Miyakogusa Predicted Gene

Lj0g3v0095939.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0095939.2 Non Chatacterized Hit- tr|B9G4R1|B9G4R1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,75.86,6e-18,PANTOTHENATE KINASE 4,NULL; PANTOTHENATE
KINASE,NULL; Fumble,Type II pantothenate kinase,CUFF.5329.2
         (112 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32180.1 | Symbols: ATPANK2, PANK2 | pantothenate kinase 2 | ...   127   2e-30
AT4G32180.3 | Symbols: ATPANK2, PANK2 | pantothenate kinase 2 | ...   127   2e-30
AT4G32180.2 | Symbols: ATPANK2, PANK2 | pantothenate kinase 2 | ...   127   2e-30

>AT4G32180.1 | Symbols: ATPANK2, PANK2 | pantothenate kinase 2 |
           chr4:15537724-15543715 REVERSE LENGTH=901
          Length = 901

 Score =  127 bits (318), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/104 (62%), Positives = 80/104 (76%), Gaps = 8/104 (7%)

Query: 17  EEGQNKVTENKR-------THLEGERDMMAPAAGSSIHRSGSRPQLDVSKAEIQGNVEEK 69
           E+  + + +NKR         +  +++M    +G+ IHRSGSRPQLD+SKAEIQGN+EE+
Sbjct: 5   EDEYDPILDNKREAEAKSQVSVAADKNMAPSTSGTPIHRSGSRPQLDLSKAEIQGNLEER 64

Query: 70  YPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSA-DDKRK 112
            PTILLPNQSDD+SHLALDIGGSLIKL+YFSRHED S  DDKRK
Sbjct: 65  DPTILLPNQSDDISHLALDIGGSLIKLLYFSRHEDYSNDDDKRK 108


>AT4G32180.3 | Symbols: ATPANK2, PANK2 | pantothenate kinase 2 |
           chr4:15538340-15543715 REVERSE LENGTH=783
          Length = 783

 Score =  127 bits (318), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/104 (62%), Positives = 80/104 (76%), Gaps = 8/104 (7%)

Query: 17  EEGQNKVTENKR-------THLEGERDMMAPAAGSSIHRSGSRPQLDVSKAEIQGNVEEK 69
           E+  + + +NKR         +  +++M    +G+ IHRSGSRPQLD+SKAEIQGN+EE+
Sbjct: 5   EDEYDPILDNKREAEAKSQVSVAADKNMAPSTSGTPIHRSGSRPQLDLSKAEIQGNLEER 64

Query: 70  YPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSA-DDKRK 112
            PTILLPNQSDD+SHLALDIGGSLIKL+YFSRHED S  DDKRK
Sbjct: 65  DPTILLPNQSDDISHLALDIGGSLIKLLYFSRHEDYSNDDDKRK 108


>AT4G32180.2 | Symbols: ATPANK2, PANK2 | pantothenate kinase 2 |
           chr4:15538340-15543715 REVERSE LENGTH=783
          Length = 783

 Score =  127 bits (318), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/104 (62%), Positives = 80/104 (76%), Gaps = 8/104 (7%)

Query: 17  EEGQNKVTENKR-------THLEGERDMMAPAAGSSIHRSGSRPQLDVSKAEIQGNVEEK 69
           E+  + + +NKR         +  +++M    +G+ IHRSGSRPQLD+SKAEIQGN+EE+
Sbjct: 5   EDEYDPILDNKREAEAKSQVSVAADKNMAPSTSGTPIHRSGSRPQLDLSKAEIQGNLEER 64

Query: 70  YPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSA-DDKRK 112
            PTILLPNQSDD+SHLALDIGGSLIKL+YFSRHED S  DDKRK
Sbjct: 65  DPTILLPNQSDDISHLALDIGGSLIKLLYFSRHEDYSNDDDKRK 108