Miyakogusa Predicted Gene
- Lj0g3v0095179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0095179.1 tr|B9IIE5|B9IIE5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_576428 PE=4
SV=1,24.46,0.00000008,PPR,Pentatricopeptide repeat; PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
coiled-,gene.g7263.t1.1
(364 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 1e-85
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 8e-54
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 5e-45
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 6e-43
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 3e-35
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 121 7e-28
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 121 7e-28
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 121 7e-28
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 7e-21
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 61 1e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 4e-09
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 7e-09
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 7e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 58 8e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 56 4e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 7e-08
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 5e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 51 1e-06
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 51 1e-06
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 50 3e-06
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-06
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 9e-06
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 313 bits (802), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 212/336 (63%), Gaps = 8/336 (2%)
Query: 9 ILRHKFQNLTANFQLLRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAI 68
ILR NL A+ R T K+ LYS+ISPLGDP SV P L+ WVQ G +
Sbjct: 3 ILRRIPANLIAS-------RYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKV 55
Query: 69 KEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESY 128
+L IV LR RKRF HAL+VS+WM+ G+C SP + AV L LIGRV+G +AE Y
Sbjct: 56 SVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEY 115
Query: 129 FQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSD 187
F+NL + K +K +GALLNCYVR V+KSL +KMKEMG+V S L YNNIMCLY
Sbjct: 116 FENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIG 175
Query: 188 QHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTY 247
QHEKVP VL MKE+ V+PD +SYR+CIN++GA DLE + L ++ER +DW TY
Sbjct: 176 QHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTY 235
Query: 248 STVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKA 307
+ A FYI G + L+K+ YNHLI+ YA L K ++RLW L+K
Sbjct: 236 AVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKD 295
Query: 308 NCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELS 343
CKR++N +Y+T+L LVK+ L EAE++L EW+ S
Sbjct: 296 VCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSS 331
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 191/349 (54%), Gaps = 14/349 (4%)
Query: 20 NFQLLR--LYRSASTT---VTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQ 74
N+ L R L+ S TT + L R++ GDPS S++ VL+ W+ QGN +K +L
Sbjct: 15 NYILRRSFLFHSGKTTPSPLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELH 74
Query: 75 LIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSD 134
I+K LR RF+HALQ+S+WMS + IS GD A++L LI +V GL AE +F+ +
Sbjct: 75 SIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPM 134
Query: 135 IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVP 193
+ ++GALLNCY ++ K+ Q+MKE+G++ CL YN ++ LY ++ ++ V
Sbjct: 135 ERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVE 194
Query: 194 GVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATF 253
+L M+++ V PDIF+ +++Y SD+E MEK L E + +DW TY+ A
Sbjct: 195 KLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANG 254
Query: 254 YIRAGXXXXXXXXXXXXXD--NLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKR 311
YI+AG N KR AY L+S Y K+ + RLW L K
Sbjct: 255 YIKAGLTEKALEMLRKSEQMVNAQKRKH-AYEVLMSFYGAAGKKEEVYRLWSLYK-ELDG 312
Query: 312 QLNGEYITLLSWLVKLGDLDEAEKLLGEWE----LSDGLSPSLFLEISC 356
N YI+++S L+K+ D++E EK++ EWE L D P L + C
Sbjct: 313 FYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYC 361
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 176/320 (55%), Gaps = 3/320 (0%)
Query: 24 LRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTR 83
+R +A T +++R+LY ++S L +V L +++ +G +++ L KTLR
Sbjct: 57 VRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKF 116
Query: 84 KRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKT-EKVH 142
+R HA ++ +WM + + S D A+ L LIG+ GLE+AE+YF NL K + +
Sbjct: 117 RRPQHAFEIFDWMEKRKMT-FSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTY 175
Query: 143 GALLNCYVRAGLVDKSLSQMQKMKEMGYVS-CLNYNNIMCLYAQSDQHEKVPGVLAMMKE 201
GAL+NCY +K+ + + M E+ +V+ L +NN+M +Y + Q EKVP ++ MK+
Sbjct: 176 GALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQ 235
Query: 202 DGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXX 261
G+SP +Y + + S G+ +DL+ +EK+++E+ ++ W T+S +A Y +AG
Sbjct: 236 RGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYE 295
Query: 262 XXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLL 321
+ ++ + +++ L+S YAG+ + R+W+ K N Y+ +L
Sbjct: 296 KADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVML 355
Query: 322 SWLVKLGDLDEAEKLLGEWE 341
+ KLGDLD +K+ EWE
Sbjct: 356 QAMSKLGDLDGIKKIFTEWE 375
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 172/303 (56%), Gaps = 2/303 (0%)
Query: 40 LYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSK 99
+Y +IS + P + VL +W + G + + +L +VK LR KR AL+V +WM+++
Sbjct: 69 IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128
Query: 100 G-LCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKS 158
G +S D A+QL LIG+V G+ AE +F L + K +V+G+LLN YVRA +K+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188
Query: 159 LSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINS 217
+ + M++ GY + L +N +M LY +++KV ++ MK+ + DI+SY + ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248
Query: 218 YGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKR 277
G+ +E ME + ++++ + +W T+ST+AT YI+ G + R
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308
Query: 278 SAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLL 337
+ + Y++L+S Y L KK + R+W + K+ N Y L+S LV++GD++ AEK+
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368
Query: 338 GEW 340
EW
Sbjct: 369 EEW 371
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 178/326 (54%), Gaps = 7/326 (2%)
Query: 32 TTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQ 91
T V R L R+ L S V + KW ++G+++++ +L IV+ LR KR+ HAL+
Sbjct: 55 TVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALE 114
Query: 92 VSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVR 151
+ EWM + + GD AV L LI ++ GL SAE +F+++ D + +LL+ YV+
Sbjct: 115 ICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQ 174
Query: 152 AGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFS 210
L DK+ + +KM E G++ SCL YN+++ +Y Q EKVP ++ +K SPDI +
Sbjct: 175 NKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVT 233
Query: 211 YRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXX 270
Y + + ++ + +D+E EK+ + + E DW+TYS + Y +
Sbjct: 234 YNLWLTAFASGNDVEGAEKVYLKAKEE-KLNPDWVTYSVLTNLYAKTDNVEKARLALKEM 292
Query: 271 XDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDL 330
+ K++ VAY LIS +A L K + WK K++ K+ + EY++++S +VKLG+
Sbjct: 293 EKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEF 352
Query: 331 DEAEKLLGEWE----LSDGLSPSLFL 352
++A+ L EWE D P+L L
Sbjct: 353 EQAKGLYDEWESVSGTGDARIPNLIL 378
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 165/315 (52%), Gaps = 3/315 (0%)
Query: 29 SASTTVTKRRDLYSRISPLGD-PSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFT 87
S T K R +Y ++S LG + L ++V +G +K+ L K LR ++
Sbjct: 30 SVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQ 89
Query: 88 HALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLN 147
AL++ EWM K + + D A++L LI + GLE+AE+YF +L D K + +G+LLN
Sbjct: 90 RALEIFEWMERKEIA-FTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLN 148
Query: 148 CYVRAGLVDKSLSQMQKMKEMGYVS-CLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSP 206
CY K+ + + M ++ +VS L +NN+M +Y Q EKVP ++ MKE ++P
Sbjct: 149 CYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITP 208
Query: 207 DIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXX 266
+Y + I S G+ DL+ +EK+L+E++ EG W T++ +A YI+ G
Sbjct: 209 CDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEA 268
Query: 267 XXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVK 326
+N++ Y+ LI+ Y G+ + R+W L K N Y+T+L L K
Sbjct: 269 LKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSK 328
Query: 327 LGDLDEAEKLLGEWE 341
L D+D +K+ EWE
Sbjct: 329 LDDIDGVKKVFAEWE 343
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 170/321 (52%), Gaps = 9/321 (2%)
Query: 29 SASTTVTKR-------RDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLR 81
S S VTKR LY+R+ G V V L ++++ + + ++ +K LR
Sbjct: 7 SRSRDVTKRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLR 66
Query: 82 TRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKV 141
R + AL++SE M +G+ + D+A+ L L+ + + + E+YF +L + KTE
Sbjct: 67 NRGLYYPALKLSEVMEERGMNK-TVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELT 125
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
+G+LLNCY + L +K+ + KMKE+ S ++YN++M LY ++ + EKVP ++ +K
Sbjct: 126 YGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELK 185
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXX 260
+ V PD ++Y V + + A +D+ +E+++EE+ R+G DW TYS +A+ Y+ AG
Sbjct: 186 AENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLS 245
Query: 261 XXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITL 320
+R AY LI+ Y L + R+W+ + + N Y+ +
Sbjct: 246 QKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNM 305
Query: 321 LSWLVKLGDLDEAEKLLGEWE 341
+ LVKL DL AE L EW+
Sbjct: 306 IQVLVKLNDLPGAETLFKEWQ 326
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 174/312 (55%), Gaps = 5/312 (1%)
Query: 36 KRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEW 95
++ DL SRI L P S VLEKW+ +GN + +L+ I K LR +R+ HAL+V+EW
Sbjct: 53 EKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEW 112
Query: 96 MSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDID-KTEKVHGALLNCYVRAGL 154
M IS D A ++ LI +V G+++AE YF+ L DID KT + + +LL+ Y +
Sbjct: 113 MVQHEESKISDADYASRIDLISKVFGIDAAERYFEGL-DIDSKTAETYTSLLHAYAASKQ 171
Query: 155 VDKSLSQMQKMKEMGYVS--CLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYR 212
+++ + +++ E ++ + YN +M LY Q EKVP V+ ++K+ VSPDIF+Y
Sbjct: 172 TERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYN 231
Query: 213 VCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXD 272
+ ++S A +++ + K+LEE+ + + W+ Y + + YI + +
Sbjct: 232 LWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAE 291
Query: 273 -NLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLD 331
++ +R + Y+ L+ + GL K + ++WK + + + YI +LS + LG L
Sbjct: 292 KSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLR 351
Query: 332 EAEKLLGEWELS 343
EAE+++ +W+ S
Sbjct: 352 EAEEIIHQWKES 363
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 180/348 (51%), Gaps = 25/348 (7%)
Query: 1 MASTPFSAILRHKFQN-LTANFQLLRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLE 59
+A P+ A +QN +T + L+++ S +T D R + ++PVLE
Sbjct: 13 LAKRPYGA-----YQNVITVSMSWLKIHGSCPHRIT---DALHR-------NAQIIPVLE 57
Query: 60 KWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRV 119
+W QQGN + +++I+K LR + ALQVSEWMS + +C + P D A +L LI V
Sbjct: 58 QWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLIENV 117
Query: 120 HGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSL----SQMQKMKEMG-YVSCL 174
GLE AE +F+++ + + V+ +LLN Y R+ DK+L + QKM+++G + +
Sbjct: 118 VGLEEAEKFFESIPKNARGDSVYTSLLNSYARS---DKTLCKAEATFQKMRDLGLLLRPV 174
Query: 175 NYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEI 234
YN +M LY+ EKV +L MK++ V D + + Y A D+ MEK L +
Sbjct: 175 PYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKW 234
Query: 235 EREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRS-AVAYNHLISHYAGLE 293
E ++W T +A Y+RA +D++S AY+HL+ Y
Sbjct: 235 EGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAG 294
Query: 294 MKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWE 341
++ ++R+WKL K+ + N Y T++ L+K+ D+ AE++ WE
Sbjct: 295 NREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWE 342
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 35/178 (19%)
Query: 54 VVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQL 113
V P+LE+W G+ +K L+ ++K LR K+F+ ALQVSEWM K +C + D A +L
Sbjct: 387 VTPLLEQW---GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARL 443
Query: 114 GLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSC 173
L V GLE AE YF+N+ + K V+ ALL+ Y ++ DK+L M
Sbjct: 444 YLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKS---DKNLGNM----------- 489
Query: 174 LNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLL 231
V +L M+E+ V PD+ + + Y A S ++ ME +
Sbjct: 490 ------------------VDEILREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFM 529
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 173/318 (54%), Gaps = 6/318 (1%)
Query: 29 SASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTH 88
S +++V R L + G P SV +L++ + G+A+ +L+LI K L R+
Sbjct: 30 SDTSSVANRNSLKEILRKNG-PRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDL 88
Query: 89 ALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGA---- 144
ALQ+ EWM ++ S D A++L LI + HGL+ E YF+ L + +V +
Sbjct: 89 ALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLP 148
Query: 145 LLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDG 203
LL YV+ +V ++ + M+K+ +G+ V+ +N +M LY S Q+EKV V++MMK +
Sbjct: 149 LLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNK 208
Query: 204 VSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXX 263
+ ++ SY + +N+ S + +E + +E+ + V W + T+A YI++G
Sbjct: 209 IPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKA 268
Query: 264 XXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSW 323
L++ + + Y LI+ YA L K+ ++RLW++ K+ C R YI +LS
Sbjct: 269 RLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSS 328
Query: 324 LVKLGDLDEAEKLLGEWE 341
LVK GDL+EAE++ EWE
Sbjct: 329 LVKTGDLEEAERVFSEWE 346
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 142/268 (52%), Gaps = 9/268 (3%)
Query: 96 MSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLV 155
MS + IS GD A++L LI +V GL AE +F+ + + ++GALLNCY ++
Sbjct: 1 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60
Query: 156 DKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVC 214
K+ Q+MKE+G++ CL YN ++ LY ++ ++ V +L M+++ V PDIF+
Sbjct: 61 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120
Query: 215 INSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXD-- 272
+++Y SD+E MEK L E + +DW TY+ A YI+AG
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 180
Query: 273 NLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDE 332
N KR AY L+S Y K+ + RLW L K N YI+++S L+K+ D++E
Sbjct: 181 NAQKRKH-AYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEE 238
Query: 333 AEKLLGEWE----LSDGLSPSLFLEISC 356
EK++ EWE L D P L + C
Sbjct: 239 VEKIMEEWEAGHSLFDIRIPHLLITGYC 266
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 158/311 (50%), Gaps = 10/311 (3%)
Query: 29 SASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTH 88
S T K+ +L+ I + P +S+ L+KWV++GN I ++ + LR R+ +
Sbjct: 121 SRKTVEKKQSELFKTI--VSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGR 178
Query: 89 ALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNC 148
ALQ+SEW+ + ++ D A +L L ++ GLE E+ Q + K E ++ LL
Sbjct: 179 ALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLAN 238
Query: 149 YVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPD 207
V AG V KS KMK++G+ +S + ++ L+ + D+ +K+ VL +M+++ + P
Sbjct: 239 CVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPS 297
Query: 208 IFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXX 267
+ +Y++ I+ GA +D+ ME++LE ++ EG +D+ T + A Y AG
Sbjct: 298 LLTYKILIDVKGATNDISGMEQILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVL 356
Query: 268 XXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCK-RQLNGEYITLLSWLVK 326
+ + A+ L+S YA L + + R+WK+ C+ + E + + K
Sbjct: 357 KEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI----CESKPYFEESLAAIQAFGK 412
Query: 327 LGDLDEAEKLL 337
L + EAE +
Sbjct: 413 LNKVQEAEAIF 423
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 158/311 (50%), Gaps = 10/311 (3%)
Query: 29 SASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTH 88
S T K+ +L+ I + P +S+ L+KWV++GN I ++ + LR R+ +
Sbjct: 121 SRKTVEKKQSELFKTI--VSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGR 178
Query: 89 ALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNC 148
ALQ+SEW+ + ++ D A +L L ++ GLE E+ Q + K E ++ LL
Sbjct: 179 ALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLAN 238
Query: 149 YVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPD 207
V AG V KS KMK++G+ +S + ++ L+ + D+ +K+ VL +M+++ + P
Sbjct: 239 CVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPS 297
Query: 208 IFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXX 267
+ +Y++ I+ GA +D+ ME++LE ++ EG +D+ T + A Y AG
Sbjct: 298 LLTYKILIDVKGATNDISGMEQILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVL 356
Query: 268 XXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCK-RQLNGEYITLLSWLVK 326
+ + A+ L+S YA L + + R+WK+ C+ + E + + K
Sbjct: 357 KEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI----CESKPYFEESLAAIQAFGK 412
Query: 327 LGDLDEAEKLL 337
L + EAE +
Sbjct: 413 LNKVQEAEAIF 423
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 158/311 (50%), Gaps = 10/311 (3%)
Query: 29 SASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTH 88
S T K+ +L+ I + P +S+ L+KWV++GN I ++ + LR R+ +
Sbjct: 121 SRKTVEKKQSELFKTI--VSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGR 178
Query: 89 ALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNC 148
ALQ+SEW+ + ++ D A +L L ++ GLE E+ Q + K E ++ LL
Sbjct: 179 ALQMSEWLEANKKIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLAN 238
Query: 149 YVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPD 207
V AG V KS KMK++G+ +S + ++ L+ + D+ +K+ VL +M+++ + P
Sbjct: 239 CVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPS 297
Query: 208 IFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXX 267
+ +Y++ I+ GA +D+ ME++LE ++ EG +D+ T + A Y AG
Sbjct: 298 LLTYKILIDVKGATNDISGMEQILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVL 356
Query: 268 XXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCK-RQLNGEYITLLSWLVK 326
+ + A+ L+S YA L + + R+WK+ C+ + E + + K
Sbjct: 357 KEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKI----CESKPYFEESLAAIQAFGK 412
Query: 327 LGDLDEAEKLL 337
L + EAE +
Sbjct: 413 LNKVQEAEAIF 423
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 117/208 (56%), Gaps = 5/208 (2%)
Query: 53 SVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQ 112
SV VLEKWV++G + + ++ L + LR RK + LQ+ EW+ + + + A Q
Sbjct: 156 SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQ 215
Query: 113 LGLIGRVHGLESAESYFQNLSDIDKTEKVHGALL-NCYVRAGLVDKSLSQMQKMKEMGY- 170
L L+ +VH L+ AE + +++ + + E V+ LL NC ++ V+K+ KMKE+ +
Sbjct: 216 LDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHH-VNKAEDIFNKMKELKFP 274
Query: 171 VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKL 230
S N ++ LY+ D+ +K+ VL +M+ + + P +Y INS G D+ MEK+
Sbjct: 275 TSVFACNQLLLLYSMHDR-KKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKI 333
Query: 231 LEEIEREGHTCVDWMTYSTVATFYIRAG 258
+E I+ EG +D S +A +YIRAG
Sbjct: 334 VETIKEEG-IELDPELQSILAKYYIRAG 360
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 144/282 (51%), Gaps = 9/282 (3%)
Query: 52 VSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAV 111
+SV L+KWV+QG K+ + + LR R+ F ALQ++EW+ + D A
Sbjct: 140 LSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYAC 199
Query: 112 QLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY- 170
+L LI +V G E+Y + + + + E V+ LL +V V + + KMK++G+
Sbjct: 200 RLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFP 259
Query: 171 VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKL 230
+S N ++ LY + D+ +K+ VL +++++ + P++ +Y++ I++ G+ +D+ ME++
Sbjct: 260 LSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQI 318
Query: 231 LEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYA 290
+E ++ EG +D + +A Y AG + + L+S Y
Sbjct: 319 VETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYG 377
Query: 291 GLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDE 332
L+ + + R+WK+ C+ N Y +L+ ++ G +D+
Sbjct: 378 YLQREDEVRRVWKI----CEE--NPRYNEVLAAILAFGKIDK 413
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 101 LCPISPGDRAVQLGLI--GRVHGLESAESYFQNLSDIDK--TEKVHGALLNCYVRAGLVD 156
+C +P V ++ G++ ++ AE+ F+ + + + V+ LL YV +V
Sbjct: 391 ICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVS 450
Query: 157 KSLSQMQKMKEMG-YVSCLNYNNIMCLYAQSDQHEKVPGVLA-MMKEDGVSPDIFSYRVC 214
+ +++M + G + L ++ ++ LY ++ + EK L+ ++ + P + S+
Sbjct: 451 EGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQSKQIKPLMSSFMYL 510
Query: 215 INSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRA 257
++ Y R D+ N EK+ + +++ G+ W Y T+ Y+ A
Sbjct: 511 MHEYVRRGDVHNTEKIFQRMKQAGYQSRFW-AYQTLIQAYVNA 552
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 117/223 (52%), Gaps = 6/223 (2%)
Query: 41 YSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKG 100
+SRI LG V P L++W+++G + L+ ++ +L +RF HALQVSEW++ +G
Sbjct: 36 HSRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRG 95
Query: 101 LCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYV---RAGLVDK 157
+ +S D A +L L+ GL+ AE +F+++ + + + VH LL+ Y + +
Sbjct: 96 IFDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAE 155
Query: 158 SLSQMQKMKEMGYVSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDI-FSYRVCIN 216
+ Q +++ M + Y +++ LYA + + +L MKE+GV D + +
Sbjct: 156 ATYQTMRVQNM-LLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLK 214
Query: 217 SYGARSDLENMEKLLEEIE-REGHTCVDWMTYSTVATFYIRAG 258
+Y + D+E ME L +E E + W T ++A Y++ G
Sbjct: 215 AYASLPDVEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGG 257
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 122/233 (52%), Gaps = 9/233 (3%)
Query: 28 RSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFT 87
RS T + L SRI + S++P+LE+W +QG + L+ ++K L K FT
Sbjct: 26 RSYETLPAANQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFT 85
Query: 88 HALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLN 147
AL+ S+WM + P D A QL L+ V GLE AE F+N I + + + LL+
Sbjct: 86 TALEASKWMFKHSVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKN---IPEKMRDYSVLLS 142
Query: 148 CYVR-AGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVS 205
Y + VDK+ + +KM+E+G+ + +N+++CLY Q + + V +L +K++ +
Sbjct: 143 SYTKPVRTVDKAEATFKKMRELGFLLKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNM- 201
Query: 206 PDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
++ S +V N +++ MEK + +EG ++ T +A Y RAG
Sbjct: 202 -EVGSLKVN-NVSRVYANINAMEKFKTWVSKEG-IELERDTIVAMAKAYHRAG 251
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 40/277 (14%)
Query: 73 LQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNL 132
L+ IV+ LR+ R AL+VS+WM + + + P D + + L +V LE AE +F+++
Sbjct: 78 LRGIVEKLRSSNRPRQALEVSDWMVEQKMYNL-PEDFSARFHLTEKVLNLEEAEKFFESI 136
Query: 133 SDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCLN-----YNNIMCLYAQSD 187
+ + E ++ +LL Y R +K+L + + + + L YN++ LY+
Sbjct: 137 PENMRFESMYNSLLRSYARQS-GEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLG 195
Query: 188 QHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTY 247
+KV +L MKE+ V D + + Y A SD+ M+K L +R+ T +D +T
Sbjct: 196 NRDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL--ADRKEITRLDGLTM 253
Query: 248 STVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKA 307
+A Y L+S Y + + R+W KA
Sbjct: 254 LAMAKAY-----------------------------ELMSLYGEAGEIEDVHRVWDKYKA 284
Query: 308 NCKRQLNGEYITLLSWLVKLGDLDEAEKL-LGEWELS 343
+++ N E+ TL+ L+KLGD AEK+ EWE S
Sbjct: 285 -TRQKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECS 320
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 99/183 (54%), Gaps = 3/183 (1%)
Query: 51 SVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRA 110
+ + +LE+ ++GN + L+ ++K LR + + AL+ S WM K + + D A
Sbjct: 359 ATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYA 418
Query: 111 VQLGLIGRVHGLESAESYFQ-NLSDIDKTEKVHGALLNCYVRAGLV-DKSLSQMQKMKEM 168
+L L +V GLE AE++F+ ++ + K V+ LL+CY R+ K+ + +KM+E+
Sbjct: 419 TRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMREL 478
Query: 169 GYVSCLN-YNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENM 227
G S L+ +N+++ LY+ + V +L MK + PDI + + + +++M
Sbjct: 479 GLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAIDSM 538
Query: 228 EKL 230
EK+
Sbjct: 539 EKV 541
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 129/299 (43%), Gaps = 3/299 (1%)
Query: 52 VSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAV 111
V+V L+ W+ G + + + LR R AL++ EW+ + + + +
Sbjct: 79 VTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYSY 138
Query: 112 QLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY- 170
L ++HG+ E F + + E ++ L+ + G++ +L M+KM+E+GY
Sbjct: 139 LLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYR 198
Query: 171 VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKL 230
S L YN ++ + + + + LA+MK D +P + +Y + + +++ + K
Sbjct: 199 TSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKA 258
Query: 231 LEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYA 290
+ +++ G + ++Y +A + A ++ + + L+ Y
Sbjct: 259 FDGMKKAG-VEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYG 317
Query: 291 GLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSPS 349
L +K + R W + + + Y+ ++G+LD AE+L E + GL +
Sbjct: 318 RLGKEKELARTWNVIRG-FHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKET 375
>AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3558495-3560078 FORWARD
LENGTH=359
Length = 359
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 85 RFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGA 144
R AL+VS+WM +C + P D + + LI V GLE AE YF+++ + + E ++ A
Sbjct: 55 RLHQALEVSDWMIEHKICCLVPEDFSARFQLIENVLGLEEAEKYFESIPENLRGESLYTA 114
Query: 145 LLNCYVRAGLVDKSLSQMQKMKEMGYVSCLNYNNIMCLYAQSDQ-------HEKVPGVLA 197
LL Y K E Y+ + ++ Q D+ +KV L
Sbjct: 115 LLRSYA-------------KRSEKKYL-----DRASRIHIQEDERISSFGTRDKVDESLR 156
Query: 198 MMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWM 245
MKE + D + + Y A SD+ ME+ L + EG +D M
Sbjct: 157 EMKESNIDLDRLTVNKALRVYAAASDVAAMERFLADW--EGTVKLDLM 202
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 73 LQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNL 132
L+VK+ AL + + G P AV I + AE+ F+ +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 133 --SDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQH 189
S + + L+ + AG +D +L+ KM+ G + + + YN ++ Y + +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 190 EKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYST 249
+ +L M G+ P++ SY V IN ++ + +L E+ R G++ +D +TY+T
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS-LDEVTYNT 315
Query: 250 VATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLI-SHYAGLEMKKAMMRLWKLQ-KA 307
+ Y + G + S + Y LI S M +AM L +++ +
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 308 NCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSPSL 350
C + Y TL+ + G ++EA ++L E +G SPS+
Sbjct: 376 LCPNERT--YTTLVDGFSQKGYMNEAYRVLREMN-DNGFSPSV 415
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 120/286 (41%), Gaps = 8/286 (2%)
Query: 75 LIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSD 134
L+ L K+ HALQ W GL + ++G V L A ++ +
Sbjct: 119 LVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPE 178
Query: 135 --IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCL-NYNNIMCLYAQSDQHEK 191
+ E + L+ Y +AG+V +S+ QKMK++G + +YN++ + + ++
Sbjct: 179 KGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMM 238
Query: 192 VPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVA 251
M +GV P +Y + + + LE + E+++ G D T++T+
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG-ISPDDATFNTMI 297
Query: 252 TFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKR 311
+ R N S V+Y +I Y ++ +R+++ +++
Sbjct: 298 NGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIE 357
Query: 312 QLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSP---SLFLEI 354
Y TLL L G + EA+ +L ++ ++P S+FL++
Sbjct: 358 PNATTYSTLLPGLCDAGKMVEAKNILKNM-MAKHIAPKDNSIFLKL 402
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 7/299 (2%)
Query: 47 LGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISP 106
+G P + ++EK G A ++ + A QV E M + G
Sbjct: 256 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 315
Query: 107 GDRAVQLGLIGRVHGLESAESYFQN--LSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQK 164
A+ L + G+ H + A L+ + + +L++ Y R G++D+++ +
Sbjct: 316 TYNAL-LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 165 MKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSD 223
M E G Y ++ + ++ + E + M+ G P+I ++ I YG R
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 224 LENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYN 283
M K+ +EI G + D +T++T+ + + G +N
Sbjct: 435 FTEMMKIFDEINVCGLS-PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 284 HLISHYAGL-EMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWE 341
LIS Y+ ++AM ++ A L+ Y T+L+ L + G +++EK+L E E
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS-TYNTVLAALARGGMWEQSEKVLAEME 551
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 4/203 (1%)
Query: 151 RAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIF 209
+ G V + + ++E G+ + +Y +++ +A S ++ + V M+EDG P +
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLI 244
Query: 210 SYRVCINSYGARSDLEN-MEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXX 268
+Y V +N +G N + L+E+++ +G D TY+T+ T R
Sbjct: 245 TYNVILNVFGKMGTPWNKITSLVEKMKSDG-IAPDAYTYNTLITCCKRGSLHQEAAQVFE 303
Query: 269 XXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLG 328
V YN L+ Y K M++ N Y +L+S + G
Sbjct: 304 EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDG 363
Query: 329 DLDEAEKLLGEWELSDGLSPSLF 351
LDEA +L + G P +F
Sbjct: 364 MLDEAMELKNQMA-EKGTKPDVF 385
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 122 LESAESYFQNLSDIDKTEKVH--GALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNN 178
L AE F L + + + ++++ Y R +V K+ + MKE G+ S YN+
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 179 IMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREG 238
+M ++++S K +L + G+ PDI SY I +Y + + + ++ E+ G
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 239 HTCVDWMTYSTVATFY 254
D +TY+T Y
Sbjct: 730 -IVPDVITYNTFIGSY 744
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 143 GALLNCYVRAGLVDKSLSQMQKMKEMG-YVSCLNYNNIMCLYAQSDQHEKVPGVLAMMKE 201
G ++N Y G ++++L +MKE+G + + +N+++ + + + V V+ +M+E
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 202 DGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXX 261
GV PD+ ++ +N++ + D++ E++ ++ EG D +S +A Y RAG
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM-LEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 262 XXXXXXXXXXDNLDKRSAVAYNHLISHY-AGLEMKKAM 298
+ + V Y +IS + + EMKKAM
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAM 691
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
+ ++N Y R G +DK ++ MK G + Y +I+ L + + + + M
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXX 260
G+ PD Y I+ + R D+ K E+ T D +TY+ + + + + G
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT-PDVLTYTAIISGFCQIGDM 402
Query: 261 XXXXXXXXXXXDNLDKRSAVAYNHLISHY--AGLEMKKAMMRLWKLQKANCKRQLNGEYI 318
+ +V + LI+ Y AG MK A + +A C + Y
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG-HMKDAFRVHNHMIQAGCSPNVV-TYT 460
Query: 319 TLLSWLVKLGDLDEAEKLLGE-WELSDGLSPSLF 351
TL+ L K GDLD A +LL E W++ GL P++F
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKI--GLQPNIF 492
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
+ ++N Y R G +DK ++ MK G + Y +I+ L + + + + M
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXX 260
G+ PD Y I+ + R D+ K E+ T D +TY+ + + + + G
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT-PDVLTYTAIISGFCQIGDM 402
Query: 261 XXXXXXXXXXXDNLDKRSAVAYNHLISHY--AGLEMKKAMMRLWKLQKANCKRQLNGEYI 318
+ +V + LI+ Y AG MK A + +A C + Y
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG-HMKDAFRVHNHMIQAGCSPNVV-TYT 460
Query: 319 TLLSWLVKLGDLDEAEKLLGE-WELSDGLSPSLF 351
TL+ L K GDLD A +LL E W++ GL P++F
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKI--GLQPNIF 492
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 76 IVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRA--VQLGLIGRVHGLESAESYFQNLS 133
+++TLR K L+ +W+S+KG S +++ + L +GR L A ++ ++
Sbjct: 71 VLQTLRLIKVPADGLRFFDWVSNKGF---SHKEQSFFLMLEFLGRARNLNVARNFLFSIE 127
Query: 134 D-----IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSD 187
+ ++ +L+ Y AGL +S+ Q MK+MG S L +N+++ + +
Sbjct: 128 RRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRG 187
Query: 188 QHEKVPGVLAMMKED-GVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMT 246
+ + M+ GV+PD +++ IN + S ++ ++ +++E H D +T
Sbjct: 188 RTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELY-HCNPDVVT 246
Query: 247 YSTVATFYIRAG 258
Y+T+ RAG
Sbjct: 247 YNTIIDGLCRAG 258
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
+ +++ + +AG D++L+ +M+ +G + ++YN ++ +Y + + E+ +L M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
G+ D+ +Y + YG + + ++K+ E++RE H + +TYST+ Y + G
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLPNLLTYSTLIDGYSKGG 528
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 19/225 (8%)
Query: 131 NLSDIDKTEKVHGALL---------------NCYVRAGLVDKSLSQMQKMKEMGY-VSCL 174
NL DK + GALL R G + + S + MK G + +
Sbjct: 420 NLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479
Query: 175 NYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEI 234
YNN+M Y ++ Q KV ++ M+ G+SPD+ +Y + I+S R ++ +++ E+
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 235 EREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLE- 293
R G + ++ V + + G D K V + L+ Y +
Sbjct: 540 IRRGFV-PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 294 MKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLG 338
M+KA++ KL A K + Y TL+ +GD+++A +L+G
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVV-LYNTLIHGYCSVGDIEKACELIG 642
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 19/225 (8%)
Query: 131 NLSDIDKTEKVHGALL---------------NCYVRAGLVDKSLSQMQKMKEMGY-VSCL 174
NL DK + GALL R G + + S + MK G + +
Sbjct: 420 NLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479
Query: 175 NYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEI 234
YNN+M Y ++ Q KV ++ M+ G+SPD+ +Y + I+S R ++ +++ E+
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 235 EREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLE- 293
R G + ++ V + + G D K V + L+ Y +
Sbjct: 540 IRRGFV-PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 294 MKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLG 338
M+KA++ KL A K + Y TL+ +GD+++A +L+G
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVV-LYNTLIHGYCSVGDIEKACELIG 642
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 144 ALLNCYVRAGLVDKSLSQMQKMKEMGYVSCLN-YNNIMCLYAQSDQHEKVPGVLAMMKED 202
LLN V+ L D +KM ++G V+ ++ YN ++ ++S EK +L+ M+E
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 203 GVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXX 262
GV PDIF+Y I+ Y +S + + +ER G + +TY++ + R G
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG-VAPNIVTYNSFIHGFSREGRMRE 291
Query: 263 XXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLS 322
D++ + V Y LI Y + +RL ++ ++ Y ++L
Sbjct: 292 ATRLFREIKDDVTA-NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350
Query: 323 WLVKLGDLDEAEKLLGE 339
L + G + EA +LL E
Sbjct: 351 KLCEDGRIREANRLLTE 367
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 131/308 (42%), Gaps = 29/308 (9%)
Query: 39 DLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSS 98
DL+ R+ +G PS ++V N I L + K R+ ++ L V + M S
Sbjct: 231 DLFERMKEMG-PSPTLVTY--------NVI----LDVFGKMGRSWRKI---LGVLDEMRS 274
Query: 99 KGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDI--DKTEKVHGALLNCYVRAGLVD 156
KGL + L R L A+ +F L + + ALL + +AG+
Sbjct: 275 KGL-KFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYT 333
Query: 157 KSLSQMQKMKEMGYVSC----LNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYR 212
++LS +++M+E SC + YN ++ Y ++ ++ GV+ MM + GV P+ +Y
Sbjct: 334 EALSVLKEMEEN---SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 213 VCINSYGARSDLENMEKLLEEIEREGHTCV-DWMTYSTVATFYIRAGXXXXXXXXXXXXX 271
I++YG + KL ++ G CV + TY+ V + +
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAG--CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 272 DNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLD 331
N + +N +++ M K + R+++ K+ + TL+S + G
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 332 EAEKLLGE 339
+A K+ GE
Sbjct: 509 DASKMYGE 516
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 7/202 (3%)
Query: 140 KVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCL-NYNNIMCLYAQSDQH-EKVPGVLA 197
+ + +L+ Y R G +K++ ++MKEMG L YN I+ ++ + + K+ GVL
Sbjct: 211 RAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 198 MMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRA 257
M+ G+ D F+ +++ L ++ E++ G+ +TY+ + + +A
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE-PGTVTYNALLQVFGKA 329
Query: 258 GXXXXXXXXXXXXXDNLDKRSAVAYNHLISHY--AGLEMKKAMMRLWKLQKANCKRQLNG 315
G +N +V YN L++ Y AG + A + +K +
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT- 388
Query: 316 EYITLLSWLVKLGDLDEAEKLL 337
Y T++ K G DEA KL
Sbjct: 389 -YTTVIDAYGKAGKEDEALKLF 409
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 176 YNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIE 235
+N+++ ++ +++ +++ G+L ++EDG+SPD+ +Y ++ Y R + E++L+ +E
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 236 REGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEM 294
+ D ++Y+TV + R G + + YN +S Y + M
Sbjct: 694 K-SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 6/204 (2%)
Query: 141 VHGALLNCYVRAGLVDKSLSQMQKMKEMG--YVSCLNYNNIM-CLYAQSDQHEKVPGVLA 197
+ L+ + + G ++ + +++MK G Y + + Y+ +M CL+A S E V
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 198 MMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRA 257
M+ ++G+SPD ++ V IN + ++E +K+L+ +++ G + YS + + +
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCN-PNVYNYSALMNGFCKV 316
Query: 258 GXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYA-GLEMKKAMMRLWKLQKANCKRQLNGE 316
G K V Y L++ + E +AM L +++ + C R
Sbjct: 317 GKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC-RADTLT 375
Query: 317 YITLLSWLVKLGDLDEAEKLLGEW 340
Y +L L G +EA ++L +W
Sbjct: 376 YNVILRGLSSEGRSEEALQMLDQW 399
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 59 EKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLI-- 116
++W N + K + ++ K +TR A+ + M + G P D +V LI
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTR----MAMWLFSEMKNSGCRP----DASVYNALITA 177
Query: 117 -----GRVHGLESAESYFQNLSDIDKTEK---VHGALLNCYVRAGLVDKSLSQMQKMKEM 168
+ LE Y + I++ + + LL + ++G VD+ ++ + K +M
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ-VNALFKDLDM 236
Query: 169 GYVS--CLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLEN 226
VS +N +M Y ++ +++ VL M+ + PDI ++ V I+SYG + + E
Sbjct: 237 SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEK 296
Query: 227 MEKLLEEIER 236
ME+ + + R
Sbjct: 297 MEQTFKSLMR 306
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 59 EKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLI-- 116
++W N + K + ++ K +TR A+ + M + G P D +V LI
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTR----MAMWLFSEMKNSGCRP----DASVYNALITA 177
Query: 117 -----GRVHGLESAESYFQNLSDIDKTEK---VHGALLNCYVRAGLVDKSLSQMQKMKEM 168
+ LE Y + I++ + + LL + ++G VD+ ++ + K +M
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ-VNALFKDLDM 236
Query: 169 GYVS--CLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLEN 226
VS +N +M Y ++ +++ VL M+ + PDI ++ V I+SYG + + E
Sbjct: 237 SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEK 296
Query: 227 MEKLLEEIER 236
ME+ + + R
Sbjct: 297 MEQTFKSLMR 306
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 2/185 (1%)
Query: 156 DKSLSQMQKMKEMGYVSCLN-YNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVC 214
D L+ Q+M+E+GY ++ + ++ +A+ + + +L MK + DI Y VC
Sbjct: 185 DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 215 INSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNL 274
I+S+G ++ K EIE G D +TY+++ +A N
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLK-PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 275 DKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAE 334
AYN +I Y L + Q+A Y +L+ L K+G +DEA
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 335 KLLGE 339
K+ E
Sbjct: 364 KVFEE 368
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 38/221 (17%)
Query: 74 QLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGD-------------------RAVQLG 114
Q+I+KT +F A +V E + + P+ P R V
Sbjct: 213 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 272
Query: 115 LIGR--------VHGLESAESYFQNLS---------DIDKTEKVHGALLNCYVRAGLVDK 157
++G+ + L S E+ ++ +S DI + L+ Y RA ++
Sbjct: 273 MVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEE 332
Query: 158 SLSQMQKMKEMGYVSCLN-YNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCIN 216
+LS ++M + G YN ++ +A S E+ V M+ D + PD++SY ++
Sbjct: 333 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 392
Query: 217 SYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRA 257
+Y SD+E EK + I+ +G + +TY T+ Y +A
Sbjct: 393 AYVNASDMEGAEKFFKRIKVDGFEP-NIVTYGTLIKGYAKA 432
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 117 GRVHGLESAESYFQNLSD--IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMK-EMGYVSC 173
GR E A S F+ + D + T K + LL+ + +G+V+++ + + M+ + +
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 384
Query: 174 LNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEE 233
+Y ++ Y + E +K DG P+I +Y I Y +D+E M ++ E+
Sbjct: 385 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 444
Query: 234 IEREG 238
+ G
Sbjct: 445 MRLSG 449
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 140 KVHGALLN--CYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVL 196
K++ AL++ C VR ++ ++K+KE G+ + L YN ++ L+ + EKV +L
Sbjct: 512 KIYYALISGLCQVRRD--HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 197 AMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIR 256
M+++G PD +Y I+ +G D E++E+++E++ +G TY V Y
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT-VTTYGAVIDAYCS 628
Query: 257 AG 258
G
Sbjct: 629 VG 630
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 140 KVHGALLN--CYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVL 196
K++ AL++ C VR ++ ++K+KE G+ + L YN ++ L+ + EKV +L
Sbjct: 512 KIYYALISGLCQVRRD--HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEML 569
Query: 197 AMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIR 256
M+++G PD +Y I+ +G D E++E+++E++ +G TY V Y
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT-VTTYGAVIDAYCS 628
Query: 257 AG 258
G
Sbjct: 629 VG 630
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 140 KVHGALLN--CYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVL 196
K++ AL++ C VR ++ ++K+KE G+ + L YN ++ L+ + EKV +L
Sbjct: 512 KIYYALISGLCQVRRD--HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 197 AMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIR 256
M+++G PD +Y I+ +G D E++E+++E++ +G TY V Y
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPT-VTTYGAVIDAYCS 628
Query: 257 AG 258
G
Sbjct: 629 VG 630
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 38/221 (17%)
Query: 74 QLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGD-------------------RAVQLG 114
Q+I+KT +F A +V E + + P+ P R V
Sbjct: 220 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 279
Query: 115 LIGR--------VHGLESAESYFQNLS---------DIDKTEKVHGALLNCYVRAGLVDK 157
++G+ + L S E+ ++ +S DI + L+ Y RA ++
Sbjct: 280 MVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEE 339
Query: 158 SLSQMQKMKEMGYVSCLN-YNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCIN 216
+LS ++M + G YN ++ +A S E+ V M+ D + PD++SY ++
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 217 SYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRA 257
+Y SD+E EK + I+ +G + +TY T+ Y +A
Sbjct: 400 AYVNASDMEGAEKFFKRIKVDGFEP-NIVTYGTLIKGYAKA 439
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 117 GRVHGLESAESYFQNLSD--IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMK-EMGYVSC 173
GR E A S F+ + D + T K + LL+ + +G+V+++ + + M+ + +
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 391
Query: 174 LNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEE 233
+Y ++ Y + E +K DG P+I +Y I Y +D+E M ++ E+
Sbjct: 392 WSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 451
Query: 234 IEREG 238
+ G
Sbjct: 452 MRLSG 456
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 30/312 (9%)
Query: 15 QNLTANFQLLRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGN-------- 66
+N T++FQ LR +R Y R S D +V + +L Q N
Sbjct: 65 KNTTSSFQALRKHRR-----------YQR-SAFLDHNVDMDELLASIHQTQNEKELFSLL 112
Query: 67 -AIKEKQL--QLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLE 123
K++QL + +V L + +L + +W+ + S V L + R +
Sbjct: 113 STYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFD 172
Query: 124 SAESYFQNLSD--IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVS--CLNYNNI 179
A F + + + L+ + + G+ D +LS +QKM E VS + Y+N+
Sbjct: 173 IAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKM-EQDRVSGDLVLYSNL 231
Query: 180 MCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGH 239
+ L + + K + + +K G++PD+ +Y IN YG L++E+ G
Sbjct: 232 IELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG- 290
Query: 240 TCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMM 299
+ ++YST+ + Y+ + N +I Y L+M K
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEAD 350
Query: 300 RL-WKLQKANCK 310
RL W L+K + +
Sbjct: 351 RLFWSLRKMDIE 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 85 RFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKV--H 142
+F AL V M C + + + + G++ ++ A+ F +L +D V +
Sbjct: 310 KFLEALSVFAEMKEVN-CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 143 GALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKE 201
+L Y A L +++ + M+ + + YN ++ +Y ++ +HEK ++ M+
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQS 428
Query: 202 DGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
G+ P+ +Y I+ +G L+ L +++ G +D + Y T+ Y R G
Sbjct: 429 RGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG-VEIDQVLYQTMIVAYERVG 484
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 5/284 (1%)
Query: 44 ISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCP 103
I LG+ V V +L + ++ + L ++ L +++ + AL E M + G P
Sbjct: 451 IDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTP 510
Query: 104 ISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALL--NCYVRAGLVDKSLSQ 161
+ P + + + + +E S + ++D V L+ N + D + +
Sbjct: 511 L-PFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAI 569
Query: 162 MQKMKEMGYVSCLN-YNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGA 220
+ M+E+G + Y++I+ + + + A M E G+ PD +Y + IN+Y
Sbjct: 570 IDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629
Query: 221 RSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAV 280
++ +L+EE+ + + TY+ + + +++ G ++ + V
Sbjct: 630 NGRIDEANELVEEVVKHFLRPSSF-TYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVV 688
Query: 281 AYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWL 324
Y LI H+ K L+ L N + + YITLLS L
Sbjct: 689 LYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 8/240 (3%)
Query: 118 RVHGLESAESYFQ--NLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCL 174
R + AE F+ L+ I+ + +++ R G + ++ M + G + +
Sbjct: 267 RAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAI 326
Query: 175 NYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEI 234
+NN+M ++ ++ + EKV V MK+ G PD +Y I ++ +LEN K+L +
Sbjct: 327 TFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM 386
Query: 235 EREGHTC-VDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLE 293
++ C V+ T++T+ + + + + + V YN L+ + G +
Sbjct: 387 IKKK--CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSK 444
Query: 294 MKKAMMRLWK-LQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSPSLFL 352
++++ K + + +N Y L++ +G + A KL E L+PSL L
Sbjct: 445 STDMVLKMKKEMDDKEVEPNVNT-YRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSL 503
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 89 ALQVSEWMSSKGLCPISPGDRA---VQLGLIGRVHGLESAESYFQNLS--DIDKTEKVHG 143
A ++ M G P DRA + + GR AE+ F+ + I T K H
Sbjct: 353 AAEIFSLMQHMGCEP----DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 408
Query: 144 ALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKED 202
LL+ Y +A V K + +++M E G N+++ LY + Q K+ +LA M+
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 468
Query: 203 GVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIR 256
+ DI +Y + IN YG LE +E+L E+ +E + D +T+++ Y R
Sbjct: 469 PCTADISTYNILINIYGKAGFLERIEELFVEL-KEKNFRPDVVTWTSRIGAYSR 521
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 89 ALQVSEWMSSKGLCPISPGDRA---VQLGLIGRVHGLESAESYFQNLS--DIDKTEKVHG 143
A ++ M G P DRA + + GR AE+ F+ + I T K H
Sbjct: 375 AAEIFSLMQHMGCEP----DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 430
Query: 144 ALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKED 202
LL+ Y +A V K + +++M E G N+++ LY + Q K+ +LA M+
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 490
Query: 203 GVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIR 256
+ DI +Y + IN YG LE +E+L E+ +E + D +T+++ Y R
Sbjct: 491 PCTADISTYNILINIYGKAGFLERIEELFVEL-KEKNFRPDVVTWTSRIGAYSR 543
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 88/186 (47%), Gaps = 4/186 (2%)
Query: 76 IVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQN--LS 133
+VK LR AL + +++ L +P V + + ++S + Q L
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 134 DIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCLN-YNNIMCLYAQSDQHEKV 192
+E + ++++ Y + GL ++++ ++KE G + YN+++ ++ + +
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 193 PGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVAT 252
V MK DG P++F+Y V + + + ++ +KLL E+ +G C D ++Y+TV +
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG-CCPDAVSYTTVIS 224
Query: 253 FYIRAG 258
G
Sbjct: 225 SMCEVG 230
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 47 LGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISP 106
L DP + + VL +V++GN E L+++ + + T + LC I
Sbjct: 315 LKDPEMCLKVVL-MYVREGNM--ETTLEVVAAMRKAELKVTDCI----------LCAIVN 361
Query: 107 GDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMK 166
G + Q G V E A + + + + +N Y R +K+ +M
Sbjct: 362 G-FSKQRGFAEAVKVYEWAMK-----EECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMV 415
Query: 167 EMGYVSCL-NYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLE 225
+ G+ C+ Y+NIM +Y ++ + ++A MK+ G P+I+ Y I+ +G DL
Sbjct: 416 KKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLR 475
Query: 226 NMEKLLEEIEREGHTCVDWMTYSTVATFYIRA 257
EK+ +E++R D ++Y+++ + Y R+
Sbjct: 476 RAEKIWKEMKR-AKVLPDKVSYTSMISAYNRS 506
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 141 VHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSC-LNYNNIMCLYAQSDQHEKVPGVLAMM 199
+HG + +A V+++L +Q+MK G+ C ++Y I+ Y Q + KV +L+ M
Sbjct: 231 IHG-----WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 200 KEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTC-VDWMTYSTVATFYIRAG 258
+ +G P+ +Y ++S A+ + E ++ ++R G C D + Y+ + RAG
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG--CKPDSLFYNCLIHTLARAG 343
Query: 259 XXXXXXXXXXXXXDNLDKR-SAVAYNHLISHYAGL-EMKKAMMRLWKLQKANCKRQLNGE 316
L + YN +I+ Y E KA+ L +++ +N
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 317 YITLLSWLVKLGDLDEAEKLLGE 339
Y LL K GD+ E KLL E
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKE 426
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 141 VHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSC-LNYNNIMCLYAQSDQHEKVPGVLAMM 199
+HG + +A V+++L +Q+MK G+ C ++Y I+ Y Q + KV +L+ M
Sbjct: 231 IHG-----WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 200 KEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTC-VDWMTYSTVATFYIRAG 258
+ +G P+ +Y ++S A+ + E ++ ++R G C D + Y+ + RAG
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG--CKPDSLFYNCLIHTLARAG 343
Query: 259 XXXXXXXXXXXXXDNLDKR-SAVAYNHLISHYAGL-EMKKAMMRLWKLQKANCKRQLNGE 316
L + YN +I+ Y E KA+ L +++ +N
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 317 YITLLSWLVKLGDLDEAEKLLGE 339
Y LL K GD+ E KLL E
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKE 426
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 21/276 (7%)
Query: 76 IVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLI---GRVHGLESAESYFQNL 132
I++ L + H ++ E + S+ D V L +I G+ + A F+ +
Sbjct: 49 ILRRLSETRMVNHVSRIVELIRSQE----CKCDEDVALSVIKTYGKNSMPDQALDVFKRM 104
Query: 133 SDIDKTE---KVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCL-NYNNIMCLYAQSDQ 188
+I E + + LLN +V A K S + G L YN ++ + + +
Sbjct: 105 REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE 164
Query: 189 HEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYS 248
EK G L M ++G PD+FSY IN L++ +L +E+ G D Y+
Sbjct: 165 FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG-VAPDVTCYN 223
Query: 249 TVATFYIRAGXXXXXXXXXXXXXDNLDKRSAV-----AYNHLISHYAGLEMKKAMMRLWK 303
+ +++ D L + S+V +N +IS + +++W+
Sbjct: 224 ILIDGFLK----EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWE 279
Query: 304 LQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGE 339
K N + + Y +L+ L G++D+AE + E
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 144 ALLNCYVRAGLVDKSLSQMQKMKEMGYVS-CLNYNNIMCLYAQSDQHEKVPGVLAMMKED 202
++L AG +++ + K+ E G V+ + YN + + Q + + MK+D
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 203 GVSPDIFSYRVCINSYGARSDLENMEKLLEEIER 236
G SPDIF+Y + I S+G +++ + EE+ER
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 5/285 (1%)
Query: 57 VLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLI 116
VL++ +QG A ++ L KR A M GL P + A G I
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 117 GRVHGLESAESYFQNLSD--IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVS-C 173
SA+ Y + + + + + + L+N Y + G V ++ S + M + G +
Sbjct: 534 -EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 174 LNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEE 233
Y +M ++D+ + + M+ G++PD+FSY V IN + +++ + +E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 234 IEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLE 293
+ EG T + + Y+ + + R+G +AV Y +I Y
Sbjct: 653 MVEEGLT-PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 294 MKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLG 338
RL+ K + Y TL+ +L D++ A + G
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 61 WVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVH 120
WV N + E LI K K++ AL+V + + + G L L+G+
Sbjct: 87 WV---NTVTETLSDLIAK-----KQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSG 138
Query: 121 GLESAESYFQNLSD--IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSC----L 174
A+ F + + ++ T +++ ALL Y R+ L+D + S + KMK + C
Sbjct: 139 QPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMK--SFPQCQPDVF 196
Query: 175 NYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEI 234
Y+ ++ + Q + V + M E ++P+ + + ++ YG + MEK+L ++
Sbjct: 197 TYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM 256
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 144 ALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKED 202
A++N + +G ++ ++ + KMKE+G + YN ++ Y + + E+ +L +M E+
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 203 G---VSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
G V P+I ++ V + ++ + +E ++++++E G D +TY+T+AT Y++ G
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR-PDTVTYNTIATCYVQKG 237
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 144 ALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKED 202
A++N + +G ++ ++ + KMKE+G + YN ++ Y + + E+ +L +M E+
Sbjct: 120 AVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 203 G---VSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
G V P+I ++ V + ++ + +E ++++++E G D +TY+T+AT Y++ G
Sbjct: 180 GNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR-PDTVTYNTIATCYVQKG 237
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 4/200 (2%)
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCL-NYNNIMCLYAQSDQHEKVPGVLAMMK 200
+ L++ Y GL++++ M M G+ + YN ++ + ++E+ V A M
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXX 260
G+SPD +YR + + D+ EK+ ++ R D + +S++ + + R+G
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNL 391
Query: 261 XXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLW-KLQKANCKRQLNGEYIT 319
+ V Y LI Y M M L ++ + C + Y T
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV-VTYNT 450
Query: 320 LLSWLVKLGDLDEAEKLLGE 339
+L L K L EA+KL E
Sbjct: 451 ILHGLCKRKMLGEADKLFNE 470
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 7/282 (2%)
Query: 76 IVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAES---YFQNL 132
+ K L K+ A + E M S+GL P ++ + + G+ L+ A S Y +++
Sbjct: 150 LFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSL-ISVYGKSELLDKAFSTLEYMKSV 208
Query: 133 SDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEK 191
SD L++C + G D S + +M +G S + YN I+ Y ++ E+
Sbjct: 209 SDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEE 268
Query: 192 VPGVLAMMKEDGVS-PDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTV 250
+ VLA M EDG S PD+ + I SYG ++ ME + G D T++ +
Sbjct: 269 MESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQ-PDITTFNIL 327
Query: 251 ATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCK 310
+ +AG + V YN +I + + M +++ K
Sbjct: 328 ILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGV 387
Query: 311 RQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSPSLFL 352
+ + Y +L++ K G + + + +L + SD + + F
Sbjct: 388 KPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFF 429
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 6/219 (2%)
Query: 133 SDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY--VSCLNYNNIMCLYAQSDQHE 190
S+I+ V+ ++N + G K+ + M E VSC++YN+I+ + + + +
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601
Query: 191 KVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYST- 249
M +G+SP++ +Y +N + ++ ++ +E++ +G +D Y
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG-VKLDIPAYGAL 660
Query: 250 VATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANC 309
+ F R+ + L+ + YN LIS + L A + L+K +
Sbjct: 661 IDGFCKRSNMESASALFSELLEEGLNPSQPI-YNSLISGFRNLGNMVAALDLYKKMLKDG 719
Query: 310 KRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSP 348
R G Y TL+ L+K G+L A +L E + + GL P
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEMQ-AVGLVP 757
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 141/340 (41%), Gaps = 22/340 (6%)
Query: 23 LLRLYRSASTT-----VTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIV 77
LLRLY+ V D+ + GDPS + +L G + K L I+
Sbjct: 253 LLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS-KALQLLGMAQATGLSAKTATLVSII 311
Query: 78 KTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSD--I 135
L R A + E + G+ P + A+ G + + L+ AES + +
Sbjct: 312 SALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYV-KTGPLKDAESMVSEMEKRGV 370
Query: 136 DKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYV--SCLNYNNIMCLYAQSDQHEKVP 193
E + L++ YV AG + + +++M E G V + ++ ++ + + +K
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEM-EAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 194 GVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATF 253
VL MK GV PD Y V I+++G + L++ + + EG D +T++T+
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG-IEPDRVTWNTLIDC 488
Query: 254 YIRAGXXXXXXXXXXXXXDNLDKRS----AVAYNHLISHYAGLEMKKAMMRLWKLQKANC 309
+ + G + +++R A YN +I+ Y E M RL K+
Sbjct: 489 HCKHG----RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 310 KRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSPS 349
+ TL+ K G ++A + L E + S GL PS
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK-SVGLKPS 583
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 11/258 (4%)
Query: 76 IVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRA---VQLGLIGRVHGLESAESYFQNL 132
++ R R + QV + M S G+ P DR V + G+ + L+ A + F +
Sbjct: 415 LLAGFRDRGEWQKTFQVLKEMKSIGVKP----DRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 133 --SDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCLNYNNIMC-LYAQSDQH 189
I+ L++C+ + G + + M+ G + C NIM Y ++
Sbjct: 471 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERW 530
Query: 190 EKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYST 249
+ + +L MK G+ P++ ++ ++ YG + + LEE++ G M Y+
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM-YNA 589
Query: 250 VATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANC 309
+ Y + G + K S +A N LI+ + + + K N
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 310 KRQLNGEYITLLSWLVKL 327
+ Y TL+ L+++
Sbjct: 650 VKPDVVTYTTLMKALIRV 667
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 9/218 (4%)
Query: 138 TEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVL 196
E ++ +++ Y R G + + +++ M++ G L YN ++ + + + E +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 197 AMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIR 256
MK GVSP + +Y + I YG + + + +L+E+E G T + ++Y T+ +
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG-TMPNVVSYGTLINCLCK 506
Query: 257 AGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKR--QLN 314
D YN LI G K + ++ K K+ +LN
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLID---GCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 315 -GEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSPSLF 351
Y TL+ L G L EAE LL E GL P +F
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEIS-RKGLKPDVF 600
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 122/287 (42%), Gaps = 14/287 (4%)
Query: 71 KQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQ 130
K +++ K + +A V E M +G+ P D + +I G+ + + Q
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP----DVILYNNIISAFCGMGNMDRAIQ 575
Query: 131 NLSDIDK-----TEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCLN-YNNIMCLYA 184
+ ++ K T + +++ Y ++G + +SL M+ G V ++ +N ++
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 185 QSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDW 244
+ Q EK +L M GVS + +Y + Y + D + ++ EG VD
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLD-VDI 694
Query: 245 MTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGL-EMKKAMMRLWK 303
TY + ++G R++ YN LI +A ++ +A + +
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 304 LQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSPSL 350
++K K ++ Y + +S K GD++ A + + E E + G+ P++
Sbjct: 755 MKKEGVKPDIH-TYTSFISACSKAGDMNRATQTIEEME-ALGVKPNI 799
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 55 VPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCP-ISPGDRAVQL 113
V VL++ + + + ++ TL + A +++ ++SKG+ P + + +Q
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 114 GLIGRVHGLESAESYFQNLSD--IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYV 171
+ R H + A F+ + + E + L++ G +D++L+ +++M+ G
Sbjct: 410 LCLTRNHRV--AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 172 -SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKL 230
S + YN ++ + ++++ + + M+ GVS + +Y I+ +E+ +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 231 LEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHY- 289
++++ EG D TY+++ T + R G N + V Y LIS
Sbjct: 528 MDQMIMEGQK-PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 290 -AG-LEMKKAMMRLWKLQKAN 308
AG +E+ ++R +++ N
Sbjct: 587 KAGRVEVASKLLRSIQMKGIN 607
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 123 ESAESYFQNLSD-IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCLNYNNIMC 181
E++E++ + L + I T +++ Y G + + S M+ MK YN ++
Sbjct: 316 EASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILIS 375
Query: 182 LYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTC 241
L+ +++ E+ MK+DG+ PD SYR + ++ R +E E L+ E++ + +
Sbjct: 376 LHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMD-DDNVE 434
Query: 242 VDWMTYSTVATFYIRA 257
+D T S + Y+ A
Sbjct: 435 IDEYTQSALTRMYVEA 450
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 29/260 (11%)
Query: 114 GLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSC 173
+IG V G+ + + + +L+ Y + GL++++ + +KE V+
Sbjct: 272 AMIGDVEGMTRVLRLMSE-RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVAD 330
Query: 174 LN-YNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLE 232
+ Y +M Y ++ Q V M E GV + IN Y L E++
Sbjct: 331 QHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFS 390
Query: 233 EIEREGHTCVDW------MTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLI 286
+ DW TY+T+ Y RAG + + YN L+
Sbjct: 391 RMN-------DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 287 SHYAGLEMKKAMMRLWKLQKANCKRQLNGEYI---TLLSWLVKLGDLDEAEKLLGEWE-- 341
Y+ + ++ LWK+ KR +N + I TLL L KLGD +EA KL WE
Sbjct: 444 KGYSRIGAFHDVLSLWKMM---LKRGVNADEISCSTLLEALFKLGDFNEAMKL---WENV 497
Query: 342 LSDGL---SPSLFLEISCTC 358
L+ GL + +L + IS C
Sbjct: 498 LARGLLTDTITLNVMISGLC 517
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 114/273 (41%), Gaps = 16/273 (5%)
Query: 73 LQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNL 132
+I+K + +AL V + M + G P ++ L+ + + Y Q +
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 133 S-DIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKE-MGY-VSCLNYNNIMCLYAQSDQH 189
S ++ ++N Y R+G VDK++ ++ + +G ++ + YN+++ YA
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 190 EKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYST 249
E + VL +M E GVS ++ +Y I Y + +E E + E+ +E D Y
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF-ELLKEKKLVADQHMYGV 336
Query: 250 VATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAG----LEMKKAMMRL--WK 303
+ Y R G + + + N LI+ Y +E ++ R+ W
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 304 LQKANCKRQLNGEYITLLSWLVKLGDLDEAEKL 336
L+ + Y TL+ + G +DEA KL
Sbjct: 397 LKPD------HHTYNTLVDGYCRAGYVDEALKL 423
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 110 AVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHG--ALLNCYVRAGLVDKSLSQMQKMKE 167
AV + G+ L A F + + V+ AL++ V+AG+++++ S ++KM+E
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
Query: 168 MGYVSCLNYNNIMCL-YAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLEN 226
G + +N +NI+ +A++ + + +K G+ PD +Y + + E
Sbjct: 543 NGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 227 MEKLLEEIEREGHTCVDWMTYSTV 250
+++ E++ +G D +TYS++
Sbjct: 603 AARMMREMKDKGFE-YDAITYSSI 625
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 140 KVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCLNYNNIMCLYAQSDQHEKVPGVLAMM 199
+V ++L Y + G +D + ++M+E ++ +N+++ Y Q+ +HE+ ++ M
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRMRERDVIA---WNSVLLAYCQNGKHEEAVELVKEM 273
Query: 200 KEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
+++G+SP + ++ + I Y + L++++E G T D T++ + + I G
Sbjct: 274 EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGIT-ADVFTWTAMISGLIHNG 331