Miyakogusa Predicted Gene

Lj0g3v0095389.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0095389.1 11549_g.1
         (155 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53840.1 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    52   1e-07
AT4G09920.1 | Symbols:  | FBD, F-box and Leucine Rich Repeat dom...    50   7e-07
AT5G22720.1 | Symbols:  | F-box/RNI-like superfamily protein | c...    50   8e-07
AT5G22720.2 | Symbols:  | F-box/RNI-like superfamily protein | c...    50   8e-07
AT1G06630.2 | Symbols:  | F-box/RNI-like superfamily protein | c...    50   9e-07
AT1G06630.1 | Symbols:  | F-box/RNI-like superfamily protein | c...    49   9e-07
AT1G06630.3 | Symbols:  | F-box/RNI-like superfamily protein | c...    49   1e-06
AT5G44490.1 | Symbols:  | FBD, F-box, Skp2-like and Leucine Rich...    49   1e-06
AT4G10400.2 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    49   2e-06
AT4G10400.1 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    49   2e-06
AT5G60610.1 | Symbols:  | F-box/RNI-like superfamily protein | c...    48   2e-06
AT1G51370.2 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    48   3e-06
AT5G38590.1 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    48   3e-06
AT1G51370.3 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    48   3e-06
AT1G51370.1 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    48   3e-06
AT5G38590.2 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    47   3e-06
AT4G10420.1 | Symbols:  | FBD / Leucine Rich Repeat domains cont...    46   9e-06

>AT5G53840.1 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr5:21859148-21860672
           REVERSE LENGTH=444
          Length = 444

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 32  WVEVAKRHPIESLDIYTAGCA---TVSPSIFSSRTLVVLKLTSIGMVGNVLSVDLPSLKT 88
           W+++  RH I+ +DI    C+    +  S+++  TLV LKL+ + MV NV  V LP LK 
Sbjct: 108 WIDLVTRHRIQHIDISVFTCSGFGVIPLSLYTCDTLVHLKLSRVTMV-NVEFVSLPCLKI 166

Query: 89  LHLSQVMFQKRDDFKKLLYGAPILQDL 115
           L L  V F       K++  +P+L++L
Sbjct: 167 LDLDFVNFTNETTLDKIISCSPVLEEL 193


>AT4G09920.1 | Symbols:  | FBD, F-box and Leucine Rich Repeat
           domains containing protein | chr4:6224691-6225905
           FORWARD LENGTH=316
          Length = 316

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)

Query: 32  WVEVAKRHPIESLDIYTAGCA----TVSPSIFSSRTLVVLKLTSIGMVGNVLSVDLPSLK 87
           WV VA    I  L IY++        +  S+++ ++LV+LKL    ++     V LPSLK
Sbjct: 95  WVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLK 154

Query: 88  TLHLSQVMFQKRDDFKKLLYGAPILQDLYLAFVNSE 123
           TL L  V + K+   ++LL   P+L+DL++  +  +
Sbjct: 155 TLELKGVRYFKQGSLQRLLCNCPVLEDLFVLLLRCD 190


>AT5G22720.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr5:7547797-7551174 REVERSE LENGTH=642
          Length = 642

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 3   FPREQHHPIKNLVLYLNSTGSDEAFTFHEWVEVAKRHPIESLDI----YTAGCATVSP-S 57
           F REQ   +  L L +   G ++      W++      ++ LD+        C  V P S
Sbjct: 88  FSREQKLCLHKLKLSIRK-GENDQDCVTRWIDFVATPKLKHLDVEIGPTRCECFEVIPLS 146

Query: 58  IFSSRTLVVLKLTSIGMVGNVLSVDLPSLKTLHLSQVMFQKRDDFKKLLYGAPILQDL 115
           ++S  +L+ L+L  + + G   SV LP LKT+ L Q ++    D + L+   P+L+DL
Sbjct: 147 LYSCESLLYLRLNHVCL-GKFESVSLPCLKTMSLEQNIYANEADLESLISTCPVLEDL 203


>AT5G22720.2 | Symbols:  | F-box/RNI-like superfamily protein |
           chr5:7547797-7551174 REVERSE LENGTH=675
          Length = 675

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 3   FPREQHHPIKNLVLYLNSTGSDEAFTFHEWVEVAKRHPIESLDI----YTAGCATVSP-S 57
           F REQ   +  L L +   G ++      W++      ++ LD+        C  V P S
Sbjct: 88  FSREQKLCLHKLKLSIRK-GENDQDCVTRWIDFVATPKLKHLDVEIGPTRCECFEVIPLS 146

Query: 58  IFSSRTLVVLKLTSIGMVGNVLSVDLPSLKTLHLSQVMFQKRDDFKKLLYGAPILQDL 115
           ++S  +L+ L+L  + + G   SV LP LKT+ L Q ++    D + L+   P+L+DL
Sbjct: 147 LYSCESLLYLRLNHVCL-GKFESVSLPCLKTMSLEQNIYANEADLESLISTCPVLEDL 203


>AT1G06630.2 | Symbols:  | F-box/RNI-like superfamily protein |
           chr1:2028071-2029442 FORWARD LENGTH=403
          Length = 403

 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 12/137 (8%)

Query: 9   HPIKNLVLYLNSTGSDE--AFTFHEWV-EVAKRHPIES-LDIYTAGCATVSPSIFSSRTL 64
           +PI+ L L  +    DE        W+  V  R   E  L I   G   +SP + + +TL
Sbjct: 90  YPIRKLSLKCHVGRDDEQRKACVGRWISNVVGRGVSEVVLRINDRGLHFLSPQLLTCKTL 149

Query: 65  VVLKLTSIGMVGNVLS-VDLPSLKTLHLSQVMFQKRDDFKKL----LYGAPILQDLYLAF 119
           V L L +   +G + S V LPSLK L +  V F   DDF +L    L G P+++ LYL  
Sbjct: 150 VKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFF---DDFGELSNVLLAGCPVVEALYLNQ 206

Query: 120 VNSEIPYTTGSKILPKL 136
               +PYT  S  L +L
Sbjct: 207 NGESMPYTISSPTLKRL 223


>AT1G06630.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr1:2028071-2031173 FORWARD LENGTH=477
          Length = 477

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 12/137 (8%)

Query: 9   HPIKNLVLYLNSTGSDE--AFTFHEWV-EVAKRHPIES-LDIYTAGCATVSPSIFSSRTL 64
           +PI+ L L  +    DE        W+  V  R   E  L I   G   +SP + + +TL
Sbjct: 90  YPIRKLSLKCHVGRDDEQRKACVGRWISNVVGRGVSEVVLRINDRGLHFLSPQLLTCKTL 149

Query: 65  VVLKLTSIGMVGNVLS-VDLPSLKTLHLSQVMFQKRDDFKKL----LYGAPILQDLYLAF 119
           V L L +   +G + S V LPSLK L +  V F   DDF +L    L G P+++ LYL  
Sbjct: 150 VKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFF---DDFGELSNVLLAGCPVVEALYLNQ 206

Query: 120 VNSEIPYTTGSKILPKL 136
               +PYT  S  L +L
Sbjct: 207 NGESMPYTISSPTLKRL 223


>AT1G06630.3 | Symbols:  | F-box/RNI-like superfamily protein |
           chr1:2028071-2030344 FORWARD LENGTH=461
          Length = 461

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 65/137 (47%), Gaps = 12/137 (8%)

Query: 9   HPIKNLVLYLNSTGSDE--AFTFHEWV-EVAKRHPIES-LDIYTAGCATVSPSIFSSRTL 64
           +PI+ L L  +    DE        W+  V  R   E  L I   G   +SP + + +TL
Sbjct: 90  YPIRKLSLKCHVGRDDEQRKACVGRWISNVVGRGVSEVVLRINDRGLHFLSPQLLTCKTL 149

Query: 65  VVLKLTSIGMVGNVLS-VDLPSLKTLHLSQVMFQKRDDFKKL----LYGAPILQDLYLAF 119
           V L L +   +G + S V LPSLK L +  V F   DDF +L    L G P+++ LYL  
Sbjct: 150 VKLTLGTRLFLGKLPSYVSLPSLKFLFIHSVFF---DDFGELSNVLLAGCPVVEALYLNQ 206

Query: 120 VNSEIPYTTGSKILPKL 136
               +PYT  S  L +L
Sbjct: 207 NGESMPYTISSPTLKRL 223


>AT5G44490.1 | Symbols:  | FBD, F-box, Skp2-like and Leucine Rich
           Repeat domains containing protein |
           chr5:17924035-17925843 FORWARD LENGTH=455
          Length = 455

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 23  SDEAFTFHEWVEVAKRHPIESLDI----YTAGCATVSP-SIFSSRTLVVLKLTSIGMVGN 77
           +D       W+     H ++ LD+    +   C  V P +++ ++TL  L+L  + ++GN
Sbjct: 103 NDNKSCVTRWIGFVATHKLKHLDVECLLWKKKCLEVMPLTLYITQTLFYLRLHRV-LLGN 161

Query: 78  VLSVDLPSLKTLHLSQVMFQKRDDFKKLLYGAPILQDL 115
           V S+ LP LKT+HL Q ++      +  +   P+L+DL
Sbjct: 162 VESISLPCLKTMHLEQNVYANETCLEFFISSCPVLEDL 199


>AT4G10400.2 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr4:6446335-6447715
           REVERSE LENGTH=409
          Length = 409

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 5/116 (4%)

Query: 32  WVEVAKRHPIESLDIYTAGCAT----VSPSIFSSRTLVVLKLTSIGMVGNVLSVDLPSLK 87
           WV VA    I  L IY++        +  S+++ ++LV+LKL    ++     V LPSLK
Sbjct: 95  WVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLK 154

Query: 88  TLHLSQVMFQKRDDFKKLLYGAPILQDLYLAFVNSEIPYTTGSKILPKLVKLHLDT 143
           TL L  V + K+   ++LL   P+L+DL +   + +      + I+P L +L L T
Sbjct: 155 TLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHD-NMGKLTVIVPSLQRLSLST 209


>AT4G10400.1 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr4:6446335-6447715
           REVERSE LENGTH=409
          Length = 409

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 5/116 (4%)

Query: 32  WVEVAKRHPIESLDIYTAGCAT----VSPSIFSSRTLVVLKLTSIGMVGNVLSVDLPSLK 87
           WV VA    I  L IY++        +  S+++ ++LV+LKL    ++     V LPSLK
Sbjct: 95  WVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLK 154

Query: 88  TLHLSQVMFQKRDDFKKLLYGAPILQDLYLAFVNSEIPYTTGSKILPKLVKLHLDT 143
           TL L  V + K+   ++LL   P+L+DL +   + +      + I+P L +L L T
Sbjct: 155 TLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHD-NMGKLTVIVPSLQRLSLST 209


>AT5G60610.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr5:24364049-24365386 FORWARD LENGTH=388
          Length = 388

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 9/126 (7%)

Query: 25  EAFTFHE---WVEVAKRHPIESLDI-----YTAGCATVSPSIFSSRTLVVLKLTSIGMVG 76
           E+F F +   W  +A  H +  L I     Y      +  S+++ ++LV LKL  +G+  
Sbjct: 78  ESFLFQDIKLWGGIAISHCLRELRIDFFSHYANPYVILPRSLYTCKSLVTLKLLGLGIRV 137

Query: 77  NV-LSVDLPSLKTLHLSQVMFQKRDDFKKLLYGAPILQDLYLAFVNSEIPYTTGSKILPK 135
           +V   V LPSLKTL L  V + + D  + LL   P+L+DL +   ++         I+P 
Sbjct: 138 DVPRDVCLPSLKTLLLQCVAYSEEDPLRLLLSCCPVLEDLVIELDDANQNVKALVVIVPT 197

Query: 136 LVKLHL 141
           L  L L
Sbjct: 198 LQCLSL 203


>AT1G51370.2 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr1:19045615-19046748
           FORWARD LENGTH=346
          Length = 346

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 25  EAFTFHEWVEVAKRHPIESLDIYTAGCATVSPSIFSSRTLVVLKLTSIGMVGNVLSVDLP 84
           + +    W++ A    I+ LD++      +  SI++  TLV L+L    ++ N   V LP
Sbjct: 102 DKYDLMSWIDAATTRRIQHLDVHCFHDNKIPLSIYTCTTLVHLRL-RWAVLTNPEFVSLP 160

Query: 85  SLKTLHLSQVMFQKRDDFKKLLYGAPILQDLYL 117
            LK +H   V +      +KL+ G+P+L++L L
Sbjct: 161 CLKIMHFENVSYPNETTLQKLISGSPVLEELIL 193


>AT5G38590.1 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr5:15452586-15453455
           REVERSE LENGTH=289
          Length = 289

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 29  FHEWVEVAKRHPIESLDI--YTAGCATVSPSIFSSRTLVVLKLTSIGMVGNVLSVDLPSL 86
              W+E+A    +  LDI  ++        S F+ ++LV LKL S+ +      V LPSL
Sbjct: 92  IRRWIEIAVSRHVHDLDIDHFSENENIFLSSFFACKSLVTLKLRSVTLRDIPSMVCLPSL 151

Query: 87  KTLHLSQVMFQKRDDFKKLLYGAPILQDL 115
           KTL L  V F +    ++LL   P+L+DL
Sbjct: 152 KTLLLDNVSFVEGKSLQELLSICPVLEDL 180


>AT1G51370.3 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr1:19045615-19047141
           FORWARD LENGTH=413
          Length = 413

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 25  EAFTFHEWVEVAKRHPIESLDIYTAGCATVSPSIFSSRTLVVLKLTSIGMVGNVLSVDLP 84
           + +    W++ A    I+ LD++      +  SI++  TLV L+L    ++ N   V LP
Sbjct: 102 DKYDLMSWIDAATTRRIQHLDVHCFHDNKIPLSIYTCTTLVHLRL-RWAVLTNPEFVSLP 160

Query: 85  SLKTLHLSQVMFQKRDDFKKLLYGAPILQDLYL 117
            LK +H   V +      +KL+ G+P+L++L L
Sbjct: 161 CLKIMHFENVSYPNETTLQKLISGSPVLEELIL 193


>AT1G51370.1 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr1:19045615-19047141
           FORWARD LENGTH=435
          Length = 435

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%)

Query: 25  EAFTFHEWVEVAKRHPIESLDIYTAGCATVSPSIFSSRTLVVLKLTSIGMVGNVLSVDLP 84
           + +    W++ A    I+ LD++      +  SI++  TLV L+L    ++ N   V LP
Sbjct: 102 DKYDLMSWIDAATTRRIQHLDVHCFHDNKIPLSIYTCTTLVHLRL-RWAVLTNPEFVSLP 160

Query: 85  SLKTLHLSQVMFQKRDDFKKLLYGAPILQDLYL 117
            LK +H   V +      +KL+ G+P+L++L L
Sbjct: 161 CLKIMHFENVSYPNETTLQKLISGSPVLEELIL 193


>AT5G38590.2 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr5:15452066-15453455
           REVERSE LENGTH=410
          Length = 410

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 29  FHEWVEVAKRHPIESLDI--YTAGCATVSPSIFSSRTLVVLKLTSIGMVGNVLSVDLPSL 86
              W+E+A    +  LDI  ++        S F+ ++LV LKL S+ +      V LPSL
Sbjct: 92  IRRWIEIAVSRHVHDLDIDHFSENENIFLSSFFACKSLVTLKLRSVTLRDIPSMVCLPSL 151

Query: 87  KTLHLSQVMFQKRDDFKKLLYGAPILQDL 115
           KTL L  V F +    ++LL   P+L+DL
Sbjct: 152 KTLLLDNVSFVEGKSLQELLSICPVLEDL 180


>AT4G10420.1 | Symbols:  | FBD / Leucine Rich Repeat domains
           containing protein | chr4:6453085-6454209 REVERSE
           LENGTH=322
          Length = 322

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 6/89 (6%)

Query: 32  WVEVAKRHPIESLDIYTAGC-----ATVSPSIFSSRTLVVLKLTSIGMVGNVLSVDLPSL 86
           WV V     +  L+IY++ C       +  S+++ ++LV+LKL    ++     V LPSL
Sbjct: 2   WVVVVLSRYVRELEIYSS-CYQDKQNILPSSLYTCKSLVILKLNGGILMDVPRMVCLPSL 60

Query: 87  KTLHLSQVMFQKRDDFKKLLYGAPILQDL 115
           KTL L  V + K++  ++LL   P+L+DL
Sbjct: 61  KTLVLKGVNYFKQESLQRLLSNCPVLEDL 89