Miyakogusa Predicted Gene
- Lj0g3v0092809.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0092809.1 Non Chatacterized Hit- tr|I1LM87|I1LM87_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,23.94,3e-18,PGR3 (PROTON GRADIENT REGULATION 3),NULL; FAMILY NOT
NAMED,NULL; PPR: pentatricopeptide repeat domai,CUFF.5090.1
(461 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 9e-90
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 326 2e-89
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 2e-87
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 2e-84
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 9e-84
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 3e-82
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 1e-81
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 4e-81
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 7e-80
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 291 5e-79
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 1e-78
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 288 7e-78
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 288 8e-78
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 286 2e-77
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 286 2e-77
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 1e-76
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 1e-76
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 282 3e-76
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 5e-76
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 1e-75
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 278 5e-75
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 276 2e-74
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 3e-73
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 270 1e-72
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 3e-72
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 6e-72
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 267 1e-71
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 264 8e-71
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 8e-70
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 9e-70
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 261 9e-70
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 261 1e-69
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 259 2e-69
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 6e-69
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 1e-68
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 257 1e-68
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 256 3e-68
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 1e-67
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 4e-67
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 5e-67
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 7e-67
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 249 3e-66
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 5e-66
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 247 1e-65
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 4e-65
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 244 8e-65
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 242 3e-64
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 5e-63
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 236 3e-62
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 235 4e-62
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 4e-62
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 5e-62
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 234 7e-62
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 8e-62
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 4e-61
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 6e-61
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 231 7e-61
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 9e-61
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 1e-60
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 230 2e-60
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 228 8e-60
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 1e-59
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 227 1e-59
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 227 2e-59
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 8e-59
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 7e-58
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 7e-58
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 3e-57
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 3e-57
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 5e-57
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 8e-57
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 1e-55
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 2e-55
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 213 2e-55
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 212 4e-55
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 6e-55
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 7e-55
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 8e-55
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 6e-54
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 204 8e-53
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 9e-53
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 201 6e-52
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 7e-52
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 9e-52
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 2e-50
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 2e-48
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 2e-48
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 3e-48
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 4e-47
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 6e-46
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 8e-46
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 178 8e-45
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 9e-43
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 3e-41
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 4e-38
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 4e-35
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 5e-35
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 5e-32
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 130 2e-30
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 7e-27
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 93 4e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 83 4e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 81 2e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 81 2e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 80 3e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 77 2e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 70 4e-12
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 69 8e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 68 2e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 66 6e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 6e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 65 7e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 62 6e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 60 5e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 58 1e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 57 2e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 55 9e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 52 6e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 52 1e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 51 1e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 327 bits (839), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 182/452 (40%), Positives = 265/452 (58%), Gaps = 16/452 (3%)
Query: 9 NSPPSES-IAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
+SP S I++Y M R V P+ HTF F L + LG + HA ++ G
Sbjct: 39 SSPQRHSPISVYLRMRNHR--VSPDFHTFPFLLPSFHNPLHLPLGQ--RTHAQILLFGLD 94
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
+D FVR +L+++Y CG + S +RVF+ D+ D+ WNSV+ + G I DA K+
Sbjct: 95 KDPFVRTSLLNMYSSCGD-LRSAQRVFD---DSGSKDLPAWNSVVNAYAKAGLIDDARKL 150
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR-----EKGIRPNEXXXXXXXXXXX 182
FDEMPER+V+SWS +I GYV G ++ L+ F M+ E +RPNE
Sbjct: 151 FDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACG 210
Query: 183 XXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESI-SGKDIWTWN 241
E G++VH+ I+ I + +GTAL+DMYAKCG +E+++ +F ++ S KD+ ++
Sbjct: 211 RLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYS 270
Query: 242 VMICGLASHGLAKDALALFHKFL-SEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
MIC LA +GL + LF + S+ P +VTFVG+L AC GL++EGK YF +M++
Sbjct: 271 AMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE 330
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
+GI P ++HYGCMVDL R+GL+ EA I +M +EPD ++W +LL ++ G + E
Sbjct: 331 EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCE 390
Query: 361 KIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGI 420
+LI+LDPM+ G YV L+ +YAK +W +V +R M K KV G S VE+EG +
Sbjct: 391 GALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVV 450
Query: 421 HHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
H FV GD+ S IY ML+ I Q + AGY
Sbjct: 451 HEFVVGDESQQESERIYAMLDEIMQRLREAGY 482
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 173/451 (38%), Positives = 256/451 (56%), Gaps = 13/451 (2%)
Query: 15 SIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRN 74
+I ++ M+ FV+PN+ TF L AC K + G Q+H +K GF D FV +
Sbjct: 111 AITLFYEMMSDE-FVEPNRFTFPSVLKACAK--TGKIQEGKQIHGLALKYGFGGDEFVMS 167
Query: 75 ALIHLYCECG----SSVESFKRVFEEEEDTLCS------DVVTWNSVLAGVVRNGEIRDA 124
L+ +Y CG + V +K + E++ + ++V WN ++ G +R G+ + A
Sbjct: 168 NLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAA 227
Query: 125 EKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXX 184
+FD+M +R VVSW+TMI GY NG +D +E F M++ IRPN
Sbjct: 228 RMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL 287
Query: 185 XXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMI 244
E G ++H E RI +G+AL+DMY+KCG IEK+ +FE + +++ TW+ MI
Sbjct: 288 GSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMI 347
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGI 304
G A HG A DA+ F K G P +V ++ +L ACS GGLV EG+RYF+ MV G+
Sbjct: 348 NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGL 407
Query: 305 QPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGN 364
+P +EHYGCMVDLL R+GL+DEA I M ++PD V+W LL AC++ G V+MG+++ N
Sbjct: 408 EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVAN 467
Query: 365 KLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFV 424
L+ + P G YV L+ +YA W +V +R M EK +K G SL++++G +H FV
Sbjct: 468 ILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFV 527
Query: 425 AGDKDHDCSSDIYRMLETIGQGITAAGYPSV 455
D H + +I ML I + AGY +
Sbjct: 528 VEDDSHPKAKEINSMLVEISDKLRLAGYRPI 558
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 52/280 (18%)
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQN----GLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
A K+F++MP+R+ SW+T+I G+ ++ L+ L + +M ++ + PN
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITL-FYEMMSDEFVEPNRFTFPSVLK 136
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCG------------CIEK--- 224
+ G+ +H F V + LV MY CG IEK
Sbjct: 137 ACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV 196
Query: 225 ------------------------------SRALFESISGKDIWTWNVMICGLASHGLAK 254
+R LF+ + + + +WN MI G + +G K
Sbjct: 197 VMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFK 256
Query: 255 DALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCM 314
DA+ +F + P VT V VL A S G + G+ + +L + GI+ + +
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGE-WLHLYAEDSGIRIDDVLGSAL 315
Query: 315 VDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
+D+ ++ G++++A+H+ E + E + + W+ +++ +HG
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHG 354
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 262/453 (57%), Gaps = 10/453 (2%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IRC + + PS++ Y+ ML+ R + P+ TF F + A ++ +G Q H+
Sbjct: 88 LIRCFS-TGAEPSKAFGFYTQMLKSR--IWPDNITFPFLIKASSEMECVLVGE--QTHSQ 142
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+V+ GF DV+V N+L+H+Y CG + + R+F + DVV+W S++AG + G
Sbjct: 143 IVRFGFQNDVYVENSLVHMYANCGF-IAAAGRIFGQ---MGFRDVVSWTSMVAGYCKCGM 198
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ +A ++FDEMP R++ +WS MI GY +N E ++ F M+ +G+ NE
Sbjct: 199 VENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISS 258
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
E G + + + + +GTALVDM+ +CG IEK+ +FE + D +W
Sbjct: 259 CAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSW 318
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
+ +I GLA HG A A+ F + +S GFIP +VTF VL+ACS GGLV +G + M
Sbjct: 319 SSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKK 378
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
+GI+P +EHYGC+VD+L RAG + EA + I M V+P+ + LL ACK++ ++ E
Sbjct: 379 DHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAE 438
Query: 361 KIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGI 420
++GN LI++ P H G+YV L+ IYA A +W+ + +R +M EK+ KK GWSL+E++G I
Sbjct: 439 RVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKI 498
Query: 421 HHFVAG-DKDHDCSSDIYRMLETIGQGITAAGY 452
+ F G D+ H I R E I I GY
Sbjct: 499 NKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGY 531
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 252/449 (56%), Gaps = 14/449 (3%)
Query: 6 AKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLG 65
A N ++ +Y +L + PN+ TF+ L +C+ + SG +H HV+K G
Sbjct: 105 ASINGLKDQAFLLYVQLLSSE--INPNEFTFSSLLKSCSTK------SGKLIHTHVLKFG 156
Query: 66 FARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAE 125
D +V L+ +Y + G V S ++VF+ + +V+ +++ + G + A
Sbjct: 157 LGIDPYVATGLVDVYAK-GGDVVSAQKVFDRMPE---RSLVSSTAMITCYAKQGNVEAAR 212
Query: 126 KVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFS-VMREKGIRPNEXXXXXXXXXXXXX 184
+FD M ERD+VSW+ MI GY Q+G D L F ++ E +P+E
Sbjct: 213 ALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQI 272
Query: 185 XXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMI 244
E GR++H ++S + R+ V V T L+DMY+KCG +E++ +F KDI WN MI
Sbjct: 273 GALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMI 332
Query: 245 CGLASHGLAKDALALFHKFLS-EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG 303
G A HG ++DAL LF++ G P ++TF+G L AC+ GLV+EG R F M YG
Sbjct: 333 AGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYG 392
Query: 304 IQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIG 363
I+P++EHYGC+V LL RAG + A I+ M ++ D VLW+++L +CK+HG +G++I
Sbjct: 393 IKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIA 452
Query: 364 NKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHF 423
LI L+ + G YV L+ IYA +E V +VR LM EK K G S +E+E +H F
Sbjct: 453 EYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEF 512
Query: 424 VAGDKDHDCSSDIYRMLETIGQGITAAGY 452
AGD++H S +IY ML I + I + GY
Sbjct: 513 RAGDREHSKSKEIYTMLRKISERIKSHGY 541
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 307 bits (787), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 243/444 (54%), Gaps = 14/444 (3%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P S+ +Y ML N +TF L AC+ S Q+HA + KLG+ DV+
Sbjct: 96 PERSLLLYQRMLCSS--APHNAYTFPSLLKACSN--LSAFEETTQIHAQITKLGYENDVY 151
Query: 72 VRNALIHLYCECGSSVES---FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
N+LI+ Y G+ + F R+ E D V+WNSV+ G V+ G++ A +F
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIPE-------PDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+M E++ +SW+TMI GYVQ + ++ L+ F M+ + P+ E
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G+++HS + + R+ +G L+DMYAKCG +E++ +F++I K + W +I G A
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
HG ++A++ F + G P +TF VL ACS GLV EGK F M Y ++P +
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
EHYGC+VDLL RAGL+DEA I+ M ++P+ V+W LL AC++H +++GE+IG LI
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 444
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
+DP H G YV A I+A +KW+ R+LM E+ KV G S + LEG H F+AGD+
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDR 504
Query: 429 DHDCSSDIYRMLETIGQGITAAGY 452
H I + + + GY
Sbjct: 505 SHPEIEKIQSKWRIMRRKLEENGY 528
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/455 (36%), Positives = 259/455 (56%), Gaps = 9/455 (1%)
Query: 1 MIRCHAKANSP-PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHA 59
MIR H K SP P +S Y +L +KP+ +T F + ACT +G+QVH
Sbjct: 77 MIRAHCK--SPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACT--GLRMRETGLQVHG 132
Query: 60 HVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNG 119
++ GF D V+ LI LY E G ++S +VF C D V +++ R G
Sbjct: 133 MTIRRGFDNDPHVQTGLISLYAELGC-LDSCHKVFNS---IPCPDFVCRTAMVTACARCG 188
Query: 120 EIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
++ A K+F+ MPERD ++W+ MI GY Q G + L F +M+ +G++ N
Sbjct: 189 DVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
+ GR+ HS IE K +ITV + T LVD+YAKCG +EK+ +F + K+++T
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 240 WNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV 299
W+ + GLA +G + L LF +G P VTFV VL CS+ G V EG+R+F+ M
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 300 DCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMG 359
+ +GI+P++EHYGC+VDL ARAG +++AV +I+ M ++P +W++LL A +++ +++G
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELG 428
Query: 360 EKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGG 419
K+++L+ + G YV L+ IYA + W++V VR+ M K +K G S++E+ G
Sbjct: 429 VLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGE 488
Query: 420 IHHFVAGDKDHDCSSDIYRMLETIGQGITAAGYPS 454
+H F GDK H + I + + I + + AGY +
Sbjct: 489 VHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKA 523
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 257/508 (50%), Gaps = 73/508 (14%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IR HA+ NS P ++ ++S M R F + T+ F L AC+ S L +H H
Sbjct: 88 LIRAHAQ-NSQPYQAFFVFSEMQRFGLFA--DNFTYPFLLKACS--GQSWLPVVKMMHNH 142
Query: 61 VVKLGFARDVFVRNALIHLYCECGS-SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNG 119
+ KLG + D++V NALI Y CG V ++FE+ + D V+WNS+L G+V+ G
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE---RDTVSWNSMLGGLVKAG 199
Query: 120 EIRDAEKVFDEMP-------------------------------ERDVVSWSTMIMGY-- 146
E+RDA ++FDEMP ER+ VSWSTM+MGY
Sbjct: 200 ELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSK 259
Query: 147 -------------------------------VQNGLLEDGLECFSVMREKGIRPNEXXXX 175
+ GLL++ M G++ +
Sbjct: 260 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 176 XXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK 235
G +HS ++ V AL+DMYAKCG ++K+ +F I K
Sbjct: 320 SILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 236 DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF 295
D+ +WN M+ GL HG K+A+ LF + EG P VTF+ VL +C+ GL+ EG YF
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF 439
Query: 296 NLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
M Y + P++EHYGC+VDLL R G + EA+ +++TM +EP+ V+W LL AC++H
Sbjct: 440 YSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNE 499
Query: 356 VDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVE 415
VD+ +++ + L++LDP G+Y L+ IYA A WE V +R M +K +G S VE
Sbjct: 500 VDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
Query: 416 LEGGIHHFVAGDKDHDCSSDIYRMLETI 443
LE GIH F DK H S IY+ML ++
Sbjct: 560 LEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 135/350 (38%), Gaps = 53/350 (15%)
Query: 89 SFKRVFEEEEDTL--CSDVVTWNSVLAGVVRNGEIRD-------------------AEKV 127
S +R+FEE L C+++ + A ++R D A +V
Sbjct: 14 SSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRV 73
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
F+++ E +V +++I + QN FS M+ G+ +
Sbjct: 74 FNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWL 133
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCG--CIEKSRALFESISGKDIWTWNVMIC 245
+ +H+ IE L + V AL+D Y++CG + + LFE +S +D +WN M+
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLG 193
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMG-------GLVSEGKRYFNLM 298
GL G +DA LF + I N G M + ++ M
Sbjct: 194 GLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTM 253
Query: 299 VDCYGIQPEMEHYGCMVDLL-----------------ARAGLVDEAVHLIETMT---VEP 338
V Y +ME M D + A GL+ EA L++ M ++
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 339 DPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYV--QLAGIYAK 386
D ++L AC G + +G +I + +++ + YV L +YAK
Sbjct: 314 DAAAVISILAACTESGLLSLGMRI-HSILKRSNLGSNAYVLNALLDMYAK 362
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/445 (39%), Positives = 242/445 (54%), Gaps = 45/445 (10%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
++ P ESI +YS M +RR +KPN+ TF F L AC + GL +G Q+ V+K GF
Sbjct: 90 SSDSPVESIWVYSEM--KRRGIKPNKLTFPFLLKACA--SFLGLTAGRQIQVEVLKHGFD 145
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
DV+V N LIHLY C + DA KV
Sbjct: 146 FDVYVGNNLIHLYGTCKKT-----------------------------------SDARKV 170
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
FDEM ER+VVSW++++ V+NG L ECF M K P+E
Sbjct: 171 FDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNL-- 228
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
G+ VHS + + + +GTALVDMYAK G +E +R +FE + K++WTW+ MI GL
Sbjct: 229 SLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGL 288
Query: 248 ASHGLAKDALALFHKFLSEGFI-PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
A +G A++AL LF K + E + P VTF+GVL ACS GLV +G +YF+ M + I+P
Sbjct: 289 AQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKP 348
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD---MGEKIG 363
M HYG MVD+L RAG ++EA I+ M EPD V+W TLL AC +H D +GEK+
Sbjct: 349 MMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVK 408
Query: 364 NKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHF 423
+LI+L+P G+ V +A +A+AR W + VR++M E KK+AG S +EL G H F
Sbjct: 409 KRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRF 468
Query: 424 VAGDKDHDCSSDIYRMLETIGQGIT 448
+G IY +L+ +T
Sbjct: 469 FSGYDPRSEYVSIYELLDLFKFQLT 493
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 41/297 (13%)
Query: 138 SWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTI 197
+W+ + GY + + + +S M+ +GI+PN+ GR + +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 198 ESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDAL 257
F V VG L+ +Y C +R +F+ ++ +++ +WN ++ L +G
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 258 ALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK---------------RYFNLMVDCY 302
F + + + F P T V +L+AC GG +S GK R +VD Y
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 303 GIQPEMEH---------------YGCMVDLLARAGLVDEAVHLIETM----TVEPDPVLW 343
+E+ + M+ LA+ G +EA+ L M +V P+ V +
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 344 ATLLDACKVHGFVDMGEKIGN---KLIQLDPM--HDGHYVQLAGIYAKARKWEDVVR 395
+L AC G VD G K + K+ ++ PM H G V + G + + D ++
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIK 374
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 298 bits (764), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/444 (34%), Positives = 257/444 (57%), Gaps = 11/444 (2%)
Query: 6 AKANSPPSESIAIYS--AMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVK 63
A ++S P + + +S ++ R +PN + L + T +S + + VH H+ K
Sbjct: 97 AYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKS-TPYLSSAFSTPL-VHTHLFK 154
Query: 64 LGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRD 123
GF V V+ AL+H Y S + +++F+E + +VV+W ++L+G R+G+I +
Sbjct: 155 SGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE---RNVVSWTAMLSGYARSGDISN 211
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXX 182
A +F++MPERDV SW+ ++ QNGL + + F M E IRPNE
Sbjct: 212 AVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACA 271
Query: 183 XXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNV 242
+ + +H+ V V +LVD+Y KCG +E++ ++F+ S K + WN
Sbjct: 272 QTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNS 331
Query: 243 MICGLASHGLAKDALALFHKFLS---EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV 299
MI A HG +++A+A+F + + P ++TF+G+LNAC+ GGLVS+G+ YF+LM
Sbjct: 332 MINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMT 391
Query: 300 DCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMG 359
+ +GI+P +EHYGC++DLL RAG DEA+ ++ TM ++ D +W +LL+ACK+HG +D+
Sbjct: 392 NRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLA 451
Query: 360 EKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGG 419
E L+ L+P + G+ +A +Y + WE+ R RK++ + + K GWS +E++
Sbjct: 452 EVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNE 511
Query: 420 IHHFVAGDKDHDCSSDIYRMLETI 443
+H F + DK H + +IY +L+++
Sbjct: 512 VHQFYSLDKSHPETEEIYMILDSL 535
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 298 bits (762), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 162/472 (34%), Positives = 255/472 (54%), Gaps = 34/472 (7%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
++R +++++ P + S+A++ M+R+ FV P+ +F F + A + L +G Q+H
Sbjct: 76 LVRGYSESDEPHN-SVAVFVEMMRKG-FVFPDSFSFAFVIKAVENFRS--LRTGFQMHCQ 131
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEE----------------------- 97
+K G +FV LI +Y CG VE ++VF+E
Sbjct: 132 ALKHGLESHLFVGTTLIGMYGGCGC-VEFARKVFDEMHQPNLVAWNAVITACFRGNDVAG 190
Query: 98 -----EDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLL 152
+ L + +WN +LAG ++ GE+ A+++F EMP RD VSWSTMI+G NG
Sbjct: 191 AREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSF 250
Query: 153 EDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTAL 212
+ F ++ G+ PNE E G+ +H +E + V V AL
Sbjct: 251 NESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNAL 310
Query: 213 VDMYAKCGCIEKSRALFESISGKD-IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
+DMY++CG + +R +FE + K I +W MI GLA HG ++A+ LF++ + G P
Sbjct: 311 IDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPD 370
Query: 272 NVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLI 331
++F+ +L+ACS GL+ EG+ YF+ M Y I+PE+EHYGCMVDL R+G + +A I
Sbjct: 371 GISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFI 430
Query: 332 ETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWE 391
M + P ++W TLL AC HG +++ E++ +L +LDP + G V L+ YA A KW+
Sbjct: 431 CQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWK 490
Query: 392 DVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETI 443
DV +RK MI + KK WSLVE+ ++ F AG+K + + L+ I
Sbjct: 491 DVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEI 542
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 157/462 (33%), Gaps = 137/462 (29%)
Query: 37 TFALHACTK--RAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVF 94
T A+H C + L + Q+H +K G D + LI C S+
Sbjct: 2 TIAIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLI---LHCAISI------- 51
Query: 95 EEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLED 154
SD + + A ++ PE D ++T++ GY ++ +
Sbjct: 52 --------SDALPY---------------ARRLLLCFPEPDAFMFNTLVRGYSESDEPHN 88
Query: 155 GLECFSVMREKG-IRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALV 213
+ F M KG + P+ G +H + VGT L+
Sbjct: 89 SVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLI 148
Query: 214 DMYAKCGCIEKSRALFESI----------------SGKDI---------------WTWNV 242
MY CGC+E +R +F+ + G D+ +WNV
Sbjct: 149 GMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNV 208
Query: 243 MICGLASHGLAKDALALFHKF--------------------LSEGFI-----------PV 271
M+ G G + A +F + +E F+ P
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 272 NVTFVGVLNACSMGGLVSEGK---------------RYFNLMVDCYG----------IQP 306
V+ GVL+ACS G GK N ++D Y +
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 307 EMEHYGCMVDLLAR-AGLV-----DEAVHLIETMT---VEPDPVLWATLLDACKVHGFVD 357
M+ C+V + AGL +EAV L MT V PD + + +LL AC G ++
Sbjct: 329 GMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIE 388
Query: 358 MGEKIGNKL-----IQLDPMHDGHYVQLAGIYAKARKWEDVV 394
GE +++ I+ + H G V L G K +K D +
Sbjct: 389 EGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFI 430
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/439 (35%), Positives = 243/439 (55%), Gaps = 8/439 (1%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
ESI + M R V P T L AC+K L +VH +V + + +
Sbjct: 219 ESIELLVEM--ERNLVSPTSVTLLLVLSACSKVKDKDLCK--RVHEYVSECKTEPSLRLE 274
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
NAL++ Y CG ++ R+F + DV++W S++ G V G ++ A FD+MP
Sbjct: 275 NALVNAYAACGE-MDIAVRIFRSMK---ARDVISWTSIVKGYVERGNLKLARTYFDQMPV 330
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
RD +SW+ MI GY++ G + LE F M+ G+ P+E E G ++
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI 390
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
+ I+ K + V VG AL+DMY KCGC EK++ +F + +D +TW M+ GLA++G
Sbjct: 391 KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
++A+ +F + P ++T++GVL+AC+ G+V + +++F M + I+P + HYGC
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGC 510
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMH 373
MVD+L RAGLV EA ++ M + P+ ++W LL A ++H M E K+++L+P +
Sbjct: 511 MVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDN 570
Query: 374 DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCS 433
Y L IYA ++W+D+ VR+ +++ KK G+SL+E+ G H FVAGDK H S
Sbjct: 571 GAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQS 630
Query: 434 SDIYRMLETIGQGITAAGY 452
+IY LE + Q T A Y
Sbjct: 631 EEIYMKLEELAQESTFAAY 649
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 9/258 (3%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
G + A K+F ++PE DVV W+ MI G+ + +G+ + M ++G+ P+
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 179 XXXXXXX-XXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI 237
CG+ +H + + V ALV MY+ CG ++ +R +F+ +D+
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL 297
++WN+MI G ++++ L + P +VT + VL+ACS KR
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 298 MVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
+ +C +P + +V+ A G +D AV + +M D + W ++ V G+V+
Sbjct: 262 VSEC-KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSI-----VKGYVE 314
Query: 358 MGE-KIGNKLIQLDPMHD 374
G K+ P+ D
Sbjct: 315 RGNLKLARTYFDQMPVRD 332
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 294 bits (753), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 250/441 (56%), Gaps = 6/441 (1%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
+S P +I+I+ ML VKP + T+ A + + G Q+H V+K G
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQAR--DGRQLHGMVIKEGLED 159
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D F+RN ++H+Y CG +E++ R+F + DVV WNS++ G + G I A+ +F
Sbjct: 160 DSFIRNTMLHMYVTCGCLIEAW-RIFL---GMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
DEMP+R+ VSW++MI G+V+NG +D L+ F M+EK ++P+ E
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
GR++H I +F + V TAL+DMY KCGCIE+ +FE K + WN MI GLA
Sbjct: 276 QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLA 335
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
++G + A+ LF + G P +V+F+GVL AC+ G V +F LM + Y I+P +
Sbjct: 336 NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSI 395
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
+HY MV++L AGL++EA LI+ M VE D V+W++LL AC+ G V+M ++ L +
Sbjct: 396 KHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKK 455
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
LDP YV L+ YA +E+ V R LM E+ +K G S +E++ +H F++
Sbjct: 456 LDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGG 515
Query: 429 DHDCSSDIYRMLETIGQGITA 449
H S++IY +L+ + ++
Sbjct: 516 THPKSAEIYSLLDILNWDVST 536
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 252/441 (57%), Gaps = 8/441 (1%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IR + NS + I IY +LR+ F P++ TF F +C + LG QVH H
Sbjct: 79 IIRAYTH-NSLYCDVIRIYKQLLRKS-FELPDRFTFPFMFKSCASLGSCYLGK--QVHGH 134
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+ K G V NALI +Y + V++ K VF+E + DV++WNS+L+G R G+
Sbjct: 135 LCKFGPRFHVVTENALIDMYMKFDDLVDAHK-VFDEMYE---RDVISWNSLLSGYARLGQ 190
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
++ A+ +F M ++ +VSW+ MI GY G + ++ F M+ GI P+E
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPS 250
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
E G+++H E F V AL++MY+KCG I ++ LF + GKD+ +W
Sbjct: 251 CAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 310
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
+ MI G A HG A A+ F++ P +TF+G+L+ACS G+ EG RYF++M
Sbjct: 311 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
Y I+P++EHYGC++D+LARAG ++ AV + +TM ++PD +W +LL +C+ G +D+
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Query: 361 KIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGI 420
+ L++L+P G+YV LA IYA KWEDV R+RK++ + KK G SL+E+ +
Sbjct: 431 VAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIV 490
Query: 421 HHFVAGDKDHDCSSDIYRMLE 441
FV+GD ++I +L+
Sbjct: 491 QEFVSGDNSKPFWTEISIVLQ 511
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 291 bits (744), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 238/461 (51%), Gaps = 43/461 (9%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V+P+ +TF L AC+ + + G ++H K+G + +FV N L+ +Y +CG E
Sbjct: 136 VRPDHYTFPCVLKACS--CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSE 193
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV--------------------- 127
+ + V +E DVV+WNS++ G +N DA +V
Sbjct: 194 A-RLVLDEMSR---RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 249
Query: 128 ----------------FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNE 171
F +M ++ +VSW+ MI Y++N + + +E +S M G P+
Sbjct: 250 AVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDA 309
Query: 172 XXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFES 231
G+ +H IE K + + AL+DMYAKCGC+EK+R +FE+
Sbjct: 310 VSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN 369
Query: 232 ISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEG 291
+ +D+ +W MI G DA+ALF K G +P ++ FV L ACS GL+ EG
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACK 351
+ F LM D Y I P +EH CMVDLL RAG V EA I+ M++EP+ +W LL AC+
Sbjct: 430 RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACR 489
Query: 352 VHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGW 411
VH D+G +KL QL P G+YV L+ IYAKA +WE+V +R +M K KK G
Sbjct: 490 VHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA 549
Query: 412 SLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
S VE+ IH F+ GD+ H S +IYR L+ + + + GY
Sbjct: 550 SNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGY 590
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 133/306 (43%), Gaps = 28/306 (9%)
Query: 120 EIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
++ A KVFDE+PER+V+ + MI YV NG +G++ F M +RP+
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
GR +H + + T+ VG LV MY KCG + ++R + + +S +D+ +
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 240 WNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV 299
WN ++ G A + DAL + + S T +L A S +E Y M
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS--NTTTENVMYVKDMF 266
Query: 300 DCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTV---EPDPVLWATLLDAC------ 350
G + + + M+ + + + EAV L M EPD V ++L AC
Sbjct: 267 FKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 351 ----KVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSK 406
K+HG+++ + I N L++ L +YAK E + R + S+
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLE---------NALIDMYAKCGCLE---KARDVFENMKSR 373
Query: 407 KVAGWS 412
V W+
Sbjct: 374 DVVSWT 379
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 2/224 (0%)
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASH 250
R VHS I R +G L+ YA + +R +F+ I +++ NVMI ++
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH 310
G + + +F P + TF VL ACS G + G++ G+ +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFV 177
Query: 311 YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLD 370
+V + + G + EA +++ M+ D V W +L+ + D ++ ++ +
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 371 PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLV 414
HD + E+V+ V+ + + K + W+++
Sbjct: 237 ISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVM 280
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 247/436 (56%), Gaps = 12/436 (2%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P +SI++Y MLR + P+ T+ F + + ++ + LG +H VVK G D+F
Sbjct: 89 PEKSISVYIQMLRFG--LLPDHMTYPFLMKSSSRLSNRKLGG--SLHCSVVKSGLEWDLF 144
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
+ N LIH+Y S +++F+E ++VTWNS+L ++G++ A VFDEM
Sbjct: 145 ICNTLIHMYGSFRDQA-SARKLFDEMPH---KNLVTWNSILDAYAKSGDVVSARLVFDEM 200
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECF-SVMREKGIRPNEXXXXXXXXXXXXXXXXECG 190
ERDVV+WS+MI GYV+ G LE F +MR + NE G
Sbjct: 201 SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 260
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALF--ESISGKDIWTWNVMICGLA 248
+ VH I + +TV + T+L+DMYAKCG I + ++F S+ D WN +I GLA
Sbjct: 261 KTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLA 320
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
SHG +++L LFHK P +TF+ +L ACS GGLV E +F + + G +P+
Sbjct: 321 SHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKS 379
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
EHY CMVD+L+RAGLV +A I M ++P + LL+ C HG +++ E +G KLI+
Sbjct: 380 EHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIE 439
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
L P +DG YV LA +YA +++ +R+ M +K KK+AG S+++L+G H F+A DK
Sbjct: 440 LQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDK 499
Query: 429 DHDCSSDIYRMLETIG 444
H S IY +L+ G
Sbjct: 500 THFHSDKIYAVLQLTG 515
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 288 bits (736), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 252/440 (57%), Gaps = 9/440 (2%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ +++ M+ V+P++ + A+ +C++ + G H +V++ GF +
Sbjct: 320 EALGVFNLMMDSG--VRPDRISMLSAISSCSQ--LRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
NALI +Y +C +F R+F+ + VVTWNS++AG V NGE+ A + F+ MPE
Sbjct: 376 NALIDMYMKCHRQDTAF-RIFDRMSN---KTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECF-SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+++VSW+T+I G VQ L E+ +E F S+ ++G+ + + ++
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
++ IE ++ V +GT LVDM+++CG E + ++F S++ +D+ W I +A G
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
A+ A+ LF + +G P V FVG L ACS GGLV +GK F M+ +G+ PE HYG
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPM 372
CMVDLL RAGL++EAV LIE M +EP+ V+W +LL AC+V G V+M K+ L P
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 373 HDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDC 432
G YV L+ +YA A +W D+ +VR M EK +K G S +++ G H F +GD+ H
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 433 SSDIYRMLETIGQGITAAGY 452
+I ML+ + Q + G+
Sbjct: 732 MPNIEAMLDEVSQRASHLGH 751
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 166/355 (46%), Gaps = 59/355 (16%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
+E+I ++ M+ + P+++TF F L AC K A G +G+Q+H +VK+G+A+D+FV
Sbjct: 116 NEAILLFLRMMNSG--ISPDKYTFPFGLSACAKSRAKG--NGIQIHGLIVKMGYAKDLFV 171
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+N+L+H Y ECG E+ A KVFDEM
Sbjct: 172 QNSLVHFYAECG-----------------------------------ELDSARKVFDEMS 196
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGR 191
ER+VVSW++MI GY + +D ++ F M R++ + PN E G
Sbjct: 197 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 256
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
V++ I + + + +ALVDMY KC I+ ++ LF+ ++ N M G
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG--IQPEME 309
L ++AL +F+ + G P ++ + +++CS + GK C+G ++ E
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK-------SCHGYVLRNGFE 369
Query: 310 HY----GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
+ ++D+ + D A + + M+ V W ++ V G+V+ GE
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSI-----VAGYVENGE 418
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 124/299 (41%), Gaps = 43/299 (14%)
Query: 43 CTKRAASGLGSGVQV------HAHVVKLGFARDVFVRNALIHLYCECGS--SVESFKRVF 94
CTK S L + + H + K G DV L+ CE G+ S+ K VF
Sbjct: 31 CTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVF 90
Query: 95 EEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLED 154
E E ++ + ++++I GY +GL +
Sbjct: 91 ENSE--------SYGTCFM-------------------------YNSLIRGYASSGLCNE 117
Query: 155 GLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVD 214
+ F M GI P++ G +H I + + + V +LV
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177
Query: 215 MYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL-SEGFIPVNV 273
YA+CG ++ +R +F+ +S +++ +W MICG A AKDA+ LF + + E P +V
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 274 TFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIE 332
T V V++AC+ + G++ + + + GI+ +VD+ + +D A L +
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 252/440 (57%), Gaps = 9/440 (2%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ +++ M+ V+P++ + A+ +C++ + G H +V++ GF +
Sbjct: 320 EALGVFNLMMDSG--VRPDRISMLSAISSCSQ--LRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
NALI +Y +C +F R+F+ + VVTWNS++AG V NGE+ A + F+ MPE
Sbjct: 376 NALIDMYMKCHRQDTAF-RIFDRMSN---KTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMR-EKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+++VSW+T+I G VQ L E+ +E F M+ ++G+ + + ++
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
++ IE ++ V +GT LVDM+++CG E + ++F S++ +D+ W I +A G
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
A+ A+ LF + +G P V FVG L ACS GGLV +GK F M+ +G+ PE HYG
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPM 372
CMVDLL RAGL++EAV LIE M +EP+ V+W +LL AC+V G V+M K+ L P
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 373 HDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDC 432
G YV L+ +YA A +W D+ +VR M EK +K G S +++ G H F +GD+ H
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 433 SSDIYRMLETIGQGITAAGY 452
+I ML+ + Q + G+
Sbjct: 732 MPNIEAMLDEVSQRASHLGH 751
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 166/355 (46%), Gaps = 59/355 (16%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
+E+I ++ M+ + P+++TF F L AC K A G +G+Q+H +VK+G+A+D+FV
Sbjct: 116 NEAILLFLRMMNSG--ISPDKYTFPFGLSACAKSRAKG--NGIQIHGLIVKMGYAKDLFV 171
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+N+L+H Y ECG E+ A KVFDEM
Sbjct: 172 QNSLVHFYAECG-----------------------------------ELDSARKVFDEMS 196
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGR 191
ER+VVSW++MI GY + +D ++ F M R++ + PN E G
Sbjct: 197 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 256
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
V++ I + + + +ALVDMY KC I+ ++ LF+ ++ N M G
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG--IQPEME 309
L ++AL +F+ + G P ++ + +++CS + GK C+G ++ E
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK-------SCHGYVLRNGFE 369
Query: 310 HY----GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
+ ++D+ + D A + + M+ V W ++ V G+V+ GE
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSI-----VAGYVENGE 418
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 124/299 (41%), Gaps = 43/299 (14%)
Query: 43 CTKRAASGLGSGVQV------HAHVVKLGFARDVFVRNALIHLYCECGS--SVESFKRVF 94
CTK S L + + H + K G DV L+ CE G+ S+ K VF
Sbjct: 31 CTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVF 90
Query: 95 EEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLED 154
E E ++ + ++++I GY +GL +
Sbjct: 91 ENSE--------SYGTCFM-------------------------YNSLIRGYASSGLCNE 117
Query: 155 GLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVD 214
+ F M GI P++ G +H I + + + V +LV
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177
Query: 215 MYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL-SEGFIPVNV 273
YA+CG ++ +R +F+ +S +++ +W MICG A AKDA+ LF + + E P +V
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 274 TFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIE 332
T V V++AC+ + G++ + + + GI+ +VD+ + +D A L +
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 256/452 (56%), Gaps = 30/452 (6%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKL-GFARDVFV 72
E+IA+Y M R+ + P TF+ L AC L G Q HA +L GF V+V
Sbjct: 132 EAIAMYGCM--RKEEITPVSFTFSALLKACG--TMKDLNLGRQFHAQTFRLRGFCF-VYV 186
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
N +I +Y +C S++ ++VF+E + DV++W ++A R G + A ++F+ +P
Sbjct: 187 GNTMIDMYVKC-ESIDCARKVFDEMPE---RDVISWTELIAAYARVGNMECAAELFESLP 242
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+D+V+W+ M+ G+ QN ++ LE F M + GIR +E C +
Sbjct: 243 TKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA--------CAQL 294
Query: 193 VHSTIESLKFRIT----------VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNV 242
S +I V +G+AL+DMY+KCG +E++ +F S++ K+++T++
Sbjct: 295 GASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSS 354
Query: 243 MICGLASHGLAKDALALFHKFLSEGFI-PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC 301
MI GLA+HG A++AL LFH +++ I P VTFVG L ACS GLV +G++ F+ M
Sbjct: 355 MILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQT 414
Query: 302 YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEK 361
+G+QP +HY CMVDLL R G + EA+ LI+TM+VEP +W LL AC++H ++ E
Sbjct: 415 FGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEI 474
Query: 362 IGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS-LVELEGGI 420
L +L+P G+Y+ L+ +YA A W V+RVRKL+ EK KK S +V+ G +
Sbjct: 475 AAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQM 534
Query: 421 HHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
H F G+ +H S+ I LE + + +T GY
Sbjct: 535 HKFFPGNLNHPMSNKIQDKLEELVERLTVLGY 566
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 145/415 (34%), Gaps = 104/415 (25%)
Query: 56 QVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGV 115
Q+H HV++ G + ++ LI + G ++ + R
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYAR----------------------- 103
Query: 116 VRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXX 175
+V + + R+ W+ +I GY G ++ + + MR++ I P
Sbjct: 104 ----------RVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFS 153
Query: 176 XXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRA-------- 227
GR H+ L+ V VG ++DMY KC I+ +R
Sbjct: 154 ALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER 213
Query: 228 -----------------------LFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL 264
LFES+ KD+ W M+ G A + ++AL F +
Sbjct: 214 DVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME 273
Query: 265 SEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL-----------------MVDCYGIQPE 307
G VT G ++AC+ G R + ++D Y
Sbjct: 274 KSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 308 MEH---------------YGCMVDLLARAGLVDEAVHLIETMT----VEPDPVLWATLLD 348
+E Y M+ LA G EA+HL M ++P+ V + L
Sbjct: 334 VEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALM 393
Query: 349 ACKVHGFVDMGEKIGNKLIQ---LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLM 400
AC G VD G ++ + + Q + P D HY + + + + ++ + + K M
Sbjct: 394 ACSHSGLVDQGRQVFDSMYQTFGVQPTRD-HYTCMVDLLGRTGRLQEALELIKTM 447
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 247/442 (55%), Gaps = 9/442 (2%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P +++ ++ M VK + T L AC K L G QV +++ + ++
Sbjct: 213 PDKALELFKKM--ESEDVKASHVTMVGVLSACAK--IRNLEFGRQVCSYIEENRVNVNLT 268
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
+ NA++ +Y +CGS +E KR+F+ E+ D VTW ++L G + + A +V + M
Sbjct: 269 LANAMLDMYTKCGS-IEDAKRLFDAMEE---KDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMR-EKGIRPNEXXXXXXXXXXXXXXXXECG 190
P++D+V+W+ +I Y QNG + L F ++ +K ++ N+ E G
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASH 250
R++HS I+ R+ V +AL+ MY+KCG +EKSR +F S+ +D++ W+ MI GLA H
Sbjct: 385 RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH 310
G +A+ +F+K P VTF V ACS GLV E + F+ M YGI PE +H
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504
Query: 311 YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLD 370
Y C+VD+L R+G +++AV IE M + P +W LL ACK+H +++ E +L++L+
Sbjct: 505 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564
Query: 371 PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDH 430
P +DG +V L+ IYAK KWE+V +RK M KK G S +E++G IH F++GD H
Sbjct: 565 PRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH 624
Query: 431 DCSSDIYRMLETIGQGITAAGY 452
S +Y L + + + + GY
Sbjct: 625 PMSEKVYGKLHEVMEKLKSNGY 646
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 169/386 (43%), Gaps = 73/386 (18%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IR +A + P SI + M+ + PN++TF F + A + S L G +H
Sbjct: 101 LIRAYA-SGPDPVLSIWAFLDMVSESQ-CYPNKYTFPFLIKAAAE--VSSLSLGQSLHGM 156
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
VK DVFV N+LIH Y CG ++S +VF ++ DVV+WNS++ G V+ G
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCG-DLDSACKVFTTIKE---KDVVSWNSMINGFVQKGS 212
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
A ++F +M DV + ++G + C +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLS--------ACAKIRN----------------- 247
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFE---------- 230
E GR V S IE + + + + A++DMY KCG IE ++ LF+
Sbjct: 248 ------LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 231 ---------------------SISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
S+ KDI WN +I +G +AL +FH+ + +
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 270 PVN-VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAV 328
+N +T V L+AC+ G + G R+ + + +GI+ ++ + ++ G ++++
Sbjct: 362 KLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSR 420
Query: 329 HLIETMTVEPDPVLWATLLDACKVHG 354
+ ++ + D +W+ ++ +HG
Sbjct: 421 EVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 141/363 (38%), Gaps = 43/363 (11%)
Query: 16 IAIYS-----AMLRRRRFVKPNQHTFTF--ALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
+AI+S ++ R F PNQ T + H L Q H H+++ G
Sbjct: 1 MAIFSTAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFS 60
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D + + L +A + + A KVF
Sbjct: 61 DPYSASKLF---------------------------------AMAALSSFASLEYARKVF 87
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECF-SVMREKGIRPNEXXXXXXXXXXXXXXXX 187
DE+P+ + +W+T+I Y + F ++ E PN+
Sbjct: 88 DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
G+ +H V V +L+ Y CG ++ + +F +I KD+ +WN MI G
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
G AL LF K SE +VT VGVL+AC+ + G++ + ++ +
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY-IEENRVNVN 266
Query: 308 MEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
+ M+D+ + G +++A L + M E D V W T+LD + + ++ N +
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 368 QLD 370
Q D
Sbjct: 326 QKD 328
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 245/434 (56%), Gaps = 6/434 (1%)
Query: 17 AIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNAL 76
AIY L VKP+ T + +C+ L G + + +V + G + + NAL
Sbjct: 241 AIYVYKLMESEGVKPDDVTMIGLVSSCS--MLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298
Query: 77 IHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDV 136
+ ++ +CG E+ +R+F+ E +V+W ++++G R G + + K+FD+M E+DV
Sbjct: 299 MDMFSKCGDIHEA-RRIFDNLEKR---TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 137 VSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHST 196
V W+ MI G VQ +D L F M+ +P+E + G ++H
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 197 IESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDA 256
IE + V +GT+LVDMYAKCG I ++ ++F I ++ T+ +I GLA HG A A
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 257 LALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVD 316
++ F++ + G P +TF+G+L+AC GG++ G+ YF+ M + + P+++HY MVD
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 317 LLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGH 376
LL RAGL++EA L+E+M +E D +W LL C++HG V++GEK KL++LDP G
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 594
Query: 377 YVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDI 436
YV L G+Y +A WED R R++M E+ +K+ G S +E+ G + F+ DK S I
Sbjct: 595 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKI 654
Query: 437 YRMLETIGQGITAA 450
Y L +G+ + ++
Sbjct: 655 YDRLHCLGRHMRSS 668
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 182/441 (41%), Gaps = 54/441 (12%)
Query: 12 PSESIAIYSAMLRRRRF-VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDV 70
P ES +Y MLR +P+ T+ C S LG + HV+KL
Sbjct: 134 PKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH--MILGHVLKLRLELVS 191
Query: 71 FVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDE 130
V NA IH++ CG +E+ ++VF+E + D+V+WN ++ G + GE A V+
Sbjct: 192 HVHNASIHMFASCG-DMENARKVFDE---SPVRDLVSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 131 MPERDVVSWSTMIMGYVQN----GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
M V ++G V + G L G E + ++E G+R
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGD 307
Query: 187 XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICG 246
R + +E + T+ T ++ YA+CG ++ SR LF+ + KD+ WN MI G
Sbjct: 308 IHEARRIFDNLE----KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGG 363
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
+DALALF + + P +T + L+ACS G + G + + ++ Y +
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-WIHRYIEKYSLSL 422
Query: 307 EMEHYGCMVDLLARAGLVDEAV---HLIETMT---------------------------- 335
+ +VD+ A+ G + EA+ H I+T
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI 482
Query: 336 ---VEPDPVLWATLLDACKVHGFVDMGEKIGNKL---IQLDPMHDGHYVQLAGIYAKARK 389
+ PD + + LL AC G + G +++ L+P HY + + +A
Sbjct: 483 DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLK-HYSIMVDLLGRAGL 541
Query: 390 WEDVVRVRKLMIEKVSKKVAG 410
E+ R+ + M + V G
Sbjct: 542 LEEADRLMESMPMEADAAVWG 562
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 116/248 (46%), Gaps = 5/248 (2%)
Query: 126 KVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGI---RPNEXXXXXXXXXXX 182
K+ + ++ SW+ I G+ ++ ++ + M G RP+
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 183 XXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNV 242
G + + L+ + V A + M+A CG +E +R +F+ +D+ +WN
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 243 MICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
+I G G A+ A+ ++ SEG P +VT +G++++CSM G ++ GK ++ + +
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE-N 286
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKI 362
G++ + ++D+ ++ G + EA + + + + V W T++ G +D+ K+
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISGYARCGLLDVSRKL 345
Query: 363 GNKLIQLD 370
+ + + D
Sbjct: 346 FDDMEEKD 353
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 246/488 (50%), Gaps = 71/488 (14%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCEC- 83
RR V P++HTF L A K S + Q HAH+VK G D FVRN+LI Y
Sbjct: 96 RRNGVIPSRHTFPPLLKAVFKLRDS---NPFQFHAHIVKFGLDSDPFVRNSLISGYSSSG 152
Query: 84 ------------------------------GSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
GS+ E+ E ++ + ++ +T SVL
Sbjct: 153 LFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLK 212
Query: 114 GVVRNGEIR------------------------------------DAEKVFDEMPERDVV 137
+ ++R DA+KVFDEMP R+VV
Sbjct: 213 AAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVV 272
Query: 138 SWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTI 197
+W+ +I GYVQ+ + G+ F M + + PNE GR VH +
Sbjct: 273 TWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM 332
Query: 198 ESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDAL 257
I GT L+D+Y KCGC+E++ +FE + K+++TW MI G A+HG A+DA
Sbjct: 333 IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAF 392
Query: 258 ALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDL 317
LF+ LS P VTF+ VL+AC+ GGLV EG+R F M + ++P+ +HY CMVDL
Sbjct: 393 DLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDL 452
Query: 318 LARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHY 377
R GL++EA LIE M +EP V+W L +C +H ++G+ +++I+L P H G Y
Sbjct: 453 FGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRY 512
Query: 378 VQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVA-GDKDHDCSSDI 436
LA +Y++++ W++V RVRK M ++ K G+S +E++G + F+A DK S D+
Sbjct: 513 TLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDL 572
Query: 437 YRMLETIG 444
Y+ L+T+G
Sbjct: 573 YKTLDTVG 580
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
+ + ++ ML+ V PN+ T + L AC A L G +VH +++K +
Sbjct: 289 KGMLVFEEMLKSD--VAPNEKTLSSVLSACAHVGA--LHRGRRVHCYMIKNSIEINTTAG 344
Query: 74 NALIHLYCECGSSVES---FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDE 130
LI LY +CG E+ F+R+ E+ +V TW +++ G +G RDA +F
Sbjct: 345 TTLIDLYVKCGCLEEAILVFERLHEK-------NVYTWTAMINGFAAHGYARDAFDLFYT 397
Query: 131 MPERDV----VSWSTMIMGYVQNGLLEDGLECFSVMR 163
M V V++ ++ GL+E+G F M+
Sbjct: 398 MLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMK 434
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 239/439 (54%), Gaps = 6/439 (1%)
Query: 15 SIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRN 74
++ I+S MLR + P++ T L AC L G Q+H+H+V GF V N
Sbjct: 262 ALDIFSKMLRDS-LLSPDRFTLASVLSACAN--LEKLCIGKQIHSHIVTTGFDISGIVLN 318
Query: 75 ALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER 134
ALI +Y CG VE+ +R+ E+ T + + ++L G ++ G++ A+ +F + +R
Sbjct: 319 ALISMYSRCGG-VETARRLIEQR-GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 135 DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVH 194
DVV+W+ MI+GY Q+G + + F M G RPN G+ +H
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 195 STIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS-GKDIWTWNVMICGLASHGLA 253
+ +V V AL+ MYAK G I + F+ I +D +W MI LA HG A
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
++AL LF L EG P ++T+VGV +AC+ GLV++G++YF++M D I P + HY C
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMH 373
MVDL RAGL+ EA IE M +EPD V W +LL AC+VH +D+G+ +L+ L+P +
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 374 DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCS 433
G Y LA +Y+ KWE+ ++RK M + KK G+S +E++ +H F D H
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEK 676
Query: 434 SDIYRMLETIGQGITAAGY 452
++IY ++ I I GY
Sbjct: 677 NEIYMTMKKIWDEIKKMGY 695
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 189/433 (43%), Gaps = 84/433 (19%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
++P Q T T L + A + +G +VH+ +VKLG +V V N+L+++Y +CG +
Sbjct: 142 IEPTQFTLTNVLASVA--ATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
+ K VF+ + D+ +WN+++A ++ G++ A F++M ERD+V+W++MI G+ Q
Sbjct: 200 A-KFVFDR---MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255
Query: 149 NGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
G L+ FS M R+ + P+ G+ +HS I + F I+
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315
Query: 208 VGTALVDMYAKCGCIEKSRALFE---------------------------------SISG 234
V AL+ MY++CG +E +R L E S+
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Query: 235 KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTF------------------- 275
+D+ W MI G HG +A+ LF + G P + T
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 276 ------------VGVLNAC----SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLA 319
V V NA + G ++ R F+L + C + + + M+ LA
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDL-IRC---ERDTVSWTSMIIALA 491
Query: 320 RAGLVDEAVHLIETMTVE---PDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD-- 374
+ G +EA+ L ETM +E PD + + + AC G V+ G + + + +D +
Sbjct: 492 QHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTL 551
Query: 375 GHYVQLAGIYAKA 387
HY + ++ +A
Sbjct: 552 SHYACMVDLFGRA 564
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 158/350 (45%), Gaps = 51/350 (14%)
Query: 48 ASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVT 107
++G + VH V+K G V++ N L+++Y + G ++ + +++F+E +
Sbjct: 27 SNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHA-RKLFDEMP---LRTAFS 82
Query: 108 WNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGI 167
WN+VL+ + G++ + FD++P+RD VSW+TMI+GY G + M ++GI
Sbjct: 83 WNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI 142
Query: 168 RPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKC-------- 219
P + E G+ VHS I L R V V +L++MYAKC
Sbjct: 143 EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 220 -----------------------GCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDA 256
G ++ + A FE ++ +DI TWN MI G G A
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 257 LALFHKFLSEGFI-PVNVTFVGVLNACSMGGLVSEGKRYFNLMV----DCYGIQPEMEHY 311
L +F K L + + P T VL+AC+ + GK+ + +V D GI
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV-----L 317
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVL-WATLLDACKVHGFVDMGE 360
++ + +R G V+ A LIE + + + LLD G++ +G+
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLD-----GYIKLGD 362
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 219/382 (57%), Gaps = 6/382 (1%)
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTL-CSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
NA++ Y + G +E K +F D + C +V TWN+++ G + G+I +A+ +FD+MP
Sbjct: 316 NAMLAGYVQ-GERMEMAKELF----DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+RD VSW+ MI GY Q+G + L F M +G R N E G+
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
+H + + VG AL+ MY KCG IE++ LF+ ++GKDI +WN MI G + HG
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 490
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
+ AL F EG P + T V VL+ACS GLV +G++YF M YG+ P +HY
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYA 550
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPM 372
CMVDLL RAGL+++A +L++ M EPD +W TLL A +VHG ++ E +K+ ++P
Sbjct: 551 CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPE 610
Query: 373 HDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDC 432
+ G YV L+ +YA + +W DV ++R M +K KKV G+S +E++ H F GD+ H
Sbjct: 611 NSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPE 670
Query: 433 SSDIYRMLETIGQGITAAGYPS 454
+I+ LE + + AGY S
Sbjct: 671 KDEIFAFLEELDLRMKKAGYVS 692
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 24/289 (8%)
Query: 75 ALIHLYCECGSSVESFKRVFEEEE--DTL-CSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
AL+ C G V+ K++ E + D++ DVV+WN+++ G ++G+I +A ++FDE
Sbjct: 218 ALVSWNCLLGGFVKK-KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDES 276
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
P +DV +W+ M+ GY+QN ++E+ E F M E+ NE E +
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAK 332
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+ + V ++ YA+CG I +++ LF+ + +D +W MI G + G
Sbjct: 333 ELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 388
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
+ +AL LF + EG +F L+ C+ + GK+ +V G +
Sbjct: 389 HSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG-GYET----- 442
Query: 312 GCMVD-----LLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
GC V + + G ++EA L + M + D V W T++ HGF
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGF 490
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 39/298 (13%)
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N +I Y G E +++F+E + D+V+WN ++ G VRN + A ++F+ MPE
Sbjct: 99 NGMISGYLRNGE-FELARKLFDEMPE---RDLVSWNVMIKGYVRNRNLGKARELFEIMPE 154
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREK--------------GIRPNEXXXXXXXX 179
RDV SW+TM+ GY QNG ++D F M EK + E
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 180 XXXXXXXXEC--GRFVHST--------IESLKFRITVPVGTALVDMYAKCGCIEKSRALF 229
C G FV +S+ R V T ++ YA+ G I+++R LF
Sbjct: 215 ENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNT-IITGYAQSGKIDEARQLF 273
Query: 230 ESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVS 289
+ +D++TW M+ G + + ++A LF K + N G + G +
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQ----GERME 329
Query: 290 EGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
K F++M C + + M+ A+ G + EA +L + M + DPV WA ++
Sbjct: 330 MAKELFDVM-PCRNVST----WNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMI 381
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 63/303 (20%)
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D+ N I Y G E+ RVF+ V++N +++G +RNGE A K+F
Sbjct: 63 DIKEWNVAISSYMRTGRCNEAL-RVFKRMPRW---SSVSYNGMISGYLRNGEFELARKLF 118
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
DEMPERD+VSW+ MI GYV+N L E F +M E+ +
Sbjct: 119 DEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDV--------------------- 157
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
C ++ YA+ GC++ +R++F+ + K+ +WN ++
Sbjct: 158 CS------------------WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYV 199
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVS-----EGKRYFNLMVDCYG 303
+ ++A LF + + N C +GG V E +++F+ M
Sbjct: 200 QNSKMEEACMLFKSRENWALVSWN---------CLLGGFVKKKKIVEARQFFDSMN---- 246
Query: 304 IQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIG 363
++ + ++ A++G +DEA L + V+ D W ++ + V+ ++
Sbjct: 247 -VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSGYIQNRMVEEARELF 304
Query: 364 NKL 366
+K+
Sbjct: 305 DKM 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
N+ +F+ AL C A LG Q+H +VK G+ FV NAL+ +YC+CG S+E
Sbjct: 408 NRSSFSSALSTCADVVALELGK--QLHGRLVKGGYETGCFVGNALLLMYCKCG-SIEEAN 464
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMGYV 147
+F+E D+V+WN+++AG R+G A + F+ M D + ++
Sbjct: 465 DLFKE---MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Query: 148 QNGLLEDGLECFSVM-REKGIRPN 170
GL++ G + F M ++ G+ PN
Sbjct: 522 HTGLVDKGRQYFYTMTQDYGVMPN 545
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/435 (37%), Positives = 245/435 (56%), Gaps = 11/435 (2%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P ESI +Y+ L ++P+ HTF F + S +H+ + GF D F
Sbjct: 63 PHESIVLYN--LLSFDGLRPSHHTFNFI--FAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
LI Y + G+ + +RVF+E DV WN+++ G R G+++ A ++FD M
Sbjct: 119 CCTTLITAYAKLGALCCA-RRVFDEMSK---RDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECG 190
P ++V SW+T+I G+ QNG + L+ F M ++K ++PN E G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESI-SGKDIWTWNVMICGLAS 249
R + F + V A ++MY+KCG I+ ++ LFE + + +++ +WN MI LA+
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
HG +AL LF + L EG P VTFVG+L AC GG+V +G+ F M + + I P++E
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
HYGCM+DLL R G + EA LI+TM ++PD V+W TLL AC HG V++ E L +L
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Query: 370 DPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS-LVELEGGIHHFVAGDK 428
+P + G+ V ++ IYA KW+ V+R+RKLM ++ K AG+S VE+ +H F DK
Sbjct: 415 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 474
Query: 429 DHDCSSDIYRMLETI 443
H S +IY++LE I
Sbjct: 475 SHPRSYEIYQVLEEI 489
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 282 bits (721), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 254/474 (53%), Gaps = 40/474 (8%)
Query: 10 SPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARD 69
S P S+ +Y MLR V P+ +T++ + A + AS G +Q AH+ K GF
Sbjct: 850 SHPIRSLELYVRMLRDS--VSPSSYTYSSLVKASS--FASRFGESLQ--AHIWKFGFGFH 903
Query: 70 VFVRNALIHLYCECG---------------------SSVESFKRVFE-EEEDTLCSDV-- 105
V ++ LI Y G + V +++RV + + ++L + +
Sbjct: 904 VKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSE 963
Query: 106 ---VTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM 162
T N ++ G + G + AE +F++MP +D++SW+TMI GY QN + + F M
Sbjct: 964 KNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM 1023
Query: 163 REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI 222
E+GI P+E E G+ VH F + V +G+ALVDMY+KCG +
Sbjct: 1024 MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSL 1083
Query: 223 EKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC 282
E++ +F ++ K+++ WN +I GLA+HG A++AL +F K E P VTFV V AC
Sbjct: 1084 ERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTAC 1143
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL 342
+ GLV EG+R + M+D Y I +EHYG MV L ++AGL+ EA+ LI M EP+ V+
Sbjct: 1144 THAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVI 1203
Query: 343 WATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVV----RVRK 398
W LLD C++H + + E NKL+ L+PM+ G+Y L +YA+ +W DV R+R+
Sbjct: 1204 WGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRE 1263
Query: 399 LMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
L IEK+ G S + ++ H F A DK H S ++ +L+ I + AGY
Sbjct: 1264 LGIEKI---CPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGY 1314
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 227/401 (56%), Gaps = 38/401 (9%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G +H+ V++ GF ++V+N+L+HLY CG
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCG----------------------------- 37
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
++ A KVFD+MPE+D+V+W+++I G+ +NG E+ L ++ M KGI+P+
Sbjct: 38 ------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS 233
G+ VH + + + L+D+YA+CG +E+++ LF+ +
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFL--SEGFIPVNVTFVGVLNACSMGGLVSEG 291
K+ +W +I GLA +G K+A+ LF K++ +EG +P +TFVG+L ACS G+V EG
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELF-KYMESTEGLLPCEITFVGILYACSHCGMVKEG 210
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACK 351
YF M + Y I+P +EH+GCMVDLLARAG V +A I++M ++P+ V+W TLL AC
Sbjct: 211 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 270
Query: 352 VHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGW 411
VHG D+ E +++QL+P H G YV L+ +YA ++W DV ++RK M+ KKV G
Sbjct: 271 VHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGH 330
Query: 412 SLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
SLVE+ +H F+ GDK H S IY L+ + + + GY
Sbjct: 331 SLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 371
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 13/162 (8%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N P E++A+Y+ M + +KP+ T L AC K A LG +VH +++K+G R
Sbjct: 67 NGKPEEALALYTEM--NSKGIKPDGFTIVSLLSACAKIGALTLGK--RVHVYMIKVGLTR 122
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
++ N L+ LY CG VE K +F+E D + V+W S++ G+ NG ++A ++F
Sbjct: 123 NLHSSNVLLDLYARCG-RVEEAKTLFDEMVD---KNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 129 DEMPERD-----VVSWSTMIMGYVQNGLLEDGLECFSVMREK 165
M + +++ ++ G++++G E F MRE+
Sbjct: 179 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 220
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 246/450 (54%), Gaps = 16/450 (3%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I C + N P E++ ++ ML R V+P++ T + AC + S + G +VH
Sbjct: 224 LITCFEQ-NGPAVEALDVFQMMLESR--VEPDEVTLASVISACA--SLSAIKVGQEVHGR 278
Query: 61 VVKLGFAR-DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNG 119
VVK R D+ + NA + +Y +C S ++ + +F+ +V+ S+++G
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKC-SRIKEARFIFDS---MPIRNVIAETSMISGYAMAA 334
Query: 120 EIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
+ A +F +M ER+VVSW+ +I GY QNG E+ L F +++ + + P
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 180 XXXXXXXXECGRFVHSTIESLKFRIT------VPVGTALVDMYAKCGCIEKSRALFESIS 233
G H + F+ + VG +L+DMY KCGC+E+ +F +
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR 293
+D +WN MI G A +G +AL LF + L G P ++T +GVL+AC G V EG+
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 294 YFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
YF+ M +G+ P +HY CMVDLL RAG ++EA +IE M ++PD V+W +LL ACKVH
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 354 GFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSL 413
+ +G+ + KL++++P + G YV L+ +YA+ KWEDV+ VRK M ++ K G S
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 414 VELEGGIHHFVAGDKDHDCSSDIYRMLETI 443
++++G H F+ DK H I+ +L+ +
Sbjct: 635 IKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 157/301 (52%), Gaps = 5/301 (1%)
Query: 36 FTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFE 95
F L +C K S + VHA V+K GF+ ++F++N LI Y +CGS +E ++VF+
Sbjct: 22 FAKLLDSCIKSKLSAIYVRY-VHASVIKSGFSNEIFIQNRLIDAYSKCGS-LEDGRQVFD 79
Query: 96 EEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDG 155
+ ++ TWNSV+ G+ + G + +A+ +F MPERD +W++M+ G+ Q+ E+
Sbjct: 80 KMPQR---NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 156 LECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDM 215
L F++M ++G NE G VHS I F V +G+ALVDM
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 216 YAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTF 275
Y+KCG + ++ +F+ + +++ +WN +I +G A +AL +F L P VT
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 276 VGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT 335
V++AC+ + G+ +V ++ ++ VD+ A+ + EA + ++M
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 336 V 336
+
Sbjct: 317 I 317
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 248/454 (54%), Gaps = 42/454 (9%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IR +A+ + S + ++Y M R V+P+ HT+ F + A T A LG +H+
Sbjct: 91 LIRGYAEIGNSIS-AFSLYREM-RVSGLVEPDTHTYPFLIKAVTTMADVRLGE--TIHSV 146
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
V++ GF ++V+N+L+HLY CG ++K VF++ + D+V WNSV+ G NG+
Sbjct: 147 VIRSGFGSLIYVQNSLLHLYANCGDVASAYK-VFDKMPE---KDLVAWNSVINGFAENGK 202
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
E+ L ++ M KGI+P+
Sbjct: 203 P-------------------------------EEALALYTEMNSKGIKPDGFTIVSLLSA 231
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
G+ VH + + + L+D+YA+CG +E+++ LF+ + K+ +W
Sbjct: 232 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 291
Query: 241 NVMICGLASHGLAKDALALFHKFL--SEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
+I GLA +G K+A+ LF K++ +EG +P +TFVG+L ACS G+V EG YF M
Sbjct: 292 TSLIVGLAVNGFGKEAIELF-KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 350
Query: 299 VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDM 358
+ Y I+P +EH+GCMVDLLARAG V +A I++M ++P+ V+W TLL AC VHG D+
Sbjct: 351 REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDL 410
Query: 359 GEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEG 418
E +++QL+P H G YV L+ +YA ++W DV ++RK M+ KKV G SLVE+
Sbjct: 411 AEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGN 470
Query: 419 GIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
+H F+ GDK H S IY L+ + + + GY
Sbjct: 471 RVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 504
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 4/234 (1%)
Query: 124 AEKVFDEMPER-DVVSWSTMIMGYVQNGLLEDGLECFSVMREKG-IRPNEXXXXXXXXXX 181
A KVF ++ + +V W+T+I GY + G + MR G + P+
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 182 XXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWN 241
G +HS + F + V +L+ +YA CG + + +F+ + KD+ WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 242 VMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC 301
+I G A +G ++ALAL+ + S+G P T V +L+AC+ G ++ GKR M+
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 302 YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
G+ + ++DL AR G V+EA L + M V+ + V W +L+ V+GF
Sbjct: 252 -GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGF 303
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 228/378 (60%), Gaps = 6/378 (1%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
RD+ + N +I Y E G+ +E+ + +F++ C DV++WN+VL G G++ E+V
Sbjct: 88 RDIVLWNTMISGYIEMGNMLEA-RSLFDQMP---CRDVMSWNTVLEGYANIGDMEACERV 143
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG-IRPNEXXXXXXXXXXXXXXX 186
FD+MPER+V SW+ +I GY QNG + + L F M ++G + PN+
Sbjct: 144 FDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGA 203
Query: 187 XECGRFVHSTIESLKF-RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMIC 245
+ G++VH E+L + ++ V V AL+DMY KCG IE + +F+ I +D+ +WN MI
Sbjct: 204 FDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 263
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
GLA+HG +AL LFH+ + G P VTFVGVL AC GLV +G YFN M + I
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIM 323
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNK 365
PE+EH GC+VDLL+RAG + +AV I M V+ D V+WATLL A KV+ VD+GE +
Sbjct: 324 PEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEE 383
Query: 366 LIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVA 425
LI+L+P + ++V L+ IY A +++D R++ M + KK AG S +E + G+ F +
Sbjct: 384 LIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYS 443
Query: 426 GDKDHDCSSDIYRMLETI 443
+ H + ++ R+L +
Sbjct: 444 SGEKHPRTEELQRILREL 461
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 122/291 (41%), Gaps = 74/291 (25%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
+VV W S++ G + N ++ A + FD PERD+V W+TMI GY++ G + LE S+
Sbjct: 58 NVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMG---NMLEARSLFD 114
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
+ R V +++ YA G +E
Sbjct: 115 QMPCRD------------------------------------VMSWNTVLEGYANIGDME 138
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG-FIPVNVTFVGVLNAC 282
+F+ + +++++WN +I G A +G + L F + + EG +P + T VL+AC
Sbjct: 139 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 283 SMGGLVSEGK----------------RYFNLMVDCYG----IQPEME-----------HY 311
+ G GK N ++D YG I+ ME +
Sbjct: 199 AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISW 258
Query: 312 GCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMG 359
M++ LA G EA++L M + PD V + +L ACK G V+ G
Sbjct: 259 NTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 19/170 (11%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I+ +A+ N SE + + M+ V PN T T L AC K A G VH +
Sbjct: 158 LIKGYAQ-NGRVSEVLGSFKRMVDEGSVV-PNDATMTLVLSACAKLGAFDFGK--WVHKY 213
Query: 61 VVKLGFAR-DVFVRNALIHLYCECGS---SVESFKRVFEEEEDTLCSDVVTWNSVLAGVV 116
LG+ + DV V+NALI +Y +CG+ ++E FK + D+++WN+++ G+
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR-------DLISWNTMINGLA 266
Query: 117 RNGEIRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVM 162
+G +A +F EM D V++ ++ GL+EDGL F+ M
Sbjct: 267 AHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 278 bits (711), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 242/425 (56%), Gaps = 6/425 (1%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARD-VFVRNALIHLYCECGSSV 87
V+PN TF L C + G +H + KLG R+ V V A+I +Y + G
Sbjct: 67 VEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR-F 125
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYV 147
+ + VF+ ED + VTWN+++ G +R+G++ +A K+FD+MPERD++SW+ MI G+V
Sbjct: 126 KKARLVFDYMED---KNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFV 182
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
+ G E+ L F M+ G++P+ G +VH + S F+ V
Sbjct: 183 KKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVR 242
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
V +L+D+Y +CGC+E +R +F ++ + + +WN +I G A++G A ++L F K +G
Sbjct: 243 VSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG 302
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
F P VTF G L ACS GLV EG RYF +M Y I P +EHYGC+VDL +RAG +++A
Sbjct: 303 FKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDA 362
Query: 328 VHLIETMTVEPDPVLWATLLDACKVHG-FVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAK 386
+ L+++M ++P+ V+ +LL AC HG + + E++ L L+ +YV L+ +YA
Sbjct: 363 LKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAA 422
Query: 387 ARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQG 446
KWE ++R+ M KK G+S +E++ +H F+AGD H ++ I +LE I
Sbjct: 423 DGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSD 482
Query: 447 ITAAG 451
+ G
Sbjct: 483 LRLQG 487
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 134/357 (37%), Gaps = 81/357 (22%)
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX--XXXXXXX 186
++ VSW++ I +NG L + + FS M G+ PN
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 187 XECGRFVHSTIESLKF-RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMIC 245
G +H L R V VGTA++ MY+K G +K+R +F+ + K+ TWN MI
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 246 GLASHGLAKDALALFHK---------------FLSEGFI----------------PVNVT 274
G G +A +F K F+ +G+ P V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 275 FVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH----YGCMVDLLARAGLVDEAVHL 330
+ LNAC+ G +S F L V Y + + ++ ++DL R G V+ A +
Sbjct: 209 IIAALNACTNLGALS-----FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 331 IETMT----------------------------------VEPDPVLWATLLDACKVHGFV 356
M +PD V + L AC G V
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 357 DMGEKIGNKL---IQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAG 410
+ G + + ++ P + HY L +Y++A + ED +++ + M K ++ V G
Sbjct: 324 EEGLRYFQIMKCDYRISPRIE-HYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIG 379
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 233/448 (52%), Gaps = 43/448 (9%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P +A Y ML V P+ +TFT + +C +A +G GV H H V GF D +
Sbjct: 88 PLHCVAYYRRMLSSN--VSPSNYTFTSVIKSCADLSALRIGKGV--HCHAVVSGFGLDTY 143
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V+ AL+ Y +CG ++ A +VFD M
Sbjct: 144 VQAALVTFYSKCG-----------------------------------DMEGARQVFDRM 168
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
PE+ +V+W++++ G+ QNGL ++ ++ F MRE G P+ G
Sbjct: 169 PEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGS 228
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+VH I S + V +GTAL+++Y++CG + K+R +F+ + ++ W MI +HG
Sbjct: 229 WVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHG 288
Query: 252 LAKDALALFHKFLSE-GFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH 310
+ A+ LF+K + G IP NVTFV VL+AC+ GLV EG+ + M Y + P +EH
Sbjct: 289 YGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEH 348
Query: 311 YGCMVDLLARAGLVDEA---VHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
+ CMVD+L RAG +DEA +H ++ P LW +L ACK+H D+G +I +LI
Sbjct: 349 HVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI 408
Query: 368 QLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGD 427
L+P + GH+V L+ IYA + K ++V +R M+ +K G+S++E+E + F GD
Sbjct: 409 ALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGD 468
Query: 428 KDHDCSSDIYRMLETIGQGITAAGYPSV 455
+ H + +IYR LET+ GY V
Sbjct: 469 ESHQETGEIYRYLETLISRCKEIGYAPV 496
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 94/248 (37%), Gaps = 45/248 (18%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E+I ++ M R +P+ TF L AC + A LGS VH +++ G
Sbjct: 186 NGLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGS--WVHQYIISEGLDL 241
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+V + ALI+LY CG ++ A +VF
Sbjct: 242 NVKLGTALINLYSRCG-----------------------------------DVGKAREVF 266
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREK-GIRPNEXXXXXXXXXXXXXXXX 187
D+M E +V +W+ MI Y +G + +E F+ M + G PN
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 188 ECGRFVHSTI-ESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT----WNV 242
E GR V+ + +S + V +VDM + G ++++ + T W
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTA 386
Query: 243 MICGLASH 250
M+ H
Sbjct: 387 MLGACKMH 394
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 240/443 (54%), Gaps = 51/443 (11%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P +++++Y+ M +R V P+++TFTF L AC+K +G H VV+ GF + +
Sbjct: 93 PEKTVSLYTEM--EKRGVSPDRYTFTFVLKACSK--LEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 72 VRNALIHLYCECGS---SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
V+NALI + CG + E F +D+ + V W+S+ +G + G+I +A ++F
Sbjct: 149 VKNALILFHANCGDLGIASELF-------DDSAKAHKVAWSSMTSGYAKRGKIDEAMRLF 201
Query: 129 DEMP-------------------------------ERDVVSWSTMIMGYVQNGLLEDGLE 157
DEMP E+DVV+W+ MI GYV G ++ L
Sbjct: 202 DEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALG 261
Query: 158 CFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTI-----ESLKFRITVPVGTAL 212
F MR+ G P+ E G+ +H I S + P+ AL
Sbjct: 262 IFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNAL 321
Query: 213 VDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN 272
+DMYAKCG I+++ +F + +D+ TWN +I GLA H A+ ++ +F + P
Sbjct: 322 IDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNE 380
Query: 273 VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIE 332
VTF+GV+ ACS G V EG++YF+LM D Y I+P ++HYGCMVD+L RAG ++EA +E
Sbjct: 381 VTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVE 440
Query: 333 TMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWED 392
+M +EP+ ++W TLL ACK++G V++G+ KL+ + G YV L+ IYA +W+
Sbjct: 441 SMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDG 500
Query: 393 VVRVRKLMIEKVSKKVAGWSLVE 415
V +VRK+ + KK G SL+E
Sbjct: 501 VQKVRKMFDDTRVKKPTGVSLIE 523
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 125/318 (39%), Gaps = 22/318 (6%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
G ++ A K+FDE+P+ DV + ++ G Q+ E + ++ M ++G+ P+
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 179 XXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIW 238
G H + F + V AL+ +A CG + + LF+ +
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 239 TWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
W+ M G A G +A+ LF + + + NV G L M R+
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRF---- 235
Query: 299 VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGF 355
+ ++ + M+ G EA+ + + M PD V +LL AC V G
Sbjct: 236 -----TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 356 VDMGEKIGNKLIQLDPMHDGHYV------QLAGIYAKA----RKWEDVVRVRKLMIEKVS 405
++ G+++ +++ + YV L +YAK R E V+ + +
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWN 350
Query: 406 KKVAGWSLVELEGGIHHF 423
+ G +L EG I F
Sbjct: 351 TLIVGLALHHAEGSIEMF 368
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 243/465 (52%), Gaps = 52/465 (11%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IR A S E+ +Y ML R P++HTF F L AC G G QVH
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGE-SSPDKHTFPFVLKACA--YIFGFSEGKQVHCQ 176
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+VK GF DV+V N LIHLY CG C D+
Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCG-----------------CLDL--------------- 204
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
A KVFDEMPER +VSW++MI V+ G + L+ F M ++ P+
Sbjct: 205 ---ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSA 260
Query: 181 XXXXXXXECGRFVHSTIE---SLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI 237
G + H+ + + + V V +L++MY KCG + + +F+ + +D+
Sbjct: 261 CAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDL 320
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLS--EGFIPVNVTFVGVLNACSMGGLVSEGKRYF 295
+WN MI G A+HG A++A+ F + + E P +VTFVG+L AC+ G V++G++YF
Sbjct: 321 ASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYF 380
Query: 296 NLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA-CKVHG 354
++MV Y I+P +EHYGC+VDL+ARAG + EA+ ++ +M ++PD V+W +LLDA CK
Sbjct: 381 DMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA 440
Query: 355 FVDMGEKIGNKLIQLDPMHD-------GHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKK 407
V++ E+I +I ++ G YV L+ +YA A +W DV VRKLM E +K
Sbjct: 441 SVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRK 500
Query: 408 VAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
G S +E+ G H F AGD H + IY+ L+ I + + GY
Sbjct: 501 EPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 545
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 137/342 (40%), Gaps = 49/342 (14%)
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
+ + + EE TL + +L ++ A +VFD + W+T+I
Sbjct: 71 TLRTTYPEEPATL----FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAH 126
Query: 149 N-GLLEDGLECFSVMREKG-IRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITV 206
+ E+ + M E+G P++ G+ VH I F V
Sbjct: 127 DVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDV 186
Query: 207 PVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSE 266
V L+ +Y CGC++ +R +F+ + + + +WN MI L G AL LF + +
Sbjct: 187 YVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE-MQR 245
Query: 267 GFIPVNVTFVGVLNACSMGGLVSEGKRYF------------------NLMVDCY------ 302
F P T VL+AC+ G +S G N +++ Y
Sbjct: 246 SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 305
Query: 303 --------GIQP-EMEHYGCMVDLLARAGLVDEAVHLIETM-----TVEPDPVLWATLLD 348
G+Q ++ + M+ A G +EA++ + M V P+ V + LL
Sbjct: 306 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 365
Query: 349 ACKVHGFVDMGEKIGNKLIQ---LDPMHDGHYVQLAGIYAKA 387
AC GFV+ G + + +++ ++P + HY + + A+A
Sbjct: 366 ACNHRGFVNKGRQYFDMMVRDYCIEPALE-HYGCIVDLIARA 406
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 250/451 (55%), Gaps = 8/451 (1%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MIR + + P + SIAI KP+ TF F L + S + G Q+H
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVR--VSDVWFGRQIHGQ 141
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
VV GF V V LI +Y CG ++ +++F+E L DV WN++LAG + GE
Sbjct: 142 VVVFGFDSSVHVVTGLIQMYFSCGGLGDA-RKMFDE---MLVKDVNVWNALLAGYGKVGE 197
Query: 121 IRDAEKVFDEMP--ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
+ +A + + MP R+ VSW+ +I GY ++G + +E F M + + P+E
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257
Query: 179 XXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIW 238
E G + S ++ V + A++DMYAK G I K+ +FE ++ +++
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317
Query: 239 TWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
TW +I GLA+HG +ALA+F++ + G P +VTF+ +L+ACS G V GKR FN M
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 299 VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDM 358
YGI P +EHYGCM+DLL RAG + EA +I++M + + +W +LL A VH +++
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437
Query: 359 GEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEG 418
GE+ ++LI+L+P + G+Y+ LA +Y+ +W++ +R +M KK+AG S +E+E
Sbjct: 438 GERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
Query: 419 GIHHFVAGDKDHDCSSDIYRMLETIGQGITA 449
++ F++GD H I+ +L+ + I +
Sbjct: 498 RVYKFISGDLTHPQVERIHEILQEMDLQIQS 528
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 241/427 (56%), Gaps = 13/427 (3%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF---VRNALIHLYCECGS 85
++ ++ T+ + AC A L G QVHA+V++ R+ F N+L+ LY +CG
Sbjct: 282 IELDEFTYPSVIRACA--TAGLLQLGKQVHAYVLR----REDFSFHFDNSLVSLYYKCGK 335
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
E+ + +FE+ D+V+WN++L+G V +G I +A+ +F EM E++++SW MI G
Sbjct: 336 FDEA-RAIFEKMP---AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
+NG E+GL+ FS M+ +G P + G+ H+ + + F +
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
+ G AL+ MYAKCG +E++R +F ++ D +WN +I L HG +A+ ++ + L
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
+G P +T + VL ACS GLV +G++YF+ M Y I P +HY ++DLL R+G
Sbjct: 512 KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFS 571
Query: 326 EAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYA 385
+A +IE++ +P +W LL C+VHG +++G +KL L P HDG Y+ L+ ++A
Sbjct: 572 DAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHA 631
Query: 386 KARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQ 445
+WE+V RVRKLM ++ KK S +E+E +H F+ D H + +Y L+ +G+
Sbjct: 632 ATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGK 691
Query: 446 GITAAGY 452
+ GY
Sbjct: 692 EMRRLGY 698
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 183/442 (41%), Gaps = 85/442 (19%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSS--- 86
KP+ TF L A A VQ HA +K G V NAL+ +Y +C SS
Sbjct: 145 KPDNFTFASVL-AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 87 VESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER-DVVSWSTMIMG 145
+ S ++VF+E L D +W +++ G V+NG E++ + M + +V+++ MI G
Sbjct: 204 LHSARKVFDE---ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTI---ESLKF 202
YV G ++ LE M GI +E + G+ VH+ + E F
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF 320
Query: 203 RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWN--------------------- 241
+LV +Y KCG +++RA+FE + KD+ +WN
Sbjct: 321 HFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 242 ----------VMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEG 291
+MI GLA +G ++ L LF EGF P + F G + +C++ G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---------------- 335
++Y ++ G + ++ + A+ G+V+EA + TM
Sbjct: 437 QQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495
Query: 336 ------------------VEPDPVLWATLLDACKVHGFVDMGEKIGNKL---IQLDPMHD 374
+ PD + T+L AC G VD G K + + ++ P D
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGAD 555
Query: 375 GHYVQLAGIYAKARKWEDVVRV 396
HY +L + ++ K+ D V
Sbjct: 556 -HYARLIDLLCRSGKFSDAESV 576
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 156/383 (40%), Gaps = 59/383 (15%)
Query: 28 FVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSV 87
V+ + + L C + L VH +++ GF + N LI +YC+ S +
Sbjct: 7 LVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCK-SSEL 65
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP--ERDVVSWSTMIMG 145
+++F+E + D + ++++G +G+I A VF++ P RD V ++ MI G
Sbjct: 66 NYARQLFDEISE---PDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITG 122
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE--CGRFVHSTIESLKFR 203
+ N + F M+ +G +P+ E C +F + ++S
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGY 182
Query: 204 ITVPVGTALVDMYAKCGC----IEKSRALFESISGKDIWTW------------------- 240
IT V ALV +Y+KC + +R +F+ I KD +W
Sbjct: 183 IT-SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL 241
Query: 241 -------------NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGL 287
N MI G + G ++AL + + +S G T+ V+ AC+ GL
Sbjct: 242 LEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHY---GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWA 344
+ GK+ V Y ++ E + +V L + G DEA + E M + D V W
Sbjct: 302 LQLGKQ-----VHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWN 355
Query: 345 TLLDACKVHGFVDMGEKIGNKLI 367
LL G+V G KLI
Sbjct: 356 ALLS-----GYVSSGHIGEAKLI 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 94/236 (39%), Gaps = 18/236 (7%)
Query: 210 TALVDMYAKCGCIEKSRALFES--ISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
T +V Y G I +R +FE + +D +N MI G + + A+ LF K EG
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
F P N TF VL ++ + F+ G +V + ++
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 328 VHLIETM---TVEPDPVLWATLLDACKVHGFVDMGEKI------GNKLIQLDPMHDGHYV 378
+H + +E D W T++ +G+ D+GE++ KL+ + M G+
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 379 QLAGIYAKA-----RKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKD 429
+ G Y +A R + + + V + A L++L +H +V +D
Sbjct: 264 R--GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED 317
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/433 (33%), Positives = 241/433 (55%), Gaps = 12/433 (2%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
++ +++Y M+ V P+ + T L AC + ++HA V+KLGF V
Sbjct: 109 ADGVSLYHRMIHNS--VLPDNYVITSVLKACDLKVCR------EIHAQVLKLGFGSSRSV 160
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
++ +Y + G V + K++F+E D D V ++ G I++A ++F ++
Sbjct: 161 GLKMMEIYGKSGELVNA-KKMFDEMPD---RDHVAATVMINCYSECGFIKEALELFQDVK 216
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+D V W+ MI G V+N + LE F M+ + + NE E GR+
Sbjct: 217 IKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRW 276
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
VHS +E+ + ++ VG AL++MY++CG I ++R +F + KD+ ++N MI GLA HG
Sbjct: 277 VHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGA 336
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
+ +A+ F ++ GF P VT V +LNACS GGL+ G FN M + ++P++EHYG
Sbjct: 337 SVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYG 396
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPM 372
C+VDLL R G ++EA IE + +EPD ++ TLL ACK+HG +++GEKI +L + +
Sbjct: 397 CIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENP 456
Query: 373 HDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDC 432
G YV L+ +YA + KW++ +R+ M + +K G S +E++ IH F+ GD H
Sbjct: 457 DSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPH 516
Query: 433 SSDIYRMLETIGQ 445
IY+ L+ + +
Sbjct: 517 KEAIYQRLQELNR 529
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 190/334 (56%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
EI A K+FDE PE+ + SW+ MI GY QNGL ED + F M++ PN
Sbjct: 368 NEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCIL 427
Query: 179 XXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIW 238
G++VH + S F ++ V TAL+ MYAKCG I ++R LF+ ++ K+
Sbjct: 428 SACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV 487
Query: 239 TWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
TWN MI G HG ++AL +F++ L+ G P VTF+ VL ACS GLV EG FN M
Sbjct: 488 TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Query: 299 VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDM 358
+ YG +P ++HY CMVD+L RAG + A+ IE M++EP +W TLL AC++H ++
Sbjct: 548 IHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNL 607
Query: 359 GEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEG 418
+ KL +LDP + G++V L+ I++ R + VR+ ++ K G++L+E+
Sbjct: 608 ARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGE 667
Query: 419 GIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
H F +GD+ H +IY LE + + AGY
Sbjct: 668 TPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGY 701
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 167/412 (40%), Gaps = 73/412 (17%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACT-------------KRAASGLGSGV 55
N P S++++ A LR+ +KPN T+ FA+ A + + G S +
Sbjct: 96 NESPHSSLSVF-AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSEL 154
Query: 56 QVHAHVVKLGF-------ARDVFVR---------NALIHLYCECGSSVESFKRVFEEEED 99
+ +++VK+ F AR VF R N +I Y + VES + VF + +
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQ-VFRDLIN 213
Query: 100 TLCS--DVVTWNSVLAGVV-----------------------------------RNGEIR 122
C+ D T +L V + G+I+
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 123 DAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXX 182
+F E + D+V+++ MI GY NG E L F + G R
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 183 XXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNV 242
+H F V TAL +Y+K IE +R LF+ K + +WN
Sbjct: 334 HLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 243 MICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
MI G +GL +DA++LF + F P VT +L+AC+ G +S GK + + +V
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRST 449
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
+ + ++ + A+ G + EA L + MT + + V W T++ +HG
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLHG 500
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 43/234 (18%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N ++I+++ M ++ PN T T L AC + A LG VH V F
Sbjct: 398 NGLTEDAISLFREM--QKSEFSPNPVTITCILSACAQLGALSLGK--WVHDLVRSTDFES 453
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
++V ALI +Y +CGS I +A ++F
Sbjct: 454 SIYVSTALIGMYAKCGS-----------------------------------IAEARRLF 478
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
D M +++ V+W+TMI GY +G ++ L F M GI P +
Sbjct: 479 DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538
Query: 189 CG-RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS---GKDIW 238
G +S I F +V +VD+ + G ++++ E++S G +W
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVW 592
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 99/246 (40%), Gaps = 13/246 (5%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREK-GIRPNEXXXXXX 177
G I A +F + DV ++ ++ G+ N L F+ +R+ ++PN
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 178 XXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI 237
GR +H + +G+ +V MY K +E +R +F+ + KD
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN-VTFVGVLNACSMGGLVSEGKRYFN 296
WN MI G + + +++ +F ++E ++ T + +L A + + G + +
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 297 LMVD--CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
L CY + + + L ++ G + L +PD V + + +HG
Sbjct: 246 LATKTGCYSHDYVLTGF---ISLYSKCGKIKMGSALFREFR-KPDIVAYNAM-----IHG 296
Query: 355 FVDMGE 360
+ GE
Sbjct: 297 YTSNGE 302
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 235/424 (55%), Gaps = 6/424 (1%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V P++ + AC + + ++ +++ D + AL+ +Y G+
Sbjct: 208 VMPDEMILCNIVSACGR--TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYA--GAGCM 263
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
R F + ++ ++++G + G + DA+ +FD+ ++D+V W+TMI YV+
Sbjct: 264 DMAREFFRKMSV--RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVE 321
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
+ ++ L F M GI+P+ + ++VHS I + +
Sbjct: 322 SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI 381
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
AL++MYAKCG ++ +R +FE + +++ +W+ MI L+ HG A DAL+LF + E
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAV 328
P VTFVGVL CS GLV EGK+ F M D Y I P++EHYGCMVDL RA L+ EA+
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 329 HLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKAR 388
+IE+M V + V+W +L+ AC++HG +++G+ ++++L+P HDG V ++ IYA+ +
Sbjct: 502 EVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQ 561
Query: 389 KWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGIT 448
+WEDV +R++M EK K G S ++ G H F+ GDK H S++IY L+ + +
Sbjct: 562 RWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLK 621
Query: 449 AAGY 452
AGY
Sbjct: 622 LAGY 625
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 76/379 (20%)
Query: 9 NSPPSESIAIYSAMLRRRRFV--KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGF 66
+S P +I Y +R R V + +Q +F L A +K S L G+++H K+
Sbjct: 89 SSEPRATILFY----QRIRHVGGRLDQFSFLPILKAVSK--VSALFEGMELHGVAFKIAT 142
Query: 67 ARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEK 126
D FV + +Y CG I A
Sbjct: 143 LCDPFVETGFMDMYASCG-----------------------------------RINYARN 167
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
VFDEM RDVV+W+TMI Y + GL+++ + F M++ + P+E
Sbjct: 168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN 227
Query: 187 XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS------------- 233
R ++ + R+ + TALV MYA GC++ +R F +S
Sbjct: 228 MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSG 287
Query: 234 ------------------GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTF 275
KD+ W MI ++AL +F + G P V+
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 276 VGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT 335
V++AC+ G++ + K + + + G++ E+ ++++ A+ G +D + E M
Sbjct: 348 FSVISACANLGILDKAK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Query: 336 VEPDPVLWATLLDACKVHG 354
+ V W+++++A +HG
Sbjct: 407 -RRNVVSWSSMINALSMHG 424
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 219/412 (53%), Gaps = 36/412 (8%)
Query: 50 GLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWN 109
+ G QVHA+ +K G+ D++V + ++ +Y +CG
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCG------------------------- 566
Query: 110 SVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRP 169
++ A+ FD +P D V+W+TMI G ++NG E FS MR G+ P
Sbjct: 567 ----------DMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616
Query: 170 NEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALF 229
+E E GR +H+ L VGT+LVDMYAKCG I+ + LF
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF 676
Query: 230 ESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVS 289
+ I +I WN M+ GLA HG K+ L LF + S G P VTF+GVL+ACS GLVS
Sbjct: 677 KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736
Query: 290 EGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
E ++ M YGI+PE+EHY C+ D L RAGLV +A +LIE+M++E ++ TLL A
Sbjct: 737 EAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAA 796
Query: 350 CKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVA 409
C+V G + G+++ KL++L+P+ YV L+ +YA A KW+++ R +M KK
Sbjct: 797 CRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 856
Query: 410 GWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY-PSVHLTCV 460
G+S +E++ IH FV D+ + + IYR ++ + + I GY P T V
Sbjct: 857 GFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLV 908
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 146/351 (41%), Gaps = 51/351 (14%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E++ ++ +LR +KP+Q+T T L A + GL QVH H +K+
Sbjct: 394 NGLEVEAVCLFMQLLRCG--LKPDQYTMTSVLKAASS-LPEGLSLSKQVHVHAIKINNVS 450
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D FV ALI Y RN +++AE +F
Sbjct: 451 DSFVSTALIDAYS-----------------------------------RNRCMKEAEILF 475
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
E D+V+W+ M+ GY Q+ L+ F++M ++G R ++
Sbjct: 476 -ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G+ VH+ + + + V + ++DMY KCG + ++ F+SI D W MI G
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF--NLMVDCYGIQP 306
+G + A +F + G +P T + A S + +G++ L ++C P
Sbjct: 595 ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN-DP 653
Query: 307 EMEHYGCMVDLLARAGLVDEAVHL---IETMTVEPDPVLWATLLDACKVHG 354
+ +VD+ A+ G +D+A L IE M + W +L HG
Sbjct: 654 FVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITA----WNAMLVGLAQHG 698
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 129/319 (40%), Gaps = 39/319 (12%)
Query: 37 TFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKR-VFE 95
TF L T L G QVH +KLG + V N+LI++YC+ F R VF+
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKF--GFARTVFD 374
Query: 96 EEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDG 155
+ D+++WNSV+AG+ +NG +A +F M ++ GL D
Sbjct: 375 NMSE---RDLISWNSVIAGIAQNGLEVEAVCLF---------------MQLLRCGLKPDQ 416
Query: 156 LECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDM 215
SV++ P + VH + V TAL+D
Sbjct: 417 YTMTSVLKAASSLPE---------------GLSLSKQVHVHAIKINNVSDSFVSTALIDA 461
Query: 216 YAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTF 275
Y++ C++++ LFE D+ WN M+ G L LF +G + T
Sbjct: 462 YSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 276 VGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT 335
V C +++GK+ + G ++ ++D+ + G + A +++
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 336 VEPDPVLWATLLDACKVHG 354
V PD V W T++ C +G
Sbjct: 580 V-PDDVAWTTMISGCIENG 597
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 108/264 (40%), Gaps = 42/264 (15%)
Query: 58 HAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVR 117
H + K+G D FV AL+++Y + G V+ K +FEE DVV WN +L +
Sbjct: 168 HGYACKIGLDGDEFVAGALVNIYLKFGK-VKEGKVLFEEMP---YRDVVLWNLMLKAYLE 223
Query: 118 --------------------------------NGEIRDAEKVFDEMPERDVVSWSTMIM- 144
+G+ DA +V D S S +I
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFR 283
Query: 145 -----GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIES 199
Y+ +G L+CF+ M E + ++ G+ VH
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 200 LKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALAL 259
L + + V +L++MY K +R +F+++S +D+ +WN +I G+A +GL +A+ L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 260 FHKFLSEGFIPVNVTFVGVLNACS 283
F + L G P T VL A S
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 19/169 (11%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N + ++S M R V P++ FT A A + L G Q+HA+ +KL
Sbjct: 596 NGEEERAFHVFSQM--RLMGVLPDE--FTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 69 DVFVRNALIHLYCECGSSVES---FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAE 125
D FV +L+ +Y +CGS ++ FKR+ ++ WN++L G+ ++GE ++
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRI-------EMMNITAWNAMLVGLAQHGEGKETL 704
Query: 126 KVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECFSVMR-EKGIRP 169
++F +M + D V++ ++ +GL+ + + M + GI+P
Sbjct: 705 QLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKP 753
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 226/424 (53%), Gaps = 37/424 (8%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+ P+ +TF L AC A L G Q+H +KLG +V+V LI++Y EC
Sbjct: 125 ILPDNYTFPSLLKACA--VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTEC----- 177
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
ED + A VFD + E VV ++ MI GY +
Sbjct: 178 ---------ED---------------------VDSARCVFDRIVEPCVVCYNAMITGYAR 207
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
+ L F M+ K ++PNE + G+++H + F V V
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKV 267
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
TAL+DM+AKCG ++ + ++FE + KD W+ MI A+HG A+ ++ +F + SE
Sbjct: 268 NTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV 327
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAV 328
P +TF+G+LNACS G V EG++YF+ MV +GI P ++HYG MVDLL+RAG +++A
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 387
Query: 329 HLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKAR 388
I+ + + P P+LW LL AC H +D+ EK+ ++ +LD H G YV L+ +YA+ +
Sbjct: 388 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 447
Query: 389 KWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGIT 448
KWE V +RK+M ++ + KV G S +E+ +H F +GD ++ ++R L+ + + +
Sbjct: 448 KWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELK 507
Query: 449 AAGY 452
+GY
Sbjct: 508 LSGY 511
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 18/257 (7%)
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSV---MREKGIRPNEXXXXXXXXX 180
A +F+ M E D+V +++M GY + + LE FS+ + E GI P+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSR---FTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
E GR +H L V V L++MY +C ++ +R +F+ I + +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK---RYFNL 297
N MI G A +AL+LF + + P +T + VL++C++ G + GK +Y
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 298 MVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
C ++ ++D+ A+ G +D+AV + E M + D W+ ++ A HG +
Sbjct: 259 HSFCKYVKVNT----ALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAE 313
Query: 358 ----MGEKIGNKLIQLD 370
M E++ ++ +Q D
Sbjct: 314 KSMLMFERMRSENVQPD 330
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 210/380 (55%), Gaps = 5/380 (1%)
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP- 132
NA+I Y ECG +E F+ VV W +++ G ++ ++ AE +F +M
Sbjct: 190 NAMISGYIECGD-LEKASHFFKVAP---VRGVVAWTAMITGYMKAKKVELAEAMFKDMTV 245
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+++V+W+ MI GYV+N EDGL+ F M E+GIRPN + GR
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQ 305
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
+H + V T+L+ MY KCG + + LFE + KD+ WN MI G A HG
Sbjct: 306 IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGN 365
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
A AL LF + + P +TFV VL AC+ GLV+ G YF MV Y ++P+ +HY
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT 425
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPM 372
CMVDLL RAG ++EA+ LI +M P ++ TLL AC+VH V++ E KL+QL+
Sbjct: 426 CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQ 485
Query: 373 HDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDC 432
+ YVQLA IYA +WEDV RVRK M E KV G+S +E+ +HHF + D+ H
Sbjct: 486 NAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPE 545
Query: 433 SSDIYRMLETIGQGITAAGY 452
I++ L+ + + + AGY
Sbjct: 546 LDSIHKKLKELEKKMKLAGY 565
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 173/422 (40%), Gaps = 63/422 (14%)
Query: 22 MLRRRRFVKPNQHTFTFALHACTKRAA-SGLGSGVQVHAHVVKLGFARDVFVRNALIHLY 80
++R KP+ F L+ R SG G H ++ A++ N+L+
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMR---AKNTITWNSLLIGI 102
Query: 81 CECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWS 140
+ S + ++F+E + D ++N +L+ VRN A+ FD MP +D SW+
Sbjct: 103 SKDPSRMMEAHQLFDEIPEP---DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWN 159
Query: 141 TMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESL 200
TMI GY + G +E E F M EK NE ECG ++
Sbjct: 160 TMITGYARRGEMEKARELFYSMMEK----NE-----VSWNAMISGYIECGDLEKAS---- 206
Query: 201 KFRITVPVG-----TALVDMYAKCGCIEKSRALFESIS-GKDIWTWNVMICGLASHGLAK 254
F PV TA++ Y K +E + A+F+ ++ K++ TWN MI G + +
Sbjct: 207 HFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPE 266
Query: 255 DALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV--------------- 299
D L LF L EG P + L CS + G++ ++
Sbjct: 267 DGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLI 326
Query: 300 ----------DCYGIQPEMEH-----YGCMVDLLARAGLVDEAVHLIETM---TVEPDPV 341
D + + M+ + M+ A+ G D+A+ L M + PD +
Sbjct: 327 SMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWI 386
Query: 342 LWATLLDACKVHGFVDMGEKIGNKLI---QLDPMHDGHYVQLAGIYAKARKWEDVVRVRK 398
+ +L AC G V++G ++ +++P D HY + + +A K E+ +++ +
Sbjct: 387 TFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD-HYTCMVDLLGRAGKLEEALKLIR 445
Query: 399 LM 400
M
Sbjct: 446 SM 447
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 264 bits (675), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 235/441 (53%), Gaps = 41/441 (9%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ ++ M++ V+P++ T + AC + + LG QVH + GF ++ +
Sbjct: 249 EALELFKDMMKTN--VRPDESTMVTVVSACAQSGSIELGR--QVHLWIDDHGFGSNLKIV 304
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
NALI LY +CG E +T C +F+ +P
Sbjct: 305 NALIDLYSKCG------------ELETACG-----------------------LFERLPY 329
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+DV+SW+T+I GY L ++ L F M G PN+ + GR++
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 194 HSTIESLKFRIT--VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
H I+ +T + T+L+DMYAKCG IE + +F SI K + +WN MI G A HG
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
A + LF + G P ++TFVG+L+ACS G++ G+ F M Y + P++EHY
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDP 371
GCM+DLL +GL EA +I M +EPD V+W +LL ACK+HG V++GE LI+++P
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 569
Query: 372 MHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHD 431
+ G YV L+ IYA A +W +V + R L+ +K KKV G S +E++ +H F+ GDK H
Sbjct: 570 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629
Query: 432 CSSDIYRMLETIGQGITAAGY 452
+ +IY MLE + + AG+
Sbjct: 630 RNREIYGMLEEMEVLLEKAGF 650
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 198/404 (49%), Gaps = 46/404 (11%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
M R HA ++ P S ++ +Y M+ + PN +TF F L +C K A G Q+H H
Sbjct: 105 MFRGHALSSDPVS-ALKLYVCMISLG--LLPNSYTFPFVLKSCAKSKA--FKEGQQIHGH 159
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
V+KLG D++V +LI +Y + G +E +VF++ DVV++ +++ G G
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGR-LEDAHKVFDKSPH---RDVVSYTALIKGYASRGY 215
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
I +A+K+FDE+P +DVVSW+ MI GY + G ++ LE F M + +RP+E
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
E GR VH I+ F + + AL+D+Y+KCG +E + LFE + KD+ +W
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N +I G L K+AL LF + L G P +VT + +L AC+ G + G R+ ++ +D
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG-RWIHVYID 394
Query: 301 --CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT----------------------- 335
G+ ++D+ A+ G ++ A + ++
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 336 -----------VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
++PD + + LL AC G +D+G I + Q
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 108/255 (42%), Gaps = 33/255 (12%)
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
A VF + E +++ W+TM G+ + L+ + M G+ PN
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDM---------------------------- 215
+ G+ +H + L + + V T+L+ M
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 216 ---YAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN 272
YA G IE ++ LF+ I KD+ +WN MI G A G K+AL LF + P
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 273 VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIE 332
T V V++AC+ G + G R +L +D +G ++ ++DL ++ G ++ A L E
Sbjct: 267 STMVTVVSACAQSGSIELG-RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 333 TMTVEPDPVLWATLL 347
+ + D + W TL+
Sbjct: 326 RLPYK-DVISWNTLI 339
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 215/395 (54%), Gaps = 9/395 (2%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
RRR V P+ HTF F AC + L +H ++ G D+F N LI +Y
Sbjct: 107 RRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLI- 165
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIM 144
+ ++S ++F+E DVVT+N ++ G+V+ EI A ++FD MP RD+VSW+++I
Sbjct: 166 APIDSALQLFDENPQ---RDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLIS 222
Query: 145 GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
GY Q + ++ F M G++P+ + G+ +H + + I
Sbjct: 223 GYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFI 282
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL 264
+ T LVD YAKCG I+ + +FE S K ++TWN MI GLA HG + + F K +
Sbjct: 283 DSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMV 342
Query: 265 SEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLV 324
S G P VTF+ VL CS GLV E + F+ M Y + EM+HYGCM DLL RAGL+
Sbjct: 343 SSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLI 402
Query: 325 DEAVHLIETMTVE----PDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQL 380
+EA +IE M + + W+ LL C++HG +++ EK N++ L P G Y +
Sbjct: 403 EEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVM 462
Query: 381 AGIYAKARKWEDVVRVRKLM-IEKVSKKVAGWSLV 414
+YA A +WE+VV+VR+++ +K KK G+S V
Sbjct: 463 VEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 261 bits (667), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 223/447 (49%), Gaps = 39/447 (8%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E++ ++S M +KP+++T L+AC+ L G Q+H+ ++KLGF R
Sbjct: 300 NGESLEAVKLFSRMFSAG--IKPSEYTIVGVLNACSDICY--LEEGKQLHSFLLKLGFER 355
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+F AL+ +Y + G + DA K F
Sbjct: 356 HLFATTALVDMYAKAGC-----------------------------------LADARKGF 380
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
D + ERDV W+++I GYVQN E+ L + M+ GI PN+ E
Sbjct: 381 DCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLE 440
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G+ VH F + VP+G+AL MY+KCG +E +F KD+ +WN MI GL+
Sbjct: 441 LGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLS 500
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
+G +AL LF + L+EG P +VTFV +++ACS G V G YFN+M D G+ P++
Sbjct: 501 HNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKV 560
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
+HY CMVDLL+RAG + EA IE+ ++ LW LL ACK HG ++G G KL+
Sbjct: 561 DHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMA 620
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
L YVQL+GIY + DV RV K M K G S +EL+ H FV GD
Sbjct: 621 LGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDT 680
Query: 429 DHDCSSDIYRMLETIGQGITAAGYPSV 455
H + ++ + + + G+ +V
Sbjct: 681 MHPMIEETKDLVCLVSRQMIEEGFVTV 707
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 178/415 (42%), Gaps = 74/415 (17%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+I +++ LR + + + FT L + GLG Q+H +K G V +
Sbjct: 202 EAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR--QIHCITIKNGLLGFVALS 259
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
NAL+ +Y +C S + +A K+FD +
Sbjct: 260 NALVTMYSKCES-----------------------------------LNEACKMFDSSGD 284
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
R+ ++WS M+ GY QNG + ++ FS M GI+P+E E G+ +
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
HS + L F + TALVDMYAK GC+ +R F+ + +D+ W +I G +
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRY--------FNLMV------ 299
++AL L+ + + G IP + T VL ACS + GK+ F L V
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSAL 464
Query: 300 -----DCYGIQ-----------PEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDP 340
C ++ ++ + M+ L+ G DEA+ L E M +EPD
Sbjct: 465 STMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Query: 341 VLWATLLDACKVHGFVDMGEKIGNKL---IQLDPMHDGHYVQLAGIYAKARKWED 392
V + ++ AC GFV+ G N + I LDP D HY + + ++A + ++
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVD-HYACMVDLLSRAGQLKE 578
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 41/327 (12%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
R + + PN +T A + +S +G Q HA VVK+ D++V +L+ +YC
Sbjct: 110 RAQDILPNAYTLAGIFKAESSLQSSTVGR--QAHALVVKMSSFGDIYVDTSLVGMYC--- 164
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIM 144
+ G + D KVF MPER+ +WSTM+
Sbjct: 165 --------------------------------KAGLVEDGLKVFAYMPERNTYTWSTMVS 192
Query: 145 GYVQNGLLEDGLECFSV-MREKGI-RPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF 202
GY G +E+ ++ F++ +REK ++ GR +H
Sbjct: 193 GYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL 252
Query: 203 RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHK 262
V + ALV MY+KC + ++ +F+S ++ TW+ M+ G + +G + +A+ LF +
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSR 312
Query: 263 FLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAG 322
S G P T VGVLNACS + EGK+ + ++ G + + +VD+ A+AG
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAG 371
Query: 323 LVDEAVHLIETMTVEPDPVLWATLLDA 349
+ +A + + E D LW +L+
Sbjct: 372 CLADARKGFDCLQ-ERDVALWTSLISG 397
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 178/460 (38%), Gaps = 99/460 (21%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
N HT T L +G VH +++ G + + N L++ Y +CG
Sbjct: 11 NPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCG------- 63
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL 151
++ A +F+ + +DVVSW+++I GY QNG
Sbjct: 64 ----------------------------KLAKAHSIFNAIICKDVVSWNSLITGYSQNGG 95
Query: 152 LEDG---LECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
+ ++ F MR + I PN GR H+ + + + V
Sbjct: 96 ISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYV 155
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSE-- 266
T+LV MY K G +E +F + ++ +TW+ M+ G A+ G ++A+ +F+ FL E
Sbjct: 156 DTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKE 215
Query: 267 --------------------------------------GFIPVNVTFVGVLNACSMGGLV 288
GF+ ++ V + + C +
Sbjct: 216 EGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES---L 272
Query: 289 SEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM---TVEPDPVLWAT 345
+E + F+ D I + MV ++ G EAV L M ++P
Sbjct: 273 NEACKMFDSSGDRNSIT-----WSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 346 LLDACKVHGFVDMGEKIGNKLIQLD-PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKV 404
+L+AC +++ G+++ + L++L H L +YAKA D + + E
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE-- 385
Query: 405 SKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIG 444
+ VA W+ + I +V + D++ + +YR ++T G
Sbjct: 386 -RDVALWTSL-----ISGYVQ-NSDNEEALILYRRMKTAG 418
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 146/440 (33%), Positives = 236/440 (53%), Gaps = 40/440 (9%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IR +A + S P ++ ++ ML F P++++FTF L AC A G G Q+H
Sbjct: 111 VIRAYANS-STPEVALTVFREMLLGPVF--PDKYSFTFVLKACA--AFCGFEEGRQIHGL 165
Query: 61 VVKLGFARDVFVRNALIHLYCECG------------------------------SSVESF 90
+K G DVFV N L+++Y G V+
Sbjct: 166 FIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEA 225
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
+ +F+E E+ +V +WN +++G G +++A++VFD MP RDVVSW+ M+ Y G
Sbjct: 226 RALFDEMEE---RNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG 282
Query: 151 LLEDGLECFSVMREKGI-RPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
+ LE F+ M + +P+ G +VH I+ I +
Sbjct: 283 CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLA 342
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
TALVDMY+KCG I+K+ +F + S +D+ TWN +I L+ HGL KDAL +F + + EGF
Sbjct: 343 TALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFK 402
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
P +TF+GVL+AC+ G++ + ++ F +M Y ++P +EHYGCMVDLL R G ++EA
Sbjct: 403 PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEE 462
Query: 330 LIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARK 389
L+ + + +L +LL ACK G ++ E+I N+L++L+ Y Q++ +YA +
Sbjct: 463 LVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGR 522
Query: 390 WEDVVRVRKLM-IEKVSKKV 408
WE V+ R+ M E+V++ +
Sbjct: 523 WEKVIDGRRNMRAERVNRSL 542
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 111/294 (37%), Gaps = 23/294 (7%)
Query: 101 LCSDVVTWNSVLAGVVRNGEIRD---AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLE 157
L D + + ++A N E + A + + + + + +++I Y + E L
Sbjct: 67 LFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALT 126
Query: 158 CFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYA 217
F M + P++ E GR +H V V LV++Y
Sbjct: 127 VFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYG 186
Query: 218 KCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVG 277
+ G E +R + + + +D +WN ++ GL +A ALF + N G
Sbjct: 187 RSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISG 246
Query: 278 VLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM--- 334
A GLV E K F+ M ++ + MV A G +E + + M
Sbjct: 247 YAAA----GLVKEAKEVFDSMP-----VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDD 297
Query: 335 -TVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKA 387
T +PD ++L AC G + GE + + D H +++ G A A
Sbjct: 298 STEKPDGFTLVSVLSACASLGSLSQGEWVHVYI-------DKHGIEIEGFLATA 344
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 253/520 (48%), Gaps = 74/520 (14%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IR +++ N+ +++ +YS M R V P+ TF L AC+ S L G VHA
Sbjct: 90 IIRGYSR-NNHFQDALLMYSNMQLAR--VSPDSFTFPHLLKACS--GLSHLQMGRFVHAQ 144
Query: 61 VVKLGFARDVFVRNALIHL---------------------------------YCECGSSV 87
V +LGF DVFV+N LI L Y + G +
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 88 ESFK-----RVFEEEED-----------TLCSDVVTWNSVLAGVVRNG------------ 119
E+ + R + + D T D+ S+ A VV+ G
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN 264
Query: 120 -------EIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEX 172
++ A+ +FD+M +++ W+ MI GY +NG + ++ F M K +RP+
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 173 XXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESI 232
E R ++ + +R V + +AL+DM+AKCG +E +R +F+
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 233 SGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK 292
+D+ W+ MI G HG A++A++L+ G P +VTF+G+L AC+ G+V EG
Sbjct: 385 LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444
Query: 293 RYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKV 352
+FN M D + I P+ +HY C++DLL RAG +D+A +I+ M V+P +W LL ACK
Sbjct: 445 WFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKK 503
Query: 353 HGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
H V++GE +L +DP + GHYVQL+ +YA AR W+ V VR M EK K G S
Sbjct: 504 HRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCS 563
Query: 413 LVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
VE+ G + F GDK H +I R +E I + G+
Sbjct: 564 WVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGF 603
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 8/260 (3%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
G+I A +VFD++P + W+ +I GY +N +D L +S M+ + P+
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 179 XXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFE--SISGKD 236
+ GRFVH+ + L F V V L+ +YAKC + +R +FE + +
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
I +W ++ A +G +AL +F + P V V VLNA + + +G R +
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG-RSIH 245
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF- 355
V G++ E + + + A+ G V A L + M P+ +LW ++ +G+
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISGYAKNGYA 304
Query: 356 ---VDMGEKIGNKLIQLDPM 372
+DM ++ NK ++ D +
Sbjct: 305 REAIDMFHEMINKDVRPDTI 324
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 224/450 (49%), Gaps = 40/450 (8%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N P E++ I+ ML VKP + ALHAC L G +H V+LG R
Sbjct: 315 NENPKEAMLIFQKMLDEG--VKPTDVSVMGALHACAD--LGDLERGRFIHKLSVELGLDR 370
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+V V N+LI +YC+C E+ A +F
Sbjct: 371 NVSVVNSLISMYCKCK-----------------------------------EVDTAASMF 395
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
++ R +VSW+ MI+G+ QNG D L FS MR + ++P+
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
+++H + V V TALVDMYAKCG I +R +F+ +S + + TWN MI G
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
+HG K AL LF + P VTF+ V++ACS GLV G + F +M + Y I+ M
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
+HYG MVDLL RAG ++EA I M V+P ++ +L AC++H V+ EK +L +
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
L+P G++V LA IY A WE V +VR M+ + +K G S+VE++ +H F +G
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 695
Query: 429 DHDCSSDIYRMLETIGQGITAAGY-PSVHL 457
H S IY LE + I AGY P +L
Sbjct: 696 AHPDSKKIYAFLEKLICHIKEAGYVPDTNL 725
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 143/309 (46%), Gaps = 40/309 (12%)
Query: 25 RRRF--VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCE 82
R R+ V+P + FT+ L C A L G ++H +VK GF+ D+F L ++Y +
Sbjct: 125 RMRYDDVEPVVYNFTYLLKVCGDEAE--LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK 182
Query: 83 CGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTM 142
C ++ +A KVFD MPERD+VSW+T+
Sbjct: 183 CR-----------------------------------QVNEARKVFDRMPERDLVSWNTI 207
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF 202
+ GY QNG+ LE M E+ ++P+ G+ +H F
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF 267
Query: 203 RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHK 262
V + TALVDMYAKCG +E +R LF+ + +++ +WN MI + K+A+ +F K
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQK 327
Query: 263 FLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAG 322
L EG P +V+ +G L+AC+ G + G+ L V+ G+ + ++ + +
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL-GLDRNVSVVNSLISMYCKCK 386
Query: 323 LVDEAVHLI 331
VD A +
Sbjct: 387 EVDTAASMF 395
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 140/342 (40%), Gaps = 48/342 (14%)
Query: 10 SPPSESIAIYSAMLRRRRFVKPN--QHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
+PPS + L R ++ N +H L C S L Q+ V K G
Sbjct: 16 NPPSR----HRHFLSERNYIPANVYEHPAALLLERC-----SSLKELRQILPLVFKNGLY 66
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
++ F + L+ L+C R G + +A +V
Sbjct: 67 QEHFFQTKLVSLFC-----------------------------------RYGSVDEAARV 91
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
F+ + + V + TM+ G+ + L+ L+ F MR + P
Sbjct: 92 FEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAEL 151
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
G+ +H + F + + T L +MYAKC + ++R +F+ + +D+ +WN ++ G
Sbjct: 152 RVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGY 211
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
+ +G+A+ AL + E P +T V VL A S L+S GK + G
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSL 270
Query: 308 MEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
+ +VD+ A+ G ++ A L + M +E + V W +++DA
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDA 311
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 229/443 (51%), Gaps = 41/443 (9%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKR--AASGLGSGVQVHAHVVKLGFARDVF 71
E + +Y M R V+ ++ T+T+ L AC + L G ++HAH+ + G++ V+
Sbjct: 161 EVLGLYWKM--NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVY 218
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
+ L+ +Y G C D ++ VF M
Sbjct: 219 IMTTLVDMYARFG-----------------CVDYASY------------------VFGGM 243
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECF-SVMRE-KGIRPNEXXXXXXXXXXXXXXXXEC 189
P R+VVSWS MI Y +NG + L F +MRE K PN E
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQ 303
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
G+ +H I +PV +ALV MY +CG +E + +F+ + +D+ +WN +I
Sbjct: 304 GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGV 363
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
HG K A+ +F + L+ G P VTFV VL ACS GLV EGKR F M +GI+P++E
Sbjct: 364 HGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIE 423
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
HY CMVDLL RA +DEA +++ M EP P +W +LL +C++HG V++ E+ +L L
Sbjct: 424 HYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFAL 483
Query: 370 DPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKD 429
+P + G+YV LA IYA+A+ W++V RV+KL+ + +K+ G +E+ ++ FV+ D+
Sbjct: 484 EPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEF 543
Query: 430 HDCSSDIYRMLETIGQGITAAGY 452
+ I+ L + + + GY
Sbjct: 544 NPLMEQIHAFLVKLAEDMKEKGY 566
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 143/348 (41%), Gaps = 58/348 (16%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
P+Q T+ + C R S L ++VH H++ G +D F+ LI +Y + GS
Sbjct: 75 PSQQTYELLILCCGHR--SSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGS----- 127
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
+ A KVFD+ +R + W+ + G
Sbjct: 128 ------------------------------VDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 151 LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC-------GRFVHSTIESLKFR 203
E+ L + M G+ E EC G+ +H+ + +
Sbjct: 158 HGEEVLGLYWKMNRIGV---ESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS 214
Query: 204 ITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKF 263
V + T LVDMYA+ GC++ + +F + +++ +W+ MI A +G A +AL F +
Sbjct: 215 SHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 264 LSE--GFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARA 321
+ E P +VT V VL AC+ + +GK ++ G+ + +V + R
Sbjct: 275 MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR-RGLDSILPVISALVTMYGRC 333
Query: 322 GLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
G ++ + + M + D V W +L+ + VHG+ G K IQ+
Sbjct: 334 GKLEVGQRVFDRMH-DRDVVSWNSLISSYGVHGY-------GKKAIQI 373
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 12/175 (6%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI C+AK N E++ + M+R + PN T L AC AA L G +H +
Sbjct: 254 MIACYAK-NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA--LEQGKLIHGY 310
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+++ G + V +AL+ +Y CG +E +RVF+ D DVV+WNS+++ +G
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCG-KLEVGQRVFDRMHD---RDVVSWNSLISSYGVHGY 366
Query: 121 IRDAEKVFDEM----PERDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPN 170
+ A ++F+EM V++ +++ GL+E+G F M R+ GI+P
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQ 421
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 237/450 (52%), Gaps = 42/450 (9%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
SE++ +++ M+R KPN+ TF L +C + ASGLG G Q+H +VK + +FV
Sbjct: 135 SEALTVFAEMMRSDG--KPNEFTFATVLTSCIR--ASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
++L+ +Y + G +I++A ++F+ +P
Sbjct: 191 GSSLLDMYAKAG-----------------------------------QIKEAREIFECLP 215
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
ERDVVS + +I GY Q GL E+ LE F + +G+ PN + G+
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
H + + + +L+DMY+KCG + +R LF+++ + +WN M+ G + HGL
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 253 AKDALALFHKFLSEGFI-PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC-YGIQPEMEH 310
++ L LF E + P VT + VL+ CS G + G F+ MV YG +P EH
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 311 YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLD 370
YGC+VD+L RAG +DEA I+ M +P + +LL AC+VH VD+GE +G +LI+++
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIE 455
Query: 371 PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDH 430
P + G+YV L+ +YA A +W DV VR +M++K K G S ++ E +H+F A D+ H
Sbjct: 456 PENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTH 515
Query: 431 DCSSDIYRMLETIGQGITAAGYPSVHLTCV 460
++ ++ I + AGY L+CV
Sbjct: 516 PRREEVLAKMKEISIKMKQAGYVP-DLSCV 544
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 146/326 (44%), Gaps = 47/326 (14%)
Query: 34 HTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRV 93
H + L+AC + A L G +VHAH++K + ++R L+ Y +C
Sbjct: 53 HGYDALLNACLDKRA--LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC-------- 102
Query: 94 FEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLE 153
+ DA KV DEMPE++VVSW+ MI Y Q G
Sbjct: 103 ---------------------------LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSS 135
Query: 154 DGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALV 213
+ L F+ M +PNE G+ +H I + + VG++L+
Sbjct: 136 EALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLL 195
Query: 214 DMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNV 273
DMYAK G I+++R +FE + +D+ + +I G A GL ++AL +FH+ SEG P V
Sbjct: 196 DMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYV 255
Query: 274 TFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG----CMVDLLARAGLVDEAVH 329
T+ +L A S L+ GK+ C+ ++ E+ Y ++D+ ++ G + A
Sbjct: 256 TYASLLTALSGLALLDHGKQ-----AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 330 LIETMTVEPDPVLWATLLDACKVHGF 355
L + M E + W +L HG
Sbjct: 311 LFDNMP-ERTAISWNAMLVGYSKHGL 335
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 258 bits (659), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 231/456 (50%), Gaps = 43/456 (9%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MIR + + +P E ++ + LRR + N + +FAL C K + L G+Q+H
Sbjct: 83 MIRAFSLSQTP-CEGFRLFRS-LRRNSSLPANPLSSSFALKCCIK--SGDLLGGLQIHGK 138
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+ GF D + L+ LY C +S
Sbjct: 139 IFSDGFLSDSLLMTTLMDLYSTCENST--------------------------------- 165
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR---EKGIRPNEXXXXXX 177
DA KVFDE+P+RD VSW+ + Y++N D L F M+ + ++P+
Sbjct: 166 --DACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLA 223
Query: 178 XXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI 237
+ G+ VH I+ + + LV MY++CG ++K+ +F + +++
Sbjct: 224 LQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNV 283
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL 297
+W +I GLA +G K+A+ F++ L G P T G+L+ACS GLV+EG +F+
Sbjct: 284 VSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDR 343
Query: 298 MVDC-YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFV 356
M + I+P + HYGC+VDLL RA L+D+A LI++M ++PD +W TLL AC+VHG V
Sbjct: 344 MRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDV 403
Query: 357 DMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVEL 416
++GE++ + LI+L G YV L Y+ KWE V +R LM EK G S +EL
Sbjct: 404 ELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIEL 463
Query: 417 EGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
+G +H F+ D H +IY+ML I Q + AGY
Sbjct: 464 QGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGY 499
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 221/416 (53%), Gaps = 36/416 (8%)
Query: 40 LHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEED 99
+ AC++ A GL +H+ V+K GF R V V N L+ Y + G
Sbjct: 190 ISACSRVPAKGLTE--SIHSFVIKRGFDRGVSVGNTLLDAYAKGG--------------- 232
Query: 100 TLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF 159
G + A K+FD++ ++D VS+++++ Y Q+G+ + E F
Sbjct: 233 ------------------EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 160 S-VMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAK 218
+++ K + N G+ +H + + V VGT+++DMY K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 219 CGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGV 278
CG +E +R F+ + K++ +W MI G HG A AL LF + G P +TFV V
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 279 LNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEP 338
L ACS GL EG R+FN M +G++P +EHYGCMVDLL RAG + +A LI+ M ++P
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454
Query: 339 DPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRK 398
D ++W++LL AC++H V++ E +L +LD + G+Y+ L+ IYA A +W+DV RVR
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514
Query: 399 LMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGYPS 454
+M + K G+SL+EL G +H F+ GD++H IY L + + + AGY S
Sbjct: 515 IMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 155/354 (43%), Gaps = 56/354 (15%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
+E++ +S+M R+ + P + +F A+ AC+ + + SG Q H G+ D+FV
Sbjct: 58 AEALLAFSSM--RKLSLYPTRSSFPCAIKACS--SLFDIFSGKQTHQQAFVFGYQSDIFV 113
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+ALI +Y CG ++ DA KVFDE+P
Sbjct: 114 SSALIVMYSTCG-----------------------------------KLEDARKVFDEIP 138
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXX-XXXXXXECGR 191
+R++VSW++MI GY NG + L+ S+ ++ + N+ C R
Sbjct: 139 KRNIVSWTSMIRGYDLNG---NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 192 F--------VHSTIESLKFRITVPVGTALVDMYAKC--GCIEKSRALFESISGKDIWTWN 241
+HS + F V VG L+D YAK G + +R +F+ I KD ++N
Sbjct: 196 VPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 255
Query: 242 VMICGLASHGLAKDALALFHKFLSEGFIPVN-VTFVGVLNACSMGGLVSEGKRYFNLMVD 300
++ A G++ +A +F + + + N +T VL A S G + GK + ++
Sbjct: 256 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR 315
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
G++ ++ ++D+ + G V+ A + M + W ++ +HG
Sbjct: 316 -MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHG 367
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 149/350 (42%), Gaps = 49/350 (14%)
Query: 117 RNGEIRDAEKVFDEMPER-DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXX 175
R+ E ++ +F+ ++ DV SW+++I ++G + L FS MR+ + P
Sbjct: 21 RHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFP 80
Query: 176 XXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK 235
G+ H ++ + V +AL+ MY+ CG +E +R +F+ I +
Sbjct: 81 CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR 140
Query: 236 DIWTWNVMICGLASHGLAKDALALFHKFL------SEGFIPVNVTFVGVLNACS---MGG 286
+I +W MI G +G A DA++LF L + ++ V V++ACS G
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 287 LVSE-----GKRYF-------NLMVDCYG-----------------IQPEMEHYGCMVDL 317
L KR F N ++D Y + + Y ++ +
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 318 LARAGLVDEAV----HLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMH 373
A++G+ +EA L++ V + + +T+L A G + +G+ I +++I++ +
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLE 319
Query: 374 DGHYV--QLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIH 421
D V + +Y K + E RK +K V W+ + G+H
Sbjct: 320 DDVIVGTSIIDMYCKCGRVET---ARKAFDRMKNKNVRSWTAMIAGYGMH 366
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 38/148 (25%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGS---GVQVHAHVVKLGFARDVFVRNALIHLYCE 82
RR VK TF + A S G+ G +H V+++G DV V ++I +YC+
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 83 CGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTM 142
CG VE+ ++ F D M ++V SW+ M
Sbjct: 335 CG-RVETARKAF----------------------------------DRMKNKNVRSWTAM 359
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIRPN 170
I GY +G LE F M + G+RPN
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPN 387
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 218/436 (50%), Gaps = 37/436 (8%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E A+ + + R V PN+ TF AC + S L G Q+H +V+ LG + V
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACA--SLSRLVWGEQLHCNVLSLGLNDSLSVS 348
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N+++ +Y CG+ V A +F M
Sbjct: 349 NSMMKMYSTCGNLV-----------------------------------SASVLFQGMRC 373
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
RD++SWST+I GY Q G E+G + FS MR+ G +P + E GR V
Sbjct: 374 RDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV 433
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H+ V ++L++MY+KCG I+++ +F DI + MI G A HG +
Sbjct: 434 HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKS 493
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
K+A+ LF K L GF P +VTF+ VL AC+ G + G YFN+M + Y ++P EHYGC
Sbjct: 494 KEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC 553
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMH 373
MVDLL RAG + +A +I M+ + D V+W TLL ACK G ++ G + ++++LDP
Sbjct: 554 MVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTC 613
Query: 374 DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCS 433
V LA IY+ E+ VRK M K K GWS ++++ + FV+GD+ H S
Sbjct: 614 ATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQS 673
Query: 434 SDIYRMLETIGQGITA 449
DIY +LE G A
Sbjct: 674 EDIYNILELAVSGAEA 689
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 168/430 (39%), Gaps = 80/430 (18%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E + +S M R + +TF AL AC + G +H HV+ GF + V
Sbjct: 192 EGLTYFSEMSRSEEL--SDTYTFAIALKACA--GLRQVKYGKAIHTHVIVRGFVTTLCVA 247
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N+L +Y ECG E +D LC +F+ M E
Sbjct: 248 NSLATMYTECG-----------EMQDGLC------------------------LFENMSE 272
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
RDVVSW+++I+ Y + G +E F MR + PNE G +
Sbjct: 273 RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQL 332
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H + SL ++ V +++ MY+ CG + + LF+ + +DI +W+ +I G G
Sbjct: 333 HCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFG 392
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
++ F G P + +L+ S V EG R + + C+G++
Sbjct: 393 EEGFKYFSWMRQSGTKPTDFALASLLSV-SGNMAVIEGGRQVHALALCFGLEQNSTVRSS 451
Query: 314 MVDLLARAGLVDEAVHL--------IETMTV--------------------------EPD 339
++++ ++ G + EA + I ++T PD
Sbjct: 452 LINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPD 511
Query: 340 PVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG--HYVQLAGIYAKARKWEDVVRVR 397
V + ++L AC G +D+G N + + M HY + + +A + D +
Sbjct: 512 SVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEK-- 569
Query: 398 KLMIEKVSKK 407
MI ++S K
Sbjct: 570 --MINEMSWK 577
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 154/362 (42%), Gaps = 42/362 (11%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I+ + AN+ E++ ++SAM V P+ + L AC + +S + G +HA+
Sbjct: 77 IIKRYVTANNS-DEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ--SSNIAYGESLHAY 133
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
VK V+V ++L+ +Y KRV G+
Sbjct: 134 AVKTSLLSSVYVGSSLLDMY----------KRV-------------------------GK 158
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
I + +VF EMP R+ V+W+ +I G V G ++GL FS M +
Sbjct: 159 IDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKA 218
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
+ G+ +H+ + F T+ V +L MY +CG ++ LFE++S +D+ +W
Sbjct: 219 CAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSW 278
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC-SMGGLVSEGKRYFNLMV 299
+I G A+ F K + P TF + +AC S+ LV + + N++
Sbjct: 279 TSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL- 337
Query: 300 DCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMG 359
G+ + M+ + + G + A L + M D + W+T++ GF + G
Sbjct: 338 -SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGGYCQAGFGEEG 395
Query: 360 EK 361
K
Sbjct: 396 FK 397
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 7/277 (2%)
Query: 83 CGSSVESFKRVFEEEEDTLCSDVVTW---NSVLAGVVRNGEIRDAEKVFDEMPERDVVSW 139
C +S+ ++ EE + + V+ NS L ++ G +R A +VFD+MP D+VSW
Sbjct: 15 CTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSW 74
Query: 140 STMIMGYVQNGLLEDGLECFSVMR--EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTI 197
+++I YV ++ L FS MR + + P+ G +H+
Sbjct: 75 TSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYA 134
Query: 198 ESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDAL 257
+V VG++L+DMY + G I+KS +F + ++ TW +I GL G K+ L
Sbjct: 135 VKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGL 194
Query: 258 ALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDL 317
F + + TF L AC+ V GK + V G + + +
Sbjct: 195 TYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA-IHTHVIVRGFVTTLCVANSLATM 253
Query: 318 LARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
G + + + L E M+ E D V W +L+ A K G
Sbjct: 254 YTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIG 289
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 233/423 (55%), Gaps = 11/423 (2%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
N ++I ++ M + +K ++ T L AC+ A L G +++ VV F
Sbjct: 124 GNGRFEDAIGVFKRMSQESN-LKFDEGTIVSTLSACS--ALKNLEIGERIYRFVVT-EFE 179
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
V + NAL+ ++C+CG ++ + VF+ D +V W S++ G V G I +A +
Sbjct: 180 MSVRIGNALVDMFCKCGC-LDKARAVFDSMRD---KNVKCWTSMVFGYVSTGRIDEARVL 235
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
F+ P +DVV W+ M+ GYVQ ++ LE F M+ GIRP+
Sbjct: 236 FERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGAL 295
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
E G+++H I + + VGTALVDMYAKCGCIE + +F I +D +W +I GL
Sbjct: 296 EQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGL 355
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
A +G++ AL L+++ + G +TFV VL AC+ GG V+EG++ F+ M + + +QP+
Sbjct: 356 AMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPK 415
Query: 308 MEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL---WATLLDACKVHGFVDMGEKIGN 364
EH C++DLL RAGL+DEA LI+ M E D L + +LL A + +G V + E++
Sbjct: 416 SEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAE 475
Query: 365 KLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFV 424
KL +++ + LA +YA A +WEDV VR+ M + +K G S +E++G H F+
Sbjct: 476 KLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFI 535
Query: 425 AGD 427
GD
Sbjct: 536 VGD 538
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 156/391 (39%), Gaps = 107/391 (27%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G +VH + VK G D +V N+L+ +Y G
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLG----------------------------- 95
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEX 172
+I KVFDEMP+RDVVSW+ +I YV NG ED + F M +E ++ +E
Sbjct: 96 ------KIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEG 149
Query: 173 XXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESI 232
E G ++ + + +F ++V +G ALVDM+ KCGC++K+RA+F+S+
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 233 SGKDIWTWNVMICGLASHGLAKDALALFHK------------------------------ 262
K++ W M+ G S G +A LF +
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 263 -FLSEGFIPVNVTFVGVLNACSMGGLVSEGK---RYFN------------LMVDCYG--- 303
+ G P N V +L C+ G + +GK Y N +VD Y
Sbjct: 269 CMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCG 328
Query: 304 -IQPEME-----------HYGCMVDLLARAGLVDEAVHL---IETMTVEPDPVLWATLLD 348
I+ +E + ++ LA G+ A+ L +E + V D + + +L
Sbjct: 329 CIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLT 388
Query: 349 ACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQ 379
AC GFV G KI M + H VQ
Sbjct: 389 ACNHGGFVAEGRKI------FHSMTERHNVQ 413
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 9/205 (4%)
Query: 156 LECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDM 215
L F +R +G+ P+ G VH V +L+ M
Sbjct: 31 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM 90
Query: 216 YAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNV-T 274
YA G IE + +F+ + +D+ +WN +I +G +DA+ +F + E + + T
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 275 FVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
V L+ACS + G+R + +V + + + + +VD+ + G +D+A + ++M
Sbjct: 151 IVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARAVFDSM 208
Query: 335 TVEPDPVLWATLLDACKVHGFVDMG 359
+ + W ++ V G+V G
Sbjct: 209 R-DKNVKCWTSM-----VFGYVSTG 227
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 223/428 (52%), Gaps = 38/428 (8%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+ P+ +T T L+ C + L G +VH + + D+FV NAL+ +Y +C
Sbjct: 393 ISPDVYTVTAVLNCCARYRL--LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC----- 445
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
G +++AE VF EM +D++SW+T+I GY +
Sbjct: 446 ------------------------------GSMQEAELVFSEMRVKDIISWNTIIGGYSK 475
Query: 149 NGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
N + L F+++ EK P+E + GR +H I +
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
V +LVDMYAKCG + + LF+ I+ KD+ +W VMI G HG K+A+ALF++ G
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
++FV +L ACS GLV EG R+FN+M I+P +EHY C+VD+LAR G + +A
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655
Query: 328 VHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKA 387
IE M + PD +W LL C++H V + EK+ K+ +L+P + G+YV +A IYA+A
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 715
Query: 388 RKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGI 447
KWE V R+RK + ++ +K G S +E++G ++ FVAGD + + +I L + +
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Query: 448 TAAGYPSV 455
GY +
Sbjct: 776 IEEGYSPL 783
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 182/449 (40%), Gaps = 83/449 (18%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGS---GVQVHAHVVKLGFARD 69
S SI ++ M+ V+ + +TF+ C ++ S L S G Q+H ++K GF
Sbjct: 177 SGSIGLFKKMMSSG--VEMDSYTFS-----CVSKSFSSLRSVHGGEQLHGFILKSGFGER 229
Query: 70 VFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFD 129
V N+L+ Y ++N + A KVFD
Sbjct: 230 NSVGNSLVAFY-----------------------------------LKNQRVDSARKVFD 254
Query: 130 EMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
EM ERDV+SW+++I GYV NGL E GL F M GI +
Sbjct: 255 EMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL 314
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
GR VHS F L+DMY+KCG ++ ++A+F +S + + ++ MI G A
Sbjct: 315 GRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF-------------- 295
GLA +A+ LF + EG P T VLN C+ L+ EGKR
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 296 -NLMVDCYGIQPEMEH---------------YGCMVDLLARAGLVDEAVH----LIETMT 335
N ++D Y M+ + ++ ++ +EA+ L+E
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 336 VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQ-LAGIYAKARKWEDVV 394
PD A +L AC D G +I +++ D H L +YAK ++
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA---LL 551
Query: 395 RVRKLMIEKVSKKVAGWSLVELEGGIHHF 423
L + SK + W+++ G+H F
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGF 580
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 33/277 (11%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
G++++A +VFDE+ + W+ ++ ++G + F M G+ +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 179 XXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIW 238
G +H I F VG +LV Y K ++ +R +F+ ++ +D+
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 239 TWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK------ 292
+WN +I G S+GLA+ L++F + L G T V V C+ L+S G+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 293 ---------RYFNLMVDCYGIQPEME---------------HYGCMVDLLARAGLVDEAV 328
R+ N ++D Y +++ Y M+ AR GL EAV
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 329 HLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKI 362
L E M + PD +L+ C + +D G+++
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 419
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 4/227 (1%)
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+R V +T + + ++G LE+ ++ V + I P G+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKD--GKE 115
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
V + I F I +G+ L MY CG ++++ +F+ + + WN+++ LA G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
++ LF K +S G + TF V + S V G++ ++ G
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS-GFGERNSVGN 234
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMG 359
+V + VD A + + MT E D + W ++++ +G + G
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAEKG 280
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 228/446 (51%), Gaps = 41/446 (9%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N P ES+ +Y M R V+P++ T+ F + A ++ G +HAHVVK GF
Sbjct: 87 NQLPFESLLLYKKM--RDLGVRPDEFTYPFVVKAISQ--LGDFSCGFALHAHVVKYGFGC 142
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
V L+ +Y ++ GE+ AE +F
Sbjct: 143 LGIVATELVMMY-----------------------------------MKFGELSSAEFLF 167
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+ M +D+V+W+ + VQ G LE F+ M ++ + E
Sbjct: 168 ESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLE 227
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G ++ + + V A +DM+ KCG E +R LFE + +++ +W+ MI G A
Sbjct: 228 IGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYA 287
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC--YGIQP 306
+G +++AL LF +EG P VTF+GVL+ACS GLV+EGKRYF+LMV ++P
Sbjct: 288 MNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEP 347
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKL 366
EHY CMVDLL R+GL++EA I+ M VEPD +W LL AC VH + +G+K+ + L
Sbjct: 348 RKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVL 407
Query: 367 IQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAG 426
++ P ++V L+ IYA A KW+ V +VR M + +KKVA +S VE EG IH F G
Sbjct: 408 VETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRG 467
Query: 427 DKDHDCSSDIYRMLETIGQGITAAGY 452
DK H S IY L+ I + I GY
Sbjct: 468 DKSHPQSKAIYEKLDEILKKIRKMGY 493
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 146/337 (43%), Gaps = 44/337 (13%)
Query: 109 NSVLAGVVRN----GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
NS+L ++ N G++ A +VFDEM + + W+T+ GYV+N L + L + MR+
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRD 102
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEK 224
G+RP+E CG +H+ + F V T LV MY K G +
Sbjct: 103 LGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSS 162
Query: 225 SRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSM 284
+ LFES+ KD+ WN + G + AL F+K ++ + T V +L+AC
Sbjct: 163 AEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQ 222
Query: 285 GGLVSEGKRYFNLM----VDCYGI--------------------------QPEMEHYGCM 314
G + G+ ++ +DC I Q + + M
Sbjct: 223 LGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTM 282
Query: 315 VDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDACKVHGFVDMGEKIGNKLIQ--- 368
+ A G EA+ L TM E P+ V + +L AC G V+ G++ + ++Q
Sbjct: 283 IVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSND 342
Query: 369 --LDPMHDGHYVQLAGIYAKARKWEDVVR-VRKLMIE 402
L+P + HY + + ++ E+ ++K+ +E
Sbjct: 343 KNLEPRKE-HYACMVDLLGRSGLLEEAYEFIKKMPVE 378
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 242/500 (48%), Gaps = 74/500 (14%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGF------ 66
SESI++Y +MLR P+ +F F L +C + S SG Q+H HV K G
Sbjct: 35 SESISLYRSMLRSGS--SPDAFSFPFILKSCA--SLSLPVSGQQLHCHVTKGGCETEPFV 90
Query: 67 ----------------ARDVF-----------VRNALIHLYCECGSSVESFKRVFEEEED 99
AR VF NALI Y S V +F ++
Sbjct: 91 LTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGY-TANSKVTDAAYMFRRMKE 149
Query: 100 T--------------LC----------------------SDVVTWNSVLAGVVRNGEIRD 123
T LC S+V NS + ++ G +
Sbjct: 150 TGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEA 209
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
++FDEMP + +++W+ +I GY QNGL D LE + M+ G+ P+
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVM 243
+ G V +ES F V V A + MYA+CG + K+RA+F+ + K + +W M
Sbjct: 270 LGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG 303
I HG+ + L LF + G P FV VL+ACS GL +G F M Y
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 389
Query: 304 IQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIG 363
++P EHY C+VDLL RAG +DEA+ IE+M VEPD +W LL ACK+H VDM E
Sbjct: 390 LEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449
Query: 364 NKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHF 423
K+I+ +P + G+YV ++ IY+ ++ E + R+R +M E+ +K G+S VE +G +H F
Sbjct: 450 AKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLF 509
Query: 424 VAGDKDHDCSSDIYRMLETI 443
+AGD+ H+ + +++RML+ +
Sbjct: 510 LAGDRSHEQTEEVHRMLDEL 529
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 117/305 (38%), Gaps = 44/305 (14%)
Query: 139 WSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIE 198
W+ + L + + + M G P+ G+ +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 199 SLKFRITVPVGTALVDMYAKCGCIEKSRALFES--ISGKDIWTWNVMICGLASHGLAKDA 256
V TAL+ MY KCG + +R +FE S + +N +I G ++ DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 257 LALFHKFLSEGFIPVNVTFVGVLNACSM----------------GGLVSEG---KRYFNL 297
+F + G +VT +G++ C++ GGL SE + +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 298 MVDCYGIQP------EMEHYG-----CMVDLLARAGLVDEAVHLIETMT---VEPDPVLW 343
+ C ++ EM G ++ ++ GL + + L E M V PDP
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 344 ATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGI--------YAKARKWEDVVR 395
++L +C G +G ++G KL++ + +V A I AKAR D++
Sbjct: 261 VSVLSSCAHLGAKKIGHEVG-KLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 396 VRKLM 400
V+ L+
Sbjct: 320 VKSLV 324
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 230/440 (52%), Gaps = 40/440 (9%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ Y+ M++R +P+ T+ L ACT+ + + G Q+H V KLG DVFV+
Sbjct: 115 EALCFYNEMMQRGN--EPDNFTYPCLLKACTRLKS--IREGKQIHGQVFKLGLEADVFVQ 170
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N+LI++Y C GE+ + VF+++
Sbjct: 171 NSLINMYGRC-----------------------------------GEMELSSAVFEKLES 195
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+ SWS+M+ G+ + L F M E ++ E G
Sbjct: 196 KTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMS 255
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
+H + + + V T+LVDMY KCGC++K+ +F+ + ++ T++ MI GLA HG
Sbjct: 256 IHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGE 315
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
+ AL +F K + EG P +V +V VLNACS GLV EG+R F M+ ++P EHYG
Sbjct: 316 GESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG 375
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPM 372
C+VDLL RAGL++EA+ I+++ +E + V+W T L C+V +++G+ +L++L
Sbjct: 376 CLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSH 435
Query: 373 HDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDC 432
+ G Y+ ++ +Y++ + W+DV R R + K K+ G+S+VEL+G H FV+ D+ H
Sbjct: 436 NPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPK 495
Query: 433 SSDIYRMLETIGQGITAAGY 452
+IY+ML + + GY
Sbjct: 496 CKEIYKMLHQMEWQLKFEGY 515
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 135/319 (42%), Gaps = 41/319 (12%)
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
A +F + + ++TMI GYV E+ L ++ M ++G P+
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVM 243
G+ +H + L V V +L++MY +CG +E S A+FE + K +W+ M
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVT-FVGVLNACSMGGLVSEGKRYFNLMVDCY 302
+ A G+ + L LF SE + + V L AC+ G ++ G ++
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT--------------------------- 335
+ + +VD+ + G +D+A+H+ + M
Sbjct: 265 S-ELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 336 -------VEPDPVLWATLLDACKVHGFVDMGEKIGNKLI---QLDPMHDGHYVQLAGIYA 385
+EPD V++ ++L+AC G V G ++ +++ +++P + HY L +
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAE-HYGCLVDLLG 382
Query: 386 KARKWEDVVR-VRKLMIEK 403
+A E+ + ++ + IEK
Sbjct: 383 RAGLLEEALETIQSIPIEK 401
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 215/431 (49%), Gaps = 42/431 (9%)
Query: 22 MLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYC 81
+L R V+PN +T++ L +C +G+ +H ++K G DVFVR+ALI ++
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSC-----NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFA 205
Query: 82 ECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWST 141
+ G E DA VFDEM D + W++
Sbjct: 206 KLG-----------------------------------EPEDALSVFDEMVTGDAIVWNS 230
Query: 142 MIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLK 201
+I G+ QN + LE F M+ G + E G H I +K
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI--VK 288
Query: 202 FRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFH 261
+ + + ALVDMY KCG +E + +F + +D+ TW+ MI GLA +G +++AL LF
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 262 KFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARA 321
+ S G P +T VGVL ACS GL+ +G YF M YGI P EHYGCM+DLL +A
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 322 GLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLA 381
G +D+AV L+ M EPD V W TLL AC+V + + E K+I LDP G Y L+
Sbjct: 409 GKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLS 468
Query: 382 GIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLE 441
IYA ++KW+ V +R M ++ KK G S +E+ IH F+ GD H ++ + L
Sbjct: 469 NIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLN 528
Query: 442 TIGQGITAAGY 452
+ +T GY
Sbjct: 529 QLIHRLTGIGY 539
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 140/322 (43%), Gaps = 38/322 (11%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
N ++ V+ + DA ++FD+MP+R+V+SW+TMI Y + + + LE +M +R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
PN R +H I V V +AL+D++AK G E + ++
Sbjct: 160 PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 229 FESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLV 288
F+ + D WN +I G A + + AL LF + GFI T VL AC+ L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 289 SEGKRYF-------------NLMVDCYGIQPEMEH---------------YGCMVDLLAR 320
G + N +VD Y +E + M+ LA+
Sbjct: 277 ELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 321 AGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGE---KIGNKLIQLDPMHD 374
G EA+ L E M +P+ + +L AC G ++ G + KL +DP+ +
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 375 GHYVQLAGIYAKARKWEDVVRV 396
HY + + KA K +D V++
Sbjct: 397 -HYGCMIDLLGKAGKLDDAVKL 417
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 15/166 (9%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
NS ++ ++ M +R F+ Q T T L ACT A LG +Q H H+VK + +
Sbjct: 238 NSRSDVALELFKRM-KRAGFI-AEQATLTSVLRACTGLALLELG--MQAHVHIVK--YDQ 291
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D+ + NAL+ +YC+CG S+E RVF + ++ DV+TW+++++G+ +NG ++A K+F
Sbjct: 292 DLILNNALVDMYCKCG-SLEDALRVFNQMKE---RDVITWSTMISGLAQNGYSQEALKLF 347
Query: 129 DEMPERDVVSWSTMIMGYV----QNGLLEDGLECFSVMRE-KGIRP 169
+ M I+G + GLLEDG F M++ GI P
Sbjct: 348 ERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 226/439 (51%), Gaps = 39/439 (8%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+I ++ M+ VKP+ + L AC L SG + ++ ++ ++ FVR
Sbjct: 195 EAIDLFKKMVEMG--VKPDSYFIVQVLSACVH--VGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
L++LY +CG ++ A VFD M E
Sbjct: 251 TTLVNLYAKCG-----------------------------------KMEKARSVFDSMVE 275
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+D+V+WSTMI GY N ++G+E F M ++ ++P++ + G +
Sbjct: 276 KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWG 335
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
S I+ +F + + AL+DMYAKCG + + +F+ + KDI N I GLA +G
Sbjct: 336 ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
K + A+F + G P TF+G+L C GL+ +G R+FN + Y ++ +EHYGC
Sbjct: 396 KLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGC 455
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMH 373
MVDL RAG++D+A LI M + P+ ++W LL C++ + E + +LI L+P +
Sbjct: 456 MVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWN 515
Query: 374 DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCS 433
G+YVQL+ IY+ +W++ VR +M +K KK+ G+S +ELEG +H F+A DK H S
Sbjct: 516 AGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLS 575
Query: 434 SDIYRMLETIGQGITAAGY 452
IY LE +G + G+
Sbjct: 576 DKIYAKLEDLGNEMRLMGF 594
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 159/341 (46%), Gaps = 39/341 (11%)
Query: 35 TFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVF 94
TF L ACT+ ++ LG + +H+ VVK GF DV +L+ +Y GS
Sbjct: 113 TFPLVLKACTRASSRKLG--IDLHSLVVKCGFNHDVAAMTSLLSIYS--GS--------- 159
Query: 95 EEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLED 154
G + DA K+FDE+P+R VV+W+ + GY +G +
Sbjct: 160 ------------------------GRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHRE 195
Query: 155 GLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVD 214
++ F M E G++P+ + G ++ +E ++ + V T LV+
Sbjct: 196 AIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVN 255
Query: 215 MYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVT 274
+YAKCG +EK+R++F+S+ KDI TW+ MI G AS+ K+ + LF + L E P +
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315
Query: 275 FVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
VG L++C+ G + G+ +L +D + + ++D+ A+ G + + + M
Sbjct: 316 IVGFLSSCASLGALDLGEWGISL-IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 335 TVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG 375
E D V+ + +G V + + + +L DG
Sbjct: 375 K-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 112/242 (46%), Gaps = 2/242 (0%)
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
+F ++ ++++I G+V N L + L+ F +R+ G+ +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 187 XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICG 246
+ G +HS + F V T+L+ +Y+ G + + LF+ I + + TW + G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
+ G ++A+ LF K + G P + V VL+AC G + G+ M + +Q
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE-MEMQK 245
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKL 366
+V+L A+ G +++A + ++M VE D V W+T++ + F G ++ ++
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 367 IQ 368
+Q
Sbjct: 305 LQ 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 92/167 (55%), Gaps = 15/167 (8%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGS-GVQVHA 59
MI+ +A +NS P E I ++ ML+ +KP+Q + L +C A LG G+ +
Sbjct: 284 MIQGYA-SNSFPKEGIELFLQMLQEN--LKPDQFSIVGFLSSCASLGALDLGEWGISL-- 338
Query: 60 HVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNG 119
+ + F ++F+ NALI +Y +CG+ F+ VF+E ++ D+V N+ ++G+ +NG
Sbjct: 339 -IDRHEFLTNLFMANALIDMYAKCGAMARGFE-VFKEMKE---KDIVIMNAAISGLAKNG 393
Query: 120 EIRDAEKVFDEMPE----RDVVSWSTMIMGYVQNGLLEDGLECFSVM 162
++ + VF + + D ++ ++ G V GL++DGL F+ +
Sbjct: 394 HVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/426 (34%), Positives = 219/426 (51%), Gaps = 9/426 (2%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
RR +K N+ +F L AC K + L Q H V+ GF +V + ++I Y +CG
Sbjct: 171 RRSGIKFNEFSFAGLLTACVK--SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIM 144
+ES KR F+E D+ W ++++G + G++ AEK+F EMPE++ VSW+ +I
Sbjct: 229 Q-MESAKRCFDE---MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIA 284
Query: 145 GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
GYV+ G L+ F M G++P + G+ +H + R
Sbjct: 285 GYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP 344
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGK-DIWTWNVMICGLASHGLAKDALALFHKF 263
V ++L+DMY+K G +E S +F K D WN MI LA HGL AL +
Sbjct: 345 NAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 264 LSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGL 323
+ P T V +LNACS GLV EG R+F M +GI P+ EHY C++DLL RAG
Sbjct: 405 IKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 324 VDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGI 383
E + IE M EPD +W +L C++HG ++G+K ++LI+LDP Y+ L+ I
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSI 524
Query: 384 YAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCS--SDIYRMLE 441
YA KWE V ++R +M ++ K S +E+E + F D H + +IY +L
Sbjct: 525 YADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILH 584
Query: 442 TIGQGI 447
+ I
Sbjct: 585 NLAAVI 590
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 159/352 (45%), Gaps = 37/352 (10%)
Query: 50 GLGSGVQVHAHVVKLGFAR-DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTW 108
L G +H H+ GF R + + N LI +Y +CG +++ K VF++ ++ +W
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACK-VFDQMH---LRNLYSW 116
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
N++++G V++G + A VFD MPERDVVSW+TM++GY Q+G L + L + R GI+
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
NE + R H + F V + +++D YAKCG +E ++
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 229 FESISGKD--IWT-----------------------------WNVMICGLASHGLAKDAL 257
F+ ++ KD IWT W +I G G AL
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 258 ALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDL 317
LF K ++ G P TF L A + + GK M+ ++P ++D+
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDM 355
Query: 318 LARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
+++G ++ + + + D V W T++ A HG ++ + +I+
Sbjct: 356 YSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 202/350 (57%), Gaps = 2/350 (0%)
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
V+ N++++G+ + GEI A +VFD M ER+ SW T+I + +NG + L+ F +M++
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEK 224
+G+RP G+ VH+ + +F + V V + L+ MY KCG + K
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 225 SRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKF-LSEGFIPVNVTFVGVLNACS 283
S+ +F+ KDI WN +I G ASHGL ++AL +F + LS P VTFV L+ACS
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 284 MGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLW 343
G+V EG + + M +G++P HY CMVD+L RAG +EA+ +I++MTVEPD +W
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 344 ATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEK 403
+LL AC+ H +D+ E KLI+++P + G Y+ L+ +YA +W DV +RKLM +
Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Query: 404 VSKKVAGWSLVELEGGIHHFVAGD-KDHDCSSDIYRMLETIGQGITAAGY 452
+ +K G S E+E +H F G H I ++L+ + + AGY
Sbjct: 565 LVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGY 614
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 137/329 (41%), Gaps = 77/329 (23%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
+D R ++IH C+ G V+ + +F+E + V+TW +++ G +N + DA K+
Sbjct: 170 KDNIARTSMIHGLCKEGR-VDEAREIFDEMSE---RSVITWTTMVTGYGQNNRVDDARKI 225
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
FD MPE+ VSW++M+MGYVQNG +ED E F VM ++P
Sbjct: 226 FDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM---PVKP------------------ 264
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
V A++ + G I K+R +F+S+ ++ +W +I
Sbjct: 265 ------------------VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIH 306
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC------ 301
+G +AL LF +G P T + +L+ C+ + GK+ +V C
Sbjct: 307 ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV 366
Query: 302 YGIQPEMEHY------------------------GCMVDLLARAGLVDEAVHLIETM--- 334
Y M Y ++ A GL +EA+ + M
Sbjct: 367 YVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLS 426
Query: 335 -TVEPDPVLWATLLDACKVHGFVDMGEKI 362
+ +P+ V + L AC G V+ G KI
Sbjct: 427 GSTKPNEVTFVATLSACSYAGMVEEGLKI 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 127/270 (47%), Gaps = 31/270 (11%)
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
+++F+E D ++++WN +++G ++NGEI +A KVFD MPER+VVSW+ ++ GYV NG
Sbjct: 68 RKLFDEMPD---RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNG 124
Query: 151 LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP--- 207
++ F M EK + GR ++ K +P
Sbjct: 125 KVDVAESLFWKMPEKN---------KVSWTVMLIGFLQDGRI----DDACKLYEMIPDKD 171
Query: 208 --VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
T+++ K G ++++R +F+ +S + + TW M+ G + DA +F
Sbjct: 172 NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE 231
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
+ V++ +L G + + + F +M ++P + M+ L + G +
Sbjct: 232 K----TEVSWTSMLMGYVQNGRIEDAEELFEVM----PVKPVIA-CNAMISGLGQKGEIA 282
Query: 326 EAVHLIETMTVEPDPVLWATLLDACKVHGF 355
+A + ++M E + W T++ + +GF
Sbjct: 283 KARRVFDSMK-ERNDASWQTVIKIHERNGF 311
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 127/298 (42%), Gaps = 56/298 (18%)
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
+ +WNS++AG N RDA K+FDEMP+R+++SW+ ++ GY++NG +++ + F +M E
Sbjct: 48 ISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPE 107
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEK 224
+ V TALV Y G ++
Sbjct: 108 R---------------------------------------NVVSWTALVKGYVHNGKVDV 128
Query: 225 SRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSM 284
+ +LF + K+ +W VM+ G G DA L+ + N+ +++
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD----NIARTSMIHGLCK 184
Query: 285 GGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWA 344
G V E + F+ M + I + MV + VD+A + + M E V W
Sbjct: 185 EGRVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWT 238
Query: 345 TLLDACKVHGFVDMGEKIG-----NKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVR 397
++L +G ++ E++ +I + M G + G AKAR+ D ++ R
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISG--LGQKGEIAKARRVFDSMKER 294
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 136/304 (44%), Gaps = 24/304 (7%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
R++ N L+ Y + G ++ ++VF+ + +VV+W +++ G V NG++ AE +
Sbjct: 77 RNIISWNGLVSGYMKNGE-IDEARKVFDLMPE---RNVVSWTALVKGYVHNGKVDVAESL 132
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
F +MPE++ VSW+ M++G++Q+G ++D + + ++ +K N
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD---NIARTSMIHGLCKEGRVD 189
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
E E +V T +V Y + ++ +R +F+ + K +W M+ G
Sbjct: 190 EAREIFDEMSER-----SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGY 244
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
+G +DA LF + I N G+ G +++ +R F+ M +
Sbjct: 245 VQNGRIEDAEELFEVMPVKPVIACNAMISGL----GQKGEIAKARRVFDSMKERNDAS-- 298
Query: 308 MEHYGCMVDLLARAGLVDEAVH---LIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGN 364
+ ++ + R G EA+ L++ V P ++L C + G+++
Sbjct: 299 ---WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 365 KLIQ 368
+L++
Sbjct: 356 QLVR 359
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 22 MLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYC 81
+L +++ V+P T L C A+ L G QVHA +V+ F DV+V + L+ +Y
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLAS--LHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 82 ECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP-----ERDV 136
+CG V+S K +F+ D++ WNS+++G +G +A KVF EMP + +
Sbjct: 378 KCGELVKS-KLIFDR---FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNE 433
Query: 137 VSWSTMIMGYVQNGLLEDGLECFSVMREK-GIRP 169
V++ + G++E+GL+ + M G++P
Sbjct: 434 VTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 26/176 (14%)
Query: 202 FRITVPVGTALVDM--YAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALAL 259
+ T+P TA V + ++ G I ++R LF+S K I +WN M+ G ++ + +DA L
Sbjct: 11 YSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKL 70
Query: 260 FHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME--HYGCMVDL 317
F + I N G+++ G + E ++ F+LM PE + +V
Sbjct: 71 FDEMPDRNIISWN----GLVSGYMKNGEIDEARKVFDLM-------PERNVVSWTALVKG 119
Query: 318 LARAGLVDEAVHLIETMTVEPDPVLWATLL----------DACKVHGFVDMGEKIG 363
G VD A L M E + V W +L DACK++ + + I
Sbjct: 120 YVHNGKVDVAESLFWKMP-EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIA 174
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 244/435 (56%), Gaps = 16/435 (3%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLG--FARDVF 71
E++ +Y M+ ++P+++T L C + LG GV H + + G ++ ++
Sbjct: 215 EALKLYFKMVSDG--IEPDEYTVLSLLVCCGHLSDIRLGKGV--HGWIERRGPVYSSNLI 270
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
+ NAL+ +Y +C S + KR F+ + D+ +WN+++ G VR G++ A+ VFD+M
Sbjct: 271 LSNALLDMYFKCKESGLA-KRAFDAMKK---KDMRSWNTMVVGFVRLGDMEAAQAVFDQM 326
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGL-ECFSVMR--EKGIRPNEXXXXXXXXXXXXXXXXE 188
P+RD+VSW++++ GY + G + + E F M EK ++P+
Sbjct: 327 PKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK-VKPDRVTMVSLISGAANNGELS 385
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
GR+VH + L+ + + +AL+DMY KCG IE++ +F++ + KD+ W MI GLA
Sbjct: 386 HGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
HG + AL LF + EG P NVT + VL ACS GLV EG FN M D +G PE
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPET 505
Query: 309 EHYGCMVDLLARAGLVDEAVHLIE-TMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
EHYG +VDLL RAG V+EA +++ M + P +W ++L AC+ ++ E +L+
Sbjct: 506 EHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELL 565
Query: 368 QLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGD 427
+L+P +G YV L+ IYA +W + R+ M + KK AG+S V G+H FVA +
Sbjct: 566 KLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAE 625
Query: 428 K-DHDCSSDIYRMLE 441
K +H ++I R+L+
Sbjct: 626 KQNHPRWTEIKRILQ 640
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 159/385 (41%), Gaps = 80/385 (20%)
Query: 6 AKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLG 65
+ +S +E +YS+M+R R V P++ TF + + +A+S L Q+H H++ G
Sbjct: 108 SAVSSSKNECFGLYSSMIRHR--VSPDRQTFLYLM-----KASSFLSEVKQIHCHIIVSG 160
Query: 66 -FARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
+ ++ N+L+ Y E G+ GV A
Sbjct: 161 CLSLGNYLWNSLVKFYMELGN---------------------------FGV--------A 185
Query: 125 EKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXX 184
EKVF MP DV S++ MI+GY + G + L+ + M GI P+E
Sbjct: 186 EKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHL 245
Query: 185 XXXECGRFVHSTIESLK--FRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNV 242
G+ VH IE + + + AL+DMY KC ++ F+++ KD+ +WN
Sbjct: 246 SDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNT 305
Query: 243 MICGLASHGLAKDALALFHKF---------------------------------LSEGFI 269
M+ G G + A A+F + + E
Sbjct: 306 MVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVK 365
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
P VT V +++ + G +S G R+ + +V ++ + ++D+ + G+++ A
Sbjct: 366 PDRVTMVSLISGAANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFM 424
Query: 330 LIETMTVEPDPVLWATLLDACKVHG 354
+ +T T E D LW +++ HG
Sbjct: 425 VFKTAT-EKDVALWTSMITGLAFHG 448
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 221/452 (48%), Gaps = 40/452 (8%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI+ A+ N E+I + M + + +K +Q+ F L AC A + G Q+HA
Sbjct: 241 MIKGLAQ-NGLAKEAIECFREM--KVQGLKMDQYPFGSVLPACGGLGA--INEGKQIHAC 295
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+++ F ++V +ALI +YC+C
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKCKC----------------------------------- 320
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ A+ VFD M +++VVSW+ M++GY Q G E+ ++ F M+ GI P+
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
E G H + V V +LV +Y KCG I+ S LF ++ +D +W
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
M+ A G A + + LF K + G P VT GV++ACS GLV +G+RYF LM
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
YGI P + HY CM+DL +R+G ++EA+ I M PD + W TLL AC+ G +++G+
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Query: 361 KIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGI 420
LI+LDP H Y L+ IYA KW+ V ++R+ M EK KK G S ++ +G +
Sbjct: 561 WAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKL 620
Query: 421 HHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
H F A D+ IY LE + I GY
Sbjct: 621 HSFSADDESSPYLDQIYAKLEELNNKIIDNGY 652
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 166/334 (49%), Gaps = 17/334 (5%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G Q+H V+KLGF + V + L+++Y G + K+VF +D + V +NS++
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGC-ISDAKKVFYGLDD---RNTVMYNSLMG 213
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
G++ G I DA ++F M E+D VSW+ MI G QNGL ++ +ECF M+ +G++ ++
Sbjct: 214 GLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYP 272
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS 233
G+ +H+ I F+ + VG+AL+DMY KC C+ ++ +F+ +
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR 293
K++ +W M+ G G A++A+ +F G P + T ++AC+ + EG +
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 294 YFNLMVDCYGIQPEMEHY----GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
+ I + HY +V L + G +D++ L M V D V W ++ A
Sbjct: 393 FHG-----KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
Query: 350 CKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGI 383
G ++ +K++Q DG V L G+
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDG--VTLTGV 478
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 170/421 (40%), Gaps = 81/421 (19%)
Query: 50 GLGSGVQ------VHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCS 103
GLG+ Q +H ++++ + F+ N ++H Y SS + +RVF+
Sbjct: 15 GLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYA-RRVFDRIPQ---P 70
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF-SVM 162
++ +WN++L + G I + E F+++P+RD V+W+ +I GY +GL+ ++ + ++M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 163 REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI 222
R+ G+ +H + L F + VG+ L+ MYA GCI
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 223 EKSRALF-----------ESISG-------------------KDIWTWNVMICGLASHGL 252
++ +F S+ G KD +W MI GLA +GL
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF---------------NL 297
AK+A+ F + +G F VL AC G ++EGK+ +
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 298 MVDCY---------------GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPD 339
++D Y Q + + MV + G +EAV + M ++PD
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 340 PVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYV----QLAGIYAKARKWEDVVR 395
+ AC ++ G + K I + HYV L +Y K +D R
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLI---HYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 396 V 396
+
Sbjct: 428 L 428
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 230/438 (52%), Gaps = 21/438 (4%)
Query: 7 KANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGF 66
+ N E++ ++ +MLR R ++P++ TF L ACT LG G+++H+ +VK G
Sbjct: 459 EQNGKGYETLFLFVSMLRSR--IEPDEFTFGSILKACT---GGSLGYGMEIHSSIVKSGM 513
Query: 67 ARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEK 126
A + V +LI +Y +CG EE + + S +V +G + + EK
Sbjct: 514 ASNSSVGCSLIDMYSKCG---------MIEEAEKIHSRFFQRANV------SGTMEELEK 558
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
+ ++ + VSW+++I GYV ED F+ M E GI P++
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 618
Query: 187 XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICG 246
G+ +H+ + + + V + + LVDMY+KCG + SR +FE +D TWN MICG
Sbjct: 619 AGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG 678
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
A HG ++A+ LF + + E P +VTF+ +L AC+ GL+ +G YF +M YG+ P
Sbjct: 679 YAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDP 738
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH-GFVDMGEKIGNK 365
++ HY MVD+L ++G V A+ LI M E D V+W TLL C +H V++ E+
Sbjct: 739 QLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAA 798
Query: 366 LIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVA 425
L++LDP Y L+ +YA A WE V +R+ M KK G S VEL+ +H F+
Sbjct: 799 LLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLV 858
Query: 426 GDKDHDCSSDIYRMLETI 443
GDK H +IY L I
Sbjct: 859 GDKAHPRWEEIYEELGLI 876
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 113/249 (45%), Gaps = 6/249 (2%)
Query: 35 TFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVF 94
F+F C K+ A LG Q HAH++ GF FV N L+ +Y V S VF
Sbjct: 50 NFSFVFKECAKQGALELGK--QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFV-SASMVF 106
Query: 95 EEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLED 154
++ DVV+WN ++ G ++ ++ A F+ MP RDVVSW++M+ GY+QNG
Sbjct: 107 DK---MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLK 163
Query: 155 GLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVD 214
+E F M +GI + G +H + + V +AL+D
Sbjct: 164 SIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLD 223
Query: 215 MYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVT 274
MYAK +S +F+ I K+ +W+ +I G + L AL F +
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 275 FVGVLNACS 283
+ VL +C+
Sbjct: 284 YASVLRSCA 292
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 146/346 (42%), Gaps = 41/346 (11%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N +SI ++ M R ++ + TF L C+ + LG +Q+H VV++G
Sbjct: 158 NGESLKSIEVFVDM--GREGIEFDGRTFAIILKVCSFLEDTSLG--MQIHGIVVRVGCDT 213
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
DV +AL+ +Y + VES + VF
Sbjct: 214 DVVAASALLDMYAKGKRFVESLR-----------------------------------VF 238
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+PE++ VSWS +I G VQN LL L+ F M++ ++
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G +H+ F V TA +DMYAKC ++ ++ LF++ + ++N MI G +
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
AL LFH+ +S G ++ GV AC++ +SEG + + L + + ++
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS-SLSLDV 417
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
+D+ + + EA + + M D V W ++ A + +G
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 156/404 (38%), Gaps = 94/404 (23%)
Query: 50 GLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWN 109
GL G+Q++ +K + DV V NA I +Y +C + E+F+
Sbjct: 397 GLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFR------------------ 438
Query: 110 SVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRP 169
VFDEM RD VSW+ +I + QNG + L F M I P
Sbjct: 439 -----------------VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEP 481
Query: 170 NEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL- 228
+E G +HS+I VG +L+DMY+KCG IE++ +
Sbjct: 482 DEFTFGSILKACTGGSLG-YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 540
Query: 229 ---------------FESISGKDIW----TWNVMICGLASHGLAKDALALFHKFLSEGFI 269
E + K + +WN +I G ++DA LF + + G
Sbjct: 541 SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYF---------------NLMVDCY------------ 302
P T+ VL+ C+ GK+ + +VD Y
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 660
Query: 303 ---GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDACKVHGFV 356
++ + + M+ A G +EA+ L E M +E P+ V + ++L AC G +
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720
Query: 357 DMGEK---IGNKLIQLDPM--HDGHYVQLAGIYAKARKWEDVVR 395
D G + + + LDP H + V + G K ++ +++R
Sbjct: 721 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIR 764
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 131/338 (38%), Gaps = 53/338 (15%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
+Q + L +C A S L G Q+HAH +K FA D VR A + +Y +C +
Sbjct: 280 SQSIYASVLRSCA--ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDN------ 331
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL 151
++DA+ +FD + S++ MI GY Q
Sbjct: 332 -----------------------------MQDAQILFDNSENLNRQSYNAMITGYSQEEH 362
Query: 152 LEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTA 211
L F + G+ +E G ++ + V V A
Sbjct: 363 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422
Query: 212 LVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
+DMY KC + ++ +F+ + +D +WN +I +G + L LF L P
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 482
Query: 272 NVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC-MVDLLARAGLVDEAVHL 330
TF +L AC+ GG + G + +V G+ GC ++D+ ++ G+++EA
Sbjct: 483 EFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASN-SSVGCSLIDMYSKCGMIEEA--- 536
Query: 331 IETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
+ + V G ++ EK+ NK +Q
Sbjct: 537 ---------EKIHSRFFQRANVSGTMEELEKMHNKRLQ 565
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 251 bits (641), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 223/417 (53%), Gaps = 10/417 (2%)
Query: 40 LHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEED 99
L +C +A S +Q HA + KLG+ + + + Y C S R
Sbjct: 37 LESC--KAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSY--LARRLLLWFL 92
Query: 100 TLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF 159
+L V N ++ +++ GE A+KV +++V++W+ MI GYV+N E+ L+
Sbjct: 93 SLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKAL 152
Query: 160 SVMRE-KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAK 218
M I+PN+ ++VHS + + + +ALVD+YAK
Sbjct: 153 KNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK 212
Query: 219 CGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGV 278
CG I SR +F S+ D+ WN MI G A+HGLA +A+ +F + +E P ++TF+G+
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGL 272
Query: 279 LNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEP 338
L CS GL+ EGK YF LM + IQP++EHYG MVDLL RAG V EA LIE+M +EP
Sbjct: 273 LTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEP 332
Query: 339 DPVLWATLLDACKVHGFVDMGE-KIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVR 397
D V+W +LL + + + ++GE I N L G YV L+ IY+ +KWE +VR
Sbjct: 333 DVVIWRSLLSSSRTYKNPELGEIAIQN----LSKAKSGDYVLLSNIYSSTKKWESAQKVR 388
Query: 398 KLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGYPS 454
+LM ++ +K G S +E G IH F AGD H + IY++LE + Q + G+ S
Sbjct: 389 ELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVS 445
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 11/146 (7%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+KPN+ +F +L AC + L VH+ ++ G + + +AL+ +Y +CG +
Sbjct: 161 IKPNKFSFASSLAACAR--LGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCG-DIG 217
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
+ + VF + +DV WN+++ G +G +A +VF EM V S +G +
Sbjct: 218 TSREVFYSVKR---NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLT 274
Query: 149 N----GLLEDGLECFSVM-REKGIRP 169
GLLE+G E F +M R I+P
Sbjct: 275 TCSHCGLLEEGKEYFGLMSRRFSIQP 300
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 228/423 (53%), Gaps = 20/423 (4%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGS---GVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
++P+ F+ + AC + LGS G QVH H + +A D V+++L+ +Y +CG
Sbjct: 101 LRPDDFVFSALVKAC-----ANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGL 155
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
+ S K VF+ + ++W ++++G ++G +A ++F +P +++ SW+ +I G
Sbjct: 156 -LNSAKAVFDS---IRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISG 211
Query: 146 YVQNGLLEDGLECFSVM----REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLK 201
+VQ+G GLE FSV RE+ + GR VH + +L
Sbjct: 212 FVQSG---KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALG 268
Query: 202 FRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFH 261
F V + AL+DMYAKC + ++ +F + +D+ +W +I G+A HG A+ ALAL+
Sbjct: 269 FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD 328
Query: 262 KFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARA 321
+S G P VTFVG++ ACS G V +G+ F M YGI+P ++HY C++DLL R+
Sbjct: 329 DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 388
Query: 322 GLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD-GHYVQL 380
GL+DEA +LI TM PD WA LL ACK G MG +I + L+ + D Y+ L
Sbjct: 389 GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILL 448
Query: 381 AGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRML 440
+ IYA A W V R+ + E +K G S VE+ F AG+ H DI+R+L
Sbjct: 449 SNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLL 508
Query: 441 ETI 443
+ +
Sbjct: 509 KKL 511
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNS 110
L + +HAH+VKLG + + N L+++Y +CG++ +
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHAL-------------------- 58
Query: 111 VLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGL-ECFSVMREKGIRP 169
+VFDEMP RD ++W++++ Q L L SV G+RP
Sbjct: 59 ---------------QVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRP 103
Query: 170 NEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALF 229
++ + GR VH ++ V ++LVDMYAKCG + ++A+F
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 230 ESISGKDIWTWNVMICGLASHGLAKDALALF 260
+SI K+ +W M+ G A G ++AL LF
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
+ +H+ I L P+ LV++Y KCG + +F+ + +D W ++ L
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 250 HGLAKDALALFHKFLSEGFI-PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
L+ L++F S + P + F ++ AC+ G + G++ V C+ I E
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ-----VHCHFIVSEY 136
Query: 309 EH----YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEK 361
+ +VD+ A+ GL++ A + +++ V+ + + W + V G+ G K
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAM-----VSGYAKSGRK 187
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 231/463 (49%), Gaps = 35/463 (7%)
Query: 22 MLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYC 81
+L R VKP++ TF F L + +K LG + HA +K D FVR +L+ +Y
Sbjct: 115 ILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL--HAATLKNFVDCDSFVRLSLVDMYA 172
Query: 82 ECGSSVESFKRVFEEEEDTLCSDVV--------------------------------TWN 109
+ G +F+ VFEE D + + + +W+
Sbjct: 173 KTGQLKHAFQ-VFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWS 231
Query: 110 SVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRP 169
+++ G V +GE+ A+++F+ MPE++VVSW+T+I G+ Q G E + + M EKG++P
Sbjct: 232 TLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKP 291
Query: 170 NEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALF 229
NE G +H I ++ +GTALVDMYAKCG ++ + +F
Sbjct: 292 NEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVF 351
Query: 230 ESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVS 289
+++ KDI +W MI G A HG A+ F + + G P V F+ VL AC V
Sbjct: 352 SNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVD 411
Query: 290 EGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
G +F+ M Y I+P ++HY +VDLL RAG ++EA L+E M + PD WA L A
Sbjct: 412 LGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRA 471
Query: 350 CKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVA 409
CK H E + L++LDP G Y+ L +A +DV + R + +++ ++
Sbjct: 472 CKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSL 531
Query: 410 GWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
GWS +EL+G ++ F AGD H + +I L+ I GY
Sbjct: 532 GWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGY 574
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 229/452 (50%), Gaps = 38/452 (8%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I + K + +E+I ++S M+ + V+PN TF+ A AC + +G V
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGH-VEPNHFTFSSAFKACGNLSDPRVGKQV----- 395
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
LG ++FKR L S+ NSV++ V++
Sbjct: 396 ---LG----------------------QAFKR-------GLASNSSVANSVISMFVKSDR 423
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ DA++ F+ + E+++VS++T + G +N E + S + E+ + +
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
G +HS + L PV AL+ MY+KCG I+ + +F + +++ +W
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
MI G A HG A L F++ + EG P VT+V +L+ACS GLVSEG R+FN M +
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
+ I+P+MEHY CMVDLL RAGL+ +A I TM + D ++W T L AC+VH ++G+
Sbjct: 604 DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGK 663
Query: 361 KIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGI 420
K+++LDP Y+QL+ IYA A KWE+ +R+ M E+ K G S +E+ I
Sbjct: 664 LAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKI 723
Query: 421 HHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
H F GD H + IY L+ + I GY
Sbjct: 724 HKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 138/342 (40%), Gaps = 42/342 (12%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMP---ERDVVSWSTMIMGYVQNGLLEDGLECFS 160
D V +NS+++ ++G+ AE VF+ M +RDVVSWS M+ Y NG D ++ F
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 161 VMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHS-TIESLKFRITVPVGTALVDMYAKC 219
E G+ PN+ GR +++ F V VG +L+DM+ K
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 220 -GCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGV 278
E + +F+ +S ++ TW +MI G ++A+ F + GF T V
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 279 LNACSMGGLVSEGKRYFNLMV--------------------------DCYGIQPEMEHYG 312
+AC+ +S GK+ + + DC + ME +
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335
Query: 313 CM------VDLLARAGLVDEAVHLIETMT----VEPDPVLWATLLDACKVHGFVDMGEKI 362
M + L EA++L M VEP+ +++ AC +G+++
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 363 GNKLIQLDPMHDGHYVQ-LAGIYAKARKWEDVVRVRKLMIEK 403
+ + + + ++ K+ + ED R + + EK
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 142/359 (39%), Gaps = 42/359 (11%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P E+I + M+ + ++ T + AC + L G Q+H+ ++ G DV
Sbjct: 250 PREAIRFFLDMVLSG--FESDKFTLSSVFSACAE--LENLSLGKQLHSWAIRSGLVDDV- 304
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
+L+ +Y +C + +G + D KVFD M
Sbjct: 305 -ECSLVDMYAKCSA--------------------------------DGSVDDCRKVFDRM 331
Query: 132 PERDVVSWSTMIMGYVQN-GLLEDGLECFSVMREKG-IRPNEXXXXXXXXXXXXXXXXEC 189
+ V+SW+ +I GY++N L + + FS M +G + PN
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
G+ V V +++ M+ K +E ++ FES+S K++ ++N + G
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
+ + A L + TF +L+ + G + +G++ + +V G+
Sbjct: 452 NLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQP 510
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
++ + ++ G +D A + M + + W +++ HGF + N++I+
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 142 MIMGYVQNGLLEDGLECFSVMREKGIRP-NEXXXXXXXXXXXXXXXXECGRFVHSTIESL 200
+I+ ++ G L + +M GIRP + G+ VH+ +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 201 KFRITVPVGTALVDMYAKCGCIEKSRALFESI---SGKDIWTWNVMICGLASHGLAKDAL 257
+ +L+ +Y+K G K+ +FE++ +D+ +W+ M+ ++G DA+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 258 ALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC-MVD 316
+F +FL G +P + + V+ ACS V G+ ++ + ++ GC ++D
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLID 210
Query: 317 LLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
+ + E + + E + V W ++ C GF
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 237/426 (55%), Gaps = 11/426 (2%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
+S P +++ Y +LR FV P+ +TF +L +C ++ + SG H +K G +
Sbjct: 96 SSSPKQALGFYFDILRFG-FV-PDSYTFV-SLISCIEKTCC-VDSGKMCHGQAIKHGCDQ 151
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+ V+N+L+H+Y CG+ ++ K++F E D+V+WNS++AG+VRNG++ A K+F
Sbjct: 152 VLPVQNSLMHMYTCCGA-LDLAKKLFVEIPK---RDIVSWNSIIAGMVRNGDVLAAHKLF 207
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
DEMP+++++SW+ MI Y+ + F M G + NE +
Sbjct: 208 DEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLK 267
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
GR VH+++ +V + TAL+DMY KC + +R +F+S+S ++ TWNVMI
Sbjct: 268 EGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHC 327
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
HG + L LF ++ P VTFVGVL C+ GLVS+G+ Y++LMVD + I+P
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNF 387
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNK 365
H CM +L + AG +EA ++ + V P+ WA LL + + G +GE I
Sbjct: 388 GHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKS 447
Query: 366 LIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVA 425
LI+ DP++ +Y L IY+ +WEDV RVR+++ E+ ++ G LV+L+ +H
Sbjct: 448 LIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRL 507
Query: 426 GDKDHD 431
G K+ +
Sbjct: 508 GCKEAE 513
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 216/446 (48%), Gaps = 39/446 (8%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
+S P SI Y+ ML +P+ TF FAL +C + + +++H V++ GF
Sbjct: 84 SSSPLNSILFYNRMLLSS-VSRPDLFTFNFALKSCER--IKSIPKCLEIHGSVIRSGFLD 140
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D V +L+ Y NG + A KVF
Sbjct: 141 DAIVATSLVRCYSA-----------------------------------NGSVEIASKVF 165
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
DEMP RD+VSW+ MI + GL L + M +G+ +
Sbjct: 166 DEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALN 225
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G +H ++ V V AL+DMYAKCG +E + +F + +D+ TWN MI G
Sbjct: 226 MGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYG 285
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
HG +A++ F K ++ G P +TF+G+L CS GLV EG +F +M + + P +
Sbjct: 286 VHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNV 345
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
+HYGCMVDL RAG ++ ++ +I + DPVLW TLL +CK+H +++GE KL+Q
Sbjct: 346 KHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQ 405
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
L+ + G YV + IY+ A + +RKL+ + V GWS +E+ +H FV DK
Sbjct: 406 LEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDK 465
Query: 429 DHDCSSDIYRML-ETIGQGITAAGYP 453
H S+ IY L E I + I A P
Sbjct: 466 MHPESAVIYSELGEVINRAILAGYKP 491
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 215/422 (50%), Gaps = 36/422 (8%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
+R +V+ + +T+T L AC+ G + H V+K G + NALI +Y +
Sbjct: 297 QRHWVETDIYTYTGLLSACSGEEHQIFGKSL--HGMVIKKGLEQVTSATNALISMYIQ-- 352
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIM 144
G + DA +F+ + +D++SW+++I
Sbjct: 353 -------------------------------FPTGTMEDALSLFESLKSKDLISWNSIIT 381
Query: 145 GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
G+ Q GL ED ++ FS +R I+ ++ + G+ +H+ F
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVS 441
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGK-DIWTWNVMICGLASHGLAKDALALFHKF 263
V ++L+ MY+KCG IE +R F+ IS K WN MI G A HGL + +L LF +
Sbjct: 442 NEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM 501
Query: 264 LSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGL 323
++ +VTF +L ACS GL+ EG NLM Y IQP MEHY VDLL RAGL
Sbjct: 502 CNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGL 561
Query: 324 VDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGI 383
V++A LIE+M + PDP++ T L C+ G ++M ++ N L++++P YV L+ +
Sbjct: 562 VNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHM 621
Query: 384 YAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETI 443
Y+ +KWE+ V+K+M E+ KKV GWS +E+ + F A D+ + DIY M++ +
Sbjct: 622 YSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDL 681
Query: 444 GQ 445
Q
Sbjct: 682 TQ 683
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 31/291 (10%)
Query: 71 FVRNALIHLYC-ECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFD 129
F + +L H Y +CGS SD+ N +L ++ G + A +FD
Sbjct: 16 FQKLSLTHCYAIKCGS----------------ISDIYVSNRILDSYIKFGFLGYANMLFD 59
Query: 130 EMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
EMP+RD VSW+TMI GY G LED F+ M+ G + +
Sbjct: 60 EMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDL 119
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
G VH + + V VG++LVDMYAKC +E + F+ IS + +WN +I G
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Query: 250 HGLAKDALALFHKFLSEGFIPVNV-TFVGVLNACSMGGLVSEGKRYFNLMVDCY------ 302
K A L + + ++ TF +L + + + NL+ +
Sbjct: 180 VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT-------LLDDPMFCNLLKQVHAKVLKL 232
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
G+Q E+ M+ A G V +A + + + D + W +++ H
Sbjct: 233 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 133/311 (42%), Gaps = 48/311 (15%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G QVH V+K G+ +V+V ++L+ +Y +C
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCE----------------------------- 150
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG-IRPNEX 172
+ DA + F E+ E + VSW+ +I G+VQ ++ +M K + +
Sbjct: 151 ------RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAG 204
Query: 173 XXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESI 232
+ VH+ + L + + + A++ YA CG + ++ +F+ +
Sbjct: 205 TFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGL 264
Query: 233 SG-KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNV-TFVGVLNACSMGGLVSE 290
G KD+ +WN MI G + H L + A LF + + ++ ++ T+ G+L+ACS
Sbjct: 265 GGSKDLISWNSMIAGFSKHELKESAFELFIQ-MQRHWVETDIYTYTGLLSACSGEEHQIF 323
Query: 291 GKRYFNLMVDCYGIQPEMEHYGCMVDLLAR--AGLVDEAVHLIETMTVEPDPVLWATLLD 348
GK +++ G++ ++ + + G +++A+ L E++ D + W ++
Sbjct: 324 GKSLHGMVIK-KGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLISWNSI-- 379
Query: 349 ACKVHGFVDMG 359
+ GF G
Sbjct: 380 ---ITGFAQKG 387
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
A SE + + LR +K + + F+ L +C+ A LG Q+HA K GF
Sbjct: 384 AQKGLSEDAVKFFSYLRSSE-IKVDDYAFSALLRSCSDLATLQLGQ--QIHALATKSGFV 440
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
+ FV ++LI +Y +CG +ES ++ F++ V WN+++ G ++G + + +
Sbjct: 441 SNEFVISSLIVMYSKCG-IIESARKCFQQISSK--HSTVAWNAMILGYAQHGLGQVSLDL 497
Query: 128 FDEMPERDV----VSWSTMIMGYVQNGLLEDGLECFSVMR 163
F +M ++V V+++ ++ GL+++GLE ++M
Sbjct: 498 FSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 207/359 (57%), Gaps = 4/359 (1%)
Query: 98 EDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER-DVVSWSTMIMGYVQNGLLEDGL 156
++ + + T N+++A + GE+ EK+F M ER D V+W++MI GY+ N LL L
Sbjct: 545 KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKAL 604
Query: 157 ECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMY 216
+ M + G R + E G VH+ V VG+ALVDMY
Sbjct: 605 DLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMY 664
Query: 217 AKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN-VTF 275
+KCG ++ + F ++ ++ ++WN MI G A HG ++AL LF +G P + VTF
Sbjct: 665 SKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTF 724
Query: 276 VGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT 335
VGVL+ACS GL+ EG ++F M D YG+ P +EH+ CM D+L RAG +D+ IE M
Sbjct: 725 VGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP 784
Query: 336 VEPDPVLWATLLDA-CKVHGF-VDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDV 393
++P+ ++W T+L A C+ +G ++G+K L QL+P + +YV L +YA +WED+
Sbjct: 785 MKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDL 844
Query: 394 VRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
V+ RK M + KK AG+S V ++ G+H FVAGDK H + IY+ L+ + + + AGY
Sbjct: 845 VKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGY 903
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 159/415 (38%), Gaps = 78/415 (18%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E++ M++ F NQ+ F L AC + + G+ G Q+H + KL +A
Sbjct: 80 NGEHKEALVFLRDMVKEGIF--SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 69 DVFVRNAL--------------------------------IHLYCECGSSVESFK----- 91
D V N L I +Y + G +F+
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 92 ---------------------------RVFEE-----EEDTLCSDVVTWNSVLAGVVRNG 119
R+ E+ ++ L +D+ + +++ ++G
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 120 EIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
+ A KVF++M R+ V+ + +++G V+ E+ + F M E
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 180 XXXXXXXXECG----RFVHS-TIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISG 234
E G R VH I + V +G LV+MYAKCG I +R +F ++
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 235 KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRY 294
KD +WN MI GL +G +A+ + +P + T + L++C+ G++
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 295 FNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
+ GI + ++ L A G ++E + +M E D V W +++ A
Sbjct: 438 HGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 118/300 (39%), Gaps = 38/300 (12%)
Query: 50 GLGSGVQVHAHVVKLGFAR-DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTW 108
GL G +VH HV+ G V + N L+++Y +CGS
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS----------------------- 364
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
I DA +VF M ++D VSW++MI G QNG + +E + MR I
Sbjct: 365 ------------IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
P + G+ +H L + V V AL+ +YA+ G + + R +
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 229 FESISGKDIWTWNVMICGLA-SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGL 287
F S+ D +WN +I LA S +A+ F G +TF VL+A S
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
GK+ L + I E ++ + G +D + M D V W +++
Sbjct: 533 GELGKQIHGLALK-NNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 4/191 (2%)
Query: 98 EDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLE 157
++ L DV N+++ + G+ A KVFDEMP R+ VSW+ ++ GY +NG ++ L
Sbjct: 29 KNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALV 88
Query: 158 CFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC--GRFVHSTIESLKFRITVPVGTALVDM 215
M ++GI N+ GR +H + L + + V L+ M
Sbjct: 89 FLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISM 148
Query: 216 YAKC-GCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVT 274
Y KC G + + F I K+ +WN +I + G + A +F +G P T
Sbjct: 149 YWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYT 208
Query: 275 FVG-VLNACSM 284
F V ACS+
Sbjct: 209 FGSLVTTACSL 219
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 150/385 (38%), Gaps = 77/385 (20%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ Y +M RR + P T +L +C + LG Q+H +KLG +V V
Sbjct: 398 EAVERYKSM--RRHDILPGSFTLISSLSSCASLKWAKLGQ--QIHGESLKLGIDLNVSVS 453
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
NAL+ LY E G E +++F + D V+WNS++ + R+ E
Sbjct: 454 NALMTLYAETGYLNEC-RKIFSSMPE---HDQVSWNSIIGALARS--------------E 495
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
R L + + CF + G + N E G+ +
Sbjct: 496 RS----------------LPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539
Query: 194 HSTIESLKFRITVPVGT--ALVDMYAKCGCIEKSRALFESIS-GKDIWTWNVMICGLASH 250
H +LK I T AL+ Y KCG ++ +F ++ +D TWN MI G +
Sbjct: 540 HGL--ALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597
Query: 251 GLAKDALALFHKFLSEG-------FIPVNVTFVGV--------LNACSMGGLVSEGKRYF 295
L AL L L G + V F V ++ACS+ +
Sbjct: 598 ELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657
Query: 296 NLMVDCYGIQPEMEH---------------YGCMVDLLARAGLVDEAVHLIETMTVE--- 337
+ +VD Y +++ + M+ AR G +EA+ L ETM ++
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717
Query: 338 -PDPVLWATLLDACKVHGFVDMGEK 361
PD V + +L AC G ++ G K
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFK 742
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 35 TFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVF 94
+F +A + + L G++VHA V+ DV V +AL+ +Y +CG ++ R F
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCG-RLDYALRFF 677
Query: 95 EEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP-----ERDVVSWSTMIMGYVQN 149
+ +WNS+++G R+G+ +A K+F+ M D V++ ++
Sbjct: 678 NTMP---VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHA 734
Query: 150 GLLEDGLECFSVMREK-GIRP 169
GLLE+G + F M + G+ P
Sbjct: 735 GLLEEGFKHFESMSDSYGLAP 755
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/503 (30%), Positives = 252/503 (50%), Gaps = 72/503 (14%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI+ + + P +S A+Y LR+ P+ TFT +C+ + + G+Q+H+
Sbjct: 48 MIKAYLETRQYP-DSFALYRD-LRKETCFAPDNFTFTTLTKSCS--LSMCVYQGLQLHSQ 103
Query: 61 VVKLGFARDVFV-----------------RNA--------------LIHLYCECGS---- 85
+ + GF D++V RNA LI Y CG
Sbjct: 104 IWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLA 163
Query: 86 ---------------------------SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRN 118
+ S +R+F+E V+TW +++ G
Sbjct: 164 SKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTH---KTVITWTTMIHGYCNI 220
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR-EKGIRPNEXXXXXX 177
+I A K+FD MPER++VSW+TMI GY QN ++G+ F M+ + P++
Sbjct: 221 KDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSV 280
Query: 178 XXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI 237
G + H ++ K V V TA++DMY+KCG IEK++ +F+ + K +
Sbjct: 281 LPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQV 340
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL 297
+WN MI G A +G A+ AL LF + E P +T + V+ AC+ GGLV EG+++F++
Sbjct: 341 ASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHV 399
Query: 298 MVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
M + G+ ++EHYGCMVDLL RAG + EA LI M EP+ ++ ++ L AC + ++
Sbjct: 400 MRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIE 458
Query: 358 MGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELE 417
E+I K ++L+P +DG+YV L +YA ++W+D V+ +M + +KK G SL+E+
Sbjct: 459 RAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEIN 518
Query: 418 GGIHHFVAGDKDHDCSSDIYRML 440
+ F++GD H I+ +L
Sbjct: 519 YIVSEFISGDTTHPHRRSIHLVL 541
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 191/349 (54%), Gaps = 1/349 (0%)
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
V+ N+++ G GEI A +VFD M +RD +W MI Y + G + L+ F+ M++
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEK 224
+G+RP+ + GR VH+ + +F V V + L+ MY KCG + K
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 225 SRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSM 284
++ +F+ S KDI WN +I G ASHGL ++AL +FH+ S G +P VT + +L ACS
Sbjct: 385 AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSY 444
Query: 285 GGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWA 344
G + EG F M + + P +EHY C VD+L RAG VD+A+ LIE+MT++PD +W
Sbjct: 445 AGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWG 504
Query: 345 TLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKV 404
LL ACK H +D+ E KL + +P + G YV L+ I A KW DV VRK M
Sbjct: 505 ALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNN 564
Query: 405 SKKVAGWSLVELEGGIHHFVAGD-KDHDCSSDIYRMLETIGQGITAAGY 452
K G S +E+ +H F G K+H + I MLE + AGY
Sbjct: 565 VSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGY 613
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 26/284 (9%)
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N+++ Y G E+ +++F+E + +VV+WN +++G ++N I +A VF+ MPE
Sbjct: 52 NSIVSGYFSNGLPKEA-RQLFDEMSE---RNVVSWNGLVSGYIKNRMIVEARNVFELMPE 107
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
R+VVSW+ M+ GY+Q G++ + F M E+ NE + R +
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKL 163
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
+ + V T ++ + G ++++R +F+ + +++ TW MI G +
Sbjct: 164 YDMMPVKD----VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
A LF + V++ +L ++ G + + + +F +M P C
Sbjct: 220 DVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPVIAC 268
Query: 314 --MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
M+ G + +A + + M + D W ++ A + GF
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMIKAYERKGF 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 47/242 (19%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ +++ M +++ V+P+ + L C A+ L G QVHAH+V+ F DV+V
Sbjct: 314 EALDLFAQM--QKQGVRPSFPSLISILSVCATLAS--LQYGRQVHAHLVRCQFDDDVYVA 369
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
+ L+ +Y +CG V++ K VF+ D++ WNS+++G +G +A K+F EMP
Sbjct: 370 SVLMTMYVKCGELVKA-KLVFDRFSS---KDIIMWNSIISGYASHGLGEEALKIFHEMPS 425
Query: 134 R----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
+ V+ ++ G LE+GLE F M K
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC---------------------- 463
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK-DIWTWNVMICGLA 248
V T+E + VDM + G ++K+ L ES++ K D W ++
Sbjct: 464 ---VTPTVEHY---------SCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK 511
Query: 249 SH 250
+H
Sbjct: 512 TH 513
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 33/288 (11%)
Query: 107 TWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG 166
+WNS+++G NG ++A ++FDEM ER+VVSW+ ++ GY++N ++ + F +M E+
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 167 IRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSR 226
+ E E + TV G + D G I+K+R
Sbjct: 110 V---VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD-----GRIDKAR 161
Query: 227 ALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGG 286
L++ + KD+ MI GL G +A +F + VT+ ++
Sbjct: 162 KLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNN 217
Query: 287 LVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLAR--AGLVDEAVHLIETMTVEPDPVLWA 344
V ++ F +M PE LL +G +++A E M ++P
Sbjct: 218 RVDVARKLFEVM-------PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKP------ 264
Query: 345 TLLDACK--VHGFVDMGEKIGNKLIQLDPMHDGHYVQLAG-IYAKARK 389
+ AC + GF ++GE I D M D G I A RK
Sbjct: 265 --VIACNAMIVGFGEVGE-ISKARRVFDLMEDRDNATWRGMIKAYERK 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 213 VDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN 272
+ ++ G I ++R F+S+ K I +WN ++ G S+GL K+A LF + + N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 273 VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME--HYGCMVDLLARAGLVDEAVHL 330
G+++ ++ E + F LM PE + MV + G+V EA L
Sbjct: 84 ----GLVSGYIKNRMIVEARNVFELM-------PERNVVSWTAMVKGYMQEGMVGEAESL 132
Query: 331 IETMTVEPDPVLWATLLDACKVHGFVDMGEKI 362
M E + V W + G +D K+
Sbjct: 133 FWRMP-ERNEVSWTVMFGGLIDDGRIDKARKL 163
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 233/416 (56%), Gaps = 11/416 (2%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI+C++ PP ES++ +S+M + R + +++T+ L +C+ + S L G VH
Sbjct: 73 MIKCYSLVG-PPLESLSFFSSM--KSRGIWADEYTYAPLLKSCS--SLSDLRFGKCVHGE 127
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+++ GF R +R ++ LY G ++ ++VF+E + +VV WN ++ G +G+
Sbjct: 128 LIRTGFHRLGKIRIGVVELYTSGGRMGDA-QKVFDEMSE---RNVVVWNLMIRGFCDSGD 183
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ +F +M ER +VSW++MI + G + LE F M ++G P+E
Sbjct: 184 VERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPI 243
Query: 181 XXXXXXXECGRFVHSTIESLK-FRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
+ G+++HST ES F+ + VG ALVD Y K G +E + A+F + +++ +
Sbjct: 244 SASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVS 303
Query: 240 WNVMICGLASHGLAKDALALFHKFLSEGFI-PVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
WN +I G A +G + + LF + EG + P TF+GVL CS G V G+ F LM
Sbjct: 304 WNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLM 363
Query: 299 VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDM 358
++ + ++ EHYG MVDL++R+G + EA ++ M V + +W +LL AC+ HG V +
Sbjct: 364 MERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKL 423
Query: 359 GEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLV 414
E +L++++P + G+YV L+ +YA+ +W+DV +VR LM + +K G S +
Sbjct: 424 AEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 112/277 (40%), Gaps = 34/277 (12%)
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
A +VF + +V+ ++ MI Y G + L FS M+ +GI +E
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAK------------------------- 218
G+ VH + F + +V++Y
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 219 ------CGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN 272
G +E+ LF+ +S + I +WN MI L+ G ++AL LF + + +GF P
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 273 VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG-CMVDLLARAGLVDEAVHLI 331
T V VL + G++ GK + + + G+ + G +VD ++G ++ A +
Sbjct: 235 ATVVTVLPISASLGVLDTGK-WIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 332 ETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
M + V W TL+ V+G + G + + +I+
Sbjct: 294 RKMQ-RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIE 329
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 244 bits (623), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 196/354 (55%), Gaps = 1/354 (0%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
D+ N+V+ + G + A VF+ +P DV+SW+T+I GY QNG + +E +++M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 164 EKG-IRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI 222
E+G I N+ G +H + + V V T+L DMY KCG +
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 223 EKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC 282
E + +LF I + WN +I HG + A+ LF + L EG P ++TFV +L+AC
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL 342
S GLV EG+ F +M YGI P ++HYGCMVD+ RAG ++ A+ I++M+++PD +
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 343 WATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIE 402
W LL AC+VHG VD+G+ L +++P H G++V L+ +YA A KWE V +R +
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHG 682
Query: 403 KVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGYPSVH 456
K +K GWS +E++ + F G++ H ++YR L + + GY H
Sbjct: 683 KGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDH 736
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 168/399 (42%), Gaps = 76/399 (19%)
Query: 40 LHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEED 99
L ACT+ A GV +H++ +K G ++FV N LI LY E G
Sbjct: 254 LSACTE--AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG--------------- 296
Query: 100 TLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF 159
+RD +KVFD M RD++SW+++I Y N + F
Sbjct: 297 --------------------RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLF 336
Query: 160 SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHS-TIESLKFRITVPVGTALVDMYAK 218
MR I+P+ R V T+ F + +G A+V MYAK
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 219 CGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNV-TFVG 277
G ++ +RA+F + D+ +WN +I G A +G A +A+ +++ EG I N T+V
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 278 VLNACSMGGLVSEGKR----------YFNLMV-----DCYGIQPEMEHYGCMVDLLARAG 322
VL ACS G + +G + Y ++ V D YG +E + + R
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 323 LV---------------DEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGN 364
V ++AV L + M V+PD + + TLL AC G VD G+
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF- 575
Query: 365 KLIQLD---PMHDGHYVQLAGIYAKARKWEDVVRVRKLM 400
+++Q D HY + +Y +A + E ++ K M
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 12/237 (5%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSV-MREKGIRPNEXXXXXX 177
G + A FD + RDV +W+ MI GY + G + + CFS+ M G+ P+
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 178 XXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI 237
G +H F V V +L+ +Y++ + +R LF+ + +D+
Sbjct: 160 LKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDM 216
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN-VTFVGVLNACSMGGLVSEGKRYFN 296
+WN MI G G AK+AL LS G ++ VT V +L+AC+ G + G +
Sbjct: 217 GSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHS 271
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
+ +G++ E+ ++DL A G + + + + M V D + W +++ A +++
Sbjct: 272 YSIK-HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYELN 326
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 166/442 (37%), Gaps = 102/442 (23%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI + +A + SE I +S + P+ TF L AC + G ++H
Sbjct: 123 MISGYGRAGNS-SEVIRCFSLFMLSSGLT-PDYRTFPSVLKACRT-----VIDGNKIHCL 175
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+K GF DV+V +LIHLY R
Sbjct: 176 ALKFGFMWDVYVAASLIHLYS-----------------------------------RYKA 200
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ +A +FDEMP RD+ SW+ MI GY Q+G ++ L G+R +
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMD----SVTVV 251
Query: 181 XXXXXXXECGRF-----VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK 235
E G F +HS + V L+D+YA+ G + + +F+ + +
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 236 DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFV---------GVLNAC---- 282
D+ +WN +I + A++LF + P +T + G + AC
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 283 -------------SMG----------GLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLA 319
++G GLV + FN + + ++ + ++ A
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN-----TDVISWNTIISGYA 426
Query: 320 RAGLVDEAVHLIETMTVE----PDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG 375
+ G EA+ + M E + W ++L AC G + G K+ +L++ D
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 376 HYV-QLAGIYAKARKWEDVVRV 396
V LA +Y K + ED + +
Sbjct: 487 FVVTSLADMYGKCGRLEDALSL 508
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 48/249 (19%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N SE+I +Y+ M + NQ T+ L AC++ A L G+++H ++K G
Sbjct: 428 NGFASEAIEMYNIMEEEGE-IAANQGTWVSVLPACSQ--AGALRQGMKLHGRLLKNGLYL 484
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
DVFV +L +Y +CG ++ ++ + V WN+++A +G A +F
Sbjct: 485 DVFVVTSLADMYGKCGRLEDALSLFYQIPR----VNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 129 DEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMR-EKGIRPNEXXXXXXXXXXXX 183
EM + D +++ T++ +GL+++G CF +M+ + GI P
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP-------------- 586
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK-DIWTWNV 242
SLK +VDMY + G +E + +S+S + D W
Sbjct: 587 ---------------SLKHY------GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGA 625
Query: 243 MICGLASHG 251
++ HG
Sbjct: 626 LLSACRVHG 634
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKF- 263
V + LV++Y G + +R F+ I +D++ WN+MI G G + + + F F
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 264 LSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGL 323
LS G P TF VL AC V +G + L + +G ++ ++ L +R
Sbjct: 145 LSSGLTPDYRTFPSVLKACRT---VIDGNKIHCLALK-FGFMWDVYVAASLIHLYSRYKA 200
Query: 324 VDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPM 372
V A L + M V D W ++ G + N L +D +
Sbjct: 201 VGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSV 248
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/425 (32%), Positives = 233/425 (54%), Gaps = 15/425 (3%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
++PN+ TF + + T LG Q+H + +K+G A +VFV +A+++ Y + S++
Sbjct: 89 IRPNEFTFGTVIGSSTTSRDVKLGK--QLHCYALKMGLASNVFVGSAVLNCYVKL-STLT 145
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
+R F++ D +VV+ ++++G ++ E +A +F MPER VV+W+ +I G+ Q
Sbjct: 146 DARRCFDDTRDP---NVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQ 202
Query: 149 NGLLEDGLECF-SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHS-TIESLKFRITV 206
G E+ + F ++RE + PNE G+ +H+ I+ L R V
Sbjct: 203 TGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNV 262
Query: 207 PVGTALVDMYAKCGCIEKSRALFESIS--GKDIWTWNVMICGLASHGLAKDALALFHKFL 264
V +L+ Y+KCG +E S F + ++I +WN MI G A +G ++A+A+F K +
Sbjct: 263 FVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMV 322
Query: 265 SE-GFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP---EMEHYGCMVDLLAR 320
+ P NVT +GVL AC+ GL+ EG YFN V+ Y P E+EHY CMVD+L+R
Sbjct: 323 KDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSR 381
Query: 321 AGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQL 380
+G EA LI++M ++P W LL C++H + + +K+++LDP YV L
Sbjct: 382 SGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVML 441
Query: 381 AGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRML 440
+ Y+ W++V +R+ M E K+ G S +E+ I FV DK+++ ++YRML
Sbjct: 442 SNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Query: 441 ETIGQ 445
+ Q
Sbjct: 502 ALVSQ 506
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 137/353 (38%), Gaps = 73/353 (20%)
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
IR+A KVFDE+PE DV+S + +I +V+ + + F + GIRPNE
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSR-------------- 226
+ G+ +H + V VG+A+++ Y K + +R
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 227 -----------------ALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG-F 268
+LF ++ + + TWN +I G + G ++A+ F L EG
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 269 IPVNVTF----VGVLNACSMGGLVS--------EGKRY----FNLMVDCYGIQPEME--- 309
IP TF + N S G S GKR+ +N ++ Y ME
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 310 --------------HYGCMVDLLARAGLVDEAVHLIETM----TVEPDPVLWATLLDACK 351
+ M+ A G +EAV + E M + P+ V +L AC
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 352 VHGFVDMGEKIGNKLIQ--LDP--MHDGHYVQLAGIYAKARKWEDVVRVRKLM 400
G + G NK + DP + HY + + +++ ++++ + K M
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 17/156 (10%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVK-LGFARDVFV 72
E++ + MLR V PN+ TF A+ A + A+ G+G +HA +K LG +VFV
Sbjct: 208 EAVNTFVDMLREG-VVIPNESTFPCAITAISNIASH--GAGKSIHACAIKFLGKRFNVFV 264
Query: 73 RNALIHLYCECGS---SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFD 129
N+LI Y +CG+ S+ +F ++ EE+ ++V+WNS++ G NG +A +F+
Sbjct: 265 WNSLISFYSKCGNMEDSLLAFNKLEEEQR-----NIVSWNSMIWGYAHNGRGEEAVAMFE 319
Query: 130 EM-PERDVVSWSTMIMGYV----QNGLLEDGLECFS 160
+M + ++ + I+G + GL+++G F+
Sbjct: 320 KMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFN 355
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 218/408 (53%), Gaps = 15/408 (3%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLG---SGVQVHAHVVKL 64
AN+ E++ +++ M R + + T ++AC GLG +G Q+H H K
Sbjct: 296 ANNMKMEALVLFNEM---RNETREDSRTLAAVINACI-----GLGFLETGKQMHCHACKF 347
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
G D+ V + L+ +Y +CGS +E+ K +F E E D + NS++ G I DA
Sbjct: 348 GLIDDIVVASTLLDMYSKCGSPMEACK-LFSEVESY---DTILLNSMIKVYFSCGRIDDA 403
Query: 125 EKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXX 184
++VF+ + + ++SW++M G+ QNG + LE F M + + +E
Sbjct: 404 KRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASI 463
Query: 185 XXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMI 244
E G V + + V ++L+D+Y KCG +E R +F+++ D WN MI
Sbjct: 464 SSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMI 523
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGI 304
G A++G +A+ LF K G P +TF+ VL AC+ GLV EG++ F M +G
Sbjct: 524 SGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGF 583
Query: 305 QPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGN 364
P+ EH+ CMVDLLARAG V+EA++L+E M + D +W+++L C +G+ MG+K
Sbjct: 584 VPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAE 643
Query: 365 KLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
K+I+L+P + YVQL+ I+A + WE VRKLM E K G S
Sbjct: 644 KIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 150/354 (42%), Gaps = 46/354 (12%)
Query: 35 TFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS---SVESFK 91
T T L AC + A L G Q+HA ++ G D + ++L+++Y +CG + +
Sbjct: 189 TLTTVLKACAELEA--LKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLE 246
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL 151
++ E ++ +L +++++G G + ++ +FD R V+ W++MI GY+ N +
Sbjct: 247 QIREPDDHSL-------SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNM 299
Query: 152 LEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTA 211
+ L F+ MR + R + E G+ +H + V +
Sbjct: 300 KMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST 358
Query: 212 LVDMYAKCGC-------------------------------IEKSRALFESISGKDIWTW 240
L+DMY+KCG I+ ++ +FE I K + +W
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 418
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N M G + +G + L FH+ V+ V++AC+ + G++ F
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARAT 477
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
G+ + ++DL + G V+ + +TM V+ D V W +++ +G
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 163/370 (44%), Gaps = 63/370 (17%)
Query: 55 VQVHAHVVKLGFARDVFVR---------NALIHLYCECGSSVESFKRVFEEEEDTLCSDV 105
+Q+++ K+G AR++F N +I Y G S R F+ + D
Sbjct: 69 LQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSL-RFFDMMPER---DG 124
Query: 106 VTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREK 165
+WN V++G + GE+ A ++F+ MPE+DVV+ ++++ GY+ NG E+ L F +E
Sbjct: 125 YSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF---KEL 181
Query: 166 GIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCG----- 220
+ +CG+ +H+ I + ++LV++YAKCG
Sbjct: 182 NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMA 241
Query: 221 ------------------------C--IEKSRALFESISGKDIWTWNVMICGLASHGLAK 254
C + +SR LF+ S + + WN MI G ++ +
Sbjct: 242 SYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKM 301
Query: 255 DALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC----YGIQPEMEH 310
+AL LF++ +E + T V+NAC G + GK+ + C +G+ ++
Sbjct: 302 EALVLFNEMRNETR-EDSRTLAAVINACIGLGFLETGKQ-----MHCHACKFGLIDDIVV 355
Query: 311 YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD----MGEKIGNK- 365
++D+ ++ G EA L + D +L +++ G +D + E+I NK
Sbjct: 356 ASTLLDMYSKCGSPMEACKLFSEVE-SYDTILLNSMIKVYFSCGRIDDAKRVFERIENKS 414
Query: 366 LIQLDPMHDG 375
LI + M +G
Sbjct: 415 LISWNSMTNG 424
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 46/240 (19%)
Query: 101 LCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFS 160
L S V+ N +L R+G++ A +FDEMP+R+ SW+TMI GY+ +G L F
Sbjct: 58 LSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFD 117
Query: 161 VMREK-GIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKC 219
+M E+ G N +V +AK
Sbjct: 118 MMPERDGYSWN----------------------------------------VVVSGFAKA 137
Query: 220 GCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVL 279
G + +R LF ++ KD+ T N ++ G +G A++AL LF + F +T VL
Sbjct: 138 GELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVL 194
Query: 280 NACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPD 339
AC+ + GK+ + + G++ + + +V++ A+ G + A +++E + EPD
Sbjct: 195 KACAELEALKCGKQ-IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR-EPD 252
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 20/203 (9%)
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
V V L+ MY++ G + +R LF+ + ++ ++WN MI G + G +L F
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
NV G A G +S +R FN M + + +G +++ G +
Sbjct: 122 RDGYSWNVVVSGFAKA----GELSVARRLFNAMPEKDVVTLNSLLHGYILN-----GYAE 172
Query: 326 EAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKL----IQLDPMHDGHYVQLA 381
EA+ L + + D + T+L AC + G++I ++ ++ D + L
Sbjct: 173 EALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNS---SLV 229
Query: 382 GIYAKARKWEDVVRVRKLMIEKV 404
+YAK +R+ M+E++
Sbjct: 230 NVYAKCGD----LRMASYMLEQI 248
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 215/408 (52%), Gaps = 12/408 (2%)
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS--SVESFKRVFEEEEDTLCSDVVTW 108
L G +H +V+K G +D V +A+I +Y + G + S FE E +C
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC------ 321
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
N+ + G+ RNG + A ++F+ E+ +VVSW+++I G QNG + LE F M+
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEK 224
G++PN GR H + V VG+AL+DMYAKCG I
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 225 SRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSM 284
S+ +F + K++ WN ++ G + HG AK+ +++F + P ++F +L+AC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 285 GGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWA 344
GL EG +YF +M + YGI+P +EHY CMV+LL RAG + EA LI+ M EPD +W
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWG 561
Query: 345 TLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKV 404
LL++C++ VD+ E KL L+P + G YV L+ IYA W +V +R M
Sbjct: 562 ALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 405 SKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
KK G S ++++ ++ +AGDK H I ++ I + + +G+
Sbjct: 622 LKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/413 (19%), Positives = 144/413 (34%), Gaps = 113/413 (27%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
++SI ++S M + P+ H C + +A +G Q+H G D FV
Sbjct: 98 TQSIGVFSRMFSHG--LIPDSHVLPNLFKVCAELSAFKVGK--QIHCVSCVSGLDMDAFV 153
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+ ++ H+Y CG + DA KVFD M
Sbjct: 154 QGSMFHMYMRCG-----------------------------------RMGDARKVFDRMS 178
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR------------------------ 168
++DVV+ S ++ Y + G LE+ + S M GI
Sbjct: 179 DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVV 238
Query: 169 -----------PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYA 217
P++ GR +H + V +A++DMY
Sbjct: 239 MFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYG 298
Query: 218 KC-------------------------------GCIEKSRALFESISGK----DIWTWNV 242
K G ++K+ +FE + ++ +W
Sbjct: 299 KSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTS 358
Query: 243 MICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
+I G A +G +AL LF + G P +VT +L AC + G+ V +
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 303 GIQPEMEHYG-CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
+ + H G ++D+ A+ G ++ + ++ M + V W +L++ +HG
Sbjct: 419 LL--DNVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMHG 468
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 113/302 (37%), Gaps = 68/302 (22%)
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
DA+ V +P+ + S+S++I + L + FS M G+ P+
Sbjct: 66 FNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKV 125
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
+ G+ +H + V ++ MY +CG + +R +F+ +S KD+ T
Sbjct: 126 CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTC 185
Query: 241 NVMIC-----------------------------------GLASHGLAKDALALFHKFLS 265
+ ++C G G K+A+ +F K
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 266 EGFIPVNVTFVGVLNAC------SMGGLVS---------EGKRYFNLMVDCYGI------ 304
GF P VT VL + +MG L+ + K + M+D YG
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 305 ------QPEMEHYG---CMVDLLARAGLVDEAVHLIETM---TVEPDPVLWATLLDACKV 352
Q EM G + L+R GLVD+A+ + E T+E + V W +++ C
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 353 HG 354
+G
Sbjct: 366 NG 367
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
VKPN T L AC AA LG G H V++ +V V +ALI +Y +CG +
Sbjct: 384 VKPNHVTIPSMLPACGNIAA--LGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG-RIN 440
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP----ERDVVSWSTMIM 144
+ VF ++V WNS++ G +G+ ++ +F+ + + D +S+++++
Sbjct: 441 LSQIVFNMMP---TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 145 GYVQNGLLEDGLECFSVMREK-GIRP 169
Q GL ++G + F +M E+ GI+P
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKP 523
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 202/357 (56%), Gaps = 5/357 (1%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
+D+ N++I Y + G +E K +F+ DVVTW +++ G + G + A+ +
Sbjct: 250 KDLISWNSMIDGYVKHGR-IEDAKGLFDVMPR---RDVVTWATMIDGYAKLGFVHHAKTL 305
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXX 186
FD+MP RDVV++++M+ GYVQN + LE FS M +E + P++
Sbjct: 306 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR 365
Query: 187 XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICG 246
+H I +F + +G AL+DMY+KCG I+ + +FE I K I WN MI G
Sbjct: 366 LSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG 425
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
LA HGL + A + + P ++TFVGVLNACS GLV EG F LM + I+P
Sbjct: 426 LAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEP 485
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKL 366
++HYGCMVD+L+R+G ++ A +LIE M VEP+ V+W T L AC H + GE + L
Sbjct: 486 RLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHL 545
Query: 367 IQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHF 423
I + YV L+ +YA W+DV RVR +M E+ +K+ G S +EL+G +H F
Sbjct: 546 ILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 169/395 (42%), Gaps = 105/395 (26%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS--- 85
V ++ + + L AC++ + G+Q+H + K G D+F++N LI LY +CG
Sbjct: 117 VSVDKFSLSLVLKACSRLGF--VKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGL 174
Query: 86 SVESFKRVFEEEEDTLCS--------------------------DVVTWNSVLAGVVRNG 119
S + F R+ + + + S ++++WNS+++G +
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS 234
Query: 120 EIRD-AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
+ D A K+F +MPE+D++SW++MI GYV++G +ED F VM
Sbjct: 235 DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP--------------- 279
Query: 179 XXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIW 238
R V ++D YAK G + ++ LF+ + +D+
Sbjct: 280 ------------------------RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 315
Query: 239 TWNVMICGLASHGLAKDALALFHKFLSEG-FIPVNVTFVGVLNACSMGGLVSEG------ 291
+N M+ G + +AL +F E +P + T V VL A + G +S+
Sbjct: 316 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 375
Query: 292 ---KRYF----------NLMVDCYGIQPEM-----------EHYGCMVDLLARAGLVDEA 327
K+++ ++ C IQ M +H+ M+ LA GL + A
Sbjct: 376 IVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESA 435
Query: 328 VHL---IETMTVEPDPVLWATLLDACKVHGFVDMG 359
+ IE ++++PD + + +L+AC G V G
Sbjct: 436 FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
G +H ++ + + L+ +Y KCGC+ SR +F+ + +D ++N MI G
Sbjct: 140 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK 199
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
GL A LF +P+ + +++ SM ++ ++ + PE +
Sbjct: 200 CGLIVSARELF------DLMPMEMK--NLISWNSMISGYAQTSDGVDIASKLFADMPEKD 251
Query: 310 --HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
+ M+D + G +++A L + M D V WAT++D GFV + + +++
Sbjct: 252 LISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 368 QLD 370
D
Sbjct: 311 HRD 313
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 221/445 (49%), Gaps = 44/445 (9%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E++ ++S M +R+ V+PN+ T++ L A + S +VHA VVK + R
Sbjct: 375 NDGKEEAVDLFSEM--KRKGVRPNEFTYSVILTALPVISPS------EVHAQVVKTNYER 426
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
V AL+ Y V+ G++ +A KVF
Sbjct: 427 SSTVGTALLDAY-----------------------------------VKLGKVEEAAKVF 451
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX-XXXXXXX 187
+ ++D+V+WS M+ GY Q G E ++ F + + GI+PNE
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
G+ H + ++ V +AL+ MYAK G IE + +F+ KD+ +WN MI G
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
A HG A AL +F + VTF+GV AC+ GLV EG++YF++MV I P
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
Query: 308 MEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
EH CMVDL +RAG +++A+ +IE M +W T+L AC+VH ++G K+I
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Query: 368 QLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGD 427
+ P YV L+ +YA++ W++ +VRKLM E+ KK G+S +E++ + F+AGD
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGD 751
Query: 428 KDHDCSSDIYRMLETIGQGITAAGY 452
+ H IY LE + + GY
Sbjct: 752 RSHPLKDQIYMKLEDLSTRLKDLGY 776
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 172/379 (45%), Gaps = 58/379 (15%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI +A AN E++ ++ +M R +V+ ++ +F + C L Q+H
Sbjct: 266 MISGYA-ANGLDLEALGMFYSM--RLNYVRLSESSFASVIKLCAN--LKELRFTEQLHCS 320
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
VVK GF D +R AL+ Y +C + +++ R+F+E G V N
Sbjct: 321 VVKYGFLFDQNIRTALMVAYSKCTAMLDAL-RLFKE----------------IGCVGN-- 361
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
VVSW+ MI G++QN E+ ++ FS M+ KG+RPNE
Sbjct: 362 ---------------VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
E VH+ + + + VGTAL+D Y K G +E++ +F I KDI W
Sbjct: 407 LPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAW 462
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC-SMGGLVSEGKRYFNLMV 299
+ M+ G A G + A+ +F + G P TF +LN C + + +GK++
Sbjct: 463 SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG--- 519
Query: 300 DCYGIQPEMEHYGC----MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG- 354
+ I+ ++ C ++ + A+ G ++ A + + E D V W +++ HG
Sbjct: 520 --FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQ 576
Query: 355 ---FVDMGEKIGNKLIQLD 370
+D+ +++ + +++D
Sbjct: 577 AMKALDVFKEMKKRKVKMD 595
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G Q+H +K GF DV V +L+ Y
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTY--------------------------------- 138
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
++ +D KVFDEM ER+VV+W+T+I GY +N + ++ L F M+ +G +PN
Sbjct: 139 --MKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFT 196
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS 233
G VH+ + T+PV +L+++Y KCG + K+R LF+
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
K + TWN MI G A++GL +AL +F+ +F V+ C+
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCA 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 144/353 (40%), Gaps = 51/353 (14%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
NS E + ++ M + +PN TF AL + G G+QVH VVK G +
Sbjct: 172 NSMNDEVLTLFMRM--QNEGTQPNSFTFAAALGVLAEEGVGG--RGLQVHTVVVKNGLDK 227
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+ V N+LI+LY +CG+ +R A +F
Sbjct: 228 TIPVSNSLINLYLKCGN-----------------------------------VRKARILF 252
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
D+ + VV+W++MI GY NGL + L F MR +R +E
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISG-KDIWTWNVMICGL 247
+H ++ F + TAL+ Y+KC + + LF+ I ++ +W MI G
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
+ ++A+ LF + +G P T+ +L A ++S + + ++ Y
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSST 429
Query: 308 MEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
+ ++D + G V+EA + + + D V W+ +L G+ GE
Sbjct: 430 VGT--ALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAML-----AGYAQTGE 474
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 2/242 (0%)
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
G V + + +A +FD+ P RD S+ +++ G+ ++G ++ F + G+ +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS 233
GR +H F V VGT+LVD Y K + R +F+ +
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR 293
+++ TW +I G A + + + L LF + +EG P + TF L + G+ G +
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 294 YFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
++V G+ + +++L + G V +A L + V+ V W +++ +
Sbjct: 216 VHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAAN 273
Query: 354 GF 355
G
Sbjct: 274 GL 275
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 214/436 (49%), Gaps = 49/436 (11%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKL-------GFARDVFVRNALIHLYC 81
+KPN+ T L C A L G ++H + +K G + V N LI +Y
Sbjct: 361 IKPNEVTLISVLSGCASVGA--LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 82 ECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP--ERDVVSW 139
+C K+V DT A +FD + ERDVV+W
Sbjct: 419 KC-------KKV-----DT-----------------------ARAMFDSLSPKERDVVTW 443
Query: 140 STMIMGYVQNGLLEDGLECFSVMREKG--IRPNEXXXXXXXXXXXXXXXXECGRFVHS-T 196
+ MI GY Q+G LE S M E+ RPN G+ +H+
Sbjct: 444 TVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYA 503
Query: 197 IESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDA 256
+ + + + + V L+DMYAKCG I +R +F+++ K+ TW ++ G HG ++A
Sbjct: 504 LRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEA 563
Query: 257 LALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVD 316
L +F + GF VT + VL ACS G++ +G YFN M +G+ P EHY C+VD
Sbjct: 564 LGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVD 623
Query: 317 LLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGH 376
LL RAG ++ A+ LIE M +EP PV+W L C++HG V++GE K+ +L HDG
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGS 683
Query: 377 YVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDI 436
Y L+ +YA A +W+DV R+R LM K KK G S VE G F GDK H + +I
Sbjct: 684 YTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEI 743
Query: 437 YRMLETIGQGITAAGY 452
Y++L Q I GY
Sbjct: 744 YQVLLDHMQRIKDIGY 759
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 179/395 (45%), Gaps = 45/395 (11%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I +AK P ++ ++S M +P+ T L C LG Q+H
Sbjct: 199 IIESYAKLGKP-KVALEMFSRMTNEFG-CRPDNITLVNVLPPCASLGTHSLGK--QLHCF 254
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
V +++FV N L+ +Y +CG E+ VF + DVV+WN+++AG + G
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEA-NTVFS---NMSVKDVVSWNAMVAGYSQIGR 310
Query: 121 IRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
DA ++F++M E DVV+WS I GY Q GL + L M GI+PNE
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVP---------VGTALVDMYAKCGCIEKSRA 227
G+ +H ++K+ I + V L+DMYAKC ++ +RA
Sbjct: 371 VLSGCASVGALMHGKEIHCY--AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 228 LFESISGK--DIWTWNVMICGLASHGLAKDALALFHKFLSEG--FIPVNVTFVGVLNACS 283
+F+S+S K D+ TW VMI G + HG A AL L + E P T L AC+
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 284 MGGLVSEGKRYFNLMVDCYGIQPEMEHY-----GCMVDLLARAGLVDEAVHLIETMTVEP 338
+ GK+ + Y ++ + C++D+ A+ G + +A + + M +
Sbjct: 489 SLAALRIGKQ-----IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK- 542
Query: 339 DPVLWATLLDACKVHGF-------VDMGEKIGNKL 366
+ V W +L+ +HG+ D +IG KL
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 159/388 (40%), Gaps = 90/388 (23%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
P+ +TF F AC + S + G HA + GF +VFV NAL+ +Y C S
Sbjct: 125 PDNYTFPFVFKACGE--ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS----- 177
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
+ DA KVFDEM DVVSW+++I Y + G
Sbjct: 178 ------------------------------LSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 151 LLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
+ LE FS M E G RP+ G+ +H + + + VG
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHK------- 262
LVDMYAKCG ++++ +F ++S KD+ +WN M+ G + G +DA+ LF K
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 263 ----------------------------FLSEGFIPVNVTFVGVLNACSMGGLVSEGKRY 294
LS G P VT + VL+ C+ G + GK
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE- 386
Query: 295 FNLMVDCYGIQPEMEH-----------YGCMVDLLARAGLVDEAVHLIETMTV-EPDPVL 342
+ CY I+ ++ ++D+ A+ VD A + ++++ E D V
Sbjct: 387 ----IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 343 WATLLDACKVHGFVDMGEKIGNKLIQLD 370
W ++ HG + ++ +++ + D
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEED 470
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 130/310 (41%), Gaps = 48/310 (15%)
Query: 111 VLAGVVRNGEIRDAEKVFDEMPERD--VVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
+++ + G + A + P D V W+++I Y NG L F +M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
P+ CG H+ F V VG ALV MY++C + +R +
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 229 FESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSE-GFIPVNVTFVGVLNACSMGGL 287
F+ +S D+ +WN +I A G K AL +F + +E G P N+T V VL C+ G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHY----GCMVDLLARAGLVDEAVHLIETMTVEPDPVLW 343
S GK+ + C+ + EM C+VD+ A+ G++DEA + M+V+ D V W
Sbjct: 245 HSLGKQ-----LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSW 298
Query: 344 ATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRV-RKLMIE 402
+ +AG Y++ ++ED VR+ K+ E
Sbjct: 299 NAM---------------------------------VAG-YSQIGRFEDAVRLFEKMQEE 324
Query: 403 KVSKKVAGWS 412
K+ V WS
Sbjct: 325 KIKMDVVTWS 334
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 16/171 (9%)
Query: 5 HAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVK- 63
H AN +++ + S M +PN T + AL AC AA L G Q+HA+ ++
Sbjct: 453 HGDAN----KALELLSEMFEEDCQTRPNAFTISCALVACASLAA--LRIGKQIHAYALRN 506
Query: 64 LGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRD 123
A +FV N LI +Y +CGS + + VF+ + + + VTW S++ G +G +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGS-ISDARLVFD---NMMAKNEVTWTSLMTGYGMHGYGEE 562
Query: 124 AEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREK-GIRP 169
A +FDEM + D V+ ++ +G+++ G+E F+ M+ G+ P
Sbjct: 563 ALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 230/453 (50%), Gaps = 41/453 (9%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I HA++N P +++ + + + + P+ T L AC+K + LG +VH
Sbjct: 467 LIGGHAQSNDP---RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK--EVHGF 521
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+++ RD+FV +++ LY CG LC+
Sbjct: 522 IIRNWLERDLFVYLSVLSLYIHCGE---------------LCT----------------- 549
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ +FD M ++ +VSW+T+I GY+QNG + L F M GI+
Sbjct: 550 ---VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
GR H+ + +L+DMYAK G I +S +F + K +W
Sbjct: 607 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 666
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N MI G HGLAK+A+ LF + G P ++TF+GVL AC+ GL+ EG RY + M
Sbjct: 667 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 726
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLI-ETMTVEPDPVLWATLLDACKVHGFVDMG 359
+G++P ++HY C++D+L RAG +D+A+ ++ E M+ E D +W +LL +C++H ++MG
Sbjct: 727 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG 786
Query: 360 EKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGG 419
EK+ KL +L+P +YV L+ +YA KWEDV +VR+ M E +K AG S +EL
Sbjct: 787 EKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRK 846
Query: 420 IHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
+ FV G++ D +I + + I+ GY
Sbjct: 847 VFSFVVGERFLDGFEEIKSLWSILEMKISKMGY 879
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 108/255 (42%), Gaps = 42/255 (16%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
P+ T+ + AC S +G G+ VH VVK G DVFV NAL+ Y
Sbjct: 185 PDHFTYPCVIKACA--GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGT-------- 234
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
+G + DA ++FD MPER++VSW++MI + NG
Sbjct: 235 ---------------------------HGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 151 LLEDGLECFSVMREK----GIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITV 206
E+ M E+ P+ G+ VH L+ +
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 207 PVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSE 266
+ AL+DMY+KCGCI ++ +F+ + K++ +WN M+ G ++ G + + L+
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 267 GFIPVNVTFVGVLNA 281
G V V +LNA
Sbjct: 388 G-EDVKADEVTILNA 401
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 130/332 (39%), Gaps = 47/332 (14%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
P+ T L C + GLG GV H VKL +++ + NAL+ +Y +CG
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGV--HGWAVKLRLDKELVLNNALMDMYSKCGC----- 342
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
I +A+ +F ++VVSW+TM+ G+ G
Sbjct: 343 ------------------------------ITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 151 LLEDGLECFSVMRE-----KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
D F V+R+ + ++ +E + +H +F
Sbjct: 373 ---DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
V A V YAKCG + ++ +F I K + +WN +I G A + +L +
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
G +P + T +L+ACS + GK ++ + ++ ++ Y ++ L G +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGELC 548
Query: 326 EAVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
L + M + V W T++ +GF D
Sbjct: 549 TVQALFDAME-DKSLVSWNTVITGYLQNGFPD 579
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 13/262 (4%)
Query: 98 EDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLE 157
+D LC+ ++T ++ G D+ VFD + +++ W+ +I Y +N L ++ LE
Sbjct: 119 DDVLCTRIITMYAMC------GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172
Query: 158 CF-SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMY 216
F ++ + P+ G VH + V VG ALV Y
Sbjct: 173 TFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY 232
Query: 217 AKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSE----GFIPVN 272
G + + LF+ + +++ +WN MI + +G ++++ L + + E F+P
Sbjct: 233 GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV 292
Query: 273 VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIE 332
T V VL C+ + GK V + E+ ++D+ ++ G + A +I
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLR-LDKELVLNNALMDMYSKCGCITNA-QMIF 350
Query: 333 TMTVEPDPVLWATLLDACKVHG 354
M + V W T++ G
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEG 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 188 ECGRFVHSTIE-SLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICG 246
E GR +H + S + R + T ++ MYA CG + SR +F+++ K+++ WN +I
Sbjct: 101 EMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISS 160
Query: 247 LASHGLAKDALALFHKFLS-EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
+ + L + L F + +S +P + T+ V+ AC+ V G L+V G+
Sbjct: 161 YSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLV 219
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
++ +V G V +A+ L + M E + V W +++ +GF
Sbjct: 220 EDVFVGNALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMIRVFSDNGF 268
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 236/438 (53%), Gaps = 20/438 (4%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
RR+ V+ + + C K LG Q H VK+G V V NAL+ +Y +CG
Sbjct: 103 RRKRVEIDDVSVVCLFGVCAK--LEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCG 160
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIM 144
V KR+FEE E+ VV+W VL VV+ + +VF EMPER+ V+W+ M+
Sbjct: 161 L-VSEVKRIFEELEE---KSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVA 216
Query: 145 GYVQNGLLEDGLECFSVMREK-GIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFR 203
GY+ G + LE + M + G N GR+VH + +LK
Sbjct: 217 GYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVH--VYALKKE 274
Query: 204 IT---------VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAK 254
+ V VGTALVDMYAKCG I+ S +F + +++ TWN + GLA HG +
Sbjct: 275 MMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGR 334
Query: 255 DALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCM 314
+ +F + + E P ++TF VL+ACS G+V EG R F+ + YG++P+++HY CM
Sbjct: 335 MVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACM 392
Query: 315 VDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD 374
VDLL RAGL++EA L+ M V P+ V+ +LL +C VHG V++ E+I +LIQ+ P +
Sbjct: 393 VDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNT 452
Query: 375 GHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSS 434
+ + ++ +Y + + +R + ++ +K+ G S + + +H F +GD+ H +
Sbjct: 453 EYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTK 512
Query: 435 DIYRMLETIGQGITAAGY 452
+IY L + + I +AGY
Sbjct: 513 EIYLKLNEVIERIRSAGY 530
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 121/291 (41%), Gaps = 51/291 (17%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMP--ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG 166
N++ +GE+ A+K+FDE+P E+D V W+T++ + + GLL + ++ F MR K
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 167 IRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSR 226
+ ++ + H + +V V AL+DMY KCG + + +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 227 ALFESISGKDI--WT-----------------------------WNVMICGLASHGLAKD 255
+FE + K + WT W VM+ G G ++
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 256 ALALFHKFLSEGFIPVN-VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM-----E 309
L L + + +N VT +L+AC+ G + G+ V Y ++ EM
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR-----WVHVYALKKEMMMGEEA 281
Query: 310 HYG------CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
Y +VD+ A+ G +D ++++ M + + V W L +HG
Sbjct: 282 SYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHG 331
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/342 (37%), Positives = 198/342 (57%), Gaps = 8/342 (2%)
Query: 103 SDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM 162
SDV +S++ +GE+ +A KVF+EMPER+VVSW+ MI G+ Q ++ L+ +S M
Sbjct: 153 SDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKM 212
Query: 163 REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI 222
R+ PN+ GR VH + + + + +L+ MY KCG +
Sbjct: 213 RKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDL 272
Query: 223 EKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSE-GFIPVNVTFVGVLNA 281
+ + +F+ S KD+ +WN MI G A HGLA A+ LF + + G P +T++GVL++
Sbjct: 273 KDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 282 CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPV 341
C GLV EG+++FNLM + +G++PE+ HY C+VDLL R GL+ EA+ LIE M ++P+ V
Sbjct: 333 CRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 342 LWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMI 401
+W +LL +C+VHG V G + + + L+P +VQLA +YA W++ VRKLM
Sbjct: 392 IWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMK 451
Query: 402 EKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETI 443
+K K G S +E+ + F A D +C RMLE +
Sbjct: 452 DKGLKTNPGCSWIEINNYVFMFKAEDGS-NC-----RMLEIV 487
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 90/159 (56%), Gaps = 13/159 (8%)
Query: 16 IAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNA 75
+ +YS M R+ PN +TFT L ACT A LG G VH + +G + + N+
Sbjct: 206 LKLYSKM--RKSTSDPNDYTFTALLSACTGSGA--LGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 76 LIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER- 134
LI +YC+CG ++F R+F++ + DVV+WNS++AG ++G A ++F+ M +
Sbjct: 262 LISMYCKCGDLKDAF-RIFDQFSNK---DVVSWNSMIAGYAQHGLAMQAIELFELMMPKS 317
Query: 135 ----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRP 169
D +++ ++ GL+++G + F++M E G++P
Sbjct: 318 GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 211/410 (51%), Gaps = 39/410 (9%)
Query: 47 AASGLGS---GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCS 103
++GL S G Q+H + +K G D+ V ++L H+Y
Sbjct: 100 GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY----------------------- 136
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
+RNG+++D E V MP R++V+W+T+IMG QNG E L + +M+
Sbjct: 137 ------------MRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 184
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
G RPN+ G+ +H+ + V V ++L+ MY+KCGC+
Sbjct: 185 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 244
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN-VTFVGVLNAC 282
+ F +D W+ MI HG +A+ LF+ + + +N V F+ +L AC
Sbjct: 245 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 304
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL 342
S GL +G F++MV+ YG +P ++HY C+VDLL RAG +D+A +I +M ++ D V+
Sbjct: 305 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVI 364
Query: 343 WATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIE 402
W TLL AC +H +M +++ +++Q+DP YV LA ++A A++W DV VRK M +
Sbjct: 365 WKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRD 424
Query: 403 KVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
K KK AG S E +G +H F GD+ S +IY L+ + + GY
Sbjct: 425 KNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGY 474
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 2/282 (0%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
+ ++ N ++ G VR G++ +A KVFDEMP+R + +W+ MI G +Q E+GL F M
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
G P+E G+ +H + + V ++L MY + G ++
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
+ S+ +++ WN +I G A +G + L L+ G P +TFV VL++CS
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 284 MGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLW 343
+ +G++ + G + ++ + ++ G + +A E D V+W
Sbjct: 204 DLAIRGQGQQIHAEAIKI-GASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE-DEVMW 261
Query: 344 ATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYA 385
++++ A HG D ++ N + + M L +YA
Sbjct: 262 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 50/264 (18%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N P + +Y M + +PN+ TF L +C+ A G G Q+HA +K+G +
Sbjct: 170 NGCPETVLYLYKMM--KISGCRPNKITFVTVLSSCSDLAIRG--QGQQIHAEAIKIGASS 225
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
V V ++LI +Y +CG ++ K F E ED D V W+S+++ +G+ +A ++F
Sbjct: 226 VVAVVSSLISMYSKCGCLGDAAK-AFSERED---EDEVMWSSMISAYGFHGQGDEAIELF 281
Query: 129 DEMPER-----DVVSWSTMIMGYVQNGLLEDGLECFSVMREK-GIRPNEXXXXXXXXXXX 182
+ M E+ + V++ ++ +GL + GLE F +M EK G +P
Sbjct: 282 NTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP------------- 328
Query: 183 XXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK-DIWTWN 241
LK T +VD+ + GC++++ A+ S+ K DI W
Sbjct: 329 ----------------GLKHY------TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWK 366
Query: 242 VMICGLASHGLAKDALALFHKFLS 265
++ H A+ A +F + L
Sbjct: 367 TLLSACNIHKNAEMAQRVFKEILQ 390
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 216/439 (49%), Gaps = 39/439 (8%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
+++ + ML R ++ ++ T A+ AC A L G Q+HA GF+ D+ +
Sbjct: 574 KALTTFRQMLDRG--IRSDEVGLTNAVSACAGLQA--LKEGQQIHAQACVSGFSSDLPFQ 629
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
NAL+ LY CG +I ++ F++
Sbjct: 630 NALVTLYSRCG-----------------------------------KIEESYLAFEQTEA 654
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
D ++W+ ++ G+ Q+G E+ L F M +GI N + G+ V
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H+ I + V AL+ MYAKCG I + F +S K+ +WN +I + HG
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 774
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
+AL F + + P +VT VGVL+ACS GLV +G YF M YG+ P+ EHY C
Sbjct: 775 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVC 834
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMH 373
+VD+L RAGL+ A I+ M ++PD ++W TLL AC VH +++GE + L++L+P
Sbjct: 835 VVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPED 894
Query: 374 DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCS 433
YV L+ +YA ++KW+ R+ M EK KK G S +E++ IH F GD++H +
Sbjct: 895 SATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLA 954
Query: 434 SDIYRMLETIGQGITAAGY 452
+I+ + + + + GY
Sbjct: 955 DEIHEYFQDLTKRASEIGY 973
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 162/394 (41%), Gaps = 72/394 (18%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG---- 84
++P+ +T + AC+ A L G Q+HA+ KLGFA + + AL++LY +C
Sbjct: 385 LEPDSNTLASLVVACS--ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 85 -------SSVE--------------------SFKRVFEEEEDTLCSDVVTWNSVLAGVVR 117
+ VE SF+ + + + + + T+ S+L +R
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 118 NGEIRDAEKVFDEMPE-----------------------------------RDVVSWSTM 142
G++ E++ ++ + +DVVSW+TM
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF 202
I GY Q + L F M ++GIR +E + G+ +H+ F
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 203 RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHK 262
+P ALV +Y++CG IE+S FE D WN ++ G G ++AL +F +
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682
Query: 263 FLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAG 322
EG N TF + A S + +GK+ ++ G E E ++ + A+ G
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCG 741
Query: 323 LVDEA-VHLIETMTVEPDPVLWATLLDACKVHGF 355
+ +A +E T + V W +++A HGF
Sbjct: 742 SISDAEKQFLEVST--KNEVSWNAIINAYSKHGF 773
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 156/395 (39%), Gaps = 76/395 (19%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLY-------- 80
+ P + F+ L AC K L G Q+H V+KLGF+ D +V NAL+ LY
Sbjct: 284 IMPTPYAFSSVLSACKK--IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 341
Query: 81 -----------------------CECG---SSVESFKRV----FEEEEDTLCSDVVT--- 107
+CG ++E FKR+ E + +TL S VV
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 401
Query: 108 --------------------WNSVLAGVVRN-----GEIRDAEKVFDEMPERDVVSWSTM 142
N+ + G + N +I A F E +VV W+ M
Sbjct: 402 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 461
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIR---PNEXXXXXXXXXXXXXXXXECGRFVHSTIES 199
++ Y GLL+D F + R+ I PN+ E G +HS I
Sbjct: 462 LVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 200 LKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALAL 259
F++ V + L+DMYAK G ++ + + +GKD+ +W MI G + AL
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 260 FHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLA 319
F + L G V ++AC+ + EG++ + G ++ +V L +
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYS 637
Query: 320 RAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
R G ++E+ +L T D + W L+ + G
Sbjct: 638 RCGKIEES-YLAFEQTEAGDNIAWNALVSGFQQSG 671
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 167/422 (39%), Gaps = 74/422 (17%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V PN+ TF+ L AC + + Q+HA ++ G V N LI LY
Sbjct: 182 VTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYS------- 233
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
RNG + A +VFD + +D SW MI G +
Sbjct: 234 ----------------------------RNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
N + + F M GI P E G +H + L F V
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
ALV +Y G + + +F ++S +D T+N +I GL+ G + A+ LF + +G
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKR-------------------YFNLMVDC-------- 301
P + T ++ ACS G + G++ NL C
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 302 YGIQPEMEHYGCMVDLLARAGLVDE---AVHLIETMTVE---PDPVLWATLLDACKVHGF 355
Y ++ E+E+ +L GL+D+ + + M +E P+ + ++L C G
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 356 VDMGEKIGNKLIQLDPMHDGHYVQ-LAGIYAKARK----WEDVVRVRKLMIEKVSKKVAG 410
+++GE+I +++I+ + + + L +YAK K W+ ++R + + +AG
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 411 WS 412
++
Sbjct: 566 YT 567
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 183/470 (38%), Gaps = 80/470 (17%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
R ++PN T + L C K S L G ++H+ ++KLG + + L Y
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGS-LDEGRKLHSQILKLGLDSNGCLSEKLFDFYL---- 131
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
FK G++ A KVFDEMPER + +W+ MI
Sbjct: 132 ----FK---------------------------GDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX-XXXXXXXECGRFVHSTIESLKFRI 204
L+ + F M + + PNE + +H+ I R
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL 264
+ V L+D+Y++ G ++ +R +F+ + KD +W MI GL+ + +A+ LF
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 265 SEGFIPVNVTFVGVLNAC----------SMGGLV-----SEGKRYFNLMVDCY---GIQP 306
G +P F VL+AC + GLV S N +V Y G
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 307 EMEH------------YGCMVDLLARAGLVDEAVHLIETM---TVEPDPVLWATLLDACK 351
EH Y +++ L++ G ++A+ L + M +EPD A+L+ AC
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 352 VHGFVDMGEKIGNKLIQLDPMHDGHYV-QLAGIYAKARKWEDVVRVRKLMIEKVSKKVAG 410
G + G+++ +L + L +YAK D+ +E + V
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC---ADIETALDYFLETEVENVVL 457
Query: 411 WSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGYPSVHLTCV 460
W+++ + G+ D S I+R ++ YPS+ TC+
Sbjct: 458 WNVMLVAYGLL------DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 162 MREKGIRPN-EXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCG 220
+ +GIRPN + + GR +HS I L + L D Y G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 221 CIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLN 280
+ + +F+ + + I+TWN MI LAS L + LF + +SE P TF GVL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 281 ACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD--------------- 325
AC G + + + + G++ ++DL +R G VD
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 326 ----------------EAVHLIETMTV---EPDPVLWATLLDACKVHGFVDMGEKIGNKL 366
EA+ L M V P P ++++L ACK +++GE++ +
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 367 IQL 369
++L
Sbjct: 315 LKL 317
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 207/406 (50%), Gaps = 36/406 (8%)
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNS 110
L +QVH+ +V+ GF +V ALI++Y +CG
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCG-------------------------- 286
Query: 111 VLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN 170
++ A++VFD+ +++ +T++ Y Q+ E+ L FS M K + PN
Sbjct: 287 ---------KVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337
Query: 171 EXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFE 230
E + G +H + +R V VG ALV+MYAK G IE +R F
Sbjct: 338 EYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFS 397
Query: 231 SISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSE 290
++ +DI TWN MI G + HGL ++AL F + + G IP +TF+GVL ACS G V +
Sbjct: 398 GMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQ 457
Query: 291 GKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDAC 350
G YFN ++ + +QP+++HY C+V LL++AG+ +A + T +E D V W TLL+AC
Sbjct: 458 GLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNAC 517
Query: 351 KVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAG 410
V +G+K+ I+ P G YV L+ I+AK+R+WE V +VR LM + KK G
Sbjct: 518 YVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPG 577
Query: 411 WSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY-PSV 455
S + + H F+A D H + IY ++ + I GY P V
Sbjct: 578 VSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDV 623
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 124/306 (40%), Gaps = 41/306 (13%)
Query: 48 ASGLGSGVQVHAHVV---KLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSD 104
+S L G +HAH++ + A D + N+LI+LY +C +V
Sbjct: 44 SSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR---------------- 87
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
A K+FD MPER+VVSW M+ GY +G + L+ F M
Sbjct: 88 -------------------ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFF 128
Query: 165 KG-IRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
G RPNE E G+ H V LV MY+ C
Sbjct: 129 SGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNG 188
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
++ + + + D+ ++ + G G K+ L + K +E F+ N+T++ L S
Sbjct: 189 EAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFS 248
Query: 284 MGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLW 343
++ + + MV +G E+E G ++++ + G V A + + T + L
Sbjct: 249 NLRDLNLALQVHSRMVR-FGFNAEVEACGALINMYGKCGKVLYAQRVFDD-THAQNIFLN 306
Query: 344 ATLLDA 349
T++DA
Sbjct: 307 TTIMDA 312
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 86/162 (53%), Gaps = 13/162 (8%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ ++S M + V PN++TF L++ + S L G +H V+K G+ V V
Sbjct: 321 EALNLFSKMDTKE--VPPNEYTFAILLNSIAE--LSLLKQGDLLHGLVLKSGYRNHVMVG 376
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
NAL+++Y + G S+E ++ F D+VTWN++++G +G R+A + FD M
Sbjct: 377 NALVNMYAKSG-SIEDARKAF---SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIF 432
Query: 134 RDVVSWSTMIMGYVQN----GLLEDGLECFS-VMREKGIRPN 170
+ +G +Q G +E GL F+ +M++ ++P+
Sbjct: 433 TGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 211/426 (49%), Gaps = 38/426 (8%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVES 89
+PN+ TF + AC + G +H V+K G +V V NA I+ Y
Sbjct: 131 RPNEVTFLSMISACVYGGSKE--EGRCIHGLVMKFGVLEEVKVVNAFINWYG-------- 180
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN 149
+ G++ + K+F+++ +++VSW+TMI+ ++QN
Sbjct: 181 ---------------------------KTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
GL E GL F++ R G P++ + +H I F +
Sbjct: 214 GLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT 273
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
TAL+D+Y+K G +E S +F I+ D W M+ A+HG +DA+ F + G
Sbjct: 274 TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGIS 333
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
P +VTF +LNACS GLV EGK YF M Y I P ++HY CMVDLL R+GL+ +A
Sbjct: 334 PDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYG 393
Query: 330 LIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARK 389
LI+ M +EP +W LL AC+V+ +G K +L +L+P +YV L+ IY+ +
Sbjct: 394 LIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGL 453
Query: 390 WEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITA 449
W+D R+R LM +K + +G S +E IH FV GD H S I + L+ I + + +
Sbjct: 454 WKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKS 513
Query: 450 A-GYPS 454
GY S
Sbjct: 514 EMGYKS 519
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 144/342 (42%), Gaps = 47/342 (13%)
Query: 22 MLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQV------HAHVVKLGFARDVFVRNA 75
L RRRF+ +Q +F +L A + + S V + H VVK R F+ +
Sbjct: 14 FLYRRRFL--SQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQ 71
Query: 76 LIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERD 135
L+ Y G V C AEK+FDEMPERD
Sbjct: 72 LVGCYLRLGHDV--------------C---------------------AEKLFDEMPERD 96
Query: 136 VVSWSTMIMGYVQNGLLEDGLECFSVM--REKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+VSW+++I GY G L E S M E G RPNE E GR +
Sbjct: 97 LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI 156
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H + V V A ++ Y K G + S LFE +S K++ +WN MI +GLA
Sbjct: 157 HGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLA 216
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
+ LA F+ G P TF+ VL +C G+V + L++ G
Sbjct: 217 EKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM-FGGFSGNKCITTA 275
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
++DL ++ G ++++ + +T PD + W +L A HGF
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHGF 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 188 ECGRFVH-STIESLKFRITVPVGTALVDMYAKCG---CIEKSRALFESISGKDIWTWNVM 243
E R +H ++S+ +R +G LV Y + G C EK LF+ + +D+ +WN +
Sbjct: 48 ELCRLLHCKVVKSVSYRHGF-IGDQLVGCYLRLGHDVCAEK---LFDEMPERDLVSWNSL 103
Query: 244 ICGLASHG-LAKDALALFHKFLSE-GFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC 301
I G + G L K L +SE GF P VTF+ +++AC GG EG+ L++
Sbjct: 104 ISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK- 162
Query: 302 YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEK 361
+G+ E++ ++ + G + + L E ++++ + V W T++ +G + G
Sbjct: 163 FGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMIVIHLQNGLAEKGLA 221
Query: 362 IGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVR 397
N ++ GH A A R ED+ VR
Sbjct: 222 YFNMSRRV-----GHEPDQATFLAVLRSCEDMGVVR 252
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 213/430 (49%), Gaps = 42/430 (9%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
++ +Y MLR KP+ TF +C + L G +H+H + LG +D+
Sbjct: 239 DAFGLYCLMLREE--FKPDLSTFINLAASC--QNPETLTQGRLIHSHAIHLGTDQDIEAI 294
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N I +Y + EDT CS A +FD M
Sbjct: 295 NTFISMY--------------SKSEDT-CS--------------------ARLLFDIMTS 319
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
R VSW+ MI GY + G +++ L F M + G +P+ E G+++
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 379
Query: 194 --HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+ I K R V + AL+DMY+KCG I ++R +F++ K + TW MI G A +G
Sbjct: 380 DARADIYGCK-RDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 438
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
+ +AL LF K + + P ++TF+ VL AC+ G + +G YF++M Y I P ++HY
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY 498
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDP 371
CMVDLL R G ++EA+ LI M+ +PD +W LL+ACK+H V + E+ L L+P
Sbjct: 499 SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEP 558
Query: 372 MHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHD 431
YV++A IYA A W+ R+R +M ++ KK G S++++ G H F G+ H
Sbjct: 559 QMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHV 618
Query: 432 CSSDIYRMLE 441
+ IY L
Sbjct: 619 ENEVIYFTLN 628
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 149/386 (38%), Gaps = 74/386 (19%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P ES+ ++ M +R +PN TF F AC + A +G VHAH++K F DVF
Sbjct: 33 PVESLLLFREM--KRGGFEPNNFTFPFVAKACARLA--DVGCCEMVHAHLIKSPFWSDVF 88
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V A + ++ +C S + A KVF+ M
Sbjct: 89 VGTATVDMFVKCNS-----------------------------------VDYAAKVFERM 113
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
PERD +W+ M+ G+ Q+G + F MR I P+ +
Sbjct: 114 PERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLE 173
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD--IWTWNVMICGLAS 249
+H+ L + V V + Y KCG ++ ++ +FE+I D + +WN M +
Sbjct: 174 AMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSV 233
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK---------------RY 294
G A DA L+ L E F P TF+ + +C +++G+
Sbjct: 234 FGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEA 293
Query: 295 FNLMVDCYGIQPE----------MEHYGC-----MVDLLARAGLVDEAVHLIETMTV--- 336
N + Y + M C M+ A G +DEA+ L M
Sbjct: 294 INTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE 353
Query: 337 EPDPVLWATLLDACKVHGFVDMGEKI 362
+PD V +L+ C G ++ G+ I
Sbjct: 354 KPDLVTLLSLISGCGKFGSLETGKWI 379
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 61/149 (40%)
Query: 136 VVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHS 195
V +W+ I V + L F M+ G PN C VH+
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 196 TIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKD 255
+ F V VGTA VDM+ KC ++ + +FE + +D TWN M+ G G
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 256 ALALFHKFLSEGFIPVNVTFVGVLNACSM 284
A +LF + P +VT + ++ + S
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSASF 165
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/442 (33%), Positives = 211/442 (47%), Gaps = 42/442 (9%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGS-GVQVHAHVVKLGFARDV 70
P +++ ++ MLR PN+ T + + A AA G G Q+H VK GF +V
Sbjct: 142 PCDALLFFNQMLRFG--YSPNEFTLSSVIKAA---AAERRGCCGHQLHGFCVKCGFDSNV 196
Query: 71 FVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDE 130
V +AL+ LY R G + DA+ VFD
Sbjct: 197 HVGSALLDLY-----------------------------------TRYGLMDDAQLVFDA 221
Query: 131 MPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECG 190
+ R+ VSW+ +I G+ + E LE F M G RP+ E G
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASH 250
++VH+ + ++ G L+DMYAK G I +R +F+ ++ +D+ +WN ++ A H
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH 310
G K+A+ F + G P ++F+ VL ACS GL+ EG Y+ LM GI PE H
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWH 400
Query: 311 YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLD 370
Y +VDLL RAG ++ A+ IE M +EP +W LL+AC++H ++G + +LD
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELD 460
Query: 371 PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDH 430
P G +V L IYA +W D RVRK M E KK S VE+E IH FVA D+ H
Sbjct: 461 PDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERH 520
Query: 431 DCSSDIYRMLETIGQGITAAGY 452
+I R E + I GY
Sbjct: 521 PQREEIARKWEEVLAKIKELGY 542
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 149/328 (45%), Gaps = 39/328 (11%)
Query: 28 FVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSV 87
++ ++ + L CT L G VHAH+++ F D+ + N L+++Y +C
Sbjct: 55 YIPADRRFYNTLLKKCT--VFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC---- 108
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYV 147
G + +A KVF++MP+RD V+W+T+I GY
Sbjct: 109 -------------------------------GSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
Q+ D L F+ M G PNE CG +H F V
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
VG+AL+D+Y + G ++ ++ +F+++ ++ +WN +I G A + AL LF L +G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
F P + ++ + ACS G + +GK M+ G + ++D+ A++G + +A
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 328 VHLIETMTVEPDPVLWATLLDACKVHGF 355
+ + + + D V W +LL A HGF
Sbjct: 317 RKIFDRLA-KRDVVSWNSLLTAYAQHGF 343
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 210/424 (49%), Gaps = 31/424 (7%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
N T + AC + A +H VVK G RD FV+N L+ +Y G ++
Sbjct: 404 NSTTMAGVVPACVRSGA--FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG-KIDIAM 460
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP--ERDVVSWSTMIMGYVQN 149
R+F + ED D+VTWN+++ G V + DA + +M ER V ++ +
Sbjct: 461 RIFGKMED---RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV------ 511
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
++PN G+ +H+ V VG
Sbjct: 512 ----------------SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
+ALVDMYAKCGC++ SR +F+ I K++ TWNV+I HG ++A+ L + +G
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
P VTF+ V ACS G+V EG R F +M YG++P +HY C+VDLL RAG + EA
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675
Query: 330 LIETMTVEPDPV-LWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKAR 388
L+ M + + W++LL A ++H +++GE LIQL+P HYV LA IY+ A
Sbjct: 676 LMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 735
Query: 389 KWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGIT 448
W+ VR+ M E+ +K G S +E +H FVAGD H S + LET+ + +
Sbjct: 736 LWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
Query: 449 AAGY 452
GY
Sbjct: 796 KEGY 799
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 176/448 (39%), Gaps = 98/448 (21%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLG-FARDVFVRNALIHLYCECGSSV 87
V+P++ T + L AC+ L +G ++HA+ +K G + FV +AL+ +YC C
Sbjct: 298 VEPDEFTISSVLPACSHLEM--LRTGKELHAYALKNGSLDENSFVGSALVDMYCNC---- 351
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYV 147
VL+G +VFD M +R + W+ MI GY
Sbjct: 352 ---------------------KQVLSG----------RRVFDGMFDRKIGLWNAMIAGYS 380
Query: 148 QNGLLEDGLECFSVMREK-GIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITV 206
QN ++ L F M E G+ N +H +
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 207 PVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKF--- 263
V L+DMY++ G I+ + +F + +D+ TWN MI G +DAL L HK
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 264 ---LSEG-----FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY---- 311
+S+G P ++T + +L +C+ +++GK + Y I+ +
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-----IHAYAIKNNLATDVAVG 555
Query: 312 GCMVDLLARAGLV-------------------------------DEAVHLIETMTVE--- 337
+VD+ A+ G + EA+ L+ M V+
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 338 PDPVLWATLLDACKVHGFVDMGEKIGNKL---IQLDPMHDGHYVQLAGIYAKARKWEDVV 394
P+ V + ++ AC G VD G +I + ++P D HY + + +A + ++
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD-HYACVVDLLGRAGRIKEAY 674
Query: 395 RVRKLMIEKVSKKVAGWSLVELEGGIHH 422
++ +M + K WS + IH+
Sbjct: 675 QLMNMMPRDFN-KAGAWSSLLGASRIHN 701
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 108/268 (40%), Gaps = 42/268 (15%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARD-VFVRNALIHLYCECGSSV 87
+KP+ + F L A LG Q+HAHV K G+ D V V N L++LY +CG
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGK--QIHAHVYKFGYGVDSVTVANTLVNLYRKCGD-- 148
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYV 147
F V+ KVFD + ER+ VSW+++I
Sbjct: 149 --FGAVY-------------------------------KVFDRISERNQVSWNSLISSLC 175
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE---CGRFVHSTIESLKFRI 204
E LE F M ++ + P+ E G+ VH+ K +
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA-YGLRKGEL 234
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL 264
+ LV MY K G + S+ L S G+D+ TWN ++ L + +AL + +
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 265 SEGFIPVNVTFVGVLNACSMGGLVSEGK 292
EG P T VL ACS ++ GK
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGK 322
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 41/322 (12%)
Query: 29 VKPNQHTFTFALHACTKRA-ASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSV 87
V+P+ T + AC+ GL G QVHA+ ++ G + F+ N L+ +Y + G
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLA 253
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYV 147
S VL G RD+V+W+T++
Sbjct: 254 SS--------------------KVLLG---------------SFGGRDLVTWNTVLSSLC 278
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHS-TIESLKFRITV 206
QN L + LE M +G+ P+E G+ +H+ +++
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 207 PVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKF-LS 265
VG+ALVDMY C + R +F+ + + I WN MI G + + K+AL LF S
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
G + + T GV+ AC G S + +V G+ + ++D+ +R G +D
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RGLDRDRFVQNTLMDMYSRLGKID 457
Query: 326 EAVHLIETMTVEPDPVLWATLL 347
A+ + M + D V W T++
Sbjct: 458 IAMRIFGKME-DRDLVTWNTMI 478
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 203/401 (50%), Gaps = 39/401 (9%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+I ++S ML P++ T L C+ + L G ++H + ++ G + + +
Sbjct: 534 EAIGLFSEMLDDG--TSPDESTLAAVLTVCSSHPS--LPRGKEIHGYTLRAGIDKGMDLG 589
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
+AL+++Y +CGS ++ A +V+D +PE
Sbjct: 590 SALVNMYSKCGS-----------------------------------LKLARQVYDRLPE 614
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
D VS S++I GY Q+GL++DG F M G + G V
Sbjct: 615 LDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQV 674
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H+ I + VG++L+ MY+K G I+ F I+G D+ W +I A HG A
Sbjct: 675 HAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKA 734
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
+AL +++ +GF P VTFVGVL+ACS GGLV E + N MV YGI+PE HY C
Sbjct: 735 NEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVC 794
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMH 373
MVD L R+G + EA I M ++PD ++W TLL ACK+HG V++G+ K I+L+P
Sbjct: 795 MVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSD 854
Query: 374 DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLV 414
G Y+ L+ I A+ +W++V RKLM +K GWS V
Sbjct: 855 AGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 154/359 (42%), Gaps = 44/359 (12%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
M+ + K+N S ++ I+ M R V+ N T T + AC + S + QVHA
Sbjct: 322 MLSGYTKSNDAFS-ALEIFKEM--RHSGVEINNCTVTSVISACGR--PSMVCEASQVHAW 376
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
V K GF D V ALI +Y + G ++ ++VFE+
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGD-IDLSEQVFED------------------------ 411
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
D++ +++V+ MI + Q+ + F+ M ++G+R +E
Sbjct: 412 -------LDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV 462
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
G+ VH + + VG++L +Y+KCG +E+S LF+ I KD W
Sbjct: 463 LDCL---NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACW 519
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
MI G +G ++A+ LF + L +G P T VL CS + GK +
Sbjct: 520 ASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLR 579
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMG 359
GI M+ +V++ ++ G + A + + + E DPV ++L+ HG + G
Sbjct: 580 A-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHGLIQDG 636
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 131/314 (41%), Gaps = 37/314 (11%)
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNS 110
L G QVH + +K G D+ V ++L LY +CGS ES+K
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK------------------- 506
Query: 111 VLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN 170
+F +P +D W++MI G+ + G L + + FS M + G P+
Sbjct: 507 ----------------LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPD 550
Query: 171 EXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFE 230
E G+ +H + +G+ALV+MY+KCG ++ +R +++
Sbjct: 551 ESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Query: 231 SISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSE 290
+ D + + +I G + HGL +D LF + GF + +L A ++ S
Sbjct: 611 RLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSL 670
Query: 291 GKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDAC 350
G + + + G+ E ++ + ++ G +D+ + PD + W L+ +
Sbjct: 671 GAQ-VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIASY 728
Query: 351 KVHGFVDMGEKIGN 364
HG + ++ N
Sbjct: 729 AQHGKANEALQVYN 742
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 137/368 (37%), Gaps = 73/368 (19%)
Query: 28 FVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSV 87
F KP+ +T++ L AC G VQ A V+K G A DVFV A++ LY +CG
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQ--ARVIKCG-AEDVFVCTAIVDLYAKCG--- 299
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYV 147
+ +A +VF +P VVSW+ M+ GY
Sbjct: 300 --------------------------------HMAEAMEVFSRIPNPSVVSWTVMLSGYT 327
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
++ LE F MR G+ N VH+ + F +
Sbjct: 328 KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS 387
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTW---NVMICGLASHGLAKDALALFHKFL 264
V AL+ MY+K G I+ S +FE + DI NVMI + A+ LF + L
Sbjct: 388 VAAALISMYSKSGDIDLSEQVFEDL--DDIQRQNIVNVMITSFSQSKKPGKAIRLFTRML 445
Query: 265 SEGFIPVNV---TFVGVLNACSMG----------GLVSE---GKRYFNLMVDCYGIQPEM 308
EG + + VL+ ++G GLV + G F L C ++
Sbjct: 446 QEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESY 505
Query: 309 EHY-----------GCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHG 354
+ + M+ G + EA+ L M PD A +L C H
Sbjct: 506 KLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHP 565
Query: 355 FVDMGEKI 362
+ G++I
Sbjct: 566 SLPRGKEI 573
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 106/247 (42%), Gaps = 9/247 (3%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
DV S+L+ +G + DA K+FD +P+ DVVS + MI GY Q+ L E+ L FS M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
G NE V + + V +AL+D+++K E
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
+ +F +++ WN +I G + LFH+ P + T+ VL AC+
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 284 MGGLVSEGKRYFNLMVDCYGIQPEMEH-YGC--MVDLLARAGLVDEAVHLIETMTVEPDP 340
S K F +V I+ E + C +VDL A+ G + EA+ + + P
Sbjct: 263 -----SLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSV 316
Query: 341 VLWATLL 347
V W +L
Sbjct: 317 VSWTVML 323
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 2/218 (0%)
Query: 117 RNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
+N DA KVF + +V W+T+I G ++N + F M +P+
Sbjct: 197 KNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSS 256
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD 236
G+ V + + V V TA+VD+YAKCG + ++ +F I
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
+ +W VM+ G A AL +F + G N T V++AC +V E +
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHA 375
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
+ G + ++ + +++G +D + + E +
Sbjct: 376 WVFKS-GFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 205/422 (48%), Gaps = 36/422 (8%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
++ F FA S L G Q+H + + V N+L+ +Y +C
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC-------- 399
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL 151
+FEE AE +F +P+R VSW+ +I GYVQ GL
Sbjct: 400 EMFEE---------------------------AELIFKSLPQRTTVSWTALISGYVQKGL 432
Query: 152 LEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTA 211
GL+ F+ MR +R ++ G+ +H+ I V G+
Sbjct: 433 HGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 212 LVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
LVDMYAKCG I+ + +FE + ++ +WN +I A +G + A+ F K + G P
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 272 NVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLI 331
+V+ +GVL ACS G V +G YF M YGI P+ +HY CM+DLL R G EA L+
Sbjct: 553 SVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM 612
Query: 332 ETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD-GHYVQLAGIYAKARKW 390
+ M EPD ++W+++L+AC++H + E+ KL ++ + D YV ++ IYA A +W
Sbjct: 613 DEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEW 672
Query: 391 EDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAA 450
E V V+K M E+ KKV +S VE+ IH F + D+ H +I R + + I
Sbjct: 673 EKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE 732
Query: 451 GY 452
GY
Sbjct: 733 GY 734
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 133/337 (39%), Gaps = 41/337 (12%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
+ESI ++ M R+ +P+ TF+ L A LG Q+HA V GF+RD V
Sbjct: 232 TESIHLFLKM--RQSGHQPSDFTFSGVLKAVVGLHDFALGQ--QLHALSVTTGFSRDASV 287
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
N ++ Y ++ + + +FDEMP
Sbjct: 288 GNQILDFYS-----------------------------------KHDRVLETRMLFDEMP 312
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
E D VS++ +I Y Q E L F M+ G + GR
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
+H + VG +LVDMYAKC E++ +F+S+ + +W +I G GL
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGL 432
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
L LF K TF VL A + + GK+ ++ ++ G
Sbjct: 433 HGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
+VD+ A+ G + +AV + E M + + V W L+ A
Sbjct: 493 -LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 152/364 (41%), Gaps = 49/364 (13%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
NS E+ ++ M R P+ TFT L C A + QVHA VKLGF
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCND--AVPQNAVGQVHAFAVKLGFDT 180
Query: 69 DVF--VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEK 126
+ F V N L+ YCE +R+ D C
Sbjct: 181 NPFLTVSNVLLKSYCEV-------RRL-----DLACV----------------------- 205
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
+F+E+PE+D V+++T+I GY ++GL + + F MR+ G +P++
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 187 XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICG 246
G+ +H+ + F VG ++D Y+K + ++R LF+ + D ++NV+I
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
+ + +L F + GF N F +L+ + + G++ + C +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ-----LHCQALLA 380
Query: 307 EME---HYG-CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKI 362
+ H G +VD+ A+ + +EA + +++ + V W L+ G G K+
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 363 GNKL 366
K+
Sbjct: 440 FTKM 443
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 8/230 (3%)
Query: 56 QVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGV 115
+V A ++K GF D N ++ G V + ++V++E + V+ N++++G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQ-VSAARKVYDEMPH---KNTVSTNTMISGH 89
Query: 116 VRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM--REKGIRPNEXX 173
V+ G++ A +FD MP+R VV+W+ ++ Y +N ++ + F M P+
Sbjct: 90 VKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVT 149
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRIT--VPVGTALVDMYAKCGCIEKSRALFES 231
VH+ L F + V L+ Y + ++ + LFE
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 232 ISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNA 281
I KD T+N +I G GL +++ LF K G P + TF GVL A
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
++ +Q TF L A A+ LG Q+HA +++ G +VF + L+ +Y +CG S++
Sbjct: 448 LRADQSTFATVLKASASFASLLLGK--QLHAFIIRSGNLENVFSGSGLVDMYAKCG-SIK 504
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
+VFEE D + V+WN++++ NG+ A F +M E + S I+G +
Sbjct: 505 DAVQVFEEMPD---RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Query: 149 N----GLLEDGLECFSVMRE-KGIRPNE 171
G +E G E F M GI P +
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKK 589
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 233/451 (51%), Gaps = 46/451 (10%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRF-VKPNQHTFTFALHACTKRAASGLGSGVQVHA 59
MIR +++ S P + + M++ + P+ TF F + AC K A G Q+H
Sbjct: 84 MIRICSRS-SQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK--ACFFSVGKQIHC 140
Query: 60 HVVKLG-FARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRN 118
VVK G F D V+ ++ +Y E D L
Sbjct: 141 WVVKNGVFLSDGHVQTGVLRIYVE----------------DKL----------------- 167
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
+ DA KVFDE+P+ DVV W ++ GYV+ GL +GLE F M +GI P+E
Sbjct: 168 --LFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTAL 225
Query: 179 XXXXXXXXXECGRFVHSTIESLKF-RITVPVGTALVDMYAKCGCIEKSRALFESISGKDI 237
G+++H ++ ++ V VGTALVDMYAKCGCIE + +FE ++ +++
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNV 285
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSE-GFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
++W +I G A++G AK A + E G P +V +GVL AC+ GG + EG+
Sbjct: 286 FSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFV 356
M YGI P+ EHY C+VDL+ RAG +D+A+ LIE M ++P +W LL+ C+ H V
Sbjct: 346 NMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 357 DMGEKIGNKLIQLDPMH----DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
++GE L+ L+ + + VQL+ IY ++ + +VR ++ ++ +K GWS
Sbjct: 406 ELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
Query: 413 LVELEGGIHHFVAGDKDHDCSSDIYRMLETI 443
L+E++G + FV+GD H I+ ++ +
Sbjct: 466 LLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 214/394 (54%), Gaps = 18/394 (4%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ Y+ MLR +KP++ L A + S G+Q+H +VK GF F++
Sbjct: 288 EALVYYTEMLRCG--MKPSEVMMVDLLSASARSVGSS--KGLQLHGTIVKRGFDCYDFLQ 343
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
+IH Y + K ++ E ++ + + N+++AG V+NG + A +VFD+ +
Sbjct: 344 ATIIHFY----AVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD 399
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+D+ SW+ MI GY Q+ + L F M ++P+ E G+
Sbjct: 400 KDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKR 459
Query: 193 VHSTIESLKFRITVP---VGTALVDMYAKCGCIEKSRALF---ESISGKDIWTWNVMICG 246
H + L F P + A++DMYAKCG IE + +F ++IS I WN +ICG
Sbjct: 460 AH---DYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICG 516
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
A+HG AK AL L+ S P ++TFVGVL+AC GLV GK YF M +GI+P
Sbjct: 517 SATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEP 576
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKL 366
+++HYGCMVDLL +AG ++EA +I+ M V+ D ++W LL A + HG V++ E +L
Sbjct: 577 DIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATEL 636
Query: 367 IQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLM 400
+DP H G V L+ +YA A +WEDV VR+ M
Sbjct: 637 AAIDPSHGGCKVMLSNVYADAGRWEDVALVREEM 670
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 210/484 (43%), Gaps = 97/484 (20%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I+ +A+ N+ SE++ ++ M R + N+ T + AC+ G+ + +
Sbjct: 144 LIKGYAQ-NNQWSEAMELFREM--RNLGIMLNEVTLATVISACSHLG--GIWDCRMLQSL 198
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+KL VFV L+H+YC C ++ +++F+E + ++VTWN +L G + G
Sbjct: 199 AIKLKLEGRVFVSTNLLHMYCLC-LCLKDARKLFDEMPE---RNLVTWNVMLNGYSKAGL 254
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
I AE++FD++ E+D+VSW TMI G ++ L++ L ++ M G++P+E
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA 314
Query: 181 XXXXXXXECGRFVHSTIESLKF-------------------------------RITVPVG 209
G +H TI F + +
Sbjct: 315 SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASR 374
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
AL+ + K G +E++R +F+ KDI++WN MI G A + AL LF + +S +
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 270 -PVNVTFVGVLNACSMGGLVSEGKR---YFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
P +T V V +A S G + EGKR Y N I P ++D+ A+ G ++
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFST----IPPNDNLTAAIIDMYAKCGSIE 490
Query: 326 EAVHL-------------------------------------IETMTVEPDPVLWATLLD 348
A+++ ++++ ++P+ + + +L
Sbjct: 491 TALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLS 550
Query: 349 ACKVHGFVDMGEKIGNKL-----IQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEK 403
AC G V++G+ + I+ D H G V L G KA + E+ K MI+K
Sbjct: 551 ACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLG---KAGRLEEA----KEMIKK 603
Query: 404 VSKK 407
+ K
Sbjct: 604 MPVK 607
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 153/311 (49%), Gaps = 23/311 (7%)
Query: 23 LRRRRFVKPNQHTFTFALHAC-TKRA-ASGLGS---------GVQVHAHVVKLGFARDVF 71
L+ R F P++ F F+ + T+RA S LGS G Q+H V+K G + +
Sbjct: 18 LQARCFSAPSRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGY 77
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
+ N+++++Y +C ++ + VF + D ++N ++ G VR+ + DA K+FD M
Sbjct: 78 ICNSVLNMYAKCRLLADA-ESVFRDHAKL---DSASFNIMVDGYVRSRRLWDALKLFDVM 133
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
PER VS++T+I GY QN + +E F MR GI NE R
Sbjct: 134 PERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCR 193
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+ S LK V V T L+ MY C C++ +R LF+ + +++ TWNVM+ G + G
Sbjct: 194 MLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAG 253
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
L + A LF + + V++ +++ C + E Y+ M+ C G++P
Sbjct: 254 LIEQAEELFDQITEKDI----VSWGTMIDGCLRKNQLDEALVYYTEMLRC-GMKPSEVM- 307
Query: 312 GCMVDLLARAG 322
MVDLL+ +
Sbjct: 308 --MVDLLSASA 316
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 229/445 (51%), Gaps = 40/445 (8%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N P +++ +Y ML F++P + + AL AC +G G+ HA +VK
Sbjct: 214 NGSPRDALIVYVDMLCS--FIEPGNFSISVALKACVDLKDLRVGRGI--HAQIVKRKEKV 269
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D V N L+ LY E G +F+ DA KVF
Sbjct: 270 DQVVYNVLLKLYMESG--------LFD---------------------------DARKVF 294
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
D M ER+VV+W+++I + + + F M+E+ I +
Sbjct: 295 DGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALL 354
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G+ +H+ I K + VP+ +L+DMY KCG +E SR +F+ + KD+ +WN+M+ A
Sbjct: 355 TGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYA 414
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
+G ++ + LF + G P +TFV +L+ CS GL G F M + + P +
Sbjct: 415 INGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPAL 474
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
EHY C+VD+L RAG + EAV +IETM +P +W +LL++C++HG V +GE +L
Sbjct: 475 EHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFV 534
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
L+P + G+YV ++ IYA A+ W++V ++R++M ++ KK AG S V+++ I FVAG
Sbjct: 535 LEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGG 594
Query: 429 DHDCSSDIYRMLET-IGQGITAAGY 452
+SD Y+ + T + + I +GY
Sbjct: 595 YEFRNSDEYKKVWTELQEAIEKSGY 619
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 134/326 (41%), Gaps = 40/326 (12%)
Query: 124 AEKVFDEMPERDVVS---WSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
A K+FD++ + +++ W+ M +GY +NG D L + M I P
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
GR +H+ I K ++ V L+ +Y + G + +R +F+ +S +++ TW
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR------- 293
N +I L+ + LF K E T +L ACS + GK
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 294 --------YFNLMVDCYGIQPEMEH---------------YGCMVDLLARAGLVDEAVHL 330
N ++D YG E+E+ + M++ A G ++E ++L
Sbjct: 366 SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINL 425
Query: 331 IETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKL---IQLDPMHDGHYVQLAGIY 384
E M V PD + + LL C G + G + ++ ++ P + HY L I
Sbjct: 426 FEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALE-HYACLVDIL 484
Query: 385 AKARKWEDVVRVRKLMIEKVSKKVAG 410
+A K ++ V+V + M K S + G
Sbjct: 485 GRAGKIKEAVKVIETMPFKPSASIWG 510
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 193/353 (54%), Gaps = 6/353 (1%)
Query: 101 LCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFS 160
L +D + ++L +NG++ A K+FDEMP RDV SW+ +I G V + +E +
Sbjct: 140 LSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYK 199
Query: 161 VMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCG 220
M +GIR +E + G + + V V A +DMY+KCG
Sbjct: 200 RMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSN----DNVIVSNAAIDMYSKCG 255
Query: 221 CIEKSRALFESISGK-DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVL 279
++K+ +FE +GK + TWN MI G A HG A AL +F K G P +V+++ L
Sbjct: 256 FVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAAL 315
Query: 280 NACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPD 339
AC GLV G FN M C G++ M+HYGC+VDLL+RAG + EA +I +M++ PD
Sbjct: 316 TACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPD 374
Query: 340 PVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKL 399
PVLW +LL A +++ V+M E ++ ++ +DG +V L+ +YA +W+DV RVR
Sbjct: 375 PVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDD 434
Query: 400 MIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
M K KK+ G S +E +G IH F DK H+ +IY ++ I I GY
Sbjct: 435 MESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGY 487
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 17/168 (10%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
+ + SE++ +Y M ++ ++ T AL AC+ G + H G++
Sbjct: 187 SGNRASEAMELYKRM--ETEGIRRSEVTVVAALGACSHLGDVKEGENI-FH------GYS 237
Query: 68 RD-VFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEK 126
D V V NA I +Y +CG V+ +VFE+ T VVTWN+++ G +GE A +
Sbjct: 238 NDNVIVSNAAIDMYSKCGF-VDKAYQVFEQF--TGKKSVVTWNTMITGFAVHGEAHRALE 294
Query: 127 VFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN 170
+FD++ + D VS+ + GL+E GL F+ M KG+ N
Sbjct: 295 IFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERN 342
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 228/438 (52%), Gaps = 46/438 (10%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRF-VKPNQHTFTFALHACTKRAASGLGSGVQVHA 59
MIR +++ S P + + M++ + P+ TF F + AC K A G Q+H
Sbjct: 84 MIRICSRS-SQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK--ACFFSVGKQIHC 140
Query: 60 HVVKLG-FARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRN 118
VVK G F D V+ ++ +Y E D L
Sbjct: 141 WVVKNGVFLSDSHVQTGVLRIYVE----------------DKL----------------- 167
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
+ DA KVFDE+P+ DVV W ++ GYV+ GL +GLE F M KG+ P+E
Sbjct: 168 --LLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTAL 225
Query: 179 XXXXXXXXXECGRFVHSTIESLKF-RITVPVGTALVDMYAKCGCIEKSRALFESISGKDI 237
G+++H ++ + V VGTALVDMYAKCGCIE + +F+ ++ +++
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNV 285
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSE-GFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
++W +I G A++G AK A+ + E G P +V +GVL AC+ GG + EG+
Sbjct: 286 FSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLE 345
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFV 356
M Y I P+ EHY C+VDL+ RAG +D+A++LIE M ++P +W LL+ C+ H V
Sbjct: 346 NMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 357 DMGEKIGNKLIQLDPMH----DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
++GE L+ L+ + + VQL+ IY ++ + +VR ++ ++ +K GWS
Sbjct: 406 ELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 465
Query: 413 LVELEGGIHHFVAGDKDH 430
++E++G + FV+GD H
Sbjct: 466 VLEVDGNVTKFVSGDVSH 483
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 223/452 (49%), Gaps = 48/452 (10%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGV----QVHAHVVKL 64
N SE++ I+ M R K ++ T + L AC G+ ++H VK
Sbjct: 140 NRMESEALDIFLEM--RNEGFKFSEFTISSVLSAC------GVNCDALECKKLHCLSVKT 191
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
+++V AL+ LY +CG I+DA
Sbjct: 192 CIDLNLYVGTALLDLYAKCGM-----------------------------------IKDA 216
Query: 125 EKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXX 184
+VF+ M ++ V+WS+M+ GYVQN E+ L + + + N+
Sbjct: 217 VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL 276
Query: 185 XXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMI 244
G+ +H+ I F V V ++ VDMYAKCG + +S +F + K++ WN +I
Sbjct: 277 AALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTII 336
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGI 304
G A H K+ + LF K +G P VTF +L+ C GLV EG+R+F LM YG+
Sbjct: 337 SGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGL 396
Query: 305 QPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGN 364
P + HY CMVD+L RAGL+ EA LI+++ +P +W +LL +C+V+ +++ E
Sbjct: 397 SPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAE 456
Query: 365 KLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFV 424
KL +L+P + G++V L+ IYA ++WE++ + RKL+ + KKV G S ++++ +H F
Sbjct: 457 KLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFS 516
Query: 425 AGDKDHDCSSDIYRMLETIGQGITAAGY-PSV 455
G+ H +I L+ + GY PSV
Sbjct: 517 VGESGHPRIREICSTLDNLVIKFRKFGYKPSV 548
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
DV N ++ + G + A +VFD M ER +VSW+TMI Y +N + + L+ F MR
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 164 EKGIRPNEXXXXXXXXXXXXX-XXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI 222
+G + +E EC + +H + + VGTAL+D+YAKCG I
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKK-LHCLSVKTCIDLNLYVGTALLDLYAKCGMI 213
Query: 223 EKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC 282
+ + +FES+ K TW+ M+ G + ++AL L+ + T V+ AC
Sbjct: 214 KDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL 342
S + EGK+ ++ G + VD+ A+ G + E+ ++I + E + L
Sbjct: 274 SNLAALIEGKQMHAVICKS-GFGSNVFVASSAVDMYAKCGSLRES-YIIFSEVQEKNLEL 331
Query: 343 WATLLDACKVHG 354
W T++ H
Sbjct: 332 WNTIISGFAKHA 343
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H I + V + L++ Y+KCG +E +R +F+ + + + +WN MI + +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
+AL +F + +EGF T VL+AC + E K+ L V I +
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKT-CIDLNLYVGTA 202
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
++DL A+ G++ +AV + E+M + V W++++
Sbjct: 203 LLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMV 235
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 218/431 (50%), Gaps = 39/431 (9%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+ PN+ T L A LG ++H ++K GF + A+I +Y +CG
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGR--ELHGFIIKKGFDNRCNIGCAVIDMYAKCG---- 490
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
+ A ++F+ + +RD+VSW++MI Q
Sbjct: 491 -------------------------------RMNLAYEIFERLSKRDIVSWNSMITRCAQ 519
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
+ ++ F M GI + G+ +H + V
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSE-G 267
+ L+DMYAKCG ++ + +F+++ K+I +WN +I +HG KD+L LFH+ + + G
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
P +TF+ ++++C G V EG R+F M + YGIQP+ EHY C+VDL RAG + EA
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 328 VHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKA 387
+++M PD +W TLL AC++H V++ E +KL+ LDP + G+YV ++ +A A
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANA 759
Query: 388 RKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGI 447
R+WE V +VR LM E+ +K+ G+S +E+ H FV+GD +H SS IY +L ++ +
Sbjct: 760 REWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGEL 819
Query: 448 TAAGY-PSVHL 457
GY P +L
Sbjct: 820 RLEGYIPQPYL 830
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 167/415 (40%), Gaps = 78/415 (18%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS--- 85
+ PN TF L C + LG VQ+H VV G + ++N+L+ +Y +CG
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLG--VQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 86 ----------------------------SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVR 117
ES +E + D +T++S+L V +
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 118 --NGE---------------------------------IRDAEKVFDEMPERDVVSWSTM 142
N E + A+ +F + DVV ++ M
Sbjct: 353 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF 202
I GY+ NGL D LE F + + I PNE + GR +H I F
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 472
Query: 203 RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHK 262
+G A++DMYAKCG + + +FE +S +DI +WN MI A A+ +F +
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ 532
Query: 263 FLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAG 322
G V+ L+AC+ S GK M+ + + ++ ++D+ A+ G
Sbjct: 533 MGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCG 591
Query: 323 LVDEAVHLIETMTVEPDPVLWATLLDACKVHG--------FVDMGEKIGNKLIQL 369
+ A+++ +TM E + V W +++ AC HG F +M EK G + Q+
Sbjct: 592 NLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQI 645
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 11/224 (4%)
Query: 102 CSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSV 161
C++ V +S++ + G+I K+FD + ++D V W+ M+ GY + G L+ ++ FSV
Sbjct: 171 CNEFVA-SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSV 229
Query: 162 MREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGC 221
MR I PN + G +H + + +L+ MY+KCG
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 222 IEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNA 281
+ + LF +S D TWN MI G GL +++L F++ +S G +P +TF +L +
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 282 CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
S ++ NL C I + + +D+ + L+D
Sbjct: 350 VS---------KFENLEY-CKQIHCYIMRHSISLDIFLTSALID 383
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 136/351 (38%), Gaps = 46/351 (13%)
Query: 13 SESIAIYSAMLRRR---RFVKPN-QHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
+ +IA Y L R RF++ + L AC+ + L G QVHA ++ +
Sbjct: 11 APAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSN--PNLLRQGKQVHAFLIVNSISG 68
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D + ++ +Y CGS + K + + +R IR
Sbjct: 69 DSYTDERILGMYAMCGSFSDCGKMFYRLD------------------LRRSSIR------ 104
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
W+++I +V+NGLL L + M G+ P+ +
Sbjct: 105 ---------PWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK 155
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
F+ T+ SL V ++L+ Y + G I+ LF+ + KD WNVM+ G A
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
G + F + P VTF VL+ C+ L+ G + L+V G+ E
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV-VSGVDFEG 274
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMG 359
++ + ++ G D+A L M+ D V W C + G+V G
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTW-----NCMISGYVQSG 319
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/470 (29%), Positives = 224/470 (47%), Gaps = 41/470 (8%)
Query: 21 AMLRRRRF--VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIH 78
A+L+R + +KP+ + + L A + LG + H ++++ DV+V LI
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI--HGYILRNQLWYDVYVETTLID 268
Query: 79 LYCECGSSVESFKRVFEE--------------------------------EEDTLCSDVV 106
+Y + G + + VF+ E++ + D +
Sbjct: 269 MYIKTGY-LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAI 327
Query: 107 TWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVM 162
TWNS+ +G G+ A V +M E+ +VVSW+ + G +NG + L+ F M
Sbjct: 328 TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 387
Query: 163 REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI 222
+E+G+ PN G+ VH V TALVDMY K G +
Sbjct: 388 QEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDL 447
Query: 223 EKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC 282
+ + +F I K + +WN M+ G A G ++ +A F L G P +TF VL+ C
Sbjct: 448 QSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVC 507
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL 342
GLV EG +YF+LM YGI P +EH CMVDLL R+G +DEA I+TM+++PD +
Sbjct: 508 KNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATI 567
Query: 343 WATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIE 402
W L +CK+H +++ E +L L+P + +Y+ + +Y+ +WEDV R+R LM
Sbjct: 568 WGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRN 627
Query: 403 KVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
+ WS ++++ +H F A K H DIY L + + +GY
Sbjct: 628 NRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGY 677
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 161/353 (45%), Gaps = 26/353 (7%)
Query: 22 MLRRRRF--VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHL 79
+ R +F K T L C+ + G G Q+H +V++LG +V + N+LI +
Sbjct: 76 LFREMQFSGAKAYDSTMVKLLQVCSNK--EGFAEGRQIHGYVLRLGLESNVSMCNSLIVM 133
Query: 80 YCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP----ERD 135
Y G +E ++VF +D ++ +WNS+L+ + G + DA + DEM + D
Sbjct: 134 YSRNGK-LELSRKVFNSMKD---RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD 189
Query: 136 VVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHS 195
+V+W++++ GY GL +D + M+ G++P+ + G+ +H
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHG 249
Query: 196 TIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKD 255
I + V V T L+DMY K G + +R +F+ + K+I WN ++ GL+ L KD
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKD 309
Query: 256 ALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMV 315
A AL + EG P +T+ + + + G + M + G+ P + + +
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE-KGVAPNVVSWTAIF 368
Query: 316 DLLARAGLVDEAVHLIETMTVE---PDPVLWATLLD--AC--------KVHGF 355
++ G A+ + M E P+ +TLL C +VHGF
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 139/334 (41%), Gaps = 51/334 (15%)
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
A K+FDEMP+RD ++W+ ++M +++G E +E F M+ G + +
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK-------- 235
GR +H + L V + +L+ MY++ G +E SR +F S+ +
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 236 ---------------------------DIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
DI TWN ++ G AS GL+KDA+A+ + G
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL 221
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD---CYGIQPEMEHYGCMVDLLARAGLVD 325
P + +L A + G + GK ++ Y + E ++D+ + G +
Sbjct: 222 KPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVET----TLIDMYIKTGYLP 277
Query: 326 EAVHLIETMTVEPDPVLWATLLD----ACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLA 381
A + + M + + V W +L+ AC + + ++ + I+ D + + LA
Sbjct: 278 YARMVFDMMDAK-NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAI---TWNSLA 333
Query: 382 GIYAKARKWEDVVRVRKLMIEK-VSKKVAGWSLV 414
YA K E + V M EK V+ V W+ +
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 196/340 (57%), Gaps = 9/340 (2%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MIR + N P E++ ++ M+ + + ++ TF F + AC A+S + G QVH
Sbjct: 89 MIRSLS-VNHKPREALLLFILMMISHQ-SQFDKFTFPFVIKACL--ASSSIRLGTQVHGL 144
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+K GF DVF +N L+ LY +CG +S ++VF++ +V+W ++L G+V N +
Sbjct: 145 AIKAGFFNDVFFQNTLMDLYFKCGKP-DSGRKVFDKMPG---RSIVSWTTMLYGLVSNSQ 200
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ AE VF++MP R+VVSW+ MI YV+N ++ + F M+ ++PNE
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
GR+VH F + +GTAL+DMY+KCG ++ +R +F+ + GK + TW
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFI-PVNVTFVGVLNACSMGGLVSEGKRYFNLMV 299
N MI L HG ++AL+LF + E + P +TFVGVL+AC+ G V +G RYF M+
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Query: 300 DCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPD 339
YGI P EH CM+ LL +A V++A +L+E+M +PD
Sbjct: 381 QVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 210/430 (48%), Gaps = 40/430 (9%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ I+ M R R ++P+ TF L A + + LG Q+H + K G D+F
Sbjct: 437 EALNIFRDM--RFRLIRPSLLTFVSLLRASA--SLTSLGLSKQIHGLMFKYGLNLDIFAG 492
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
+ALI +Y C C ++D+ VFDEM
Sbjct: 493 SALIDVYSNC-----------------YC------------------LKDSRLVFDEMKV 517
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+D+V W++M GYVQ E+ L F ++ RP+E + G+
Sbjct: 518 KDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF 577
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H + + AL+DMYAKCG E + F+S + +D+ WN +I A+HG
Sbjct: 578 HCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEG 637
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
K AL + K +SEG P +TFVGVL+ACS GLV +G + F LM+ +GI+PE EHY C
Sbjct: 638 KKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVC 696
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMH 373
MV LL RAG +++A LIE M +P ++W +LL C G V++ E I DP
Sbjct: 697 MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKD 756
Query: 374 DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCS 433
G + L+ IYA W + +VR+ M + K G S + + +H F++ DK H +
Sbjct: 757 SGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKA 816
Query: 434 SDIYRMLETI 443
+ IY +L+ +
Sbjct: 817 NQIYEVLDDL 826
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 184/442 (41%), Gaps = 82/442 (18%)
Query: 7 KANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGF 66
K N+ E++ ++++M + +KP+ + + L +C A LG G QVHA+ +K
Sbjct: 326 KQNALHKEAMELFTSM--SKFGLKPDMYACSSILTSCASLHA--LGFGTQVHAYTIKANL 381
Query: 67 ARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEK 126
D +V N+LI +Y +C D +T DA K
Sbjct: 382 GNDSYVTNSLIDMYAKC--------------------DCLT---------------DARK 406
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGL---LEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
VFD DVV ++ MI GY + G L + L F MR + IRP+
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVM 243
+ +H + + + G+AL+D+Y+ C C++ SR +F+ + KD+ WN M
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF-------- 295
G ++AL LF + P TF ++ A V G+ +
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586
Query: 296 -------NLMVDCYGI--QPEMEH-------------YGCMVDLLARAGLVDEAVHLIET 333
N ++D Y PE H + ++ A G +A+ ++E
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 334 MT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ--LDPMHDGHYVQLAGIYAKAR 388
M +EP+ + + +L AC G V+ G K +++ ++P + HYV + + +A
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETE-HYVCMVSLLGRAG 705
Query: 389 KWEDVVRVRKLMIEKVSKKVAG 410
+ + + R+L IEK+ K A
Sbjct: 706 R---LNKAREL-IEKMPTKPAA 723
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 143/336 (42%), Gaps = 47/336 (13%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V P+ + + L AC+ L G Q+HAH+++ G D + N LI Y +CG +
Sbjct: 245 VVPDGYILSTVLSACS--ILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
A K+F+ MP ++++SW+T++ GY Q
Sbjct: 303 -----------------------------------AHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
N L ++ +E F+ M + G++P+ G VH+ V
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA---KDALALFHKFLS 265
+L+DMYAKC C+ +R +F+ + D+ +N MI G + G +AL +F
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
P +TFV +L A + + K+ LM YG+ ++ ++D+ + +
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLK 506
Query: 326 EAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEK 361
++ + + M V+ D V+W ++ G+V E
Sbjct: 507 DSRLVFDEMKVK-DLVIWNSMF-----AGYVQQSEN 536
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 126/300 (42%), Gaps = 44/300 (14%)
Query: 57 VHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVV 116
VH ++ G D ++ N LI+LY G V
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVY---------------------------- 97
Query: 117 RNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF-SVMREKGIRPNEXXXX 175
A KVF++MPER++VSWSTM+ +G+ E+ L F R + PNE
Sbjct: 98 -------ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILS 150
Query: 176 XXXXXXXXXXXXECGRFVHSTIESL----KFRITVPVGTALVDMYAKCGCIEKSRALFES 231
GR++ ++S F V VGT L+D Y K G I+ +R +F++
Sbjct: 151 SFIQACSGLDGR--GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDA 208
Query: 232 ISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEG 291
+ K TW MI G G + +L LF++ + + +P VL+ACS+ + EG
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL-EG 267
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACK 351
+ + + YG++ + ++D + G V A L M + + W TLL K
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSGYK 326
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 139/339 (41%), Gaps = 46/339 (13%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
ES+ ++ R R+ PN++ + + AC+ G Q+ + +VK GF RDV+V
Sbjct: 128 ESLVVFLEFWRTRK-DSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVG 186
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
LI Y +++G I A VFD +PE
Sbjct: 187 TLLIDFY-----------------------------------LKDGNIDYARLVFDALPE 211
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+ V+W+TMI G V+ G L+ F + E + P+ E G+ +
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI 271
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H+ I + + L+D Y KCG + + LF + K+I +W ++ G + L
Sbjct: 272 HAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALH 331
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM--EHY 311
K+A+ LF G P +L +C+ L + G F V Y I+ + + Y
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCA--SLHALG---FGTQVHAYTIKANLGNDSY 386
Query: 312 --GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLD 348
++D+ A+ + +A + + D VL+ +++
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAA-ADVVLFNAMIE 424
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 142/443 (32%), Positives = 223/443 (50%), Gaps = 45/443 (10%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
+E++ ++ M R FV PN+ T + L+ C SGLG Q+H VVK+GF D++V
Sbjct: 330 NEAVDLFIRM--REAFVVPNEFTLSSILNGCAIGKCSGLGE--QLHGLVVKVGFDLDIYV 385
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
NALI +Y +C E+ DT A K+F E+
Sbjct: 386 SNALIDVYAKC------------EKMDT-----------------------AVKLFAELS 410
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE---KGIRPNEXXXXXXXXXXXXXXXXEC 189
++ VSW+T+I+GY G +G + FS+ RE + E +
Sbjct: 411 SKNEVSWNTVIVGYENLG---EGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
G VH V V +L+DMYAKCG I+ ++++F + D+ +WN +I G ++
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
HGL + AL + P +TF+GVL+ CS GL+ +G+ F M+ +GI+P +E
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
HY CMV LL R+G +D+A+ LIE + EP ++W +L A + + +++++
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKI 647
Query: 370 DPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKD 429
+P + YV ++ +YA A++W +V +RK M E KK G S +E +G +H+F G D
Sbjct: 648 NPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSD 707
Query: 430 HDCSSDIYRMLETIGQGITAAGY 452
H I MLE + T AGY
Sbjct: 708 HPDMKLINGMLEWLNMKATRAGY 730
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 150/374 (40%), Gaps = 48/374 (12%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
++ C+ + N +S+ + S M R PN +TF AL A A GV H
Sbjct: 218 IVSCYVE-NGYFEDSLKLLSCM--RMAGFMPNNYTFDTALKASIGLGAFDFAKGV--HGQ 272
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
++K + D V L+ LY + G +
Sbjct: 273 ILKTCYVLDPRVGVGLLQLYTQLG-----------------------------------D 297
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ DA KVF+EMP+ DVV WS MI + QNG + ++ F MRE + PNE
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
G +H + + F + + V AL+D+YAKC ++ + LF +S K+ +W
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSW 417
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N +I G + G A ++F + L VTF L AC+ + G + L +
Sbjct: 418 NTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIK 477
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
+ ++ ++D+ A+ G + A + M D W L+ HG
Sbjct: 478 TNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTHGLGRQAL 535
Query: 361 KIGNKLIQLDPMHD 374
+I LD M D
Sbjct: 536 RI------LDIMKD 543
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 144/347 (41%), Gaps = 46/347 (13%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
+ I +YS + R + P+ T L +A +H+ +VKLG+ + FV
Sbjct: 129 DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC----PWLHSPIVKLGYDSNAFVG 184
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
ALI+ Y CGS V+S + VFE LC
Sbjct: 185 AALINAYSVCGS-VDSARTVFE---GILC------------------------------- 209
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+D+V W+ ++ YV+NG ED L+ S MR G PN + + V
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV 269
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H I + + VG L+ +Y + G + + +F + D+ W+ MI +G
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFC 329
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
+A+ LF + +P T +LN C++G G++ L+V G ++
Sbjct: 330 NEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV-GFDLDIYVSNA 388
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
++D+ A+ +D AV L ++ + V W T+ + G+ ++GE
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTV-----IVGYENLGE 429
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 146/347 (42%), Gaps = 41/347 (11%)
Query: 102 CSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSV 161
C D+ N +L V+ G +DA +FDEMPER+ VS+ T+ GY +D + +S
Sbjct: 81 CLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSR 136
Query: 162 MREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGC 221
+ +G N E ++HS I L + VG AL++ Y+ CG
Sbjct: 137 LHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 222 IEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNA 281
++ +R +FE I KDI W ++ +G +D+L L GF+P N TF L A
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 282 C-SMGGLVSEGKRYFNLMVDCYGIQPEM--------EHYGCMVD---------------- 316
+G + ++ CY + P + G M D
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 317 --LLAR---AGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
++AR G +EAV L M V P+ +++L+ C + +GE++ +++
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 369 LDPMHDGHYVQ-LAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLV 414
+ D + L +YAK K + V KL E SK W+ V
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAV---KLFAELSSKNEVSWNTV 420
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 231 bits (589), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 186/313 (59%), Gaps = 1/313 (0%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
+V+ S++ + G++R A +FD MPER +VSW+++I GY QNG E+ L F M
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
+ GI P++ + G+ +H+ + F + ALV+MYAK G E
Sbjct: 310 DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAE 369
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG-FIPVNVTFVGVLNAC 282
++ FE + KD W V+I GLASHG +AL++F + +G P +T++GVL AC
Sbjct: 370 SAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL 342
S GLV EG+RYF M D +G++P +EHYGCMVD+L+RAG +EA L++TM V+P+ +
Sbjct: 430 SHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNI 489
Query: 343 WATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIE 402
W LL+ C +H +++ ++I + + + + + G YV L+ IYAKA +W DV +R+ M
Sbjct: 490 WGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKS 549
Query: 403 KVSKKVAGWSLVE 415
K KV G S VE
Sbjct: 550 KRVDKVLGHSSVE 562
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 210/496 (42%), Gaps = 96/496 (19%)
Query: 1 MIRCHAKANSP-PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHA 59
MIR ++ NSP P +++ Y MLR+ P+ TF + L AC+ GS V H
Sbjct: 78 MIRGYS--NSPNPDKALIFYQEMLRKG--YSPDYFTFPYVLKACSGLRDIQFGSCV--HG 131
Query: 60 HVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNG 119
VVK GF +++V L+H+Y CG
Sbjct: 132 FVVKTGFEVNMYVSTCLLHMYMCCG----------------------------------- 156
Query: 120 EIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
E+ +VF+++P+ +VV+W ++I G+V N D +E F M+ G++ NE
Sbjct: 157 EVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLV 216
Query: 180 XXXXXXXXECGRFVHSTIESLKFR--------ITVPVGTALVDMYAKCGCIEKSRALFES 231
G++ H ++ L F V + T+L+DMYAKCG + +R LF+
Sbjct: 217 ACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDG 276
Query: 232 ISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEG 291
+ + + +WN +I G + +G A++AL +F L G P VTF+ V+ A + G G
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG 336
Query: 292 KRYFNL---------------MVDCYGIQPEMEH---------------YGCMVDLLARA 321
+ +V+ Y + E + ++ LA
Sbjct: 337 QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 396
Query: 322 GLVDEAVHLIETM----TVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG-- 375
G +EA+ + + M PD + + +L AC G V+ G++ ++ L +
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVE 456
Query: 376 HYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSL--------VELEGGIHHFVAGD 427
HY + I ++A ++E+ R+ K M K + + G L +EL I VA
Sbjct: 457 HYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVA-- 514
Query: 428 KDHDCSSDIYRMLETI 443
+ + S IY +L I
Sbjct: 515 EPEELGSGIYVLLSNI 530
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 18/251 (7%)
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
A VF+ + V W++MI GY + + L + M KG P+
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVM 243
+ G VH + F + + V T L+ MY CG + +FE I ++ W +
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG 303
I G ++ DA+ F + S G V +L AC + GK +F+ + G
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK-WFHGFLQGLG 238
Query: 304 IQPEMEHY--------GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG- 354
P + ++D+ A+ G + A +L + M E V W +++ +G
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGD 297
Query: 355 -------FVDM 358
F+DM
Sbjct: 298 AEEALCMFLDM 308
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 201/399 (50%), Gaps = 35/399 (8%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G ++H +V++ G DV++ ++L+ +Y
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYA-------------------------------- 288
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
++ I D+E+VF + RD +SW++++ GYVQNG + L F M ++P
Sbjct: 289 ---KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS 233
G+ +H + F + + +ALVDMY+KCG I+ +R +F+ ++
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR 293
D +W +I G A HG +A++LF + +G P V FV VL ACS GLV E
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 294 YFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
YFN M YG+ E+EHY + DLL RAG ++EA + I M VEP +W+TLL +C VH
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Query: 354 GFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSL 413
+++ EK+ K+ +D + G YV + +YA +W+++ ++R M +K +K S
Sbjct: 526 KNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSW 585
Query: 414 VELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
+E++ H FV+GD+ H I L+ + + + GY
Sbjct: 586 IEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGY 624
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 190/446 (42%), Gaps = 56/446 (12%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IRC S S+++A + M R P+ + F L +CT L G VH
Sbjct: 76 VIRCFTD-QSLFSKALASFVEMRASGRC--PDHNVFPSVLKSCT--MMMDLRFGESVHGF 130
Query: 61 VVKLGFARDVFVRNALIHLYCEC---GSSVESFKRVFEEEEDTLCS----DVVTWNSVLA 113
+V+LG D++ NAL+++Y + GS + S VF+E + DV ++
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKI-SVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
I +VF+ MP +DVVS++T+I GY Q+G+ ED L M ++P+
Sbjct: 190 F-----GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS 233
G+ +H + V +G++LVDMYAK IE S +F +
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR 293
+D +WN ++ G +G +AL LF + ++ P V F V+ AC+ + GK+
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 294 YFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD---------------------------- 325
++ G + +VD+ ++ G +
Sbjct: 365 LHGYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 326 ---EAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD--GHY 377
EAV L E M V+P+ V + +L AC G VD N + ++ ++ HY
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY 483
Query: 378 VQLAGIYAKARKWEDVVR-VRKLMIE 402
+A + +A K E+ + K+ +E
Sbjct: 484 AAVADLLGRAGKLEEAYNFISKMCVE 509
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 140/434 (32%), Positives = 222/434 (51%), Gaps = 12/434 (2%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI HA S ++++ ML KP+ +TF+ ++AC+ + S + G VHA
Sbjct: 175 MISGHAHCGKLES-CLSLFKEMLESE--FKPDCYTFSSLMNACSADS-SNVVYGRMVHAV 230
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
++K G++ V +N+++ Y + GS ++ + E E V+WNS++ ++ GE
Sbjct: 231 MLKNGWSSAVEAKNSVLSFYTKLGSRDDAMR----ELESIEVLTQVSWNSIIDACMKIGE 286
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
A +VF PE+++V+W+TMI GY +NG E L F M + G+ +
Sbjct: 287 TEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHA 346
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
G+ +H + F+ VG ALV++YAKCG I+++ F I+ KD+ +W
Sbjct: 347 CSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSW 406
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N M+ HGLA AL L+ ++ G P NVTF+G+L CS GLV EG F MV
Sbjct: 407 NTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVK 466
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIET----MTVEPDPVLWATLLDACKVHGFV 356
Y I E++H CM+D+ R G + EA L T +T + W TLL AC H
Sbjct: 467 DYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHT 526
Query: 357 DMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVEL 416
++G ++ L +P + +V L+ +Y +W++ VR+ M+E+ KK G S +E+
Sbjct: 527 ELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEV 586
Query: 417 EGGIHHFVAGDKDH 430
+ FV GD H
Sbjct: 587 GNQVSTFVVGDSSH 600
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 162/389 (41%), Gaps = 46/389 (11%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+IA+++ + R KP+ ++FT L C G +Q + V++ GF + V
Sbjct: 53 EAIALFTQL--RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQ--SLVIRSGFCASLPVN 108
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDV---VTWNSVLAGVVRNGEIRDAEKVFDE 130
N+LI +Y +C ++ S +VF + +C D VTW S+L + + A VF E
Sbjct: 109 NSLIDMYGKCSDTL-SANKVFRD----MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVE 163
Query: 131 MPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN-EXXXXXXXXXXXXXXXXEC 189
MP+R +W+ MI G+ G LE L F M E +P+
Sbjct: 164 MPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVY 223
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCG--------------------------CI- 222
GR VH+ + + V +++ Y K G C+
Sbjct: 224 GRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK 283
Query: 223 ----EKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGV 278
EK+ +F K+I TW MI G +G + AL F + + G + + V
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAV 343
Query: 279 LNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEP 338
L+ACS L+ GK ++ C G Q +V+L A+ G + EA +
Sbjct: 344 LHACSGLALLGHGKMIHGCLIHC-GFQGYAYVGNALVNLYAKCGDIKEADRAFGDI-ANK 401
Query: 339 DPVLWATLLDACKVHGFVDMGEKIGNKLI 367
D V W T+L A VHG D K+ + +I
Sbjct: 402 DLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 36/282 (12%)
Query: 103 SDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM 162
S +V S +A + ++G I A +VFD MPE D V+W+TM+ Y + GL ++ + F+ +
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 163 REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCG-- 220
R +P++ + GR + S + F ++PV +L+DMY KC
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 221 ----------C---------------------IEKSRALFESISGKDIWTWNVMICGLAS 249
C E + +F + + + WN+MI G A
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSM-GGLVSEGKRYFNLMVDCYGIQPEM 308
G + L+LF + L F P TF ++NACS V G+ +M+ G +
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLK-NGWSSAV 240
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDAC 350
E ++ + G D+A+ +E++ V V W +++DAC
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQ-VSWNSIIDAC 281
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 231 bits (588), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 218/433 (50%), Gaps = 42/433 (9%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARD-VFV 72
E++ ++ ML R V P++ TF + AC K + LG+ Q H + K GF+ + ++
Sbjct: 612 EAVVLFQEMLTRG--VNPSEITFATIVEACHKPESLTLGT--QFHGQITKRGFSSEGEYL 667
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+L+ +Y E+ C+ +F E+
Sbjct: 668 GISLLGMYMNSRGMTEA------------CA-----------------------LFSELS 692
Query: 133 E-RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
+ +V W+ M+ G+ QNG E+ L+ + MR G+ P++ GR
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK-DIWTWNVMICGLASH 250
+HS I L + L+DMYAKCG ++ S +F+ + + ++ +WN +I G A +
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH 310
G A+DAL +F +P +TF+GVL ACS G VS+G++ F +M+ YGI+ ++H
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH 872
Query: 311 YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLD 370
CMVDLL R G + EA IE ++PD LW++LL AC++HG GE KLI+L+
Sbjct: 873 VACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELE 932
Query: 371 PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDH 430
P + YV L+ IYA WE +RK+M ++ KKV G+S +++E H F AGDK H
Sbjct: 933 PQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSH 992
Query: 431 DCSSDIYRMLETI 443
I LE +
Sbjct: 993 SEIGKIEMFLEDL 1005
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 169/368 (45%), Gaps = 39/368 (10%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P + + + ++ + F PN+ TF+ L C + + + G Q+H ++K+G R+ +
Sbjct: 141 PGKVLRSFVSLFENQIF--PNKFTFSIVLSTCARE--TNVEFGRQIHCSMIKMGLERNSY 196
Query: 72 VRNALIHLYCECGSSVESFKRVFE--EEEDTLC--------------------------- 102
AL+ +Y +C + +RVFE + +T+C
Sbjct: 197 CGGALVDMYAKC-DRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 103 ---SDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF 159
D + + +V+ +R G+++DA +F EM DVV+W+ MI G+ + G +E F
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 160 SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKC 219
MR+ ++ + G VH+ L + VG++LV MY+KC
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 220 GCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVL 279
+E + +FE++ K+ WN MI G A +G + + LF S G+ + TF +L
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 280 NACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPD 339
+ C+ + G ++ ++++ + + +VD+ A+ G +++A + E M + D
Sbjct: 436 STCAASHDLEMGSQFHSIIIK-KKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRD 493
Query: 340 PVLWATLL 347
V W T++
Sbjct: 494 NVTWNTII 501
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 170/423 (40%), Gaps = 76/423 (17%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI H K E++AI R+ VK + T L A + L G+ VHA
Sbjct: 298 MISGHGKRGC---ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG--IVANLDLGLVVHAE 352
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+KLG A +++V ++L+ +Y +C +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCE-----------------------------------K 377
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ A KVF+ + E++ V W+ MI GY NG +E F M+ G ++
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
E G HS I K + VG ALVDMYAKCG +E +R +FE + +D TW
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTW 497
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N +I +A LF + G + L AC+ + +GK+ L V
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 301 CYGIQPEMEHYGCMVDLLARAGLV------------------------------DEAVHL 330
C G+ ++ ++D+ ++ G++ +EAV L
Sbjct: 558 C-GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVL 616
Query: 331 IETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHY--VQLAGIYA 385
+ M V P + +AT+++AC + +G + ++ + +G Y + L G+Y
Sbjct: 617 FQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM 676
Query: 386 KAR 388
+R
Sbjct: 677 NSR 679
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 142/338 (42%), Gaps = 41/338 (12%)
Query: 39 ALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEE 98
L ACT GL G QVH VK G RD+ ++LI +Y +CG
Sbjct: 535 TLKACTH--VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI------------- 579
Query: 99 DTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLEC 158
I+DA KVF +PE VVS + +I GY QN LE+ +
Sbjct: 580 ----------------------IKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVL 616
Query: 159 FSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP-VGTALVDMYA 217
F M +G+ P+E G H I F +G +L+ MY
Sbjct: 617 FQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM 676
Query: 218 KCGCIEKSRALFESISG-KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFV 276
+ ++ ALF +S K I W M+ G + +G ++AL + + +G +P TFV
Sbjct: 677 NSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFV 736
Query: 277 GVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTV 336
VL CS+ + EG+ +L+ E+ ++D+ A+ G + + + + M
Sbjct: 737 TVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS-NTLIDMYAKCGDMKGSSQVFDEMRR 795
Query: 337 EPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD 374
+ V W +L++ +G+ + KI + + Q M D
Sbjct: 796 RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPD 833
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 147/364 (40%), Gaps = 47/364 (12%)
Query: 45 KRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSD 104
+R A L G VH+ + LG + + NA++ LY +C
Sbjct: 70 QRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCA-------------------- 109
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
++ AEK FD + E+DV +W++M+ Y G L F + E
Sbjct: 110 ---------------QVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE 153
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEK 224
I PN+ E GR +H ++ + G ALVDMYAKC I
Sbjct: 154 NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISD 213
Query: 225 SRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSM 284
+R +FE I + W + G GL ++A+ +F + EG P ++ FV V+N
Sbjct: 214 ARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIR 273
Query: 285 GGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM---TVEPDPV 341
G + + + F M P++ + M+ + G A+ M +V+
Sbjct: 274 LGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS 328
Query: 342 LWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYV--QLAGIYAKARKWEDVVRVRKL 399
++L A + +D+G + + I+L + YV L +Y+K K E +V +
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKL-GLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 400 MIEK 403
+ EK
Sbjct: 388 LEEK 391
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 17/231 (7%)
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
G+ VHS L +G A+VD+YAKC + + F+ + KD+ WN M+ +S
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSS 137
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
G L F P TF VL+ C+ V G++ M+ G++
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLERNSY 196
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
G +VD+ A+ + +A + E + V+P+ V W C G+V G L+
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWI-VDPNTVCW-----TCLFSGYVKAGLPEEAVLVFE 250
Query: 370 DPMHDGH------YVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLV 414
+GH +V + Y + K +D R L E S V W+++
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKD---ARLLFGEMSSPDVVAWNVM 298
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 213/439 (48%), Gaps = 42/439 (9%)
Query: 16 IAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNA 75
+ +Y ML V P + T A+ A + + +G Q+HA V+K GF ++ V N+
Sbjct: 198 LKMYKQMLLENAEVTP--YCITIAVRASA--SIDSVTTGKQIHASVIKRGFQSNLPVMNS 253
Query: 76 LIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERD 135
++ LYC C G + +A+ F EM ++D
Sbjct: 254 ILDLYCRC-----------------------------------GYLSEAKHYFHEMEDKD 278
Query: 136 VVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHS 195
+++W+T+I ++ + L F +G PN CG+ +H
Sbjct: 279 LITWNTLI-SELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 196 TIESLKFRITVPVGTALVDMYAKCGCIEKSRALF-ESISGKDIWTWNVMICGLASHGLAK 254
I F V + AL+DMYAKCG I S+ +F E + +++ +W M+ G SHG
Sbjct: 338 RIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGA 397
Query: 255 DALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCM 314
+A+ LF K +S G P + F+ VL+AC GLV +G +YFN+M YGI P+ + Y C+
Sbjct: 398 EAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCV 457
Query: 315 VDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKI-GNKLIQLDPMH 373
VDLL RAG + EA L+E M +PD W +L ACK H + ++ K+++L P
Sbjct: 458 VDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKM 517
Query: 374 DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCS 433
G YV L+ IYA KW D RVRK+M +KK AG S + +E + F DK +
Sbjct: 518 VGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNA 577
Query: 434 SDIYRMLETIGQGITAAGY 452
S +Y +L + + AGY
Sbjct: 578 SSVYSVLGLLIEETREAGY 596
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 161/376 (42%), Gaps = 77/376 (20%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
++ PN+ T + L +C R L G VH VVKLG ++V NA++++Y C
Sbjct: 104 KQGTSPNEFTLSSVLKSC--RNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
++E+ A +F ++ ++ V+W+T+I G
Sbjct: 162 TMEA----------------------------------ACLIFRDIKVKNDVTWTTLITG 187
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
+ G GL+ + M + G+ +H+++ F+
Sbjct: 188 FTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSN 247
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
+PV +++D+Y +CG + +++ F + KD+ TWN +I L + +AL +F +F S
Sbjct: 248 LPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFES 306
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGK----RYF-----------NLMVDCY---GIQPE 307
+GF+P TF ++ AC+ ++ G+ R F N ++D Y G P+
Sbjct: 307 QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPD 366
Query: 308 MEH-YGCMVDLLARAGLVD---------------EAVHLIETMT---VEPDPVLWATLLD 348
+ +G +VD R LV EAV L + M + PD +++ +L
Sbjct: 367 SQRVFGEIVD---RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLS 423
Query: 349 ACKVHGFVDMGEKIGN 364
AC+ G V+ G K N
Sbjct: 424 ACRHAGLVEKGLKYFN 439
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 7/241 (2%)
Query: 110 SVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRP 169
+++ G + +A +FDEMP+RDVV+W+ MI GY + ECF M ++G P
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 170 NEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCG-CIEKSRAL 228
NE G VH + L ++ V A+++MYA C +E + +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 229 FESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG--FIPVNVTFVGVLNACSMGG 286
F I K+ TW +I G G L ++ + L E P +T + V + S+
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT-IAVRASASIDS 228
Query: 287 LVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATL 346
V+ GK+ ++ G Q + ++DL R G + EA H M + D + W TL
Sbjct: 229 -VTTGKQIHASVIK-RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTL 285
Query: 347 L 347
+
Sbjct: 286 I 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
+ T L+ Y + G +E++R+LF+ + +D+ W MI G AS A FH+ + +G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
P T VL +C +++ G ++V G++ + M+++ A + EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKL-GMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 328 VHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIG 363
LI + V W TL + GF +G+ IG
Sbjct: 166 ACLIFRDIKVKNDVTWTTL-----ITGFTHLGDGIG 196
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 231/441 (52%), Gaps = 50/441 (11%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E+++++S M R F+ P+ + L A TK A L G+Q+H++++K GF
Sbjct: 349 NGYADEAVSVFSQM-RSSGFI-PDAISLRSLLCAQTKPMA--LSQGMQIHSYIIKWGFLA 404
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D+ V N+L+ +Y C F +FE+ + +D V+WN++L +++ + + ++F
Sbjct: 405 DLTVCNSLLTMYTFCSDLYCCFN-LFEDFRNN--ADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 129 DEMP----ERDVVSWSTMIMGYVQNGLLEDG--LECFSVMREKGIRPNEXXXXXXXXXXX 182
M E D ++ ++ G V+ L+ G + C+S+ + G+ P +
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL--KTGLAPEQF---------- 509
Query: 183 XXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNV 242
+ L+DMYAKCG + ++R +F+S+ +D+ +W+
Sbjct: 510 -------------------------IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWST 544
Query: 243 MICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
+I G A G ++AL LF + S G P +VTFVGVL ACS GLV EG + + M +
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEH 604
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKI 362
GI P EH C+VDLLARAG ++EA I+ M +EPD V+W TLL ACK G V + +K
Sbjct: 605 GISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKA 664
Query: 363 GNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHH 422
++++DP + +V L ++A + WE+ +R M + KK+ G S +E+E IH
Sbjct: 665 AENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHI 724
Query: 423 FVAGDKDHDCSSDIYRMLETI 443
F A D H DIY +L I
Sbjct: 725 FFAEDIFHPERDDIYTVLHNI 745
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 156/346 (45%), Gaps = 41/346 (11%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N +E+I +Y ML+ + P+Q F + AC ++S +G G Q+HA V+KL +
Sbjct: 146 NGQGAEAIRLYLKMLQED--LVPDQFAFGSIIKACA--SSSDVGLGKQLHAQVIKLESSS 201
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+ +NALI +Y VR ++ DA +VF
Sbjct: 202 HLIAQNALIAMY-----------------------------------VRFNQMSDASRVF 226
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGI-RPNEXXXXXXXXXXXXXXXX 187
+P +D++SWS++I G+ Q G + L M G+ PNE
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
+ G +H + G +L DMYA+CG + +R +F+ I D +WNV+I GL
Sbjct: 287 DYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGL 346
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
A++G A +A+++F + S GFIP ++ +L A + +S+G + + ++ +G +
Sbjct: 347 ANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLAD 405
Query: 308 MEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
+ ++ + + +L E D V W T+L AC H
Sbjct: 406 LTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 14/289 (4%)
Query: 77 IHLYCECGSS--VESFKRVFEEEEDTLCS-DVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
I L C C SS + +++ + ++ C D + N +L+ + G +RDA +VFD MPE
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
R++VS++++I GY QNG + + + M ++ + P++ G+ +
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H+ + L+ + AL+ MY + + + +F I KD+ +W+ +I G + G
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFE 250
Query: 254 KDALALFHKFLSEG-FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY- 311
+AL+ + LS G F P F L ACS G + L I+ E+
Sbjct: 251 FEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC-----IKSELAGNA 305
Query: 312 --GC-MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
GC + D+ AR G ++ A + + + PD W ++ +G+ D
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYAD 353
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 123/330 (37%), Gaps = 48/330 (14%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
PN++ F +L AC+ GS Q+H +K A + +L +Y CG
Sbjct: 268 PNEYIFGSSLKACSSLLRPDYGS--QIHGLCIKSELAGNAIAGCSLCDMYARCGF----- 320
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
+ A +VFD++ D SW+ +I G NG
Sbjct: 321 ------------------------------LNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 151 LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGT 210
++ + FS MR G P+ G +HS I F + V
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCN 410
Query: 211 ALVDMYAKCGCIEKSRALFESI-SGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
+L+ MY C + LFE + D +WN ++ H + L LF L
Sbjct: 411 SLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE 470
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY----GIQPEMEHYGCMVDLLARAGLVD 325
P ++T +L C + G + V CY G+ PE ++D+ A+ G +
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQ-----VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLG 525
Query: 326 EAVHLIETMTVEPDPVLWATLLDACKVHGF 355
+A + ++M D V W+TL+ GF
Sbjct: 526 QARRIFDSMD-NRDVVSWSTLIVGYAQSGF 554
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
GR +H I + + + ++ MY KCG + +R +F+ + +++ ++ +I G +
Sbjct: 86 GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQ 145
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRY--------------- 294
+G +A+ L+ K L E +P F ++ AC+ V GK+
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205
Query: 295 ----------FNLMVDC----YGI-QPEMEHYGCMVDLLARAGLVDEAV-HLIETMT--- 335
FN M D YGI ++ + ++ ++ G EA+ HL E ++
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
Query: 336 VEPDPVLWATLLDAC----------KVHGFVDMGEKIGNKL 366
P+ ++ + L AC ++HG E GN +
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 221/442 (50%), Gaps = 38/442 (8%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
++++A+Y M+ + K + T L+A T + L G Q H ++K GF ++ V
Sbjct: 222 AKALALYKEMIFKG--FKIDMFTLASVLNALT--SLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+ LI Y +CG C + D+EKVF E+
Sbjct: 278 GSGLIDFYSKCGG----------------CDGMY----------------DSEKVFQEIL 305
Query: 133 ERDVVSWSTMIMGYVQNG-LLEDGLECFSVMREKGIRPNEXXXXXXXXX-XXXXXXXECG 190
D+V W+TMI GY N L E+ ++ F M+ G RP++ +C
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASH 250
+ I+S + V AL+ +Y K G ++ +R +F+ + + ++N MI G A H
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH 310
G +AL L+ + L G P +TFV VL+AC+ G V EG+ YFN M + + I+PE EH
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485
Query: 311 YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLD 370
Y CM+DLL RAG ++EA I+ M +P V WA LL AC+ H + + E+ N+L+ +
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQ 545
Query: 371 PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDH 430
P+ YV LA +YA ARKWE++ VRK M K +K G S +E++ H FVA D H
Sbjct: 546 PLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSH 605
Query: 431 DCSSDIYRMLETIGQGITAAGY 452
++ LE + + + GY
Sbjct: 606 PMIREVNEYLEEMMKKMKKVGY 627
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 26/312 (8%)
Query: 47 AASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVV 106
A L +G +HA VK A ++ N ++LY +CG + + EE +V
Sbjct: 20 AERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEE----PNVF 75
Query: 107 TWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG 166
++N ++ ++ +I A ++FDE+P+ D VS++T+I GY + F MR+ G
Sbjct: 76 SYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLG 135
Query: 167 IRPNEXXXXXXXXXXXXXXXXECGRF-----VHSTIESLKFRITVPVGTALVDMYAKCGC 221
+ C R +H S F V A V Y+K G
Sbjct: 136 FEVDGFTLSGLIAAC-------CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 222 IEKSRALFESISG-KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLN 280
+ ++ ++F + +D +WN MI H ALAL+ + + +GF T VLN
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 281 A-CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARA----GLVDEAVHLIETMT 335
A S+ L+ G R F+ + G ++D ++ G+ D E ++
Sbjct: 249 ALTSLDHLI--GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 336 VEPDPVLWATLL 347
PD V+W T++
Sbjct: 307 --PDLVVWNTMI 316
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 209/424 (49%), Gaps = 38/424 (8%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
++P+ H A +C + +G V H +K G+ DVFV ++L+ +Y +CG
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSV--HCLSMKTGYDADVFVGSSLVDMYAKCG---- 165
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
EI A K+FDEMP+R+VV+WS M+ GY Q
Sbjct: 166 -------------------------------EIVYARKMFDEMPQRNVVTWSGMMYGYAQ 194
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
G E+ L F + + N+ E GR +H F + V
Sbjct: 195 MGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFV 254
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
G++LV +Y+KCG E + +F + K++ WN M+ A H + + LF + G
Sbjct: 255 GSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGM 314
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAV 328
P +TF+ VLNACS GLV EG+ YF+ M + I+P +HY +VD+L RAG + EA+
Sbjct: 315 KPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEAL 373
Query: 329 HLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKAR 388
+I M ++P +W LL +C VH ++ +K+ +L P+ G ++ L+ YA
Sbjct: 374 EVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADG 433
Query: 389 KWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGIT 448
++ED + RKL+ ++ KK G S VE +H F AG++ H+ S +IY L +G+ +
Sbjct: 434 RFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEME 493
Query: 449 AAGY 452
AGY
Sbjct: 494 KAGY 497
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 158/379 (41%), Gaps = 73/379 (19%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G+Q+H +VVK G + V N LI+ Y +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPF-------------------------- 67
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
D+ + F++ P++ +WS++I + QN L LE M +RP++
Sbjct: 68 ---------DSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHV 118
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS 233
+ GR VH + V VG++LVDMYAKCG I +R +F+ +
Sbjct: 119 LPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP 178
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR 293
+++ TW+ M+ G A G ++AL LF + L E + +F V++ C+ L+ G++
Sbjct: 179 QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ 238
Query: 294 YFNL---------------MVDCY---GIQPEMEH-------------YGCMVDLLARAG 322
L +V Y G+ PE + + M+ A+
Sbjct: 239 IHGLSIKSSFDSSSFVGSSLVSLYSKCGV-PEGAYQVFNEVPVKNLGIWNAMLKAYAQHS 297
Query: 323 LVDEAVHLIETMTV---EPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ--LDPMHDGHY 377
+ + L + M + +P+ + + +L+AC G VD G +++ + ++P D HY
Sbjct: 298 HTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPT-DKHY 356
Query: 378 VQLAGIYAKARKWEDVVRV 396
L + +A + ++ + V
Sbjct: 357 ASLVDMLGRAGRLQEALEV 375
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 225/464 (48%), Gaps = 70/464 (15%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+++I M+R +P+++TF + C+ +GS VH V+++GF +DV V
Sbjct: 92 ETVSILMRMMRTG-LARPDEYTFPLVMKVCSNNGQVRVGS--SVHGLVLRIGFDKDVVVG 148
Query: 74 NALIHLYCECGSSVESFKRVFEE----------------------EEDTLCSDVV----- 106
+ + Y +C + S ++VF E EE D++
Sbjct: 149 TSFVDFYGKC-KDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNL 207
Query: 107 -TWNSVLAGVVRNGEIRDAEKVFDEMPERDVVS--------------------------- 138
+WN+++ G+V++G++ +A+K+FDEMP+RD++S
Sbjct: 208 GSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGV 267
Query: 139 ----WSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE-CGR-- 191
WS +I+GY QNG + + FS M K ++P+E E C +
Sbjct: 268 DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVD 327
Query: 192 -FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASH 250
++H + VP AL+DM AKCG ++++ LFE + +D+ ++ M+ G+A H
Sbjct: 328 SYLHQRMNKFSSHYVVP---ALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIH 384
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH 310
G +A+ LF K + EG +P V F +L C LV EG RYF LM Y I +H
Sbjct: 385 GCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDH 444
Query: 311 YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLD 370
Y C+V+LL+R G + EA LI++M E W +LL C +HG ++ E + L +L+
Sbjct: 445 YSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELE 504
Query: 371 PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLV 414
P G YV L+ IYA +W DV +R M E K+ G S +
Sbjct: 505 PQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 153/404 (37%), Gaps = 77/404 (19%)
Query: 101 LCSDVVTWNSVLAGVVRNGEIRDAE--------------------KVFDEMPERDVVSWS 140
LC + N + A ++R G +D VF+ +P W+
Sbjct: 19 LCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWN 78
Query: 141 TMIMGYVQNGLLEDGLECFSVMREKGI-RPNEXXXXXXXXXXXXXXXXECGRFVHSTIES 199
+I GY L + + M G+ RP+E G VH +
Sbjct: 79 HLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLR 138
Query: 200 LKFRITVPVGTALVDMYAKC-------------------------------GCIEKSRAL 228
+ F V VGT+ VD Y KC G +E+++++
Sbjct: 139 IGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSM 198
Query: 229 FESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLV 288
F+ + +++ +WN ++ GL G +A LF + I ++ +++ + GG +
Sbjct: 199 FDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDII----SYTSMIDGYAKGGDM 254
Query: 289 SEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM---TVEPDPVLWAT 345
+ F + G+ ++ + ++ A+ G +EA + M V+PD +
Sbjct: 255 VSARDLFE---EARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVG 309
Query: 346 LLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVS 405
L+ AC G ++ EK+ + L Q HYV A I A K + R KL E
Sbjct: 310 LMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNA-KCGHMDRAAKLFEEMPQ 368
Query: 406 KKVAGW-SLVELEGGIHHFVAGDKDHDCSSDIYRMLET-IGQGI 447
+ + + S++E G H C S+ R+ E + +GI
Sbjct: 369 RDLVSYCSMME----------GMAIHGCGSEAIRLFEKMVDEGI 402
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 216/439 (49%), Gaps = 37/439 (8%)
Query: 23 LRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCE 82
+R+ VK N +T AC R G Q+H V ++ D+F+ N+L+ +Y +
Sbjct: 265 MRQEGDVKVNSNTLAVMFKAC--RDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 83 CGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTM 142
G E+ K VF ++ D V+WNS++ G+V+ +I +A ++F++MP +D+VSW+ M
Sbjct: 323 LGYMGEA-KAVFGVMKN---KDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDM 378
Query: 143 IMGY-------------------------------VQNGLLEDGLECFSVMREKGIRPNE 171
I G+ V NG E+ L F M +K + PN
Sbjct: 379 IKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNS 438
Query: 172 XXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFES 231
G +H + + + V +LV MY KCG + +F
Sbjct: 439 YTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSC 498
Query: 232 ISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEG 291
IS +I ++N MI G + +G K AL LF S G P VTF+ +L+AC G V G
Sbjct: 499 ISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACK 351
+YF M Y I+P +HY CMVDLL R+GL+D+A +LI TM +P +W +LL A K
Sbjct: 559 WKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASK 618
Query: 352 VHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGW 411
H VD+ E KLI+L+P YV L+ +Y+ K D R+ + K KK G
Sbjct: 619 THLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGS 678
Query: 412 SLVELEGGIHHFVAGDKDH 430
S + L+G +H+F+AGD+
Sbjct: 679 SWIILKGEVHNFLAGDESQ 697
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 154/336 (45%), Gaps = 22/336 (6%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
RD N L+ Y G E+ RVF+ +VV+ +S++ G + G I DA +
Sbjct: 175 RDSVASNVLLSGYLRAGKWNEAV-RVFQ---GMAVKEVVSCSSMVHGYCKMGRIVDARSL 230
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG-IRPNEXXXXXXXXXXXXXXX 186
FD M ER+V++W+ MI GY + G EDG F MR++G ++ N
Sbjct: 231 FDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVR 290
Query: 187 XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICG 246
G +H + + + +G +L+ MY+K G + +++A+F + KD +WN +I G
Sbjct: 291 YREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITG 350
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
L +A LF K + V++ ++ S G +S+ V+ +G+ P
Sbjct: 351 LVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISK-------CVELFGMMP 399
Query: 307 EMEH--YGCMVDLLARAGLVDEAV---HLIETMTVEPDPVLWATLLDACKVHGFVDMGEK 361
E ++ + M+ G +EA+ H + V P+ ++++L A + G +
Sbjct: 400 EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQ 459
Query: 362 IGNKLIQLDPMHD-GHYVQLAGIYAKARKWEDVVRV 396
I ++++++ ++D L +Y K D ++
Sbjct: 460 IHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 39/163 (23%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
+N E++ + ML++ V PN +TF+ L A A L G+Q+H VVK+
Sbjct: 415 SNGYYEEALCWFHKMLQKE--VCPNSYTFSSVLSATASLA--DLIEGLQIHGRVVKMNIV 470
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
D+ V+N+L+ +YC+CG++ +++ K+
Sbjct: 471 NDLSVQNSLVSMYCKCGNTNDAY-----------------------------------KI 495
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN 170
F + E ++VS++TMI GY NG + L+ FS++ G PN
Sbjct: 496 FSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 39/275 (14%)
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL-LEDGLECFSVMR 163
+V+W ++++ NG++ A +VFDEMP R S++ MI ++N L E F +
Sbjct: 81 IVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP 140
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG-------------- 209
EK N + F+++ +KFR +V
Sbjct: 141 EK----NAVSYATMITGFVRAGRFDEAEFLYAET-PVKFRDSVASNVLLSGYLRAGKWNE 195
Query: 210 ----------------TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
+++V Y K G I +R+LF+ ++ +++ TW MI G G
Sbjct: 196 AVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFF 255
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVL-NACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
+D LF + EG + VN + V+ AC EG + L V ++ ++
Sbjct: 256 EDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL-VSRMPLEFDLFLGN 314
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
++ + ++ G + EA + M D V W +L+
Sbjct: 315 SLMSMYSKLGYMGEAKAVFGVMK-NKDSVSWNSLI 348
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 97/267 (36%), Gaps = 54/267 (20%)
Query: 97 EEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGL 156
E T + + NS ++ RNG +++AE +F +M R +VSW MI Y +NG +
Sbjct: 42 ETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAW 101
Query: 157 ECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMY 216
+ F + + R+T + M
Sbjct: 102 QVF--------------------------------------DEMPVRVTTSYNAMITAMI 123
Query: 217 AKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFH----KFLSEGFIPVN 272
+ K+ LF I K+ ++ MI G G +A L+ KF + N
Sbjct: 124 KNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDS--VASN 181
Query: 273 VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIE 332
V G L A G +E R F M E+ MV + G + +A L +
Sbjct: 182 VLLSGYLRA----GKWNEAVRVFQGMA-----VKEVVSCSSMVHGYCKMGRIVDARSLFD 232
Query: 333 TMTVEPDPVLWATLLDACKVHGFVDMG 359
MT E + + W ++D GF + G
Sbjct: 233 RMT-ERNVITWTAMIDGYFKAGFFEDG 258
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 200/414 (48%), Gaps = 38/414 (9%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V+ + F+ L AC LG Q+HA V KLG +V V L+ Y +C SS E
Sbjct: 281 VEWDSFVFSVVLKACASLEELNLGK--QIHACVAKLGLESEVSVGTPLVDFYIKC-SSFE 337
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
S R F+E IR E + VSWS +I GY Q
Sbjct: 338 SACRAFQE------------------------IR----------EPNDVSWSAIISGYCQ 363
Query: 149 NGLLEDGLECFSVMREKGIR-PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
E+ ++ F +R K N G VH+ +
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
+AL+ MY+KCGC++ + +FES+ DI W I G A +G A +AL LF K +S G
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 483
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
P +VTF+ VL ACS GLV +GK + M+ Y + P ++HY CM+D+ AR+GL+DEA
Sbjct: 484 MKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 543
Query: 328 VHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKA 387
+ ++ M EPD + W L C H +++GE G +L QLDP YV +Y A
Sbjct: 544 LKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWA 603
Query: 388 RKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLE 441
KWE+ + KLM E++ KK S ++ +G IH F+ GDK H + +IY L+
Sbjct: 604 GKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLK 657
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 170/424 (40%), Gaps = 77/424 (18%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
+++ ++S ML KP +T L + A L G Q+HAHV++ G + +
Sbjct: 167 KAVGLFSGMLASGD--KPPSSMYTTLLKSLVNPRA--LDFGRQIHAHVIRAGLCSNTSIE 222
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
++++Y +CG W L G A++VFD+M
Sbjct: 223 TGIVNMYVKCG-----------------------W---LVG---------AKRVFDQMAV 247
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+ V+ + +++GY Q G D L+ F + +G+ + G+ +
Sbjct: 248 KKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQI 307
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H+ + L V VGT LVD Y KC E + F+ I + +W+ +I G
Sbjct: 308 HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF 367
Query: 254 KDALALFHKFLSEGFIPVN-VTFVGVLNACS------MGGLVSEGKRYFNLMVDCYGIQP 306
++A+ F S+ +N T+ + ACS +GG V +L+ YG
Sbjct: 368 EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA 427
Query: 307 EMEHY---GCMVDLL---------------------ARAGLVDEAVHLIETMT---VEPD 339
+ Y GC+ D A G EA+ L E M ++P+
Sbjct: 428 LITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPN 487
Query: 340 PVLWATLLDACKVHGFVDMGEKIGNKLIQ---LDPMHDGHYVQLAGIYAKARKWEDVVRV 396
V + +L AC G V+ G+ + +++ + P D HY + IYA++ ++ ++
Sbjct: 488 SVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTID-HYDCMIDIYARSGLLDEALKF 546
Query: 397 RKLM 400
K M
Sbjct: 547 MKNM 550
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 139/329 (42%), Gaps = 42/329 (12%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR-DVFVRNALIHLYCECGSSV 87
V + +++ AC R L G +H + ++G V ++N ++ +YCEC S
Sbjct: 79 VSVSSYSYQCLFEAC--RELRSLSHGRLLHDRM-RMGIENPSVLLQNCVLQMYCECRS-- 133
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYV 147
+ DA+K+FDEM E + VS +TMI Y
Sbjct: 134 ---------------------------------LEDADKLFDEMSELNAVSRTTMISAYA 160
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
+ G+L+ + FS M G +P + GR +H+ +
Sbjct: 161 EQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTS 220
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
+ T +V+MY KCG + ++ +F+ ++ K ++ G G A+DAL LF ++EG
Sbjct: 221 IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG 280
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
+ F VL AC+ ++ GK+ + V G++ E+ +VD + + A
Sbjct: 281 VEWDSFVFSVVLKACASLEELNLGKQ-IHACVAKLGLESEVSVGTPLVDFYIKCSSFESA 339
Query: 328 VHLIETMTVEPDPVLWATLLDA-CKVHGF 355
+ + EP+ V W+ ++ C++ F
Sbjct: 340 CRAFQEIR-EPNDVSWSAIISGYCQMSQF 367
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 213/396 (53%), Gaps = 12/396 (3%)
Query: 56 QVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGV 115
+VH +V+K GF + RNALIH+Y + G V+ + +F + + + +WNS++
Sbjct: 315 KVHGYVIKGGFEEYLPSRNALIHVYGKQGK-VKDAEHLFRQIRN---KGIESWNSLITSF 370
Query: 116 VRNGEIRDAEKVFDEMPERD--------VVSWSTMIMGYVQNGLLEDGLECFSVMREKGI 167
V G++ +A +F E+ E + VV+W+++I G G +D LE F M+ +
Sbjct: 371 VDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKV 430
Query: 168 RPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRA 227
N GR +H + + V ALV+MYAKCG + +
Sbjct: 431 LANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSL 490
Query: 228 LFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGL 287
+FE+I KD+ +WN +I G HG A+ AL++F + +S GF P + V VL+ACS GL
Sbjct: 491 VFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGL 550
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
V +G+ F M +G++P+ EHY C+VDLL R G + EA +++ M +EP + LL
Sbjct: 551 VEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALL 610
Query: 348 DACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKK 407
++C++H VD+ E I ++L L+P G Y+ L+ IY+ +WE+ VR L +K KK
Sbjct: 611 NSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKK 670
Query: 408 VAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETI 443
V+G S +E++ + F +G IY +LE +
Sbjct: 671 VSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDL 706
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 161/403 (39%), Gaps = 51/403 (12%)
Query: 15 SIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRN 74
++ +Y M R+R + + + L AC GL H V+++G ++ V N
Sbjct: 142 ALELYRGM--RQRGLTGDGYILPLILRACRYLGRFGLCRAF--HTQVIQIGLKENLHVVN 197
Query: 75 ALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER 134
L+ LY + G +++ E + ++WN ++ G + + A K+F+ M
Sbjct: 198 ELLTLYPKAGRMGDAYNLFVEMP----VRNRMSWNVMIKGFSQEYDCESAVKIFEWMQRE 253
Query: 135 ----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECG 190
D V+W++++ + Q G ED L+ F +MR G +
Sbjct: 254 EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIA 313
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASH 250
VH + F +P AL+ +Y K G ++ + LF I K I +WN +I
Sbjct: 314 EKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDA 373
Query: 251 GLAKDALALFHKFLSEGF---IPVN-VTFVGVLNACSMGGLVSEGKRYF----------- 295
G +AL+LF + + N VT+ V+ C++ G + YF
Sbjct: 374 GKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLAN 433
Query: 296 -----------------NLMVDCYG--IQPEMEH----YGCMVDLLARAGLVDEAVHLIE 332
NL + +G I+ M +V++ A+ GL+ E + E
Sbjct: 434 SVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFE 493
Query: 333 TMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG 375
+ + D + W +++ +HGF + + +++I DG
Sbjct: 494 AIR-DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG 535
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 8/208 (3%)
Query: 99 DTLCSDVVTWNSVLAG-----VVRNGEIRDAEKVFDEMPE---RDVVSWSTMIMGYVQNG 150
L SD + + LA R G + DA VF+ + D+ W++++ V +G
Sbjct: 78 QVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHG 137
Query: 151 LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGT 210
L E+ LE + MR++G+ + R H+ + + + + V
Sbjct: 138 LYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVN 197
Query: 211 ALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIP 270
L+ +Y K G + + LF + ++ +WNVMI G + + A+ +F E F P
Sbjct: 198 ELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKP 257
Query: 271 VNVTFVGVLNACSMGGLVSEGKRYFNLM 298
VT+ VL+ S G + +YF+LM
Sbjct: 258 DEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 23 LRRRRFVK--PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLY 80
R+ +F K N T L C + A LG ++H HV++ + ++ V+NAL+++Y
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGR--EIHGHVIRTSMSENILVQNALVNMY 479
Query: 81 CECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DV 136
+CG E VFE D D+++WNS++ G +G A +FD M D
Sbjct: 480 AKCGLLSEG-SLVFEAIRD---KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG 535
Query: 137 VSWSTMIMGYVQNGLLEDGLECFSVMREK-GIRPNE 171
++ ++ GL+E G E F M ++ G+ P +
Sbjct: 536 IALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQ 571
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 229/456 (50%), Gaps = 51/456 (11%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHA--CTKRAASGLGSGVQVHAHVVKLGF 66
+S ++++I+ M R V PN+ TF ++A C ++ GL ++H +K GF
Sbjct: 350 SSNKDDAVSIFLNM--RFDGVYPNEVTFVGLINAVKCNEQIKEGL----KIHGLCIKTGF 403
Query: 67 ARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEK 126
+ V N+ I LY + FE ED A+K
Sbjct: 404 VSEPSVGNSFITLYAK-----------FEALED------------------------AKK 428
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX--XXXXXXXXXXX 184
F+++ R+++SW+ MI G+ QNG + L+ F + + PNE
Sbjct: 429 AFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAED 487
Query: 185 XXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMI 244
+ G+ H+ + L V +AL+DMYAK G I++S +F +S K+ + W +I
Sbjct: 488 ISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSII 547
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGI 304
+SHG + + LFHK + E P VTF+ VL AC+ G+V +G FN+M++ Y +
Sbjct: 548 SAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNL 607
Query: 305 QPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGN 364
+P EHY CMVD+L RAG + EA L+ + P + ++L +C++HG V MG K+
Sbjct: 608 EPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAE 667
Query: 365 KLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVEL---EGGI- 420
+++ P G YVQ+ IYA+ +W+ +RK M +K K AG+S +++ EG +
Sbjct: 668 LAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLT 727
Query: 421 -HHFVAGDKDHDCSSDIYRMLETIGQGITAAGYPSV 455
F +GDK H S +IYRM+E IG + G +V
Sbjct: 728 MQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKVAV 763
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 174/424 (41%), Gaps = 98/424 (23%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ I+ M+R V+ + +FT + C + L Q+H +K G+ + V
Sbjct: 259 EAVVIFRDMMREG--VELDHVSFTSVITTCCHE--TDLKLARQIHGLCIKRGYESLLEVG 314
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N L+ Y +CG VL V + VF +M E
Sbjct: 315 NILMSRYSKCG--------------------------VLEAV---------KSVFHQMSE 339
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
R+VVSW+TMI + +D + F MR G+ PNE + G +
Sbjct: 340 RNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H F VG + + +YAK +E ++ FE I+ ++I +WN MI G A +G +
Sbjct: 395 HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFS 454
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVS--EGKRYFNLMVDCYGIQPEMEHY 311
+AL +F +E +P TF VLNA + +S +G+R C+ ++
Sbjct: 455 HEALKMFLSAAAET-MPNEYTFGSVLNAIAFAEDISVKQGQR-------CHAHLLKLGLN 506
Query: 312 GC------MVDLLARAGLVDEAVHLIETMT------------------------------ 335
C ++D+ A+ G +DE+ + M+
Sbjct: 507 SCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKM 566
Query: 336 ----VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ---LDPMHDGHYVQLAGIYAKAR 388
V PD V + ++L AC G VD G +I N +I+ L+P H+ HY + + +A
Sbjct: 567 IKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE-HYSCMVDMLGRAG 625
Query: 389 KWED 392
+ ++
Sbjct: 626 RLKE 629
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 12/258 (4%)
Query: 101 LCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFS 160
L SD+V NS + R+G R A +VFDEM +D++SW++++ G Q G G E
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF--GFEAVV 262
Query: 161 VMRE---KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYA 217
+ R+ +G+ + + R +H + + VG L+ Y+
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYS 322
Query: 218 KCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVG 277
KCG +E +++F +S +++ +W MI DA+++F +G P VTFVG
Sbjct: 323 KCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVG 377
Query: 278 VLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE 337
++NA + EG + L + G E + L A+ +++A E +T
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKT-GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR 436
Query: 338 PDPVLWATLLDACKVHGF 355
+ + W ++ +GF
Sbjct: 437 -EIISWNAMISGFAQNGF 453
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 142/344 (41%), Gaps = 46/344 (13%)
Query: 10 SPPSESIAIYSAMLRRRRFVKP-NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
+ P+ +++I+ L+ F + ++ T AL AC L G Q+H GF
Sbjct: 54 NSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR----GDLKRGCQIHGFSTTSGFTS 109
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
V V NA++ +Y + G ++ LC +F
Sbjct: 110 FVCVSNAVMGMYRKAG-----------RFDNALC------------------------IF 134
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+ + + DVVSW+T++ G+ N + L M+ G+ +
Sbjct: 135 ENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G + ST+ + VG + + MY++ G +R +F+ +S KD+ +WN ++ GL+
Sbjct: 192 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS 251
Query: 249 SHG-LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
G +A+ +F + EG +V+F V+ C + ++ L + G +
Sbjct: 252 QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIK-RGYESL 310
Query: 308 MEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACK 351
+E ++ ++ G++ EAV + E + V W T++ + K
Sbjct: 311 LEVGNILMSRYSKCGVL-EAVKSVFHQMSERNVVSWTTMISSNK 353
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 216/450 (48%), Gaps = 42/450 (9%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P E+I + RR PN TF L+AC+ LG +Q+H V++ GF DV
Sbjct: 190 PREAIEAFIEF--RRIDGHPNSITFCAFLNACSDWLHLNLG--MQLHGLVLRSGFDTDVS 245
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V N LI Y +C +IR +E +F EM
Sbjct: 246 VCNGLIDFYGKCK-----------------------------------QIRSSEIIFTEM 270
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
++ VSW +++ YVQN E + R+ + ++ E GR
Sbjct: 271 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 330
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+H+ T+ VG+ALVDMY KCGCIE S F+ + K++ T N +I G A G
Sbjct: 331 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 390
Query: 252 LAKDALALFHKFLSEGF--IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
ALALF + G P +TFV +L+ACS G V G + F+ M YGI+P E
Sbjct: 391 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAE 450
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
HY C+VD+L RAG+V+ A I+ M ++P +W L +AC++HG +G L +L
Sbjct: 451 HYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKL 510
Query: 370 DPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKD 429
DP G++V L+ +A A +W + VR+ + KK AG+S + ++ +H F A D+
Sbjct: 511 DPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRS 570
Query: 430 HDCSSDIYRMLETIGQGITAAGY-PSVHLT 458
H + +I L + + AAGY P + L+
Sbjct: 571 HILNKEIQTTLAKLRNEMEAAGYKPDLKLS 600
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 123/298 (41%), Gaps = 25/298 (8%)
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
A V P R+VVSW+++I G QNG L F MR +G+ PN+
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 120
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVM 243
G+ +H+ + V VG + DMY K + +R LF+ I +++ TWN
Sbjct: 121 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAF 180
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG 303
I + G ++A+ F +F P ++TF LNACS ++ G + L++ G
Sbjct: 181 ISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS-G 239
Query: 304 IQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIG 363
++ ++D + + + +I T + V W +L+ A V D +
Sbjct: 240 FDTDVSVCNGLIDFYGKCKQI-RSSEIIFTEMGTKNAVSWCSLV-AAYVQNHEDEKASV- 296
Query: 364 NKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIH 421
+Y ++RK D+V MI V AG + +EL IH
Sbjct: 297 -------------------LYLRSRK--DIVETSDFMISSVLSACAGMAGLELGRSIH 333
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 149/413 (36%), Gaps = 80/413 (19%)
Query: 15 SIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLG---SGVQVHAHVVKLGFARDVF 71
S A+ RR V PN TF C +A + L +G Q+HA VK G DVF
Sbjct: 90 STALVEFFEMRREGVVPNDFTF-----PCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V + +YC+ T D DA K+FDE+
Sbjct: 145 VGCSAFDMYCK-----------------TRLRD------------------DARKLFDEI 169
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
PER++ +W+ I V +G + +E F R PN G
Sbjct: 170 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 229
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+H + F V V L+D Y KC I S +F + K+ +W ++ +
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 289
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACS-MGGL--------------VSEGKRYFN 296
+ A L+ + + + VL+AC+ M GL V +
Sbjct: 290 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 349
Query: 297 LMVDCYGI-------------QPE--MEHYGCMVDLLARAGLVDEAVHLIETMTVE---- 337
+VD YG PE + ++ A G VD A+ L E M
Sbjct: 350 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 409
Query: 338 -PDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG--HYVQLAGIYAKA 387
P+ + + +LL AC G V+ G KI + + + G HY + + +A
Sbjct: 410 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Query: 190 GRFVHSTI-ESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
GR VH+ I ++L + L++MY+K E +R + +++ +W +I GLA
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
+G AL F + EG +P + TF A + L GK+ L V C I
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 309 EHYGCMV-DLLARAGLVDEAVHLIETM 334
GC D+ + L D+A L + +
Sbjct: 145 --VGCSAFDMYCKTRLRDDARKLFDEI 169
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 211/380 (55%), Gaps = 7/380 (1%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
+D+ + N L+ Y E G S E+ + + + + + +V+TWN ++ ++RNG++ +A+ +
Sbjct: 439 KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDM 498
Query: 128 FDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
F +M +++SW+TM+ G VQNG E+ + M+E G+RPN
Sbjct: 499 FLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAH 558
Query: 184 XXXXECGRFVHS-TIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNV 242
GR +H I +L+ V + T+LVDMYAKCG I K+ +F S ++ N
Sbjct: 559 LASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNA 618
Query: 243 MICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
MI A +G K+A+AL+ G P N+T VL+AC+ G +++ F +V
Sbjct: 619 MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKR 678
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKI 362
++P +EHYG MVDLLA AG ++A+ LIE M +PD + +L+ +C ++ + +
Sbjct: 679 SMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYL 738
Query: 363 GNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEG--GI 420
KL++ +P + G+YV ++ YA W++VV++R++M K KK G S +++ G G+
Sbjct: 739 SRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGV 798
Query: 421 HHFVAGDKDHDCSSDIYRML 440
H FVA DK H ++I ML
Sbjct: 799 HVFVANDKTHTRINEIQMML 818
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 147/333 (44%), Gaps = 53/333 (15%)
Query: 27 RFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSS 86
FV PN AC S G GV H +VVK G VFV ++L +Y +CG
Sbjct: 173 NFVVPN------VCKACGALKWSRFGRGV--HGYVVKSGLEDCVFVASSLADMYGKCGV- 223
Query: 87 VESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGY 146
+ DA KVFDE+P+R+ V+W+ +++GY
Sbjct: 224 ----------------------------------LDDASKVFDEIPDRNAVAWNALMVGY 249
Query: 147 VQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITV 206
VQNG E+ + FS MR++G+ P E G+ H+ +
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309
Query: 207 PVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSE 266
+GT+L++ Y K G IE + +F+ + KD+ TWN++I G GL +DA+ + E
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 267 GFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH----YGCMVDLLARAG 322
VT +++A + + GK V CY I+ E ++D+ A+ G
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKE-----VQCYCIRHSFESDIVLASTVMDMYAKCG 424
Query: 323 LVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
+ +A + ++ TVE D +LW TLL A G
Sbjct: 425 SIVDAKKVFDS-TVEKDLILWNTLLAAYAESGL 456
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 158/363 (43%), Gaps = 43/363 (11%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E+I ++S M R++ V+P + T + L A G+ G Q HA + G
Sbjct: 252 NGKNEEAIRLFSDM--RKQGVEPTRVTVSTCLSASANMG--GVEEGKQSHAIAIVNGMEL 307
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D + +L++ YC+ G I AE VF
Sbjct: 308 DNILGTSLLNFYCKVGL-----------------------------------IEYAEMVF 332
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
D M E+DVV+W+ +I GYVQ GL+ED + +MR + ++ + +
Sbjct: 333 DRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK 392
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G+ V F + + + ++DMYAKCG I ++ +F+S KD+ WN ++ A
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYA 452
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
GL+ +AL LF+ EG P +T+ ++ + G V E K F L + GI P +
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNL 511
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNK 365
+ M++ + + G +EA+ + M + P+ L AC + +G I
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY 571
Query: 366 LIQ 368
+I+
Sbjct: 572 IIR 574
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 143/351 (40%), Gaps = 43/351 (12%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLG--F 66
N E++++ + M R + P + L C L +G Q+HA ++K G +
Sbjct: 48 NGEIKEALSLVTEMDFRNLRIGP--EIYGEILQGCVYE--RDLSTGKQIHARILKNGDFY 103
Query: 67 ARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEK 126
AR+ ++ L+ Y +C + + AE
Sbjct: 104 ARNEYIETKLVIFYAKCDA-----------------------------------LEIAEV 128
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
+F ++ R+V SW+ +I + GL E L F M E I P+
Sbjct: 129 LFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKW 188
Query: 187 XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICG 246
GR VH + V V ++L DMY KCG ++ + +F+ I ++ WN ++ G
Sbjct: 189 SRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVG 248
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
+G ++A+ LF +G P VT L+A + G V EGK+ + + G++
Sbjct: 249 YVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI-VNGMEL 307
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
+ +++ + GL++ A + + M E D V W ++ G V+
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRM-FEKDVVTWNLIISGYVQQGLVE 357
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 207/390 (53%), Gaps = 40/390 (10%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V+PN T+ L + + LG G+ H ++K + NALI +Y +C
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGI--HGLILKRASLISLETGNALIDMYVKCE---- 253
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
++ DA +VF E+ ++D VSW++MI G V
Sbjct: 254 -------------------------------QLSDAMRVFGELEKKDKVSWNSMISGLVH 282
Query: 149 NGLLEDGLECFSVMR-EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
++ ++ FS+M+ GI+P+ + GR+VH I + +
Sbjct: 283 CERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTH 342
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
+GTA+VDMYAKCG IE + +F I K+++TWN ++ GLA HG ++L F + + G
Sbjct: 343 IGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG 402
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC-YGIQPEMEHYGCMVDLLARAGLVDE 326
F P VTF+ LNAC GLV EG+RYF+ M Y + P++EHYGCM+DLL RAGL+DE
Sbjct: 403 FKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDE 462
Query: 327 AVHLIETMTVEPDPVLWATLLDACKVHG-FVDMGEKIGNKLIQLDPMHDGHYVQLAGIYA 385
A+ L++ M V+PD + +L ACK G +++ ++I + + ++ G YV L+ I+A
Sbjct: 463 ALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFA 522
Query: 386 KARKWEDVVRVRKLMIEKVSKKVAGWSLVE 415
R+W+DV R+R+LM K KV G S +E
Sbjct: 523 ANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 144/325 (44%), Gaps = 43/325 (13%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
P+ TF AC K SG+ G Q+H V K+GF D++V+N+L+H Y CG S
Sbjct: 104 PDMFTFPPVFKACGK--FSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGES---- 157
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
R+A KVF EMP RDVVSW+ +I G+ + G
Sbjct: 158 -------------------------------RNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 151 LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGT 210
L ++ L+ FS M + PN G+ +H I I++ G
Sbjct: 187 LYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 211 ALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKF-LSEGFI 269
AL+DMY KC + + +F + KD +WN MI GL +K+A+ LF S G
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIK 303
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
P VL+AC+ G V G R+ + + GI+ + +VD+ A+ G ++ A+
Sbjct: 304 PDGHILTSVLSACASLGAVDHG-RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 330 LIETMTVEPDPVLWATLLDACKVHG 354
+ + + W LL +HG
Sbjct: 363 IFNGIR-SKNVFTWNALLGGLAIHG 386
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+I ++S M + +KP+ H T L AC A + G VH +++ G D +
Sbjct: 288 EAIDLFSLM-QTSSGIKPDGHILTSVLSACASLGA--VDHGRWVHEYILTAGIKWDTHIG 344
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP- 132
A++ +Y +CG +E+ +F +V TWN++L G+ +G ++ + F+EM
Sbjct: 345 TAIVDMYAKCG-YIETALEIFNGIRS---KNVFTWNALLGGLAIHGHGLESLRYFEEMVK 400
Query: 133 ---ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREK 165
+ ++V++ + GL+++G F M+ +
Sbjct: 401 LGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSR 436
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 101/266 (37%), Gaps = 43/266 (16%)
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
G+ +H + + F + V +LV Y CG + +F + +D+ +W +I G
Sbjct: 125 GKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTR 184
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK----------------- 292
GL K+AL F K E P T+V VL + G +S GK
Sbjct: 185 TGLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLET 241
Query: 293 --RYFNLMVDCYGIQPEMEHYG-----------CMVDLLARAGLVDEAVHLIETMT---- 335
++ V C + M +G M+ L EA+ L M
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 336 VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHY-VQLAGIYAKARKWEDVV 394
++PD + ++L AC G VD G + ++ D H + +YAK E +
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 395 RVRKLMIEKVSKKVAGWSLVELEGGI 420
+ + SK V W+ L GG+
Sbjct: 362 EIFNGI---RSKNVFTWN--ALLGGL 382
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 220/431 (51%), Gaps = 39/431 (9%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGF--ARDV 70
S+++ + M +P++ T T L AC+ + + +G Q+H +V+ GF
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACS--STGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 71 FVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDE 130
+ +L+ LY +CG + A K FD+
Sbjct: 248 TITGSLVDLYVKCGY-----------------------------------LFSARKAFDQ 272
Query: 131 MPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECG 190
+ E+ ++SWS++I+GY Q G + + F ++E + + G
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASH 250
+ + + L + V ++VDMY KCG ++++ F + KD+ +W V+I G H
Sbjct: 333 KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 392
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH 310
GL K ++ +F++ L P V ++ VL+ACS G++ EG+ F+ +++ +GI+P +EH
Sbjct: 393 GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH 452
Query: 311 YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLD 370
Y C+VDLL RAG + EA HLI+TM ++P+ +W TLL C+VHG +++G+++G L+++D
Sbjct: 453 YACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 512
Query: 371 PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDH 430
+ +YV ++ +Y +A W + R+L K KK AG S VE+E +H F +G+ H
Sbjct: 513 AKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSH 572
Query: 431 DCSSDIYRMLE 441
+ I L+
Sbjct: 573 PLTPVIQETLK 583
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 139/322 (43%), Gaps = 44/322 (13%)
Query: 31 PNQ-HTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVES 89
PNQ L CT++ S G QVH +++K G ++ N LI +YC+C + +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGG--QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN 149
+K VFD MPER+VVSWS ++ G+V N
Sbjct: 61 YK-----------------------------------VFDSMPERNVVSWSALMSGHVLN 85
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
G L+ L FS M +GI PNE E G +H + F + V VG
Sbjct: 86 GDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVG 145
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
+LVDMY+KCG I ++ +F I + + +WN MI G G AL F + E I
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF-GMMQEANI 204
Query: 270 ---PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC-YGIQPEMEHYGCMVDLLARAGLVD 325
P T +L ACS G++ GK+ +V + G +VDL + G +
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 326 EAVHLIETMTVEPDPVLWATLL 347
A + + E + W++L+
Sbjct: 265 SARKAFDQIK-EKTMISWSSLI 285
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 164/399 (41%), Gaps = 80/399 (20%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N S++++S M R+ + PN+ TF+ L AC A L G+Q+H +K+GF
Sbjct: 85 NGDLKGSLSLFSEM--GRQGIYPNEFTFSTNLKACGLLNA--LEKGLQIHGFCLKIGFEM 140
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
V V N+L+ +Y +CG I +AEKVF
Sbjct: 141 MVEVGNSLVDMYSKCG-----------------------------------RINEAEKVF 165
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGI--RPNEXXXXXXXXXXXXXXX 186
+ +R ++SW+ MI G+V G L+ F +M+E I RP+E
Sbjct: 166 RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM 225
Query: 187 XECGRFVHSTIESLKFRI--TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMI 244
G+ +H + F + + +LVD+Y KCG + +R F+ I K + +W+ +I
Sbjct: 226 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLI 285
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC-YG 303
G A G +A+ LF + + ++ + L+ +GK+ L V G
Sbjct: 286 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 345
Query: 304 IQPEMEHYGCMVDLLARAGLVDEAVHLIETM----------------------------- 334
++ + +VD+ + GLVDEA M
Sbjct: 346 LETSV--LNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFY 403
Query: 335 -----TVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
+EPD V + +L AC G + GE++ +KL++
Sbjct: 404 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 204/418 (48%), Gaps = 37/418 (8%)
Query: 35 TFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVF 94
T+ + T+ A G G+ H++ +K G D+ V NALI +Y +C
Sbjct: 410 TYLMLISVSTRLADLKFGKGL--HSNGIKSGICIDLSVSNALIDMYAKC----------- 456
Query: 95 EEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLED 154
GE+ D+ K+F M D V+W+T+I V+ G
Sbjct: 457 ------------------------GEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 155 GLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVD 214
GL+ + MR+ + P+ G+ +H + + + +G AL++
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 215 MYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVT 274
MY+KCGC+E S +FE +S +D+ TW MI +G + AL F G +P +V
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 275 FVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
F+ ++ ACS GLV EG F M Y I P +EHY C+VDLL+R+ + +A I+ M
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672
Query: 335 TVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVV 394
++PD +WA++L AC+ G ++ E++ ++I+L+P G+ + + YA RKW+ V
Sbjct: 673 PIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVS 732
Query: 395 RVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
+RK + +K K G+S +E+ +H F +GD S IY+ LE + + GY
Sbjct: 733 LIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 155/360 (43%), Gaps = 48/360 (13%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IR +K P E++ Y + R V P+++TF + AC + +G V+
Sbjct: 77 IIRAFSKNGLFP-EALEFYGKL--RESKVSPDKYTFPSVIKACAGLFDAEMGD--LVYEQ 131
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
++ +GF D+FV NAL+ +Y R G
Sbjct: 132 ILDMGFESDLFVGNALVDMYS-----------------------------------RMGL 156
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ A +VFDEMP RD+VSW+++I GY +G E+ LE + ++ I P+
Sbjct: 157 LTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
+ G+ +H V V LV MY K +R +F+ + +D ++
Sbjct: 217 FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY 276
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N MICG + ++++ +F + L + F P +T VL AC +S K +N M+
Sbjct: 277 NTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
G E ++D+ A+ G + A + +M + D V W ++ + G++ G+
Sbjct: 336 A-GFVLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSI-----ISGYIQSGD 388
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 40/249 (16%)
Query: 47 AASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYC---ECGSSVESFKRVFEEEEDTLCS 103
++S L ++HA V+ LG F LI Y E SS+ F+RV
Sbjct: 16 SSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV---------- 65
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
P ++V W+++I + +NGL + LE + +R
Sbjct: 66 ---------------------------SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLR 98
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
E + P++ E G V+ I + F + VG ALVDMY++ G +
Sbjct: 99 ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLT 158
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
++R +F+ + +D+ +WN +I G +SHG ++AL ++H+ + +P + T VL A
Sbjct: 159 RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG 218
Query: 284 MGGLVSEGK 292
+V +G+
Sbjct: 219 NLLVVKQGQ 227
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
R+ V P+ TF L C AA LG ++H +++ G+ ++ + NALI +Y +CG
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGK--EIHCCLLRFGYESELQIGNALIEMYSKCG 558
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIM 144
+E+ RVFE DVVTW ++ GE A + F +M + +V S + +
Sbjct: 559 -CLENSSRVFERMSR---RDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFI 614
Query: 145 GYV----QNGLLEDGLECFSVMR 163
+ +GL+++GL CF M+
Sbjct: 615 AIIYACSHSGLVDEGLACFEKMK 637
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS-GKDIWTWNVMICGLAS 249
R +H+ + SL + L+D Y+ S ++F +S K+++ WN +I +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS------MGGLVSEGKRYFNLMVDCYG 303
+GL +AL + K P TF V+ AC+ MG LV E ++D G
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ------ILDM-G 136
Query: 304 IQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIG 363
+ ++ +VD+ +R GL+ A + + M V D V W +L+ HG+ + +I
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHGYYEEALEIY 195
Query: 364 NKL 366
++L
Sbjct: 196 HEL 198
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 203/414 (49%), Gaps = 38/414 (9%)
Query: 48 ASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVT 107
AS + G +H + ++ GF + + ALI +Y ECG
Sbjct: 343 ASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECG----------------------- 379
Query: 108 WNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGI 167
+++ AE +FD M E++V+SW+++I YVQNG LE F + + +
Sbjct: 380 ------------QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSL 427
Query: 168 RPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRA 227
P+ GR +H+ I ++ + +LV MYA CG +E +R
Sbjct: 428 VPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARK 487
Query: 228 LFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGL 287
F I KD+ +WN +I A HG + ++ LF + ++ P TF +L ACS+ G+
Sbjct: 488 CFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGM 547
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
V EG YF M YGI P +EHYGCM+DL+ R G A +E M P +W +LL
Sbjct: 548 VDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Query: 348 DACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKK 407
+A + H + + E ++ +++ + G YV L +YA+A +WEDV R++ LM K +
Sbjct: 608 NASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISR 667
Query: 408 VAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGYPSVHLTCVA 461
+ S VE +G H F GD+ H ++ IY +L+ + + + G +++ CV+
Sbjct: 668 TSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMV---GEEDIYVHCVS 718
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 178/447 (39%), Gaps = 109/447 (24%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA------ 67
E++ YS M+ F TFT+ + S L G ++HA V+KLGF
Sbjct: 113 EAVQFYSRMV----FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVC 168
Query: 68 -------------------------RDVFVRNALIHLYCECG---SSVESFKRVFE---- 95
RD+ N++I Y G SS+ FK + +
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228
Query: 96 -EEEDTL-----CS-----------------------DVVTWNSVLAGVVRNGEIRDAEK 126
+ T+ CS DV+ S+L + GE+ AE+
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREK-GIRPNEXXXXXXXXXXXXXX 185
+F+ M +R++V+W+ MI Y +NG + D CF M E+ G++P+
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348
Query: 186 XXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMIC 245
GR +H F + + TAL+DMY +CG ++ + +F+ ++ K++ +WN +I
Sbjct: 349 ----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIA 404
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK---------RYF- 295
+G AL LF + +P + T +L A + +SEG+ RY+
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS 464
Query: 296 -----NLMVDCYGIQPEME---------------HYGCMVDLLARAGLVDEAVHLIETMT 335
N +V Y + ++E + ++ A G +V L M
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 336 ---VEPDPVLWATLLDACKVHGFVDMG 359
V P+ +A+LL AC + G VD G
Sbjct: 525 ASRVNPNKSTFASLLAACSISGMVDEG 551
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 11/250 (4%)
Query: 112 LAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNE 171
L G + + DA ++FDEM + D W+ MI G+ GL + ++ +S M G++ +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 172 XXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFES 231
E G+ +H+ + L F V V +L+ +Y K GC + +FE
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 232 ISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEG 291
+ +DI +WN MI G + G +L LF + L GF P + + L ACS G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMV-----DLLARAGLVDEAVHLIETMTVEPDPVLWATL 346
K + C+ ++ +E MV D+ ++ G V A + M ++ + V W +
Sbjct: 251 KE-----IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVM 304
Query: 347 LDACKVHGFV 356
+ +G V
Sbjct: 305 IGCYARNGRV 314
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 214/406 (52%), Gaps = 15/406 (3%)
Query: 15 SIAIYSAMLRRRRFVKPNQHTF-TFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
S+A+++ ML V+PN TF + AC+ + S GV +H +K GF D FV+
Sbjct: 70 SLALFTHMLASH--VQPNNLTFPSLIKAACSSFSVS---YGVALHGQALKRGFLWDPFVQ 124
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
+ + Y E G +ES +++F+ D L VV NS+L RNGE+ A + F MP
Sbjct: 125 TSFVRFYGEVGD-LESSRKMFD---DILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPV 180
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG---IRPNEXXXXXXXXXXXXXXX--XE 188
DVVSW+T+I G+ + GL L F M + I PNE
Sbjct: 181 TDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIR 240
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G+ +H + S + +T +GTAL+DMY K G +E + +F+ I K + WN +I LA
Sbjct: 241 LGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALA 300
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
S+G K AL +F S P +T + +L AC+ LV G + F+ + Y I P
Sbjct: 301 SNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTS 360
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
EHYGC+VDL+ RAGL+ +A + I+++ EPD + LL ACK+H ++G +G +LI
Sbjct: 361 EHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIG 420
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLV 414
L P H G YV L+ A W + ++RK MIE +K+ +S++
Sbjct: 421 LQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 203/401 (50%), Gaps = 39/401 (9%)
Query: 15 SIAIYSAMLRRR-RFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKL--GFARDVF 71
+ ++Y +L R FV+PN+ T+ +L + A G +HAHV+K D F
Sbjct: 93 AFSLYDQILSSRSNFVRPNEFTYP-SLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRF 151
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V+ AL+ Y CG ++R+A +F+ +
Sbjct: 152 VQAALVGFYANCG-----------------------------------KLREARSLFERI 176
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
E D+ +W+T++ Y + ++ E + +RPNE G
Sbjct: 177 REPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGV 236
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+ H + + VGT+L+D+Y+KCGC+ +R +F+ +S +D+ +N MI GLA HG
Sbjct: 237 WAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHG 296
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
++ + L+ +S+G +P + TFV ++ACS GLV EG + FN M YGI+P++EHY
Sbjct: 297 FGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHY 356
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDP 371
GC+VDLL R+G ++EA I+ M V+P+ LW + L + + HG + GE L+ L+
Sbjct: 357 GCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEF 416
Query: 372 MHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
+ G+YV L+ IYA +W DV + R+LM + K G S
Sbjct: 417 ENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 215/441 (48%), Gaps = 38/441 (8%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P +++A + M R V N T L AC L G +HA++V GF D
Sbjct: 427 PDKALAAFQTM--RVEGVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIVSAGFESDEH 483
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V+N+LI +Y +CG ++ ++ +F+ +
Sbjct: 484 VKNSLITMYAKCG-----------------------------------DLSSSQDLFNGL 508
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
R++++W+ M+ +G E+ L+ S MR G+ ++ E G+
Sbjct: 509 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 568
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+H L F + A DMY+KCG I + + + + +WN++I L HG
Sbjct: 569 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 628
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
++ A FH+ L G P +VTFV +L ACS GGLV +G Y++++ +G++P +EH
Sbjct: 629 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHC 688
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDP 371
C++DLL R+G + EA I M ++P+ ++W +LL +CK+HG +D G K L +L+P
Sbjct: 689 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP 748
Query: 372 MHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHD 431
D YV + ++A +WEDV VRK M K KK S V+L+ + F GD+ H
Sbjct: 749 EDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHP 808
Query: 432 CSSDIYRMLETIGQGITAAGY 452
+ +IY LE I + I +GY
Sbjct: 809 QTMEIYAKLEDIKKLIKESGY 829
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 141/362 (38%), Gaps = 71/362 (19%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
N TFT AL AC G +H VV G + + NAL+ +Y + G
Sbjct: 344 NYVTFTSALAACF--TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG------- 394
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL 151
E+ ++ +V +MP RDVV+W+ +I GY ++
Sbjct: 395 ----------------------------EMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 152 LEDGLECFSVMREKGIRPNEXXXXXXXXX-XXXXXXXECGRFVHSTIESLKFRITVPVGT 210
+ L F MR +G+ N E G+ +H+ I S F V
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 486
Query: 211 ALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIP 270
+L+ MYAKCG + S+ LF + ++I TWN M+ A HG ++ L L K S G
Sbjct: 487 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 546
Query: 271 VNVTFVGVLNACSMGGLVSEGKRY---------------FNLMVDCY------------- 302
+F L+A + ++ EG++ FN D Y
Sbjct: 547 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 606
Query: 303 --GIQPEMEHYGCMVDLLARAGLVDE---AVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
+ + + ++ L R G +E H + M ++P V + +LL AC G VD
Sbjct: 607 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 666
Query: 358 MG 359
G
Sbjct: 667 KG 668
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 134/336 (39%), Gaps = 41/336 (12%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P E I IY M R V N+++ + + +C LG Q+ VVK G +
Sbjct: 124 PEEVIDIYKGM--RGEGVGCNENSMSLVISSCGLLKDESLGR--QIIGQVVKSGLESKLA 179
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V N+LI S+L + G + A +FD+M
Sbjct: 180 VENSLI--------------------------------SMLGSM---GNVDYANYIFDQM 204
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
ERD +SW+++ Y QNG +E+ FS+MR N + GR
Sbjct: 205 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+H + + F V V L+ MYA G ++ +F+ + KD+ +WN ++ + G
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
+ DAL L +S G VTF L AC +G+ L+V G+
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV-VSGLFYNQIIG 383
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
+V + + G + E+ ++ M D V W L+
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 418
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 132/346 (38%), Gaps = 40/346 (11%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N ES I+S M RR + N T + L G G+ H VVK+GF
Sbjct: 222 NGHIEESFRIFSLM--RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI--HGLVVKMGFDS 277
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
V V N L+ +Y G SVE A VF
Sbjct: 278 VVCVCNTLLRMYAGAGRSVE-----------------------------------ANLVF 302
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+MP +D++SW++++ +V +G D L M G N E
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 362
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
GR +H + +G ALV MY K G + +SR + + +D+ WN +I G A
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
ALA F EG +T V VL+AC + G + E + + + G + +
Sbjct: 423 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 482
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
++ + A+ G + + L + + + W +L A HG
Sbjct: 483 HVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHG 527
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 43/254 (16%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+KP+ + AC R+ S GVQVH V K G DV+V A++HLY
Sbjct: 37 IKPSSFVIASLVTACG-RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY-------- 87
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
GV G + + KVF+EMP+R+VVSW+++++GY
Sbjct: 88 -------------------------GVY--GLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
G E+ ++ + MR +G+ NE GR + + + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALF---HKFLS 265
+L+ M G ++ + +F+ +S +D +WN + A +G +++ +F +F
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 266 EGFIPVNVTFVGVL 279
E VN T V L
Sbjct: 241 E----VNSTTVSTL 250
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 111/241 (46%), Gaps = 19/241 (7%)
Query: 131 MPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECG 190
MP R+ VSW+TM+ G V+ GL +G+E F M + GI+P+ CG
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTA--------CG 52
Query: 191 RF---------VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWN 241
R VH + V V TA++ +Y G + SR +FE + +++ +W
Sbjct: 53 RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 112
Query: 242 VMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC 301
++ G + G ++ + ++ EG + V+++C + S G++ +V
Sbjct: 113 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 172
Query: 302 YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEK 361
G++ ++ ++ +L G VD A ++ + M+ E D + W ++ A +G ++ +
Sbjct: 173 -GLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFR 230
Query: 362 I 362
I
Sbjct: 231 I 231
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 215/441 (48%), Gaps = 38/441 (8%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P +++A + M R V N T L AC L G +HA++V GF D
Sbjct: 444 PDKALAAFQTM--RVEGVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIVSAGFESDEH 500
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V+N+LI +Y +CG ++ ++ +F+ +
Sbjct: 501 VKNSLITMYAKCG-----------------------------------DLSSSQDLFNGL 525
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
R++++W+ M+ +G E+ L+ S MR G+ ++ E G+
Sbjct: 526 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 585
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+H L F + A DMY+KCG I + + + + +WN++I L HG
Sbjct: 586 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 645
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
++ A FH+ L G P +VTFV +L ACS GGLV +G Y++++ +G++P +EH
Sbjct: 646 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHC 705
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDP 371
C++DLL R+G + EA I M ++P+ ++W +LL +CK+HG +D G K L +L+P
Sbjct: 706 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP 765
Query: 372 MHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHD 431
D YV + ++A +WEDV VRK M K KK S V+L+ + F GD+ H
Sbjct: 766 EDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHP 825
Query: 432 CSSDIYRMLETIGQGITAAGY 452
+ +IY LE I + I +GY
Sbjct: 826 QTMEIYAKLEDIKKLIKESGY 846
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 141/362 (38%), Gaps = 71/362 (19%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
N TFT AL AC G +H VV G + + NAL+ +Y + G
Sbjct: 361 NYVTFTSALAACF--TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG------- 411
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL 151
E+ ++ +V +MP RDVV+W+ +I GY ++
Sbjct: 412 ----------------------------EMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 152 LEDGLECFSVMREKGIRPNEXXXXXXXXX-XXXXXXXECGRFVHSTIESLKFRITVPVGT 210
+ L F MR +G+ N E G+ +H+ I S F V
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 503
Query: 211 ALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIP 270
+L+ MYAKCG + S+ LF + ++I TWN M+ A HG ++ L L K S G
Sbjct: 504 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSL 563
Query: 271 VNVTFVGVLNACSMGGLVSEGKRY---------------FNLMVDCY------------- 302
+F L+A + ++ EG++ FN D Y
Sbjct: 564 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 623
Query: 303 --GIQPEMEHYGCMVDLLARAGLVDE---AVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
+ + + ++ L R G +E H + M ++P V + +LL AC G VD
Sbjct: 624 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 683
Query: 358 MG 359
G
Sbjct: 684 KG 685
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 134/336 (39%), Gaps = 41/336 (12%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P E I IY M R V N+++ + + +C LG Q+ VVK G +
Sbjct: 141 PEEVIDIYKGM--RGEGVGCNENSMSLVISSCGLLKDESLGR--QIIGQVVKSGLESKLA 196
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V N+LI S+L + G + A +FD+M
Sbjct: 197 VENSLI--------------------------------SMLGSM---GNVDYANYIFDQM 221
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
ERD +SW+++ Y QNG +E+ FS+MR N + GR
Sbjct: 222 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+H + + F V V L+ MYA G ++ +F+ + KD+ +WN ++ + G
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
+ DAL L +S G VTF L AC +G+ L+V G+
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV-VSGLFYNQIIG 400
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
+V + + G + E+ ++ M D V W L+
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 435
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 132/346 (38%), Gaps = 40/346 (11%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N ES I+S M RR + N T + L G G+ H VVK+GF
Sbjct: 239 NGHIEESFRIFSLM--RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI--HGLVVKMGFDS 294
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
V V N L+ +Y G SVE A VF
Sbjct: 295 VVCVCNTLLRMYAGAGRSVE-----------------------------------ANLVF 319
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+MP +D++SW++++ +V +G D L M G N E
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 379
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
GR +H + +G ALV MY K G + +SR + + +D+ WN +I G A
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
ALA F EG +T V VL+AC + G + E + + + G + +
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 499
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
++ + A+ G + + L + + + W +L A HG
Sbjct: 500 HVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHG 544
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 43/254 (16%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+KP+ + AC R+ S GVQVH V K G DV+V A++HLY
Sbjct: 54 IKPSSFVIASLVTACG-RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY-------- 104
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
GV G + + KVF+EMP+R+VVSW+++++GY
Sbjct: 105 -------------------------GVY--GLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
G E+ ++ + MR +G+ NE GR + + + V
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 197
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALF---HKFLS 265
+L+ M G ++ + +F+ +S +D +WN + A +G +++ +F +F
Sbjct: 198 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 257
Query: 266 EGFIPVNVTFVGVL 279
E VN T V L
Sbjct: 258 E----VNSTTVSTL 267
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 118/253 (46%), Gaps = 19/253 (7%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
G ++ A +FD MP R+ VSW+TM+ G V+ GL +G+E F M + GI+P+
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 179 XXXXXXXXXECGRF---------VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALF 229
CGR VH + V V TA++ +Y G + SR +F
Sbjct: 66 TA--------CGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 230 ESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVS 289
E + +++ +W ++ G + G ++ + ++ EG + V+++C + S
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 290 EGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
G++ +V G++ ++ ++ +L G VD A ++ + M+ E D + W ++ A
Sbjct: 178 LGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAA 235
Query: 350 CKVHGFVDMGEKI 362
+G ++ +I
Sbjct: 236 YAQNGHIEESFRI 248
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 213/445 (47%), Gaps = 42/445 (9%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I C+ + N +E++ +++ M+ +PN T L AC AA L G + H
Sbjct: 235 VIACYVQ-NGAAAEALLVFNDMMDDG--TEPNVATVLCVLQACA--AAHDLEQGRKTHEL 289
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
++ G +V V AL+ +Y +C S E++
Sbjct: 290 AIRKGLETEVKVSTALVDMYMKCFSPEEAYA----------------------------- 320
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR-EKGIRPNEXXXXXXXX 179
VF +P +DVVSW +I G+ NG+ +E FS+M E RP+
Sbjct: 321 ------VFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
E + HS + F +G +LV++Y++CG + + +F I+ KD
Sbjct: 375 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 434
Query: 240 WNVMICGLASHGLAKDALALF-HKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
W +I G HG AL F H S P VTF+ +L+ACS GL+ EG R F LM
Sbjct: 435 WTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Query: 299 VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDM 358
V+ Y + P +EHY +VDLL R G +D A+ + + M P P + TLL AC++H +M
Sbjct: 495 VNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEM 554
Query: 359 GEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEG 418
E + KL +L+ H G+Y+ ++ +Y +WE+V ++R + ++ KK SL+E+
Sbjct: 555 AETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRR 614
Query: 419 GIHHFVAGDKDHDCSSDIYRMLETI 443
+H FVA D+ H +Y +L+ +
Sbjct: 615 KVHRFVADDELHPEKEPVYGLLKEL 639
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 157/352 (44%), Gaps = 47/352 (13%)
Query: 7 KANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGF 66
+ N P +++ + M+ V P++ T + ACTK + S LG V H V++ GF
Sbjct: 138 EKNGSPYQAVEFFRRMVMASD-VTPDRVTLITLVSACTKLSNSRLGRCV--HGFVIRRGF 194
Query: 67 ARDVFVRNALIHLYCECGS---SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRD 123
+ D+ + N+L++ Y + + +V FK + E+ DV++W++V+A V+NG +
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-------DVISWSTVIACYVQNGAAAE 247
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
A VF++M ++DG E PN
Sbjct: 248 ALLVFNDM--------------------MDDGTE-----------PNVATVLCVLQACAA 276
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVM 243
E GR H V V TALVDMY KC E++ A+F I KD+ +W +
Sbjct: 277 AHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVAL 336
Query: 244 ICGLASHGLAKDALALFHKFLSEGFI-PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
I G +G+A ++ F L E P + V VL +CS G + + K + + ++ Y
Sbjct: 337 ISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK-Y 395
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
G +V+L +R G + A + + ++ D V+W +L+ +HG
Sbjct: 396 GFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIHG 446
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
Query: 94 FEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLE 153
F +++ TL SD+ +S++ ++ G + +A ++FDE+ + D+V+WS+M+ G+ +NG
Sbjct: 85 FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPY 144
Query: 154 DGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTAL 212
+E F M + P+ GR VH + F + + +L
Sbjct: 145 QAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSL 204
Query: 213 VDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN 272
++ YAK +++ LF+ I+ KD+ +W+ +I +G A +AL +F+ + +G P
Sbjct: 205 LNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNV 264
Query: 273 VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIE 332
T + VL AC+ + +G++ L + G++ E++ +VD+ + +EA +
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDMYMKCFSPEEAYAVFS 323
Query: 333 TMTVEPDPVLWATLLDACKVHG 354
+ D V W L+ ++G
Sbjct: 324 RIP-RKDVVSWVALISGFTLNG 344
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 143/450 (31%), Positives = 205/450 (45%), Gaps = 42/450 (9%)
Query: 4 CHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVK 63
C N E++ ++ MLR +K FT + AC A G+QVH ++K
Sbjct: 198 CGLDQNERSGEALDLFKNMLRC--CIKSTSRPFTCVITACAN--APAFHMGIQVHGLIIK 253
Query: 64 LGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRD 123
LGF + +V +LI Y C KR I D
Sbjct: 254 LGFLYEEYVSASLITFYANC-------KR----------------------------IGD 278
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
+ KVFDE V W+ ++ GY N ED L FS M I PN+
Sbjct: 279 SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSA 338
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVM 243
+ G+ +H L VG +LV MY+ G + + ++F I K I +WN +
Sbjct: 339 LGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSI 398
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG 303
I G A HG K A +F + + P +TF G+L+ACS G + +G++ F M
Sbjct: 399 IVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGIN 458
Query: 304 -IQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKI 362
I +++HY CMVD+L R G + EA LIE M V+P+ ++W LL AC++H VD GEK
Sbjct: 459 HIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKA 518
Query: 363 GNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHH 422
+ LD YV L+ IYA A +W +V ++R M + K G S V + G H
Sbjct: 519 AAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHE 578
Query: 423 FVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
F +GD+ H S IY LE + + + GY
Sbjct: 579 FFSGDQPH--CSRIYEKLEFLREKLKELGY 606
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 2/271 (0%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
D WNS++ G ++ G++ DA K+F +MP ++V+SW+TMI G QN + L+ F M
Sbjct: 158 DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
I+ G VH I L F V +L+ YA C I
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
SR +F+ + + W ++ G + + +DAL++F L +P TF LN+CS
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 284 MGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLW 343
G + GK + V G++ + +V + + +G V++AV + + V W
Sbjct: 338 ALGTLDWGKEMHGVAVK-LGLETDAFVGNSLVVMYSDSGNVNDAVSVF-IKIFKKSIVSW 395
Query: 344 ATLLDACKVHGFVDMGEKIGNKLIQLDPMHD 374
+++ C HG I ++I+L+ D
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 39/180 (21%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
DVV+WNS+++G V G++ A K+FDEMPER VVSW+ M+ G ++G ++ F M
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMP 155
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
K ++V Y + G ++
Sbjct: 156 VK---------------------------------------DTAAWNSMVHGYLQFGKVD 176
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
+ LF+ + GK++ +W MICGL + + +AL LF L + F V+ AC+
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 118/309 (38%), Gaps = 80/309 (25%)
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
V + ++ G R+ + DA +FDEMP RDVVSW++MI G V+ G + ++ F M E
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEK 224
+ +V TA+V+ + G +++
Sbjct: 126 R---------------------------------------SVVSWTAMVNGCFRSGKVDQ 146
Query: 225 SRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSM 284
+ LF + KD WN M+ G G DAL LF + + I G+
Sbjct: 147 AERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERS 206
Query: 285 GGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWA 344
G E F M+ C I+ + C++ A A A H+
Sbjct: 207 G----EALDLFKNMLRC-CIKSTSRPFTCVITACANA----PAFHM-------------- 243
Query: 345 TLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHY-VQLAGIYAKARKWEDVVRVRKLMIEK 403
+VHG + I+L +++ + L YA ++ D RK+ EK
Sbjct: 244 ----GIQVHGLI----------IKLGFLYEEYVSASLITFYANCKRIGD---SRKVFDEK 286
Query: 404 VSKKVAGWS 412
V ++VA W+
Sbjct: 287 VHEQVAVWT 295
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 217/447 (48%), Gaps = 39/447 (8%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P E++ +YS +++R +PN FT ++ A + G ++H H+V+ G
Sbjct: 198 PEEALVLYS-LMQRVPNSRPN--IFTVSIAVAAAAAVKCIRRGKEIHGHIVRAG------ 248
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
L SD V W+S++ + G I +A +FD++
Sbjct: 249 -----------------------------LDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
E+DVVSW++MI Y ++ +G FS + RPNE E G+
Sbjct: 280 VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGK 339
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
VH + + F ++LVDMY KCG IE ++ + + D+ +W +I G A +G
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
+AL F L G P +VTFV VL+AC+ GLV +G +F + + + + +HY
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY 459
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDP 371
C+VDLLAR+G ++ +I M ++P LWA++L C +G +D+ E+ +L +++P
Sbjct: 460 TCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP 519
Query: 372 MHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHD 431
+ YV +A IYA A KWE+ ++RK M E K G S E++ H F+A D H
Sbjct: 520 ENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHP 579
Query: 432 CSSDIYRMLETIGQGITAAGY-PSVHL 457
+ I L + + + GY P+ L
Sbjct: 580 MYNQIVEFLRELRKKMKEEGYVPATSL 606
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 167/343 (48%), Gaps = 9/343 (2%)
Query: 27 RFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSS 86
R KP T+ + C++ A L G +VH H+ GF + + N L+ +Y +CGS
Sbjct: 79 RAKKPPASTYCNLIQVCSQTRA--LEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSL 136
Query: 87 VESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGY 146
V++ ++VF+E + D+ +WN ++ G G + +A K+FDEM E+D SW+ M+ GY
Sbjct: 137 VDA-RKVFDEMPN---RDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGY 192
Query: 147 VQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
V+ E+ L +S+M R RPN G+ +H I
Sbjct: 193 VKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSD 252
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
+ ++L+DMY KCGCI+++R +F+ I KD+ +W MI ++ +LF + +
Sbjct: 253 EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 312
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
P TF GVLNAC+ GK+ M G P +VD+ + G ++
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMYTKCGNIE 371
Query: 326 EAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
A H+++ +PD V W +L+ C +G D K + L++
Sbjct: 372 SAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 413
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
E G+ VH I + F + + L+ MYAKCG + +R +F+ + +D+ +WNVM+ G
Sbjct: 102 EEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGY 161
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
A GL ++A LF + + + ++ ++ E ++LM +P
Sbjct: 162 AEVGLLEEARKLFDEMTEKD----SYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPN 217
Query: 308 MEHYGCMVDLLARAGLVDEAVHL---IETMTVEPDPVLWATLLDACKVHGFVDMGEKIGN 364
+ V A + + I ++ D VLW++L+D G +D I +
Sbjct: 218 IFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFD 277
Query: 365 KLIQLDPMHDGHYVQLAGIYAKARKWED 392
K+++ D + + + Y K+ +W +
Sbjct: 278 KIVEKDVV---SWTSMIDRYFKSSRWRE 302
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 206/430 (47%), Gaps = 37/430 (8%)
Query: 23 LRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCE 82
L RR V PN T+ AL AC+ + + G Q+HA + K G ++ + +AL+ +Y +
Sbjct: 246 LMRRGLVHPNSVTYLSALAACS--GSQRIVEGQQIHALLWKYGIESELCIESALMDMYSK 303
Query: 83 CGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTM 142
CGS I DA +F+ E D VS + +
Sbjct: 304 CGS-----------------------------------IEDAWTIFESTTEVDEVSMTVI 328
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF 202
++G QNG E+ ++ F M + G+ + G+ +HS + KF
Sbjct: 329 LVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF 388
Query: 203 RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHK 262
V L++MY+KCG + S+ +F + ++ +WN MI A HG AL L+ +
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 263 FLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAG 322
+ P +VTF+ +L+ACS GL+ +G+ N M + +GI+P EHY C++D+L RAG
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 323 LVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAG 382
L+ EA I+++ ++PD +W LL AC HG ++GE +L Q P ++ +A
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIAN 568
Query: 383 IYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLET 442
IY+ KW++ + K M K G S +E+E H FV DK H + IY +L
Sbjct: 569 IYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSG 628
Query: 443 IGQGITAAGY 452
+ + GY
Sbjct: 629 LFPVMVDEGY 638
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 164/390 (42%), Gaps = 92/390 (23%)
Query: 57 VHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVV 116
+HA + G+ +++ V N LI Y +CG SV
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSV----------------------------- 207
Query: 117 RNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
VFD M R+V++ + +I G ++N L EDGL FS+MR + PN
Sbjct: 208 ------SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLS 261
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD 236
G+ +H+ + + + +AL+DMY+KCG IE + +FES + D
Sbjct: 262 ALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVD 321
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGF-IPVNV---------------------- 273
+ V++ GLA +G ++A+ F + L G I NV
Sbjct: 322 EVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHS 381
Query: 274 ----------TFV--GVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH--YGCMVDLLA 319
TFV G++N S G +++ + F M P+ + + M+ A
Sbjct: 382 LVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRM-------PKRNYVSWNSMIAAFA 434
Query: 320 RAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ---LDPMH 373
R G A+ L E MT V+P V + +LL AC G +D G ++ N++ + ++P
Sbjct: 435 RHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRT 494
Query: 374 DGHYVQL------AGIYAKARKWEDVVRVR 397
+ HY + AG+ +A+ + D + ++
Sbjct: 495 E-HYTCIIDMLGRAGLLKEAKSFIDSLPLK 523
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 5/244 (2%)
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
+V WNS+L+ + G++ DA K+FDEMP RDV+S + + G+++N E G M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEK 224
G + + +H+ + + VG L+ Y KCGC
Sbjct: 150 SG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 225 SRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI-PVNVTFVGVLNACS 283
R +F+ +S +++ T +I GL + L +D L LF + G + P +VT++ L ACS
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAACS 267
Query: 284 MGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLW 343
+ EG++ L+ YGI+ E+ ++D+ ++ G +++A + E+ T E D V
Sbjct: 268 GSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDAWTIFES-TTEVDEVSM 325
Query: 344 ATLL 347
+L
Sbjct: 326 TVIL 329
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 210/414 (50%), Gaps = 42/414 (10%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
++R + + SP ++I +Y M+R V P++++ + A + LG ++H+
Sbjct: 88 IMRSYIRHESP-LDAIQVYLGMVRST--VLPDRYSLPIVIKAAVQIHDFTLGK--ELHSV 142
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
V+LGF D F + I LYC+ G E
Sbjct: 143 AVRLGFVGDEFCESGFITLYCKAG-----------------------------------E 167
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+A KVFDE PER + SW+ +I G G + +E F M+ G+ P++
Sbjct: 168 FENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTAS 227
Query: 181 XXXXXXXECGRFVHSTIESLKF--RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIW 238
+H + K + + + +L+DMY KCG ++ + +FE + +++
Sbjct: 228 CGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV 287
Query: 239 TWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
+W+ MI G A++G +AL F + G P +TFVGVL+AC GGLV EGK YF +M
Sbjct: 288 SWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMM 347
Query: 299 VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDM 358
+ ++P + HYGC+VDLL+R G + EA ++E M ++P+ ++W L+ C+ G V+M
Sbjct: 348 KSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEM 407
Query: 359 GEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
E + +++L+P +DG YV LA +YA W+DV RVRKLM K K+ +S
Sbjct: 408 AEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 131/313 (41%), Gaps = 23/313 (7%)
Query: 49 SGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTW 108
SGL S ++H H K +F R L H SSV ++ + L + +++
Sbjct: 4 SGLIS--KLHVHGTKRTNHFTIFHR--LNHFVTTSSSSVTPLS---PQDRNKLLATLLSN 56
Query: 109 NSVLAGVVR-NGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGI 167
+ LA V R +G+I + ++ D+ P W+ ++ Y+++ D ++ + M +
Sbjct: 57 CTSLARVRRIHGDIFRS-RILDQYP--IAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTV 113
Query: 168 RPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRA 227
P+ G+ +HS L F + + +Y K G E +R
Sbjct: 114 LPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARK 173
Query: 228 LFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGL 287
+F+ + + +WN +I GL G A +A+ +F G P + T V V +C GGL
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC--GGL 231
Query: 288 VSEGKRYFNLMVDCYGIQPEMEH------YGCMVDLLARAGLVDEAVHLIETMTVEPDPV 341
G + +Q + E ++D+ + G +D A H+ E M + + V
Sbjct: 232 ---GDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMR-QRNVV 287
Query: 342 LWATLLDACKVHG 354
W++++ +G
Sbjct: 288 SWSSMIVGYAANG 300
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 193/404 (47%), Gaps = 37/404 (9%)
Query: 35 TFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVF 94
T+ L C +R G ++HA + +GFA + +++ L+ LY
Sbjct: 110 TYAVLLQECKQRKE--YTKGKRIHAQMFVVGFALNEYLKVKLLILY-------------- 153
Query: 95 EEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLED 154
+G+++ A +F + RD++ W+ MI GYVQ GL ++
Sbjct: 154 ---------------------ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQE 192
Query: 155 GLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVD 214
GL + MR+ I P++ E G+ H+ + + + V +ALVD
Sbjct: 193 GLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVD 252
Query: 215 MYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVT 274
MY KC +F+ +S +++ TW +I G HG + L F K EG P VT
Sbjct: 253 MYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVT 312
Query: 275 FVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
F+ VL AC+ GGLV +G +F M YGI+PE +HY MVD L RAG + EA +
Sbjct: 313 FLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKS 372
Query: 335 TVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVV 394
+ P +W +LL AC++HG V + E K ++LDP + G+YV A YA E
Sbjct: 373 PCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAAS 432
Query: 395 RVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYR 438
+VR+ M KK G+S +EL+G +H F+ D H S IY+
Sbjct: 433 KVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYK 476
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 13/162 (8%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
E + IY M R+ R V P+Q+TF AC+ A L G + HA ++K ++ V
Sbjct: 191 QEGLFIYYDM-RQNRIV-PDQYTFASVFRACS--ALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+AL+ +Y +C SS RVF++ +V+TW S+++G +G++ + K F++M
Sbjct: 247 DSALVDMYFKC-SSFSDGHRVFDQLS---TRNVITWTSLISGYGYHGKVSEVLKCFEKMK 302
Query: 133 ER----DVVSWSTMIMGYVQNGLLEDGLECF-SVMREKGIRP 169
E + V++ ++ GL++ G E F S+ R+ GI P
Sbjct: 303 EEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEP 344
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 206/435 (47%), Gaps = 37/435 (8%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E++ ++ M +KP+ T +AC A L G+QVH ++K G
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEA--LRFGLQVHGSMIKTGLVL 509
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+VFV ++LI LY +CG + K VF
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALK-----------------------------------VF 534
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
M ++V+W++MI Y +N L E ++ F++M +GI P+
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLL 594
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G+ +H L + AL+DMY KCG + + +F+ + K + TWN+MI G
Sbjct: 595 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
SHG AL+LF + G P +VTF+ +++AC+ G V EGK F M YGI+P M
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
EHY MVDLL RAGL++EA I+ M +E D +W LL A + H V++G KL++
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLR 774
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
++P YVQL +Y +A + ++ LM EK K G S +E+ + F +G
Sbjct: 775 MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGS 834
Query: 429 DHDCSSDIYRMLETI 443
++I+ +L +
Sbjct: 835 SSPMKAEIFNVLNRL 849
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 172/428 (40%), Gaps = 88/428 (20%)
Query: 19 YSAM----LRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRN 74
YSA+ R++ V P+ T + + C+ G VHA + K + +
Sbjct: 355 YSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK--SVHAELFKRPIQSTSTIES 412
Query: 75 ALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER 134
AL+ LY +CG DA VF M E+
Sbjct: 413 ALLTLYSKCGCD-----------------------------------PDAYLVFKSMEEK 437
Query: 135 DVVSWSTMIMGYVQNGLLEDGLECFSVMREK--GIRPNEXXXXXXXXXXXXXXXXECGRF 192
D+V+W ++I G +NG ++ L+ F M++ ++P+ G
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
VH ++ + V VG++L+D+Y+KCG E + +F S+S +++ WN MI + + L
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNL 557
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF---------------NL 297
+ ++ LF+ LS+G P +V+ VL A S + +GK N
Sbjct: 558 PELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNA 617
Query: 298 MVDCY----------GIQPEMEH------------YGCMVDLLARAGLVDEAVHLIETMT 335
++D Y I +M+H YG D + L DE E+
Sbjct: 618 LIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES-- 675
Query: 336 VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ---LDPMHDGHYVQLAGIYAKARKWED 392
PD V + +L+ AC GFV+ G+ I + Q ++P + HY + + +A E+
Sbjct: 676 --PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNME-HYANMVDLLGRAGLLEE 732
Query: 393 VVRVRKLM 400
K M
Sbjct: 733 AYSFIKAM 740
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 41/328 (12%)
Query: 22 MLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYC 81
ML + VK +FT AL AC++ SG G Q+H VVK+G D +V +L+ +Y
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGR--QIHCDVVKMGLHNDPYVCTSLLSMYS 318
Query: 82 ECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWST 141
+CG + +AE VF + ++ + W+
Sbjct: 319 KCGM-----------------------------------VGEAETVFSCVVDKRLEIWNA 343
Query: 142 MIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLK 201
M+ Y +N L+ F MR+K + P+ G+ VH+ +
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 202 FRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALF- 260
+ T + +AL+ +Y+KCGC + +F+S+ KD+ W +I GL +G K+AL +F
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 261 -HKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLA 319
K + P + V NAC+ + G + M+ G+ + ++DL +
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYS 522
Query: 320 RAGLVDEAVHLIETMTVEPDPVLWATLL 347
+ GL + A+ + +M+ E + V W +++
Sbjct: 523 KCGLPEMALKVFTSMSTE-NMVAWNSMI 549
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 162/412 (39%), Gaps = 79/412 (19%)
Query: 35 TFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVF 94
TF L AC+ A + L G +H VV LG+ D F+ +L+++Y +CG ++ +VF
Sbjct: 62 TFPSLLKACS--ALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGF-LDYAVQVF 118
Query: 95 EEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLED 154
+ W+ +GV RDV W++MI GY + ++
Sbjct: 119 D-----------GWSQSQSGV----------------SARDVTVWNSMIDGYFKFRRFKE 151
Query: 155 GLECFSVMREKGIRPNEXXXXXXXXXX--XXXXXXECGRFVHSTIESLKFRITVPVGTAL 212
G+ CF M G+RP+ E G+ +H + + TAL
Sbjct: 152 GVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTAL 211
Query: 213 VDMYAKCG-CIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
+DMY K G I+ R E ++ WNVMI G G+ + +L L+ + V
Sbjct: 212 IDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLV 271
Query: 272 NVTFVGVLNACS-----------------MG------------------GLVSEGKRYFN 296
+ +F G L ACS MG G+V E + F+
Sbjct: 272 STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS 331
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM---TVEPDPVLWATLLDACKVH 353
+VD +E + MV A A+ L M +V PD + ++ C V
Sbjct: 332 CVVD-----KRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVL 386
Query: 354 GFVDMGEKIGNKLIQLDPMHDGHYVQ--LAGIYAKARKWEDVVRVRKLMIEK 403
G + G+ + +L + P+ ++ L +Y+K D V K M EK
Sbjct: 387 GLYNYGKSVHAELFK-RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 135/328 (41%), Gaps = 37/328 (11%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V+P+ + + + K G Q+H +++ D F++ ALI +Y + G S++
Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSID 223
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
++ RVF E ED + +VV W+ MI+G+
Sbjct: 224 AW-RVFVEIED---------------------------------KSNVVLWNVMIVGFGG 249
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
+G+ E L+ + + + ++ GR +H + + V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
T+L+ MY+KCG + ++ +F + K + WN M+ A + AL LF +
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAV 328
+P + T V++ CS+ GL + GK + IQ ++ L ++ G +A
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFK-RPIQSTSTIESALLTLYSKCGCDPDAY 428
Query: 329 HLIETMTVEPDPVLWATLLDA-CKVHGF 355
+ ++M E D V W +L+ CK F
Sbjct: 429 LVFKSME-EKDMVAWGSLISGLCKNGKF 455
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 210/399 (52%), Gaps = 11/399 (2%)
Query: 50 GLGSGVQVHAHVVKLGFARD---VFVRNALIHLYCECGSSVESFKRVFE--EEEDTLCSD 104
G+G +VH + VK G D + NAL+ Y +CG+ VE ++F E TL
Sbjct: 447 GIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN-VEYAHKIFLGLSERRTL--- 502
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
V++NS+L+G V +G DA+ +F EM D+ +WS M+ Y ++ + + F ++
Sbjct: 503 -VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA 561
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEK 224
+G+RPN R H I GT L+D+YAKCG ++
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGT-LLDVYAKCGSLKH 620
Query: 225 SRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSM 284
+ ++F+S + +D+ + M+ G A HG K+AL ++ P +V +L AC
Sbjct: 621 AYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCH 680
Query: 285 GGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWA 344
GL+ +G + ++ + +G++P ME Y C VDL+AR G +D+A + M VEP+ +W
Sbjct: 681 AGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWG 740
Query: 345 TLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKV 404
TLL AC + +D+G + N L+Q + G++V ++ +YA KWE V+ +R LM +K
Sbjct: 741 TLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKE 800
Query: 405 SKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETI 443
KK AG S +E++G + FV+GD H I+ ++ +
Sbjct: 801 MKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNAL 839
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 140/325 (43%), Gaps = 42/325 (12%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVES 89
KP+ TF L C + S +G +H++++K G +D V NAL+ +Y +
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSY--NGKSMHSYIIKAGLEKDTLVGNALVSMYAK------- 169
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN 149
F +F DA FD + ++DVVSW+ +I G+ +N
Sbjct: 170 FGFIFP---------------------------DAYTAFDGIADKDVVSWNAIIAGFSEN 202
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXX---XXXXXXXXXECGRFVHS-TIESLKFRIT 205
++ D F +M ++ PN GR +HS ++ +
Sbjct: 203 NMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTH 262
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
V V +LV Y + G IE++ +LF + KD+ +WNV+I G AS+ A LFH +
Sbjct: 263 VFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVH 322
Query: 266 EGFI-PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLV 324
+G + P +VT + +L C+ ++ GK + ++ + + ++ AR G
Sbjct: 323 KGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDT 382
Query: 325 DEAVHLIETMTVEPDPVLWATLLDA 349
A M+ + D + W +LDA
Sbjct: 383 SAAYWAFSLMSTK-DIISWNAILDA 406
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 133/339 (39%), Gaps = 41/339 (12%)
Query: 78 HLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVV 137
++ C G + S+ + L + V NS+++ +R G I +A +F M +D+V
Sbjct: 240 NIACRSGRQIHSYV----VQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 138 SWSTMIMGYVQNGLLEDGLECFSVMREKG-IRPNEXXXXXXXXXXXXXXXXECGRFVHST 196
SW+ +I GY N + F + KG + P+ G+ +HS
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSY 355
Query: 197 IESLKFRI-TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKD 255
I + + VG AL+ YA+ G + F +S KDI +WN ++ A
Sbjct: 356 ILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQ 415
Query: 256 ALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMV 315
L L H L+E +VT + +L C ++ GI E +G V
Sbjct: 416 FLNLLHHLLNEAITLDSVTILSLLKFC----------------INVQGIGKVKEVHGYSV 459
Query: 316 DLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG 375
+AGL+ + E +P L LLDA G V+ KI L + +
Sbjct: 460 ----KAGLLHD----------EEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVS- 504
Query: 376 HYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLV 414
Y L Y + +D + L E + + WSL+
Sbjct: 505 -YNSLLSGYVNSGSHDD---AQMLFTEMSTTDLTTWSLM 539
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 104/252 (41%), Gaps = 11/252 (4%)
Query: 102 CSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGY-VQNGLLEDGLECFS 160
CS+V SVL + + D +K+F +M D V W+ ++ G V G + + F
Sbjct: 55 CSEVS--KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG--RETMRFFK 110
Query: 161 VMR-EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKC 219
M +P+ G+ +HS I VG ALV MYAK
Sbjct: 111 AMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKF 170
Query: 220 GCI-EKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGV 278
G I + F+ I+ KD+ +WN +I G + + + DA F L E P T V
Sbjct: 171 GFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANV 230
Query: 279 LNAC-SMGGLVS--EGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT 335
L C SM ++ G++ + +V +Q + +V R G ++EA L M
Sbjct: 231 LPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG 290
Query: 336 VEPDPVLWATLL 347
D V W ++
Sbjct: 291 -SKDLVSWNVVI 301
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 210/424 (49%), Gaps = 39/424 (9%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVL--AGVVRNGEI---- 121
RDV N +I + + G E V+E ++ D +T ++L A +RN EI
Sbjct: 382 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQT 441
Query: 122 ----------------------------RDAEKVFDE--MPERDVVSWSTMIMGYVQNGL 151
R ++K+F+ ERD +W++MI GY QNG
Sbjct: 442 HAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Query: 152 LEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTA 211
E F M E+ IRPN + G+ +H V V +A
Sbjct: 502 TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASA 561
Query: 212 LVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
LVDMY+K G I+ + +F ++ T+ MI G HG+ + A++LF G P
Sbjct: 562 LVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPD 621
Query: 272 NVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLI 331
+TFV VL+ACS GL+ EG + F M + Y IQP EHY C+ D+L R G V+EA +
Sbjct: 622 AITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFV 681
Query: 332 ETMTVEPDPV-LWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD--GHYVQLAGIYAKAR 388
+ + E + LW +LL +CK+HG +++ E + +L + D + G+ V L+ +YA+ +
Sbjct: 682 KGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQ 741
Query: 389 KWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGIT 448
KW+ V +VR+ M EK KK G S +E+ G ++ FV+ D++H SS+IY +++ + + +
Sbjct: 742 KWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Query: 449 AAGY 452
+
Sbjct: 802 GDSF 805
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 175/438 (39%), Gaps = 84/438 (19%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH-------- 60
N+ P E++ YS M + F + +T++ L AC + L +G VH H
Sbjct: 83 NNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAE--TKNLKAGKAVHCHLIRCLQNS 140
Query: 61 -------------------------VVKLGF----ARDVFVRNALIHLYCECGSSVE--- 88
VV+ F ++V N LI Y + G + E
Sbjct: 141 SRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACR 200
Query: 89 ---------------SFKRVFEEEE-------------------DTLCSDVVTWNSVLAG 114
SF VF D D+ +S ++
Sbjct: 201 QFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISM 260
Query: 115 VVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF-SVMREKGIRPNEXX 173
G+I + +VFD ER++ W+TMI YVQN L + +E F + K I +E
Sbjct: 261 YAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVT 320
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFR-ITVPVGTALVDMYAKCGCIEKSRALFESI 232
E GR H + S FR + + + +L+ MY++CG + KS +F S+
Sbjct: 321 YLLAASAVSALQQVELGRQFHGFV-SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSM 379
Query: 233 SGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK 292
+D+ +WN MI +GL + L L ++ +GF +T +L+A S GK
Sbjct: 380 RERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGK 439
Query: 293 RYFNLMVDCYGIQPE-MEHYGCMVDLLARAGLVDEAVHLIE-TMTVEPDPVLWATLLDAC 350
+ ++ GIQ E M Y ++D+ +++GL+ + L E + E D W +++
Sbjct: 440 QTHAFLIR-QGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGY 496
Query: 351 KVHGFVDMGEKIGNKLIQ 368
+G + + K+++
Sbjct: 497 TQNGHTEKTFLVFRKMLE 514
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 119/292 (40%), Gaps = 29/292 (9%)
Query: 100 TLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF 159
TL + S L+ + ++G + A ++FD +P+ V W+T+I+G++ N L + L +
Sbjct: 34 TLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFY 93
Query: 160 SVMREKGIRPN--EXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYA 217
S M++ N + G+ VH + + V +L++MY
Sbjct: 94 SRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYV 153
Query: 218 KC----GCIEKS--RALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
C C E R +F+++ K++ WN +I G +A F + P
Sbjct: 154 SCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPS 213
Query: 272 NVTFVGVLNACSMGGLVSEGKRYFNLMV--------DCYGIQPEMEHYGCMVDLLARAGL 323
V+FV V A S+ + + ++ LM+ D + + + Y + D+ + +
Sbjct: 214 PVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRV 273
Query: 324 VDEAVHLIETMTVEPDPVLWATLL-----DACKVHGFVDMGEKIGNKLIQLD 370
D VE + +W T++ + C V E IG+K I D
Sbjct: 274 FDSC--------VERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSD 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 39/162 (24%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N ++ ++ ML + ++PN T L AC++ + LG Q+H ++ +
Sbjct: 499 NGHTEKTFLVFRKMLEQN--IRPNAVTVASILPACSQIGSVDLGK--QLHGFSIRQYLDQ 554
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+VFV +AL+ +Y + G+ I+ AE +F
Sbjct: 555 NVFVASALVDMYSKAGA-----------------------------------IKYAEDMF 579
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN 170
+ ER+ V+++TMI+GY Q+G+ E + F M+E GI+P+
Sbjct: 580 SQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPD 621
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 237/484 (48%), Gaps = 74/484 (15%)
Query: 21 AMLRRRRF--VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIH 78
++ RR +F +KP++ T+ F AC K +G G VH+ + K+G RDV + ++LI
Sbjct: 118 SLYRRMKFSGLKPDKFTYNFVFIACAK--LEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 79 L-------------------------------YCECG---SSVESFKRV----FEEEEDT 100
+ Y E G +++ F+++ FE +E T
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 101 LCS---------DVVTW-------------------NSVLAGVVRNGEIRDAEKVFDEMP 132
L S D+ T + +++ + G++ A +VF++M
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI 295
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
++D V+W+ MI Y QNG + + F M + G+ P+ E G+
Sbjct: 296 KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ 355
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
+ + L + + V T LVDMY KCG +E++ +FE++ K+ TWN MI A G
Sbjct: 356 IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGH 415
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
AK+AL LF + P ++TF+GVL+AC GLV +G RYF+ M +G+ P++EHY
Sbjct: 416 AKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYT 472
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL-DP 371
++DLL+RAG++DEA +E +PD ++ A +L AC V + EK L+++ +
Sbjct: 473 NIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEA 532
Query: 372 MHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHD 431
+ G+YV + + A + W++ ++R LM ++ K G S +E+EG + F+AG
Sbjct: 533 KNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQ 592
Query: 432 CSSD 435
C +
Sbjct: 593 CGRE 596
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 150/350 (42%), Gaps = 38/350 (10%)
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
SV +++ + L V N ++ V G+ + +F E + S++ MI G
Sbjct: 49 SVNQLRQI---QAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRG 105
Query: 146 YVQN-GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
E L + M+ G++P++ GR VHS++ +
Sbjct: 106 LTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLER 165
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL 264
V + +L+ MYAKCG + +R LF+ I+ +D +WN MI G + G AKDA+ LF K
Sbjct: 166 DVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKME 225
Query: 265 SEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL---------------MVDCYG------ 303
EGF P T V +L ACS G + G+ + ++ YG
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLD 285
Query: 304 ---------IQPEMEHYGCMVDLLARAGLVDEAVHL---IETMTVEPDPVLWATLLDACK 351
I+ + + M+ + ++ G EA L +E V PD +T+L AC
Sbjct: 286 SARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACG 345
Query: 352 VHGFVDMGEKIGNKLIQLDPMHDGHYVQ-LAGIYAKARKWEDVVRVRKLM 400
G +++G++I +L H+ + L +Y K + E+ +RV + M
Sbjct: 346 SVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM 395
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI +++ N SE+ ++ M + V P+ T + L AC A LG ++ HA
Sbjct: 305 MITVYSQ-NGKSSEAFKLFFEM--EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHAS 361
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+L +++V L+ +Y +CG VE RVFE + TWN+++ G
Sbjct: 362 --ELSLQHNIYVATGLVDMYGKCG-RVEEALRVFEA---MPVKNEATWNAMITAYAHQGH 415
Query: 121 IRDAEKVFDEM--PERDVVSWSTMIMGYVQNGLLEDGLECFSVM 162
++A +FD M P D +++ ++ V GL+ G F M
Sbjct: 416 AKEALLLFDRMSVPPSD-ITFIGVLSACVHAGLVHQGCRYFHEM 458
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 213/441 (48%), Gaps = 42/441 (9%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
+E++ + +ML + V+PN++T+ L +C +G+G +H +VK GF +
Sbjct: 249 TEAVKAFQSMLVEK--VQPNEYTYASVLISCGN--LKDIGNGKLIHGLMVKSGFESALAS 304
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+ +L+ +Y C + D+ +VF +
Sbjct: 305 QTSLLTMYLRCSL-----------------------------------VDDSLRVFKCIE 329
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+ VSW+++I G VQNG E L F M I+PN E GR
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
+H + F G+ L+D+Y KCGC + +R +F+++S D+ + N MI A +G
Sbjct: 390 IHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGF 449
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
++AL LF + ++ G P +VT + VL AC+ LV EG F+ I +HY
Sbjct: 450 GREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYA 508
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPM 372
CMVDLL RAG ++EA ++ T + PD VLW TLL ACKVH V+M E+I K+++++P
Sbjct: 509 CMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPG 567
Query: 373 HDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK-DHD 431
+G + ++ +YA KW V+ ++ M + KK S VE+ H F+AGD H
Sbjct: 568 DEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHP 627
Query: 432 CSSDIYRMLETIGQGITAAGY 452
S I LE + + GY
Sbjct: 628 NSEQILENLEELIKKSKDLGY 648
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 128/270 (47%), Gaps = 6/270 (2%)
Query: 103 SDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM 162
S+V ++++ V+ G+ R+A+ V D + E+DVV + +I+GY Q G + ++ F M
Sbjct: 199 SNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM 258
Query: 163 REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI 222
+ ++PNE G+ +H + F + T+L+ MY +C +
Sbjct: 259 LVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLV 318
Query: 223 EKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC 282
+ S +F+ I + +W +I GL +G + AL F K + + P + T L C
Sbjct: 319 DDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL 342
S + EG R + +V YG + ++DL + G D A + +T++ E D +
Sbjct: 379 SNLAMFEEG-RQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS-EVDVIS 436
Query: 343 WATLLDACKVHGF----VDMGEKIGNKLIQ 368
T++ + +GF +D+ E++ N +Q
Sbjct: 437 LNTMIYSYAQNGFGREALDLFERMINLGLQ 466
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 139/328 (42%), Gaps = 43/328 (13%)
Query: 34 HTFTFALHACT-KRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKR 92
H F+ L C +R+ SG+ + + AH++K GF ++
Sbjct: 66 HNFSQLLRQCIDERSISGIKT---IQAHMLKSGFPAEI---------------------- 100
Query: 93 VFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLL 152
+ + ++ ++ G+I A +VFD M ER +V+W+++I +++
Sbjct: 101 --------------SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRS 146
Query: 153 EDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT-VPVGTA 211
++ +E + +M + P+E + + H L ++ V VG+A
Sbjct: 147 KEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSA 206
Query: 212 LVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
LVDMY K G +++ + + + KD+ +I G + G +A+ F L E P
Sbjct: 207 LVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPN 266
Query: 272 NVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLI 331
T+ VL +C + GK LMV G + + ++ + R LVD+++ +
Sbjct: 267 EYTYASVLISCGNLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLRVF 325
Query: 332 ETMTVEPDPVLWATLLDACKVHGFVDMG 359
+ + P+ V W +L+ +G +M
Sbjct: 326 KCIEY-PNQVSWTSLISGLVQNGREEMA 352
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 213/454 (46%), Gaps = 40/454 (8%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V PN T A+ AC+ + G +VH+ VK+GF DV V N+L+ +Y +CG +E
Sbjct: 348 VVPNAVTIMSAVSACS--CLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK-LE 404
Query: 89 SFKRVFEE--------------------------------EEDTLCSDVVTWNSVLAGVV 116
++VF+ ++ L +++TWN++++G +
Sbjct: 405 DARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYI 464
Query: 117 RNGEIRDAEKVFDEMP-----ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNE 171
+NG+ +A +F M +R+ +W+ +I GY+QNG ++ LE F M+ PN
Sbjct: 465 KNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNS 524
Query: 172 XXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFES 231
+ R +H + V AL D YAK G IE SR +F
Sbjct: 525 VTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLG 584
Query: 232 ISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEG 291
+ KDI TWN +I G HG ALALF++ ++G P T ++ A + G V EG
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEG 644
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACK 351
K+ F + + Y I P +EH MV L RA ++EA+ I+ M ++ + +W + L C+
Sbjct: 645 KKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCR 704
Query: 352 VHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGW 411
+HG +DM L L+P + ++ IYA K + K + + KK G
Sbjct: 705 IHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQ 764
Query: 412 SLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQ 445
S +E+ IH F GD+ C+ +Y ++E + +
Sbjct: 765 SWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSR 798
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 164/379 (43%), Gaps = 22/379 (5%)
Query: 52 GSGVQVHAHVVKLGFA---------RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLC 102
S + V+A +L FA RDV N+++ YC+ G E+ + V E E++ +
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 103 SDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE----RDVVSWSTMIMGYVQNGLLEDGLEC 158
+VTWN ++ G + G+ A + +M DV +W+ MI G + NG+ L+
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 159 FSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAK 218
F M G+ PN G VHS + F V VG +LVDMY+K
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 219 CGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGV 278
CG +E +R +F+S+ KD++TWN MI G G A LF + P +T+ +
Sbjct: 400 CGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTM 459
Query: 279 LNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE- 337
++ G E F M +Q + ++ + G DEA+ L M
Sbjct: 460 ISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSR 519
Query: 338 --PDPVLWATLLDACKVHGFVDMGEKIGNKLIQ--LDPMHDGHYVQLAGIYAKARKWEDV 393
P+ V +LL AC M +I +++ LD +H L YAK+ D+
Sbjct: 520 FMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNA-LTDTYAKS---GDI 575
Query: 394 VRVRKLMIEKVSKKVAGWS 412
R + + +K + W+
Sbjct: 576 EYSRTIFLGMETKDIITWN 594
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 147/319 (46%), Gaps = 20/319 (6%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
DV +L+ + G I DA KVFD M ER++ +WS MI Y + + + F +M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
+ G+ P++ E G+ +HS + L + V +++ +YAKCG ++
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
+ F + +D+ WN ++ +G ++A+ L + EG P VT+ +L
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW-NIL---- 288
Query: 284 MGGLVSEGK--RYFNLM--VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM---TV 336
+GG GK +LM ++ +GI ++ + M+ L G+ +A+ + M V
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 337 EPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD---GHYVQLAGIYAKARKWEDV 393
P+ V + + AC ++ G ++ + +++ + D G+ L +Y+K K ED
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN--SLVDMYSKCGKLED- 405
Query: 394 VRVRKLMIEKVSKKVAGWS 412
RK+ +K V W+
Sbjct: 406 --ARKVFDSVKNKDVYTWN 422
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
GR +H+ L V V T L+ MYAKCGCI +R +F+S+ ++++TW+ MI +
Sbjct: 100 GRILHARF-GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSR 158
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
++ LF + +G +P + F +L C+ G V GK ++++ G+ +
Sbjct: 159 ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK-LGMSSCLR 217
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
++ + A+ G +D A M E D + W ++L A
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMR-ERDVIAWNSVLLA 256
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 204/390 (52%), Gaps = 47/390 (12%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
++ + + T + +C+ A LG +H +VVK + V N+LI LY + G
Sbjct: 429 IEIDSASATSVISSCSHIGAVLLGK--SLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTV 486
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDV----VSWSTMIM 144
++ R+F E + ++V+TWN+++A V + A +FD M + ++ T++M
Sbjct: 487 AW-RMFCEAD----TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLM 541
Query: 145 GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
V G LE G+ +H I + +
Sbjct: 542 ACVNTGSLER-----------------------------------GQMIHRYITETEHEM 566
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL 264
+ + AL+DMYAKCG +EKSR LF++ + KD WNVMI G HG + A+ALF +
Sbjct: 567 NLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQME 626
Query: 265 SEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLV 324
P TF+ +L+AC+ GLV +GK+ F L + Y ++P ++HY C+VDLL+R+G +
Sbjct: 627 ESDVKPTGPTFLALLSACTHAGLVEQGKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNL 685
Query: 325 DEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIY 384
+EA + +M PD V+W TLL +C HG +MG ++ + + DP +DG+Y+ LA +Y
Sbjct: 686 EEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMY 745
Query: 385 AKARKWEDVVRVRKLMIEKVSKKVAGWSLV 414
+ A KWE+ R R++M E K AG S+V
Sbjct: 746 SAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 158/380 (41%), Gaps = 53/380 (13%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I+ H +N + S+ + +ML + P+ T + AC + +G+ VH
Sbjct: 96 IIKAHF-SNGDYARSLCFFFSMLLSGQ--SPDHFTAPMVVSACAELLWFHVGT--FVHGL 150
Query: 61 VVKLG-FARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNG 119
V+K G F R+ V + ++ Y +CG
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGF---------------------------------- 176
Query: 120 EIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGI---RPNEXXXXX 176
++DA VFDEMP+RDVV+W+ +I G+VQNG E GL M G +PN
Sbjct: 177 -LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLEC 235
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD 236
+ GR +H + V +++ Y+K G ++ F + +D
Sbjct: 236 GFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDED 295
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
+++W +I LA G +++ +F + ++G P V ++N LV +GK +
Sbjct: 296 MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHG 355
Query: 297 LMV-DCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA-----C 350
++ C+ + + ++ + + L+ A L ++ E + W T+L C
Sbjct: 356 FVIRHCFSLDSTV--CNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKC 413
Query: 351 KVHGFVDMGEKIGNKLIQLD 370
V +++ KI N I++D
Sbjct: 414 HVKC-IELFRKIQNLGIEID 432
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 155/426 (36%), Gaps = 74/426 (17%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVES 89
KPN T AC+ A L G +H VK G A FV++++ Y + G+ E+
Sbjct: 227 KPNPRTLECGFQACSNLGA--LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEA 284
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN 149
+ F E+ + D+ SW+++I ++
Sbjct: 285 YLS-----------------------------------FRELGDEDMFSWTSIIASLARS 309
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
G +E+ + F M+ KG+ P+ G+ H + F + V
Sbjct: 310 GDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVC 369
Query: 210 TALVDMYAKCGCIEKSRALFESISGK-DIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
+L+ MY K + + LF IS + + WN M+ G + LF K + G
Sbjct: 370 NSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGI 429
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRY---------------FNLMVDCYGIQPEME---- 309
+ + V+++CS G V GK N ++D YG ++
Sbjct: 430 EIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWR 489
Query: 310 ----------HYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDACKVHGFV 356
+ M+ ++A+ L + M E P + TLL AC G +
Sbjct: 490 MFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSL 549
Query: 357 DMGEKIGNKLIQLD-PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVE 415
+ G+ I + + + M+ L +YAK E + R+L K W+++
Sbjct: 550 ERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLE---KSRELFDAGNQKDAVCWNVMI 606
Query: 416 LEGGIH 421
G+H
Sbjct: 607 SGYGMH 612
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
++IA++ M+ KP+ T L AC + L G +H ++ + ++ +
Sbjct: 516 KAIALFDRMVSEN--FKPSSITLVTLLMACVNTGS--LERGQMIHRYITETEHEMNLSLS 571
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
ALI +Y +CG +E + +F+ D V WN +++G +G++ A +FD+M E
Sbjct: 572 AALIDMYAKCGH-LEKSRELFDAGNQ---KDAVCWNVMISGYGMHGDVESAIALFDQMEE 627
Query: 134 RDV----VSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN 170
DV ++ ++ GL+E G + F M + ++PN
Sbjct: 628 SDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPN 668
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 8/198 (4%)
Query: 101 LCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFS 160
L ++ + +++ G+ + +VF + RD+ W+++I + NG L F
Sbjct: 55 LSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFF 114
Query: 161 VMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLK---FRITVPVGTALVDMYA 217
M G P+ G FVH + LK F VG + V Y+
Sbjct: 115 SMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV--LKHGGFDRNTAVGASFVYFYS 172
Query: 218 KCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF---IPVNVT 274
KCG ++ + +F+ + +D+ W +I G +G ++ L K S G P T
Sbjct: 173 KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 275 FVGVLNACSMGGLVSEGK 292
ACS G + EG+
Sbjct: 233 LECGFQACSNLGALKEGR 250
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 203/423 (47%), Gaps = 53/423 (12%)
Query: 10 SPPSESIAIYSAMLRRRRFVKPNQHTFTFAL-HACTKRAASGLGSGVQVHAHVVKLGFAR 68
S P +SI I++ + + N+ TF F L ++S L G VH V KLGF
Sbjct: 85 SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLY 144
Query: 69 DV-FVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
+ + L+H Y +NG++R A KV
Sbjct: 145 ESELIGTTLLHFY-----------------------------------AKNGDLRYARKV 169
Query: 128 FDEMPERDVVSWSTMIMGYV--QNGLLEDGLECFSVMRE-----KGIRPNEXXXXXXXXX 180
FDEMPER V+W+ MI GY ++ + + + R G+RP +
Sbjct: 170 FDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSA 229
Query: 181 XXXXXXXECGRFVHSTIESLKF--RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIW 238
E G VH IE L F + V +GTALVDMY+KCGC+ + ++FE + K+++
Sbjct: 230 ISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVF 289
Query: 239 TWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
TW M GLA +G + L ++ G P +TF +L+A GLV EG F M
Sbjct: 290 TWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSM 349
Query: 299 VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDM 358
+G+ P +EHYGC+VDLL +AG + EA I M ++PD +L +L +AC ++G M
Sbjct: 350 KTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVM 409
Query: 359 GEKIGNKLIQLDPMHDG-------HYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGW 411
GE+IG L++++ + YV L+ + A KW +V ++RK M E+ K G+
Sbjct: 410 GEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGY 469
Query: 412 SLV 414
S V
Sbjct: 470 SFV 472
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/452 (30%), Positives = 205/452 (45%), Gaps = 40/452 (8%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
+ SE+ ++ M +RR ++P+ TF+ L AC+ AA L G Q+HA + K F
Sbjct: 336 DEASSEAFKLFMDM--QRRGLEPSPSTFSVVLKACS--AAKTLEYGRQIHALICKNNFQS 391
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D F+ +ALI LY GS+ D + F
Sbjct: 392 DEFIGSALIELYALMGST-----------------------------------EDGMQCF 416
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
++D+ SW++MI +VQN LE + F + IRP E
Sbjct: 417 ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALS 476
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G + V T+ + MYAK G + + +F + D+ T++ MI LA
Sbjct: 477 SGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLA 536
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
HG A +AL +F + G P F+GVL AC GGLV++G +YF M + Y I P
Sbjct: 537 QHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNE 596
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
+H+ C+VDLL R G + +A +LI + + PV W LL +C+V+ +G+++ +L++
Sbjct: 597 KHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLME 656
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
L+P G YV L IY + VR+LM ++ KK S + + H F D
Sbjct: 657 LEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADL 716
Query: 429 DHDCSSDIYRMLETIGQGITAAGYPSVHLTCV 460
H S IY MLET+ + Y VH V
Sbjct: 717 SHPSSQMIYTMLETM-DNVDFVDYTLVHFCSV 747
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 148/367 (40%), Gaps = 86/367 (23%)
Query: 40 LHACTKRAASG-LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEE 98
L AC G + G+ +H + KLG D+ VR AL+ +Y
Sbjct: 256 LKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMY------------------ 297
Query: 99 DTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLED---- 154
+NG +++A K+F MP ++VV+++ MI G++Q + D
Sbjct: 298 -----------------AKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASS 340
Query: 155 -GLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALV 213
+ F M+ +G+ P+ E GR +H+ I F+ +G+AL+
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 400
Query: 214 DMYAKCGCIEKSRALFESISGKDIWTWNVMI-CGLASHGLAKDALALFHKFLSEGFIPVN 272
++YA G E F S S +DI +W MI C + + L + A LF + S P
Sbjct: 401 ELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQL-ESAFDLFRQLFSSHIRPEE 459
Query: 273 VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ--------------------------- 305
T +++AC+ +S G++ + Y I+
Sbjct: 460 YTVSLMMSACADFAALSSGEQ-----IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Query: 306 --------PEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHG 354
P++ Y M+ LA+ G +EA+++ E+M ++P+ + +L AC G
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 355 FVDMGEK 361
V G K
Sbjct: 575 LVTQGLK 581
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 12/245 (4%)
Query: 120 EIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
E+ A ++FD MPER+++S++++I GY Q G E +E F RE ++ ++
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
+ G +H + V + L+DMY+KCG ++++ +LF+ +D +
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 240 WNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV 299
WN +I G G A++ L L K +G VL AC + ++EG + +
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCIN--LNEGFIEKGMAI 274
Query: 300 DCYGIQPEMEH----YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
CY + ME ++D+ A+ G + EA+ L M + V + + + GF
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAM-----ISGF 328
Query: 356 VDMGE 360
+ M E
Sbjct: 329 LQMDE 333
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 146/339 (43%), Gaps = 50/339 (14%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
R +K ++ T+ AL C +R LG +H VV G ++ VF+ N LI +Y +CG
Sbjct: 140 REANLKLDKFTYAGALGFCGERCDLDLGE--LLHGLVVVNGLSQQVFLINVLIDMYSKCG 197
Query: 85 ---SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWST 141
++ F R E D V+WNS+++G VR G + + +M RD ++ +T
Sbjct: 198 KLDQAMSLFDRCDER-------DQVSWNSLISGYVRVGAAEEPLNLLAKM-HRDGLNLTT 249
Query: 142 MIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLK 201
+G SV++ I NE E G +H L
Sbjct: 250 YALG--------------SVLKACCINLNE-------------GFIEKGMAIHCYTAKLG 282
Query: 202 FRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL-----ASHGLAKDA 256
+ V TAL+DMYAK G ++++ LF + K++ T+N MI G + + +A
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 257 LALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG-CMV 315
LF G P TF VL ACS + G++ L+ C E G ++
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI--CKNNFQSDEFIGSALI 400
Query: 316 DLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
+L A G ++ + + T + D W +++D C V
Sbjct: 401 ELYALMGSTEDGMQCFAS-TSKQDIASWTSMID-CHVQN 437
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 212/447 (47%), Gaps = 42/447 (9%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N P ++I Y M + VKP++ T L AC L +GV++H +K
Sbjct: 376 NFLPDKAIDTYRMM--DQDSVKPDEITVAAVLSACA--TLGDLDTGVELHKLAIKARLIS 431
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
V V N LI++Y +C I A +F
Sbjct: 432 YVIVANNLINMYSKCKC-----------------------------------IDKALDIF 456
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+P ++V+SW+++I G N + L M+ ++PN
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALM 515
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
CG+ +H+ + + + AL+DMY +CG + + + F S KD+ +WN+++ G +
Sbjct: 516 CGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYS 574
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
G + LF + + P +TF+ +L CS +V +G YF+ M D YG+ P +
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNL 633
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
+HY C+VDLL RAG + EA I+ M V PDP +W LL+AC++H +D+GE + +
Sbjct: 634 KHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFE 693
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
LD G+Y+ L +YA KW +V +VR++M E AG S VE++G +H F++ DK
Sbjct: 694 LDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDK 753
Query: 429 DHDCSSDIYRMLETIGQGITAAGYPSV 455
H + +I +LE + ++ G +
Sbjct: 754 YHPQTKEINTVLEGFYEKMSEVGLTKI 780
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
VKP+ +TF L C L G +VH HVV+ G+ D+ V NALI +Y +CG
Sbjct: 192 VKPDVYTFPCVLRTCG--GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG---- 245
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
+++ A +FD MP RD++SW+ MI GY +
Sbjct: 246 -------------------------------DVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
NG+ +GLE F MR + P+ GR +H+ + + F + + V
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
+L MY G ++ LF + KDI +W MI G + L A+ + +
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSV 394
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY----GCMVDLLARAGLV 324
P +T VL+AC+ G + G L I+ + Y ++++ ++ +
Sbjct: 395 KPDEITVAAVLSACATLGDLDTGVELHKL-----AIKARLISYVIVANNLINMYSKCKCI 449
Query: 325 DEAVHLIETMTVEPDPVLWATLLDACKVHG 354
D+A+ + + + + W +++ +++
Sbjct: 450 DKALDIFHNIP-RKNVISWTSIIAGLRLNN 478
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 7/298 (2%)
Query: 62 VKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCS-DVVTWNSVLAGVVRNGE 120
+++ DVFV AL+ L CE + E +V+ ++ S V N+ LA VR G
Sbjct: 88 LRVAVDEDVFV--ALVRL-CEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGN 144
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR-EKGIRPNEXXXXXXXX 179
+ DA VF +M ER++ SW+ ++ GY + G ++ + + M G++P+
Sbjct: 145 LVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLR 204
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
G+ VH + + + + V AL+ MY KCG ++ +R LF+ + +DI +
Sbjct: 205 TCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS 264
Query: 240 WNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV 299
WN MI G +G+ + L LF P +T V++AC + G G R + V
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG-RDIHAYV 323
Query: 300 DCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
G ++ + + AG EA L M D V W T++ + + D
Sbjct: 324 ITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTMISGYEYNFLPD 380
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E + ++ AM R V P+ T T + AC LG +HA+V+ GFA D+ V
Sbjct: 280 EGLELFFAM--RGLSVDPDLMTLTSVISACELLGDRRLGR--DIHAYVITTGFAVDISVC 335
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N+L +Y GS W R+AEK+F M
Sbjct: 336 NSLTQMYLNAGS----------------------W-------------REAEKLFSRMER 360
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+D+VSW+TMI GY N L + ++ + +M + ++P+E + G +
Sbjct: 361 KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL 420
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H + V V L++MY+KC CI+K+ +F +I K++ +W +I GL +
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRC 480
Query: 254 KDALALFHK 262
+AL +
Sbjct: 481 FEALIFLRQ 489
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 205/388 (52%), Gaps = 9/388 (2%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQ---VHAHVVKLGFARDVFVRNALIHLYCECGSS 86
K + +T + L A R ++ + VHA ++K D + AL+ Y + G
Sbjct: 132 KADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGK- 190
Query: 87 VESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGY 146
+ES + VFE +D +VV S+++G + G + DAE++F+ +D+V ++ M+ G+
Sbjct: 191 LESARTVFETMKD---ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGF 247
Query: 147 VQNG-LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
++G + ++ + M+ G PN E G+ VH+ I
Sbjct: 248 SRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTH 307
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
+ +G++L+DMYAKCG I +R +F+ + K++++W MI G +G ++AL LF +
Sbjct: 308 IKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKE 367
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
P VTF+G L+ACS GLV +G F M Y ++P+MEHY C+VDL+ RAG ++
Sbjct: 368 FRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLN 427
Query: 326 EAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDP-MHDGHYVQLAGIY 384
+A M PD +WA LL +C +HG V++ ++L +L+ G Y+ L+ +Y
Sbjct: 428 KAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVY 487
Query: 385 AKARKWEDVVRVRKLMIEKVSKKVAGWS 412
A KW++V ++R++M + K G S
Sbjct: 488 ASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 145/380 (38%), Gaps = 105/380 (27%)
Query: 53 SGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVL 112
+G ++HA ++K GF D+ + L+ L+ +CG C
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKCG-----------------C---------- 84
Query: 113 AGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEX 172
+ A +VFDE+P+ + +++ MI GY+++GL+++ L M G + +
Sbjct: 85 --------LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGY 136
Query: 173 XXXXXXXXXXXXXXX-----ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRA 227
R VH+ I + + TALVD Y K G +E +R
Sbjct: 137 TLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESART 196
Query: 228 LFES------------ISG-------------------KDIWTWNVMICGLASHG-LAKD 255
+FE+ ISG KDI +N M+ G + G AK
Sbjct: 197 VFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKR 256
Query: 256 ALALFHKFLSEGFIPVNVTFVGVLNACSM----------------GGL---VSEGKRYFN 296
++ ++ GF P TF V+ ACS+ G+ + G +
Sbjct: 257 SVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
Query: 297 LMVDCYGIQ------PEMEH-----YGCMVDLLARAGLVDEAVHLIETMT---VEPDPVL 342
+ C GI +M+ + M+D + G +EA+ L M +EP+ V
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 343 WATLLDACKVHGFVDMGEKI 362
+ L AC G VD G +I
Sbjct: 377 FLGALSACSHSGLVDKGYEI 396
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
M+ +++ S+ +Y +M +R PN TF + AC+ + +G QVHA
Sbjct: 243 MVEGFSRSGETAKRSVDMYISM--QRAGFHPNISTFASVIGACSVLTSHEVGQ--QVHAQ 298
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
++K G + + ++L+ +Y +CG + +RVF++ ++ +V +W S++ G +NG
Sbjct: 299 IMKSGVYTHIKMGSSLLDMYAKCG-GINDARRVFDQMQE---KNVFSWTSMIDGYGKNGN 354
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYV----QNGLLEDGLECF-SVMREKGIRP 169
+A ++F M E + +G + +GL++ G E F S+ R+ ++P
Sbjct: 355 PEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP 408
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 5/181 (2%)
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
+ G+ +H+ I F+ + + L+ ++ KCGC+ +R +F+ + + +N MI G
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
HGL K+ L L + G T VL A + G R +V I+ +
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 308 ME----HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIG 363
+E +VD ++G ++ A + ETM E + V +++ GFV+ E+I
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDE-NVVCCTSMISGYMNQGFVEDAEEIF 229
Query: 364 N 364
N
Sbjct: 230 N 230
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 199/409 (48%), Gaps = 42/409 (10%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N +E+++++ M + +KPN T L C L G VH +K+G
Sbjct: 321 NGSVNEALSLFQKM--KGVEIKPNCVTIASVLSGCG--LIENLELGRSVHGLSIKVGI-W 375
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D V NAL+H+Y +C + RDA+ VF
Sbjct: 376 DTNVANALVHMYAKCYQN-----------------------------------RDAKYVF 400
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+ E+D+V+W+++I G+ QNG + + L F M + + PN
Sbjct: 401 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLA 460
Query: 189 CGRFVHSTIESLKF--RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICG 246
G +H+ L F +V VGTAL+D YAKCG + +R +F++I K+ TW+ MI G
Sbjct: 461 VGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGG 520
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
G +L LF + L + P TF +L+AC G+V+EGK+YF+ M Y P
Sbjct: 521 YGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTP 580
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKL 366
+HY CMVD+LARAG +++A+ +IE M ++PD + L C +H D+GE + K+
Sbjct: 581 STKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKM 640
Query: 367 IQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVE 415
+ L P +YV ++ +YA +W VR LM ++ K+AG S +E
Sbjct: 641 LDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 165/394 (41%), Gaps = 73/394 (18%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
M+RC+ N E + +Y +++ + + F+ AL ACT+ L +G ++H
Sbjct: 113 MLRCYC-LNKESVEVVKLYDLLMKHG--FRYDDIVFSKALKACTE--LQDLDNGKKIHCQ 167
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+VK+ + D V L+ +Y +CG E
Sbjct: 168 LVKVP-SFDNVVLTGLLDMYAKCG-----------------------------------E 191
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
I+ A KVF+++ R+VV W++MI GYV+N L E+GL F+ MRE + NE
Sbjct: 192 IKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMA 251
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
G++ H + ++ + T+L+DMY KCG I +R +F S D+ W
Sbjct: 252 CTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMW 311
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV- 299
MI G +G +AL+LF K P VT VL+ C + + G+ L +
Sbjct: 312 TAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIK 371
Query: 300 -----------------DCYGIQP-----EMEH------YGCMVDLLARAGLVDEAVHLI 331
CY + EME + ++ ++ G + EA+ L
Sbjct: 372 VGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF 431
Query: 332 ETM---TVEPDPVLWATLLDACKVHGFVDMGEKI 362
M +V P+ V A+L AC G + +G +
Sbjct: 432 HRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 157/366 (42%), Gaps = 50/366 (13%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI + K N E + +++ M R V N++T+ + ACTK +A L G H
Sbjct: 213 MIAGYVK-NDLCEEGLVLFNRM--RENNVLGNEYTYGTLIMACTKLSA--LHQGKWFHGC 267
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+VK G + +L+ +Y +CG +
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCG-----------------------------------D 292
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
I +A +VF+E D+V W+ MI+GY NG + + L F M+ I+PN
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSG 352
Query: 181 XXXXXXXECGRFVHSTIESLKFRI-TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
E GR VH S+K I V ALV MYAKC ++ +FE S KDI
Sbjct: 353 CGLIENLELGRSVHGL--SIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVA 410
Query: 240 WNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV 299
WN +I G + +G +AL LFH+ SE P VT + +AC+ G ++ G V
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 300 DCYGIQPEMEHYG-CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDM 358
+ H G ++D A+ G A + +T+ E + + W+ + + G+
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAM-----IGGYGKQ 524
Query: 359 GEKIGN 364
G+ IG+
Sbjct: 525 GDTIGS 530
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 141/345 (40%), Gaps = 51/345 (14%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
G +DA VFD++PE D W M+ Y N + ++ + ++ + G R ++
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKAL 149
Query: 179 XXXXXXXXXECGRFVHSTIESLKFRITVP-----VGTALVDMYAKCGCIEKSRALFESIS 233
+ G+ +H + + VP V T L+DMYAKCG I+ + +F I+
Sbjct: 150 KACTELQDLDNGKKIHCQL------VKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT 203
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR 293
+++ W MI G + L ++ L LF++ + T+ ++ AC+ + +GK
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKW 263
Query: 294 Y-------------------FNLMVDCYGIQ------PEMEH-----YGCMVDLLARAGL 323
+ ++ V C I E H + M+ G
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 323
Query: 324 VDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQL 380
V+EA+ L + M ++P+ V A++L C + +++G + I++ L
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANAL 383
Query: 381 AGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLV----ELEGGIH 421
+YAK + D V ++ E K + W+ + G IH
Sbjct: 384 VHMYAKCYQNRDAKYVFEMESE---KDIVAWNSIISGFSQNGSIH 425
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 218/437 (49%), Gaps = 47/437 (10%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
+++ ++ M+ +R +KP+ T ++ AC LG Q+H HV++ + D FV+
Sbjct: 388 QALGLFRQMVTQR--IKPDAFTLASSISACENAGLVPLGK--QIHGHVIRTDVS-DEFVQ 442
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N+LI +Y ++G + A VF+++
Sbjct: 443 NSLIDMYS-----------------------------------KSGSVDSASTVFNQIKH 467
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
R VV+W++M+ G+ QNG + + F M + NE E G++V
Sbjct: 468 RSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWV 527
Query: 194 HST--IESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
H I LK T TAL+DMYAKCG + + +F ++S + I +W+ MI HG
Sbjct: 528 HHKLIISGLKDLFT---DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHG 584
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
A++ F++ + G P V F+ VL+AC G V EGK YFNLM +G+ P EH+
Sbjct: 585 RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHF 643
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDP 371
C +DLL+R+G + EA I+ M D +W +L++ C++H +D+ + I N L +
Sbjct: 644 ACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVT 703
Query: 372 MHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHD 431
G+Y L+ IYA+ +WE+ R+R M KKV G+S +E++ + F AG+++
Sbjct: 704 DDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRI 763
Query: 432 CSSDIYRMLETIGQGIT 448
+ +IYR L + Q +T
Sbjct: 764 QTDEIYRFLGNL-QNLT 779
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 34/318 (10%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
D V S+L + G + DAEKVFD MP RD+V+WST++ ++NG + L F M
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
+ G+ P+ R VH I F + + +L+ MY+KCG +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
S +FE I+ K+ +W MI ++ AL F + + G P VT VL++C
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 284 MGGLVSEGKRYFNLMV--------------------------DCYGI-----QPEMEHYG 312
+ GL+ EGK V DC + + +
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 313 CMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
++ L A G+V +A+ L M ++PD A+ + AC+ G V +G++I +I+
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT 434
Query: 370 DPMHDGHYVQLAGIYAKA 387
D + L +Y+K+
Sbjct: 435 DVSDEFVQNSLIDMYSKS 452
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 11/258 (4%)
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
+++F+ +E TLC NS+L + G++ +E++F+++ +++ VSW+ MI Y +
Sbjct: 230 RKMFDLDE-TLC------NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282
Query: 151 LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITV-PVG 209
E L FS M + GI PN G+ VH + +
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 342
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
ALV++YA+CG + + +S ++I WN +I A G+ AL LF + +++
Sbjct: 343 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
P T ++AC GLV GK+ ++ + E ++D+ +++G VD A
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRT-DVSDEFVQ-NSLIDMYSKSGSVDSAST 460
Query: 330 LIETMTVEPDPVLWATLL 347
+ + V W ++L
Sbjct: 461 VFNQIK-HRSVVTWNSML 477
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 97/248 (39%), Gaps = 41/248 (16%)
Query: 4 CHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVK 63
C N E+I+++ M +++ N+ TF + AC+ + L G VH ++
Sbjct: 478 CGFSQNGNSVEAISLFDYMYHS--YLEMNEVTFLAVIQACS--SIGSLEKGKWVHHKLII 533
Query: 64 LGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRD 123
G +D+F ALI +Y +C G++
Sbjct: 534 SGL-KDLFTDTALIDMYAKC-----------------------------------GDLNA 557
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
AE VF M R +VSWS+MI Y +G + + F+ M E G +PNE
Sbjct: 558 AETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGH 617
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKS-RALFESISGKDIWTWNV 242
E G++ + ++S +D+ ++ G ++++ R + E D W
Sbjct: 618 SGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677
Query: 243 MICGLASH 250
++ G H
Sbjct: 678 LVNGCRIH 685
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 198/391 (50%), Gaps = 6/391 (1%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
V+ + + GF RD V L+ + G + L +VV S++
Sbjct: 201 AVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVD 260
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
+ G I A +VF M + VSW ++I G+ QNGL E M+ G +P+
Sbjct: 261 MYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVT 320
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV-GTALVDMYAKCGCIEKSRALFESI 232
+ GR VH I LK + V TAL+DMY+KCG + SR +FE +
Sbjct: 321 LVGVLVACSQVGSLKTGRLVHCYI--LKRHVLDRVTATALMDMYSKCGALSSSREIFEHV 378
Query: 233 SGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK 292
KD+ WN MI HG ++ ++LF K P + TF +L+A S GLV +G+
Sbjct: 379 GRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQ 438
Query: 293 RYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKV 352
+F++M++ Y IQP +HY C++DLLARAG V+EA+ +I + ++ +W LL C
Sbjct: 439 HWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCIN 498
Query: 353 HGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
H + +G+ NK++QL+P G ++ +A A KW++V +VRKLM +KV G+S
Sbjct: 499 HRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYS 558
Query: 413 LVELEGGIHHFVAGDKDHDCSSDIYRMLETI 443
+E+ G + F+ D H + Y ML+ +
Sbjct: 559 AIEVNGELRTFLMEDLSHH---EHYHMLQVL 586
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 2/247 (0%)
Query: 111 VLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN 170
++A R GEI A KVFDE+P+R V +++MI+ Y + ++ L + M + I+P+
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 171 EXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFE 230
E G V ++ V V ++++++Y KCG ++++ LF
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 231 SISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSE 290
++ +D+ W M+ G A G + A+ + + +EGF V +G+L A G
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 291 GKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDAC 350
G+ + G+ + +VD+ A+ G ++ A + M + V W +L+
Sbjct: 236 GRSVHGYLYRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKT-AVSWGSLISGF 293
Query: 351 KVHGFVD 357
+G +
Sbjct: 294 AQNGLAN 300
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 170/305 (55%), Gaps = 10/305 (3%)
Query: 117 RNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
+ G I A ++FD +DVV+W+ MI Y + GLLE+ + M+ + ++PN
Sbjct: 274 KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG 333
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD 236
GR V +E + + +GTALVDMYAK G +EK+ +F + KD
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKD 393
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEG--FIPVNVTFVGVLNACSMGGLVSEGKRY 294
+ +W MI G +HGLA++A+ LF+K E P +TF+ VLNACS GGLV EG R
Sbjct: 394 VKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRC 453
Query: 295 FNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
F MV+ Y P++EHYGC+VDLL RAG ++EA LI + + D W LL AC+V+G
Sbjct: 454 FKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYG 513
Query: 355 FVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSK--KVAGWS 412
D+GE + +L ++ H + LAG +A A E K + +++K K AG+S
Sbjct: 514 NADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPE------KSLDNELNKGRKEAGYS 567
Query: 413 LVELE 417
+E+E
Sbjct: 568 AIEIE 572
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 161/367 (43%), Gaps = 43/367 (11%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MIR ++ ++ P + ++++ + R + + ++ +F L +C++ +G G+ H
Sbjct: 96 MIRGYSISDEPE-RAFSVFNQL--RAKGLTLDRFSFITTLKSCSRELCVSIGEGL--HGI 150
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
++ GF +RNALIH YC CG +
Sbjct: 151 ALRSGFMVFTDLRNALIHFYCVCG-----------------------------------K 175
Query: 121 IRDAEKVFDEMPER-DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
I DA KVFDEMP+ D V++ST++ GY+Q L+ F +MR+ + N
Sbjct: 176 ISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLS 235
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
H + + + + TAL+ MY K G I +R +F+ KD+ T
Sbjct: 236 AISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVT 295
Query: 240 WNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV 299
WN MI A GL ++ + L + E P + TFVG+L++C+ G+ +L+
Sbjct: 296 WNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLE 355
Query: 300 DCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMG 359
+ I + +VD+ A+ GL+++AV + M + D W ++ HG
Sbjct: 356 E-ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISGYGAHGLAREA 413
Query: 360 EKIGNKL 366
+ NK+
Sbjct: 414 VTLFNKM 420
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 146/362 (40%), Gaps = 65/362 (17%)
Query: 96 EEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDG 155
+++D S ++ ++SVL +IR A +F+ + ++ ++TMI GY + E
Sbjct: 57 DKDDFAVSKLLAFSSVL-------DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERA 109
Query: 156 LECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDM 215
F+ +R KG+ + G +H F + + AL+
Sbjct: 110 FSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHF 169
Query: 216 YAKCGCIEKSRALFESISGK-DIWTWNVMICGLASHGLAKDALAL-FHKFLSEGFIPVNV 273
Y CG I +R +F+ + D T++ ++ G ++K ALAL + + + + VNV
Sbjct: 170 YCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQ--VSKKALALDLFRIMRKSEVVVNV 227
Query: 274 -TFVGVLNACS-MGGL----------------------------------VSEGKRYFNL 297
T + L+A S +G L +S +R F
Sbjct: 228 STLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF-- 285
Query: 298 MVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDACKVHG 354
DC I+ ++ + CM+D A+ GL++E V L+ M E P+ + LL +C
Sbjct: 286 --DC-AIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 355 FVDMGEKIGNKL----IQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAG 410
+G + + L I LD + L +YAK E V + M + K V
Sbjct: 343 AAFVGRTVADLLEEERIALDAILG---TALVDMYAKVGLLEKAVEIFNRMKD---KDVKS 396
Query: 411 WS 412
W+
Sbjct: 397 WT 398
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 97 EEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGL 156
EE+ + D + +++ + G + A ++F+ M ++DV SW+ MI GY +GL + +
Sbjct: 355 EEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAV 414
Query: 157 ECFSVMREKG--IRPNEXXXXXXXXX-XXXXXXXECGRFVHSTIESLKFRITVPVGTALV 213
F+ M E+ +RPNE E R +E+ F V +V
Sbjct: 415 TLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVV 474
Query: 214 DMYAKCGCIEKSRALFESIS-GKDIWTWNVMICGLASHGLA 253
D+ + G +E++ L ++ D W ++ +G A
Sbjct: 475 DLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNA 515
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 22 MLRRRRF--VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHL 79
+LR+ ++ +KPN TF L +C A+ +G V ++ A D + AL+ +
Sbjct: 315 LLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERI--ALDAILGTALVDM 372
Query: 80 YCECG---SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDV 136
Y + G +VE F R+ ++ DV +W ++++G +G R+A +F++M E +
Sbjct: 373 YAKVGLLEKAVEIFNRMKDK-------DVKSWTAMISGYGAHGLAREAVTLFNKMEEENC 425
Query: 137 ------VSWSTMIMGYVQNGLLEDGLECFSVMRE 164
+++ ++ GL+ +G+ CF M E
Sbjct: 426 KVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVE 459
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 208/404 (51%), Gaps = 50/404 (12%)
Query: 38 FALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEE 97
FA+ + + AS L G Q+HA V KLGF + ++ +L+ Y SSV
Sbjct: 69 FAIKVSSAQKASSL-DGRQIHALVRKLGFNAVIQIQTSLVGFY----SSV---------- 113
Query: 98 EDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER-DVVSWSTMIMGYVQNGLLEDGL 156
G++ A +VFDE PE+ ++V W+ MI Y +N + +
Sbjct: 114 ---------------------GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAI 152
Query: 157 ECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG--TALVD 214
E F M + I + + G ++S K R+ + + +L++
Sbjct: 153 ELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLN 212
Query: 215 MYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS------EGF 268
MY K G EK+R LF+ KD+ T+ MI G A +G A+++L LF K +
Sbjct: 213 MYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVI 272
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAV 328
P +VTF+GVL ACS GLV EGKR+F M+ Y ++P H+GCMVDL R+G + +A
Sbjct: 273 TPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAH 332
Query: 329 HLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKAR 388
I M ++P+ V+W TLL AC +HG V++GE++ ++ +LD H G YV L+ IYA
Sbjct: 333 EFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKG 392
Query: 389 KWEDVVRVRKLMIEKVSK-KVAGWSLVELEGGIHHFVAGDKDHD 431
W++ ++R ++V K ++ G S +EL I+ FV+G ++D
Sbjct: 393 MWDEKSKMR----DRVRKRRMPGKSWIELGSIINEFVSGPDNND 432
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Query: 37 TFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEE 96
T AL AC A +G + + K A D+ +RN+L+++Y + G + E +++F+E
Sbjct: 171 TVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGET-EKARKLFDE 229
Query: 97 EEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDV----------VSWSTMIMGY 146
++ DV T+ S++ G NG+ +++ ++F +M D V++ ++M
Sbjct: 230 ---SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMAC 286
Query: 147 VQNGLLEDGLECF-SVMREKGIRPNE 171
+GL+E+G F S++ + ++P E
Sbjct: 287 SHSGLVEEGKRHFKSMIMDYNLKPRE 312
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 199/408 (48%), Gaps = 43/408 (10%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E++ ++ AM R + V P+ TF L AC L G ++H ++ G
Sbjct: 242 NDLYEEALGLFYAMHRGKGLV-PDGSTFGTVLTACGN--LRRLKQGKEIHGKLITNGIGS 298
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+V V ++L+ +Y +CGS +R+A +VF
Sbjct: 299 NVVVESSLLDMYGKCGS-----------------------------------VREARQVF 323
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+ M +++ VSWS ++ GY QNG E +E F M EK +
Sbjct: 324 NGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVR 379
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G+ +H V V +AL+D+Y K GCI+ + ++ +S +++ TWN M+ LA
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALA 439
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
+G ++A++ F+ + +G P ++F+ +L AC G+V EG+ YF LM YGI+P
Sbjct: 440 QNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGT 499
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD-MGEKIGNKLI 367
EHY CM+DLL RAGL +EA +L+E D LW LL C + + E+I +++
Sbjct: 500 EHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMM 559
Query: 368 QLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVE 415
+L+P + YV L+ +Y + D + +RKLM+ + K G S ++
Sbjct: 560 ELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 48/326 (14%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
N+ T + A+ AC++ LG H V+ GF + F+ + L +LY
Sbjct: 162 NEFTLSSAVKACSELGEVRLGR--CFHGVVITHGFEWNHFISSTLAYLY----------- 208
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL 151
GV N E DA +VFDEMPE DV+ W+ ++ + +N L
Sbjct: 209 ----------------------GV--NREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 152 LEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGT 210
E+ L F M R KG+ P+ + G+ +H + + V V +
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 211 ALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIP 270
+L+DMY KCG + ++R +F +S K+ +W+ ++ G +G + A+ +F + +
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL-- 362
Query: 271 VNVTFVGVLNACSMGGLVSEGKRYFNLMV--DCYGIQPEMEHYGCMVDLLARAGLVDEAV 328
F VL AC+ V GK V C+G + ++DL ++G +D A
Sbjct: 363 --YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG---NVIVESALIDLYGKSGCIDSAS 417
Query: 329 HLIETMTVEPDPVLWATLLDACKVHG 354
+ M++ + + W +L A +G
Sbjct: 418 RVYSKMSIR-NMITWNAMLSALAQNG 442
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 117/295 (39%), Gaps = 37/295 (12%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G+Q HAHVVK G D V N+L+ LY + G
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG--------------------------- 112
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
+R+ +VFD +D +SW++M+ GYV LE F M G+ NE
Sbjct: 113 -------MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFT 165
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS 233
GR H + + F + + L +Y +R +F+ +
Sbjct: 166 LSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMP 225
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKF-LSEGFIPVNVTFVGVLNACSMGGLVSEGK 292
D+ W ++ + + L ++AL LF+ +G +P TF VL AC + +GK
Sbjct: 226 EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGK 285
Query: 293 RYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
++ GI + ++D+ + G V EA + M+ + + V W+ LL
Sbjct: 286 EIHGKLIT-NGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALL 338
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 224/435 (51%), Gaps = 7/435 (1%)
Query: 18 IYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALI 77
+Y AML F KPN T AC + +S L G++VH +++ D+ + NA+I
Sbjct: 220 MYKAMLACSDF-KPNGVTVISVFQACGQ--SSDLIFGLEVHKKMIENHIQMDLSLCNAVI 276
Query: 78 HLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVV 137
Y +CGS ++ + +F+E + D VT+ ++++G + +G +++A +F EM +
Sbjct: 277 GFYAKCGS-LDYARALFDEMSE---KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 138 SWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTI 197
+W+ MI G +QN E+ + F M G RPN + G+ +H+
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 198 ESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDAL 257
+ V T+++D YAK G + ++ +F++ + + W +I A HG + A
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 258 ALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDL 317
+LF + G P +VT VL+A + G + F+ M+ Y I+P +EHY CMV +
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 318 LARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHY 377
L+RAG + +A+ I M ++P +W LL+ V G +++ ++L +++P + G+Y
Sbjct: 513 LSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNY 572
Query: 378 VQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIY 437
+A +Y +A +WE+ VR M KK+ G S +E E G+ F+A D + S ++Y
Sbjct: 573 TIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMY 632
Query: 438 RMLETIGQGITAAGY 452
++E + + ++ Y
Sbjct: 633 EIIEGLVESMSDKEY 647
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 111/246 (45%), Gaps = 42/246 (17%)
Query: 42 ACTKRAASG-----LGS-GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFE 95
+C +A SG LGS QVH V++ GF DVFV N +I Y +C +
Sbjct: 133 SCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDN---------- 182
Query: 96 EEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDG 155
I A KVFDEM ERDVVSW++MI GY Q+G ED
Sbjct: 183 -------------------------IESARKVFDEMSERDVVSWNSMISGYSQSGSFEDC 217
Query: 156 LECFSVMRE-KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVD 214
+ + M +PN G VH + ++ + + A++
Sbjct: 218 KKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIG 277
Query: 215 MYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVT 274
YAKCG ++ +RALF+ +S KD T+ +I G +HGL K+A+ALF + S G N
Sbjct: 278 FYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 275 FVGVLN 280
G++
Sbjct: 338 ISGLMQ 343
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 117/312 (37%), Gaps = 47/312 (15%)
Query: 55 VQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAG 114
+Q+HA +V D F+ + LI Y
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFY---------------------------------- 67
Query: 115 VVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF------SVMREKGIR 168
R R A VFDE+ R+ S++ +++ Y + D F S R
Sbjct: 68 -TRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAAR 126
Query: 169 PNEXXXXXXXXXXXXXXXXECG---RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKS 225
P+ G R VH + F V VG ++ Y KC IE +
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESA 186
Query: 226 RALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS-EGFIPVNVTFVGVLNACSM 284
R +F+ +S +D+ +WN MI G + G +D ++ L+ F P VT + V AC
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ 246
Query: 285 GGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWA 344
+ G M++ + IQ ++ ++ A+ G +D A L + M+ E D V +
Sbjct: 247 SSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMS-EKDSVTYG 304
Query: 345 TLLDACKVHGFV 356
++ HG V
Sbjct: 305 AIISGYMAHGLV 316
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 202/400 (50%), Gaps = 39/400 (9%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
S+SI ++ M R V+P+ T L AC+ A+ SG +H +KLGF+ +FV
Sbjct: 115 SKSIDLFLRMWRES-CVRPDDFTLPLILRACS--ASREAKSGDLIHVLCLKLGFSSSLFV 171
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+AL+ +Y V G++ A K+FD+MP
Sbjct: 172 SSALVIMY-----------------------------------VDMGKLLHARKLFDDMP 196
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
RD V ++ M GYVQ G GL F M G + + G+
Sbjct: 197 VRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKS 256
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
VH + + +G A+ DMY KC ++ + +F ++S +D+ +W+ +I G G
Sbjct: 257 VHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGD 316
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
+ LF + L EG P VTF+GVL+AC+ GGLV + YF LM + Y I PE++HY
Sbjct: 317 VVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYA 375
Query: 313 CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPM 372
+ D ++RAGL++EA +E M V+PD + +L CKV+G V++GE++ +LIQL P
Sbjct: 376 SVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPR 435
Query: 373 HDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
+YV LAG+Y+ A ++++ +R+ M EK KV G S
Sbjct: 436 KASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 9/268 (3%)
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM-R 163
V++ VLA N + VF MP R++ SW+ +I + ++G ++ F M R
Sbjct: 67 VLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWR 126
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
E +RP++ + G +H L F ++ V +ALV MY G +
Sbjct: 127 ESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLL 186
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
+R LF+ + +D + M G G A LA+F + GF +V V +L AC
Sbjct: 187 HARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACG 246
Query: 284 MGGLVSEGKRYFNLMV---DCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDP 340
G + GK + C G+ + D+ + ++D A H + D
Sbjct: 247 QLGALKHGKSVHGWCIRRCSCLGLNLG----NAITDMYVKCSILDYA-HTVFVNMSRRDV 301
Query: 341 VLWATLLDACKVHGFVDMGEKIGNKLIQ 368
+ W++L+ + G V M K+ +++++
Sbjct: 302 ISWSSLILGYGLDGDVVMSFKLFDEMLK 329
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 218/426 (51%), Gaps = 17/426 (3%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQH-------TFTFALHACTKRAASGLGS 53
++RC++ +P + +Y + R N+ T+ F L A + L
Sbjct: 83 LLRCYSLGETP-LHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLL 141
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G+ +H +KLGF V+V+ AL+ +Y G+ +++ K VF+E + + VTWN ++
Sbjct: 142 GIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHK-VFDEMPE---RNPVTWNVMIT 197
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE-KGIRPNEX 172
G+ G+ A ++MP R VVSW+T+I GY + ++ + FS M I+PNE
Sbjct: 198 GLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEI 257
Query: 173 XXXXXXXXXXXXXXXECGRFVHSTIESLKF-RITVPVGTALVDMYAKCGCIEKSRALFES 231
+ VH+ + F + V +L+D YAKCGCI+ + F
Sbjct: 258 TILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIE 317
Query: 232 ISG--KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVS 289
I K++ +W MI A HG+ K+A+++F G P VT + VLNACS GGL
Sbjct: 318 IPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAE 377
Query: 290 EG-KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLD 348
E +FN MV+ Y I P+++HYGC+VD+L R G ++EA + + +E V+W LL
Sbjct: 378 EEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLG 437
Query: 349 ACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKV 408
AC V+ ++ E++ KL++L+ H G YV ++ I+ ++ D R RK M + K+
Sbjct: 438 ACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKL 497
Query: 409 AGWSLV 414
G S V
Sbjct: 498 PGHSQV 503
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 220/499 (44%), Gaps = 112/499 (22%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
RR + NQ+TF L AC +A +G VQVH +VK GF +++V++ALI +Y +C
Sbjct: 219 RREGNQSNQYTFPSVLTACASVSACRVG--VQVHCCIVKSGFKTNIYVQSALIDMYAKC- 275
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDV-------- 136
+ES + + E E DVV+WNS++ G VR G I +A +F M ERD+
Sbjct: 276 REMESARALLEGME---VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIP 332
Query: 137 -------VSWSTMIMG-------------------------YVQNGLLEDGLECFSVMRE 164
+S + M + Y + G+++ L+ F M E
Sbjct: 333 SILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE 392
Query: 165 K-------------------------------GIRPNEXXXXXXXXXXXXXXXXECGRFV 193
K GI P++ E G+ V
Sbjct: 393 KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQV 452
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H F ++ V +LV MY KCG +E + +F S+ +D+ TW +I G A +GL
Sbjct: 453 HGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLL 512
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
+DA +RYF+ M YGI P EHY C
Sbjct: 513 EDA-----------------------------------QRYFDSMRTVYGITPGPEHYAC 537
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMH 373
M+DL R+G + L+ M VEPD +W +L A + HG ++ GE+ L++L+P +
Sbjct: 538 MIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNN 597
Query: 374 DGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCS 433
YVQL+ +Y+ A + ++ VR+LM + K G S VE +G +H F++ D+ H
Sbjct: 598 AVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRM 657
Query: 434 SDIYRMLETIGQGITAAGY 452
+IY ++ + I AGY
Sbjct: 658 VEIYSKVDEMMLLIKEAGY 676
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 47/339 (13%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+KPN++T L CT L G Q+H H +K GF DV V N L+ +Y +C
Sbjct: 121 IKPNEYTLGSVLRMCTSLVL--LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQC----- 173
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP-ERDVVSWSTMIMGYV 147
KR+ E AE +F+ M E++ V+W++M+ GY
Sbjct: 174 --KRISE----------------------------AEYLFETMEGEKNNVTWTSMLTGYS 203
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
QNG +ECF +R +G + N+ G VH I F+ +
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
V +AL+DMYAKC +E +RAL E + D+ +WN MI G GL +AL++F +
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY----GCMVDLLARAGL 323
+ T +LN ++ S + C ++ Y +VD+ A+ G+
Sbjct: 324 MKIDDFTIPSILNCFAL----SRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGI 379
Query: 324 VDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKI 362
+D A+ + E M +E D + W L+ +G D K+
Sbjct: 380 MDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKL 417
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 9/272 (3%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
D TWN+++ + + DAEK+F P ++ +SW+ +I GY ++G + F M+
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
GI+PNE G +H F + V V L+ MYA+C I
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 224 KSRALFESISG-KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC 282
++ LFE++ G K+ TW M+ G + +G A A+ F EG TF VL AC
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL 342
+ G + +V G + + ++D+ A+ ++ A L+E M V+ D V
Sbjct: 238 ASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVS 295
Query: 343 WATLLDACKVHGFVDMGEKIGNKLIQLDPMHD 374
W +++ C G IG L MH+
Sbjct: 296 WNSMIVGCVRQGL------IGEALSMFGRMHE 321
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 221/464 (47%), Gaps = 65/464 (14%)
Query: 49 SGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG------------------------ 84
S L +G+++HA+V+K G+ ++ V N LI +Y +C
Sbjct: 400 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 459
Query: 85 ----------SSVESFKRVFE---EEEDTLCSDVVTWNSVLAG----------------- 114
++E F+ V + E ++ + ++ +SVL
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL 519
Query: 115 --VVRN------GEIRD---AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
V++N G+ R+ A +VF+ + +DVVSW++MI NG + +E F M
Sbjct: 520 DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV 579
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
E G+ + GR +H + F + + A+VDMYA CG ++
Sbjct: 580 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 639
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
++A+F+ I K + + MI HG K A+ LF K E P +++F+ +L ACS
Sbjct: 640 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 699
Query: 284 MGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLW 343
GL+ EG+ + +M Y ++P EHY C+VD+L RA V EA ++ M EP +W
Sbjct: 700 HAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVW 759
Query: 344 ATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEK 403
LL AC+ H ++GE +L++L+P + G+ V ++ ++A+ +W DV +VR M
Sbjct: 760 CALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS 819
Query: 404 VSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGI 447
+K G S +E++G +H F A DK H S +IY L + + +
Sbjct: 820 GMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 863
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 140/353 (39%), Gaps = 51/353 (14%)
Query: 7 KANSP---PSESIAIYSAMLR---RRRFVKPNQ---HTFTFALHACTKRAASGLGSGVQV 57
++N P PS +A + +L +R V N F + L C KR A + G Q+
Sbjct: 45 QSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRA--VSQGRQL 102
Query: 58 HAHVVKL--GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGV 115
H+ + K F D F+ L+ +Y +CGS
Sbjct: 103 HSRIFKTFPSFELD-FLAGKLVFMYGKCGS------------------------------ 131
Query: 116 VRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXX 175
+ DAEKVFDEMP+R +W+TMI YV NG L + MR +G+
Sbjct: 132 -----LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 186
Query: 176 XXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK 235
G +HS + L + T + ALV MYAK + +R LF+ K
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 236 -DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRY 294
D WN ++ ++ G + + L LF + G P + T V L AC GK
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 306
Query: 295 FNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
++ E+ ++ + R G + +A ++ M D V W +L+
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLG-FARDVFVRNALIHLYCECGSSVES 89
PN +T AL AC + + LG ++HA V+K + +++V NALI +Y C
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGK--EIHASVLKSSTHSSELYVCNALIAMYTRC------ 333
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN 149
G++ AE++ +M DVV+W+++I GYVQN
Sbjct: 334 -----------------------------GKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
+ ++ LE FS M G + +E G +H+ + + + VG
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALF 260
L+DMY+KC F + KD+ +W +I G A + +AL LF
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 157/383 (40%), Gaps = 49/383 (12%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
+N P+ ++A+Y M R V +F L AC K + SG ++H+ +VKLG+
Sbjct: 159 SNGEPASALALYWNM--RVEGVPLGLSSFPALLKACAK--LRDIRSGSELHSLLVKLGYH 214
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
F+ NAL+ +Y +N ++ A ++
Sbjct: 215 STGFIVNALVSMY-----------------------------------AKNDDLSAARRL 239
Query: 128 FDEMPER-DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
FD E+ D V W++++ Y +G + LE F M G PN
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 187 XECGRFVH-STIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMIC 245
+ G+ +H S ++S + V AL+ MY +CG + ++ + ++ D+ TWN +I
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
G + + K+AL F ++ G V+ ++ A + G ++ +G
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK-HGWD 418
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL-----DACKVHGFVDMGE 360
++ ++D+ ++ L M + D + W T++ + C V +++
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMH-DKDLISWTTVIAGYAQNDCHVEA-LELFR 476
Query: 361 KIGNKLIQLDPMHDGHYVQLAGI 383
+ K +++D M G ++ + +
Sbjct: 477 DVAKKRMEIDEMILGSILRASSV 499
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 6/168 (3%)
Query: 190 GRFVHSTIESL--KFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
GR +HS I F + G LV MY KCG ++ + +F+ + + + WN MI
Sbjct: 99 GRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNV-TFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
S+G ALAL+ EG +P+ + +F +L AC+ + G +L+V G
Sbjct: 158 VSNGEPASALALYWNMRVEG-VPLGLSSFPALLKACAKLRDIRSGSELHSLLVK-LGYHS 215
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
+V + A+ + A L + + D VLW ++L + G
Sbjct: 216 TGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 205/426 (48%), Gaps = 47/426 (11%)
Query: 34 HTFTFALHACTKRAASGLGS---GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
HTF L RA++GLGS G Q+H +KLG + FV LI +Y +CG
Sbjct: 225 HTFAVML-----RASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG------ 273
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
+I DA F+ MPE+ V+W+ +I GY +G
Sbjct: 274 -----------------------------DIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 151 LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGT 210
E+ L MR+ G+ ++ E + H+++ F + T
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 211 ALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIP 270
ALVD Y+K G ++ +R +F+ + K+I +WN ++ G A+HG DA+ LF K ++ P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 271 VNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHL 330
+VTF+ VL+AC+ GL +G F M + +GI+P HY CM++LL R GL+DEA+
Sbjct: 425 NHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAF 484
Query: 331 IETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKW 390
I ++ +WA LL+AC++ +++G + KL + P G+YV + +Y K
Sbjct: 485 IRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKT 544
Query: 391 EDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK----DHDCSSDIYRMLETIGQG 446
+ V + + K + + VE+ H F++GD+ + IY+ ++ + +
Sbjct: 545 AEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEE 604
Query: 447 ITAAGY 452
I+ GY
Sbjct: 605 ISEYGY 610
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 6/268 (2%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
N +L V+ G I DA ++FDE+PER++ S+ ++I G+V G + E F +M E+
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
G+ +H L V L+DMY+KCG IE +R
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 229 FESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTF-VGVLNACSMGGL 287
FE + K WN +I G A HG +++AL L + G T + + + + L
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
+ + +L+ + G + E+ +VD ++ G VD A ++ + + + + W L+
Sbjct: 342 ELTKQAHASLIRN--GFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALM 398
Query: 348 DACKVHGFVDMGEKIGNKLIQLD--PMH 373
HG K+ K+I + P H
Sbjct: 399 GGYANHGRGTDAVKLFEKMIAANVAPNH 426
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V +Q T + + TK A L Q HA +++ GF ++ AL+ Y + G V+
Sbjct: 321 VSIDQFTLSIMIRISTKLAKLELTK--QAHASLIRNGFESEIVANTALVDFYSKWGR-VD 377
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDV----VSWSTMIM 144
+ + VF++ ++++WN+++ G +G DA K+F++M +V V++ ++
Sbjct: 378 TARYVFDKLPR---KNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLS 434
Query: 145 GYVQNGLLEDGLECFSVMRE-KGIRP 169
+GL E G E F M E GI+P
Sbjct: 435 ACAYSGLSEQGWEIFLSMSEVHGIKP 460
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 214/455 (47%), Gaps = 35/455 (7%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA- 67
N E++ ++ M + V PN T +AC G Q+HA V+ G+
Sbjct: 275 NELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWET 334
Query: 68 --RDVFVRNALIHLYCECG---SSVESFKRVFE-----------------EEEDTL---- 101
D + +L+H+Y G S+ F+ E +TL
Sbjct: 335 VDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERV 394
Query: 102 --CSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF 159
D V+W S++ G + G++ A +F ++ ++D V+W+ MI G VQN L +
Sbjct: 395 KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLL 454
Query: 160 SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLK--FRITVPVGTALVDMYA 217
S M G++P + G+ +H I + + + +LV MYA
Sbjct: 455 SDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYA 514
Query: 218 KCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVG 277
KCG IE + +F + KD +WN MI GL+ HGLA AL LF + L G P +VTF+G
Sbjct: 515 KCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLG 574
Query: 278 VLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE 337
VL+ACS GL++ G F M + Y IQP ++HY M+DLL RAG + EA I +
Sbjct: 575 VLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFT 634
Query: 338 PDPVLWATLLDACKVH----GFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDV 393
PD ++ LL C ++ + E+ +L++LDP++ +V L +YA + +
Sbjct: 635 PDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDME 694
Query: 394 VRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
+RK M K KK G S V + G + F++GDK
Sbjct: 695 KEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDK 729
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 146/362 (40%), Gaps = 78/362 (21%)
Query: 67 ARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEK 126
+RDV NA+I Y E +E K +F + + +VVTW S++ G R G++R+A +
Sbjct: 197 SRDVVSWNAMIKGYIE-NDGMEEAKLLFGDMSE---KNVVTWTSMVYGYCRYGDVREAYR 252
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE--KGIRPNEXXXXXXXXX--XX 182
+F EMPER++VSW+ MI G+ N L + L F M++ + PN
Sbjct: 253 LFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGL 312
Query: 183 XXXXXECGRFVHSTIESLKFRITVPVG---TALVDMYAKCGCI----------------- 222
G +H+ + S + G +LV MYA G I
Sbjct: 313 GVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCN 372
Query: 223 ------------EKSRALFE---SISGKDIW----------------------------- 238
E++ LFE S+ K W
Sbjct: 373 IIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV 432
Query: 239 TWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
TW VMI GL + L +A +L + G P+N T+ +L++ + +GK ++
Sbjct: 433 TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVI 492
Query: 299 VD---CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
CY P++ +V + A+ G +++A + M V+ D V W +++ HG
Sbjct: 493 AKTTACY--DPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHGL 549
Query: 356 VD 357
D
Sbjct: 550 AD 551
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 47/228 (20%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
++V ++ C+ G S ++ + +F+E + +VV+WN+++ G++RNG++ A++V
Sbjct: 136 KNVVSWTVMLTALCDDGRSEDAVE-LFDEMPE---RNVVSWNTLVTGLIRNGDMEKAKQV 191
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
FD MP RDVVSW+ MI GY++N +E+ F M EK
Sbjct: 192 FDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK---------------------- 229
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
V T++V Y + G + ++ LF + ++I +W MI G
Sbjct: 230 -----------------NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGF 272
Query: 248 ASHGLAKDALALFHKFLS--EGFIPVNVTFVGVLNACSMGGLVSEGKR 293
A + L ++AL LF + + P T + + AC GGL E +R
Sbjct: 273 AWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC--GGLGVEFRR 318
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 213/445 (47%), Gaps = 40/445 (8%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P +++++ M R V PN++TF AC+ A S +G +HA + G R++
Sbjct: 111 PQNALSMFQKM-HEDRPVPPNEYTFASVFKACSALAESRIGK--NIHARLEISGLRRNIV 167
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V ++L+ +Y +C + VE+ +RVF+ + G RN
Sbjct: 168 VSSSLVDMYGKC-NDVETARRVFDS---------------MIGYGRN------------- 198
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE--KGIRPNEXXXXXXXXXXXXXXXXEC 189
VVSW++MI Y QN + +E F R N+ +
Sbjct: 199 ----VVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQW 254
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
G+ H + + V T+L+DMYAKCG + + +F I + ++ MI A
Sbjct: 255 GKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAK 314
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
HGL + A+ LF + ++ P VT +GVL+ACS GLV+EG Y +LM + YG+ P+
Sbjct: 315 HGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSR 374
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTV--EPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
HY C+VD+L R G VDEA L +T+ V E +LW LL A ++HG V++ + +LI
Sbjct: 375 HYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLI 434
Query: 368 QLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGD 427
Q + Y+ L+ YA + WED +R M + K S +E + ++ F AGD
Sbjct: 435 QSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGD 494
Query: 428 KDHDCSSDIYRMLETIGQGITAAGY 452
D S +I R L+ + + + G+
Sbjct: 495 LSCDESGEIERFLKDLEKRMKERGH 519
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 132/297 (44%), Gaps = 38/297 (12%)
Query: 101 LCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFS 160
SD T N ++ V+ EI A K+FDEM E +VVSW+++I GY G ++ L F
Sbjct: 60 FASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQ 119
Query: 161 VMRE-KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKC 219
M E + + PNE G+ +H+ +E R + V ++LVDMY KC
Sbjct: 120 KMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKC 179
Query: 220 GCIEKSRALFESI--SGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFV- 276
+E +R +F+S+ G+++ +W MI A + +A+ LF F + F+
Sbjct: 180 NDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFML 239
Query: 277 -GVLNAC-SMG---------GLVSEGKRYFNLMV-----DCYGIQPEME----------- 309
V++AC S+G GLV+ G N +V D Y +
Sbjct: 240 ASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC 299
Query: 310 ----HYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMG 359
Y M+ A+ GL + AV L + M + P+ V +L AC G V+ G
Sbjct: 300 HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEG 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MI +A+ N+ E+I ++ + + NQ + AC+ + L G H
Sbjct: 205 MITAYAQ-NARGHEAIELFRSFNAALTSDRANQFMLASVISACS--SLGRLQWGKVAHGL 261
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
V + G+ + V +L+ +Y +CGS + +++F C V+++ S++ ++G
Sbjct: 262 VTRGGYESNTVVATSLLDMYAKCGS-LSCAEKIFLR---IRCHSVISYTSMIMAKAKHGL 317
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYV----QNGLLEDGLECFSVMREK-GIRPN 170
A K+FDEM + ++G + +GL+ +GLE S+M EK G+ P+
Sbjct: 318 GEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPD 372
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 219/429 (51%), Gaps = 38/429 (8%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
+R V+PN T + L AC+K + +++HA++++ ++ V N+L+ Y
Sbjct: 420 KREVEPNVVTLSGVLRACSK--LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYA---- 473
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
S ++V WN V+R+ M RD +++++++
Sbjct: 474 ---SSRKV-----------DYAWN-----VIRS------------MKRRDNITYTSLVTR 502
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
+ + G E L + M GIR ++ E G+ +H F
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGA 562
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
V +LVDMY+KCG +E ++ +FE I+ D+ +WN ++ GLAS+G AL+ F +
Sbjct: 563 ASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRM 622
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
+ P +VTF+ +L+ACS G L G YF +M Y I+P++EHY +V +L RAG ++
Sbjct: 623 KETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLE 682
Query: 326 EAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYA 385
EA ++ETM ++P+ +++ TLL AC+ G + +GE + NK + L P Y+ LA +Y
Sbjct: 683 EATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYD 742
Query: 386 KARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDH-DCSSDIYRMLETIG 444
++ K E + R LM EK K G S VE++G +H FV+ D D ++ IY +E+I
Sbjct: 743 ESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIK 802
Query: 445 QGITAAGYP 453
+ I G P
Sbjct: 803 EEIKRFGSP 811
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 147/342 (42%), Gaps = 57/342 (16%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ YS M++ V PN+ TF L A + GL G +H++++ G +V ++
Sbjct: 208 EALQFYSEMVKAG--VPPNEFTFVKLLGASS---FLGLEFGKTIHSNIIVRGIPLNVVLK 262
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
+L+ Y + ++ DA +V + E
Sbjct: 263 TSLVDFYSQFS-----------------------------------KMEDAVRVLNSSGE 287
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+DV W++++ G+V+N ++ + F MR G++PN + G+ +
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGC--IEKSRALFESISGKDIWTWNVMICGLASHG 251
HS + F + VG ALVDMY KC +E SR +F ++ ++ +W +I GL HG
Sbjct: 348 HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR-VFGAMVSPNVVSWTTLILGLVDHG 406
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG------IQ 305
+D L + + P VT GVL ACS R+ +++ + +
Sbjct: 407 FVQDCFGLLMEMVKREVEPNVVTLSGVLRACS-------KLRHVRRVLEIHAYLLRRHVD 459
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
EM +VD A + VD A ++I +M D + + +L+
Sbjct: 460 GEMVVGNSLVDAYASSRKVDYAWNVIRSMK-RRDNITYTSLV 500
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 8/248 (3%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
N++L+ ++ I +A K+FDEM R V +W+ MI + ++ L F M G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
PNE G VH ++ F VG++L D+Y+KCG +++ L
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 229 FESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLV 288
F S+ D +W +MI L ++AL + + + G P TFV +L A S GL
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLE 241
Query: 289 SEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLD 348
+ N++V GI + +VD ++ +++AV ++ + + E D LW ++
Sbjct: 242 FGKTIHSNIIVR--GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSV-- 296
Query: 349 ACKVHGFV 356
V GFV
Sbjct: 297 ---VSGFV 301
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 156/380 (41%), Gaps = 41/380 (10%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
PN+ TF+ + +C + G +VH V+K GF + V ++L LY +CG
Sbjct: 122 PNEFTFSSVVRSCA--GLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCG------ 173
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
+ ++A ++F + D +SW+ MI V
Sbjct: 174 -----------------------------QFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 151 LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGT 210
+ L+ +S M + G+ PNE E G+ +HS I + V + T
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKT 263
Query: 211 ALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIP 270
+LVD Y++ +E + + S +D++ W ++ G + AK+A+ F + S G P
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 271 VNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHL 330
N T+ +L+ CS + GK+ + + G + + +VD+ + +
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASR 382
Query: 331 IETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKW 390
+ V P+ V W TL+ HGFV + G + + + + V L+G+ K
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHGFVQ--DCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 391 EDVVRVRKLMIEKVSKKVAG 410
V RV ++ + + V G
Sbjct: 441 RHVRRVLEIHAYLLRRHVDG 460
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 37/220 (16%)
Query: 212 LVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
L+ +Y K I +R LF+ +S + ++ W VMI AL+LF + ++ G P
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 272 NVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLI 331
TF V+ +C+ +S G R ++ G + + DL ++ G EA L
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKT-GFEGNSVVGSSLSDLYSKCGQFKEACELF 182
Query: 332 ETMT----------------------------------VEPDPVLWATLLDACKVHGFVD 357
++ V P+ + LL A G ++
Sbjct: 183 SSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LE 241
Query: 358 MGEKI-GNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRV 396
G+ I N +++ P++ L Y++ K ED VRV
Sbjct: 242 FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 191/383 (49%), Gaps = 39/383 (10%)
Query: 66 FARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAE 125
F ++V N++I Y + G V S + +F++ +D D ++WN+++ G V + DA
Sbjct: 277 FCKNVVSWNSMIKAYLKVGDVV-SARLLFDQMKD---RDTISWNTMIDGYVHVSRMEDAF 332
Query: 126 KVFDEMPERDVVSWSTMIMGYVQNGLLE-------------------------------D 154
+F EMP RD SW+ M+ GY G +E +
Sbjct: 333 ALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKE 392
Query: 155 GLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT-VPVGTALV 213
++ F M +G +P+ G +H + +K I VPV AL+
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV--VKTVIPDVPVHNALI 450
Query: 214 DMYAKCGCIEKSRALFESISGK-DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN 272
MY++CG I +SR +F+ + K ++ TWN MI G A HG A +AL LF S G P +
Sbjct: 451 TMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSH 510
Query: 273 VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIE 332
+TFV VLNAC+ GLV E K F M+ Y I+P+MEHY +V++ + G +EA+++I
Sbjct: 511 ITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIIT 570
Query: 333 TMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWED 392
+M EPD +W LLDAC+++ V + + +L+P YV L +YA W++
Sbjct: 571 SMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDE 630
Query: 393 VVRVRKLMIEKVSKKVAGWSLVE 415
+VR M K KK G S V+
Sbjct: 631 ASQVRMNMESKRIKKERGSSWVD 653
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 179/449 (39%), Gaps = 88/449 (19%)
Query: 68 RDVFVRNALIHLYCECGS--SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAE 125
RDV N +I Y CG +E +++F+E D +WN++++G +N I +A
Sbjct: 100 RDVVTWNTMISGYVSCGGIRFLEEARKLFDE---MPSRDSFSWNTMISGYAKNRRIGEAL 156
Query: 126 KVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRP----NEXXXXXXXXXX 181
+F++MPER+ VSWS MI G+ QNG ++ + F M K P
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSE 216
Query: 182 XXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISG------- 234
+ G V + + T+ VG Y + G +E +R LF+ I
Sbjct: 217 AAWVLGQYGSLVSGREDLVYAYNTLIVG------YGQRGQVEAARCLFDQIPDLCGDDHG 270
Query: 235 --------KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMG- 285
K++ +WN MI G A LF + I N G ++ M
Sbjct: 271 GEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMED 330
Query: 286 --GLVSE----GKRYFNLMVDCYGIQPEME---HY------------GCMVDLLARAGLV 324
L SE +N+MV Y +E HY ++ +
Sbjct: 331 AFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDY 390
Query: 325 DEAVHLIETMTVE---PDPVLWATLLDACKVHGFVDMGEKIGNKLIQL--------DPMH 373
EAV L M +E PDP +LL A G V++ ++G ++ Q+ P+H
Sbjct: 391 KEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNL--RLGMQMHQIVVKTVIPDVPVH 446
Query: 374 DGHYVQLAGIYAKARKWEDVVRVRKLMIE-KVSKKVAGWSLVELEGGIHHFVAGDKDHDC 432
+ L +Y++ +++ R++ E K+ ++V W+ + + G H
Sbjct: 447 NA----LITMYSRC---GEIMESRRIFDEMKLKREVITWNAM---------IGGYAFHGN 490
Query: 433 SSDIYRMLETIGQGITAAGYPSVHLTCVA 461
+S+ L G + YPS H+T V+
Sbjct: 491 ASEA---LNLFGSMKSNGIYPS-HITFVS 515
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 149/370 (40%), Gaps = 80/370 (21%)
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
+ +FE+ E + VTWN++++G V+ E+ A K+FD MP+RDVV+W+TMI GYV G
Sbjct: 60 RDIFEKLE---ARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCG 116
Query: 151 ---LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
LE+ + F M + +S +
Sbjct: 117 GIRFLEEARKLFDEMPSR--------------------------------DSFSW----- 139
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
++ YAK I ++ LFE + ++ +W+ MI G +G A+ LF K +
Sbjct: 140 --NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKD 197
Query: 268 FIPVNVTFVGVLNACSM----------GGLVS--EGKRY-FNLMVDCYGIQPEMEHYGCM 314
P+ G++ + G LVS E Y +N ++ YG + ++E C+
Sbjct: 198 SSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCL 257
Query: 315 VDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD 374
D + D E + V W +++ A ++ +G+ + +L+ D M D
Sbjct: 258 FDQIPDLCGDDHGGEFRERFC--KNVVSWNSMIKA-----YLKVGDVVSARLL-FDQMKD 309
Query: 375 GHYVQLAGI---YAKARKWEDVVRVRKLMIEKVSKKVAGWSLV--------ELEGGIHHF 423
+ + Y + ED L E ++ W+++ +E H+F
Sbjct: 310 RDTISWNTMIDGYVHVSRMEDAF---ALFSEMPNRDAHSWNMMVSGYASVGNVELARHYF 366
Query: 424 VAGDKDHDCS 433
+ H S
Sbjct: 367 EKTPEKHTVS 376
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 199/379 (52%), Gaps = 50/379 (13%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGS---GVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
VKP++ TF L AC G+GS G +H +VK GF DV+V NAL+ +Y +CG
Sbjct: 191 VKPDRFTFPRVLKAC-----GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
V++ + VF+ D V+WNS+L G
Sbjct: 246 IVKA-RNVFDM---IPHKDYVSWNSMLT-------------------------------G 270
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
Y+ +GLL + L+ F +M + GI P++ + GR +H +
Sbjct: 271 YLHHGLLHEALDIFRLMVQNGIEPDK---VAISSVLARVLSFKHGRQLHGWVIRRGMEWE 327
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
+ V AL+ +Y+K G + ++ +F+ + +D +WN +I ++H + L F +
Sbjct: 328 LSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQMHR 384
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
P +TFV VL+ C+ G+V +G+R F+LM YGI P+MEHY CMV+L RAG+++
Sbjct: 385 ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 326 EAVHLI-ETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIY 384
EA +I + M +E P +W LL AC +HG D+GE +L +L+P ++ ++ L IY
Sbjct: 445 EAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIY 504
Query: 385 AKARKWEDVVRVRKLMIEK 403
+KA++ EDV RVR++M+++
Sbjct: 505 SKAKRAEDVERVRQMMVDR 523
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 127/280 (45%), Gaps = 11/280 (3%)
Query: 124 AEKVFDEMPERDV--VSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXX 181
A +VFD M +RD +W+++I GY + G ED + + M E G++P+
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 182 XXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWN 241
+ G +H + F V V ALV MYAKCG I K+R +F+ I KD +WN
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 242 VMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC 301
M+ G HGL +AL +F + G P V VL L + R + V
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARV----LSFKHGRQLHGWVIR 321
Query: 302 YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEK 361
G++ E+ ++ L ++ G + +A + + M +E D V W ++ A H G K
Sbjct: 322 RGMEWELSVANALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISA---HSKNSNGLK 377
Query: 362 IGNKLIQLDPMHDG-HYVQLAGIYAKARKWEDVVRVRKLM 400
++ + + DG +V + + A ED R+ LM
Sbjct: 378 YFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLM 417
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD--IWTWNVMICGL 247
G VH I R + + + LV +YA CG E + +F+ +S +D + WN +I G
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY 170
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR-YFNLMVDCYGIQP 306
A G +DA+AL+ + +G P TF VL AC G V G+ + +L+ + +G
Sbjct: 171 AELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY-- 228
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKL 366
++ +V + A+ G + +A ++ + M D V W ++L HG + I +
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFD-MIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLM 287
Query: 367 IQ 368
+Q
Sbjct: 288 VQ 289
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 222/439 (50%), Gaps = 12/439 (2%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E A+ A+ +K ++H+F L+ + + L G +VHA V+K G + FV
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLS--SLKSLKIGKEVHARVLKNGSYSNKFVS 298
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCS--DVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
+ ++ +YC+CG+ + E L ++ + +S++ G G++ +A+++FD +
Sbjct: 299 SGIVDVYCKCGN------MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSL 352
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLE-CFSVMREKGIRPNEXXXXXXXXXXXXXXXXECG 190
E+++V W+ M +GY+ + LE + + + P+ E G
Sbjct: 353 SEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPG 412
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASH 250
+ +H + + TA VDMY+KCG +E + +F+S +D +N MI G A H
Sbjct: 413 KEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHH 472
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH 310
G + F GF P +TF+ +L+AC GLV EG++YF M++ Y I PE H
Sbjct: 473 GHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGH 532
Query: 311 YGCMVDLLARAGLVDEAVHLIETM-TVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
Y CM+DL +A +D+A+ L+E + VE D V+ L+AC + ++ +++ KL+ +
Sbjct: 533 YTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVI 592
Query: 370 DPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKD 429
+ + Y+Q+A YA + +W+++ R+R M K + +G S ++ H F + D
Sbjct: 593 EGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDIS 652
Query: 430 HDCSSDIYRMLETIGQGIT 448
H + IY ML + + ++
Sbjct: 653 HYETEAIYAMLHFVTKDLS 671
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 187/464 (40%), Gaps = 81/464 (17%)
Query: 6 AKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAA--SGLGSGVQVHAHVVK 63
AK + SE+I ++ M R+ K + F + K +A + + G Q+H +VK
Sbjct: 97 AKTDGCESEAIEMFGEMHRKE---KDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVK 153
Query: 64 LGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCS--DVVTWNSVLAGVVRNGEI 121
G F ++LIH+Y +CG FK V + D V N+++A R G+I
Sbjct: 154 TGNDGTKFAVSSLIHMYSKCGK----FKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDI 209
Query: 122 RDAEKVFDEMPE-RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
A VF PE D +SW+T+I GY QNG E+ L+ M E G++ +E
Sbjct: 210 DKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNV 269
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE----------------- 223
+ G+ VH+ + V + +VD+Y KCG ++
Sbjct: 270 LSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSA 329
Query: 224 --------------KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL-SEGF 268
+++ LF+S+S K++ W M G + L L F+ +E
Sbjct: 330 SSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETN 389
Query: 269 IPVNVTFVGVLNACSMGGLVSEG---------------KRYFNLMVDCYGIQPEMEH--- 310
P ++ V VL ACS+ + G K+ VD Y +E+
Sbjct: 390 TPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAER 449
Query: 311 ------------YGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGF 355
Y M+ A G ++ E MT +PD + + LL AC+ G
Sbjct: 450 IFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGL 509
Query: 356 VDMGEKIGNKLIQ---LDPMHDGHYVQLAGIYAKARKWEDVVRV 396
V GEK +I+ + P GHY + +Y KA + + + +
Sbjct: 510 VLEGEKYFKSMIEAYNISP-ETGHYTCMIDLYGKAYRLDKAIEL 552
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 43/272 (15%)
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNS 110
L G H +K G N L++LY + G E+ + VF+E L +V +WN+
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREA-RNVFDE---MLERNVYSWNA 59
Query: 111 VLAGVVRNGEIRDAEKVFD-EMPERDVVSWSTMIMGYVQ-NGLLEDGLECFSVMREK--- 165
V+A V+ +++A ++F+ + ERD+++++T++ G+ + +G + +E F M K
Sbjct: 60 VIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKD 119
Query: 166 GIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCG----- 220
I ++ G +H + T ++L+ MY+KCG
Sbjct: 120 DIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEV 179
Query: 221 -------CIE---------------------KSRALF-ESISGKDIWTWNVMICGLASHG 251
C+E K+ ++F + D +WN +I G A +G
Sbjct: 180 CNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNG 239
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
++AL + G +F VLN S
Sbjct: 240 YEEEALKMAVSMEENGLKWDEHSFGAVLNVLS 271
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 190/399 (47%), Gaps = 38/399 (9%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G VH +V++ G+ D N+LI +Y +CG
Sbjct: 365 GASVHGYVLRHGYTLDTPALNSLITMYAKCG----------------------------- 395
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRP-NEX 172
+ + +F+ M ERD+VSW+ +I GY QN L L F M+ K ++ +
Sbjct: 396 ------HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSF 449
Query: 173 XXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESI 232
G+ +H + R V TALVDMY+KCG +E ++ F+SI
Sbjct: 450 TVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI 509
Query: 233 SGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK 292
S KD+ +W ++I G HG AL ++ +FL G P +V F+ VL++CS G+V +G
Sbjct: 510 SWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGL 569
Query: 293 RYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKV 352
+ F+ MV +G++P EH C+VDLL RA +++A + P + +LDAC+
Sbjct: 570 KIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRA 629
Query: 353 HGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
+G ++ + I +I+L P GHYV+L +A ++W+DV M KK+ GWS
Sbjct: 630 NGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWS 689
Query: 413 LVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAG 451
+E+ G F H S D +L+ + + + G
Sbjct: 690 KIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 57 VHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVV 116
+H V GF D+ V N++++LYC+C
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCD-------------------------------- 193
Query: 117 RNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
+ DA+ +FD+M +RD+VSW+TMI GY G + + L+ MR G+RP++
Sbjct: 194 ---HVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD 236
E GR +H I F + + + TAL+ MY KCG E S + E+I KD
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKD 310
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
+ W VMI GL G A+ AL +F + L G + V+ +C+ G G
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG 370
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL-------DA 349
++ +G + ++ + A+ G +D+++ + E M E D V W ++ D
Sbjct: 371 YVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISGYAQNVDL 428
Query: 350 CK 351
CK
Sbjct: 429 CK 430
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 175/420 (41%), Gaps = 77/420 (18%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
++P+Q TF +L L G +H +VK GF D+ ++ ALI +Y +CG
Sbjct: 241 LRPDQQTFGASLS--VSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEA 298
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
S++ V + +P +DVV W+ MI G ++
Sbjct: 299 SYR-----------------------------------VLETIPNKDVVCWTVMISGLMR 323
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
G E L FS M + G + + G VH + + + P
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA 383
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
+L+ MYAKCG ++KS +FE ++ +D+ +WN +I G A + AL LF + +
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTV 443
Query: 269 IPVN-VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
V+ T V +L ACS G + GK +++ + I+P +VD+ ++ G ++ A
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAA 502
Query: 328 VHLIETMT----------------------------------VEPDPVLWATLLDACKVH 353
++++ +EP+ V++ +L +C +
Sbjct: 503 QRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHN 562
Query: 354 GFVDMGEKIGNKLIQ---LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAG 410
G V G KI + +++ ++P H+ H + + +A++ ED + K + S V G
Sbjct: 563 GMVQQGLKIFSSMVRDFGVEPNHE-HLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLG 621
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 147/344 (42%), Gaps = 46/344 (13%)
Query: 5 HAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKL 64
H ++ + ++ +S+ML + + P+ TF L AC + L G+ +H V+
Sbjct: 20 HLSSHGDHKQVLSTFSSMLANK--LLPDTFTFPSLLKACA--SLQRLSFGLSIHQQVLVN 75
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
GF+ D ++ ++L++LY + G + A
Sbjct: 76 GFSSDFYISSSLVNLY-----------------------------------AKFGLLAHA 100
Query: 125 EKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXX 184
KVF+EM ERDVV W+ MI Y + G++ + + MR +GI+P
Sbjct: 101 RKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEI 160
Query: 185 XXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMI 244
+C +H F + V +++++Y KC + ++ LF+ + +D+ +WN MI
Sbjct: 161 TQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMI 217
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC-SMGGLVSEGKRYFNLMVDCYG 303
G AS G + L L ++ +G P TF L+ +M L E R + + G
Sbjct: 218 SGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDL--EMGRMLHCQIVKTG 275
Query: 304 IQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
+M ++ + + G + + ++ET+ D V W ++
Sbjct: 276 FDVDMHLKTALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMI 318
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 174/328 (53%), Gaps = 6/328 (1%)
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
S +R F ++ D L + S++ V+ + +A K+F+ +R+VV W+T+I G+ +
Sbjct: 236 SIRRSFIDQSDYLQA------SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAK 289
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
+ + F M + I PN+ G+ VH + +
Sbjct: 290 CERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVN 349
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
T+ +DMYA+CG I+ +R +F+ + +++ +W+ MI +GL ++AL FHK S+
Sbjct: 350 FTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNV 409
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAV 328
+P +VTFV +L+ACS G V EG + F M YG+ PE EHY CMVDLL RAG + EA
Sbjct: 410 VPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAK 469
Query: 329 HLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKAR 388
I+ M V+P W LL AC++H VD+ +I KL+ ++P YV L+ IYA A
Sbjct: 470 SFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAG 529
Query: 389 KWEDVVRVRKLMIEKVSKKVAGWSLVEL 416
WE V VR+ M K +K G S E+
Sbjct: 530 MWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 153/349 (43%), Gaps = 48/349 (13%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLG---SGVQVHAHVVKLGFARD 69
S+ + +Y+ M RR + FA+ AC GLG +G+ +H +K G +D
Sbjct: 91 SDVLLLYNRM--RRHCDGVDSFNLVFAIKACV-----GLGLLENGILIHGLAMKNGLDKD 143
Query: 70 VFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFD 129
+V +L+ +Y + G+ + A+KVFD
Sbjct: 144 DYVAPSLVEMYAQLGT-----------------------------------MESAQKVFD 168
Query: 130 EMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
E+P R+ V W ++ GY++ + F +MR+ G+ + +
Sbjct: 169 EIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKV 228
Query: 190 GRFVHS-TIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
G+ VH +I + + +++DMY KC ++ +R LFE+ +++ W +I G A
Sbjct: 229 GKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFA 288
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
A +A LF + L E +P T +L +CS G + GK M+ GI+ +
Sbjct: 289 KCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIR-NGIEMDA 347
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
++ +D+ AR G + A + + M E + + W+++++A ++G +
Sbjct: 348 VNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINAFGINGLFE 395
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 39/157 (24%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+ ++ MLR + PNQ T L +C+ + L G VH ++++ G D
Sbjct: 295 EAFDLFRQMLRES--ILPNQCTLAAILVSCS--SLGSLRHGKSVHGYMIRNGIEMDAVNF 350
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
+ I +Y CG+ I+ A VFD MPE
Sbjct: 351 TSFIDMYARCGN-----------------------------------IQMARTVFDMMPE 375
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN 170
R+V+SWS+MI + NGL E+ L+CF M+ + + PN
Sbjct: 376 RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPN 412
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 103/248 (41%), Gaps = 5/248 (2%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMP--ERDVVSWSTMIMGYVQNGL--LEDGLECF 159
+VV +S+ +++ + A F+ +P +R+ SW+T++ GY ++ D L +
Sbjct: 38 EVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLY 97
Query: 160 SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKC 219
+ MR + E G +H V +LV+MYA+
Sbjct: 98 NRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 220 GCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVL 279
G +E ++ +F+ I ++ W V++ G + + LF G +T + ++
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLV 217
Query: 280 NACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPD 339
AC GK + + I ++D+ + L+D A L ET +V+ +
Sbjct: 218 KACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRN 276
Query: 340 PVLWATLL 347
V+W TL+
Sbjct: 277 VVMWTTLI 284
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 195/413 (47%), Gaps = 38/413 (9%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+P+Q T T L AC++ + L G +H +V++ D++V +LI LY +CG
Sbjct: 305 TRPSQTTLTSILMACSR--SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG---- 358
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
E AE VF + + SW+ MI Y+
Sbjct: 359 -------------------------------EANLAETVFSKTQKDVAESWNVMISSYIS 387
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
G +E + M G++P+ E G+ +H +I + +
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELL 447
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
+AL+DMY+KCG +++ +F SI KD+ +W VMI SHG ++AL F + G
Sbjct: 448 LSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGL 507
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAV 328
P VT + VL+AC GL+ EG ++F+ M YGI+P +EHY CM+D+L RAG + EA
Sbjct: 508 KPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAY 567
Query: 329 HLI-ETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKA 387
+I +T + L +TL AC +H +G++I L++ P Y+ L +YA
Sbjct: 568 EIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASG 627
Query: 388 RKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRML 440
W+ RVR M E +K G S +E+ + HF A D+ H + ++Y L
Sbjct: 628 ESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 150/365 (41%), Gaps = 70/365 (19%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
P+ TF + A LG +H VVK G+ DV V ++L+ +Y +
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGR--MIHTLVVKSGYVCDVVVASSLVGMYAK-------- 154
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
F E++L +VFDEMPERDV SW+T+I + Q+G
Sbjct: 155 ---FNLFENSL------------------------QVFDEMPERDVASWNTVISCFYQSG 187
Query: 151 LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGT 210
E LE F M G PN E G+ +H F + V +
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 211 ALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIP 270
ALVDMY KC C+E +R +F+ + K + WN MI G + G +K + + ++ + EG P
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 271 VNVTFVGVLNACSMGGLVSEGKR--------------YFNL-MVDCY------------- 302
T +L ACS + GK Y N ++D Y
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 303 -GIQPEM-EHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVD 357
Q ++ E + M+ G +AV + + M V+PD V + ++L AC ++
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 358 MGEKI 362
G++I
Sbjct: 428 KGKQI 432
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 147/344 (42%), Gaps = 45/344 (13%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVES 89
+PN + T A+ AC++ L G ++H VK GF D +V +AL+ +Y +C
Sbjct: 205 EPNSVSLTVAISACSRLL--WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCD----- 257
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN 149
C +V A +VF +MP + +V+W++MI GYV
Sbjct: 258 ------------CLEV------------------AREVFQKMPRKSLVAWNSMIKGYVAK 287
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
G + +E + M +G RP++ G+F+H + + V
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVN 347
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
+L+D+Y KCG + +F +WNVMI S G A+ ++ + +S G
Sbjct: 348 CSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVK 407
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
P VTF VL ACS + +GK+ +L + ++ + ++D+ ++ G EA
Sbjct: 408 PDVVTFTSVLPACSQLAALEKGKQ-IHLSISESRLETDELLLSALLDMYSKCGNEKEAFR 466
Query: 330 LIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMH 373
+ ++ + D V W ++ A HG + L Q D M
Sbjct: 467 IFNSIP-KKDVVSWTVMISAYGSHG------QPREALYQFDEMQ 503
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 134/331 (40%), Gaps = 42/331 (12%)
Query: 40 LHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEED 99
L CT S L VH ++ LG RDV + +LI++Y C S + VFE
Sbjct: 10 LRECTNSTKS-LRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHC-SARHVFE---- 63
Query: 100 TLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF 159
N +IR DV W++++ GY +N + D LE F
Sbjct: 64 ------------------NFDIRS-----------DVYIWNSLMSGYSKNSMFHDTLEVF 94
Query: 160 SVMREKGI-RPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAK 218
+ I P+ GR +H+ + + V V ++LV MYAK
Sbjct: 95 KRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK 154
Query: 219 CGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGV 278
E S +F+ + +D+ +WN +I G A+ AL LF + S GF P +V+
Sbjct: 155 FNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVA 214
Query: 279 LNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY--GCMVDLLARAGLVDEAVHLIETMTV 336
++ACS + GK + C E++ Y +VD+ + ++ A + + M
Sbjct: 215 ISACSRLLWLERGKE---IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP- 270
Query: 337 EPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
V W +++ G +I N++I
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 176/393 (44%), Gaps = 41/393 (10%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V+PN T + C A + G +H V+ D+ + +LI +Y +C
Sbjct: 315 VRPNAVTIASLVSVCGD--ALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKC----- 367
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
KRV LC +VF + WS +I G VQ
Sbjct: 368 --KRV------DLCF----------------------RVFSGASKYHTGPWSAIIAGCVQ 397
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
N L+ D L F MR + + PN +H + F ++
Sbjct: 398 NELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDA 457
Query: 209 GTALVDMYAKCGCIEKSRALFESIS----GKDIWTWNVMICGLASHGLAKDALALFHKFL 264
T LV +Y+KCG +E + +F I KD+ W +I G HG +AL +F + +
Sbjct: 458 ATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV 517
Query: 265 SEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLV 324
G P +TF LNACS GLV EG F M++ Y HY C+VDLL RAG +
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRL 577
Query: 325 DEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIY 384
DEA +LI T+ EP +W LL AC H V +GE NKL +L+P + G+YV LA IY
Sbjct: 578 DEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIY 637
Query: 385 AKARKWEDVVRVRKLMIEKVSKKVAGWSLVELE 417
A +W+D+ +VR +M +K G S +E+
Sbjct: 638 AALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
++I+++ M+ P+ +T+ F A + + LG + VH +++ F RD +V+
Sbjct: 98 DAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG--LVVHGRILRSWFGRDKYVQ 155
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
NAL+ +Y + G++ A VFD M
Sbjct: 156 NALLAMY-----------------------------------MNFGKVEMARDVFDVMKN 180
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
RDV+SW+TMI GY +NG + D L F M + + + E GR V
Sbjct: 181 RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H +E + + V ALV+MY KCG ++++R +F+ + +D+ TW MI G G
Sbjct: 241 HKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDV 300
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK 292
++AL L EG P VT +++ C V++GK
Sbjct: 301 ENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 12/265 (4%)
Query: 97 EEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGL 156
EE L + N+++ ++ G + +A VFD M RDV++W+ MI GY ++G +E+ L
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 157 ECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMY 216
E +M+ +G+RPN G+ +H + + + T+L+ MY
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 217 AKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFV 276
AKC ++ +F S W+ +I G + L DAL LF + E P T
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 277 GVLNACSMGGLVSEGKRYFNLMVDCY----GIQPEMEHYGCMVDLLARAGLVDEAVHL-- 330
+L A + +++ ++ N + CY G ++ +V + ++ G ++ A +
Sbjct: 425 SLLPAYAA---LADLRQAMN--IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN 479
Query: 331 -IETMTVEPDPVLWATLLDACKVHG 354
I+ D VLW L+ +HG
Sbjct: 480 GIQEKHKSKDVVLWGALISGYGMHG 504
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 9/244 (3%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR--PNEXXXXX 176
G I A K+F+EMP+ ++S++ +I YV+ GL D + F M +G++ P+
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD 236
+ G VH I F V AL+ MY G +E +R +F+ + +D
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
+ +WN MI G +G DAL +F ++E + T V +L C + G+
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFV 356
L V+ + ++E +V++ + G +DEA + + M D + W C ++G+
Sbjct: 243 L-VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITW-----TCMINGYT 295
Query: 357 DMGE 360
+ G+
Sbjct: 296 EDGD 299
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N S+++ ++ M RR V+PN T L A A + L + +H ++ K GF
Sbjct: 398 NELVSDALGLFKRM--RREDVEPNIATLNSLLPAYA--ALADLRQAMNIHCYLTKTGFMS 453
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEE-EEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
+ L+H+Y +CG ++ES ++F +E DVV W ++++G +G+ +A +V
Sbjct: 454 SLDAATGLVHVYSKCG-TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQV 512
Query: 128 FDEMPERDV----VSWSTMIMGYVQNGLLEDGLECFSVMRE 164
F EM V +++++ + +GL+E+GL F M E
Sbjct: 513 FMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 179/362 (49%), Gaps = 38/362 (10%)
Query: 40 LHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEED 99
LH C K +S + G+ +H + +K G V N LI +Y + F++ E
Sbjct: 354 LHGCKK--SSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSK-----------FDDVET 400
Query: 100 TLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECF 159
L +F+++ E ++SW+++I G VQ+G E F
Sbjct: 401 VL------------------------FLFEQLQETPLISWNSVISGCVQSGRASTAFEVF 436
Query: 160 -SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAK 218
+M G+ P+ G+ +H F V TAL+DMYAK
Sbjct: 437 HQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAK 496
Query: 219 CGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGV 278
CG ++ ++F+SI TWN MI G + GL AL+ + + +G P +TF+GV
Sbjct: 497 CGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGV 556
Query: 279 LNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEP 338
L+AC+ GG V EGK F M+ +GI P ++HY MV LL RA L EA++LI M ++P
Sbjct: 557 LSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKP 616
Query: 339 DPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRK 398
D +W LL AC +H +++GE + K+ LD + G YV ++ +YA W+DVVRVR
Sbjct: 617 DSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRN 676
Query: 399 LM 400
+M
Sbjct: 677 MM 678
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 5 HAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKL 64
H + +S P I I+ +LR + PN T + L A T S QV H+ K
Sbjct: 25 HGEISSSP---ITIFRDLLRSS--LTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKS 79
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
G R V+V+ +L++LY ++ G + A
Sbjct: 80 GLDRFVYVKTSLLNLY-----------------------------------LKKGCVTSA 104
Query: 125 EKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXX 184
+ +FDEMPERD V W+ +I GY +NG D + F VM ++G P+
Sbjct: 105 QMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQC 164
Query: 185 XXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMI 244
GR VH + V AL+ Y+KC + + LF + K +WN MI
Sbjct: 165 GFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMI 224
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNA 281
+ GL ++A+ +F + VT + +L+A
Sbjct: 225 GAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 33/177 (18%)
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
V V T+L+++Y K GC+ ++ LF+ + +D WN +ICG + +G DA LF L
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGK---------------RYFNLMVDCYGIQPEME- 309
+GF P T V +L C G VS+G+ + N ++ Y E+
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 310 --------------HYGCMVDLLARAGLVDEAVHLIETM---TVEPDPVLWATLLDA 349
+ M+ +++GL +EA+ + + M VE PV LL A
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 37/141 (26%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
P+ T L C++ LG ++H + ++ F + FV ALI +Y +CG+ V+
Sbjct: 447 PDAITIASLLAGCSQLCCLNLGK--ELHGYTLRNNFENENFVCTALIDMYAKCGNEVQ-- 502
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
AE VF + +W++MI GY +G
Sbjct: 503 ---------------------------------AESVFKSIKAPCTATWNSMISGYSLSG 529
Query: 151 LLEDGLECFSVMREKGIRPNE 171
L L C+ MREKG++P+E
Sbjct: 530 LQHRALSCYLEMREKGLKPDE 550
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 191/366 (52%), Gaps = 7/366 (1%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
R++ NA+I Y + + ++ ++F+ + D +WN+++ G +RN E+ A +
Sbjct: 231 RNIISWNAMITGYAQ-NNRIDEADQLFQVMPE---RDFASWNTMITGFIRNREMNKACGL 286
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXX 186
FD MPE++V+SW+TMI GYV+N E+ L FS M R+ ++PN
Sbjct: 287 FDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG 346
Query: 187 XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFES--ISGKDIWTWNVMI 244
G+ +H I + V +AL++MY+K G + +R +F++ + +D+ +WN MI
Sbjct: 347 LVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 406
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGI 304
A HG K+A+ ++++ GF P VT++ +L ACS GLV +G +F +V +
Sbjct: 407 AVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESL 466
Query: 305 QPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGN 364
EHY C+VDL RAG + + + I + +L AC VH V + +++
Sbjct: 467 PLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVK 526
Query: 365 KLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFV 424
K+++ G YV ++ IYA K E+ +R M EK KK G S V++ H FV
Sbjct: 527 KVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFV 586
Query: 425 AGDKDH 430
GDK H
Sbjct: 587 VGDKSH 592
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
RDV +I Y + G E+ + +F+ + +VVTW ++++G +R+ ++ AE +
Sbjct: 75 RDVVTWTHVITGYIKLGDMREA-RELFDRVDSR--KNVVTWTAMVSGYLRSKQLSIAEML 131
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
F EMPER+VVSW+TMI GY Q+G ++ LE F M E+ I
Sbjct: 132 FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI---------VSWNSMVKALV 182
Query: 188 ECGRF--VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMIC 245
+ GR + E + R V TA+VD AK G ++++R LF+ + ++I +WN MI
Sbjct: 183 QRGRIDEAMNLFERMPRRDVVS-WTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMIT 241
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
G A + +A LF F N G + R N +
Sbjct: 242 GYAQNNRIDEADQLFQVMPERDFASWNTMITGFIR-----------NREMNKACGLFDRM 290
Query: 306 PEME--HYGCMVDLLARAGLVDEAVHLIETM----TVEPDPVLWATLLDACK-VHGFVDM 358
PE + M+ +EA+++ M +V+P+ + ++L AC + G V+
Sbjct: 291 PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE- 349
Query: 359 GEKI 362
G++I
Sbjct: 350 GQQI 353
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E++ ++S MLR VKPN T+ L AC+ A GL G Q+H + K +
Sbjct: 308 NKENEEALNVFSKMLRDGS-VKPNVGTYVSILSACSDLA--GLVEGQQIHQLISKSVHQK 364
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCS-DVVTWNSVLAGVVRNGEIRDAEKV 127
+ V +AL+++Y + G + + +++F + +C D+++WNS++A +G ++A ++
Sbjct: 365 NEIVTSALLNMYSKSGELIAA-RKMF--DNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421
Query: 128 FDEMPER----DVVSWSTMIMGYVQNGLLEDGLECF 159
+++M + V++ ++ GL+E G+E F
Sbjct: 422 YNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFF 457
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 30/193 (15%)
Query: 196 TIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKD 255
+I S R VP L+ K G I ++R LF+ + +D+ TW +I G G ++
Sbjct: 36 SIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMRE 95
Query: 256 ALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF-----------NLMVDCYGI 304
A LF + S + VT+ +++ +S + F N M+D Y
Sbjct: 96 ARELFDRVDSRKNV---VTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQ 152
Query: 305 Q-------------PEME--HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
PE + MV L + G +DEA++L E M D V W ++D
Sbjct: 153 SGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP-RRDVVSWTAMVDG 211
Query: 350 CKVHGFVDMGEKI 362
+G VD ++
Sbjct: 212 LAKNGKVDEARRL 224
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 179/367 (48%), Gaps = 37/367 (10%)
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNS 110
L G VH + VK GF D+ V+N +I Y + GS LC
Sbjct: 324 LSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS---------------LC-------- 360
Query: 111 VLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN 170
DA + F E+ +DV+S++++I G V N E+ F MR GIRP+
Sbjct: 361 ------------DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPD 408
Query: 171 EXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFE 230
G H + + + AL+DMY KCG ++ ++ +F+
Sbjct: 409 ITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFD 468
Query: 231 SISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSE 290
++ +DI +WN M+ G HGL K+AL+LF+ G P VT + +L+ACS GLV E
Sbjct: 469 TMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDE 528
Query: 291 GKRYFNLMVDC-YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
GK+ FN M + + P ++HY CM DLLARAG +DEA + M EPD + TLL A
Sbjct: 529 GKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSA 588
Query: 350 CKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVA 409
C + ++G ++ K+ L + V L+ Y+ A +WED R+R + ++ K
Sbjct: 589 CWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTP 647
Query: 410 GWSLVEL 416
G+S V++
Sbjct: 648 GYSWVDV 654
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 160/360 (44%), Gaps = 53/360 (14%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MIR +A +N +++ +Y ML V+P ++T+ F L AC A + G +H+H
Sbjct: 74 MIRAYA-SNDFAEKALDLYYKMLNSG--VRPTKYTYPFVLKACAGLRA--IDDGKLIHSH 128
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
V FA D++V AL+ Y +CG E
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCG-----------------------------------E 153
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE-KGIRPNEXXXXXXXX 179
+ A KVFDEMP+RD+V+W+ MI G+ + L D + F MR G+ PN
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
G+ VH + F + V T ++D+YAK CI +R +F+ K+ T
Sbjct: 214 ALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVT 273
Query: 240 WNVMICGLASHGLAKDALALFHKFL-SEGFIPVNVTFVG-VLNACSMGGLVSEGKRYFNL 297
W+ MI G + + K+A +F + L ++ V +G +L C+ G +S G+
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGR----- 328
Query: 298 MVDCYGIQP----EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
V CY ++ ++ ++ A+ G + +A + ++ D + + +L+ C V+
Sbjct: 329 CVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK-DVISYNSLITGCVVN 387
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 13/210 (6%)
Query: 119 GEIRDAEKVFDEMPERDV--VSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
E+ A VFDE+P + ++W MI Y N E L+ + M G+RP +
Sbjct: 49 NEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPF 108
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD 236
+ G+ +HS + F + V TALVD YAKCG +E + +F+ + +D
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD 168
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLS-EGFIPVNVTFVGVLNACSMGGLVSEGKRYF 295
+ WN MI G + H D + LF +G P T VG+ A G + EGK
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK--- 225
Query: 296 NLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
+ G DL+ + G++D
Sbjct: 226 -------AVHGYCTRMGFSNDLVVKTGILD 248
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 133/335 (39%), Gaps = 41/335 (12%)
Query: 23 LRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCE 82
+RR + PN T A + A L G VH + ++GF+ D+ V+ ++ +Y +
Sbjct: 195 MRRIDGLSPNLSTIVGMFPALGR--AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK 252
Query: 83 CGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTM 142
S + + A +VFD +++ V+WS M
Sbjct: 253 --------------------SKCIIY---------------ARRVFDLDFKKNEVTWSAM 277
Query: 143 IMGYVQNGLLEDGLECFSVM--REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESL 200
I GYV+N ++++ E F M + GR VH
Sbjct: 278 IGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 201 KFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALF 260
F + + V ++ YAK G + + F I KD+ ++N +I G + +++ LF
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 261 HKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLAR 320
H+ + G P T +GVL ACS + G V +G ++D+ +
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV-VHGYAVNTSICNALMDMYTK 456
Query: 321 AGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
G +D A + +TM + D V W T+L +HG
Sbjct: 457 CGKLDVAKRVFDTMH-KRDIVSWNTMLFGFGIHGL 490
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 190 GRFVHSTIESLKFRITVPVGTALVDM---YAKCGCIEKSRALFESISGKDI--WTWNVMI 244
G+ +H + LK +T+ T LV++ YA C +E +R +F+ I I W++MI
Sbjct: 18 GQVIHQHL--LKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMI 75
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGI 304
AS+ A+ AL L++K L+ G P T+ VL AC+ + +GK + V+C
Sbjct: 76 RAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK-LIHSHVNCSDF 134
Query: 305 QPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
+M +VD A+ G ++ A+ + + M + D V W ++ +H
Sbjct: 135 ATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISGFSLH 182
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N P ES ++ M R ++P+ T L AC+ AA LG G H + V G+A
Sbjct: 387 NCRPEESFRLFHEM--RTSGIRPDITTLLGVLTACSHLAA--LGHGSSCHGYCVVHGYAV 442
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+ + NAL+ +Y +CG ++ KRVF+ D+V+WN++L G +G ++A +F
Sbjct: 443 NTSICNALMDMYTKCG-KLDVAKRVFDTMHK---RDIVSWNTMLFGFGIHGLGKEALSLF 498
Query: 129 DEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVM 162
+ M E D V+ ++ +GL+++G + F+ M
Sbjct: 499 NSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM 536
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 198/424 (46%), Gaps = 57/424 (13%)
Query: 9 NSPPSESIAIYSAML----------------RRRRF--VKPNQHTFTFALHACTKRAASG 50
+S P S++ ++AML R+ +F +KP++ T + L +C +
Sbjct: 374 SSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCAR--LRF 431
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNS 110
L G Q+H V++ +++ + + LI +Y EC E+ E + C
Sbjct: 432 LEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC-----------EKMEISEC-------- 472
Query: 111 VLAGVVRNGEIRDAEKVFDE-MPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR- 168
+FD+ + E D+ W++MI G+ N L L F M + +
Sbjct: 473 ----------------IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLC 516
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
PNE GR H + + V TAL DMY KCG I+ +R
Sbjct: 517 PNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQF 576
Query: 229 FESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLV 288
F+++ K+ WN MI G +G +A+ L+ K +S G P +TFV VL ACS GLV
Sbjct: 577 FDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLV 636
Query: 289 SEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLD 348
G + M +GI+PE++HY C+VD L RAG +++A L E + VLW LL
Sbjct: 637 ETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696
Query: 349 ACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKV 408
+C+VHG V + ++ KL++LDP YV L+ Y+ R+W+D ++ LM + K
Sbjct: 697 SCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKT 756
Query: 409 AGWS 412
G S
Sbjct: 757 PGQS 760
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 162/365 (44%), Gaps = 36/365 (9%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
P++ T L AC+K G+ G++ H VK G +++FV NAL+ +Y +CG V+
Sbjct: 136 PSRFTLASVLSACSK-VLDGV-FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYG 193
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
RVFE + V++ +V+ G+ R ++ +A ++F M E+ V S + +
Sbjct: 194 VRVFESLSQP---NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 151 LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGT 210
+G + S + E G+ +H L F + +
Sbjct: 251 APREGCDSLSEI----------------------YGNELGKQIHCLALRLGFGGDLHLNN 288
Query: 211 ALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIP 270
+L+++YAK + + +F + ++ +WN+MI G + ++ + GF P
Sbjct: 289 SLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 271 VNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHL 330
VT + VL AC G V G+R F+ + QP + + M+ + +EA+
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 331 IETM---TVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQ-LAGIYAK 386
M ++PD + +L +C F++ G++I +I+ + + H V L +Y++
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE 463
Query: 387 ARKWE 391
K E
Sbjct: 464 CEKME 468
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 5/229 (2%)
Query: 53 SGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVL 112
SG +H +V++G D ++ N L+ LY ECG + ++VF+E DV +WN+ L
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDG-DYARKVFDEMS---VRDVYSWNAFL 79
Query: 113 AGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEX 172
+ G++ +A +VFD MPERDVVSW+ MI V+ G E L + M G P+
Sbjct: 80 TFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRF 139
Query: 173 XXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI-EKSRALFES 231
G H + VG AL+ MYAKCG I + +FES
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 232 ISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLN 280
+S + ++ +I GLA +A+ +F +G +V +L+
Sbjct: 200 LSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 170/416 (40%), Gaps = 78/416 (18%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWN---- 109
G Q+H ++LGF D+ + N+L+ +Y + + + +F E + +VV+WN
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAK-NKDMNGAELIFAEMPEV---NVVSWNIMIV 323
Query: 110 -------------------------------SVLAGVVRNGEIRDAEKVFDEMPERDVVS 138
SVL R+G++ ++F +P+ V +
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSA 383
Query: 139 WSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIE 198
W+ M+ GY E+ + F M+ + ++P++ E G+ +H +
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 199 SLKFRITVPVGTALVDMYAKCGCIEKSRALFES-ISGKDIWTWNVMICGLASHGLAKDAL 257
+ + + L+ +Y++C +E S +F+ I+ DI WN MI G + L AL
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKAL 503
Query: 258 ALFHKFLSEGFI-PVNVTFVGVLNACSMGGLVSEGKRYFNLMV---------------DC 301
LF + + P +F VL++CS + G+++ L+V D
Sbjct: 504 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 563
Query: 302 YGIQPEMEHYGCMVDLLARAGLV---------------DEAVHLIETMTV---EPDPVLW 343
Y E++ D + R V DEAV L M +PD + +
Sbjct: 564 YCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITF 623
Query: 344 ATLLDACKVHGFVDMGEKIGNKLIQ---LDPMHDGHYVQLAGIYAKARKWEDVVRV 396
++L AC G V+ G +I + + + ++P D HY+ + +A + ED ++
Sbjct: 624 VSVLTACSHSGLVETGLEILSSMQRIHGIEPELD-HYICIVDCLGRAGRLEDAEKL 678
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW--------- 240
G+ +H I + + + L+D+Y +CG + +R +F+ +S +D+++W
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 241 ----------------------NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGV 278
N MI L G + AL ++ + + +GF+P T V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 279 LNACS--MGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAG-LVDEAVHLIETMT 335
L+ACS + G+ G R + V G+ + ++ + A+ G +VD V + E+++
Sbjct: 145 LSACSKVLDGVF--GMRCHGVAVKT-GLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS 201
Query: 336 VEPDPVLWATLLDAC----KVHGFVDMGEKIGNKLIQLDPM 372
+P+ V + ++ KV V M + K +Q+D +
Sbjct: 202 -QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 208/421 (49%), Gaps = 43/421 (10%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
+++ ++S M R V ++HT T L A T + + +G +H VK G D+ V
Sbjct: 245 DALLVFSKM--REEGVGVSRHTITSVLSAFT--VSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM-- 131
NALI +Y + +E +FE ++ D+ TWNSVL G+ +F+ M
Sbjct: 301 NALIDMYGK-SKWLEEANSIFEAMDE---RDLFTWNSVLCVHDYCGDHDGTLALFERMLC 356
Query: 132 --PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
D+V+ +T++ + L G E M G+ +
Sbjct: 357 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRK----------------SS 400
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
F+H++ L+DMY KCG + +R +F+S+ KD +WN+MI G
Sbjct: 401 NEFIHNS---------------LMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGV 445
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
+ AL +F G P +TFVG+L ACS G ++EG+ + M Y I P +
Sbjct: 446 QSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSD 505
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
HY C++D+L RA ++EA L + + +PV+W ++L +C++HG D+ G +L +L
Sbjct: 506 HYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHEL 565
Query: 370 DPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKD 429
+P H G YV ++ +Y +A K+E+V+ VR M ++ KK G S + L+ G+H F G++
Sbjct: 566 EPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQT 625
Query: 430 H 430
H
Sbjct: 626 H 626
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 171/427 (40%), Gaps = 86/427 (20%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N P +++ Y M R + P+++TF L A L +VH KLGF
Sbjct: 139 NGSPLDAMETYREM--RANGILPDKYTFPSLLKGSD---AMELSDVKKVHGLAFKLGFDS 193
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D +V + L+ Y + S + DA+KVF
Sbjct: 194 DCYVGSGLVTSYSKFMS-----------------------------------VEDAQKVF 218
Query: 129 DEMPERD-VVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
DE+P+RD V W+ ++ GY Q ED L FS MRE+G+ +
Sbjct: 219 DELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDI 278
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
+ GR +H + V AL+DMY K +E++ ++FE++ +D++TWN ++C
Sbjct: 279 DNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVH 338
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
G LALF + L G P VT VL C + +G+ M+ + +
Sbjct: 339 DYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRK 398
Query: 308 MEH---YGCMVDLLARAGLVDEAVHLIETMT----------------------------- 335
+ + ++D+ + G + +A + ++M
Sbjct: 399 SSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSC 458
Query: 336 -----VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD-----GHYVQLAGIYA 385
V+PD + + LL AC GF++ G N L Q++ +++ HY + +
Sbjct: 459 MCRAGVKPDEITFVGLLQACSHSGFLNEGR---NFLAQMETVYNILPTSDHYACVIDMLG 515
Query: 386 KARKWED 392
+A K E+
Sbjct: 516 RADKLEE 522
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 144/356 (40%), Gaps = 51/356 (14%)
Query: 8 ANSPPSESIAIYSAMLRR-----RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVV 62
A P S ++YS + + +R+ N T L C +R SG Q+H +V
Sbjct: 30 AIKPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQR--KDYVSGQQIHGFMV 87
Query: 63 KLGFARDV-FVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEI 121
+ GF D +L+++Y +CG +
Sbjct: 88 RKGFLDDSPRAGTSLVNMYAKCGL-----------------------------------M 112
Query: 122 RDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXX 181
R A VF ERDV ++ +I G+V NG D +E + MR GI P++
Sbjct: 113 RRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGS 171
Query: 182 XXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT-W 240
+ + VH L F VG+ LV Y+K +E ++ +F+ + +D W
Sbjct: 172 DAMELSDVKK-VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLW 230
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N ++ G + +DAL +F K EG T VL+A ++ G + G+ L V
Sbjct: 231 NALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVK 290
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL---DACKVH 353
G ++ ++D+ ++ ++EA + E M E D W ++L D C H
Sbjct: 291 T-GSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVLCVHDYCGDH 344
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 207/398 (52%), Gaps = 12/398 (3%)
Query: 22 MLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYC 81
++R+ +PN TF A+ AC + L G Q+H V+K F + V ALI +Y
Sbjct: 220 LMRKFSSEEPNDVTFVNAITACA--SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYS 277
Query: 82 ECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVV 137
+C +S VF E +DT ++++WNSV++G++ NG+ A ++F+++ D
Sbjct: 278 KC-RCWKSAYIVFTELKDT--RNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSA 334
Query: 138 SWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTI 197
+W+++I G+ Q G + + + F M + P+ + G+ +H +
Sbjct: 335 TWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHV 394
Query: 198 ESLKFRITVPVGTALVDMYAKCGCIEKSRALFESI--SGKDIWTWNVMICGLASHGLAKD 255
+ V T+L+DMY KCG +R +F+ KD WNVMI G HG +
Sbjct: 395 IKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECES 454
Query: 256 ALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMV 315
A+ +F E P TF VL+ACS G V +G + F LM + YG +P EH GCM+
Sbjct: 455 AIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMI 514
Query: 316 DLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG 375
DLL R+G + EA +I+ M+ V ++LL +C+ H +GE+ KL +L+P +
Sbjct: 515 DLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPA 573
Query: 376 HYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSL 413
+V L+ IYA +WEDV +R+++ +K K+ G SL
Sbjct: 574 PFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 145/372 (38%), Gaps = 90/372 (24%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQ---VHAHVVKLGFARDVFVRNALIHLYCECGSSV 87
PN+ TF L +C K LG VQ +HA VVK GF DVF AL+ +Y
Sbjct: 29 PNKFTFPPLLKSCAK-----LGDVVQGRILHAQVVKTGFFVDVFTATALVSMY------- 76
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYV 147
++ ++ DA KV DEMPER + S + + G +
Sbjct: 77 ----------------------------MKVKQVTDALKVLDEMPERGIASVNAAVSGLL 108
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
+NG D F R G N E G +H F + V
Sbjct: 109 ENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI---EGGMQLHCLAMKSGFEMEVY 165
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG---LAKDALALFHKFL 264
VGT+LV MY++CG + +FE + K + T+N I GL +G L L KF
Sbjct: 166 VGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFS 225
Query: 265 SEGFIPVNVTFVGVLNACS----------MGGLVSEGKRYFNLMV--------------- 299
SE P +VTFV + AC+ + GLV + + F MV
Sbjct: 226 SEE--PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWK 283
Query: 300 DCYGIQPEME------HYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDAC 350
Y + E++ + ++ + G + AV L E + E PD W +L
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSL---- 339
Query: 351 KVHGFVDMGEKI 362
+ GF +G+ I
Sbjct: 340 -ISGFSQLGKVI 350
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 184/355 (51%), Gaps = 10/355 (2%)
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
+D+ V NA+I Y + E+ V + + + DV+TWN++++G +R+ EKV
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGF---SHMRNEEKV 237
Query: 128 FDEMP-------ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+ + + DVVSW+++I G V N E + F M G+ PN
Sbjct: 238 SEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
+ G+ +H V +AL+DMY KCG I ++ LF K T+
Sbjct: 298 CTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTF 357
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N MI A+HGLA A+ LF + + G ++TF +L ACS GL G+ F LM +
Sbjct: 358 NSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQN 417
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
Y I P +EHY CMVDLL RAG + EA +I+ M +EPD +W LL AC+ HG +++
Sbjct: 418 KYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELAR 477
Query: 361 KIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVE 415
L +L+P + G+ + L +YA A WE VVR++K++ +K ++ G S VE
Sbjct: 478 IAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 131/313 (41%), Gaps = 41/313 (13%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G +HAH+V G AR + L+ Y ECG
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECG----------------------------- 65
Query: 114 GVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
++ DA KVFDEMP+RD+ MI +NG ++ L+ F M + G++ +
Sbjct: 66 ------KVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFI 119
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS 233
E G+ +H + + + ++L+DMY+K G + +R +F +
Sbjct: 120 VPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR 293
+D+ +N MI G A++ A +AL L G P +T+ +++ S + +E K
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFS--HMRNEEKV 237
Query: 294 YFNLMVDCY-GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDA 349
L + C G +P++ + ++ L ++A + M P+ TLL A
Sbjct: 238 SEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
Query: 350 CKVHGFVDMGEKI 362
C ++ G++I
Sbjct: 298 CTTLAYMKHGKEI 310
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 194/417 (46%), Gaps = 45/417 (10%)
Query: 21 AMLRRRRFVK-----PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNA 75
AML RR ++ P+++TF+ A+ A + G +H V KLG+ R VFV
Sbjct: 385 AMLMYRRLLRMSTPRPDEYTFSAAISATAE--PERFVHGKLLHGQVTKLGYERSVFVGTT 442
Query: 76 LIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERD 135
L+ +Y +N E A+KVFD M ERD
Sbjct: 443 LLSMY-----------------------------------FKNREAESAQKVFDVMKERD 467
Query: 136 VVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHS 195
VV W+ MI+G+ + G E ++ F M + R + G H
Sbjct: 468 VVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHC 527
Query: 196 TIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKD 255
F + V ALVDMY K G E + +F S D+ WN M+ + HG+ +
Sbjct: 528 LAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEK 587
Query: 256 ALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMV 315
AL+ F + L GF+P VT++ +L ACS G +GK +N M + GI+ +HY CMV
Sbjct: 588 ALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMV 646
Query: 316 DLLARAGLVDEAVHLIETMTVEPDPV-LWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD 374
+L+++AGLVDEA+ LIE + LW TLL AC + +G ++++LDP
Sbjct: 647 NLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDT 706
Query: 375 GHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVEL-EGGIHHFVAGDKDH 430
++ L+ +YA +WEDV +R+ + S K G S +E+ F +GD+ +
Sbjct: 707 ATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSN 763
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 154/348 (44%), Gaps = 17/348 (4%)
Query: 54 GVQVHAHVVKLGFARDVF------VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDV-- 105
G +H+ ++KLG + +F + ++++ L +C S+ KR + L +
Sbjct: 69 GSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKC-VSITVLKRARQIHALVLTAGAGA 127
Query: 106 -----VTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN-GLLEDGLECF 159
N++++ VR G + A KVFD+MP R+VVS++ + Y +N
Sbjct: 128 ATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLT 187
Query: 160 SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKC 219
+ M + ++PN G ++S I L + V V T+++ MY+ C
Sbjct: 188 THMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSC 247
Query: 220 GCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVL 279
G +E +R +F+ ++ +D WN MI G + +D L F L G P T+ VL
Sbjct: 248 GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL 307
Query: 280 NACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPD 339
N CS G S GK ++ + ++ ++D+ G + EA ++ + P+
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVSDSL-ADLPLDNALLDMYCSCGDMREAFYVFGRIH-NPN 365
Query: 340 PVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKA 387
V W +++ C +GF + + +L+++ Y A I A A
Sbjct: 366 LVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 146/348 (41%), Gaps = 40/348 (11%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V P Q T++ L+ C+K + LG +HA ++ D+ + NAL+ +YC CG
Sbjct: 296 VDPTQFTYSIVLNGCSKLGSYSLGK--LIHARIIVSDSLADLPLDNALLDMYCSCG---- 349
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
++R+A VF + ++VSW+++I G +
Sbjct: 350 -------------------------------DMREAFYVFGRIHNPNLVSWNSIISGCSE 378
Query: 149 NGLLEDGLECFS-VMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
NG E + + ++R RP+E G+ +H + L + +V
Sbjct: 379 NGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVF 438
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
VGT L+ MY K E ++ +F+ + +D+ W MI G + G ++ A+ F + E
Sbjct: 439 VGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREK 498
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
+ V+ ACS ++ +G+ + L + G M G +VD+ + G E
Sbjct: 499 NRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRT-GFDCVMSVCGALVDMYGKNGKY-ET 556
Query: 328 VHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG 375
I ++ PD W ++L A HG V+ ++++ M D
Sbjct: 557 AETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDA 604
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 37/237 (15%)
Query: 28 FVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSV 87
+VKPN TFT + C +GS +++ ++KLG++ +V V+ +++ +Y CG +
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSS--LNSQIIKLGYSDNVVVQTSVLGMYSSCG-DL 250
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYV 147
ES +R+F+ + D V WN+++ G ++N +I
Sbjct: 251 ESARRIFDCVNN---RDAVAWNTMIVGSLKNDKI-------------------------- 281
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
EDGL F M G+ P + G+ +H+ I +P
Sbjct: 282 -----EDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP 336
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL 264
+ AL+DMY CG + ++ +F I ++ +WN +I G + +G + A+ ++ + L
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLL 393
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 170/320 (53%), Gaps = 7/320 (2%)
Query: 98 EDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLE 157
ED + W+ +++G R G++ +A +F + RD+V W+T+I GY QNG +D ++
Sbjct: 201 EDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAID 260
Query: 158 CFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYA 217
F M+ +G P+ + GR VHS I + V AL+DMYA
Sbjct: 261 AFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320
Query: 218 KCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVG 277
KCG +E + ++FESIS + + N MI LA HG K+AL +F S P +TF+
Sbjct: 321 KCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIA 380
Query: 278 VLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE 337
VL AC GG + EG + F+ M ++P ++H+GC++ LL R+G + EA L++ M V+
Sbjct: 381 VLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Query: 338 PDPVLWATLLDACKVHGFVDMGEKIGNKLIQ-----LDPMHDGHYVQLAGIYAKARKWED 392
P+ + LL ACKVH +M E++ K+I+ + + H ++ +YA +W+
Sbjct: 440 PNDTVLGALLGACKVHMDTEMAEQV-MKIIETAGSITNSYSENHLASISNLYAHTERWQT 498
Query: 393 VVRVRKLMIEKVSKKVAGWS 412
+R M ++ +K G S
Sbjct: 499 AEALRVEMEKRGLEKSPGLS 518
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 219/497 (44%), Gaps = 62/497 (12%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I+ H SP +++ +Y +RRR P AC + G +H+
Sbjct: 17 LIKNHISRGSPI-QALVLYGG-IRRRGVYFPGWVPLILRACACV---VPRVVLGKLLHSE 71
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+K G DV V ++LI +Y +CG V S ++VF+E + +V TWN+++ G + NG+
Sbjct: 72 SIKFGVCSDVMVGSSLISMYGKCGCVV-SARKVFDEMPE---RNVATWNAMIGGYMSNGD 127
Query: 121 IRDAEKVFDEMPE-RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
A +F+E+ R+ V+W MI GY + +E E F M + ++ +
Sbjct: 128 AVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE-LKNVKAWSVMLGV 186
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
+ +F E F V + ++ Y + G + ++RA+F + +D+
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAF-----VWSLMMSGYFRIGDVHEARAIFYRVFARDLVI 241
Query: 240 WNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV 299
WN +I G A +G + DA+ F EG+ P VT +L+AC+ G + G+ +L +
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL-I 300
Query: 300 DCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTV----------------------- 336
+ GI+ ++D+ A+ G ++ A + E+++V
Sbjct: 301 NHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEAL 360
Query: 337 -----------EPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD-GHYVQLAGIY 384
+PD + + +L AC GF+ G KI +++ D + H+ L +
Sbjct: 361 EMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLL 420
Query: 385 AKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIG 444
++ K ++ R+ K M K + V G L + +H D + + + +++ET G
Sbjct: 421 GRSGKLKEAYRLVKEMHVKPNDTVLGALLGACK--VH------MDTEMAEQVMKIIETAG 472
Query: 445 QGITAAGYPSVHLTCVA 461
IT + Y HL ++
Sbjct: 473 S-ITNS-YSENHLASIS 487
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 222/494 (44%), Gaps = 98/494 (19%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ +Y M + P+ H T L AC K + G +HA +K G V+V+
Sbjct: 87 ETVDVYIDM--HNSGIPPSSHAVTSVLRACGK--MENMVDGKPIHAQALKNGLCGCVYVQ 142
Query: 74 -------------------------------NALIHLYCECGSSVESFKRVFEE--EEDT 100
N+L+H Y E G E+ +RVF++ E+D
Sbjct: 143 TGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA-RRVFDKIPEKDA 201
Query: 101 LCSDVV--------------------------TWNSVLAGVVRNGEIRDAEKVFDEMPER 134
+ +++ +WN ++ G V E++ A FD MP++
Sbjct: 202 VSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQK 261
Query: 135 DVVSWSTMIMGYV-------------------------------QNGLLEDGLECFSVMR 163
+ VSW TMI GY QNG +D L+ F+ M
Sbjct: 262 NGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQML 321
Query: 164 EKG--IRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGC 221
E+ I+P+E G +V S I +I + T+L+D+Y K G
Sbjct: 322 ERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGD 381
Query: 222 IEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNA 281
K+ +F +++ KD +++ MI G +G+A +A +LF + + P VTF G+L+A
Sbjct: 382 FAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSA 441
Query: 282 CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPV 341
S GLV EG + FN M D + ++P +HYG MVD+L RAG ++EA LI++M ++P+
Sbjct: 442 YSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAG 500
Query: 342 LWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMI 401
+W LL A +H V+ GE + ++L+ G+ LA IY+ +W+D VR +
Sbjct: 501 VWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIK 560
Query: 402 EKVSKKVAGWSLVE 415
EK K G S VE
Sbjct: 561 EKKLCKTLGCSWVE 574
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 172/352 (48%), Gaps = 38/352 (10%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V P+ T L C S G V+ ++K GF + V +ALI+++ +C
Sbjct: 498 VCPDSRTMVGMLQTCA--FCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKC----- 550
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP-ERDVVSWSTMIMGYV 147
D L + +V +FD+ E+ VSW+ M+ GY+
Sbjct: 551 ----------DALAAAIV--------------------LFDKCGFEKSTVSWNIMMNGYL 580
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
+G E+ + F M+ + +PN G VHS++ F P
Sbjct: 581 LHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTP 640
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
VG +LVDMYAKCG IE S F IS K I +WN M+ A+HGLA A++LF
Sbjct: 641 VGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENE 700
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
P +V+F+ VL+AC GLV EGKR F M + + I+ E+EHY CMVDLL +AGL EA
Sbjct: 701 LKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEA 760
Query: 328 VHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQ 379
V ++ M V+ +W LL++ ++H + + +L++L+P++ HY Q
Sbjct: 761 VEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQ 812
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 172/434 (39%), Gaps = 77/434 (17%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+I+++ M+R +KPN T T L C AAS LG +H + +K ++
Sbjct: 384 EAISLFRDMMRIH--IKPNAVTLTSVLQGCAGVAASRLGKS--IHCYAIKADIESELETA 439
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
A+I +Y +C G A K F+ +P
Sbjct: 440 TAVISMYAKC-----------------------------------GRFSPALKAFERLPI 464
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+D V+++ + GY Q G + + M+ G+ P+ G V
Sbjct: 465 KDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCV 524
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS-GKDIWTWNVMICGLASHGL 252
+ I F V AL++M+ KC + + LF+ K +WN+M+ G HG
Sbjct: 525 YGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ 584
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
A++A+A F + E F P VTFV ++ A + + G + ++ C G +
Sbjct: 585 AEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQC-GFCSQTPVGN 643
Query: 313 CMVDLLARAGLVDE-------------------------------AVHLIETMT---VEP 338
+VD+ A+ G+++ AV L +M ++P
Sbjct: 644 SLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKP 703
Query: 339 DPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD--GHYVQLAGIYAKARKWEDVVRV 396
D V + ++L AC+ G V+ G++I ++ + + HY + + KA + + V +
Sbjct: 704 DSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEM 763
Query: 397 RKLMIEKVSKKVAG 410
+ M K S V G
Sbjct: 764 MRRMRVKTSVGVWG 777
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 117/304 (38%), Gaps = 36/304 (11%)
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNS 110
L G+ +H + V+ G DV V +L+ +Y +CG
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG-------------------------- 349
Query: 111 VLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPN 170
E+ AE++F + +RDVVSWS MI Y Q G ++ + F M I+PN
Sbjct: 350 ---------ELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPN 400
Query: 171 EXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFE 230
G+ +H + TA++ MYAKCG + FE
Sbjct: 401 AVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFE 460
Query: 231 SISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSE 290
+ KD +N + G G A A ++ G P + T VG+L C+ +
Sbjct: 461 RLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYAR 520
Query: 291 GKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDAC 350
G + ++ +G E ++++ + + A+ L + E V W +++
Sbjct: 521 GSCVYGQIIK-HGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGY 579
Query: 351 KVHG 354
+HG
Sbjct: 580 LLHG 583
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 15/246 (6%)
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
++ AE VF+E+ +D SW TM+ Y NG E+ LE F +MR +R N+
Sbjct: 248 ADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASAL 307
Query: 179 XXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIW 238
G +H V V T+L+ MY+KCG +E + LF +I +D+
Sbjct: 308 QAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVV 367
Query: 239 TWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
+W+ MI G +A++LF + P VT VL C+ GK
Sbjct: 368 SWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS----- 422
Query: 299 VDCYG----IQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
+ CY I+ E+E ++ + A+ G A+ E + ++ D V + L G
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNAL-----AQG 476
Query: 355 FVDMGE 360
+ +G+
Sbjct: 477 YTQIGD 482
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 41/260 (15%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
MIR + +A E++ + M + + P++++FTFAL AC + G+++H
Sbjct: 70 MIRGYTRAG-LHREALGFFGYM-SEEKGIDPDKYSFTFALKACA--GSMDFKKGLRIHDL 125
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+ ++G DV++ AL+ +YC+ D+V+
Sbjct: 126 IAEMGLESDVYIGTALVEMYCKA-------------------RDLVS------------- 153
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
A +VFD+M +DVV+W+TM+ G QNG L F MR + +
Sbjct: 154 ---ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
+ R +H + +K + L+DMY C + + ++FE + KD +W
Sbjct: 211 VSKLEKSDVCRCLHGLV--IKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSW 268
Query: 241 NVMICGLASHGLAKDALALF 260
M+ A +G ++ L LF
Sbjct: 269 GTMMAAYAHNGFFEEVLELF 288
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXX 185
+FD + + VV W++MI GY + GL + L F M EKGI P++
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 186 XXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMIC 245
+ G +H I + V +GTALV+MY K + +R +F+ + KD+ TWN M+
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 246 GLASHGLAKDALALFHKFLS 265
GLA +G + AL LFH S
Sbjct: 175 GLAQNGCSSAALLLFHDMRS 194
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 2/346 (0%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
N+++ + ++R A VF + E + +W+++I GY Q E+ M G +
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLK-FRITVPVGTALVDMYAKCGCIEKSRA 227
PN + G+ H I K F+ + +LVD+YAK G I ++
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 228 LFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGL 287
+ + +S +D T+ +I G + G ALALF + G P +VT V VL+ACS L
Sbjct: 439 VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKL 498
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
V EG+R F M YGI+P ++H+ CMVDL RAG + +A +I M +P WATLL
Sbjct: 499 VHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLL 558
Query: 348 DACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKK 407
+AC +HG +G+ KL+++ P + G+YV +A +YA A W + VR +M + KK
Sbjct: 559 NACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKK 618
Query: 408 VAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGIT-AAGY 452
G + ++ + G F GD + + Y +L+ + Q + AGY
Sbjct: 619 DPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGY 664
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 154/367 (41%), Gaps = 25/367 (6%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I +AK N E IA Y M+ + ++P+ T+ L AC + G VH
Sbjct: 115 LIASYAK-NELFEEVIAAYKRMVSKG--IRPDAFTYPSVLKACGETLDVAFGR--VVHGS 169
Query: 61 VVKLGFARDVFVRNALIHLYC---ECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVR 117
+ + ++V NALI +Y G + F R+FE D V+WN+V+
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFER-------DAVSWNAVINCYAS 222
Query: 118 NGEIRDAEKVFDEM----PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXX 173
G +A ++FD+M E V++W+ + G +Q G L S MR +
Sbjct: 223 EGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVA 282
Query: 174 XXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS 233
G+ +H + V L+ MY+KC + + +F
Sbjct: 283 MIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE 342
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR 293
+ TWN +I G A +++A L + L GF P ++T +L C+ + GK
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE 402
Query: 294 YFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
+ ++ + + +VD+ A++G + A + + M+ + D V + +L+D
Sbjct: 403 FHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLID----- 456
Query: 354 GFVDMGE 360
G+ + GE
Sbjct: 457 GYGNQGE 463
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 155/440 (35%), Gaps = 107/440 (24%)
Query: 34 HTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRV 93
H+ L AC A +GVQVHAH + G
Sbjct: 44 HSAASLLSACVDVRA--FLAGVQVHAHCISSGV--------------------------- 74
Query: 94 FEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLE 153
E L +VT+ S I + + +P W+ +I Y +N L E
Sbjct: 75 --EYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLP------WNVLIASYAKNELFE 126
Query: 154 DGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALV 213
+ + + M KGIRP+ GR VH +IE ++ ++ V AL+
Sbjct: 127 EVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALI 186
Query: 214 DMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG----FI 269
MY + + +R LF+ + +D +WN +I AS G+ +A LF K G I
Sbjct: 187 SMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVI 246
Query: 270 PVNV---------TFVGV----------------------LNACSMGGLVSEGKRYF--- 295
N+ +VG L ACS+ G + GK
Sbjct: 247 TWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLA 306
Query: 296 ------------NLMVDCYGIQPEMEH---------------YGCMVDLLARAGLVDEAV 328
N ++ Y ++ H + ++ A+ +EA
Sbjct: 307 IHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEAS 366
Query: 329 HLIETMTV---EPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYV--QLAGI 383
HL+ M V +P+ + A++L C + G++ +++ D + L +
Sbjct: 367 HLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDV 426
Query: 384 YAKARKWEDVVRVRKLMIEK 403
YAK+ K +V LM ++
Sbjct: 427 YAKSGKIVAAKQVSDLMSKR 446
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 212/424 (50%), Gaps = 38/424 (8%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR-DVFVRNALIHLYCECG 84
R V PN+ +FT AL AC + S LG+ + H+ +VKLG + +V V N LI +Y +CG
Sbjct: 149 RSDVFPNEFSFTAALAACARLHLSPLGACI--HSKLVKLGLEKGNVVVGNCLIDMYGKCG 206
Query: 85 ---SSVESFKRVFEEEEDTL--------CS------------------DVVTWNSVLAGV 115
+V F+ + EE+DT+ CS D VT+N ++
Sbjct: 207 FMDDAVLVFQHM--EEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAF 264
Query: 116 VRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXX 175
V++G+ +A +V +MP + SW+T++ GYV + + E F+ M G+R +E
Sbjct: 265 VKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLS 324
Query: 176 XXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK 235
G +H+ L V V +AL+DMY+KCG ++ + +F ++ K
Sbjct: 325 IVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRK 384
Query: 236 DIWTWNVMICGLASHGLAKDALALFHKFLSEGFI-PVNVTFVGVLNACSMGGLVSEGKR- 293
++ WN MI G A +G + +A+ LF++ E F+ P TF+ +L CS + E
Sbjct: 385 NLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLG 444
Query: 294 YFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
YF +M++ Y I+P +EH ++ + + G V +A +I+ D V W LL AC
Sbjct: 445 YFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSAR 504
Query: 354 GFVDMGEKIGNKLIQL-DPMHDGH-YVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGW 411
+ + + K+I+L D D + Y+ ++ +YA +W +V ++RK+M E K G
Sbjct: 505 KDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGS 564
Query: 412 SLVE 415
S ++
Sbjct: 565 SWID 568
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 56 QVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGV 115
Q+H +V K GF + + N+L+ Y + D+L
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFY---------------KTSDSL-------------- 106
Query: 116 VRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXX 175
DA KVFDEMP+ DV+SW++++ GYVQ+G ++G+ F + + PNE
Sbjct: 107 ------EDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFT 160
Query: 176 XXXXXXXXXXXXECGRFVHSTIESLKF-RITVPVGTALVDMYAKCGCIEKSRALFESISG 234
G +HS + L + V VG L+DMY KCG ++ + +F+ +
Sbjct: 161 AALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEE 220
Query: 235 KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGG 286
KD +WN ++ + +G + L FH+ + P VT+ +++A G
Sbjct: 221 KDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSG 268
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 180/346 (52%), Gaps = 10/346 (2%)
Query: 103 SDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM 162
S+ V +S++ + DA V D M +DVVS STMI G G ++ + F M
Sbjct: 361 SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM 420
Query: 163 REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT-VPVGTALVDMYAKCGC 221
R+ PN ++ H I + VGT++VD YAKCG
Sbjct: 421 RDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGA 477
Query: 222 IEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNA 281
IE +R F+ I+ K+I +W V+I A +GL ALALF + +G+ P VT++ L+A
Sbjct: 478 IEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSA 537
Query: 282 CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT--VEPD 339
C+ GGLV +G F MV+ +P ++HY C+VD+L+RAG +D AV LI+ + V+
Sbjct: 538 CNHGGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAG 596
Query: 340 PVLWATLLDAC--KVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVR 397
W +L C + + E + ++++L+P+ Y+ + +A + WEDV +R
Sbjct: 597 ASAWGAILSGCRNRFKKLIITSEVVA-EVLELEPLCSSGYLLASSTFAAEKSWEDVAMMR 655
Query: 398 KLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLETI 443
+L+ E+ + VAG+S+V F+AGDK S++ +++++
Sbjct: 656 RLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 186/459 (40%), Gaps = 79/459 (17%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+IR + ++ P + ++ M+ + +P+ T T L ACT + G VH
Sbjct: 196 VIRSYVQSKEPVV-GLKLFKEMVHEAK-TEPDCVTVTSVLKACT--VMEDIDVGRSVHGF 251
Query: 61 VVKLGF-ARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNG 119
++ GF DVFV N+LI +Y + G V+S
Sbjct: 252 SIRRGFDLADVFVCNSLIDMYSK-GFDVDS------------------------------ 280
Query: 120 EIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
A +VFDE R++VSW++++ G+V N ++ LE F +M ++ + +E
Sbjct: 281 ----AFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLR 336
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWT 239
+ +H I + ++L+D Y C ++ + + +S++ KD+ +
Sbjct: 337 VCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS 396
Query: 240 WNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL-- 297
+ MI GLA G + +A+++F P +T + +LNACS+ + K +
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAI 453
Query: 298 --------------MVDCYG---------------IQPEMEHYGCMVDLLARAGLVDEAV 328
+VD Y + + + ++ A GL D+A+
Sbjct: 454 RRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKAL 513
Query: 329 HLIETMTVE---PDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD-GHYVQLAGIY 384
L + M + P+ V + L AC G V G I +++ D HY + +
Sbjct: 514 ALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDML 573
Query: 385 AKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHF 423
++A + + V + K + E V + W + L G + F
Sbjct: 574 SRAGEIDTAVELIKNLPEDVKAGASAWGAI-LSGCRNRF 611
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 5/240 (2%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
NS+ ++ G++ + FD M RD VSW+ ++ G + G E+GL FS +R G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
PN G +H + F V +++ MYA + +R L
Sbjct: 125 PNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKL 181
Query: 229 FESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI-PVNVTFVGVLNACSMGGL 287
F+ +S +D+ +W+V+I L LF + + E P VT VL AC++
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
+ G+ + ++ ++D+ ++ VD A + + T + V W ++L
Sbjct: 242 IDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWNSIL 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 96/247 (38%), Gaps = 37/247 (14%)
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
G ++ D Y KCG + F+ ++ +D +WNV++ GL +G ++ L F K GF
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMV---DLLARAGLVD 325
P T V V++AC E + + GI CM D L+ L D
Sbjct: 124 EPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFD 183
Query: 326 E------------------------AVHLIETMT----VEPDPVLWATLLDACKVHGFVD 357
E + L + M EPD V ++L AC V +D
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDID 243
Query: 358 MGEKIGNKLIQLDPMHDGHYV--QLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVE 415
+G + I+ +V L +Y+K DV ++ E + + W+ +
Sbjct: 244 VGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGF---DVDSAFRVFDETTCRNIVSWNSI- 299
Query: 416 LEGGIHH 422
L G +H+
Sbjct: 300 LAGFVHN 306
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 193/412 (46%), Gaps = 44/412 (10%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
AN+ S +++ ML + KP+ TF L A L ++H +KLGF
Sbjct: 191 ANACADTSFSLFQLMLTEGK--KPDCFTFGSLLRASI--VVKCLEIVSELHGLAIKLGFG 246
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
R + +L++ Y +CGS + +A K+
Sbjct: 247 RSSALIRSLVNAYVKCGS-----------------------------------LANAWKL 271
Query: 128 FDEMPERDVVSWSTMIMGYVQ-NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
+ +RD++S + +I G+ Q N D + F M + +E
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 187 XECGRFVHS-TIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMIC 245
GR +H ++S + R V +G +L+DMYAK G IE + FE + KD+ +W +I
Sbjct: 332 VTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIA 391
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
G HG + A+ L+++ E P +VTF+ +L+ACS G G + ++ M++ +GI+
Sbjct: 392 GYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIE 451
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETM--TVEPDPVLWATLLDACKVHGFVDMGEKIG 363
EH C++D+LAR+G ++EA LI + V W LDAC+ HG V + +
Sbjct: 452 AREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAA 511
Query: 364 NKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVS-KKVAGWSLV 414
+L+ ++P +Y+ LA +YA W++ + RKLM E S K G+SLV
Sbjct: 512 TQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 137/342 (40%), Gaps = 39/342 (11%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
R VK NQ T+ L +C + L G+Q+H V K A ++ VR+AL+ LY CG
Sbjct: 106 REDVKANQFTYGSVLKSC--KDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCG- 162
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
++ +A FD M ERD+VSW+ MI G
Sbjct: 163 ----------------------------------KMEEARLQFDSMKERDLVSWNAMIDG 188
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
Y N + F +M +G +P+ E +H L F +
Sbjct: 189 YTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 248
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA-SHGLAKDALALFHKFL 264
+ +LV+ Y KCG + + L E +D+ + +I G + + DA +F +
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 265 SEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLV 324
V +L C+ V+ G++ + I+ ++ ++D+ A++G +
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEI 368
Query: 325 DEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKL 366
++AV E M E D W +L+ HG + + N++
Sbjct: 369 EDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFEKAIDLYNRM 409
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%)
Query: 101 LCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFS 160
CS++ + ++ ++ G+++ A K+FD + +RDVVSW+ MI + + G D L F
Sbjct: 43 FCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFK 102
Query: 161 VMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCG 220
M + ++ N+ + G +H ++E + V +AL+ +YA+CG
Sbjct: 103 EMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCG 162
Query: 221 CIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLN 280
+E++R F+S+ +D+ +WN MI G ++ A + +LF L+EG P TF +L
Sbjct: 163 KMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLR 222
Query: 281 A 281
A
Sbjct: 223 A 223
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHG 251
+H + F + + L+D+Y K G ++ +R LF+ IS +D+ +W MI + G
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
DAL LF + E T+ VL +C G + EG + I +E
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ----------IHGSVEKG 142
Query: 312 GC---------MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
C ++ L AR G ++EA ++M E D V W ++D + D
Sbjct: 143 NCAGNLIVRSALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDGYTANACAD 196
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 196/419 (46%), Gaps = 44/419 (10%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGV--QVHAHVVKLG 65
AN + ++ AM +R ++PN+ T L AC + GS + ++H + G
Sbjct: 228 ANQNYEMGVDLFRAM--QRENLRPNRVTLLSVLPACVEL---NYGSSLVKEIHGFSFRHG 282
Query: 66 FARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAE 125
D + A + +YC CG+ S RV
Sbjct: 283 CHADERLTAAFMTMYCRCGNV--SLSRV-------------------------------- 308
Query: 126 KVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXX 185
+F+ RDVV WS+MI GY + G + + + MR++GI N
Sbjct: 309 -LFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNST 367
Query: 186 XXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMIC 245
VHS I F + +G AL+DMYAKCG + +R +F ++ KD+ +W+ MI
Sbjct: 368 LLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMIN 427
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
HG +AL +F + G ++ F+ +L+AC+ GLV E + F Y +
Sbjct: 428 AYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGKYHMP 486
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDM-GEKIGN 364
+EHY C ++LL R G +D+A + M ++P +W++LL AC+ HG +D+ G+ I N
Sbjct: 487 VTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIAN 546
Query: 365 KLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHF 423
+L++ +P + +YV L+ I+ ++ + VR++M + K G+S +E E I +
Sbjct: 547 ELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
VFD+M ++ VSW+ MI G V N E G++ F M+ + +RPN
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNY 266
Query: 187 XECGRFVHSTIESLKFR----ITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNV 242
G + I FR + A + MY +CG + SR LFE+ +D+ W+
Sbjct: 267 ---GSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSS 323
Query: 243 MICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
MI G A G + + L ++ EG +VT + +++AC+ L+S + ++ C
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC- 382
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
G + ++D+ A+ G + A + +T E D V W+++++A +HG
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHG 433
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 10/270 (3%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
D V NS+++ + KVFDEM RD VS+ ++I Q+GLL + ++ M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 164 EKGIRP-NEXXXXXXXXXXXXXXXXECGRFVHS-TIESLKFRITVPVGTALVDMYAKCGC 221
G P +E + R H+ + + + +V + TALVDMY K
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 222 IEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNA 281
+ +F+ + K+ +W MI G ++ + + LF E P VT + VL A
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 282 CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPV 341
C S + + +G + + + R G V + L ET V D V
Sbjct: 261 CVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR-DVV 319
Query: 342 LWATLLDACKVHGFVDMGE--KIGNKLIQL 369
+W+++ + G+ + G+ ++ N L Q+
Sbjct: 320 MWSSM-----ISGYAETGDCSEVMNLLNQM 344
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 177/383 (46%), Gaps = 38/383 (9%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
+ +T + AL C L G+QVH+ VV G+ D V + L+ L+ G+
Sbjct: 341 DSYTLSGALKICINYV--NLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGN------ 392
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL 151
I+DA K+F +P +D++++S +I G V++G
Sbjct: 393 -----------------------------IQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 152 LEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTA 211
F + + G+ ++ G+ +H + TA
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATA 483
Query: 212 LVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
LVDMY KCG I+ LF+ + +D+ +W +I G +G ++A FHK ++ G P
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPN 543
Query: 272 NVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLI 331
VTF+G+L+AC GL+ E + M YG++P +EHY C+VDLL +AGL EA LI
Sbjct: 544 KVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELI 603
Query: 332 ETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWE 391
M +EPD +W +LL AC H + I KL++ P Y L+ YA W+
Sbjct: 604 NKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWD 663
Query: 392 DVVRVRKLMIEKVSKKVAGWSLV 414
+ +VR+ +K+ K +G S +
Sbjct: 664 QLSKVRE-AAKKLGAKESGMSWI 685
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 140/344 (40%), Gaps = 71/344 (20%)
Query: 39 ALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEE 98
L C K A G +Q AHV+K G +++VF+ N +I +Y + F+
Sbjct: 11 GLRHCGKVQAFKRGESIQ--AHVIKQGISQNVFIANNVISMYVD-------FRL------ 55
Query: 99 DTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLEC 158
+ DA KVFDEM ER++V+W+TM+ GY +G +E
Sbjct: 56 ----------------------LSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIEL 93
Query: 159 FSVMREKGIR-PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYA 217
+ M + NE + G V+ I R V + ++VDMY
Sbjct: 94 YRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYV 153
Query: 218 KCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKF----------LSEG 267
K G + ++ + F+ I +WN +I G GL +A+ LFH+ L G
Sbjct: 154 KNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISG 213
Query: 268 FI----PVNVTFV------GV----------LNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
F+ P + F+ G+ L ACS GGL++ GK+ +V G++
Sbjct: 214 FVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKS-GLESS 272
Query: 308 MEHYGCMVDLLARAGLVDEAVHLI--ETMTVEPDPVLWATLLDA 349
++D+ + G + A + E + V +W ++L
Sbjct: 273 PFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 141/334 (42%), Gaps = 36/334 (10%)
Query: 38 FALHACTKRAASG--LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFE 95
FAL K + G L G Q+H VVK G F +ALI +Y CGS + + VF
Sbjct: 239 FALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYA-ADVFH 297
Query: 96 EEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDG 155
+E+ + S V WNS+L+G + N E A + ++ + D+ S + G ++
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALK------- 350
Query: 156 LECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDM 215
C + + + G VHS + + + VG+ LVD+
Sbjct: 351 -ICINYVNLR-----------------------LGLQVHSLVVVSGYELDYIVGSILVDL 386
Query: 216 YAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTF 275
+A G I+ + LF + KDI ++ +I G G A LF + + G
Sbjct: 387 HANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIV 446
Query: 276 VGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT 335
+L CS + GK+ L + G + E +VD+ + G +D V L + M
Sbjct: 447 SNILKVCSSLASLGWGKQIHGLCIK-KGYESEPVTATALVDMYVKCGEIDNGVVLFDGM- 504
Query: 336 VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
+E D V W ++ +G V+ + +K+I +
Sbjct: 505 LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 161/373 (43%), Gaps = 29/373 (7%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
++ P+++I +Y ML N+ ++ L AC + G+ V+ + K
Sbjct: 83 SDGKPNKAIELYRRMLDSEE-EAANEFMYSAVLKACG--LVGDIQLGILVYERIGKENLR 139
Query: 68 RDVFVRNALIHLYCECGSSVE---SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
DV + N+++ +Y + G +E SFK + +WN++++G + G + +A
Sbjct: 140 GDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSS-------TSWNTLISGYCKAGLMDEA 192
Query: 125 EKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXX 184
+F MP+ +VVSW+ +I G+V G LE M+ +G+ +
Sbjct: 193 VTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 185 XXXECGRFVH-----STIESLKFRITVPVGTALVDMYAKCGCIEKSRALF--ESIS-GKD 236
G+ +H S +ES F I+ AL+DMY+ CG + + +F E ++
Sbjct: 252 GLLTMGKQLHCCVVKSGLESSPFAIS-----ALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
+ WN M+ G + + AL L + + T G L C + G + +
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFV 356
L+V G + + +VDL A G + +A L + D + ++ L+ C GF
Sbjct: 367 LVV-VSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFN 424
Query: 357 DMGEKIGNKLIQL 369
+ + +LI+L
Sbjct: 425 SLAFYLFRELIKL 437
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 31 PNQHTFTFA--LHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
PN+ F+ + C K + L + ++KLG D F+ + ++ + C +S+
Sbjct: 404 PNKDIIAFSGLIRGCVKSGFNSLA--FYLFRELIKLGLDADQFIVSNILKV-CSSLASLG 460
Query: 89 SFKRVFEEEEDTLC------SDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTM 142
K++ LC S+ VT +++ V+ GEI + +FD M ERDVVSW+ +
Sbjct: 461 WGKQI-----HGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGI 515
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF 202
I+G+ QNG +E+ F M GI PN+ E R ST+E++K
Sbjct: 516 IVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEAR---STLETMKS 572
Query: 203 RITVPVGT----ALVDMYAKCGCIEKSRALFESI---SGKDIWTWNVMICGLASHGLAKD 255
+ +VD+ + G +++ L + K IWT + CG +H A
Sbjct: 573 EYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACG--THKNAGL 630
Query: 256 ALALFHKFLSEGFIPVNVTFVGVLNACSMGGL 287
+ K L +GF + + NA + G+
Sbjct: 631 VTVIAEKLL-KGFPDDPSVYTSLSNAYATLGM 661
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 37/186 (19%)
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL 264
V + ++ MY + + +F+ +S ++I TW M+ G S G A+ L+ + L
Sbjct: 39 NVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRML 98
Query: 265 -SEGFIPVNVTFVGVLNACSMGGLVSEGKRYF---------------NLMVDCYG----- 303
SE + VL AC + G + G + N +VD Y
Sbjct: 99 DSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRL 158
Query: 304 ----------IQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
++P + ++ +AGL+DEAV L M +P+ V W C +
Sbjct: 159 IEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP-QPNVVSW-----NCLIS 212
Query: 354 GFVDMG 359
GFVD G
Sbjct: 213 GFVDKG 218
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 169/319 (52%), Gaps = 9/319 (2%)
Query: 101 LCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFS 160
L S + N++++ +NG+I A+ +F+ ++++SW+ +I G+ NG +GLE FS
Sbjct: 417 LSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFS 476
Query: 161 VMREKGIR--PNEXXXXXXXXXXXXXXXXECGRFVHS-TIESLKFRITVPVGTALVDMYA 217
+ E +R P+ G H+ + +F+ T+ +G AL++MY+
Sbjct: 477 CLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETL-IGNALINMYS 535
Query: 218 KCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG-FIPVNVTFV 276
+CG I+ S +F +S KD+ +WN +I + HG ++A+ + EG IP TF
Sbjct: 536 QCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFS 595
Query: 277 GVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHL--IETM 334
VL+ACS GLV EG FN MV+ +G+ ++H+ C+VDLL RAG +DEA L I
Sbjct: 596 AVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEK 655
Query: 335 TVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVV 394
T+ +W L AC HG + +G+ + L++ + YVQL+ IYA A W++
Sbjct: 656 TIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAE 715
Query: 395 RVRKL--MIEKVSKKVAGW 411
R+ MI + ++ W
Sbjct: 716 ETRRAINMIGAMKQRGCSW 734
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 156/333 (46%), Gaps = 34/333 (10%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
++P+Q++ + A+ T R G QVH + ++ G V N L+ LY G+ +
Sbjct: 53 LRPDQYSVSLAI--TTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGN-LA 109
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVS-WSTMIMGYV 147
S K+ F+E ++ DV +W ++L+ + G+I A +VFD+MPERD V+ W+ MI G
Sbjct: 110 SLKKKFDEIDE---PDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCK 166
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
++G E +E F M + G+R ++ + G+ VHS + F I
Sbjct: 167 ESGYHETSVELFREMHKLGVR-HDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASS 225
Query: 208 VGTALVDMYAKCGCIEKSRALFE--SISGKDIWTWNVMICGLASHGLAKD-ALALFHKFL 264
V AL+ MY C + + +FE ++ +D T+NV+I GLA G +D +L +F K L
Sbjct: 226 VVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKML 283
Query: 265 SEGFIPVNVTFVGVLNACSMGGL--------VSEGKRYFNLMVDCYGIQPEMEHYGCMVD 316
P ++TFV V+ +CS + + G + L+ + M Y D
Sbjct: 284 EASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSN-----ATMTMYSSFED 338
Query: 317 LLARAGLVDEAVHLIETMTVEPDPVLWATLLDA 349
A H + E D V W T++ +
Sbjct: 339 F--------GAAHKVFESLEEKDLVTWNTMISS 363
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 171/436 (39%), Gaps = 83/436 (19%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
ES+ ++ ML ++P TF + +C+ A G QVH +K G+ + V
Sbjct: 274 ESLLVFRKMLEAS--LRPTDLTFVSVMGSCSCAAM-----GHQVHGLAIKTGYEKYTLVS 326
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
NA + +Y SS E F A KVF+ + E
Sbjct: 327 NATMTMY----SSFEDFGA-------------------------------AHKVFESLEE 351
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
+D+V+W+TMI Y Q L + + + M G++P+E E V
Sbjct: 352 KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE---MV 408
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
+ I + + AL+ Y+K G IEK+ LFE K++ +WN +I G +G
Sbjct: 409 QACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFP 468
Query: 254 KDALALFHKFLSEG--FIPVNVTFVGVLNAC-SMGGLV--SE----------------GK 292
+ L F L +P T +L+ C S L+ S+ G
Sbjct: 469 FEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGN 528
Query: 293 RYFNLMVDCYGIQPEMEHYGCM-----------VDLLARAGLVDEAVHLIETMTVE---- 337
N+ C IQ +E + M + +R G + AV+ +TM E
Sbjct: 529 ALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVI 588
Query: 338 PDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPM--HDGHYVQLAGIYAKARKWEDVVR 395
PD ++ +L AC G V+ G +I N +++ + + H+ L + +A ++
Sbjct: 589 PDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAES 648
Query: 396 VRKLMIEKVSKKVAGW 411
+ K+ + + +V W
Sbjct: 649 LVKISEKTIGSRVDVW 664
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N P E + +S +L + P+ +T + L C ++ LGS Q HA+V++ G +
Sbjct: 465 NGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGS--QTHAYVLRHGQFK 522
Query: 69 DVFVRNALIHLYCECGS---SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAE 125
+ + NALI++Y +CG+ S+E F ++ E+ DVV+WNS+++ R+GE +A
Sbjct: 523 ETLIGNALINMYSQCGTIQNSLEVFNQMSEK-------DVVSWNSLISAYSRHGEGENAV 575
Query: 126 KVFDEMPER-----DVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
+ M + D ++S ++ GL+E+GLE F+ M E
Sbjct: 576 NTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVE 619
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 126/327 (38%), Gaps = 45/327 (13%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
V+ ++ F L C L G QVH+ V+K GF V NALI +Y C V+
Sbjct: 186 VRHDKFGFATILSMCDY---GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVD 242
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
+ VFEE D D VT+N V+ G+ G RD
Sbjct: 243 AC-LVFEET-DVAVRDQVTFNVVIDGLA--GFKRD------------------------- 273
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPV 208
+ L F M E +RP + G VH + V
Sbjct: 274 -----ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLV 325
Query: 209 GTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGF 268
A + MY+ + +FES+ KD+ TWN MI L K A++++ + G
Sbjct: 326 SNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 269 IPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAV 328
P TF G L A S+ V E + +G+ ++E ++ ++ G +++A
Sbjct: 386 KPDEFTF-GSLLATSLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKAD 441
Query: 329 HLIETMTVEPDPVLWATLLDACKVHGF 355
L E ++ + + W ++ +GF
Sbjct: 442 LLFER-SLRKNLISWNAIISGFYHNGF 467
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 188/393 (47%), Gaps = 19/393 (4%)
Query: 28 FVKP-NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSS 86
F P + H F+ AL +C LG V HAH VK F + FV AL+ +Y +C S
Sbjct: 42 FALPLDAHVFSLALKSCAAAFRPVLGGSV--HAHSVKSNFLSNPFVGCALLDMYGKC-LS 98
Query: 87 VESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF---DEMPERDVVSWSTMI 143
V +++F+E + V WN++++ G++++A +++ D MP S++ +I
Sbjct: 99 VSHARKLFDEIPQR---NAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES--SFNAII 153
Query: 144 MGYVQNGLLEDG----LECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIES 199
G V EDG +E + M E +PN + +HS
Sbjct: 154 KGLVGT---EDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFR 210
Query: 200 LKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALAL 259
+ + LV+ Y +CG I + +F+S+ +D+ W+ +I A HG A+ AL
Sbjct: 211 NLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKT 270
Query: 260 FHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLA 319
F + P ++ F+ VL ACS GL E YF M YG++ +HY C+VD+L+
Sbjct: 271 FQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLS 330
Query: 320 RAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQ 379
R G +EA +I+ M +P W LL AC+ +G +++ E +L+ ++P + +YV
Sbjct: 331 RVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVL 390
Query: 380 LAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
L IY + E+ R+R M E K G S
Sbjct: 391 LGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 191/414 (46%), Gaps = 39/414 (9%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
++ +A+ L R ++P+++T + + C+ L G Q A +K+GF + V
Sbjct: 215 NKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRE--LSKGKQALALCIKMGFLSNSIV 272
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
A I ++ +C + D+ K+F E+
Sbjct: 273 LGAGIDMFSKCN-----------------------------------RLDDSVKLFRELE 297
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+ D V ++MI Y + ED L F + + +RP++ G
Sbjct: 298 KWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDH-GAD 356
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
VHS + L F + V T+L++MY K G ++ + +F GKD+ WN +I GLA +
Sbjct: 357 VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSR 416
Query: 253 AKDALALFHKFL-SEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
A ++LA+F++ L ++ P VT +G+L AC G V+EG + F+ M +G+ P EHY
Sbjct: 417 AVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHY 476
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDP 371
C+++LL R G+++EA + + + EP +W +L A G + E + +++ +P
Sbjct: 477 ACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEP 536
Query: 372 MHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVA 425
Y+ L IY +WE+ V++R M E K G S + +E + F A
Sbjct: 537 KSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 10/298 (3%)
Query: 57 VHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVV 116
VHA +++ GF R + N + LY + GS + + + +F++ D + +TWN L G+
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQ-LFDDIPD---KNTITWNVCLKGLF 81
Query: 117 RNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
+NG + +A +FDEMPERDVVSW+TMI G V G E G+ F M+ IRP E
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 177 XXXXXXXXXXXECGRFVH-STIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK 235
G +H + I S R + V +++DMY + G + + ++F ++ +
Sbjct: 142 LASLVTCVRH---GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 236 DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF 295
D+ +WN +I + G + AL F P T V++ CS +S+GK+
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 296 NLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVH 353
L + G G +D+ ++ +D++V L + + D VL +++ + H
Sbjct: 259 ALCIK-MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWH 314
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 164/345 (47%), Gaps = 13/345 (3%)
Query: 8 ANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFA 67
AN ++++ ML+ +P ++TF+ AL +C Q+H+ +V++G+
Sbjct: 393 ANKDGPICLSLFLQMLQMG--FRPTEYTFSTALKSCCVTELQ------QLHSVIVRMGYE 444
Query: 68 RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV 127
+ +V ++L+ Y + ++ + T VV N V R G+ ++ K+
Sbjct: 445 DNDYVLSSLMRSYAKNQLMNDALLLLDWASGPT---SVVPLNIVAGIYSRRGQYHESVKL 501
Query: 128 FDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
+ + D VSW+ I ++ E+ +E F M + IRP++
Sbjct: 502 ISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDL 561
Query: 188 ECGRFVHSTIESLKFRIT-VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICG 246
G +H I F V L+DMY KCG I +FE K++ TW +I
Sbjct: 562 TLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISC 621
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
L HG ++AL F + LS GF P V+F+ +L AC GG+V EG F M D YG++P
Sbjct: 622 LGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEP 680
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACK 351
EM+HY C VDLLAR G + EA HLI M D +W T LD C
Sbjct: 681 EMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 116/273 (42%), Gaps = 37/273 (13%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
NS+++ + G AE++F + D+VSW+ +I ++ L+ F M E G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
PN+ CGR +H + + +G AL+D YAKCG +E SR
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 229 FESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLV 288
F+ I K+I WN ++ G A+ L+LF + L GF P TF L +C V
Sbjct: 374 FDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCC----V 428
Query: 289 SEGKRYFNLMV------DCYGIQPEMEHYG---CMVDLL--------------------- 318
+E ++ +++V + Y + M Y M D L
Sbjct: 429 TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 319 -ARAGLVDEAVHLIETMTVEPDPVLWATLLDAC 350
+R G E+V LI T+ +PD V W + AC
Sbjct: 489 YSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 11/191 (5%)
Query: 100 TLCS----DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDG 155
TLCS V N++++ + GE+ A KVFD+MPER+ VS++T+I GY + G ++
Sbjct: 40 TLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKA 99
Query: 156 LECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP---VGTAL 212
FS MR G PN+ G +H SLK+ + + VGT L
Sbjct: 100 WGVFSEMRYFGYLPNQ--STVSGLLSCASLDVRAGTQLHGL--SLKYGLFMADAFVGTCL 155
Query: 213 VDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN 272
+ +Y + +E + +FE + K + TWN M+ L G K+ + F + + G
Sbjct: 156 LCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTE 215
Query: 273 VTFVGVLNACS 283
+F+GVL S
Sbjct: 216 SSFLGVLKGVS 226
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 124/318 (38%), Gaps = 42/318 (13%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLG-FARDVFVRNALIHLYCECGSSVES 89
PNQ T + L +C A+ + +G Q+H +K G F D FV L+ LY
Sbjct: 113 PNQSTVS-GLLSC---ASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLY--------- 159
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN 149
R + AE+VF++MP + + +W+ M+
Sbjct: 160 --------------------------GRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
G L++ + F + G E + + +H + + V
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
+L+ Y KCG + +F+ DI +WN +IC A AL LF GF
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
P T+V VL S+ L+S G++ +++ G + + ++D A+ G ++++
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK-NGCETGIVLGNALIDFYAKCGNLEDS-R 371
Query: 330 LIETMTVEPDPVLWATLL 347
L + + V W LL
Sbjct: 372 LCFDYIRDKNIVCWNALL 389
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 175/390 (44%), Gaps = 42/390 (10%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N E+ + M + + + TF+ L AC + G Q+HA + K+ +
Sbjct: 221 NGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR------IEQGKQIHAILFKVSYQF 274
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
D+ V AL+++Y ++ + DA + F
Sbjct: 275 DIPVATALLNMY-----------------------------------AKSNHLSDARECF 299
Query: 129 DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+ M R+VVSW+ MI+G+ QNG + + F M + ++P+E
Sbjct: 300 ESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW 359
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLA 248
+ V + + + V +L+ Y++ G + ++ F SI D+ +W +I LA
Sbjct: 360 EIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALA 419
Query: 249 SHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEM 308
SHG A+++L +F L + P +TF+ VL+ACS GGLV EG R F M + Y I+ E
Sbjct: 420 SHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAED 478
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
EHY C++DLL RAG +DEA ++ +M EP A C +H + + KL++
Sbjct: 479 EHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLE 538
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRK 398
++P +Y L+ Y W +RK
Sbjct: 539 IEPTKPVNYSILSNAYVSEGHWNQAALLRK 568
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 157/339 (46%), Gaps = 44/339 (12%)
Query: 35 TFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVF 94
+F + CT ++ + +G+Q+H +VK G F +L+H Y +CG VE
Sbjct: 144 SFMGLIRLCTD--STNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVE------ 195
Query: 95 EEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLED 154
A +VF+ + +RD+V W+ ++ YV NG+++
Sbjct: 196 -----------------------------ARRVFEAVLDRDLVLWNALVSSYVLNGMID- 225
Query: 155 GLECFSVMREKGIRPNEXXXXXXXXXXXXXX-XXECGRFVHSTIESLKFRITVPVGTALV 213
E F +++ G N E G+ +H+ + + ++ +PV TAL+
Sbjct: 226 --EAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALL 283
Query: 214 DMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNV 273
+MYAK + +R FES+ +++ +WN MI G A +G ++A+ LF + L E P +
Sbjct: 284 NMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDEL 343
Query: 274 TFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIET 333
TF VL++C+ + E K+ MV G + ++ +R G + EA+ +
Sbjct: 344 TFASVLSSCAKFSAIWEIKQ-VQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHS 402
Query: 334 MTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ-LDP 371
+ EPD V W +++ A HGF + ++ ++Q L P
Sbjct: 403 IR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQP 440
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 171/341 (50%), Gaps = 8/341 (2%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
NS++ R ++R A VF ++ + +W+++I G+ N E+ M G
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTI-ESLKFRITVPVGTALVDMYAKCGCIEKSRA 227
PN + G+ H I ++ + + +LVDMYAK G I ++
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 228 LFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGL 287
+F+S+ +D T+ +I G G + ALA F G P +VT V VL+ACS L
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
V EG F M +GI+ +EHY CMVDL RAG +D+A + T+ EP + ATLL
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLL 600
Query: 348 DACKVHGFVDMGEKIGNK-LIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSK 406
AC +HG ++GE +K L++ P H GHY+ LA +YA W +V V+ L+ + +
Sbjct: 601 KACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQ 660
Query: 407 KVAGWSLV----ELEGGIHHFVAGDK--DHDCSSDIYRMLE 441
K ++L+ EL+G + + D + + SSD R++E
Sbjct: 661 KAHEFALMETDSELDGENNKPMNDDSVINQEQSSDEERLVE 701
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 156/346 (45%), Gaps = 15/346 (4%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N ES+++Y M+ + ++ ++ T+ + AC A G VH +
Sbjct: 162 NKRFQESVSVYKRMMSKG--IRADEFTYPSVIKACA--ALLDFAYGRVVHGSIEVSSHRC 217
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+++V NALI +Y G V+ +R+F+ + D V+WN+++ ++ +A K+
Sbjct: 218 NLYVCNALISMYKRFGK-VDVARRLFDRMSE---RDAVSWNAIINCYTSEEKLGEAFKLL 273
Query: 129 DEM----PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXX 184
D M E +V+W+T+ G ++ G L C MR +R
Sbjct: 274 DRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 185 XXXECGRFVHS-TIESLKFRITVP-VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNV 242
+ G+ H I S F + V +L+ MY++C + + +F+ + + TWN
Sbjct: 334 GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 243 MICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
+I G A + +++ L + L GF P ++T +L + G + GK + ++
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLD 348
+ + + +VD+ A++G + A + ++M + D V + +L+D
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLID 498
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 6/191 (3%)
Query: 96 EEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDG 155
E + L +VT+ S + I + ++ +P W+ +I Y++N ++
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP------WNVLIGSYIRNKRFQES 168
Query: 156 LECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDM 215
+ + M KGIR +E GR VH +IE R + V AL+ M
Sbjct: 169 VSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISM 228
Query: 216 YAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTF 275
Y + G ++ +R LF+ +S +D +WN +I S +A L + G VT+
Sbjct: 229 YKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTW 288
Query: 276 VGVLNACSMGG 286
+ C G
Sbjct: 289 NTIAGGCLEAG 299
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
++ WNS++ ++GEI A++VFD M +RD V+++++I GY + G E L F M
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIES-LKFRITVPVGTALVDMYAKCGCIE 223
GI+P+ G ++ + +E R+ + + +VD+Y + G ++
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 224 KSRALFESI 232
K+R +F +I
Sbjct: 579 KARDIFHTI 587
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 171/341 (50%), Gaps = 8/341 (2%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
NS++ R ++R A VF ++ + +W+++I G+ N E+ M G
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTI-ESLKFRITVPVGTALVDMYAKCGCIEKSRA 227
PN + G+ H I ++ + + +LVDMYAK G I ++
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 228 LFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGL 287
+F+S+ +D T+ +I G G + ALA F G P +VT V VL+ACS L
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
V EG F M +GI+ +EHY CMVDL RAG +D+A + T+ EP + ATLL
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLL 600
Query: 348 DACKVHGFVDMGEKIGNK-LIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSK 406
AC +HG ++GE +K L++ P H GHY+ LA +YA W +V V+ L+ + +
Sbjct: 601 KACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQ 660
Query: 407 KVAGWSLV----ELEGGIHHFVAGDK--DHDCSSDIYRMLE 441
K ++L+ EL+G + + D + + SSD R++E
Sbjct: 661 KAHEFALMETDSELDGENNKPMNDDSVINQEQSSDEERLVE 701
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 156/346 (45%), Gaps = 15/346 (4%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFAR 68
N ES+++Y M+ + ++ ++ T+ + AC A G VH +
Sbjct: 162 NKRFQESVSVYKRMMSKG--IRADEFTYPSVIKACA--ALLDFAYGRVVHGSIEVSSHRC 217
Query: 69 DVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVF 128
+++V NALI +Y G V+ +R+F+ + D V+WN+++ ++ +A K+
Sbjct: 218 NLYVCNALISMYKRFGK-VDVARRLFDRMSE---RDAVSWNAIINCYTSEEKLGEAFKLL 273
Query: 129 DEM----PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXX 184
D M E +V+W+T+ G ++ G L C MR +R
Sbjct: 274 DRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHI 333
Query: 185 XXXECGRFVHS-TIESLKFRITVP-VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNV 242
+ G+ H I S F + V +L+ MY++C + + +F+ + + TWN
Sbjct: 334 GALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 243 MICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
+I G A + +++ L + L GF P ++T +L + G + GK + ++
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLD 348
+ + + +VD+ A++G + A + ++M + D V + +L+D
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLID 498
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 6/191 (3%)
Query: 96 EEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDG 155
E + L +VT+ S + I + ++ +P W+ +I Y++N ++
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP------WNVLIGSYIRNKRFQES 168
Query: 156 LECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDM 215
+ + M KGIR +E GR VH +IE R + V AL+ M
Sbjct: 169 VSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISM 228
Query: 216 YAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTF 275
Y + G ++ +R LF+ +S +D +WN +I S +A L + G VT+
Sbjct: 229 YKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTW 288
Query: 276 VGVLNACSMGG 286
+ C G
Sbjct: 289 NTIAGGCLEAG 299
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 105 VVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE 164
++ WNS++ ++GEI A++VFD M +RD V+++++I GY + G E L F M
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 165 KGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIES-LKFRITVPVGTALVDMYAKCGCIE 223
GI+P+ G ++ + +E R+ + + +VD+Y + G ++
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 224 KSRALFESI 232
K+R +F +I
Sbjct: 579 KARDIFHTI 587
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 153/314 (48%), Gaps = 4/314 (1%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
D N+++ R +I A KVF + + ++ SW+ +I QN + G E F + R
Sbjct: 615 DTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQN---KAGREVFQLFR 671
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
+ PNE G H + F+ V ALVDMY+ CG +E
Sbjct: 672 NLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLE 731
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI-PVNVTFVGVLNAC 282
+F + I WN +I HG+ + A+ LF + S + P +F+ +L+AC
Sbjct: 732 TGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSAC 791
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL 342
S G + EG Y+ M + +G++P EH +VD+L RAG + EA I + +
Sbjct: 792 SHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGV 851
Query: 343 WATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIE 402
W LL AC HG +G+++ L +++P + +Y+ LA Y WE+ VR+RK++ +
Sbjct: 852 WGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVED 911
Query: 403 KVSKKVAGWSLVEL 416
KK+ G+S++++
Sbjct: 912 NALKKLPGYSVIDV 925
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 4/274 (1%)
Query: 98 EDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLE 157
E L D N+++ + + AE VF M RD+VSW+T++ + NG L+
Sbjct: 216 ETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQ 275
Query: 158 CFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF--RITVPVGTALVDM 215
F M G + G +H + + V VG +++ M
Sbjct: 276 YFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISM 335
Query: 216 YAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS-EGFIPVNVT 274
Y+KCG E + +FE + +D+ + N ++ G A++G+ ++A + ++ S + P T
Sbjct: 336 YSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIAT 395
Query: 275 FVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
V + + C EG+ V +E ++D+ + GL +A L +T
Sbjct: 396 VVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT- 454
Query: 335 TVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
T D V W +++ A +GF + + +++
Sbjct: 455 TTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS 488
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 146/360 (40%), Gaps = 67/360 (18%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
M +C AN P +S+ + +M + + + TF+ + AC+ + L G +H
Sbjct: 261 MTKC--LANGHPRKSLQYFKSMTGSGQ--EADTVTFSCVISACS--SIEELTLGESLHGL 314
Query: 61 VVKLGFARD--VFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRN 118
V+K G++ + V V N++I +Y +CG
Sbjct: 315 VIKSGYSPEAHVSVGNSIISMYSKCG---------------------------------- 340
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMRE-KGIRPNEXXXXXX 177
+ AE VF+E+ RDV+S + ++ G+ NG+ E+ + M+ I+P+
Sbjct: 341 -DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSI 399
Query: 178 XXXXXXXXXXECGRFVHSTIESLKFRI-TVPVGTALVDMYAKCGCIEKSRALFESISGKD 236
GR VH ++ + + V +++DMY KCG ++ LF++ + +D
Sbjct: 400 TSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRD 459
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIP--VNVTFVGVLNACSMGGLVSEGKRY 294
+ +WN MI + +G A LF + +SE T + +L +C S
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD-----SSDSLI 514
Query: 295 FNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
F V C+ L + G + A +ETM+ D W +++ C G
Sbjct: 515 FGKSVHCW---------------LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSG 559
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 150/365 (41%), Gaps = 70/365 (19%)
Query: 54 GVQVHAHVVKLGF-ARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVL 112
G VH + V++ +R + V N++I +Y +CG + ++ + +F+ T D+V+WNS++
Sbjct: 412 GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFK---TTTHRDLVSWNSMI 467
Query: 113 AGVVRNGEIRDAEKVF-------------------------------------------- 128
+ +NG A+ +F
Sbjct: 468 SAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG 527
Query: 129 ---------DEMPE-RDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXX 177
+ M E RD+ SW+++I G +G + L F M RE IR +
Sbjct: 528 DLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGT 587
Query: 178 XXXXXXXXXXECGRFVHS-TIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD 236
GR H I+SL+ + + L+ MY +C IE + +F IS +
Sbjct: 588 ISASGNLGLVLQGRCFHGLAIKSLR-ELDTQLQNTLITMYGRCKDIESAVKVFGLISDPN 646
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
+ +WN +I L+ + ++ LF E P +TFVG+L+A + G S G +
Sbjct: 647 LCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHC 703
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFV 356
++ G Q +VD+ + G+++ + + V W +++ A HGF
Sbjct: 704 HLIR-RGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISA-WNSVISA---HGFH 758
Query: 357 DMGEK 361
MGEK
Sbjct: 759 GMGEK 763
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 23 LRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCE 82
L R ++PN+ TF L A T+ ++ G +Q H H+++ GF + FV AL+ +Y
Sbjct: 669 LFRNLKLEPNEITFVGLLSASTQLGSTSYG--MQAHCHLIRRGFQANPFVSAALVDMYSS 726
Query: 83 CGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP-----ERDVV 137
CG +E+ +VF ++ + + WNSV++ +G A ++F E+ E +
Sbjct: 727 CG-MLETGMKVF---RNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKS 782
Query: 138 SWSTMIMGYVQNGLLEDGLECFSVMREK-GIRP 169
S+ +++ +G +++GL + M EK G++P
Sbjct: 783 SFISLLSACSHSGFIDEGLSYYKQMEEKFGVKP 815
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 212/476 (44%), Gaps = 84/476 (17%)
Query: 12 PSESIAIYSAMLRRRRFVKPN--QHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARD 69
P++++A++ + R P+ HTFT L AC+ S +G QVHA ++K G
Sbjct: 65 PNDTLALFLQIHR----ASPDLSSHTFTPVLGACS--LLSYPETGRQVHALMIKQGAETG 118
Query: 70 VFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFD 129
+ ALI +Y + G V+S RVFE E+ D+V+WN++L+G +RNG+ ++A VF
Sbjct: 119 TISKTALIDMYSKYGHLVDSV-RVFESVEE---KDLVSWNALLSGFLRNGKGKEALGVFA 174
Query: 130 EMPE-------------------------------------RDVVSWST-MIMGYVQNGL 151
M RD+V T MI Y GL
Sbjct: 175 AMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGL 234
Query: 152 LEDGLECFS--------VMREKGI-------------------RPNEXXXXXXXXXXXXX 184
+ + ++ ++ VM I RPN
Sbjct: 235 INEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDN 294
Query: 185 XXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMI 244
G+ +H F + L+DMY KCG I ++R +F +I K + +W MI
Sbjct: 295 SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 245 CGLASHGLAKDALALFHKFLSE--GFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
A +G AL +F + E G +P +VTF+ V++AC+ GLV EGK F +M + Y
Sbjct: 355 DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKY 414
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDP----VLWATLLDACKVHGFVDM 358
+ P EHY C +D+L++AG +E L+E M + +W +L AC ++ +
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTR 474
Query: 359 GEKIGNKLI-QLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSL 413
GE + +L+ + P + YV ++ YA KW+ V +R + K K AG SL
Sbjct: 475 GEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 4/228 (1%)
Query: 124 AEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXX 183
A+ +FDE+P+RD+ S ++ + ++++G D L F + +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 184 XXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVM 243
E GR VH+ + TAL+DMY+K G + S +FES+ KD+ +WN +
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG 303
+ G +G K+AL +F E T V+ C+ ++ +GK+ + MV G
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQ-VHAMVVVTG 215
Query: 304 IQPEMEHYG-CMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDAC 350
++ G M+ + GL++EA+ + ++ V D V+ +L+ C
Sbjct: 216 --RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 150/293 (51%), Gaps = 1/293 (0%)
Query: 121 IRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
I A VF+ + E D+V+ S++I GY + G ++ L F+ +R G +P+
Sbjct: 258 IASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGS 317
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTW 240
G+ VHS + L + + V +AL+DMY+KCG ++ + +LF I K+I ++
Sbjct: 318 CAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N +I GL HG A A F + L G IP +TF +L C GL+++G+ F M
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKS 437
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGE 360
+GI+P+ EHY MV L+ AG ++EA + ++ D + LL C+VH + E
Sbjct: 438 EFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAE 497
Query: 361 KIGNKLIQLDPMHDGHY-VQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWS 412
+ + + Y V L+ +YA+ +W++V R+R + E K+ G S
Sbjct: 498 VVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 143/326 (43%), Gaps = 39/326 (11%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
D + ++++ + G I +A K+F +P+ D+ W+ MI+GY G + G+ F++M+
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
+G +PN VH+ + VG ALV+MY++C CI
Sbjct: 200 HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 224 KSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACS 283
+ ++F SIS D+ + +I G + G K+AL LF + G P V VL +C+
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCA 319
Query: 284 MGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHL------------- 330
GK + ++ G++ +++ ++D+ ++ GL+ A+ L
Sbjct: 320 ELSDSVSGKEVHSYVIR-LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFN 378
Query: 331 ---------------------IETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKL--- 366
I M + PD + ++ LL C G ++ G++I ++
Sbjct: 379 SLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
Query: 367 IQLDPMHDGHYVQLAGIYAKARKWED 392
++P + HYV + + A K E+
Sbjct: 439 FGIEPQTE-HYVYMVKLMGMAGKLEE 463
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 10/234 (4%)
Query: 118 NGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXX 177
N ++ A K+FD PER V W+++I Y + L FS + RP+
Sbjct: 53 NDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACL 112
Query: 178 XXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI 237
+ R +H G+A+V Y+K G I ++ LF SI D+
Sbjct: 113 ARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDL 172
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL 297
WNVMI G G + LF+ G P T V + + GL+
Sbjct: 173 ALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-----GLIDPSLLLVAW 227
Query: 298 MVDCYGIQPEME---HYGC-MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
V + ++ ++ + GC +V++ +R + A + +++ EPD V ++L+
Sbjct: 228 SVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLI 280
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG---SS 86
KP+ L +C + + S SG +VH++V++LG D+ V +ALI +Y +CG +
Sbjct: 305 KPDCVLVAIVLGSCAELSDSV--SGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCA 362
Query: 87 VESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTM 142
+ F + E+ ++V++NS++ G+ +G A + F E+ E D +++S +
Sbjct: 363 MSLFAGIPEK-------NIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSAL 415
Query: 143 IMGYVQNGLLEDGLECFSVMR-EKGIRPN 170
+ +GLL G E F M+ E GI P
Sbjct: 416 LCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 172/399 (43%), Gaps = 38/399 (9%)
Query: 55 VQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAG 114
+Q+H+ VK G V ALI +Y E ++F E C D+V WN ++
Sbjct: 287 LQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSH--CRDIVAWNGIITA 344
Query: 115 VVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXX 174
V+D PER + F +R++ + P+
Sbjct: 345 FA----------VYD--PER--------------------AIHLFGQLRQEKLSPDWYTF 372
Query: 175 XXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISG 234
+H+ + F + +L+ YAKCG ++ +F+ +
Sbjct: 373 SSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDS 432
Query: 235 KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRY 294
+D+ +WN M+ + HG L +F K P + TF+ +L+ACS G V EG R
Sbjct: 433 RDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRI 489
Query: 295 FNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
F M + P++ HY C++D+L+RA EA +I+ M ++PD V+W LL +C+ HG
Sbjct: 490 FRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHG 549
Query: 355 FVDMGEKIGNKLIQL-DPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSL 413
+G+ +KL +L +P + Y+Q++ IY + + K M +K S
Sbjct: 550 NTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSW 609
Query: 414 VELEGGIHHFVAGDKDHDCSSDIYRMLETIGQGITAAGY 452
E+ +H F +G + +YR L+ + + GY
Sbjct: 610 TEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGY 648
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 150/370 (40%), Gaps = 99/370 (26%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVK--LGFARDVFVRNALIHLYCECGSSVES 89
+Q + AC ++ L G+ +H H++ ++++V + N LI++Y +CG+
Sbjct: 58 SQQAYAALFQACAEQ--RNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGN---- 111
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN 149
I A +VFD MPER+VVSW+ +I GYVQ
Sbjct: 112 -------------------------------ILYARQVFDTMPERNVVSWTALITGYVQA 140
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
G ++G FS M PNE E G+ VH L ++ V
Sbjct: 141 GNEQEGFCLFSSMLSHCF-PNE----FTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVA 195
Query: 210 TALVDMYAKC---GCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSE 266
A++ MY +C ++ +FE+I K++ TWN MI L K A+ +F + S+
Sbjct: 196 NAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSD 255
Query: 267 GFIPVNVTFVGVLNACS-------------------------MGGLVSEG-------KRY 294
G V +LN CS GLV++ K Y
Sbjct: 256 G---VGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVY 312
Query: 295 FNLM---VDCYGIQPEMEHYGCMVDLLARAGLV--------DEAVHLIETMTVE---PDP 340
++ DCY + EM H C D++A G++ + A+HL + E PD
Sbjct: 313 SEMLEDYTDCYKLFMEMSH--CR-DIVAWNGIITAFAVYDPERAIHLFGQLRQEKLSPDW 369
Query: 341 VLWATLLDAC 350
++++L AC
Sbjct: 370 YTFSSVLKAC 379
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 161/394 (40%), Gaps = 46/394 (11%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E ++S+ML PN+ T + L +C G QVH +KLG ++V
Sbjct: 145 EGFCLFSSMLSH---CFPNEFTLSSVLTSCRYEP------GKQVHGLALKLGLHCSIYVA 195
Query: 74 NALIHLYCECGSSVESFK--RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
NA+I +Y C +++ VFE + ++VTWNS++A + A VF M
Sbjct: 196 NAVISMYGRCHDGAAAYEAWTVFEAIK---FKNLVTWNSMIAAFQCCNLGKKAIGVFMRM 252
Query: 132 PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
V G+ + LL C S+ + + PNE +C
Sbjct: 253 HSDGV--------GFDRATLLNI---CSSLYKSSDLVPNE--------------VSKCCL 287
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKC--GCIEKSRALFESISGKDIWTWNVMICGLAS 249
+HS V TAL+ +Y++ + + E +DI WN +I A
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAV 347
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
+ + A+ LF + E P TF VL AC+ G + + + V G +
Sbjct: 348 YD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACA-GLVTARHALSIHAQVIKGGFLADTV 405
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
++ A+ G +D + + + M D V W ++L A +HG VD + K+ +
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQVDSILPVFQKM-DI 463
Query: 370 DPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEK 403
+P ++ L + A + E+ +R+ + M EK
Sbjct: 464 NP-DSATFIALLSACSHAGRVEEGLRIFRSMFEK 496
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 12 PSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVF 71
P +I ++ + R+ + P+ +TF+ L AC + + +HA V+K GF D
Sbjct: 350 PERAIHLFGQL--RQEKLSPDWYTFSSVLKACAGLVTAR--HALSIHAQVIKGGFLADTV 405
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
+ N+LIH Y +CG S++ RVF++ + DVV+WNS+L +G++ VF +M
Sbjct: 406 LNNSLIHAYAKCG-SLDLCMRVFDDMDS---RDVVSWNSMLKAYSLHGQVDSILPVFQKM 461
Query: 132 P-ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREK 165
D ++ ++ G +E+GL F M EK
Sbjct: 462 DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEK 496
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 163/313 (52%), Gaps = 18/313 (5%)
Query: 9 NSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGV--QVHAHVVKLGF 66
N +++ +++ MLR V+PN+ T+ + AC+ RA L + + V+L
Sbjct: 242 NGFTEDALRLFNDMLRLG--VRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRL-- 297
Query: 67 ARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEK 126
+ FV+ AL+ ++ +C ++S +R+F E ++VTWN++++G R G++ A +
Sbjct: 298 --NCFVKTALLDMHAKC-RDIQSARRIFNELGTQ--RNLVTWNAMISGYTRIGDMSSARQ 352
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG-IRPNEXXXXXXXXXXXXXX 185
+FD MP+R+VVSW+++I GY NG +E F M + G +P+E
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 186 XXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMIC 245
E G + I + ++ +L+ MYA+ G + +++ +F+ + +D+ ++N +
Sbjct: 413 DLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFT 472
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
A++G + L L K EG P VT+ VL AC+ GL+ EG+R F + +
Sbjct: 473 AFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN----- 527
Query: 306 PEMEHYGCMVDLL 318
P +HY CM DLL
Sbjct: 528 PLADHYACM-DLL 539
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 178/423 (42%), Gaps = 108/423 (25%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEE----------------- 96
G+ A V KLGF +D +VRN ++ +Y + SVES ++VF++
Sbjct: 120 GILFQALVEKLGFFKDPYVRNVIMDMYVK-HESVESARKVFDQISQRKGSDWNVMISGYW 178
Query: 97 ---EEDTLC--------SDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
++ C +DVV+W ++ G + ++ +A K FD MPE+ VVSW+ M+ G
Sbjct: 179 KWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
Y QNG ED L F+ M G+RPNE R + I+ + R+
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN 298
Query: 206 VPVGTALVDMYAKC--------------------------------GCIEKSRALFESIS 233
V TAL+DM+AKC G + +R LF+++
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 234 GKDIWTWNVMICGLASHGLAKDALALFHKFLSEG-FIPVNVTFVGVLNAC---------- 282
+++ +WN +I G A +G A A+ F + G P VT + VL+AC
Sbjct: 359 KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 283 -------------------------SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDL 317
+ GG + E KR F+ M + ++ Y +
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-----ERDVVSYNTLFTA 473
Query: 318 LARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHD 374
A G E ++L+ M +EPD V + ++L AC G + G++I + +P+ D
Sbjct: 474 FAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI--RNPLAD 531
Query: 375 GHY 377
HY
Sbjct: 532 -HY 533
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 88/236 (37%), Gaps = 27/236 (11%)
Query: 127 VFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
+FD + +V ++M + + + D L + GI P+
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPD--------AFSFPVVI 113
Query: 187 XECGRF---VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVM 243
GRF + +E L F V ++DMY K +E +R +F+ IS + WNVM
Sbjct: 114 KSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG 303
I G G ++A LF + V G + ++YF+ M
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDL----ENARKYFDRM----- 224
Query: 304 IQPEME--HYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHG 354
PE + M+ A+ G ++A+ L M V P+ W ++ AC
Sbjct: 225 --PEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA 278
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 180/388 (46%), Gaps = 40/388 (10%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGF-ARDVFVRNALIHLYCECGSSVE 88
+P+ F L+ C++ S + SG Q+H +V+K+GF + V++ALI +Y +C
Sbjct: 312 RPSIRPFMSFLNFCSRN--SDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKC----- 364
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
NG I ++ ++ +P ++ ++++ +
Sbjct: 365 -----------------------------NG-IENSALLYQSLPCLNLECCNSLMTSLMH 394
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXX--XXECGRFVHSTIESLKFRITV 206
G+ +D +E F +M ++G +E VH + V
Sbjct: 395 CGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADV 454
Query: 207 PVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSE 266
V +L+D Y K G E SR +F+ + +I+ +I G A +G+ D + + +
Sbjct: 455 AVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRM 514
Query: 267 GFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDE 326
IP VT + VL+ CS GLV EG+ F+ + YGI P + Y CMVDLL RAGLV++
Sbjct: 515 NLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEK 574
Query: 327 AVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAK 386
A L+ + D V W++LL +C++H +G + L+ L+P + Y+Q++ Y +
Sbjct: 575 AERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFE 634
Query: 387 ARKWEDVVRVRKLMIEKVSKKVAGWSLV 414
+E ++R++ + + G+S V
Sbjct: 635 IGDFEISRQIREIAASRELMREIGYSSV 662
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 166/406 (40%), Gaps = 83/406 (20%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRR-RFVKPNQHTFTFALHACTKRAASGLGSGVQVHA 59
++RC + ES ++ LR V N T+ + + C+ + G Q+H+
Sbjct: 184 LLRCFCQTG----ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRL--VYEGKQLHS 237
Query: 60 HVVKLGFA-RDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRN 118
VVK G+ ++FV N L+ Y CG L+G +R+
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGD--------------------------LSGSMRS 271
Query: 119 GEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
F+ +PE+DV+SW++++ G + D L+ FS M+ G RP+
Sbjct: 272 ---------FNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFL 322
Query: 179 XXXXXXXXXECGRFVHSTIESLKFRIT-VPVGTALVDMYAKCGCIEKSRALFESISGKDI 237
+ G+ +H + + F ++ + V +AL+DMY KC IE S L++S+ ++
Sbjct: 323 NFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNL 382
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL 297
N ++ L G+ KD + +F + EG VT VL A S+ + E L
Sbjct: 383 ECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS--LPESLHSCTL 440
Query: 298 -------------------MVDCYGIQPEME------------HYGCMVDLL---ARAGL 323
++D Y + E + C+ ++ AR G+
Sbjct: 441 VHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGM 500
Query: 324 VDEAVHLI---ETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKL 366
+ V ++ + M + PD V ++L C G V+ GE I + L
Sbjct: 501 GTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSL 546
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 128/312 (41%), Gaps = 48/312 (15%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
++ + TF L C+ G+QVH V+ LGF ++FVR+AL+ LY
Sbjct: 108 LRESASTFPSVLSVCSDELFCR--EGIQVHCRVISLGFGCNMFVRSALVGLY-------- 157
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQ 148
+R ++ A K+FDEM +R++ + ++ + Q
Sbjct: 158 -------------------------ACLRLVDV--ALKLFDEMLDRNLAVCNLLLRCFCQ 190
Query: 149 NGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT-VP 207
G + E + M +G+ N G+ +HS + + I+ +
Sbjct: 191 TGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIF 250
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
V LVD Y+ CG + S F ++ KD+ +WN ++ A +G D+L LF K G
Sbjct: 251 VANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWG 310
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ-----PEMEHYGCMVDLLARAG 322
P F+ LN CS + GK+ + CY ++ + ++D+ +
Sbjct: 311 KRPSIRPFMSFLNFCSRNSDIQSGKQ-----IHCYVLKMGFDVSSLHVQSALIDMYGKCN 365
Query: 323 LVDEAVHLIETM 334
++ + L +++
Sbjct: 366 GIENSALLYQSL 377
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 4/267 (1%)
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN 149
F EE L V T N + ++++G + A + FDEM RDVV+++ +I G +
Sbjct: 34 FSSFLEENPSDL---VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRY 90
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
G +E ++ M G+R + G VH + SL F + V
Sbjct: 91 GCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVR 150
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
+ALV +YA ++ + LF+ + +++ N+++ G +K ++ + EG
Sbjct: 151 SALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVA 210
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
+T+ ++ CS LV EGK+ +L+V + +VD + G + ++
Sbjct: 211 KNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMR 270
Query: 330 LIETMTVEPDPVLWATLLDACKVHGFV 356
+ E D + W +++ C +G V
Sbjct: 271 SFNAVP-EKDVISWNSIVSVCADYGSV 296
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 167/343 (48%), Gaps = 14/343 (4%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ ++ ML V+P HT + + AC++ A L G +HA VKL D V
Sbjct: 246 EAVVMFFKMLELN--VRPLNHTVSSVMLACSRSLA--LEVGKVIHAIAVKLSVVADTVVS 301
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
++ +Y +C +ES +RVF++ T D+ +W S ++G +G R+A ++FD MPE
Sbjct: 302 TSVFDMYVKC-DRLESARRVFDQ---TRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
R++VSW+ M+ GYV ++ L+ ++MR++ + + G+
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA 417
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISG-KDIWTWNVMICGLASHGL 252
H I + V V AL+DMY KCG ++ + F +S +D +WN ++ G+A G
Sbjct: 418 HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGR 477
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV-DCYGIQPEMEHY 311
++ AL+ F E P T +L C+ ++ GK ++ D Y I +
Sbjct: 478 SEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR-- 534
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHG 354
G MVD+ ++ D A+ + + D +LW +++ C +G
Sbjct: 535 GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNG 576
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 162/358 (45%), Gaps = 45/358 (12%)
Query: 23 LRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCE 82
L R+ + T + L+ C+ S + G Q H + + G+ +V V NAL+ +Y +
Sbjct: 385 LMRQEIENIDNVTLVWILNVCS--GISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGK 442
Query: 83 CGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE-RDVVSWST 141
CG+ ++ A F +M E RD VSW+
Sbjct: 443 CGT-----------------------------------LQSANIWFRQMSELRDEVSWNA 467
Query: 142 MIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLK 201
++ G + G E L F M+ + +P++ G+ +H +
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDG 526
Query: 202 FRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFH 261
++I V + A+VDMY+KC C + + +F+ + +D+ WN +I G +G +K+ LF
Sbjct: 527 YKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFM 586
Query: 262 KFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARA 321
+EG P +VTF+G+L AC G V G +YF+ M Y I P++EHY CM++L +
Sbjct: 587 LLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKY 646
Query: 322 GLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQ 379
G + + + M +P + + DAC+ + + +G +L+ + HY+Q
Sbjct: 647 GCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM------NDHYLQ 698
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 133/326 (40%), Gaps = 11/326 (3%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
N + + G + DA ++F+EMPERD SW+ +I QNG+ ++ F M G+R
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
E R +H + + V + T++VD+Y KC + +R +
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 229 FESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLV 288
F+ I +WNV++ G +A+ +F K L P+N T V+ ACS +
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 289 SEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLD 348
GK + V + + + D+ + ++ A + + T D W + +
Sbjct: 280 EVGKVIHAIAVK-LSVVADTVVSTSVFDMYVKCDRLESARRVFDQ-TRSKDLKSWTSAMS 337
Query: 349 ACKVHGFVDMGEKIGNKLIQLDPMHD-GHYVQLAGIYAKARKWEDVVRVRKLM---IEKV 404
+ G + +L L P + + + G Y A +W++ + LM IE +
Sbjct: 338 GYAMSGLT----REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
Query: 405 SKKVAGWSLVELEGGIHHFVAGDKDH 430
W ++ + GI G + H
Sbjct: 394 DNVTLVW-ILNVCSGISDVQMGKQAH 418
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
+ VH I + + + L++MY+ CG ++ ++FE +S K++ TW ++I A
Sbjct: 273 AKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAK 332
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
+G +DA+ +F +F EG IP F G+ AC M G V EG +F M YGI P +E
Sbjct: 333 NGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIE 392
Query: 310 HYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQL 369
Y +V++ A G +DEA+ +E M +EP+ +W TL++ +VHG +++G+ + L
Sbjct: 393 DYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFL 452
Query: 370 DPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKD 429
DP + ++R E + V+ +EK S K L ++ + F AGD +
Sbjct: 453 DPTR---------LNKQSR--EGFIPVKASDVEKESLKKRSGILHGVKSSMQEFRAGDTN 501
Query: 430 HDCSSDIYRMLETIGQGITAAGY 452
+ +++++L + + GY
Sbjct: 502 LPENDELFQLLRNLKMHMVEVGY 524
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 135/301 (44%), Gaps = 37/301 (12%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVES 89
+P+ T L C + A + G ++H + +K F +V + +L+ +Y +CG
Sbjct: 415 RPDVVTIATVLPVCAELRA--IKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG----- 467
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQN 149
V IR +FD + +R+V +W+ MI YV+N
Sbjct: 468 --------------------------VPEYPIR----LFDRLEQRNVKAWTAMIDCYVEN 497
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
L G+E F +M RP+ + G+ +H I +F V
Sbjct: 498 CDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS 557
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
++ MY KCG + + F++++ K TW +I + L +DA+ F + +S GF
Sbjct: 558 ARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFT 617
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
P TF VL+ CS G V E R+FNLM+ Y +QP EHY +++LL R G V+EA
Sbjct: 618 PNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQR 677
Query: 330 L 330
L
Sbjct: 678 L 678
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 149/374 (39%), Gaps = 74/374 (19%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
+R + N TF+ L AC +R + L G QVH H+ G + F+R L+H+Y CGS
Sbjct: 104 QRGIPVNATTFSALLEACVRRKS--LLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS 161
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
++DA+KVFDE +V SW+ ++ G
Sbjct: 162 -----------------------------------VKDAQKVFDESTSSNVYSWNALLRG 186
Query: 146 YVQNG--LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFR 203
V +G +D L F+ MRE G+ N G H+
Sbjct: 187 TVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLF 246
Query: 204 ITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKF 263
+V + T+LVDMY KCG + +R +F+ I +DI W MI GLA + +AL LF
Sbjct: 247 NSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM 306
Query: 264 LSEGFIPVN-------VTFVGVLNACSMG----GLVSEGKRYFNL------MVDCY---- 302
+SE I N + +G + A +G V + K Y ++D Y
Sbjct: 307 ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCG 366
Query: 303 -----------GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLD 348
Q + ++ A G D+A+ I M E PD V AT+L
Sbjct: 367 DMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLP 426
Query: 349 ACKVHGFVDMGEKI 362
C + G++I
Sbjct: 427 VCAELRAIKQGKEI 440
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 48 ASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVT 107
AS L G++ HA +K G VF++ +L+ +Y +CG
Sbjct: 227 ASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCG----------------------- 263
Query: 108 WNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKG 166
++ A +VFDE+ ERD+V W MI G N + L F M E+
Sbjct: 264 ------------KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEK 311
Query: 167 IRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP-VGTALVDMYAKCGCIEKS 225
I PN + G+ VH+ + K + P V + L+D+Y KCG +
Sbjct: 312 IYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASG 371
Query: 226 RALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMG 285
R +F ++ +W ++ G A++G AL EGF P VT VL C+
Sbjct: 372 RRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAEL 431
Query: 286 GLVSEGKRYFNLMVDCYGIQ----PEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPV 341
+ +GK + CY ++ P + ++ + ++ G+ + + L + + + +
Sbjct: 432 RAIKQGKE-----IHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-QRNVK 485
Query: 342 LWATLLD 348
W ++D
Sbjct: 486 AWTAMID 492
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 154/427 (36%), Gaps = 90/427 (21%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVK-LGFARDVFV 72
E++ ++ M+ + + PN T L A LG +VHAHV+K + FV
Sbjct: 298 EALGLFRTMISEEK-IYPNSVILTTILPVLGDVKALKLGK--EVHAHVLKSKNYVEQPFV 354
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+ LI LYC+CG ++ +VF
Sbjct: 355 HSGLIDLYCKCG-----------------------------------DMASGRRVFYGSK 379
Query: 133 ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
+R+ +SW+ ++ GY NG + L M+++G RP+ + G+
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
+H F V + T+L+ MY+KCG E LF+ + +++ W MI +
Sbjct: 440 IHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCD 499
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK-------------------- 292
+ + +F L P +VT VL CS + GK
Sbjct: 500 LRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAR 559
Query: 293 -----------RYFNLMVDCYGIQPEM------EHYGCMVDLLARAGLVDEAVHLIETMT 335
R N D ++ + E YGC L +A++ E M
Sbjct: 560 IIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGC-------NELFRDAINCFEQMV 612
Query: 336 ---VEPDPVLWATLLDACKVHGFVDMGEKIGN---KLIQLDPMHDGHYVQLAGIYAKARK 389
P+ + +L C GFVD + N ++ L P + HY + + + +
Sbjct: 613 SRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE-HYSLVIELLNRCGR 671
Query: 390 WEDVVRV 396
E+ R+
Sbjct: 672 VEEAQRL 678
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 188/444 (42%), Gaps = 44/444 (9%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
+++ +++ ML+R V+ + T A+ AC + + Q+H +K G A + ++
Sbjct: 400 KALKLFTDMLQRG--VELTDFSLTSAVDACGLVSEKKVSE--QIHGFCIKFGTAFNPCIQ 455
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
AL+ + C + DAE++FD+ P
Sbjct: 456 TALLDMCTRCE-----------------------------------RMADAEEMFDQWPS 480
Query: 134 RDVVSWST--MIMGYVQNGLLEDGLECF-SVMREKGIRPNEXXXXXXXXXXXXXXXXECG 190
S +T +I GY +NGL + + F + E+ + +E E G
Sbjct: 481 NLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASH 250
+H + + +G +L+ MYAKC + + +F ++ D+ +WN +I
Sbjct: 541 YQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQ 600
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNAC--SMGGLVSEGKRYFNLMVDCYGIQPEM 308
+ALAL+ + + P +T V++A + +S + F M Y I+P
Sbjct: 601 RNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTT 660
Query: 309 EHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ 368
EHY V +L GL++EA I +M V+P+ + LLD+C++H + +++ ++
Sbjct: 661 EHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILS 720
Query: 369 LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDK 428
P Y+ + IY+ + W +R+ M E+ +K S + E IH F A D
Sbjct: 721 TKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDT 780
Query: 429 DHDCSSDIYRMLETIGQGITAAGY 452
H DIYR LE + GY
Sbjct: 781 SHPQEKDIYRGLEILIMECLKVGY 804
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 37/265 (13%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ ++ M R+ V+PN++TF L AC + S G+Q+H +VK GF VFV
Sbjct: 163 EALKVFFRM-RKAGLVQPNEYTFVAILTACVR--VSRFSLGIQIHGLIVKSGFLNSVFVS 219
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N+L+ LY +++ + C DV+ K+FDE+P+
Sbjct: 220 NSLMSLY--------------DKDSGSSCDDVL-------------------KLFDEIPQ 246
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVM-REKGIRPNEXXXXXXXXXXXXXXXXECGRF 192
RDV SW+T++ V+ G + F M R +G + GR
Sbjct: 247 RDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRE 306
Query: 193 VHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGL 252
+H + + V AL+ Y+K ++K +L+E + +D T+ MI S G+
Sbjct: 307 LHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGM 366
Query: 253 AKDALALFHKFLSEGFIPVNVTFVG 277
A+ +F + I N G
Sbjct: 367 VDSAVEIFANVTEKNTITYNALMAG 391
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 143/329 (43%), Gaps = 31/329 (9%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
+ T + L +CT +S L G ++H +++G +++ V NALI Y S K
Sbjct: 284 DSFTLSTLLSSCTD--SSVLLRGRELHGRAIRIGLMQELSVNNALIGFY----SKFWDMK 337
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL 151
+V E + D VT+ ++ + G + A ++F + E++ ++++ ++ G+ +NG
Sbjct: 338 KVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGH 397
Query: 152 LEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTA 211
L+ F+ M ++G+ + + +H + TA
Sbjct: 398 GLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTA 457
Query: 212 LVDMYAKCGCIEKSRALFESISGKDIWTWNV--------MICGLASHGLAKDALALFHKF 263
L+DM +C + + +F D W N+ +I G A +GL A++LFH+
Sbjct: 458 LLDMCTRCERMADAEEMF------DQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRT 511
Query: 264 LSEGFIPVN-VTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ----PEMEHYGCMVDLL 318
L E + ++ V+ +L C G R + CY ++ ++ ++ +
Sbjct: 512 LCEQKLFLDEVSLTLILAVCGTLGF-----REMGYQIHCYALKAGYFSDISLGNSLISMY 566
Query: 319 ARAGLVDEAVHLIETMTVEPDPVLWATLL 347
A+ D+A+ + TM E D + W +L+
Sbjct: 567 AKCCDSDDAIKIFNTMR-EHDVISWNSLI 594
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 12/261 (4%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG-I 167
N++++ ++ G R+A VF + VVS++ +I G+ + L + L+ F MR+ G +
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 168 RPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAK-----CGCI 222
+PNE G +H I F +V V +L+ +Y K C +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 223 EKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS-EGFIPVNVTFVGVLNA 281
K LF+ I +D+ +WN ++ L G + A LF++ EGF + T +L++
Sbjct: 238 LK---LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 282 CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPV 341
C+ ++ G+ + G+ E+ ++ ++ + + L E M + D V
Sbjct: 295 CTDSSVLLRGRELHGRAIRI-GLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ-DAV 352
Query: 342 LWATLLDACKVHGFVDMGEKI 362
+ ++ A G VD +I
Sbjct: 353 TFTEMITAYMSFGMVDSAVEI 373
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 39/269 (14%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+I+++ M +RR + N T L AC A LG ++HA ++K ++V++
Sbjct: 368 EAISLFRIM--KRRHLIANNLTVVSILRACGSVGALLLGK--ELHAQIIKNSIEKNVYIG 423
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
+ L+ LYC+CG S RDA V ++P
Sbjct: 424 STLVWLYCKCGES-----------------------------------RDAFNVLQQLPS 448
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
RDVVSW+ MI G G + L+ M ++G+ PN GR +
Sbjct: 449 RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI 508
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
HS + V VG+AL+ MYAKCG + ++ +F+S+ K++ +W MI G A +G
Sbjct: 509 HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFC 568
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNAC 282
++AL L ++ +EGF + F +L+ C
Sbjct: 569 REALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 138/323 (42%), Gaps = 40/323 (12%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
N+ F L+ C++RA LG QVH ++VK+G ++ V ++L++ Y +CG
Sbjct: 183 NERMFVCLLNLCSRRAEFELGR--QVHGNMVKVGVG-NLIVESSLVYFYAQCG------- 232
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGL 151
E+ A + FD M E+DV+SW+ +I + G
Sbjct: 233 ----------------------------ELTSALRAFDMMEEKDVISWTAVISACSRKGH 264
Query: 152 LEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTA 211
+ F M PNE GR VHS + + V VGT+
Sbjct: 265 GIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTS 324
Query: 212 LVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
L+DMYAKCG I R +F+ +S ++ TW +I A G ++A++LF I
Sbjct: 325 LMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIAN 384
Query: 272 NVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLI 331
N+T V +L AC G + GK ++ I+ + +V L + G +A +++
Sbjct: 385 NLTVVSILRACGSVGALLLGKELHAQIIK-NSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 332 ETMTVEPDPVLWATLLDACKVHG 354
+ + D V W ++ C G
Sbjct: 444 QQLP-SRDVVSWTAMISGCSSLG 465
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 144/342 (42%), Gaps = 41/342 (11%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
++I ++ ML + PN+ T L AC++ A L G QVH+ VVK DVFV
Sbjct: 267 KAIGMFIGMLNH--WFLPNEFTVCSILKACSEEKA--LRFGRQVHSLVVKRMIKTDVFVG 322
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
+L+ +Y +CG EI D KVFD M
Sbjct: 323 TSLMDMYAKCG-----------------------------------EISDCRKVFDGMSN 347
Query: 134 RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFV 193
R+ V+W+++I + + G E+ + F +M+ + + N G+ +
Sbjct: 348 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 194 HSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLA 253
H+ I V +G+ LV +Y KCG + + + + +D+ +W MI G +S G
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 254 KDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGC 313
+AL + + EG P T+ L AC+ + G+ ++ + +
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG-SA 526
Query: 314 MVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGF 355
++ + A+ G V EA + ++M E + V W ++ +GF
Sbjct: 527 LIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGF 567
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 14/253 (5%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
N++++ VR G++ A KVFD MPE++ V+W+ MI GY++ GL ++ F + GIR
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 169 -PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG-----TALVDMYAKCGCI 222
NE E GR VH + + V VG ++LV YA+CG +
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNM------VKVGVGNLIVESSLVYFYAQCGEL 234
Query: 223 EKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC 282
+ F+ + KD+ +W +I + G A+ +F L+ F+P T +L AC
Sbjct: 235 TSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKAC 294
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL 342
S + G++ +L+V I+ ++ ++D+ A+ G + + + + M+ + V
Sbjct: 295 SEEKALRFGRQVHSLVVK-RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVT 352
Query: 343 WATLLDACKVHGF 355
W +++ A GF
Sbjct: 353 WTSIIAAHAREGF 365
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 134/262 (51%), Gaps = 16/262 (6%)
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASH 250
+ VH I S + ++++MY+ CG +E + +F S+ +++ TW +I A +
Sbjct: 201 KVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKN 260
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEH 310
G +DA+ F +F EG P F + AC + G ++EG +F M YGI P MEH
Sbjct: 261 GQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEH 320
Query: 311 YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLD 370
Y +V +LA G +DEA+ +E+M EP+ LW TL++ +VHG + +G++ + + QLD
Sbjct: 321 YVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
Query: 371 PMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELEGGIHHFVAGDKDH 430
+ + +++ V+ L+ EK+ + G + GI + AGD
Sbjct: 379 A---------SRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNY-----GIRYMAAGDISR 424
Query: 431 DCSSDIYRMLETIGQGITAAGY 452
+ ++Y L+++ + + GY
Sbjct: 425 PENRELYMALKSLKEHMIEIGY 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%)
Query: 103 SDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVM 162
SD+ +NS++ G + DA VF+ MPER++ +W +I + +NG ED ++ FS
Sbjct: 214 SDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRF 273
Query: 163 REKGIRPN 170
+++G +P+
Sbjct: 274 KQEGNKPD 281
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 100/183 (54%)
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL 247
E R VH I +L V A+++MY+ C ++ + +FE + + T VM+
Sbjct: 136 EAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCF 195
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPE 307
++G ++A+ LF +F EG P F V + C++ G V EG F M YGI P
Sbjct: 196 VNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPS 255
Query: 308 MEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
MEHY + +LA +G +DEA++ +E M +EP +W TL++ +VHG V++G++ +
Sbjct: 256 MEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVE 315
Query: 368 QLD 370
+LD
Sbjct: 316 KLD 318
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 130/293 (44%), Gaps = 18/293 (6%)
Query: 152 LEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTA 211
+ + LE ++ +KG + E R VH I L R V
Sbjct: 93 IREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSYHTV--- 149
Query: 212 LVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
++MY+ C + + +F + ++ TW MI LA +G + A+ +F +F+ EG P
Sbjct: 150 -IEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPD 208
Query: 272 NVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLI 331
F V AC G ++EG +F M YG+ ME Y ++++LA G +DEA+ +
Sbjct: 209 KEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFV 268
Query: 332 ETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDP--MHDGHYVQLAGIYAKARK 389
E MTVEP +W TL++ C V G++++G++ + +LD M L A
Sbjct: 269 ERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDSA 328
Query: 390 WEDVVRVRKL-MIEKVSKKVAGWSLVELEGGIHHFVAGDKDHDCSSDIYRMLE 441
E + +R MI KK +H F AGD H + +R L+
Sbjct: 329 MEKLKELRYCQMIRDDPKK-----------RMHEFRAGDTSHLGTVSAFRSLK 370
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 4/250 (1%)
Query: 122 RDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXX 181
R + + ++M E +M Q L +D +E +KG P+
Sbjct: 191 RSSNQSPNQMNEVAPPPSVEEVMRLCQRRLYKDAIELL----DKGAMPDRECFVLLFESC 246
Query: 182 XXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWN 241
E + VH KFR + ++ M+ +C I ++ +F+ + KD+ +W+
Sbjct: 247 ANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWH 306
Query: 242 VMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC 301
+M+C + +G+ DAL LF + G P TF+ V AC+ G + E +F+ M +
Sbjct: 307 LMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNE 366
Query: 302 YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVDMGEK 361
+GI P+ EHY ++ +L + G + EA I + EP W + + ++HG +D+ +
Sbjct: 367 HGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDY 426
Query: 362 IGNKLIQLDP 371
+ ++ +DP
Sbjct: 427 MEELMVDVDP 436
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 37/141 (26%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
P++ F +C + L +VH H ++ F D + N +I ++ EC S
Sbjct: 234 PDRECFVLLFESCANLKS--LEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS----- 286
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMGYVQNG 150
I DA++VFD M ++D+ SW M+ Y NG
Sbjct: 287 ------------------------------ITDAKRVFDHMVDKDMDSWHLMMCAYSDNG 316
Query: 151 LLEDGLECFSVMREKGIRPNE 171
+ +D L F M + G++PNE
Sbjct: 317 MGDDALHLFEEMTKHGLKPNE 337
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 153/346 (44%), Gaps = 55/346 (15%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+ P+ +T+ L C KR S QV + GF+ D NAL+ +Y + E
Sbjct: 275 IAPDAYTYN-TLITCCKRG-SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIM 144
+ K + E + +VT+NS+++ R+G + +A ++ ++M E+ DV +++T++
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 145 GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
G+ + G +E + F MR G +PN
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPN---------------------------------- 418
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESIS----GKDIWTWNVMICGLASHGLAKDALALF 260
+ A + MY G + +F+ I+ DI TWN ++ +G+ + +F
Sbjct: 419 -ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 261 HKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLAR 320
+ GF+P TF +++A S G + + M+D G+ P++ Y ++ LAR
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALAR 536
Query: 321 AGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIG 363
G+ +++ ++ M +P+ + + +LL H + + G++IG
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLL-----HAYAN-GKEIG 576
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 156/391 (39%), Gaps = 25/391 (6%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
KP+ T+T L + A + S + + + G ++ NA I +Y G E
Sbjct: 380 TKPDVFTYTTLLSGFER--AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM------PERDVVSWSTM 142
K E L D+VTWN++LA +NG + VF EM PER+ +++T+
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTL 495
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF 202
I Y + G E + + M + G+ P+ E V + +E +
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 203 RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGL----ASHGLAKDALA 258
+ +L+ YA I +L E + I V++ L + L +A
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 259 LFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLL 318
F + GF P T +++ +V++ + M + G P M Y ++ +
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE-RGFTPSMATYNSLMYMH 674
Query: 319 ARA---GLVDEAVHLIETMTVEPDPVLWATLLDA-CKVHGFVDMGE---KIGNKLIQLDP 371
+R+ G +E + I ++PD + + T++ A C+ D ++ N I D
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Query: 372 MHDGHYVQLAGIYAKARKWEDVVRVRKLMIE 402
+ Y G YA +E+ + V + MI+
Sbjct: 735 I---TYNTFIGSYAADSMFEEAIGVVRYMIK 762
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 125/332 (37%), Gaps = 49/332 (14%)
Query: 49 SGLGSGVQ-VHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDT-LCSDVV 106
+G+ S V V + + GF + N LI Y CGS E V+ D + D+
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS-FEQAMTVYRRMLDAGVTPDLS 525
Query: 107 TWNSVLAGVVRNGEIRDAEKVFDEMPE----RDVVSWSTMIMGYVQNG------------ 150
T+N+VLA + R G +EKV EM + + +++ +++ Y NG
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEE 584
Query: 151 ------------------------LLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
LL + FS ++E+G P+
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 187 XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNV 242
V ++ F ++ +L+ M+++ KS + I K DI ++N
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 243 MICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCY 302
+I + +DA +F + + G +P +T+ + + + + E M+ +
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-H 763
Query: 303 GIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
G +P Y +VD + DEA +E +
Sbjct: 764 GCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 106/263 (40%), Gaps = 13/263 (4%)
Query: 97 EEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLL 152
+ED DV ++ S+++ +G R+A VF +M E +++++ ++ + + G
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP 259
Query: 153 EDGLECF-SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTA 211
+ + M+ GI P+ + V +++ F A
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 212 LVDMYAKCGCIEKSRALFESIS----GKDIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
L+D+Y K +++ + + I T+N +I A G+ +A+ L ++ +G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
P T+ +L+ G V F M + G +P + + + + G E
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 328 VHLIETMTV---EPDPVLWATLL 347
+ + + + V PD V W TLL
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLL 461
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 165/362 (45%), Gaps = 18/362 (4%)
Query: 57 VHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEE-EEDTLCSDVVTWNSVLAGV 115
V + + K F V NALI + + G VE V+ + +E+ + + T+N ++ G+
Sbjct: 174 VSSEIKKFEFPMTVSAANALIKSFGKLGM-VEELLWVWRKMKENGIEPTLYTYNFLMNGL 232
Query: 116 VRNGEIRDAEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNE 171
V + AE+VF+ M + D+V+++TMI GY + G + +E M +G ++
Sbjct: 233 VSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADK 292
Query: 172 XXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFES 231
++ ++ ++ + ++ K G + + +FE+
Sbjct: 293 ITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFEN 352
Query: 232 I----SGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGL 287
+ S ++ + V+I G A G +DA+ L H+ + EGF P VT+ V+N G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 288 VSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWA 344
V E YF+ G+ Y ++D L +AG VDEA L E M+ + D +
Sbjct: 413 VEEALDYFH-TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 345 TLLDACKVHGFVDMGEKIGNKLIQ---LDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMI 401
L+DA H VD + ++ + D + + L+G++ + R E+ +++ +MI
Sbjct: 472 ALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRN-EEALKLWDMMI 530
Query: 402 EK 403
+K
Sbjct: 531 DK 532
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 161/363 (44%), Gaps = 52/363 (14%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+I+++++M + ++PN T+ + AC K + + + G D
Sbjct: 286 EAISVFNSM--KEYGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQRNGVQPDRITF 342
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDT-LCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
N+L+ + C G E+ + +F+E + + DV ++N++L + + G++ A ++ +MP
Sbjct: 343 NSLLAV-CSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 133 ER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+ +VVS+ST+I G+ + G ++ L F MR GI
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI--------------------A 441
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISG----KDIWTWNVMI 244
R ++T L+ +Y K G E++ + ++ KD+ T+N ++
Sbjct: 442 LDRVSYNT---------------LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGI 304
G G + +F + E +P +T+ +++ S GGL E F G+
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA-GL 545
Query: 305 QPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDACKVHGFVDMGEK 361
+ ++ Y ++D L + GLV AV LI+ MT E P+ V + +++DA +D
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Query: 362 IGN 364
N
Sbjct: 606 YSN 608
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 85/163 (52%), Gaps = 9/163 (5%)
Query: 208 VGTALVDMYAKCGCIEKSRALFESI----SGKDIWTWNVMICGLASHGLAKDALALFHKF 263
+ +A++ + G + ++ +FE+ G ++ ++ +I GL ++A+++F+
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 264 LSEGFIPVNVTFVGVLNACSMGGL-VSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAG 322
G P VT+ V++AC GG+ + ++F+ M G+QP+ + ++ + +R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-QRNGVQPDRITFNSLLAVCSRGG 353
Query: 323 LVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKI 362
L + A +L + MT +E D + TLLDA G +D+ +I
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 151/343 (44%), Gaps = 20/343 (5%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+KPN HT+T + + + ++ +++ G +V NALI+ YC+ G +
Sbjct: 354 IKPNIHTYTVLIDSLCSQCK--FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIM 144
+ V E L + T+N ++ G ++ + A V ++M ER DVV+++++I
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 145 GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
G ++G + S+M ++G+ P++ E + ++E
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDI----WTWNVMICGLASHGLAKDALALF 260
V + TAL+D Y K G ++++ + E + K+ T+N +I GL + G K+A L
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
Query: 261 HKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLAR 320
K + G P T +++ G F M+ G +P+ Y + R
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCR 649
Query: 321 AGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGE 360
G + +A ++ M V PD +++L + G+ D+G+
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSL-----IKGYGDLGQ 687
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 150/358 (41%), Gaps = 48/358 (13%)
Query: 56 QVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGV 115
QV+ +++ +++ N +++ YC+ G+ E+ + V + E L D T+ S++ G
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 116 VRNGEIRDAEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGL---------ECFSVM 162
+ ++ A KVF+EMP R+ V+++ +I G +++ + ECF +
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 163 R--------------------------EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHST 196
R E GI+PN E R +
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 197 IESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI----WTWNVMICGLASHGL 252
+ V AL++ Y K G IE + + E + + + T+N +I G +
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
K A+ + +K L +P VT+ +++ G R +LM D G+ P+ Y
Sbjct: 444 HK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND-RGLVPDQWTYT 501
Query: 313 CMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
M+D L ++ V+EA L +++ V P+ V++ L+D G VD + K++
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 162/372 (43%), Gaps = 16/372 (4%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+ +Y +L+R ++P+ T++ + K L SG ++ ++K+G+ DV +
Sbjct: 409 EAFGMYGQILKRG--MEPSIVTYSSLIDGFCK--CGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP- 132
L+ + G + + + + ++ +VV +NS++ G R +A KVF M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 133 ---ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
+ DV +++T++ + G LE+ L F M + G+ P+
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFES-ISGK---DIWTWNVMIC 245
G + ++ K + V ++ + KC IE + F + I GK DI T+N MIC
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
G S +A +F F P VT +++ + R F++M + G +
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE-KGSK 703
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKI 362
P YGC++D +++ ++ + L E M + P V ++ ++D G VD I
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 363 GNKLIQLDPMHD 374
++ I + D
Sbjct: 764 FHQAIDAKLLPD 775
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 16/264 (6%)
Query: 105 VVTWNSVLAGV-VRNGEI--RDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSV 161
+V+ N VL G+ V E+ R V D P +VV++ T+I G+ + G ++ + F V
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 162 MREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGC 221
M ++GI P+ G + S ++ V V ++ +D+Y K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 222 IEKS-----RALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFV 276
+ + R L + IS ++ T+ ++I GL G +A ++ + L G P VT+
Sbjct: 372 LATASVVYKRMLCQGIS-PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 277 GVLNA-CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM- 334
+++ C G L S Y +++ G P++ YG +VD L++ GL+ A+ M
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIK--MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 335 --TVEPDPVLWATLLDA-CKVHGF 355
++ + V++ +L+D C+++ F
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRF 512
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 54/277 (19%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G+Q+ + + + D+ V N +IHL +C ++ K E + D+VT+N+++
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 114 GVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRP 169
G + +AE++F+ + + V+ + +I +N ++ + FS+M EKG +P
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 170 NEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALF 229
N V G L+D ++K IE S LF
Sbjct: 705 N----------------------------------AVTYG-CLMDWFSKSVDIEGSFKLF 729
Query: 230 ESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNA-CSM 284
E + K I +++++I GL G +A +FH+ + +P V + ++ C +
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789
Query: 285 GGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARA 321
G LV Y +++ + G++P+ DLL RA
Sbjct: 790 GRLVEAALLYEHMLRN--GVKPD--------DLLQRA 816
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 163/380 (42%), Gaps = 56/380 (14%)
Query: 6 AKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLG 65
A AN E++ +S + + + ++FT +H + S L + V ++KLG
Sbjct: 80 ATANLRRYETVIYFSQKMELYG-ISHDLYSFTILIHCFCR--CSRLSFALSVLGKMMKLG 136
Query: 66 FARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAE 125
+ + +L+H +C ++F V + +VV +N+++ G+ +NGE+ A
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196
Query: 126 KVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXX 181
++ +EM ++ DVV+++T++ G +G D M ++ I P+
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD----------- 245
Query: 182 XXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI---- 237
V TAL+D++ K G +++++ L++ + +
Sbjct: 246 ------------------------VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL 297
T+N +I GL HG DA F S+G P VT+ +++ +V EG + F
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 298 MVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHG 354
M C G ++ Y ++ + G + A+ + M V PD + LL HG
Sbjct: 342 M-SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL-----HG 395
Query: 355 FVDMGEKIGNKLIQLDPMHD 374
GE I + L++ D M +
Sbjct: 396 LCVNGE-IESALVKFDDMRE 414
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 145/337 (43%), Gaps = 21/337 (6%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVES 89
+P+ TF LH + +G + +VK G+ +V V N LI C+ G +
Sbjct: 138 EPSIVTFGSLLHGFC--LVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMG 145
+ + E E+ L +DVVT+N++L G+ +G DA ++ +M +R DVV+++ +I
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
+V+ G L++ E + M + + PN + + S
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESIS----GKDIWTWNVMICGLASHGLAKDALALFH 261
V L+ + K +++ LF+ +S DI+T+N +I G G + AL +F
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFC 375
Query: 262 KFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC---YGIQPEMEHYGCMVDLL 318
+S P +T +L+ + G + F+ M + GI Y M+ L
Sbjct: 376 WMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA----YNIMIHGL 431
Query: 319 ARAGLVDEAVHLIETMTVE---PDPVLWATL-LDACK 351
+A V++A L + VE PD + + L CK
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 14/259 (5%)
Query: 22 MLR--RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHL 79
MLR +R + P+ TFT + K+ L +++ +++ + N++I+
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQG--NLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 80 YCECGSSVESFKRVFEEEEDTLC-SDVVTWNSVLAGVVRNGEIRDAEKVFDEMP----ER 134
C G ++ K+ F+ C +VVT+N++++G + + + K+F M
Sbjct: 291 LCMHGRLYDA-KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 135 DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVH 194
D+ +++T+I GY Q G L L+ F M + + P+ E
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 195 STIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS----GKDIWTWNVMICGLASH 250
+ + I + ++ K +EK+ LF + D T+ +MI GL +
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 251 GLAKDALALFHKFLSEGFI 269
G ++A L + EG I
Sbjct: 470 GPRREADELIRRMKEEGII 488
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 168/407 (41%), Gaps = 60/407 (14%)
Query: 15 SIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRN 74
+ + Y ML F+ N + + L + +G GV A ++K GFA +V+ N
Sbjct: 91 AFSFYRKMLETDTFI--NFVSLSGLLECYVQMRKTGFAFGVL--ALMLKRGFAFNVYNHN 146
Query: 75 ALIHLYC---ECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
L+ C ECG +V + E ++L DV ++N+V+ G E+ A ++ +EM
Sbjct: 147 ILLKGLCRNLECGKAVSLLR---EMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 132 PER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
+V+W +I + + G +++ + M+ G+ +
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEAD----------------- 246
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKD----IWTWNVM 243
+ V T+L+ + CG +++ +ALF+ + + T+N +
Sbjct: 247 ------------------LVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG 303
I G G K+A +F + G P T+ G+++ G E + NLM++
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE-KD 347
Query: 304 IQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGE 360
+P Y +++ L + GLV +AV ++E M PD + + LL G +D
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 361 KIGNKLIQLDPMHDGHYVQLAGI---YAKARKWEDVVRVRKLMIEKV 404
K+ +++ D + + K + + + L++EK+
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
N T+T + K + G+ V +L VF N L+ C+ GS +++
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL--QPSVFDYNCLLSSLCKEGSLDQAW- 549
Query: 92 RVFEE-EEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMGY 146
R+FEE + D DVV++N ++ G ++ G+I+ AE + M D+ ++S +I +
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Query: 147 VQNGLLEDGLECFSVMREKGIRPN 170
++ G L++ + F M + G P+
Sbjct: 610 LKLGYLDEAISFFDKMVDSGFEPD 633
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 131/282 (46%), Gaps = 9/282 (3%)
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
++KLGF + +L++ +C+ E+ V + +VV +N+V+ G+ +N +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 121 IRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
+ +A +VF M ++ D V+++T+I G +G D M ++ I PN
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK- 235
R ++ + V +L++ + GC+ ++ +F+ + K
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 236 ---DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK 292
D+ T+N +I G +D + LF + +G + T+ +++ G ++ +
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 293 RYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
+ FN MVDC G+ P++ Y ++D L G +++A+ ++E +
Sbjct: 380 KVFNRMVDC-GVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 114/277 (41%), Gaps = 47/277 (16%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
+R + PN FT + K L ++ +++ +VF N+LI+ +C G
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEG--NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 86 SVESFKRVFEEEEDTLC-SDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWS 140
++ K +F+ C DVVT+N+++ G ++ + D K+F EM + D +++
Sbjct: 305 LGDA-KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN 363
Query: 141 TMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESL 200
T+I GY Q G L + F+ M + G+ P+
Sbjct: 364 TLIHGYCQAGKLNVAQKVFNRMVDCGVSPD------------------------------ 393
Query: 201 KFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDA 256
+ L+D G IEK+ + E + DI T+N++I GL K+A
Sbjct: 394 -----IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 257 LALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKR 293
LF +G P + ++ +++ GL E +
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 48 ASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVT 107
A L +V +V G + D+ N L+ C G ++ V + ++ + D++T
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 108 WNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
+N ++ G+ R ++++A +F + + D +++ TMI G + GL + + M+
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Query: 164 EKGIRPNE 171
E G P+E
Sbjct: 492 EDGFMPSE 499
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 151/331 (45%), Gaps = 15/331 (4%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHA-CTKRAASGLGSGVQVHAHVVKLGFARDVF 71
SE++A+ M+ ++ +P+ T + ++ C K S + + +V+ GF D
Sbjct: 157 SEAVALVDRMVEMKQ--RPDLVTVSTLINGLCLKGRVS---EALVLIDRMVEYGFQPDEV 211
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
+++ C+ G+S + + EE + + VV ++ V+ + ++G DA +F+EM
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 132 PER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
+ DVV++S++I G +G +DG + M + I P+
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVM 243
+ +++ + + +L+D + K C+ ++ +F+ + K DI T++++
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG 303
I D + LF + S+G IP +T+ ++ G ++ K F MV G
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS-RG 450
Query: 304 IQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
+ P + YG ++D L G +++A+ + E M
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 11/292 (3%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
G ++ ++ DV +ALI ++ + G +E+ + E + D +T+NS++
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 114 GVVRNGEIRDAEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRP 169
G + + +A ++FD M E D+V++S +I Y + ++DG+ F + KG+ P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 170 NEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALF 229
N + + + S +V L+D G + K+ +F
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 230 ESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMG 285
E + I +N++I G+ + DA +LF +G P VT+ ++
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 286 GLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDL-LARAGLVDEAVHLIETMTV 336
G +SE F M + G P+ Y ++ L +GL+ +V LIE M V
Sbjct: 539 GSLSEADMLFRKMKE-DGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKV 588
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 54/284 (19%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+ +Y+ M+ R + P+ T+ + K L Q+ +V G D+
Sbjct: 333 EAKELYNEMITRG--IAPDTITYNSLIDGFCKENC--LHEANQMFDLMVSKGCEPDIVTY 388
Query: 74 NALIHLYCECGSSVESFKRVFEE-EEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+ LI+ YC+ V+ R+F E L + +T+N+++ G ++G++ A+++F EM
Sbjct: 389 SILINSYCK-AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 133 ER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
R VV++ ++ G NG L LE F M+
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ------------------------- 482
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGC--IEKSRALFESISGK----DIWTWNV 242
K R+T+ +G + ++ C ++ + +LF S+S K D+ T+NV
Sbjct: 483 ------------KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 243 MICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGG 286
MI GL G +A LF K +G P + T+ +L +GG
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY-NILIRAHLGG 573
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 130/300 (43%), Gaps = 20/300 (6%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
G DV ++LI C G + K + E + DVVT+++++ V+ G++ +A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 125 EKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+++++EM R D ++++++I G+ + L + + F +M KG P+
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----D 236
+ G + I S LV + + G + ++ LF+ + +
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 237 IWTWNVMICGLASHGLAKDALALFHKF----LSEGFIPVNVTFVGVLNACSMGGLVSEGK 292
+ T+ +++ GL +G AL +F K ++ G N+ G+ NA V +
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK----VDDAW 510
Query: 293 RYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDA 349
F + D G++P++ Y M+ L + G + EA L M + PD + L+ A
Sbjct: 511 SLFCSLSD-KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 137/336 (40%), Gaps = 52/336 (15%)
Query: 29 VKPNQHTFTFALHA-CTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSV 87
++ + +T T ++ C K+ L V KLG+ D + L++ +C G
Sbjct: 101 IEHDMYTMTIMINCYCRKKK---LLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMI 143
E+ V E D+VT ++++ G+ G + +A + D M E D V++ ++
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 144 MGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFR 203
++G L+ F M E+ I+
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKA---------------------------------- 243
Query: 204 ITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDALAL 259
+V + ++D K G + + +LF + K D+ T++ +I GL + G D +
Sbjct: 244 -SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 260 FHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLA 319
+ + IP VTF +++ G + E K +N M+ GI P+ Y ++D
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFC 361
Query: 320 RAGLVDEAVHLIETMT---VEPDPVLWATLLDA-CK 351
+ + EA + + M EPD V ++ L+++ CK
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 36/341 (10%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEE-EDTLCSDVVTWNSVLAGVVRNGEIRD 123
G A DVF LI+ + + G+ ++ +F+E E+ L +V+ +N +L G R+GEI
Sbjct: 622 GIAPDVFSYGVLINGFSKLGN-MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 124 AEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
A+++ DEM + + V++ T+I GY ++G L + F M+ KG+ P+
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE-KSRAL-------FES 231
E + T + T P AL++ K G E K+ L F+
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPF-NALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 232 ISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEG 291
+ T+N+MI L G + A LFH+ + +P +T+ +LN G +E
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACK 351
F+ + GI+P+ Y +++ + G+ +A+ L++ M + + D CK
Sbjct: 860 FPVFDEAI-AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK------NAVDDGCK 912
Query: 352 ---------VHGFVDMG-----EKIGNKLIQLDPMHDGHYV 378
+ GF +G EK+ +++L + D V
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 152/352 (43%), Gaps = 65/352 (18%)
Query: 48 ASGLGSGVQVHAHVVKLGFARDVFVR------------NALIHLY---------CECGSS 86
ASGL Q +A +++ G+ R+ VR N +I Y C G
Sbjct: 375 ASGLIPQAQAYASLIE-GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 87 VESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTM 142
++ V E +VV + +++ ++N DA +V EM E+ D+ ++++
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF 202
I+G + +++ M E G++PN G F+ IE+ +F
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTY---------------GAFISGYIEASEF 538
Query: 203 RIT------------VP---VGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVM 243
+P + T L++ Y K G + ++ + + S+ + D T+ V+
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYG 303
+ GL + DA +F + +G P ++ ++N S G + + F+ MV+ G
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EG 657
Query: 304 IQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDA-CK 351
+ P + Y ++ R+G +++A L++ M+V+ P+ V + T++D CK
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
N+ T+T + K + ++ + + G DV V +LI C G+ +F
Sbjct: 293 NKVTYTLLMELSVKNGK--MSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDV----VSWSTMIMGYV 147
E E L T+ +++ GV + GE+ AE + +EM + V V ++T+I GY
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYC 410
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXX-XXXXXXXXECGRFVHSTIESLKFRITV 206
+ G++++ + VM +KG + + E +++ +E +++
Sbjct: 411 RKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG-GVKLST 469
Query: 207 PVGTALVDMYAKCGCIEKSRALFESISGKDIW----TWNVMICGLASHGLAKDALALFHK 262
T L+D+Y K G +E+++ LF +S K + T+NVMI G K+A L
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 263 FLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAG 322
+ G P + T+ +++ + V E R F+ M G+ Y M+ L++AG
Sbjct: 530 MEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM-GLKGLDQNSVTYTVMISGLSKAG 588
Query: 323 LVDEAVHLIETM 334
DEA L + M
Sbjct: 589 KSDEAFGLYDEM 600
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 153/343 (44%), Gaps = 19/343 (5%)
Query: 65 GFARDVFVRNALIHLYCECG--SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIR 122
G + + N +I+ Y + S VE +V ++ D + + VT+ ++ V+NG++
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK--DGVVYNKVTYTLLMELSVKNGKMS 311
Query: 123 DAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXX 178
DAEK+FDEM ER DV ++++I + G ++ F + EKG+ P+
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 179 XXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK--- 235
+ + ++S IT V L+D Y + G ++++ +++ + K
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 236 -DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRY 294
D++T N + +A + + G V++ +++ G V E KR
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 295 FNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHL---IETMTVEPDPVLWATLLDACK 351
F + + G+QP Y M+ + G + EA L +E ++PD + +L+
Sbjct: 492 F-VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 352 VHGFVDMGEKIGNK--LIQLDPMHDGHYVQLAGIYAKARKWED 392
+ VD ++ ++ L LD + V ++G+ +KA K ++
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL-SKAGKSDE 592
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 11/216 (5%)
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE-CGRFVHSTIESLKFRI 204
YV NG+ E+GL F M +KG+ +E + C ++S +I
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDS-GVKI 222
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDI----WTWNVMICGLASHGLAKDALALF 260
TV T +V+ + G +EKS+ L + S K I +T+N +I +
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 261 HKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLAR 320
+G + VT+ ++ G +S+ ++ F+ M + GI+ ++ Y ++ R
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE-RGIESDVHVYTSLISWNCR 341
Query: 321 AGLVDEAVHLIETMT---VEPDPVLWATLLDA-CKV 352
G + A L + +T + P + L+D CKV
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKV 377
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 174/404 (43%), Gaps = 31/404 (7%)
Query: 13 SESIAIYSAMLR--RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDV 70
S IA +LR R+R + PN+ T+ ++ + + S Q+ ++ G + +
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS--QLLNEMLSFGLSPNH 373
Query: 71 FVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDE 130
NALI + G+ E+ K + E L V++ +L G+ +N E A +
Sbjct: 374 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 433
Query: 131 MPERDV----VSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXX 186
M V ++++ MI G +NG L++ + + M + GI P+
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD-----IVTYSALINGF 488
Query: 187 XECGRF-VHSTIESLKFRITV-PVGTALVDMYAKC---GCIEKSRALFESI----SGKDI 237
+ GRF I +R+ + P G + C GC++++ ++E++ +D
Sbjct: 489 CKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDH 548
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL 297
+T+NV++ L G +A S+G +P V+F ++N G EG + F++
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG---EGLKAFSV 605
Query: 298 M--VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEP---DPVLWATLLDACKV 352
+ G P YG ++ L + G + EA ++++ P D V++ TLL A
Sbjct: 606 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Query: 353 HGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRV 396
G + + +++Q + D Y + I RK + V+ +
Sbjct: 666 SGNLAKAVSLFGEMVQRSILPDS-YTYTSLISGLCRKGKTVIAI 708
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 53/339 (15%)
Query: 34 HTFTFALHACTKRAASGLGSGVQVHA-----HVVKLGFARDVFVRNALIHLYCECGSSVE 88
+ F +++ C S + SG V ++K DV N LI++ C GS +
Sbjct: 192 YGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEK 251
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIM 144
S + + E+ +VT+N+VL + G + A ++ D M + DV +++ +I
Sbjct: 252 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 311
Query: 145 GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
++ + G MR++ I PNE ++ I
Sbjct: 312 DLCRSNRIAKGYLLLRDMRKRMIHPNEVT-------------------YNTLINGFSNEG 352
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL 264
V + + L++ G +S + T+N +I G S G K+AL +F+
Sbjct: 353 KVLIASQLLNEMLSFG-----------LSPNHV-TFNALIDGHISEGNFKEALKMFYMME 400
Query: 265 SEGFIPVNVTFVGVLNACSMGGLVSEGK----RYFNLMVDCYGIQPEMEHYGCMVDLLAR 320
++G P V++ GVL + GL + R F + + G+ Y M+D L +
Sbjct: 401 AKGLTPSEVSY-GVL----LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 321 AGLVDEAVHLIETMT---VEPDPVLWATLLDA-CKVHGF 355
G +DEAV L+ M+ ++PD V ++ L++ CKV F
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 127/320 (39%), Gaps = 20/320 (6%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQ---VHAHVVKLGFARDVFVRNALIHLYCECGS 85
+ PN +F C G G++ V + K+G F +L+ C+ G
Sbjct: 579 ILPNTVSFD-----CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVSWSTMIMG 145
E+ K + D V +N++L + ++G + A +F EM +R ++ S
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693
Query: 146 YVQNGLLEDGLECFSVMREK------GIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIES 199
+ +GL G +++ K + PN+ + G + +++
Sbjct: 694 LI-SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 752
Query: 200 LKFRITVPVGTALVDMYAKCGCIEKSRALFESI----SGKDIWTWNVMICGLASHGLAKD 255
L + A++D Y++ G IEK+ L + G ++ T+N+++ G +
Sbjct: 753 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 812
Query: 256 ALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMV 315
+ L+ + G +P +T ++ ++ G + + C G++ + + ++
Sbjct: 813 SFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI-CRGVEVDRYTFNMLI 871
Query: 316 DLLARAGLVDEAVHLIETMT 335
G ++ A L++ MT
Sbjct: 872 SKCCANGEINWAFDLVKVMT 891
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 138/342 (40%), Gaps = 61/342 (17%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+ PN ++ ++ C + L ++++ ++ G RD F N L+ C+ G E
Sbjct: 509 LSPNGIIYSTLIYNCCRMGC--LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE----RDVVSWSTMIM 144
+ + + D + + V+++ ++ G +GE A VFDEM + ++ +++
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626
Query: 145 GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
G + G L + EK ++ +H+ ++
Sbjct: 627 GLCKGGHLREA--------EKFLKS-----------------------LHAVPAAVD--- 652
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDI----WTWNVMICGLASHGLAKDALALF 260
TV T L M K G + K+ +LF + + I +T+ +I GL G K +A+
Sbjct: 653 TVMYNTLLTAM-CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTVIAIL 709
Query: 261 HKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK----RYFNLMVDCYGIQPEMEHYGCMVD 316
F E NV V+ C + G+ G+ YF +D G P++ M+D
Sbjct: 710 --FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 317 LLARAGLVDEAVHLIETMTVE---PDPVLWATLLDACKVHGF 355
+R G +++ L+ M + P+ + LL HG+
Sbjct: 768 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL-----HGY 804
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 147/333 (44%), Gaps = 61/333 (18%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
R R + PN+ T+T + +++ + +V + GF+ V NALI+ +C G
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGY--MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWS 140
++ + + +E L DVV++++VL+G R+ ++ +A +V EM E+ D +++S
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 141 TMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESL 200
++I G+ + ++ + + M G+ P+E F +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDE--------------------FTY------ 523
Query: 201 KFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDA 256
TAL++ Y G +EK+ L + K D+ T++V+I GL ++A
Sbjct: 524 ---------TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 257 LALFHKFLSEGFIPVNVTFVGVLNACS---------------MGGLVSEGKRYFNLMVDC 301
L K E +P +VT+ ++ CS M G+++E + F M+
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG- 633
Query: 302 YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
+P+ Y M+ RAG + +A L + M
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 130/301 (43%), Gaps = 39/301 (12%)
Query: 57 VHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVV 116
+HA +++ G V +LIH C+ G+ + + + + LC + T+ +++ G
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 117 RNGEIRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEX 172
+ G + +A +V EM + VV+++ +I G+ G +ED + M+EKG+ P+
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 173 XXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESI 232
+ST+ S F + V AL R + E
Sbjct: 452 S--------------------YSTVLS-GFCRSYDVDEAL----------RVKREMVEKG 480
Query: 233 SGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK 292
D T++ +I G K+A L+ + L G P T+ ++NA M G + +
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 293 RYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDA 349
+ N MV+ G+ P++ Y +++ L + EA L+ + E P V + TL++
Sbjct: 541 QLHNEMVE-KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 350 C 350
C
Sbjct: 600 C 600
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 134/317 (42%), Gaps = 15/317 (4%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEE-EDTLCSDVVTWNSVLAGVVRNGEIRD 123
GF V NA++ ++ + VF+E E + +V T+N ++ G G I
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 124 AEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
A +FD+M + +VV+++T+I GY + ++DG + M KG+ PN
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESI----SGK 235
+ FV + + + + L+ Y K G ++ + +
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 236 DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF 295
+ T+ +I + G A+ + G P T+ +++ S G ++E R
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 296 NLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDA-CK 351
M D G P + Y +++ G +++A+ ++E M + PD V ++T+L C+
Sbjct: 404 REMND-NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 352 VHGFVDMGEKIGNKLIQ 368
+ VD ++ ++++
Sbjct: 463 SYD-VDEALRVKREMVE 478
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 147/345 (42%), Gaps = 18/345 (5%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
+R V PN T+ + +R L V++ +++ G DV N LI+ C+
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGE--LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 301
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDE------MPERDVVSW 139
E+ + + + L D T+N+++AG + G ++ AE++ + +P D ++
Sbjct: 302 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP--DQFTY 359
Query: 140 STMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIES 199
++I G G L F+ KGI+PN + + +
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 200 LKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKD 255
V LV+ K GC+ + L + + K DI+T+N++I G ++ ++
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 256 ALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMV 315
AL + L G P T+ +LN + + MV+ G P + + ++
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE-KGCAPNLFTFNILL 538
Query: 316 DLLARAGLVDEAVHLIETM---TVEPDPVLWATLLDACKVHGFVD 357
+ L R +DEA+ L+E M +V PD V + TL+D +G +D
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 145/331 (43%), Gaps = 45/331 (13%)
Query: 100 TLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVV----SWSTMIMGYVQNGLLEDG 155
+LC + T+N +L + + G++++ EK+ D++ +R V+ +++ I G Q G L+
Sbjct: 213 SLC--LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 156 LECFSVMREKGIRP-----NEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGT 210
+ + E+G +P N G+ V+ +E +
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN----- 325
Query: 211 ALVDMYAKCGCIEKSRALFESISGK--------DIWTWNVMICGLASHGLAKDALALFHK 262
L+ Y K G ++ L E I G D +T+ +I GL G ALALF++
Sbjct: 326 TLIAGYCKGGMVQ----LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 263 FLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAG 322
L +G P + + ++ S G++ E + N M + G+ PE++ + +V+ L + G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE-KGLIPEVQTFNILVNGLCKMG 440
Query: 323 LVDEAVHLIETMTVE---PDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG---- 375
V +A L++ M + PD + L +HG+ K+ N L LD M D
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNIL-----IHGY-STQLKMENALEILDVMLDNGVDP 494
Query: 376 ---HYVQLAGIYAKARKWEDVVRVRKLMIEK 403
Y L K K+EDV+ K M+EK
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 117/298 (39%), Gaps = 18/298 (6%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYC---ECGSSV 87
P TF ++ K G+ V + K G+ D+F N LIH Y + +++
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGL-VKVMISK-GYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 88 ESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMI 143
E + + D DV T+NS+L G+ + + D + + M E+ ++ +++ ++
Sbjct: 482 EILDVMLDNGVD---PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 144 MGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIE-SLKF 202
+ L++ L M+ K + P+ + + +E + K
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 203 RITVPVGTALVDMYAKCGCIEKSRALFESIS----GKDIWTWNVMICGLASHGLAKDALA 258
+ P ++ + + + + LF+ + G D +T+ +M+ G G
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYK 658
Query: 259 LFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVD 316
+ + GFIP T V+N + V E + MV G+ PE + C VD
Sbjct: 659 FLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ-KGLVPEAVNTICDVD 715
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 46/303 (15%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLA 113
+ V ++K G+ DV ++LI+ +C+ ++ V + EE DVV +N+++
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 114 GVVRNGEIRDAEKVFDEMPER-----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIR 168
G + G + DA ++FD M ER D V++++++ G +G D M + I
Sbjct: 183 GSCKIGLVNDAVELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 169 PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL 228
PN V TA++D++ K G ++ L
Sbjct: 242 PN-----------------------------------VITFTAVIDVFVKEGKFSEAMKL 266
Query: 229 FESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSM 284
+E ++ + D++T+N +I GL HG +A + +++G +P VT+ ++N
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Query: 285 GGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWA 344
V EG + F M G+ + Y ++ +AG D A + M P+ ++
Sbjct: 327 SKRVDEGTKLFREMAQ-RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYS 385
Query: 345 TLL 347
LL
Sbjct: 386 ILL 388
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 144/352 (40%), Gaps = 55/352 (15%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECG---SSVESFKRVFEEEEDTLCSDVVTWNS 110
+ + + + ++GF DV + N +I C+ G +VE F R+ E D + +D VT+NS
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM---ERDGVRADAVTYNS 214
Query: 111 VLAGVVRNGEIRDAEKVFDEMPERD----VVSWSTMIMGYVQNGLLEDGLECFSVMREKG 166
++AG+ +G DA ++ +M RD V++++ +I +V+ G + ++ + M +
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 167 IRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSR 226
+ P+ +S I L V ++D+ GC+
Sbjct: 275 VDPDVFTY-------------------NSLINGLCMHGRVDEAKQMLDLMVTKGCLP--- 312
Query: 227 ALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGG 286
D+ T+N +I G + LF + G + +T+ ++ G
Sbjct: 313 ---------DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 287 LVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLW 343
+ F+ M +P + Y ++ L V++A+ L E M +E D +
Sbjct: 364 RPDAAQEIFSRM----DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 419
Query: 344 ATLLDA-CK---VHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWE 391
++ CK V D+ + K ++ D + Y + + + R+W+
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV---SYTTMISGFCRKRQWD 468
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 102/264 (38%), Gaps = 44/264 (16%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
SE++ +Y M RR V P+ T+ ++ + Q+ +V G DV
Sbjct: 261 SEAMKLYEEMTRR--CVDPDVFTYNSLINGLCMHGR--VDEAKQMLDLMVTKGCLPDVVT 316
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
N LI+ +C+ E K E + L D +T+N+++ G + G A+++F M
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376
Query: 133 ER-DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
R ++ ++S ++ G N +E L F M++ I
Sbjct: 377 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI------------------------ 412
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGL 247
+ + ++ K G +E + LF S+S K D+ ++ MI G
Sbjct: 413 -----------ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 248 ASHGLAKDALALFHKFLSEGFIPV 271
+ L+ K +G +P+
Sbjct: 462 CRKRQWDKSDLLYRKMQEDGLLPL 485
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 160/365 (43%), Gaps = 20/365 (5%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVES 89
+P T+T + A G+ +++ ++ G D+F N +I C+ G +
Sbjct: 225 QPTVITYTILIEATMLEG--GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKV----FDEMPERDVVSWSTMIMG 145
F+ V E DV+++N +L ++ G+ + EK+ F E + +VV++S +I
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECG-RFVHSTIESLKFRI 204
++G +E+ + +M+EKG+ P+ + F+ + I
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESIS----GKDIWTWNVMICGLASHGLAKDALALF 260
V T L + K G +++ +F + + ++N M L S G AL +
Sbjct: 403 IVNYNTVLATL-CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 261 HKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ--PEMEHYGCMVDLL 318
+ +S G P +T+ +++ G+V E F L+VD + P + Y ++
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEA---FELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 319 ARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG 375
+A +++A++++E+M P+ + L++ G+ ++ N L+++D + +
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY 578
Query: 376 HYVQL 380
+ +L
Sbjct: 579 SFKRL 583
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 210 TALVDMYAKCGCIEKSRALFESISGKDIW----TWNVMICGLASHGLAKDALALFHKFLS 265
AL++ + K I+ + + + + KD T+N+MI L S G AL + ++ LS
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
+ P +T+ ++ A + G V E + + M+ G++P+M Y ++ + + G+VD
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS-RGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 326 EAVHLIETMTV---EPDPVLWATLLDACKVHGFVDMGEKIGNKLI--QLDPMHDGHYVQL 380
A ++ + + EPD + + LL A G + GEK+ K+ + DP + Y L
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP-NVVTYSIL 339
Query: 381 AGIYAKARKWEDVVRVRKLMIEK 403
+ K E+ + + KLM EK
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEK 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 141/349 (40%), Gaps = 15/349 (4%)
Query: 66 FARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAE 125
F+ D N +I C G + K + + D V+T+ ++ + G + +A
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 126 KVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXX 181
K+ DEM R D+ +++T+I G + G+++ E + KG P+
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 182 XXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DI 237
E G + + + S K V + L+ + G IE++ L + + K D
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL 297
++++ +I G A+ +S+G +P V + VL G + F
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 298 MVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHG 354
+ + G P Y M L +G A+H+I M ++PD + + +++ G
Sbjct: 429 LGEV-GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Query: 355 FVDMGEK--IGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMI 401
VD + + + + P + + L G + KA + ED + V + M+
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLG-FCKAHRIEDAINVLESMV 535
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 10/279 (3%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
G DVF N LI C G ++ + + + E + D+V +N+++ V+ G++ +A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 125 EKVFDEMPER-----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
EK++DEM + DVV+++T+I G+ + +E+G+E F M ++G+ N
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK---- 235
+ + V + S + L+D G +E + +FE + +
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 236 DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF 295
DI T+ MI L G +D LF +G P VT+ +++ GL E F
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 296 NLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
M + G P Y ++ R G + LI+ M
Sbjct: 520 VEMKE-DGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 137/315 (43%), Gaps = 16/315 (5%)
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNS 110
+ V + +V++G+ D L+H + + E+ V D+VT+ +
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 111 VLAGVVRNGEIRDAEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG 166
V+ G+ + GE A + ++M E DVV ++T+I G + ++D + F+ M KG
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 167 IRPNEXXXXXXXXXXXXXXX-XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKS 225
I+P+ + R + +E + AL+D + K G + ++
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NINPDLVFFNALIDAFVKEGKLVEA 339
Query: 226 RALF-ESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLN 280
L+ E + K D+ +N +I G + ++ + +F + G + VT+ +++
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 281 ACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VE 337
+ F MV G+ P++ Y ++D L G V+ A+ + E M ++
Sbjct: 400 GFFQARDCDNAQMVFKQMVS-DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 338 PDPVLWATLLDA-CK 351
D V + T+++A CK
Sbjct: 459 LDIVTYTTMIEALCK 473
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 147/353 (41%), Gaps = 20/353 (5%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
++I ++ M++ R F P+ F+ L A K L + + + LG + +++
Sbjct: 58 DAIGLFGDMVKSRPF--PSIVEFSKLLSAIAKMNKFDLV--ISLGEQMQNLGISHNLYTY 113
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
+ I+ +C + + + + +VT NS+L G I +A + D+M E
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 134 R----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
D V+++T++ G Q+ + + M KG +P+ +
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMIC 245
+ + +E K V + ++D K ++ + LF + K D++T+N +I
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
L ++G DA L L + P V F +++A G + E ++ ++ MV
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGF 355
P++ Y ++ + V+E + + M+ + + V + TL +HGF
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL-----IHGF 401
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 184/451 (40%), Gaps = 67/451 (14%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVES 89
KPN FT + K+ + + ++ +V+ G+ +V+ ALI C+ G + ++
Sbjct: 284 KPNLINFTSLIDGLCKKGS--IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 90 FKRVFEE--EEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMI 143
F R+F + DT +V T+ S++ G + ++ AE +F M E+ +V +++T+I
Sbjct: 342 F-RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 144 MGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFR 203
G+ + G E ++M ++G PN ++ I+SL +
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYT-------------------YNAAIDSLCKK 441
Query: 204 ITVPVGTALVDMYAKCGC-------------------IEKSRALFESISGK----DIWTW 240
P L++ CG I ++ A F ++ D+
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 501
Query: 241 NVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVD 300
N++I K++ LF +S G IP T+ +++ G + +YF+ M
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 301 CYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATL-LDACKVHGFV 356
+G P+ YG ++ L + +VDEA L E M + P V TL + CK +
Sbjct: 562 -HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRN--- 617
Query: 357 DMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVEL 416
N +I L+P+ +++ + E V V L +K+ +K + V L
Sbjct: 618 ----DSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTL 673
Query: 417 EGGIHHFVAGDKDHDCSSDIYRMLETIGQGI 447
F + ++ + + E I +G+
Sbjct: 674 AA----FTTACSESGKNNLVTDLTERISRGV 700
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 115/328 (35%), Gaps = 49/328 (14%)
Query: 72 VRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
V ++ + E G E+ V + + L +T N VL V G I AE VFDEM
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 132 PERDVV----SWSTMIMG----------------YVQNGLLEDGLEC------------- 158
R VV S+ M++G +Q G + D C
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 159 ------FSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTAL 212
F M + G +PN + + + ++ V TAL
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 213 VDMYAKCGCIEKSRALFESISGKDIWTWNV-----MICGLASHGLAKDALALFHKFLSEG 267
+D K G EK+ LF + D + NV MI G A LF + +G
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
P T+ ++N G NLM D G P + Y +D L + EA
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD-EGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 328 VHLIE---TMTVEPDPVLWATLL-DACK 351
L+ + +E D V + L+ + CK
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCK 475
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 10/187 (5%)
Query: 212 LVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
++++ + G IE + +F+ +S + D ++ +M+ G G ++A + G
Sbjct: 188 VLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRG 247
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
FIP N T +L A GLV+ YF M+D G +P + ++ ++D L + G + +A
Sbjct: 248 FIPDNATCTLILTALCENGLVNRAIWYFRKMID-LGFKPNLINFTSLIDGLCKKGSIKQA 306
Query: 328 VHLIETMTV---EPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDG--HYVQLAG 382
++E M +P+ L+D G+ + ++ KL++ D Y + G
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 366
Query: 383 IYAKARK 389
Y K K
Sbjct: 367 GYCKEDK 373
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 158/360 (43%), Gaps = 31/360 (8%)
Query: 65 GFARDVFVRNALIHLYCECGS---SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEI 121
GF D + N L++ C+ G ++E + +E D DV T+NSV++G+ + GE+
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD---PDVYTYNSVISGLCKLGEV 346
Query: 122 RDAEKVFDEMPERD----VVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXX 177
++A +V D+M RD V+++T+I + +E+ E V+ KGI P+
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD---VCTF 403
Query: 178 XXXXXXXXXXECGRFVHSTIESLKFRITVP---VGTALVDMYAKCGCIEKSRALFESIS- 233
R E ++ + P L+D G ++++ + + +
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 234 ---GKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSE 290
+ + T+N +I G ++A +F + G +VT+ +++ V +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 291 GKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLL 347
+ + M+ G +P+ Y ++ R G + +A +++ MT EPD V + TL+
Sbjct: 524 AAQLMDQMI-MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 348 DACKVHGFVDMGEK----IGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEK 403
G V++ K I K I L P +Q G++ K RK + + + + M+E+
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ--GLFRK-RKTTEAINLFREMLEQ 639
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 141/316 (44%), Gaps = 13/316 (4%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
P+Q+TF ++ K A + +++ +++ G+ DV+ N++I C+ G E+
Sbjct: 293 PDQYTFNTLVNGLCK--AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 91 KRVFEEEEDTLCS-DVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMG 145
+ V ++ CS + VT+N++++ + + ++ +A ++ + + DV +++++I G
Sbjct: 351 E-VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
+E F MR KG P+E + + +E +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESIS----GKDIWTWNVMICGLASHGLAKDALALFH 261
V L+D + K ++ +F+ + ++ T+N +I GL +DA L
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 262 KFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARA 321
+ + EG P T+ +L GG + + M G +P++ YG ++ L +A
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS-NGCEPDIVTYGTLISGLCKA 588
Query: 322 GLVDEAVHLIETMTVE 337
G V+ A L+ ++ ++
Sbjct: 589 GRVEVASKLLRSIQMK 604
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 115/280 (41%), Gaps = 17/280 (6%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
G D F N LI C G E+ + + E V+T+N+++ G + + R+A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 125 EKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
E++FDEM R+ V+++T+I G ++ +ED + M +G +P++
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI--- 237
+ + + S + L+ K G +E + L SI K I
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 238 -WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVN-----VTFVGVLNACSMGGLVSEG 291
+N +I GL +A+ LF + L + P + + F G+ C+ GG + E
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL---CNGGGPIREA 666
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLI 331
+ +++ G PE + + L + + V L+
Sbjct: 667 VDFLVELLE-KGFVPEFSSLYMLAEGLLTLSMEETLVKLV 705
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 106/266 (39%), Gaps = 13/266 (4%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVV----SWSTMIMGYVQNGLLEDGLECF 159
DV T+N ++ + R ++R A + ++MP +V +++T++ GY++ G L+ L
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 160 SVMREKGIR-PNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAK 218
M E G N + F+ F LV+ K
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 219 CG----CIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVT 274
G IE + + D++T+N +I GL G K+A+ + + ++ P VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 275 FVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
+ +++ V E ++ GI P++ + ++ L A+ L E M
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTS-KGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 335 T---VEPDPVLWATLLDACKVHGFVD 357
EPD + L+D+ G +D
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLD 452
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 137/337 (40%), Gaps = 45/337 (13%)
Query: 76 LIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER- 134
L L +C + + E E +C +V ++N V+ V + G I++A + M +
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 135 ---DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
DV+S+ST++ GY + G L+ + VM+ KG++PN
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI----WTWNVMICGL 247
S + V T L+D + K G I + F + +DI T+ +I G
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC------ 301
G +A LFH+ +G P +VTF ++N G + + R N M+
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 302 ----------------------------YGIQPEMEHYGCMVDLLARAGLVDEAVHLI-- 331
G+QP + Y +V+ L ++G ++EAV L+
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 332 -ETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
E + D V + TL+DA G +D ++I +++
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 129/299 (43%), Gaps = 11/299 (3%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
+R+ +KPN + + + + L + + +++ G D V LI +C+ G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCR--ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM----PERDVVSWS 140
+ K +E + DV+T+ ++++G + G++ +A K+F EM E D V+++
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 141 TMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESL 200
+I GY + G ++D + M + G PN + + + +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 201 KFRITVPVGTALVDMYAKCGCIEKSRAL---FESIS-GKDIWTWNVMICGLASHGLAKDA 256
+ + ++V+ K G IE++ L FE+ D T+ ++ G A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 257 LALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMV 315
+ + L +G P VTF ++N + G++ +G++ N M+ GI P + +V
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLV 603
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 16/249 (6%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
PN T+T + K L S ++ + K+G ++F N++++ C+ G+ E+
Sbjct: 454 PNVVTYTTLIDGLCKEG--DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM----PERDVVSWSTMIMGY 146
K V E E L +D VT+ +++ ++GE+ A+++ EM + +V+++ ++ G+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 147 VQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITV 206
+G+LEDG + + M KGI PN + ++ + S R
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS---RGVG 628
Query: 207 PVGTA---LVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDALAL 259
P G LV + K ++++ LF+ + GK + T++V+I G +A +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 260 FHKFLSEGF 268
F + EG
Sbjct: 689 FDQMRREGL 697
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 137/337 (40%), Gaps = 45/337 (13%)
Query: 76 LIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER- 134
L L +C + + E E +C +V ++N V+ V + G I++A + M +
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 135 ---DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGR 191
DV+S+ST++ GY + G L+ + VM+ KG++PN
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 192 FVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI----WTWNVMICGL 247
S + V T L+D + K G I + F + +DI T+ +I G
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 248 ASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDC------ 301
G +A LFH+ +G P +VTF ++N G + + R N M+
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 302 ----------------------------YGIQPEMEHYGCMVDLLARAGLVDEAVHLI-- 331
G+QP + Y +V+ L ++G ++EAV L+
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 332 -ETMTVEPDPVLWATLLDACKVHGFVDMGEKIGNKLI 367
E + D V + TL+DA G +D ++I +++
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 129/299 (43%), Gaps = 11/299 (3%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
+R+ +KPN + + + + L + + +++ G D V LI +C+ G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCR--ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM----PERDVVSWS 140
+ K +E + DV+T+ ++++G + G++ +A K+F EM E D V+++
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 141 TMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESL 200
+I GY + G ++D + M + G PN + + + +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 201 KFRITVPVGTALVDMYAKCGCIEKSRAL---FESIS-GKDIWTWNVMICGLASHGLAKDA 256
+ + ++V+ K G IE++ L FE+ D T+ ++ G A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 257 LALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMV 315
+ + L +G P VTF ++N + G++ +G++ N M+ GI P + +V
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-AKGIAPNATTFNSLV 603
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 16/249 (6%)
Query: 31 PNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
PN T+T + K L S ++ + K+G ++F N++++ C+ G+ E+
Sbjct: 454 PNVVTYTTLIDGLCKEG--DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM----PERDVVSWSTMIMGY 146
K V E E L +D VT+ +++ ++GE+ A+++ EM + +V+++ ++ G+
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 147 VQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITV 206
+G+LEDG + + M KGI PN + ++ + S R
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS---RGVG 628
Query: 207 PVGTA---LVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDALAL 259
P G LV + K ++++ LF+ + GK + T++V+I G +A +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 260 FHKFLSEGF 268
F + EG
Sbjct: 689 FDQMRREGL 697
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 14/267 (5%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
S++ + S M+ R+ + PN TF + A K L +++ ++K D+F
Sbjct: 312 SDASRLLSDMIERK--INPNVVTFNALIDAFVKEGK--LVEAEKLYDEMIKRSIDPDIFT 367
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLC-SDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
++LI+ +C ++ K +FE C +VVT+N+++ G + I + ++F EM
Sbjct: 368 YSSLINGFC-MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 132 PER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
+R + V+++T+I G+ Q ++ F M G+ PN
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVM 243
E V ++ K T+ +++ K G +E LF S+S K D+ +N M
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIP 270
I G GL ++A ALF K +G +P
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 151/378 (39%), Gaps = 36/378 (9%)
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNS 110
+ V + +V++G+ D LIH + E+ V + ++VT+
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 111 VLAGVVRNGEIRDAEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKG 166
V+ G+ + G+I A + ++M E +VV +ST+I + +D L F+ M KG
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 167 IRPNEXXXXXXXXXXXXXXX-XECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKS 225
+RPN + R + IE K V AL+D + K G + ++
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKEGKLVEA 349
Query: 226 RALFESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNA 281
L++ + + DI+T++ +I G H +A +F +S+ P VT+ ++N
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 282 CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEP 338
+ EG F M G+ Y ++ +A D A + + M V P
Sbjct: 410 FCKAKRIDEGVELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 339 DPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRK 398
+ + + TLLD +G K+ ++ + Y + K E +
Sbjct: 469 NIMTYNTLLDGLCKNG------KLEKAMVVFE-------------YLQRSKMEPTIYTYN 509
Query: 399 LMIE---KVSKKVAGWSL 413
+MIE K K GW L
Sbjct: 510 IMIEGMCKAGKVEDGWDL 527
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/409 (20%), Positives = 171/409 (41%), Gaps = 35/409 (8%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
++I ++ M++ R P+ F L A K L + + + +LG + +++
Sbjct: 68 DAIGLFGGMVKSRPL--PSIFEFNKLLSAIAKMKKFDLV--ISLGEKMQRLGISHNLYTY 123
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N LI+ +C + + + + +VT +S+L G I DA + D+M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 134 R----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
D ++++T+I G + + + M ++G +PN +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMIC 245
+ + +E+ K V + + ++D K + + LF + K ++ T++ +I
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
L ++ DA L + P VTF +++A G + E ++ ++ M+ I
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK-RSID 362
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDA-CK-------VHG 354
P++ Y +++ +DEA H+ E M + P+ V + TL++ CK V
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 355 FVDMGEK--IGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMI 401
F +M ++ +GN + Y L + +AR ++ V K M+
Sbjct: 423 FREMSQRGLVGNTVT---------YTTLIHGFFQARDCDNAQMVFKQMV 462
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 140/321 (43%), Gaps = 47/321 (14%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
G +V ++LI C ++ + + + E + +VVT+N+++ V+ G++ +A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 125 EKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
EK++DEM +R D+ ++S++I G+ + L++ F +M K PN
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN---------- 399
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----D 236
V L++ + K I++ LF +S + +
Sbjct: 400 -------------------------VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
T+ +I G +A +F + +S+G P +T+ +L+ G + + F
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVH 353
+ ++P + Y M++ + +AG V++ L +++ V+PD +++ T++
Sbjct: 495 YLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 354 GFVDMGEKIGNKLIQLDPMHD 374
G + + + K+ + P+ D
Sbjct: 554 GLKEEADALFRKMREDGPLPD 574
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
I T + ++ G DA+AL + + G+ P +TF +++ + SE +
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 297 LMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM---TVEPDPVLWATLLDA-CKV 352
MV G QP + YG +V+ L + G +D A +L+ M +E + V+++T++D+ CK
Sbjct: 215 RMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 353 H---GFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEK 403
+++ ++ NK ++ + + Y L +W D R+ MIE+
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVI---TYSSLISCLCNYERWSDASRLLSDMIER 324
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 152/348 (43%), Gaps = 19/348 (5%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E++ ++ M ++ PN T+ + + A L + ++ + K G +V
Sbjct: 361 EALKVFEEM---KKDAAPNLSTYNILIDMLCR--AGKLDTAFELRDSMQKAGLFPNVRTV 415
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCS-DVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
N ++ C+ ++ +FEE + +C+ D +T+ S++ G+ + G + DA KV+++M
Sbjct: 416 NIMVDRLCK-SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 133 ERDV----VSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+ D + ++++I + +G EDG + + M + P+ E
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMI 244
GR + I++ +F + L+ K G ++ LF S+ + D +N++I
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGI 304
G G A L + ++GF P VT+ V++ + + E F I
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE-EAKSKRI 653
Query: 305 QPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDA 349
+ + Y ++D + G +DEA ++E + + P+ W +LLDA
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 125/291 (42%), Gaps = 13/291 (4%)
Query: 4 CHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVK 63
C KA P + A++ ++ RRFV P+ +++ +H K A ++ + +
Sbjct: 526 CMFKAGEP-EKGRAMFEE-IKARRFV-PDARSYSILIHGLIK--AGFANETYELFYSMKE 580
Query: 64 LGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRD 123
G D N +I +C+CG ++++ + E + VVT+ SV+ G+ + + +
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 124 AEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
A +F+E E +VV +S++I G+ + G +++ + +KG+ PN
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI-- 237
+++ LK L++ K K+ ++ + + +
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 238 --WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGG 286
++ MI GLA G +A ALF +F + G +P + + ++ S G
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/318 (18%), Positives = 128/318 (40%), Gaps = 20/318 (6%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+KP++ T+T + K A+ L V++ H+ K + N +I Y G E
Sbjct: 269 LKPDEVTYTSMIGVLCK--ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER---DVVSWSTMIMG 145
++ + + V+ +N +L + + G++ +A KVF+EM + ++ +++ +I
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDM 386
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE--CGRFVHSTIESLKFR 203
+ G L+ E M++ G+ PN + C F E + ++
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF-----EEMDYK 441
Query: 204 ITVP---VGTALVDMYAKCGCIEKSRALFESISGKDIWT----WNVMICGLASHGLAKDA 256
+ P +L+D K G ++ + ++E + D T + +I +HG +D
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 257 LALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVD 316
++ +++ P ++ + C E R + P+ Y ++
Sbjct: 502 HKIYKDMINQNCSP-DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 317 LLARAGLVDEAVHLIETM 334
L +AG +E L +M
Sbjct: 561 GLIKAGFANETYELFYSM 578
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 132/344 (38%), Gaps = 63/344 (18%)
Query: 107 TWNSVLAGVVRNGEIRDAEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECFSVM 162
++NS+L + R +++ EM V + M++G V+ L +G + +M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 163 REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI 222
R+ RP + + ++ L + TV + T L+ +AK G +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 223 EKSRALFESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTF--- 275
+ + +L + + DI +NV I G A FH+ + G P VT+
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 276 VGVL-------NACSMGGLVSEGKRY-----FNLMVDCYGIQ------------------ 305
+GVL A M + + +R +N M+ YG
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 306 -PEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL--WATLLDACKVHGFVDMGEKI 362
P + Y C++ L + G VDEA+ + E M + P L + L+D G +D ++
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 363 GNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSK 406
+ + Q AG++ VR +M++++ K
Sbjct: 400 RDSM------------QKAGLFPN-------VRTVNIMVDRLCK 424
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 128/341 (37%), Gaps = 80/341 (23%)
Query: 108 WNSVLAGVVRNGEIRDAEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
+ +++ G + G + A + DEM + D+V ++ I + + G ++ + F +
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIE 223
G++P+E T+++ + K ++
Sbjct: 266 ANGLKPDEVTY-----------------------------------TSMIGVLCKANRLD 290
Query: 224 KSRALFESISGKD----IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVL 279
++ +FE + + +N MI G S G +A +L + ++G IP + + +L
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 280 NACSMGGLVSEGKRYF--------------NLMVDCY-------------------GIQP 306
G V E + F N+++D G+ P
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDACKVHGFVDMGEKIG 363
+ MVD L ++ +DEA + E M + PD + + +L+D G VD K+
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 364 NKLIQLDPMHDGH-YVQLAGIYAKARKWEDVVRVRKLMIEK 403
K++ D + Y L + + ED ++ K MI +
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 14/279 (5%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
GFA D L++ C+ G V++ K +F ++V +N+++ G V +G + DA
Sbjct: 317 GFAPDDITYGYLMNGLCKIGR-VDAAKDLFYRIPK---PEIVIFNTLIHGFVTHGRLDDA 372
Query: 125 EKVFDEMPER-----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
+ V +M DV +++++I GY + GL+ LE MR KG +PN
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK---- 235
+ V + + + + L+ + K I ++ +F + K
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 236 DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF 295
D++T+N +I GL K AL L +SEG + VT+ ++NA G + E ++
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 296 NLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
N MV G + Y ++ L RAG VD+A L E M
Sbjct: 553 NEMV-FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 144/339 (42%), Gaps = 49/339 (14%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+ P+ T+ ++ K GL ++V + G +V+ L+ +C+ G E
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLA--LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIM 144
++ + E D L + V +N +++ + I +A ++F EMP + DV +++++I
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 145 GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
G + ++ L M +G+ N
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVAN---------------------------------- 528
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESI----SGKDIWTWNVMICGLASHGLAKDALALF 260
TV T L++ + + G I+++R L + S D T+N +I GL G A +LF
Sbjct: 529 TVTYNT-LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 261 HKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLAR 320
K L +G P N++ ++N G+V E + MV G P++ + +++ L R
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV-LRGSTPDIVTFNSLINGLCR 646
Query: 321 AGLVDEAVHLIETMTVE---PDPVLWATLLDACKVHGFV 356
AG +++ + + + E PD V + TL+ GFV
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 111/267 (41%), Gaps = 37/267 (13%)
Query: 29 VKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVE 88
+KPN F + A K + V++ + + G DV+ N+LI CE
Sbjct: 455 LKPNTVGFNCLISAFCKEHR--IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 89 SFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM----PERDVVSWSTMIM 144
+ + + + + ++ VT+N+++ +R GEI++A K+ +EM D ++++++I
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 145 GYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRI 204
G + G ++ F M G P+ C ++ S
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSN---------------ISCNILINGLCRS----- 612
Query: 205 TVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFL 264
+V+ +E + + S DI T+N +I GL G +D L +F K
Sbjct: 613 ------GMVE-----EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 265 SEGFIPVNVTFVGVLNACSMGGLVSEG 291
+EG P VTF +++ GG V +
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDA 688
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 151/346 (43%), Gaps = 14/346 (4%)
Query: 15 SIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRN 74
S A+ + + + VK N T++ ++ K + V +VK G DV + N
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVK--LKDWANAFAVFEDMVKEGMKPDVILYN 558
Query: 75 ALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE- 133
+I +C G+ + + V E ++ T+ ++ G ++G++R + +VFD M
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 134 ---RDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECG 190
V +++ +I G V+ +E +E M G+ NE
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI----WTWNVMICG 246
+ +++ + + AL+ K G ++ + A+ + +S ++I + +N++I G
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 738
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQP 306
A G +A L + EG P T+ ++ACS G ++ + M + G++P
Sbjct: 739 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKP 797
Query: 307 EMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDA 349
++ Y ++ ARA L ++A+ E M ++PD ++ LL +
Sbjct: 798 NIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 130/333 (39%), Gaps = 54/333 (16%)
Query: 54 GVQVHAHVVKLGFARDVFVRNALIHLYCECG--SSVESFKRVFEEEEDTLCSDVVTWNSV 111
G+ V + + GF V LI+LY + G S RV +EE + ++ T++ +
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEE--GVKHNLKTYSMM 525
Query: 112 LAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGI 167
+ G V+ + +A VF++M + DV+ ++ +I + G ++ ++ M++
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 168 RPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI----- 222
RP +H +S R ++ V DM +CGC+
Sbjct: 586 RPTTRTFMP---------------IIHGYAKSGDMRRSLEV----FDMMRRCGCVPTVHT 626
Query: 223 --------------EKSRALFESIS----GKDIWTWNVMICGLASHGLAKDALALFHKFL 264
EK+ + + ++ + T+ ++ G AS G A F +
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 265 SEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLV 324
+EG T+ +L AC G + M I Y ++D AR G V
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM-SARNIPRNSFVYNILIDGWARRGDV 745
Query: 325 DEAVHLIETMT---VEPDPVLWATLLDACKVHG 354
EA LI+ M V+PD + + + AC G
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 106/278 (38%), Gaps = 22/278 (7%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR-------------NALIH 78
N A +K + + G V+ + + AR+ F R +LIH
Sbjct: 293 NWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIH 352
Query: 79 LYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE----R 134
Y E+ V + +E+ + +VT++ ++ G + G A+ FDE
Sbjct: 353 AYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL 412
Query: 135 DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVH 194
+ + +I + Q +E M E+GI + G V
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 195 STIESLKFRITVPVGTALVDMYAKCGCIEK----SRALFESISGKDIWTWNVMICGLASH 250
++ F TV L+++Y K G I K SR + E ++ T+++MI G
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 251 GLAKDALALFHKFLSEGFIPVNVTFVGVLNA-CSMGGL 287
+A A+F + EG P + + +++A C MG +
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 148/346 (42%), Gaps = 44/346 (12%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
+++ + ML+R + P+ T+T + A + SG+G +++ + G DV
Sbjct: 222 QAMEVLDRMLQRDCY--PDVITYTILIEATCR--DSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N L++ C+ G E+ K + + +V+T N +L + G DAEK+ +M
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 134 R----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
+ VV+++ +I + GLL ++ M + G +PN
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY--------------- 382
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
+H + K + +V SR + DI T+N M+ L
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMV-----------SRGCY-----PDIVTYNTMLTALCK 426
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEME 309
G +DA+ + ++ S+G PV +T+ V++ + G + + + M ++P+
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTI 485
Query: 310 HYGCMVDLLARAGLVDEAV---HLIETMTVEPDPVLW-ATLLDACK 351
Y +V L+R G VDEA+ H E M + P+ V + + +L CK
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 158/384 (41%), Gaps = 28/384 (7%)
Query: 51 LGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNS 110
L G + ++V G D+ LI +C G + ++ K + E DV+T+N
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 111 VLAGVVRNGEIRDAEKVFDEMP-ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRP 169
+++G + GEI +A V D M DVV+++T++ +G L+ +E M ++ P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 170 NEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP---VGTALVDMYAKCGCIEKSR 226
+ ++ ++ R P LV+ K G ++++
Sbjct: 238 DVITYTILIEATCRDSGVG---HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 227 ALFESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNAC 282
+ ++ T N+++ + S G DA L L +GF P VTF ++N
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 283 SMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PD 339
GL+ M +G QP Y ++ + +D A+ +E M PD
Sbjct: 355 CRKGLLGRAIDILEKMPQ-HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 340 PVLWATLLDAC----KVHGFVDMGEKIGNK-----LIQLDPMHDGHYVQLAGIYAKARKW 390
V + T+L A KV V++ ++ +K LI + + DG + AG KA K
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG--LAKAGKTGKAIKL 471
Query: 391 EDVVRVRKLMIEKV--SKKVAGWS 412
D +R + L + + S V G S
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLS 495
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 153/364 (42%), Gaps = 26/364 (7%)
Query: 59 AHVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRN 118
A ++ V +L+ YC G ++ + E + + T+ ++L+G+ R
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 119 GEIRDAEKVFDEMPERDV----VSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXX 174
G IRDA K+F+EM E +V V+++ MI GY + G + E M EKGI P+
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 175 XXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISG 234
+ + + T L+ + + G +E++ ++ + +
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 235 K----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSE 290
+ D+ + V+I G H K L + G P +V + +++A S G E
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 291 GKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM---TVEPDPVLWATLL 347
++LM++ G P Y +++ L +AG V+EA L M + P+ V + L
Sbjct: 701 AFGIWDLMIN-EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Query: 348 DACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVR--VRKLMIEKVS 405
D G VDM K ++L H L G+ A + ++R R+ IE+ S
Sbjct: 760 DIL-TKGEVDM-----QKAVEL------HNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 406 KKVA 409
+ +
Sbjct: 808 ELIT 811
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/383 (17%), Positives = 148/383 (38%), Gaps = 52/383 (13%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
+ + ++ M+ + + P T + LH K GL +++ +V +G DV++
Sbjct: 174 DGVLVFKMMITKVSLL-PEVRTLSALLHGLVKFRHFGLA--MELFNDMVSVGIRPDVYIY 230
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCS-DVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
+I CE + K + E T C ++V +N ++ G+ + ++ +A + ++
Sbjct: 231 TGVIRSLCEL-KDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 133 ER----DVVSWSTMIMGYVQNGLLEDGLECFSVM-------------------REK---- 165
+ DVV++ T++ G + E GLE M R++
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 166 ------------GIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALV 213
G+ PN + + + R + L+
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 214 DMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
DM+ + G ++ + + + ++ +N +I G G A + +++
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
P VT+ ++ G +++ R ++ M GI P + + ++ L RAGL+ +AV
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTG-KGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 330 LIETM---TVEPDPVLWATLLDA 349
L M V+P+ V + +++
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEG 551
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 170/386 (44%), Gaps = 23/386 (5%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I C +K S+++ ++++M +R +P+ TFT +H + + + + V
Sbjct: 157 IIYCLSKLGQS-SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE--IENCRAVFEA 213
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+V G ++ NAL+ Y G S + + + +++ + DVV++ +L R+ +
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 121 IRDAEKVF----DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
A++VF E + +VV+++ +I Y NG L + +E F M + GI+PN
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 333
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK- 235
V S +S + + + Y +EK+ AL++S+ K
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 393
Query: 236 ---DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNV-TFVGVLNACSMGGLVSEG 291
D T+ ++I G +A++ + K + + IP+ + VL A S G V+E
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAIS-YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 452
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHL---IETMTVEPDPVLWATLLD 348
+ FN M G +P++ Y M+ + +A L +E +EPD + + L+
Sbjct: 453 ESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMR 511
Query: 349 ACKVHGFVDMGEKIGNKLIQLDPMHD 374
A + G + N + +D M +
Sbjct: 512 A------FNKGGQPSNVFVLMDLMRE 531
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 170/386 (44%), Gaps = 23/386 (5%)
Query: 1 MIRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAH 60
+I C +K S+++ ++++M +R +P+ TFT +H + + + + V
Sbjct: 289 IIYCLSKLGQS-SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE--IENCRAVFEA 345
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
+V G ++ NAL+ Y G S + + + +++ + DVV++ +L R+ +
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 121 IRDAEKVF----DEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
A++VF E + +VV+++ +I Y NG L + +E F M + GI+PN
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 465
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK- 235
V S +S + + + Y +EK+ AL++S+ K
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 525
Query: 236 ---DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNV-TFVGVLNACSMGGLVSEG 291
D T+ ++I G +A++ + K + + IP+ + VL A S G V+E
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAIS-YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHL---IETMTVEPDPVLWATLLD 348
+ FN M G +P++ Y M+ + +A L +E +EPD + + L+
Sbjct: 585 ESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMR 643
Query: 349 ACKVHGFVDMGEKIGNKLIQLDPMHD 374
A + G + N + +D M +
Sbjct: 644 A------FNKGGQPSNVFVLMDLMRE 663
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 164/392 (41%), Gaps = 27/392 (6%)
Query: 2 IRCHAKANSPPSESIAIYSAMLRRRRFVKPNQHTFTFALHACTK--RAASGLGSGVQVHA 59
I + K+ + S+ +Y ML + + PN T+T + + R G ++
Sbjct: 363 IDVYVKSGDLATASV-VYKRMLCQG--ISPNVVTYTILIKGLCQDGRIYEAFG----MYG 415
Query: 60 HVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNG 119
++K G + ++LI +C+CG+ F + + DVV + ++ G+ + G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 120 ----EIRDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXX 175
+R + K+ + +VV ++++I G+ + ++ L+ F +M GI+P+
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 176 XXXXXXXXX------XXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALF 229
G + ++ K + V ++ + KC IE + F
Sbjct: 536 TVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 595
Query: 230 ES-ISGK---DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMG 285
+ I GK DI T+N MICG S +A +F F P VT +++
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Query: 286 GLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVL 342
+ R F++M + G +P YGC++D +++ ++ + L E M + P V
Sbjct: 656 NDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 714
Query: 343 WATLLDACKVHGFVDMGEKIGNKLIQLDPMHD 374
++ ++D G VD I ++ I + D
Sbjct: 715 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 746
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 16/264 (6%)
Query: 105 VVTWNSVLAGV-VRNGEI--RDAEKVFDEMPERDVVSWSTMIMGYVQNGLLEDGLECFSV 161
+V+ N VL G+ V E+ R V D P +VV++ T+I G+ + G ++ + F V
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 162 MREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGC 221
M ++GI P+ G + S ++ V V ++ +D+Y K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 222 IEKS-----RALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFV 276
+ + R L + IS ++ T+ ++I GL G +A ++ + L G P VT+
Sbjct: 372 LATASVVYKRMLCQGIS-PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 277 GVLNA-CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM- 334
+++ C G L S Y +++ G P++ YG +VD L++ GL+ A+ M
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIK--MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 335 --TVEPDPVLWATLLDA-CKVHGF 355
++ + V++ +L+D C+++ F
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRF 512
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 58/306 (18%)
Query: 29 VKPNQHTFTFALHACTKRAA----SGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
+KP+ TFT + A G+Q+ + + + D+ V N +IHL +C
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586
Query: 85 SSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWS 140
++ K E + D+VT+N+++ G + +AE++F+ + + V+ +
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 141 TMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESL 200
+I +N ++ + FS+M EKG +PN
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPN------------------------------ 676
Query: 201 KFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDA 256
V G L+D ++K IE S LFE + K I +++++I GL G +A
Sbjct: 677 ----AVTYG-CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Query: 257 LALFHKFLSEGFIPVNVTFVGVLNA-CSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMV 315
+FH+ + +P V + ++ C +G LV Y +++ + G++P+
Sbjct: 732 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN--GVKPD-------- 781
Query: 316 DLLARA 321
DLL RA
Sbjct: 782 DLLQRA 787
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 153/360 (42%), Gaps = 51/360 (14%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
++IA++ M+R R + F+ A TK+ L Q+ + G A +++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN----GIAHNIYTL 126
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N +I+ +C C + ++ + + + D T+N+++ G+ G++ +A + D M E
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 134 R----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
DVV++++++ G ++G L+ M E+ ++ +
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADV------------------ 228
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIW----TWNVMIC 245
F +STI +D + GCI+ + +LF+ + K I T+N ++
Sbjct: 229 --FTYSTI---------------IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
GL G D L +S +P +TF +L+ G + E + M+ GI
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT-RGIS 330
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKI 362
P + Y ++D + EA ++++ M PD V + +L+ + VD G K+
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/341 (19%), Positives = 140/341 (41%), Gaps = 16/341 (4%)
Query: 22 MLRR--RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHL 79
+LR+ R VK + T++ + + + + + + + + G V N+L+
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGC--IDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 80 YCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----D 135
C+ G + + + + +V+T+N +L V+ G++++A +++ EM R +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 136 VVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHS 195
+++++T++ GY L + +M P+ + G V
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 196 TIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISG----KDIWTWNVMICGLASHG 251
I + LV + + G I+ + LF+ + D+ T+ +++ GL +G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 252 LAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHY 311
+ AL +F V + ++ GG V + F + C G++P + Y
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF-CSLPCKGVKPNVMTY 511
Query: 312 GCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDA 349
M+ L + G + EA L+ M + P+ + TL+ A
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 130/304 (42%), Gaps = 13/304 (4%)
Query: 60 HVVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNG 119
+V+ G DV N++++ C G + + + + EE + +DV T+++++ + R+G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 120 EIRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXX 175
I A +F EM + VV++++++ G + G DG M + I PN
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 176 XXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESI--- 232
+ ++ + + + L+D Y + ++ + + +
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 233 -SGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEG 291
DI T+ +I G D + +F G + VT+ ++ G +
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 292 KRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLD 348
+ F MV +G+ P++ YG ++D L G +++A+ + E + ++ V++ T+++
Sbjct: 423 EELFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 349 A-CK 351
CK
Sbjct: 482 GMCK 485
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 140/334 (41%), Gaps = 14/334 (4%)
Query: 32 NQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFK 91
N + F ++ K + +V + K V N LI+ YC+ G+ E F+
Sbjct: 239 NVYVFNILMNKFCKEG--NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFR 296
Query: 92 RVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDVVS----WSTMIMGYV 147
+ E+ DV T+++++ + + ++ A +FDEM +R ++ ++T+I G+
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVP 207
+NG ++ E + M KG++P+ R + + R
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 208 VGTALVDMYAKCGCIEKSRALFESISGKDIWT----WNVMICGLASHGLAKDALALFHKF 263
T L+D + + G +E + + + + I ++ ++CG+ G DA +
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 264 LSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGL 323
L G P +VT+ +++A G G + M G P + Y +++ L + G
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM-QSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 324 VDEAVHLIETMT---VEPDPVLWATLLDACKVHG 354
+ A L++ M V PD + + TLL+ H
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA 569
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 128/272 (47%), Gaps = 14/272 (5%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
S++ + S M++++ + PN T++ L A K + ++ +V++ D+
Sbjct: 242 SDAARLLSDMIKKK--ITPNVITYSALLDAFVKNGK--VLEAKELFEEMVRMSIDPDIVT 297
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLC-SDVVTWNSVLAGVVRNGEIRDAEKVFDEM 131
++LI+ C ++ ++F+ C +DVV++N+++ G + + D K+F EM
Sbjct: 298 YSSLINGLC-LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 132 PER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXX 187
+R + V+++T+I G+ Q G ++ E FS M GI P+
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 188 ECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVM 243
E + ++ + + + T ++ K G +E++ +LF S+S K DI T+ M
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 244 ICGLASHGLAKDALALFHKFLSEGFIPVNVTF 275
+ GL + GL + AL+ K EG + + T
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
R+ ++PN T+T ++ +S ++ + ++K +V +AL+ + + G
Sbjct: 218 RKGIRPNVVTYTALVNGLCN--SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 86 SVESFKRVFEEE-EDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWS 140
+E+ K +FEE ++ D+VT++S++ G+ + I +A ++FD M + DVVS++
Sbjct: 276 VLEA-KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYN 334
Query: 141 TMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESL 200
T+I G+ + +EDG++ F M ++G+ N + + S ++
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF- 393
Query: 201 KFRITVPVGTALVDMYAKC--GCIEKSRALFESISGK----DIWTWNVMICGLASHGLAK 254
F I+ + T + + C G +EK+ +FE + + DI T+ +I G+ G +
Sbjct: 394 -FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 255 DALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLM 298
+A +LF +G P VT+ +++ GL+ E + + M
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 140/325 (43%), Gaps = 41/325 (12%)
Query: 30 KPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVES 89
+P++ T ++ +R + + V + +V++G+ D+ NA+I C+ ++
Sbjct: 152 EPDRVTIGSLVNGFCRR--NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 90 FKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMG 145
F E E + +VVT+ +++ G+ + DA ++ +M ++ +V+++S ++
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 146 YVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRIT 205
+V+NG + + E F M I P+ S I L
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTY-------------------SSLINGLCLHDR 310
Query: 206 VPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLS 265
+ + D+ GC+ D+ ++N +I G +D + LF +
Sbjct: 311 IDEANQMFDLMVSKGCLA------------DVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
G + VT+ ++ G V + + +F+ M D +GI P++ Y ++ L G ++
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELE 417
Query: 326 EAVHLIETMT---VEPDPVLWATLL 347
+A+ + E M ++ D V + T++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVI 442
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 16/269 (5%)
Query: 18 IYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALI 77
+Y M+RR+ ++PN TF ++A K V V G + +V N LI
Sbjct: 210 VYKEMIRRK--IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY--GCSPNVVSYNTLI 265
Query: 78 HLYCECGSSVESFKR---VFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER 134
YC+ G + + +K + E E+ + ++ T+N ++ G ++ + + KVF EM ++
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 135 DV----VSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECG 190
DV +S++++I G G + + + M G++PN +
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 191 RFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICG 246
+ +++ T + L+D Y K G I+ AL E + + D+ T+N +I G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 247 LASHGLAKDALALFHKFLSEGFIPVNVTF 275
L +G + A LF + S+G +P VTF
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKG-LPDLVTF 473
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 37/266 (13%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
SE+I++ M+ V+PN T+ ++ K L + + V G +
Sbjct: 348 SEAISMRDKMVSAG--VQPNLITYNALINGFCKNDM--LKEALDMFGSVKGQGAVPTTRM 403
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
N LI YC+ G + F E E + + DV T+N ++AG+ RNG I A+K+FD++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 133 ER---DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
+ D+V++ ++ GY + G M + G++P
Sbjct: 464 SKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG--------- 514
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLAS 249
+ +LK A +M + +EK R L +++ ++NV++ G +
Sbjct: 515 ----YCKEGNLK---------AATNMRTQ---MEKERRLRMNVA-----SYNVLLQGYSQ 553
Query: 250 HGLAKDALALFHKFLSEGFIPVNVTF 275
G +DA L ++ L +G +P +T+
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITY 579
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 146/368 (39%), Gaps = 78/368 (21%)
Query: 27 RFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSS 86
R + PN+ T+T + +R ++ ++ + G D NAL+ +C+ G
Sbjct: 227 RGISPNRVTYTILISGLCQRGSAD--DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRM 284
Query: 87 VESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTM 142
VE+F+ + E+D + ++S++ G+ R A +++ M ++ D++ ++ +
Sbjct: 285 VEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTIL 344
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF 202
I G + G +ED L+ S M KGI P+ CGR + SL+
Sbjct: 345 IQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKAL-------CGRGLLEEGRSLQL 397
Query: 203 RITVPVGTALVDMYAKCGCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHK 262
++ E+ S D T ++IC + +GL ++A +F +
Sbjct: 398 EMS------------------------ETESFPDACTHTILICSMCRNGLVREAEEIFTE 433
Query: 263 FLSEGFIPVNVTFVGVLNACSMGGLVSE-----------------------GKRYFNLMV 299
G P TF +++ G + E G R F+ MV
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV 493
Query: 300 DC---------------YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPV 341
+ G P++ Y +++ RAG +D A+ L+ + ++ PD V
Sbjct: 494 ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSV 553
Query: 342 LWATLLDA 349
+ TL++
Sbjct: 554 TYNTLING 561
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 24/277 (8%)
Query: 93 VFEEEEDTLCS-DVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDV----VSWSTMIMGYV 147
V+ E CS ++ T+ ++ G+ + G DA+K+FD+M R + V+++ +I G
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244
Query: 148 QNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHS-----TIESLKF 202
Q G +D + F M+ G P+ + GR V + E F
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC-----KLGRMVEAFELLRLFEKDGF 299
Query: 203 RITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDALA 258
+ + ++L+D + ++ L+ ++ K DI + ++I GL+ G +DAL
Sbjct: 300 VLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALK 359
Query: 259 LFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLL 318
L S+G P + V+ A GL+ EG R L + P+ + ++ +
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG-RSLQLEMSETESFPDACTHTILICSM 418
Query: 319 ARAGLVDEAVHL---IETMTVEPDPVLWATLLDA-CK 351
R GLV EA + IE P + L+D CK
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 117/291 (40%), Gaps = 43/291 (14%)
Query: 13 SESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFV 72
+++ +Y+ ML++ +KP+ +T + +K A + +++ + + G + D +
Sbjct: 320 TQAFELYANMLKKN--IKPDIILYTILIQGLSK--AGKIEDALKLLSSMPSKGISPDTYC 375
Query: 73 RNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP 132
NA+I C G E E E D T ++ + RNG +R+AE++F E+
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Query: 133 ER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXE 188
+ V +++ +I G ++G L++ M E G RP
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EVG-RPASLFL-------------- 479
Query: 189 CGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRA----LFESISGKDIWTWNVMI 244
R HS G D + G I K+ ++ S DI ++NV+I
Sbjct: 480 --RLSHS-------------GNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLI 524
Query: 245 CGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF 295
G G AL L + +G P +VT+ ++N G E + F
Sbjct: 525 NGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 159/384 (41%), Gaps = 68/384 (17%)
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
N LI LY + G ++ E + + D VT+N+++ +G + +AE + +M E
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 134 R----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
+ D +++ ++ + G +E LE + +R+ G+ P+
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 190 GRFVHSTIESLKFRI---TVPVGTALVDMYAKCGCIEKSRALFE---------------- 230
V + ++ RI +VPV ++ MY G + +++ALFE
Sbjct: 429 VEAVIAEMDRNSIRIDEHSVPV---IMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAV 485
Query: 231 ---------------------SISGK--DIWTWNVMICGLASHGLAKDALALFHKFLSEG 267
++SG+ D+ +NVMI L + AL+LF ++G
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 268 FIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEA 327
P T+ + + LV E +R M+D G +P + Y M+ R GL+ +A
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDS-GCKPGCKTYAAMIASYVRLGLLSDA 604
Query: 328 VHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQ----- 379
V L E M V+P+ V++ +L ++GF + G + + IQ M + H VQ
Sbjct: 605 VDLYEAMEKTGVKPNEVVYGSL-----INGFAESG--MVEEAIQYFRMMEEHGVQSNHIV 657
Query: 380 ---LAGIYAKARKWEDVVRVRKLM 400
L Y+K E+ RV M
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKM 681
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 120/297 (40%), Gaps = 23/297 (7%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
G DV N +I Y + ++ + D T+NS+ + + +A
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 125 EKVFDEMPERDVV----SWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
+++ EM + +++ MI YV+ GLL D ++ + M + G++PNE
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESIS----GKD 236
E +E + V T+L+ Y+K GC+E++R +++ + G D
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGL------VSE 290
+ N M+ A G+ +A ++F+ +G V ++F ++ G+ V+E
Sbjct: 690 VAASNSMLSLCADLGIVSEAESIFNALREKGTCDV-ISFATMMYLYKGMGMLDEAIEVAE 748
Query: 291 GKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVL-WATL 346
R L+ DC M Y A G + E L M VE +L W T
Sbjct: 749 EMRESGLLSDCTSFNQVMACY-------AADGQLSECCELFHEMLVERKLLLDWGTF 798
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 136/385 (35%), Gaps = 86/385 (22%)
Query: 29 VKPNQHTFT--FALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSS 86
+ P+ T+ +LHA A + + ++ + + K+G D A++H+ C+
Sbjct: 371 ISPDTKTYNILLSLHA----DAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 87 VESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMP-------------- 132
E + E + +++ D + ++ V G + A+ +F+
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 133 -------------------------ERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGI 167
DV+ ++ MI Y + L E L F M+ +G
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 168 RPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRA 227
P+E T SL + G LVD E R
Sbjct: 547 WPDE-----------------------CTYNSL---FQMLAGVDLVD--------EAQRI 572
Query: 228 LFESISG---KDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSM 284
L E + T+ MI GL DA+ L+ G P V + ++N +
Sbjct: 573 LAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAE 632
Query: 285 GGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPV 341
G+V E +YF +M + +G+Q ++ ++ G ++EA + + M PD
Sbjct: 633 SGMVEEAIQYFRMMEE-HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA 691
Query: 342 LWATLLDACKVHGFVDMGEKIGNKL 366
++L C G V E I N L
Sbjct: 692 ASNSMLSLCADLGIVSEAESIFNAL 716
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 140/338 (41%), Gaps = 17/338 (5%)
Query: 25 RRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECG 84
+R P +T+T + K A + + +++ G DV N L+++ + G
Sbjct: 295 KRAGCSPTVYTYTELIKGLGK--AGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVG 352
Query: 85 SSVESFKRVFEEEEDTLCS-DVVTWNSVLAGVVRN-GEIRDAEKVFDEMPERDV----VS 138
VE VF E C+ VV++N+V+ + + + + FD+M V +
Sbjct: 353 R-VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 139 WSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIE 198
+S +I GY + +E L M EKG P E + ++
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 199 SLKFRITVPVGTALVDMYAKCGCIEKSRALFESI----SGKDIWTWNVMICGLASHGLAK 254
++ V ++ + KCG + ++ LF + SG D++ +N ++ G+ G+
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 255 DALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCM 314
+A +L K G + +LN + G+ F + GI+P+ Y +
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE-TIKHSGIKPDGVTYNTL 590
Query: 315 VDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDA 349
+ A AG+ +EA ++ M E D + ++++LDA
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 155/376 (41%), Gaps = 52/376 (13%)
Query: 67 ARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEK 126
A DV N L+H Y + G VE+ + + +VT+N+++ G+ +G + A++
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 127 VFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXX 182
+ +EM + DV++++T++ G+V+NG L E + M KGI+P+
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL 490
Query: 183 XXXXXECGRFVHSTIESLKFRIT-VPVGTALVDMYAKCG----CIEKSRALFESISGKDI 237
+ +H + + + + +D K G IE R +F D
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 238 WTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNL 297
T+ +I G +G K A L+ + L + P +T+ ++ + G + + +Y
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 298 MVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLLDACKVHGFVD 357
M G++P + + ++ + +AG +DEA + CK+
Sbjct: 611 MKK-RGVRPNVMTHNALLYGMCKAGNIDEAYRYL------------------CKME---- 647
Query: 358 MGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWEDVVRVRKLMIEKVSKKVAGWSLVELE 417
E I P + Y L KWE+VV++ K M++K +E +
Sbjct: 648 -EEGI--------PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE---------IEPD 689
Query: 418 GGIHH--FVAGDKDHD 431
G H F +KDH+
Sbjct: 690 GYTHRALFKHLEKDHE 705
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 117/290 (40%), Gaps = 51/290 (17%)
Query: 98 EDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPERDV----VSWSTMIMGYVQNGLLE 153
E + V+T+N++L + G++ +K++ EM R++ V+++ +I G+ +NG +E
Sbjct: 231 EHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKME 290
Query: 154 DGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALV 213
+ MR G F +T L+
Sbjct: 291 EARRFHGDMRRSG-----------------------------------FAVTPYSFNPLI 315
Query: 214 DMYAKCGCIEKSRALFESISGKDIW----TWNVMICGLASHGLAKDALALFHKFLSEGFI 269
+ Y K G + + + + + I+ T+N+ IC L G DA L + +
Sbjct: 316 EGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVV 375
Query: 270 PVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVH 329
N G + MG V + +L I P + Y ++D L +G ++ A
Sbjct: 376 SYNTLMHGYI---KMGKFVEASLLFDDLRAG--DIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 330 LIETMTVE---PDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGH 376
L E MT + PD + + TL+ +G + M ++ +++++ DG+
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 18/264 (6%)
Query: 106 VTWNSVLAGVVRNGEIRDAEKVFDEMPERDVV----SWSTMIMGYVQNGLLEDGLECFSV 161
VT+N ++ G +NG++ +A + +M S++ +I GY + GL +D
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 162 MREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGC 221
M GI P + R + S++ + V L+ Y K G
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGK 389
Query: 222 IEKSRALFESISGKDIW----TWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVG 277
++ LF+ + DI T+N +I GL G + A L + ++ P +T+
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 278 VLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMTVE 337
++ G +S ++ M+ GI+P+ Y R G D+A L E M
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRK-GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVAT 508
Query: 338 ----PDPVLWATLLDA-CKVHGFV 356
PD ++ +D CKV V
Sbjct: 509 DHHAPDLTIYNVRIDGLCKVGNLV 532
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 146/349 (41%), Gaps = 27/349 (7%)
Query: 27 RFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSS 86
R KPN HT+T + + +GV +VK V NALI+ YC+ G
Sbjct: 330 RGCKPNVHTYTVLIDGLCRDGKIEEANGV--CRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 87 VESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA----EKVFDEMPERDVVSWSTM 142
V +F+ + E+ +V T+N ++ G+ R G+ A +++ D D+VS++ +
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 143 IMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKF 202
I G + G + + S M I P+ + V S L
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD----VASAFLGLML 503
Query: 203 RITVPV----GTALVDMYAKCGCIEKSRALFESISGKDIWT----WNVMICGLASHGLAK 254
R + + GT L+D K G + + E++ I T NV++ L+ K
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Query: 255 DALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCM 314
+ LA+ K G +P VT+ +++ G ++ R LM G P + Y +
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM-KLSGCLPNVYPYTII 622
Query: 315 VDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGE 360
++ L + G V+EA L+ M V P+ V + + V G+V+ G+
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM-----VKGYVNNGK 666
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 112/276 (40%), Gaps = 39/276 (14%)
Query: 109 NSVLAGVVRNGEIRDAEKVFDEMPER-----DVVSWSTMIMGYVQNGLLEDGLECFSVMR 163
S+L G R +RDA KVFD M + + VS+S +I G + G LE+ M
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 164 EKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG--------TALVDM 215
EKG +P+ C R + +L F +P G T L+D
Sbjct: 294 EKGCQPSTRTYTVLIKAL-------CDRGLIDKAFNL-FDEMIPRGCKPNVHTYTVLIDG 345
Query: 216 YAKCGCIEKSRALFESISGKDIW----TWNVMICGLASHGLAKDALALFHKFLSEGFIPV 271
+ G IE++ + + I+ T+N +I G G A L P
Sbjct: 346 LCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Query: 272 NVTFVGVLNACSMGGLVSEGKRY-----FNLMVDCYGIQPEMEHYGCMVDLLARAGLVDE 326
TF + M GL GK Y M+D G+ P++ Y ++D L R G ++
Sbjct: 406 VRTFNEL-----MEGLCRVGKPYKAVHLLKRMLD-NGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 327 AVHLIETMT---VEPDPVLWATLLDACKVHGFVDMG 359
A L+ +M +EPD + + +++A G D+
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 153/361 (42%), Gaps = 33/361 (9%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
E+ ++S M R R V P+ F+ + T+ + L + V + G D +
Sbjct: 358 ETEKVFSDM--RSRDVVPDLVCFSSMMSLFTR--SGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPE 133
LI YC G + E + DVVT+N++L G+ + + +A+K+F+EM E
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 134 R----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
R D + + +I G+ + G L++ +E F M+EK IR + +
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGKDI----WTWNVMIC 245
+ + + + S + T + LV+ G + ++ +++ + K+I N MI
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVT-------FVGVLNACSMGGLVSEGKRYFNLM 298
G G A D + K +SEGF+P ++ FV N GLV + +
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE----- 648
Query: 299 VDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKVHGF 355
+ G+ P++ Y ++ R + EA ++ M V PD + C ++GF
Sbjct: 649 -EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY-----TCMINGF 702
Query: 356 V 356
V
Sbjct: 703 V 703
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 150/343 (43%), Gaps = 17/343 (4%)
Query: 36 FTFALHACTKRAASGLGSG-VQ----VHAHVVKLGFARDVFVRNALIHLYCECGSSVESF 90
FT ++ AC S + G V+ V+ + + G +V+ N +++ C+ G +
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVG 255
Query: 91 KRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMGY 146
+ + +E + D+VT+N++++ G + +A ++ + MP + V +++T+I G
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 147 VQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITV 206
++G E E F+ M G+ P+ V S + S +
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 207 PVGTALVDMYAKCGCIEKSRALFESISG----KDIWTWNVMICGLASHGLAKDALALFHK 262
++++ ++ + G ++K+ F S+ D + ++I G G+ A+ L ++
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 263 FLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAG 322
L +G VT+ +L+ ++ E + FN M + + P+ ++D + G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE-RALFPDSYTLTILIDGHCKLG 494
Query: 323 LVDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGEKI 362
+ A+ L + M + D V + TLLD G +D ++I
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 51/298 (17%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEE-EDTLCSDVVTWNSVLAGVVRNGEIRD 123
GF+ V+ N +I+ C+ G E K VF E L D T+ S+L + G++ +
Sbjct: 300 GFSPGVYTYNTVINGLCKHGK-YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 124 AEKVFDEMPERDVVS----WSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXX 179
EKVF +M RDVV +S+M+ + ++G L+ L F+ ++E G+ P+
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV------- 411
Query: 180 XXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRAL----FESISGK 235
+ T L+ Y + G I + L +
Sbjct: 412 ----------------------------IYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 236 DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNA-CSMGGLVSEGKRY 294
D+ T+N ++ GL + +A LF++ P + T +++ C +G L
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL-QNAMEL 502
Query: 295 FNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDA 349
F M + I+ ++ Y ++D + G +D A + M + P P+ ++ L++A
Sbjct: 503 FQKMKE-KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 117/316 (37%), Gaps = 62/316 (19%)
Query: 115 VVRNGEIRDAEKVFDEMPERDVVS---------------------WSTMIMGYVQNGLLE 153
+VR+G + DA+ M R VS + +I YVQ L
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 182
Query: 154 DGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALV 213
+ E F+++R KG + E V+ I I V +V
Sbjct: 183 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 242
Query: 214 DMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFI 269
+ K G +EK + K DI T+N +I +S GL ++A L + +GF
Sbjct: 243 NALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 302
Query: 270 PVNVTFVGVLNA-CSMG---------------GLVSEGKRYFNLMVDC------------ 301
P T+ V+N C G GL + Y +L+++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 302 ------YGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDACKV 352
+ P++ + M+ L R+G +D+A+ ++ + PD V++ L+
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 353 HGFVDMGEKIGNKLIQ 368
G + + + N+++Q
Sbjct: 423 KGMISVAMNLRNEMLQ 438
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRV--FEEEEDTLCSDVVTWNSVLAGVVRNGEIR 122
GF D N LI+ + + ++F V EEE+ L DV T+NS+L G R +++
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 123 DAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNE 171
+AE V +M ER D +++ MI G+V L + M ++G P++
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 168/422 (39%), Gaps = 51/422 (12%)
Query: 23 LRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCE 82
++R+ + KPN+H +T + + L ++V + G +R VF ALI+ Y
Sbjct: 131 MQRQIWCKPNEHIYTIMISLLGREGL--LDKCLEVFDEMPSQGVSRSVFSYTALINAYGR 188
Query: 83 CG---SSVESFKRVFEEE---------------------------------EDTLCSDVV 106
G +S+E R+ E+ + + D+V
Sbjct: 189 NGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIV 248
Query: 107 TWNSVLAGVVRNGEIRDAEKVFDEMPE----RDVVSWSTMIMGYVQNGLLEDGLECFSVM 162
T+N++L+ G +AE VF M + D+ ++S ++ + + LE + M
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM 308
Query: 163 REKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCI 222
G P+ + V +++ + L++++ + G
Sbjct: 309 ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRY 368
Query: 223 EKSRALF----ESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGV 278
+ R LF S + D T+N++I G K+ + LFH + E P T+ G+
Sbjct: 369 DDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGI 428
Query: 279 LNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM-TVE 337
+ AC GGL + ++ M I P + Y +++ +A L +EA+ TM V
Sbjct: 429 IFACGKGGLHEDARKILQYMT-ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 338 PDPVL--WATLLDACKVHGFVDMGEKIGNKLIQLD-PMHDGHYVQLAGIYAKARKWEDVV 394
+P + + +LL + G V E I ++L+ P + + Y + K+E+ V
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV 547
Query: 395 RV 396
+
Sbjct: 548 KT 549
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 140/312 (44%), Gaps = 60/312 (19%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
G +V N+LI C G ++ + + + E + +VVT+++++ V+ G++ +A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 125 EKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
EK++DEM +R D+ ++S++I G+ + L++ F +M K PN
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN---------- 394
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----D 236
V L+ + K +E+ LF +S + +
Sbjct: 395 -------------------------VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
T+N +I GL G A +F K +S+G P +T+ +L+ GL GK
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD-----GLCKYGKLEKA 484
Query: 297 LMVDCY----GIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDA 349
L+V Y ++P++ Y M++ + +AG V++ L +++ V+P+ +++ T+
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM--- 541
Query: 350 CKVHGFVDMGEK 361
+ GF G K
Sbjct: 542 --ISGFCRKGLK 551
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 133/325 (40%), Gaps = 36/325 (11%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECF 159
D+ T+ +V+ G+ + G+I A + +M E DVV ++T+I + D L F
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 160 SVMREKGIRPNEXXXXXXXXXXXXXXX-XECGRFVHSTIESLKFRITVPVGTALVDMYAK 218
+ M KGIRPN + R + IE K V +AL+D + K
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVK 337
Query: 219 CGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVT 274
G + ++ L++ + + DI+T++ +I G H +A +F +S+ P VT
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 275 FVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
+ ++ V EG F M G+ Y ++ L +AG D A + + M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 335 T---VEPDPVLWATLLDACKVHGFVDMGEKIGNKLIQLDPMHDGHYVQLAGIYAKARKWE 391
V PD + ++ LLD +G K+ L+ + Y + K E
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYG------KLEKALVVFE-------------YLQKSKME 497
Query: 392 DVVRVRKLMIE---KVSKKVAGWSL 413
+ +MIE K K GW L
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDL 522
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 144/350 (41%), Gaps = 17/350 (4%)
Query: 14 ESIAIYSAMLRRRRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVR 73
+++ ++ M++ R P+ F L A K L + + + L + D++
Sbjct: 63 DAVDLFGEMVQSRPL--PSIVEFNKLLSAIAKMNKFDLV--ISLGERMQNLRISYDLYSY 118
Query: 74 NALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEM-- 131
N LI+ +C + + + + D+VT +S+L G I +A + D+M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 132 --PERDVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXEC 189
+ + V+++T+I G + + + M +G +P+ +
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 190 GRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMIC 245
+ +E K V + T ++D + + LF + K ++ T+N +I
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 246 GLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQ 305
L ++G DA L + P VTF +++A G + E ++ ++ M+ I
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSID 357
Query: 306 PEMEHYGCMVDLLARAGLVDEAVHLIETMTVE---PDPVLWATLLDA-CK 351
P++ Y +++ +DEA H+ E M + P+ V + TL+ CK
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 123/282 (43%), Gaps = 9/282 (3%)
Query: 61 VVKLGFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGE 120
++KLGF D+ +LI+ +C E+ V + E + DVV + +++ + +NG
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 121 IRDAEKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXX 176
+ A +FD+M DVV +++++ G +G D M ++ I+P+
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 177 XXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK- 235
+++ + + + T+L++ + GC++++R +F + K
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 236 ---DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGK 292
D+ + +I G DA+ +F++ +G +T+ ++ G + +
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 293 RYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM 334
F+ MV G+ P + Y ++ L G V +A+ + E M
Sbjct: 373 EVFSHMVS-RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 134/322 (41%), Gaps = 53/322 (16%)
Query: 26 RRFVKPNQHTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGS 85
+R +KP+ TF + A K +++ ++++ A ++F +LI+ +C G
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGK--FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 86 SVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWST 141
E+ + + E DVV + S++ G + ++ DA K+F EM ++ + ++++T
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 142 MIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLK 201
+I G+ Q G E FS M +G+ PN
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPN------------------------------- 386
Query: 202 FRITVPVGTALVDMYAKC--GCIEKSRALFESISGK-------DIWTWNVMICGLASHGL 252
+ T V ++ C G ++K+ +FE + + +IWT+NV++ GL +G
Sbjct: 387 ------IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 253 AKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYG 312
+ AL +F +T+ ++ G V F + G++P + Y
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF-CSLPSKGVKPNVVTYT 499
Query: 313 CMVDLLARAGLVDEAVHLIETM 334
M+ L R GL EA L M
Sbjct: 500 TMISGLFREGLKHEAHVLFRKM 521
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 236 DIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYF 295
D++T N+++ A + K + GF P VTF ++N +G + E
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 296 NLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETMT---VEPDPVLWATLLDA 349
N MV+ GI+P++ Y ++D L + G V+ A+ L + M + PD V++ +L++
Sbjct: 166 NQMVE-MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 214 DMYAKCGCIEKSRALFESISGK--------DIWTWNVMICGLASHGLAKDALALFHKFLS 265
++ C C L S GK DI T+ +I G ++A+++ ++ +
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVD 325
G P V + ++++ G V+ F+ M + YGI+P++ Y +V+ L +G
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 326 EAVHLIETMT---VEPDPVLWATLLDACKVHG-FVDMGEKIGNKLIQL 369
+A L+ MT ++PD + + L+DA G F+D E++ N++I++
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD-AEELYNEMIRM 276
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 129/295 (43%), Gaps = 52/295 (17%)
Query: 65 GFARDVFVRNALIHLYCECGSSVESFKRVFEEEEDTLCSDVVTWNSVLAGVVRNGEIRDA 124
G +V N+LI+ C G ++ + + E + +VVT+N+++ + G++ +A
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 125 EKVFDEMPER----DVVSWSTMIMGYVQNGLLEDGLECFSVMREKGIRPNEXXXXXXXXX 180
EK+ +EM +R D ++++ +I G+ + L++ + F M K PN
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN---------- 397
Query: 181 XXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKCGCIEKSRALFESISGK----D 236
+ L++ + KC +E LF +S + +
Sbjct: 398 -------------------------IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 237 IWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVLNACSMGGLVSEGKRYFN 296
T+ +I G G A +F + +S +P ++ +L + GL S GK
Sbjct: 433 TVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR-VPTDIMTYSIL----LHGLCSYGKLDTA 487
Query: 297 LMVDCYGIQPEMEH----YGCMVDLLARAGLVDEAVHLIETMTVEPDPVLWATLL 347
L++ Y + EME Y M++ + +AG V EA L +++++PD V + T++
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMI 542
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 144/340 (42%), Gaps = 23/340 (6%)
Query: 34 HTFTFALHACTKRAASGLGSGVQVHAHVVKLGFARDVFVRNALIHLYCECGSSVESFKRV 93
+T++ ++ +R S L + V A ++KLG+ D+ ++L++ YC ++ V
Sbjct: 119 YTYSIFINCFCRR--SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 94 FEEEEDTLCSDVVTWNSVLAGVVRNGEIRDAEKVFDEMPER----DVVSWSTMIMGYVQN 149
+ E D T+ +++ G+ + + +A + D+M +R D+V++ T++ G +
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 150 GLLEDGLECFSVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVG 209
G ++ L + M I+ N E + + +E+ R V
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 210 TALVDMYAKCGCIEKSRALFESISGK----DIWTWNVMICGLASHGLAKDALALFHKFLS 265
+L++ G + L ++ K ++ T+N +I G +A L + +
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 266 EGFIPVNVTFVGVLNACSMGGLVSEGKRYFNLMV--DCYGIQPEMEHYGCMVDLLARAGL 323
P +T+ ++N M + E K+ F MV DC P ++ Y +++ +
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL---PNIQTYNTLINGFCKCKR 413
Query: 324 VDEAVHLIETMT---VEPDPVLWATLLDACKVHGFVDMGE 360
V++ V L M+ + + V + T+ + GF G+
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTI-----IQGFFQAGD 448
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 122/309 (39%), Gaps = 42/309 (13%)
Query: 104 DVVTWNSVLAGVVRNGEIRDAEKVFDEMP----ERDVVSWSTMIMGYVQNGLLEDGLECF 159
D+ T++ + R ++ A V +M E D+V+ S+++ GY + + D +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 160 SVMREKGIRPNEXXXXXXXXXXXXXXXXECGRFVHSTIESLKFRITVPVGTALVDMYAKC 219
M E G +P+ G F+H+ ALVD +
Sbjct: 177 DQMVEMGYKPDTFTFTTLIH----------GLFLHNKASE---------AVALVDQMVQR 217
Query: 220 GCIEKSRALFESISGKDIWTWNVMICGLASHGLAKDALALFHKFLSEGFIPVNVTFVGVL 279
GC D+ T+ ++ GL G AL L +K + V F ++
Sbjct: 218 GC------------QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 280 NACSMGGLVSEGKRYFNLMVDCYGIQPEMEHYGCMVDLLARAGLVDEAVHLIETM---TV 336
++ V F M + GI+P + Y +++ L G +A L+ M +
Sbjct: 266 DSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 337 EPDPVLWATLLDACKVHGFVDMGEKIGNKLIQ--LDPMHDGHYVQLAGIYAKARKWEDVV 394
P+ V + L+DA G + EK+ ++IQ +DP + + + G + + ++
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING-FCMHNRLDEAK 383
Query: 395 RVRKLMIEK 403
++ K M+ K
Sbjct: 384 QMFKFMVSK 392