Miyakogusa Predicted Gene
- Lj0g3v0092139.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0092139.1 tr|F2E5W0|F2E5W0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,90,0.000000003,seg,NULL;
coiled-coil,NULL,CUFF.5035.1
(711 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G15095.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 110 4e-24
AT3G15095.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 75 1e-13
AT3G15095.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 75 1e-13
>AT3G15095.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; Has 9762 Blast hits to 6439 proteins in
764 species: Archae - 77; Bacteria - 1339; Metazoa -
3211; Fungi - 718; Plants - 437; Viruses - 131; Other
Eukaryotes - 3849 (source: NCBI BLink). |
chr3:5081996-5084050 FORWARD LENGTH=684
Length = 684
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 127/305 (41%), Gaps = 62/305 (20%)
Query: 72 NGSMKGGQA----SPMFPTNG--KRRGCGFENP--------EPSSPKVTCIGQVRVKTKK 117
+GS+K A SPMF NG KR G G+EN EPSSPKVTCIGQVRVKT+K
Sbjct: 68 SGSLKNASAGVLNSPMFGANGGRKRSGSGYENSNNNNNNNIEPSSPKVTCIGQVRVKTRK 127
Query: 118 Q-GKKMRARSKRR-GEASFRKVAEMQGFQXXXXXXXXPDLTRQNSQSSFGFQNHSQSLQQ 175
KKMRARS+R+ GE SFR+ + QN G +
Sbjct: 128 HVKKKMRARSRRKGGENSFRRSVD------------------QNDGGG-GCR-------- 160
Query: 176 ECLKHRNQRWVHLPLTICEALREXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 234
K R VHLP+TICE+LR
Sbjct: 161 --FKASENRLVHLPVTICESLRSFGSELNCFFPCRSSCTENSHGDGRRAESNNDGCGGGG 218
Query: 235 XXXXXXXAALARWLVTLQEGDGKGRGIXXXXXXXXXXXXXXXXXXXXXXXRSQNRSQRRH 294
A RW V ++E G R + RS+RRH
Sbjct: 219 GGSNSCGAVFTRWFVAVEETSGGKR-----------REIELVVGGEDEVEEDRRRSRRRH 267
Query: 295 VFEDIDIDLVXXXXXXXXXXXXXXXXXXXRVSICIPPKNALLLMRCRSDPVKMAALANRF 354
VFE +D+ + R+SIC PPKNALLLMRCRSDPVK+AALANR
Sbjct: 268 VFEGLDLSEI-----EMKTEKKERGEEVGRMSICSPPKNALLLMRCRSDPVKVAALANRV 322
Query: 355 WESPL 359
E L
Sbjct: 323 RERQL 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 37/42 (88%)
Query: 580 ETLPECLLLMMCEPKLSMEVSKETWVCSTDFIRRLPGKTAVK 621
+ LP+CLLLMMCEPKLSMEVSKETWVCSTDF+R LPG+ K
Sbjct: 520 KVLPDCLLLMMCEPKLSMEVSKETWVCSTDFVRCLPGRPPAK 561
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Query: 654 EQKLVGSHNGYEPFVLTRCKSEPMRSAAKLAPEACFWNNRKLEPTAP 700
EQ++ G+ N +P VL RCKSEP +SA+KLAPEACFW NRKLEP P
Sbjct: 627 EQRVAGA-NKVQPPVLPRCKSEPRKSASKLAPEACFWKNRKLEPHPP 672
>AT3G15095.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has
30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr3:5082830-5084050
FORWARD LENGTH=406
Length = 406
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 37/42 (88%)
Query: 580 ETLPECLLLMMCEPKLSMEVSKETWVCSTDFIRRLPGKTAVK 621
+ LP+CLLLMMCEPKLSMEVSKETWVCSTDF+R LPG+ K
Sbjct: 242 KVLPDCLLLMMCEPKLSMEVSKETWVCSTDFVRCLPGRPPAK 283
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Query: 654 EQKLVGSHNGYEPFVLTRCKSEPMRSAAKLAPEACFWNNRKLEPTAP 700
EQ++ G+ N +P VL RCKSEP +SA+KLAPEACFW NRKLEP P
Sbjct: 349 EQRVAGA-NKVQPPVLPRCKSEPRKSASKLAPEACFWKNRKLEPHPP 394
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 324 RVSICIPPKNALLLMRCRSDPVKMAALANRFWESPL 359
R+SIC PPKNALLLMRCRSDPVK+AALANR E L
Sbjct: 14 RMSICSPPKNALLLMRCRSDPVKVAALANRVRERQL 49
>AT3G15095.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 9396
Blast hits to 6248 proteins in 757 species: Archae - 72;
Bacteria - 1337; Metazoa - 3078; Fungi - 696; Plants -
406; Viruses - 135; Other Eukaryotes - 3672 (source:
NCBI BLink). | chr3:5082392-5084050 FORWARD LENGTH=552
Length = 552
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 36/41 (87%)
Query: 581 TLPECLLLMMCEPKLSMEVSKETWVCSTDFIRRLPGKTAVK 621
LP+CLLLMMCEPKLSMEVSKETWVCSTDF+R LPG+ K
Sbjct: 389 VLPDCLLLMMCEPKLSMEVSKETWVCSTDFVRCLPGRPPAK 429
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Query: 654 EQKLVGSHNGYEPFVLTRCKSEPMRSAAKLAPEACFWNNRKLEPTAP 700
EQ++ G+ N +P VL RCKSEP +SA+KLAPEACFW NRKLEP P
Sbjct: 495 EQRVAGA-NKVQPPVLPRCKSEPRKSASKLAPEACFWKNRKLEPHPP 540
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 68/183 (37%), Gaps = 17/183 (9%)
Query: 178 LKHRNQRWVHLPLTICEALREXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXX 236
K R VHLP+TICE+LR
Sbjct: 29 FKASENRLVHLPVTICESLRSFGSELNCFFPCRSSCTENSHGDGRRAESNNDGCGGGGGG 88
Query: 237 XXXXXAALARWLVTLQEGDGKGRGIXXXXXXXXXXXXXXXXXXXXXXXRSQNRSQRRHVF 296
A RW V ++E G R + RS+RRHVF
Sbjct: 89 SNSCGAVFTRWFVAVEETSGGKR-----------REIELVVGGEDEVEEDRRRSRRRHVF 137
Query: 297 EDIDIDLVXXXXXXXXXXXXXXXXXXXRVSICIPPKNALLLMRCRSDPVKMAALANRFWE 356
E +D+ + R+SIC PPKNALLLMRCRSDPVK+AALANR E
Sbjct: 138 EGLDLSEIEMKTEKKERGEEVG-----RMSICSPPKNALLLMRCRSDPVKVAALANRVRE 192
Query: 357 SPL 359
L
Sbjct: 193 RQL 195