Miyakogusa Predicted Gene

Lj0g3v0094199.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0094199.1 Non Chatacterized Hit- tr|D7SRQ3|D7SRQ3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,91.95,1.99965e-42,SUBFAMILY NOT NAMED,NULL; BYSTIN,Bystin;
Bystin,Bystin,CUFF.5199.1
         (98 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G31660.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Bystin (In...   147   1e-36

>AT1G31660.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Bystin
           (InterPro:IPR007955); Has 475 Blast hits to 467 proteins
           in 210 species: Archae - 0; Bacteria - 9; Metazoa - 155;
           Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes
           - 117 (source: NCBI BLink). | chr1:11331176-11333440
           REVERSE LENGTH=444
          Length = 444

 Score =  147 bits (371), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 78/86 (90%)

Query: 1   MQHWEEVLYVTEPENWSPNAMYQATRIFASNLGAKKAERFYRLVLLARVREDIRKNKRLH 60
           M+HWE+VLY+TEPE WSPNA+YQATRIFASNL  ++ +RFY  VLL RVREDIRK+K+LH
Sbjct: 196 MEHWEDVLYLTEPEKWSPNALYQATRIFASNLKDRQVQRFYNYVLLPRVREDIRKHKKLH 255

Query: 61  FALYQSLKKALYKPAAFFKGILFPLC 86
           FALYQ+LKK+LYKP+AF +GILFPLC
Sbjct: 256 FALYQALKKSLYKPSAFNQGILFPLC 281