Miyakogusa Predicted Gene

Lj0g3v0092249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0092249.1 Non Chatacterized Hit- tr|Q56WQ5|Q56WQ5_ARATH
Putative uncharacterized protein At1g19400
OS=Arabidop,70,3e-17,seg,NULL; 2-HYDROXYACID DEHYDROGENASE,NULL;
2-HYDROXYACID DEHYDROGENASE-RELATED,NULL,CUFF.5046.1
         (316 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19400.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   295   3e-80
AT1G19400.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   295   3e-80
AT1G75180.3 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   291   4e-79
AT1G75180.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   291   4e-79
AT1G75180.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   241   5e-64
AT1G01500.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase ...   174   6e-44

>AT1G19400.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:6712222-6713676 REVERSE LENGTH=303
          Length = 303

 Score =  295 bits (755), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 155/288 (53%), Positives = 196/288 (68%), Gaps = 21/288 (7%)

Query: 36  SSSWFDMRVFFVRVSGFQVDETTPEFLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLR 95
           SS W D+RVF+VR+S F V+++TPE L +NH PL PDTLLE+NGVR  MY+ EG SS LR
Sbjct: 30  SSPWLDLRVFYVRISNFVVEDSTPEVLTINHIPLDPDTLLEINGVRMGMYS-EGGSSQLR 88

Query: 96  RNRVDRKSEEATFVNTDSIRLTGSVKFEVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAK 155
           R+RVD+KSEEAT+V+TD+IRLTGSVKFEVYD  +  ++LSG LEMS  NGF  ES++   
Sbjct: 89  RDRVDKKSEEATYVSTDNIRLTGSVKFEVYDKNE--LVLSGTLEMSGSNGFTGESKN--- 143

Query: 156 KWSMNCHTEMTSNSGFFRGKHV-------AVPEIEVYVAGCFSGTPIILTKTLQLNCRKK 208
           +W MNC  E+T+ SGF + K +        +P IEVYV GCFSGTPIILTKTLQL  +KK
Sbjct: 144 RWKMNCEAEVTAGSGFLKEKSINGQELSSPLPTIEVYVTGCFSGTPIILTKTLQLGLKKK 203

Query: 209 HNRKCTLDVIPEYESAECHKDVPHNGLHLQVAAECRSFKPEHEGDFSSMYWQRTDSIDLE 268
            +R+  LD IPEYE+AE  KD  +  L LQ   E  ++K E+EGD   MYW R++ ID  
Sbjct: 204 QSRRMALDAIPEYETAEPQKDTSY-ALDLQATTEYGNYKEEYEGD---MYW-RSECID-- 256

Query: 269 EGELSWFNAXXXXXXXXXXXXXXXXXXXXSLLARSYQATTRSFKRRFI 316
            GE+SWFNA                     LL R+YQ+TTR+F+RR +
Sbjct: 257 -GEMSWFNAGVRVGVGIGLGVCVGLGIGVGLLVRTYQSTTRTFRRRLL 303


>AT1G19400.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:6712222-6713676 REVERSE LENGTH=303
          Length = 303

 Score =  295 bits (755), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 155/288 (53%), Positives = 196/288 (68%), Gaps = 21/288 (7%)

Query: 36  SSSWFDMRVFFVRVSGFQVDETTPEFLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLR 95
           SS W D+RVF+VR+S F V+++TPE L +NH PL PDTLLE+NGVR  MY+ EG SS LR
Sbjct: 30  SSPWLDLRVFYVRISNFVVEDSTPEVLTINHIPLDPDTLLEINGVRMGMYS-EGGSSQLR 88

Query: 96  RNRVDRKSEEATFVNTDSIRLTGSVKFEVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAK 155
           R+RVD+KSEEAT+V+TD+IRLTGSVKFEVYD  +  ++LSG LEMS  NGF  ES++   
Sbjct: 89  RDRVDKKSEEATYVSTDNIRLTGSVKFEVYDKNE--LVLSGTLEMSGSNGFTGESKN--- 143

Query: 156 KWSMNCHTEMTSNSGFFRGKHV-------AVPEIEVYVAGCFSGTPIILTKTLQLNCRKK 208
           +W MNC  E+T+ SGF + K +        +P IEVYV GCFSGTPIILTKTLQL  +KK
Sbjct: 144 RWKMNCEAEVTAGSGFLKEKSINGQELSSPLPTIEVYVTGCFSGTPIILTKTLQLGLKKK 203

Query: 209 HNRKCTLDVIPEYESAECHKDVPHNGLHLQVAAECRSFKPEHEGDFSSMYWQRTDSIDLE 268
            +R+  LD IPEYE+AE  KD  +  L LQ   E  ++K E+EGD   MYW R++ ID  
Sbjct: 204 QSRRMALDAIPEYETAEPQKDTSY-ALDLQATTEYGNYKEEYEGD---MYW-RSECID-- 256

Query: 269 EGELSWFNAXXXXXXXXXXXXXXXXXXXXSLLARSYQATTRSFKRRFI 316
            GE+SWFNA                     LL R+YQ+TTR+F+RR +
Sbjct: 257 -GEMSWFNAGVRVGVGIGLGVCVGLGIGVGLLVRTYQSTTRTFRRRLL 303


>AT1G75180.3 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:28216150-28217911 REVERSE
           LENGTH=315
          Length = 315

 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 171/323 (52%), Positives = 211/323 (65%), Gaps = 23/323 (7%)

Query: 6   PYEASSYNGESAHRILQMIKPSPYK-----PCTKLSSSWFDMRVFFVRVSGFQVDETTPE 60
           PYE  + NGE++    QMI+   Y        + LSS   D+RVF+VR+S F+VD +TPE
Sbjct: 4   PYETRN-NGEAS----QMIRYQSYNHHNSRLPSSLSSPLLDLRVFYVRISNFKVDHSTPE 58

Query: 61  FLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRRNRVDRKSEEATFVNTDSIRLTGSV 120
            L + H PL PD+LLE+NGVR SMY+ EG SS LRR+RVD+KSE ATF++TD+IRL+GSV
Sbjct: 59  VLTITHIPLDPDSLLEINGVRMSMYS-EGVSSQLRRDRVDKKSEVATFISTDNIRLSGSV 117

Query: 121 KFEVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAKKWSMNCHTEMTSNSGFFRGKHVA-- 178
           KFEVYD KD  VL SG LEMS  NGF  ES+ + K+W+MNC  E+T+ SGF + KH+   
Sbjct: 118 KFEVYD-KDELVL-SGTLEMSGSNGFTGESKHSVKRWNMNCEAEITAESGFLKEKHIGGS 175

Query: 179 -----VPEIEVYVAGCFSGTPIILTKTLQLNCRKKHNRKCTLDVIPEYESAECHKDVPHN 233
                +P IEVYV GCFSGTPIILTKTLQL  RKKH R   LD IPEYE+ E HK     
Sbjct: 176 ELSSPLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSIPEYETDEPHKGNSSE 235

Query: 234 GLHLQVAAECRSFKPEHEGDFSSMYWQRTDSIDLEEGELSWFNAXXXXXXXXXXXXXXXX 293
            L  QV  E  S+K E+EG+ S MYW R +  D E+GE+SWFNA                
Sbjct: 236 -LDYQV-TEYGSYKQEYEGEHSDMYWNR-EYADGEDGEMSWFNAGVRVGVGIGLGVCVGL 292

Query: 294 XXXXSLLARSYQATTRSFKRRFI 316
                LL R+YQ+TTR+F+RR I
Sbjct: 293 GIGVGLLVRTYQSTTRNFRRRII 315


>AT1G75180.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:28216150-28217911 REVERSE
           LENGTH=315
          Length = 315

 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 171/323 (52%), Positives = 211/323 (65%), Gaps = 23/323 (7%)

Query: 6   PYEASSYNGESAHRILQMIKPSPYK-----PCTKLSSSWFDMRVFFVRVSGFQVDETTPE 60
           PYE  + NGE++    QMI+   Y        + LSS   D+RVF+VR+S F+VD +TPE
Sbjct: 4   PYETRN-NGEAS----QMIRYQSYNHHNSRLPSSLSSPLLDLRVFYVRISNFKVDHSTPE 58

Query: 61  FLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRRNRVDRKSEEATFVNTDSIRLTGSV 120
            L + H PL PD+LLE+NGVR SMY+ EG SS LRR+RVD+KSE ATF++TD+IRL+GSV
Sbjct: 59  VLTITHIPLDPDSLLEINGVRMSMYS-EGVSSQLRRDRVDKKSEVATFISTDNIRLSGSV 117

Query: 121 KFEVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAKKWSMNCHTEMTSNSGFFRGKHVA-- 178
           KFEVYD KD  VL SG LEMS  NGF  ES+ + K+W+MNC  E+T+ SGF + KH+   
Sbjct: 118 KFEVYD-KDELVL-SGTLEMSGSNGFTGESKHSVKRWNMNCEAEITAESGFLKEKHIGGS 175

Query: 179 -----VPEIEVYVAGCFSGTPIILTKTLQLNCRKKHNRKCTLDVIPEYESAECHKDVPHN 233
                +P IEVYV GCFSGTPIILTKTLQL  RKKH R   LD IPEYE+ E HK     
Sbjct: 176 ELSSPLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSIPEYETDEPHKGNSSE 235

Query: 234 GLHLQVAAECRSFKPEHEGDFSSMYWQRTDSIDLEEGELSWFNAXXXXXXXXXXXXXXXX 293
            L  QV  E  S+K E+EG+ S MYW R +  D E+GE+SWFNA                
Sbjct: 236 -LDYQV-TEYGSYKQEYEGEHSDMYWNR-EYADGEDGEMSWFNAGVRVGVGIGLGVCVGL 292

Query: 294 XXXXSLLARSYQATTRSFKRRFI 316
                LL R+YQ+TTR+F+RR I
Sbjct: 293 GIGVGLLVRTYQSTTRNFRRRII 315


>AT1G75180.2 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:28216772-28217911 REVERSE
           LENGTH=243
          Length = 243

 Score =  241 bits (615), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 137/238 (57%), Positives = 167/238 (70%), Gaps = 20/238 (8%)

Query: 3   MEGPYEASSYNGESAHRILQMIKPSPYK-----PCTKLSSSWFDMRVFFVRVSGFQVDET 57
           M  PYE  + NGE++    QMI+   Y        + LSS   D+RVF+VR+S F+VD +
Sbjct: 1   MVEPYETRN-NGEAS----QMIRYQSYNHHNSRLPSSLSSPLLDLRVFYVRISNFKVDHS 55

Query: 58  TPEFLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRRNRVDRKSEEATFVNTDSIRLT 117
           TPE L + H PL PD+LLE+NGVR SMY+ EG SS LRR+RVD+KSE ATF++TD+IRL+
Sbjct: 56  TPEVLTITHIPLDPDSLLEINGVRMSMYS-EGVSSQLRRDRVDKKSEVATFISTDNIRLS 114

Query: 118 GSVKFEVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAKKWSMNCHTEMTSNSGFFRGKHV 177
           GSVKFEVYD KD  VL SG LEMS  NGF  ES+ + K+W+MNC  E+T+ SGF + KH+
Sbjct: 115 GSVKFEVYD-KDELVL-SGTLEMSGSNGFTGESKHSVKRWNMNCEAEITAESGFLKEKHI 172

Query: 178 A-------VPEIEVYVAGCFSGTPIILTKTLQLNCRKKHNRKCTLDVIPEYESAECHK 228
                   +P IEVYV GCFSGTPIILTKTLQL  RKKH R   LD IPEYE+ E HK
Sbjct: 173 GGSELSSPLPTIEVYVTGCFSGTPIILTKTLQLGFRKKHGRVTALDSIPEYETDEPHK 230


>AT1G01500.1 | Symbols:  | Erythronate-4-phosphate dehydrogenase
           family protein | chr1:185260-186573 FORWARD LENGTH=327
          Length = 327

 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/297 (38%), Positives = 165/297 (55%), Gaps = 26/297 (8%)

Query: 37  SSWFDMRVFFVRVSGFQVDETTPEFLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRR 96
           S+W ++R+F+VR++   V E  P+FL L H        LEVNGVR  + + +  S  LRR
Sbjct: 40  SAWLEVRLFYVRIAPCVV-ENVPDFLTLRHPRRETGASLEVNGVR--VPSSQTASLKLRR 96

Query: 97  NRVDRKSEEATFVNTDSIRLTGSVKFEVYDDKDHCVLLSGVLEMSNG---NGFVEESRSN 153
           +RVDR+S E T+V+T+++R+TG V FEVYD++D  ++L G L+   G   NG V + ++ 
Sbjct: 97  DRVDRESSEVTYVSTETVRVTGCVDFEVYDNED--MVLCGNLDRIEGAWNNGTVSDPKTG 154

Query: 154 AKKWSMNCHTEMT-------SNSGFFRGK-HVAVPEIEVYVAGCFSGTPIILTKTLQLNC 205
              W M+C+  M        S S FF+ K  V+ P +EVY+AGC  G P+ILTKT+Q + 
Sbjct: 155 ---WGMDCYIAMGNGHVSGPSASVFFQPKFGVSSPSVEVYIAGCCGGVPVILTKTIQASP 211

Query: 206 RKKHNRKCTLDVIPEYESAECHKDVPHNGLHLQVAAECRSFKPE-HEGDFSSM-----YW 259
           R+K  R  TLD IPE E     +D+   G  L   ++ +  + E  E D S M     Y+
Sbjct: 212 RRKVARHVTLDAIPEDEEVGKEQDIGTIGDELARQSKVQMMESEVDEYDDSDMKMAQRYY 271

Query: 260 QRTDSIDLEEGELSWFNAXXXXXXXXXXXXXXXXXXXXSLLARSYQATTRSFKRRFI 316
                +D E+G+LSWFNA                     LL RSYQATT + +RRF+
Sbjct: 272 PEGMYVD-EDGQLSWFNAGVRVGVGIGLGMCLGVGIGVGLLMRSYQATTSNLRRRFL 327