Miyakogusa Predicted Gene
- Lj0g3v0092479.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0092479.1 Non Chatacterized Hit- tr|K4C866|K4C866_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,39.31,1e-18,no
description,Tify; seg,NULL; TIFY,Tify; tify,Tify; CCT_2,CO/COL/TOC1,
conserved site,CUFF.5071.1
(350 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17860.1 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain... 193 2e-49
AT3G17860.2 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain... 170 1e-42
AT3G17860.3 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain... 168 6e-42
AT1G48500.1 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain prote... 149 3e-36
AT1G48500.2 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain prote... 139 3e-33
AT1G48500.3 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain prote... 122 3e-28
AT1G70700.1 | Symbols: JAZ9, TIFY7 | TIFY domain/Divergent CCT m... 83 3e-16
AT1G70700.2 | Symbols: TIFY7 | TIFY domain/Divergent CCT motif f... 82 6e-16
>AT3G17860.1 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain
protein 3 | chr3:6119968-6122691 FORWARD LENGTH=352
Length = 352
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 182/366 (49%), Gaps = 60/366 (16%)
Query: 1 MERDFLGFSSKNGPRSIMKVDEANRTRDPMMGSGMQWSFSNKVPALPHQFLSFKTTQEER 60
MERDFLG SKN P ++ K + + +RD GM WSFSNKV A QFLSF+ TQE+R
Sbjct: 1 MERDFLGLGSKNSPITV-KEETSESSRDSAPNRGMNWSFSNKVSASSSQFLSFRPTQEDR 59
Query: 61 SRNSSISDPLASSGYMTISTKDAFDSNQK-PFLQKNLSIGKQAGNNHGMTVYPLQCSDVQ 119
R S S +M S D +DS +K P+
Sbjct: 60 HRKSGNYHLPHSGSFMPSSVADVYDSTRKAPY---------------------------- 91
Query: 120 SACLQEPRKFPVSNQSKQVSPVLQS-------NLATTGFNMVNSVIKPQPL-GSKSSATP 171
+ +Q R FP SNQ ++ + V S + A G + +N+ QPL G A P
Sbjct: 92 -SSVQGVRMFPNSNQHEETNAVSMSMPGFQSHHYAPGGRSFMNNNNNSQPLVGVPIMAPP 150
Query: 172 VSVLPPIGSIVGSTDLRNCSKSSGTPAQLTIFYGGSVCVFDDISPEKAKAVMLMAGNGSA 231
+S+LPP GSIVG+TD+R+ SK G+PAQLTIFY GSVCV+DDISPEKAKA+ML+AGNGS+
Sbjct: 151 ISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSS 210
Query: 232 ANQTLAVSKAKLQTEISAPSKNGXXXXXXXXXXXXXXXXXXXVTSHASSQPGRGSSGNNE 291
Q + + Q S+ S + G ++G
Sbjct: 211 MPQVFSPPQTHQQV---------VHHTRASVDSSAMPPSFMPTISYLSPEAGSSTNGLGA 261
Query: 292 LPMIRPAGPSTAPNNHSR----------SAATKMIQPG-GLPQARKASLARFLEKRKERV 340
R ST NN + S +T ++ P LP ARKASLARFLEKRKERV
Sbjct: 262 TKATR-GLTSTYHNNQANGSNINCPVPVSCSTNVMAPTVALPLARKASLARFLEKRKERV 320
Query: 341 ISTLPY 346
S PY
Sbjct: 321 TSVSPY 326
>AT3G17860.2 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain
protein 3 | chr3:6121083-6122691 FORWARD LENGTH=339
Length = 339
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 163/333 (48%), Gaps = 59/333 (17%)
Query: 34 GMQWSFSNKVPALPHQFLSFKTTQEERSRNSSISDPLASSGYMTISTKDAFDSNQK-PFL 92
GM WSFSNKV A QFLSF+ TQE+R R S S +M S D +DS +K P+
Sbjct: 20 GMNWSFSNKVSASSSQFLSFRPTQEDRHRKSGNYHLPHSGSFMPSSVADVYDSTRKAPY- 78
Query: 93 QKNLSIGKQAGNNHGMTVYPLQCSDVQSACLQEPRKFPVSNQSKQVSPVLQS-------N 145
+ +Q R FP SNQ ++ + V S +
Sbjct: 79 ----------------------------SSVQGVRMFPNSNQHEETNAVSMSMPGFQSHH 110
Query: 146 LATTGFNMVNSVIKPQPL-GSKSSATPVSVLPPIGSIVGSTDLRNCSKSSGTPAQLTIFY 204
A G + +N+ QPL G A P+S+LPP GSIVG+TD+R+ SK G+PAQLTIFY
Sbjct: 111 YAPGGRSFMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFY 170
Query: 205 GGSVCVFDDISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSKNGXXXXXXXXXX 264
GSVCV+DDISPEKAKA+ML+AGNGS+ Q + + Q
Sbjct: 171 AGSVCVYDDISPEKAKAIMLLAGNGSSMPQVFSPPQTHQQV---------VHHTRASVDS 221
Query: 265 XXXXXXXXXVTSHASSQPGRGSSGNNELPMIRPAGPSTAPNNHSR----------SAATK 314
S+ S + G ++G R ST NN + S +T
Sbjct: 222 SAMPPSFMPTISYLSPEAGSSTNGLGATKATR-GLTSTYHNNQANGSNINCPVPVSCSTN 280
Query: 315 MIQPG-GLPQARKASLARFLEKRKERVISTLPY 346
++ P LP ARKASLARFLEKRKERV S PY
Sbjct: 281 VMAPTVALPLARKASLARFLEKRKERVTSVSPY 313
>AT3G17860.3 | Symbols: JAZ3, JAI3, TIFY6B | jasmonate-zim-domain
protein 3 | chr3:6121143-6122691 FORWARD LENGTH=319
Length = 319
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/332 (38%), Positives = 162/332 (48%), Gaps = 59/332 (17%)
Query: 35 MQWSFSNKVPALPHQFLSFKTTQEERSRNSSISDPLASSGYMTISTKDAFDSNQK-PFLQ 93
M WSFSNKV A QFLSF+ TQE+R R S S +M S D +DS +K P+
Sbjct: 1 MNWSFSNKVSASSSQFLSFRPTQEDRHRKSGNYHLPHSGSFMPSSVADVYDSTRKAPY-- 58
Query: 94 KNLSIGKQAGNNHGMTVYPLQCSDVQSACLQEPRKFPVSNQSKQVSPVLQS-------NL 146
+ +Q R FP SNQ ++ + V S +
Sbjct: 59 ---------------------------SSVQGVRMFPNSNQHEETNAVSMSMPGFQSHHY 91
Query: 147 ATTGFNMVNSVIKPQPL-GSKSSATPVSVLPPIGSIVGSTDLRNCSKSSGTPAQLTIFYG 205
A G + +N+ QPL G A P+S+LPP GSIVG+TD+R+ SK G+PAQLTIFY
Sbjct: 92 APGGRSFMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFYA 151
Query: 206 GSVCVFDDISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSKNGXXXXXXXXXXX 265
GSVCV+DDISPEKAKA+ML+AGNGS+ Q + + Q
Sbjct: 152 GSVCVYDDISPEKAKAIMLLAGNGSSMPQVFSPPQTHQQV---------VHHTRASVDSS 202
Query: 266 XXXXXXXXVTSHASSQPGRGSSGNNELPMIRPAGPSTAPNNHSR----------SAATKM 315
S+ S + G ++G R ST NN + S +T +
Sbjct: 203 AMPPSFMPTISYLSPEAGSSTNGLGATKATR-GLTSTYHNNQANGSNINCPVPVSCSTNV 261
Query: 316 IQPG-GLPQARKASLARFLEKRKERVISTLPY 346
+ P LP ARKASLARFLEKRKERV S PY
Sbjct: 262 MAPTVALPLARKASLARFLEKRKERVTSVSPY 293
>AT1G48500.1 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain protein
4 | chr1:17931658-17934433 FORWARD LENGTH=310
Length = 310
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 170/352 (48%), Gaps = 67/352 (19%)
Query: 1 MERDFLGFSSKNGPRSIMKVDEANRTRDPMMGSGMQWSFSNKVPALPHQFLSFKTTQEER 60
MERDFLG SK P ++ +E N P G M WSFS+KV + P QFLSF T+Q+E
Sbjct: 1 MERDFLGLGSKLSPITVK--EETNEDSAPSRGM-MDWSFSSKVGSGP-QFLSFGTSQQE- 55
Query: 61 SRNSSISDPLASSGYMTISTKDAFDSNQKPFLQKNLSIGKQAGNNHGMTVYPLQCSDVQS 120
+R ++++D L SS A D NQ+ +
Sbjct: 56 TRVNTVNDHLLSSA--------AMDQNQRTYF---------------------------- 79
Query: 121 ACLQEPRKFPVSNQSKQVSPVLQSNLATTGFNMVNSVIKPQPLG-SKSSATPVSVLPPIG 179
+ LQE R FP S+Q Q + ++ + N +NS I Q LG S A PVSV P
Sbjct: 80 SSLQEDRVFPGSSQQDQTT----ITVSMSEPNYINSFINHQHLGGSPIMAPPVSVFP--- 132
Query: 180 SIVGSTDLRNCSKSSGTPAQLTIFYGGSVCVFDDISPEKAKAVMLMAGNGSAANQTLAVS 239
T +R+ SK P QLTIFY GSV V+ DI+PEKA+A+ML+AGNG A VS
Sbjct: 133 ---APTTIRSSSKP--LPPQLTIFYAGSVLVYQDIAPEKAQAIMLLAGNGPHAK---PVS 184
Query: 240 KAKLQTEISAPSKNGXXXXXXXXXXXXXXXXXXXVTSHASSQPGRGSSGNNEL-PMIRPA 298
+ K P K ++ S GS+G L P A
Sbjct: 185 QPK-------PQKLVHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTGLGPTKTKA 237
Query: 299 GPSTAPNNHSRSAATKMIQPGGLPQARKASLARFLEKRKERVISTLPYFKCN 350
++ NN ++AA M GLPQ RKASLARFLEKRKERVI+ PY+ N
Sbjct: 238 SLASTRNN--QTAAFSMAPTVGLPQTRKASLARFLEKRKERVINVSPYYVDN 287
>AT1G48500.2 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain protein
4 | chr1:17931658-17934255 FORWARD LENGTH=277
Length = 277
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 163/341 (47%), Gaps = 67/341 (19%)
Query: 1 MERDFLGFSSKNGPRSIMKVDEANRTRDPMMGSGMQWSFSNKVPALPHQFLSFKTTQEER 60
MERDFLG SK P ++ +E N P G M WSFS+KV + P QFLSF T+Q+E
Sbjct: 1 MERDFLGLGSKLSPITVK--EETNEDSAPSRGM-MDWSFSSKVGSGP-QFLSFGTSQQE- 55
Query: 61 SRNSSISDPLASSGYMTISTKDAFDSNQKPFLQKNLSIGKQAGNNHGMTVYPLQCSDVQS 120
+R ++++D L SS A D NQ+ +
Sbjct: 56 TRVNTVNDHLLSSA--------AMDQNQRTYF---------------------------- 79
Query: 121 ACLQEPRKFPVSNQSKQVSPVLQSNLATTGFNMVNSVIKPQPLG-SKSSATPVSVLPPIG 179
+ LQE R FP S+Q Q + ++ + N +NS I Q LG S A PVSV P
Sbjct: 80 SSLQEDRVFPGSSQQDQTT----ITVSMSEPNYINSFINHQHLGGSPIMAPPVSVFP--- 132
Query: 180 SIVGSTDLRNCSKSSGTPAQLTIFYGGSVCVFDDISPEKAKAVMLMAGNGSAANQTLAVS 239
T +R+ SK P QLTIFY GSV V+ DI+PEKA+A+ML+AGNG A VS
Sbjct: 133 ---APTTIRSSSKP--LPPQLTIFYAGSVLVYQDIAPEKAQAIMLLAGNGPHAK---PVS 184
Query: 240 KAKLQTEISAPSKNGXXXXXXXXXXXXXXXXXXXVTSHASSQPGRGSSGNNEL-PMIRPA 298
+ K P K ++ S GS+G L P A
Sbjct: 185 QPK-------PQKLVHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTGLGPTKTKA 237
Query: 299 GPSTAPNNHSRSAATKMIQPGGLPQARKASLARFLEKRKER 339
++ NN ++AA M GLPQ RKASLARFLEKRKER
Sbjct: 238 SLASTRNN--QTAAFSMAPTVGLPQTRKASLARFLEKRKER 276
>AT1G48500.3 | Symbols: JAZ4, TIFY6A | jasmonate-zim-domain protein
4 | chr1:17932994-17934255 FORWARD LENGTH=247
Length = 247
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 146/307 (47%), Gaps = 64/307 (20%)
Query: 35 MQWSFSNKVPALPHQFLSFKTTQEERSRNSSISDPLASSGYMTISTKDAFDSNQKPFLQK 94
M WSFS+KV + P QFLSF T+Q+E +R ++++D L SS A D NQ+ +
Sbjct: 2 MDWSFSSKVGSGP-QFLSFGTSQQE-TRVNTVNDHLLSSA--------AMDQNQRTYF-- 49
Query: 95 NLSIGKQAGNNHGMTVYPLQCSDVQSACLQEPRKFPVSNQSKQVSPVLQSNLATTGFNMV 154
+ LQE R FP S+Q Q + ++ + N +
Sbjct: 50 --------------------------SSLQEDRVFPGSSQQDQTT----ITVSMSEPNYI 79
Query: 155 NSVIKPQPLG-SKSSATPVSVLPPIGSIVGSTDLRNCSKSSGTPAQLTIFYGGSVCVFDD 213
NS I Q LG S A PVSV P T +R+ SK P QLTIFY GSV V+ D
Sbjct: 80 NSFINHQHLGGSPIMAPPVSVFP------APTTIRSSSKP--LPPQLTIFYAGSVLVYQD 131
Query: 214 ISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSKNGXXXXXXXXXXXXXXXXXXX 273
I+PEKA+A+ML+AGNG A VS+ K P K
Sbjct: 132 IAPEKAQAIMLLAGNGPHAK---PVSQPK-------PQKLVHHSLPTTDPPTMPPSFLPS 181
Query: 274 VTSHASSQPGRGSSGNNEL-PMIRPAGPSTAPNNHSRSAATKMIQPGGLPQARKASLARF 332
++ S GS+G L P A ++ NN ++AA M GLPQ RKASLARF
Sbjct: 182 ISYIVSETRSSGSNGVTGLGPTKTKASLASTRNN--QTAAFSMAPTVGLPQTRKASLARF 239
Query: 333 LEKRKER 339
LEKRKER
Sbjct: 240 LEKRKER 246
>AT1G70700.1 | Symbols: JAZ9, TIFY7 | TIFY domain/Divergent CCT
motif family protein | chr1:26654951-26656804 FORWARD
LENGTH=267
Length = 267
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 80/157 (50%), Gaps = 24/157 (15%)
Query: 193 SSGTPAQLTIFYGGSVCVFDDISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSK 252
SSG+ QLTIFYGG++ VF+DISP+KA+A+ML AGNG K +T S P +
Sbjct: 113 SSGSSPQLTIFYGGTISVFNDISPDKAQAIMLCAGNG-----------LKGETGDSKPVR 161
Query: 253 NGXXXXXXXXXXXXXXXXXXXV-TSHASSQPGRGSSGNNELPMIRPAGPSTAPNNHSRSA 311
T + S + N + MI S +A
Sbjct: 162 EAERMYGKQIHNTAATSSSSATHTDNFSRCRDTPVAATNAMSMI-----------ESFNA 210
Query: 312 ATKMIQPGGLPQARKASLARFLEKRKERVISTLPYFK 348
A + + P +PQARKASLARFLEKRKER++S +PY K
Sbjct: 211 APRNMIP-SVPQARKASLARFLEKRKERLMSAMPYKK 246
>AT1G70700.2 | Symbols: TIFY7 | TIFY domain/Divergent CCT motif
family protein | chr1:26654951-26656804 FORWARD
LENGTH=243
Length = 243
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 77/156 (49%), Gaps = 46/156 (29%)
Query: 193 SSGTPAQLTIFYGGSVCVFDDISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSK 252
SSG+ QLTIFYGG++ VF+DISP+KA+A+ML AGNG K +T S P +
Sbjct: 113 SSGSSPQLTIFYGGTISVFNDISPDKAQAIMLCAGNG-----------LKGETGDSKPVR 161
Query: 253 NGXXXXXXXXXXXXXXXXXXXVTSHASSQPGRGSSGNNELPMIRPAGPSTAPNNHSRSAA 312
+ N + MI S +AA
Sbjct: 162 EAERMCRDTPV-----------------------AATNAMSMI-----------ESFNAA 187
Query: 313 TKMIQPGGLPQARKASLARFLEKRKERVISTLPYFK 348
+ + P +PQARKASLARFLEKRKER++S +PY K
Sbjct: 188 PRNMIP-SVPQARKASLARFLEKRKERLMSAMPYKK 222