Miyakogusa Predicted Gene

Lj0g3v0094889.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0094889.1 Non Chatacterized Hit- tr|I1J3A1|I1J3A1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,40.17,3e-19,TPR-like,NULL; Tetratricopeptide
repeats,Tetratricopeptide repeat; TPR_11,NULL;
TPR_1,Tetratricopept,CUFF.5269.1
         (148 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17670.2 | Symbols:  | tetratricopeptide repeat (TPR)-contain...   137   2e-33
AT3G17670.1 | Symbols:  | tetratricopeptide repeat (TPR)-contain...   137   2e-33
AT4G12400.2 | Symbols: Hop3 | stress-inducible protein, putative...    58   2e-09
AT4G12400.1 | Symbols: Hop3 | stress-inducible protein, putative...    58   2e-09
AT1G12270.1 | Symbols: Hop1 | stress-inducible protein, putative...    56   7e-09
AT1G62740.1 | Symbols: Hop2 | stress-inducible protein, putative...    55   2e-08

>AT3G17670.2 | Symbols:  | tetratricopeptide repeat (TPR)-containing
           protein | chr3:6040857-6042475 FORWARD LENGTH=244
          Length = 244

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/125 (53%), Positives = 93/125 (74%)

Query: 18  NSLDALALRKRADIEFEKRNFVEAELLLSQAIDLKSFGGMHVTFKCRSLVRLELGNYSGA 77
           ++L ALAL   A  + +  NF EAE LL+QA++LK +GG+H  FK RS+ +L + +YSGA
Sbjct: 106 DALTALALTNNALSQIDAGNFSEAEALLTQALELKPYGGLHRIFKHRSVAKLGMLDYSGA 165

Query: 78  LNDATEALALAPRYSEAYICVGNAFLALDKFDLAEQSYLAALDIDPSIRHSKSFKVRIAM 137
           L D ++ALALAP YSE YIC G+ ++A  ++DLAE+SYL  L+IDPS+R SK FK RIA 
Sbjct: 166 LEDISQALALAPNYSEPYICQGDVYVAKGQYDLAEKSYLTCLEIDPSLRRSKPFKARIAK 225

Query: 138 LKEKL 142
           L++K+
Sbjct: 226 LQQKV 230


>AT3G17670.1 | Symbols:  | tetratricopeptide repeat (TPR)-containing
           protein | chr3:6040857-6042012 FORWARD LENGTH=236
          Length = 236

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/125 (53%), Positives = 93/125 (74%)

Query: 18  NSLDALALRKRADIEFEKRNFVEAELLLSQAIDLKSFGGMHVTFKCRSLVRLELGNYSGA 77
           ++L ALAL   A  + +  NF EAE LL+QA++LK +GG+H  FK RS+ +L + +YSGA
Sbjct: 106 DALTALALTNNALSQIDAGNFSEAEALLTQALELKPYGGLHRIFKHRSVAKLGMLDYSGA 165

Query: 78  LNDATEALALAPRYSEAYICVGNAFLALDKFDLAEQSYLAALDIDPSIRHSKSFKVRIAM 137
           L D ++ALALAP YSE YIC G+ ++A  ++DLAE+SYL  L+IDPS+R SK FK RIA 
Sbjct: 166 LEDISQALALAPNYSEPYICQGDVYVAKGQYDLAEKSYLTCLEIDPSLRRSKPFKARIAK 225

Query: 138 LKEKL 142
           L++K+
Sbjct: 226 LQQKV 230


>AT4G12400.2 | Symbols: Hop3 | stress-inducible protein, putative |
           chr4:7338866-7341239 REVERSE LENGTH=558
          Length = 558

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 12/116 (10%)

Query: 33  FEKRNFVEAELLLSQAIDLKSFGGMHVTFKCRSLVRLELGNYSGALNDATEALALAPRYS 92
           F   ++  A    ++AI+L      H+ +  RS     L  Y  AL+DA + + L P +S
Sbjct: 13  FSSGDYATAITHFTEAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTIELKPDWS 70

Query: 93  EAYICVGNAFLALDKFDLAEQSYLAALDIDPSIRHSKSFKVRIAMLKEKLAAANRT 148
           + Y  +G AF+ L KFD A  SY   L+IDPS            MLK  LA A+R+
Sbjct: 71  KGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSNE----------MLKSGLADASRS 116


>AT4G12400.1 | Symbols: Hop3 | stress-inducible protein, putative |
           chr4:7339024-7341239 REVERSE LENGTH=530
          Length = 530

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 12/116 (10%)

Query: 33  FEKRNFVEAELLLSQAIDLKSFGGMHVTFKCRSLVRLELGNYSGALNDATEALALAPRYS 92
           F   ++  A    ++AI+L      H+ +  RS     L  Y  AL+DA + + L P +S
Sbjct: 13  FSSGDYATAITHFTEAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTIELKPDWS 70

Query: 93  EAYICVGNAFLALDKFDLAEQSYLAALDIDPSIRHSKSFKVRIAMLKEKLAAANRT 148
           + Y  +G AF+ L KFD A  SY   L+IDPS            MLK  LA A+R+
Sbjct: 71  KGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSNE----------MLKSGLADASRS 116


>AT1G12270.1 | Symbols: Hop1 | stress-inducible protein, putative |
           chr1:4172105-4174575 FORWARD LENGTH=572
          Length = 572

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 33  FEKRNFVEAELLLSQAIDLKSFGGMHVTFKCRSLVRLELGNYSGALNDATEALALAPRYS 92
           F   +F  A    ++AI L      HV F  RS     L  Y+ AL+DA E + L P + 
Sbjct: 13  FSSGDFTTAINHFTEAIALAPTN--HVLFSNRSAAHASLHQYAEALSDAKETIKLKPYWP 70

Query: 93  EAYICVGNAFLALDKFDLAEQSYLAALDIDPS 124
           + Y  +G A L L++F+LA  +Y   LD+DP+
Sbjct: 71  KGYSRLGAAHLGLNQFELAVTAYKKGLDVDPT 102


>AT1G62740.1 | Symbols: Hop2 | stress-inducible protein, putative |
           chr1:23231026-23233380 FORWARD LENGTH=571
          Length = 571

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 33  FEKRNFVEAELLLSQAIDLKSFGGMHVTFKCRSLVRLELGNYSGALNDATEALALAPRYS 92
           F   +F  A    + AI+L      HV F  RS     L +Y  AL+DA + + L P + 
Sbjct: 13  FSSGDFNSAVNHFTDAINLTPTN--HVLFSNRSAAHASLNHYDEALSDAKKTVELKPDWG 70

Query: 93  EAYICVGNAFLALDKFDLAEQSYLAALDIDPS 124
           + Y  +G A L L++FD A ++Y   L+IDPS
Sbjct: 71  KGYSRLGAAHLGLNQFDEAVEAYSKGLEIDPS 102