Miyakogusa Predicted Gene
- Lj0g3v0092449.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0092449.1 Non Chatacterized Hit- tr|I1L8J5|I1L8J5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26870
PE,35.76,3e-19,seg,NULL; Tetraspannin,Tetraspanin/Peripherin;
SUBFAMILY NOT NAMED,NULL; TETRASPANIN,NULL,CUFF.5063.1
(197 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G20740.1 | Symbols: | Tetraspanin family protein | chr2:8935... 216 9e-57
AT2G20740.2 | Symbols: | Tetraspanin family protein | chr2:8935... 169 1e-42
AT2G20230.1 | Symbols: | Tetraspanin family protein | chr2:8725... 110 9e-25
AT4G28770.2 | Symbols: | Tetraspanin family protein | chr4:1421... 105 3e-23
AT4G28770.1 | Symbols: | Tetraspanin family protein | chr4:1421... 104 3e-23
AT2G20740.3 | Symbols: | Tetraspanin family protein | chr2:8936... 88 4e-18
AT1G32400.3 | Symbols: TOM2A | tobamovirus multiplication 2A | c... 75 2e-14
AT1G32400.2 | Symbols: TOM2A | tobamovirus multiplication 2A | c... 75 2e-14
AT1G32400.1 | Symbols: TOM2A | tobamovirus multiplication 2A | c... 75 2e-14
>AT2G20740.1 | Symbols: | Tetraspanin family protein |
chr2:8935788-8937292 FORWARD LENGTH=221
Length = 221
Score = 216 bits (550), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 105/199 (52%), Positives = 130/199 (65%), Gaps = 5/199 (2%)
Query: 1 MQSILKRVNSVFGMAGLAMILYSAWMIRVWQRQMGELPFGHDSDYPPPWFIYTFLGLGVT 60
+QS+LK VNS+ GM G+AMILY+ W+IR WQ QMG LPF DSD+P PWFIY+FLGLG
Sbjct: 9 LQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPFA-DSDHPVPWFIYSFLGLGAI 67
Query: 61 FCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFLNREWEEDFPKDPSGNFD 120
CV+TC+GH+AAET NGCCLYLYM F+VLL M+E V D+FLNR+W++DFP+DPSG F
Sbjct: 68 LCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFH 127
Query: 121 QFKDFIRSNYEMCKWXXXXXXXXXXXXXXXXXXXXXXGPH-QXXXXXXXXXXPDRVPLLK 179
QF FI SN+++CKW GPH V LL+
Sbjct: 128 QFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQ 187
Query: 180 NA---PPYVVIDPVYGHGP 195
+A PPYVV +P+YG P
Sbjct: 188 DARQPPPYVVGEPMYGAKP 206
>AT2G20740.2 | Symbols: | Tetraspanin family protein |
chr2:8935911-8937292 FORWARD LENGTH=180
Length = 180
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 103/166 (62%), Gaps = 5/166 (3%)
Query: 34 MGELPFGHDSDYPPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIML 93
MG LPF DSD+P PWFIY+FLGLG CV+TC+GH+AAET NGCCLYLYM F+VLL M+
Sbjct: 1 MGNLPFA-DSDHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMV 59
Query: 94 EAAVTVDVFLNREWEEDFPKDPSGNFDQFKDFIRSNYEMCKWXXXXXXXXXXXXXXXXXX 153
E V D+FLNR+W++DFP+DPSG F QF FI SN+++CKW
Sbjct: 60 EGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAML 119
Query: 154 XXXXGPH-QXXXXXXXXXXPDRVPLLKNA---PPYVVIDPVYGHGP 195
GPH V LL++A PPYVV +P+YG P
Sbjct: 120 LKALGPHPHRHYDSDDEYNVSTVALLQDARQPPPYVVGEPMYGAKP 165
>AT2G20230.1 | Symbols: | Tetraspanin family protein |
chr2:8725762-8727388 FORWARD LENGTH=270
Length = 270
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 41/174 (23%)
Query: 3 SILKRVNSVFGMAGLAMILYSAWMIRVWQRQM---------------------------- 34
S LK +N V G+++I+YS WM+ + R +
Sbjct: 12 STLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSEPLKNPI 71
Query: 35 ------------GELPFGHDS-DYPPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLY 81
G+ F S D P PWFIY+F+ +G+ C++T G +AAE NGCCL
Sbjct: 72 DFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAINGCCLC 131
Query: 82 LYMVFVVLLIMLEAAVTVDVFLNREWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
Y + LLI+LEAA+ + ++R WE+D P DP+G + FI N ++CKW
Sbjct: 132 FYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKW 185
>AT4G28770.2 | Symbols: | Tetraspanin family protein |
chr4:14212177-14213896 REVERSE LENGTH=325
Length = 325
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%)
Query: 44 DYPPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFL 103
D P PWFIY F+ +G+ C++T G +AAE NGCCL Y + LLI++EAA+ + +
Sbjct: 149 DLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVI 208
Query: 104 NREWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
+R WE+D P DP+G + + FI N ++CKW
Sbjct: 209 DRHWEKDLPYDPTGELNSLRAFIEENIDICKW 240
>AT4G28770.1 | Symbols: | Tetraspanin family protein |
chr4:14212177-14213518 REVERSE LENGTH=281
Length = 281
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%)
Query: 44 DYPPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFL 103
D P PWFIY F+ +G+ C++T G +AAE NGCCL Y + LLI++EAA+ + +
Sbjct: 105 DLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVI 164
Query: 104 NREWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
+R WE+D P DP+G + + FI N ++CKW
Sbjct: 165 DRHWEKDLPYDPTGELNSLRAFIEENIDICKW 196
>AT2G20740.3 | Symbols: | Tetraspanin family protein |
chr2:8936713-8937292 FORWARD LENGTH=131
Length = 131
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 84 MVFVVLLIMLEAAVTVDVFLNREWEEDFPKDPSGNFDQFKDFIRSNYEMCKWXXXXXXXX 143
M F+VLL M+E V D+FLNR+W++DFP+DPSG F QF FI SN+++CKW
Sbjct: 1 MGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCV 60
Query: 144 XXXXXXXXXXXXXXGPH-QXXXXXXXXXXPDRVPLLKNA---PPYVVIDPVYGHGP 195
GPH V LL++A PPYVV +P+YG P
Sbjct: 61 QGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDARQPPPYVVGEPMYGAKP 116
>AT1G32400.3 | Symbols: TOM2A | tobamovirus multiplication 2A |
chr1:11689393-11690873 REVERSE LENGTH=280
Length = 280
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%)
Query: 44 DYPPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFL 103
+ P WFIY F+G+GV VI+C G V + + CCL Y + ++LLI++E +F
Sbjct: 75 NLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIFF 134
Query: 104 NREWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
+ W ++ P D +GNFD +F+R N+++ +W
Sbjct: 135 DNSWRDELPSDRTGNFDTIYNFLRENWKIVRW 166
>AT1G32400.2 | Symbols: TOM2A | tobamovirus multiplication 2A |
chr1:11689393-11690873 REVERSE LENGTH=280
Length = 280
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%)
Query: 44 DYPPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFL 103
+ P WFIY F+G+GV VI+C G V + + CCL Y + ++LLI++E +F
Sbjct: 75 NLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIFF 134
Query: 104 NREWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
+ W ++ P D +GNFD +F+R N+++ +W
Sbjct: 135 DNSWRDELPSDRTGNFDTIYNFLRENWKIVRW 166
>AT1G32400.1 | Symbols: TOM2A | tobamovirus multiplication 2A |
chr1:11689393-11690873 REVERSE LENGTH=280
Length = 280
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%)
Query: 44 DYPPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFL 103
+ P WFIY F+G+GV VI+C G V + + CCL Y + ++LLI++E +F
Sbjct: 75 NLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIFF 134
Query: 104 NREWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
+ W ++ P D +GNFD +F+R N+++ +W
Sbjct: 135 DNSWRDELPSDRTGNFDTIYNFLRENWKIVRW 166