Miyakogusa Predicted Gene

Lj0g3v0094799.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0094799.1 Non Chatacterized Hit- tr|J9AS06|J9AS06_BACCE
Uncharacterized protein OS=Bacillus cereus BAG6X1-1
PE,39.16,1e-18,UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,
6-DIAMINOPIMELATE LIGASE,NULL; MUR LIGASE FAMILY MEMBER,NU,CUFF.5388.1
         (404 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63680.1 | Symbols: ATMURE, PDE316, MURE | acid-amino acid li...   390   e-109

>AT1G63680.1 | Symbols: ATMURE, PDE316, MURE | acid-amino acid
           ligases;ligases;ATP binding;ATP binding;ligases |
           chr1:23614461-23617247 FORWARD LENGTH=772
          Length = 772

 Score =  390 bits (1002), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/425 (55%), Positives = 292/425 (68%), Gaps = 28/425 (6%)

Query: 1   MALPFLTLPSFFHTSNSITATFA-PPSTRFRSHSYRLRPPGATGADGIFYPNXXXXXXXX 59
           MA  FL+    F +    T++F+  P     S + R     A  A    YPN        
Sbjct: 1   MAFTFLSPHPVFLSLTGTTSSFSYKPVLLPFSRNSRTLTVAAGPARRNSYPNPADDDPPE 60

Query: 60  XXXXXXHGFSKFQQIHIQADRARQIQEEDFKKNQSTFLAAIADVEDAPDIPSTLDSGADD 119
                 HG SKFQQI  QA RAR+++EEDF+KN++T+L+AIADVEDA +     +    D
Sbjct: 61  APEDSMHGVSKFQQIQRQAARARKLEEEDFEKNRNTYLSAIADVEDAAETGRDDEESGGD 120

Query: 120 LFGEIDKAIALKRKEFVKQGLLQPNPAKPLIPDVADELQPDELADV-------------- 165
           LF +ID+AI++KR EFVKQGLL+PNP K        E   +E  DV              
Sbjct: 121 LFSDIDRAISMKRSEFVKQGLLKPNPPKTASLKKIGEEGNEEEGDVTDDVDELDEEEVVD 180

Query: 166 -EEIDQLRDLAAAATSDEPPGDFVGEGDDSSLK------ADSPFELDFESYGKSKARIVE 218
            +EID+L  L     SDE   D+V E  ++ +       +D  FE D + +G+SKARIVE
Sbjct: 181 LDEIDKLTGLTE--ISDEE--DWVDEEGNTRINKKKEFGSDHQFEFDLDDFGESKARIVE 236

Query: 219 PKFRMSLAELLDESKVVPVSVYGNLEVEITGIQHDSRLVTSGNLFVCCVKNDGHVLLSEA 278
           PKF+M LAELLDESKVVP+SVYG+L+VEITGIQHDSR V++G+LFVCC+ ++    LSEA
Sbjct: 237 PKFKMCLAELLDESKVVPISVYGDLDVEITGIQHDSRGVSAGDLFVCCLGSEN--FLSEA 294

Query: 279 DKRGAVAVVASKEIDIEDTLGCKALVIVEDTNAVLAALAASFYRYPSKNMAVIGIAGTYG 338
           DKRGAVAVVASKEIDIEDTLGC+ALVIVEDTNAVLAALA+SFYR+PSKNM+VIG+ GT G
Sbjct: 295 DKRGAVAVVASKEIDIEDTLGCRALVIVEDTNAVLAALASSFYRHPSKNMSVIGVTGTDG 354

Query: 339 KTTTTYLIKSMYEAMGLRTGMFNSIACYVHGDNQLDLEAVDETLDAVLVQNLMAKMLHNG 398
           KTTTTYLIKS+YEAMG+RTGMF++++CY+HGDN+LD        DAVLVQ+LMAKMLHNG
Sbjct: 355 KTTTTYLIKSLYEAMGVRTGMFSTVSCYIHGDNKLDTPNATMNPDAVLVQSLMAKMLHNG 414

Query: 399 TEAVV 403
           TE++V
Sbjct: 415 TESLV 419