Miyakogusa Predicted Gene

Lj0g3v0093179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0093179.1 Non Chatacterized Hit- tr|I1LUY5|I1LUY5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10890
PE,88.46,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.5116.1
         (59 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54190.1 | Symbols: PORA | protochlorophyllide oxidoreductase...   100   4e-22
AT5G54190.2 | Symbols: PORA | protochlorophyllide oxidoreductase...    99   5e-22
AT4G27440.2 | Symbols: PORB | protochlorophyllide oxidoreductase...    97   2e-21
AT4G27440.1 | Symbols: PORB | protochlorophyllide oxidoreductase...    97   2e-21
AT1G03630.2 | Symbols: POR C, PORC | protochlorophyllide oxidore...    93   4e-20
AT1G03630.1 | Symbols: POR C, PORC | protochlorophyllide oxidore...    93   4e-20

>AT5G54190.1 | Symbols: PORA | protochlorophyllide oxidoreductase A
           | chr5:21991183-21992773 REVERSE LENGTH=405
          Length = 405

 Score = 99.8 bits (247), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 50/54 (92%)

Query: 6   VMQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           + QVV DPSLTKSGVYWSWNK SASFENQLSQEASD +KAR+VWE+SEKLVGLA
Sbjct: 352 LAQVVADPSLTKSGVYWSWNKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 405


>AT5G54190.2 | Symbols: PORA | protochlorophyllide oxidoreductase A
           | chr5:21991183-21992238 REVERSE LENGTH=284
          Length = 284

 Score = 99.4 bits (246), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 50/54 (92%)

Query: 6   VMQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           + QVV DPSLTKSGVYWSWNK SASFENQLSQEASD +KAR+VWE+SEKLVGLA
Sbjct: 231 LAQVVADPSLTKSGVYWSWNKTSASFENQLSQEASDVEKARRVWEVSEKLVGLA 284


>AT4G27440.2 | Symbols: PORB | protochlorophyllide oxidoreductase B
           | chr4:13725648-13727107 FORWARD LENGTH=401
          Length = 401

 Score = 97.1 bits (240), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 49/54 (90%)

Query: 6   VMQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           + QVV DPSLTKSGVYWSWN  SASFENQLS+EASD +KARKVWEISEKLVGLA
Sbjct: 348 LAQVVSDPSLTKSGVYWSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401


>AT4G27440.1 | Symbols: PORB | protochlorophyllide oxidoreductase B
           | chr4:13725648-13727107 FORWARD LENGTH=401
          Length = 401

 Score = 97.1 bits (240), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 49/54 (90%)

Query: 6   VMQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           + QVV DPSLTKSGVYWSWN  SASFENQLS+EASD +KARKVWEISEKLVGLA
Sbjct: 348 LAQVVSDPSLTKSGVYWSWNNASASFENQLSEEASDVEKARKVWEISEKLVGLA 401


>AT1G03630.2 | Symbols: POR C, PORC | protochlorophyllide
           oxidoreductase C | chr1:907699-909245 FORWARD LENGTH=399
          Length = 399

 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/54 (77%), Positives = 50/54 (92%)

Query: 6   VMQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           + QVV DPSL KSGVYWSWN +S+SFENQLS+EASDA+KA+K+WE+SEKLVGLA
Sbjct: 346 LAQVVSDPSLGKSGVYWSWNNNSSSFENQLSKEASDAEKAKKLWEVSEKLVGLA 399


>AT1G03630.1 | Symbols: POR C, PORC | protochlorophyllide
           oxidoreductase C | chr1:907699-909245 FORWARD LENGTH=401
          Length = 401

 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/54 (77%), Positives = 50/54 (92%)

Query: 6   VMQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           + QVV DPSL KSGVYWSWN +S+SFENQLS+EASDA+KA+K+WE+SEKLVGLA
Sbjct: 348 LAQVVSDPSLGKSGVYWSWNNNSSSFENQLSKEASDAEKAKKLWEVSEKLVGLA 401