Miyakogusa Predicted Gene

Lj0g3v0096099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0096099.1 Non Chatacterized Hit- tr|I1KDK4|I1KDK4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.14253
PE,89.36,0,TPR,Tetratricopeptide repeat; TPR_REGION,Tetratricopeptide
repeat-containing domain; CELL DIVISION C,CUFF.5325.1
         (548 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G78770.1 | Symbols: APC6 | anaphase promoting complex 6 | chr...   881   0.0  
AT3G04240.1 | Symbols: SEC | Tetratricopeptide repeat (TPR)-like...    64   3e-10
AT3G16320.1 | Symbols: CDC27a | Tetratricopeptide repeat (TPR)-l...    51   2e-06

>AT1G78770.1 | Symbols: APC6 | anaphase promoting complex 6 |
           chr1:29617421-29621273 FORWARD LENGTH=543
          Length = 543

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/540 (80%), Positives = 483/540 (89%), Gaps = 3/540 (0%)

Query: 1   MRDEEIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTNDPADIYMQAQALFLGRHYRRAFH 60
           MR+EEIEK+RGVVRDCVSKHLYSSAIFFADKVAA TNDP+DIYMQAQALFLGRHYRRAFH
Sbjct: 1   MREEEIEKIRGVVRDCVSKHLYSSAIFFADKVAALTNDPSDIYMQAQALFLGRHYRRAFH 60

Query: 61  LLNASKIVLRDLRFRYLAAKCLEELKEWDQCLSMLGEAAKVDGDGNVSATKDSNVMYLDK 120
           LLNASKIVLRDLRFRYLAAKCLEELKEWDQCL MLG+A KVD DG V   KD NV+  DK
Sbjct: 61  LLNASKIVLRDLRFRYLAAKCLEELKEWDQCLLMLGDA-KVDDDGIVYDAKDGNVIDFDK 119

Query: 121 DGEDREINISSAICFLRGKAYEALENRAQARLWYKAAIKADPLCYEALECLIENHMLTCE 180
           DGEDREINISSAICFLRGKAY AL+NR+QAR WYKAAIKADPLCYEALECLIE+HMLT E
Sbjct: 120 DGEDREINISSAICFLRGKAYGALQNRSQARQWYKAAIKADPLCYEALECLIESHMLTSE 179

Query: 181 EEANLISSLQFGSEDGWLSSFYSCLVKKHDKENVVEAKFRDLENKSCISDQSDPCFLGTL 240
           EE++L+SSLQF  EDGWLSSFYSCL+KK+DKE+ VE KF+ LEN++  S       + TL
Sbjct: 180 EESSLLSSLQFSPEDGWLSSFYSCLIKKYDKESTVELKFKKLENET--SGSVSGSSMITL 237

Query: 241 KSNTDLLACKAEYYHQCGEYQKCFELTSVLLEKDPFHLKSTLIHLAAAMELGNSNELYLL 300
            +NTDLLACKAEYYHQC EYQKCFELT+ LLEKDPFHLK TL+HLAAAMELGNSNELYL+
Sbjct: 238 ANNTDLLACKAEYYHQCCEYQKCFELTAALLEKDPFHLKCTLVHLAAAMELGNSNELYLM 297

Query: 301 SCHLVKDYPQKALSWFAVGCYYYCIKKYDQSRRYFGKATSLEGTFAPGWIGLGNAFAAQE 360
           +C+LVKDYP KALSWFAVGCYYYCIKKY ++RRYF KAT ++G+F+P  IG GN+FAAQE
Sbjct: 298 ACNLVKDYPSKALSWFAVGCYYYCIKKYAEARRYFSKATGIDGSFSPARIGYGNSFAAQE 357

Query: 361 EGDQAMSAYRTAARLFPGCHLPTLYIGMECMRTHSYKLAEQFFMQAKSICASEPLVCNEL 420
           EGDQAMSAYRTAARLFPGCHLPTLYIGME MRTHSYKLA+QFFMQAK+IC S+PLV NEL
Sbjct: 358 EGDQAMSAYRTAARLFPGCHLPTLYIGMEYMRTHSYKLADQFFMQAKAICPSDPLVYNEL 417

Query: 421 GVVAYHMKEYNKAVWWFEKTLALIPTSLCEMWEPTVVNLAHAYRKLKMYREAISYYEKAL 480
           GVVAYHMKEY KAV WFEKTLA IP++L E WEPTVVNLAHAYRKL+  REAISYYE+AL
Sbjct: 418 GVVAYHMKEYGKAVRWFEKTLAHIPSALTESWEPTVVNLAHAYRKLRKDREAISYYERAL 477

Query: 481 ALSTRSVSTYAGLAYSYHLQDDFTTAIAYYHKALWLKPDDQFCTEMLSWALVDESRRSID 540
            LST+S+STY+GLAY+YHLQ +F+ AI+YYHKALWLKPDDQFCTEML+ AL+DE +  +D
Sbjct: 478 TLSTKSLSTYSGLAYTYHLQGNFSAAISYYHKALWLKPDDQFCTEMLNVALMDECQNGVD 537


>AT3G04240.1 | Symbols: SEC | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:1114187-1120722 REVERSE
           LENGTH=977
          Length = 977

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 5/229 (2%)

Query: 291 LGNSNELYLLSCHLVKDYPQKALSWFAVGCYYYCIKKYDQSRRYFGKATSLEGTFAPGWI 350
           LG   E  +   H ++  P  A+++  +   YY   + D + R++ +A S +  F   + 
Sbjct: 270 LGRPTEAIMCYQHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYN 329

Query: 351 GLGNAFAAQEEGDQAMSAYRTAARLFPGCHLPTLYIGMECMRTHSYKLAEQFFMQAKSIC 410
            LGNA       D+A+  Y     L P        +G   M  +    A   F    ++ 
Sbjct: 330 NLGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANLGNIYMEWNMMGPASSLFKATLAVT 389

Query: 411 ASEPLVCNELGVVAYHMKEYNKAVWWFEKTLALIPTSLCEMWEPTVVNLAHAYRKLKMYR 470
                  N L ++      Y+ A+  + + L + P     +    +VN  + Y+++    
Sbjct: 390 TGLSAPFNNLAIIYKQQGNYSDAISCYNEVLRIDP-----LAADALVNRGNTYKEIGRVT 444

Query: 471 EAISYYEKALALSTRSVSTYAGLAYSYHLQDDFTTAIAYYHKALWLKPD 519
           EAI  Y  A+         +A LA +Y        AI  Y +AL L+PD
Sbjct: 445 EAIQDYMHAINFRPTMAEAHANLASAYKDSGHVEAAITSYKQALLLRPD 493



 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/301 (20%), Positives = 121/301 (40%), Gaps = 5/301 (1%)

Query: 236 FLGTLKSNTDLLACKAEYYHQCGEYQKCFELTSVLLEKDPFHLKSTLIHLAAAMELGNSN 295
           F  T + + D     A   ++ G++++  E ++++ +++P    + L+  A   +L   +
Sbjct: 45  FNKTHEGDDDARLALAHQLYKGGDFKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYD 104

Query: 296 ELYLLSCHLVKDYPQKALSWFAVGCYYYCIKKYDQSRRYFGKATSLEGTFAPGWIGLGNA 355
                +   ++  PQ A  +  +   +      D++ RY+  A  L   FA  W  L +A
Sbjct: 105 MCIARNEEALRIQPQFAECYGNMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASA 164

Query: 356 FAAQEEGDQAMSAYRTAARLFPGCHLPTLYIGMECMRTHSYKLAEQFFMQAKSICASEPL 415
           +  +    +A    + A  L P        +G           A   +++A  I  +  +
Sbjct: 165 YMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEAVRIQPTFAI 224

Query: 416 VCNELGVVAYHMKEYNKAVWWFEKTLALIPTSLCEMWEPTVVNLAHAYRKLKMYREAISY 475
             + L  +     + N+A+ ++++ + L P      +    +NL + Y+ L    EAI  
Sbjct: 225 AWSNLAGLFMESGDLNRALQYYKEAVKLKPA-----FPDAYLNLGNVYKALGRPTEAIMC 279

Query: 476 YEKALALSTRSVSTYAGLAYSYHLQDDFTTAIAYYHKALWLKPDDQFCTEMLSWALVDES 535
           Y+ AL +   S   +  +A  Y+ Q     AI +Y +AL   P        L  AL D  
Sbjct: 280 YQHALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNALKDIG 339

Query: 536 R 536
           R
Sbjct: 340 R 340


>AT3G16320.1 | Symbols: CDC27a | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:5529534-5534465 FORWARD
           LENGTH=717
          Length = 717

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 13/240 (5%)

Query: 280 STLIHLAAAMELGNSNELYLLSCHLVKDYPQKALSWFAVGCYYYCIKKYDQSRRYFGKAT 339
           + L HL   M LG       L+  L+        SW AVG  Y   K +D + + F +A 
Sbjct: 463 TVLYHLKEEMRLG------YLAQELISVDRLSPESWCAVGNCYSLRKDHDTALKMFQRAI 516

Query: 340 SLEGTFAPGWIGLGNAFAAQEEGDQAMSAYRTAARLFPGCHLPTLYIGMECMRTHSYKLA 399
            L   F       G+ FAA EE + A   YR A  +    +     +GM  +R   ++ A
Sbjct: 517 QLNERFTYAHTLCGHEFAALEEFEDAERCYRKALGIDTRHYNAWYGLGMTYLRQEKFEFA 576

Query: 400 EQFFMQAKSICASEPLVCNELGVVAYHMKEYNKAVWWFEK-TLALIPTSLCEMWEPTVVN 458
           +  F  A  I     ++    G+  +  K  ++A+   EK  L      L + ++     
Sbjct: 577 QHQFQLALQINPRSSVIMCYYGIALHESKRNDEALMMMEKAVLTDAKNPLPKYYK----- 631

Query: 459 LAHAYRKLKMYREAISYYEKALALSTRSVSTYAGLAYSYHLQDDFTTAIAYYHKALWLKP 518
            AH    L  Y +A    E+    + +  S +A L   Y+    +  A+ ++  AL L P
Sbjct: 632 -AHILTSLGDYHKAQKVLEELKECAPQESSVHASLGKIYNQLKQYDKAVLHFGIALDLSP 690