Miyakogusa Predicted Gene

Lj0g3v0091689.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0091689.1 tr|E9LK41|E9LK41_VITVI Copper transporter
OS=Vitis vinifera GN=CTr4 PE=2 SV=1,41.67,2e-19,seg,NULL; Ctr,Ctr
copper transporter; COPPER TRANSPORTER,NULL; SOLUTE CARRIER FAMILY 31
(COPPER TRAN,CUFF.5004.1
         (160 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G59030.1 | Symbols: COPT1 | copper transporter 1 | chr5:23833...    99   1e-21
AT3G46900.1 | Symbols: COPT2 | copper transporter 2 | chr3:17268...    99   1e-21
AT2G26975.1 | Symbols:  | Ctr copper transporter family | chr2:1...    99   1e-21
AT5G59040.1 | Symbols: COPT3 | copper transporter 3 | chr5:23836...    95   2e-20
AT2G37925.1 | Symbols: COPT4 | copper transporter 4 | chr2:15870...    92   2e-19
AT5G20650.1 | Symbols: COPT5 | copper transporter 5 | chr5:69854...    52   2e-07

>AT5G59030.1 | Symbols: COPT1 | copper transporter 1 |
           chr5:23833945-23834457 REVERSE LENGTH=170
          Length = 170

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 3/103 (2%)

Query: 37  YWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLIKRRTTPI---VGALTQ 93
           +WGK+  VLFS WP  S GMY L ++ VFFLA+L E L++  L++  T         L Q
Sbjct: 47  FWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQ 106

Query: 94  ATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFFFAQSR 136
              Y  RI  +YLVMLAVMSFN G+F+ A+AGHA+GF    S+
Sbjct: 107 TAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQ 149


>AT3G46900.1 | Symbols: COPT2 | copper transporter 2 |
           chr3:17268887-17269363 FORWARD LENGTH=158
          Length = 158

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 37  YWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLIK-RRTTPIVGALTQAT 95
           +WGK+  VLFS WP  S GMY L ++++F LA++AE L++ P+++   +T     L Q  
Sbjct: 35  FWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTA 94

Query: 96  TYVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFF 131
            Y  +   SYLVMLAVMSFN G+FI A+AG+ +GFF
Sbjct: 95  VYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFF 130


>AT2G26975.1 | Symbols:  | Ctr copper transporter family |
           chr2:11512992-11513429 FORWARD LENGTH=145
          Length = 145

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/107 (44%), Positives = 69/107 (64%), Gaps = 1/107 (0%)

Query: 32  MRMNLYWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLIK-RRTTPIVGA 90
           M M  +WGK+  +LFS WP  S+GMY+L +++VF LA++ E L++  +++ R +T     
Sbjct: 25  MHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKG 84

Query: 91  LTQATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFFFAQSRA 137
           L Q   Y  +   +YLVMLAVMSFN G+FI A+AG A+GF    S A
Sbjct: 85  LVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTA 131


>AT5G59040.1 | Symbols: COPT3 | copper transporter 3 |
           chr5:23836724-23837179 FORWARD LENGTH=151
          Length = 151

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 62/107 (57%)

Query: 32  MRMNLYWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLIKRRTTPIVGAL 91
           M M  +WGK   VLF  WP  S+ MY + + ++F ++  +E LS    +K     + G L
Sbjct: 30  MHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGL 89

Query: 92  TQATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFFFAQSRAL 138
            Q   Y  R + SYLVMLAVMSFN G+F+AA+AG  LGF    SRA 
Sbjct: 90  LQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAF 136


>AT2G37925.1 | Symbols: COPT4 | copper transporter 4 |
           chr2:15870258-15870695 REVERSE LENGTH=145
          Length = 145

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 64/107 (59%), Gaps = 3/107 (2%)

Query: 35  NLYWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVL---SNQPLIKRRTTPIVGAL 91
             YWG +  VLFS WP    GMY LA++ VFFLA LAE L   S+   IK+    +    
Sbjct: 33  TFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAKVA 92

Query: 92  TQATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFFFAQSRAL 138
            +   Y  +  FSYLV+LAV+SFN G+F+AA+ GHALGF   + RA 
Sbjct: 93  FRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAF 139


>AT5G20650.1 | Symbols: COPT5 | copper transporter 5 |
           chr5:6985481-6985921 REVERSE LENGTH=146
          Length = 146

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 25/124 (20%)

Query: 32  MRMNLYWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQ-------------- 77
           M M  YWG  A +LF  W   S   Y+L ++  F  +   + L N+              
Sbjct: 2   MHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRAP 61

Query: 78  -----------PLIKRRTTPIVGALTQATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGH 126
                      PLI +  T           +    +  YL+MLA MSFN G+FIA V G 
Sbjct: 62  PPPRSSSGVSAPLIPKSGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIVVGL 121

Query: 127 ALGF 130
             G+
Sbjct: 122 TAGY 125