Miyakogusa Predicted Gene

Lj0g3v0091309.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0091309.1 Non Chatacterized Hit- tr|I1JNN2|I1JNN2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20503
PE,84.44,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; COLON CANCER-ASSOCIATED
PROTEIN MIC1,NULL; Mic1,Colon cancer-ass,CUFF.4992.1
         (735 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12010.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   799   0.0  

>AT3G12010.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; EXPRESSED IN:
           sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s:
           Colon cancer-associated Mic1-like (InterPro:IPR009755);
           Has 30201 Blast hits to 17322 proteins in 780 species:
           Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
           3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
           2996 (source: NCBI BLink). | chr3:3821337-3825537
           FORWARD LENGTH=682
          Length = 682

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/720 (55%), Positives = 516/720 (71%), Gaps = 47/720 (6%)

Query: 16  GSDGLSHAYIQYPPLRCNIPGSRDLFYDDGNKLLLSPTADQIFSWKVSPFDPFVGPSTDS 75
           GS  LSH YI +P LRCNIP S  LFYDD N+LL+  T+ Q+FSW+ SPF+P V PS DS
Sbjct: 10  GSGALSHVYIHHPSLRCNIPESNGLFYDDANRLLICTTSSQVFSWETSPFNPDVPPSVDS 69

Query: 76  ISEGPVIAIRYSLDMKVIAIQRSNHEIQLWDKETGEFFSHKCKPESESILGFFWTDSQQC 135
           ISEGP+++IR+SLD K IA+QRS+ EIQL+++ET +  +HKCK  SESILGFFW+DS  C
Sbjct: 70  ISEGPILSIRFSLDKKAIAVQRSDCEIQLFNRETKQILNHKCKAGSESILGFFWSDSPLC 129

Query: 136 DIVLVKTSGLDMYAYSSASKSLQLVETKKLTVSWYVYTHESRLVLLASGMQCKTFHGFQI 195
           D+ +VKTSG+D++A  S   SL+LVETKK  V+WY+YTHE+RLVLLASG+QCKTF+GFQ+
Sbjct: 130 DLAIVKTSGMDLFACDSMLNSLRLVETKKANVNWYIYTHETRLVLLASGLQCKTFNGFQL 189

Query: 196 SSADIVRLPRFEMVMAKSEANSKPVLAVEDIFIVTVYGRIYCLQVDRVAMLLHLYRLYRD 255
           S+A +VRLPRFEM MA+SE+NSKP+L+  D+ +VTVYGRIYCLQVDR AMLLHLYR YRD
Sbjct: 190 STAGVVRLPRFEMTMARSESNSKPILSAGDLHLVTVYGRIYCLQVDREAMLLHLYRFYRD 249

Query: 256 AVIQQGSLPIYSSRIAVSVVDSVLLIHQVDAKVVILYDLFIDSRAPISAPLPLLLRGFPX 315
           AV+QQGSLPIYSS+++V+VVD++LL+HQ+DAKVVI+YDLF+DSRAP+SAPLPLL RG+  
Sbjct: 250 AVVQQGSLPIYSSKLSVNVVDNLLLVHQIDAKVVIIYDLFVDSRAPVSAPLPLLWRGYQV 309

Query: 316 XXXXXXXXXXXXXXXDGNVVRSHEAVTYADTWIFLVPDLVCDVANKIIWKFNLDLDAISA 375
                            +   +   V Y D W FLVPDL+ D  NK++WK +LDL+AISA
Sbjct: 310 SETSSQAVNKEIESS-ESSTSNENIVMYEDGWTFLVPDLILDQTNKVLWKIHLDLEAISA 368

Query: 376 SNSEVPSVLEFLQRRKLEANKAKQLCLDITRTLILEHRPVSVVSKAINVLVTSYAHSIKT 435
           S+S+  S+LEFLQRRKLEANKAKQLCL I R +ILE RP + V++AI+VLVT+Y++S+K 
Sbjct: 369 SSSDRTSLLEFLQRRKLEANKAKQLCLGIARAIILERRPATQVTQAIDVLVTAYSYSVKA 428

Query: 436 GSYLKVLKPERTPASGVPNSSADVSATETGATGKSIISETTARIDSGSLIKAXXXXXXXX 495
           G+Y ++     T ++  P +S D  +     +G +I  E    + SGS            
Sbjct: 429 GTYKEIKNENATASTPTPGASPD--SERHRQSGSNIDEEVEMNLSSGS------------ 474

Query: 496 XXANPNRNSEEAIVGGTVNNGNSLITEAHPDHDMXXXXXXXXXXXXXTSAAISPDEMYSF 555
                                N    +   +  +             +S AISPDE+Y F
Sbjct: 475 -------------------QENMFCADEQQESQL-------------SSPAISPDELYKF 502

Query: 556 VFSPVDEEMVGDPSYLVAIIIEFLYSANLEKVRVHPNLYVLIVQLLARNERYAELGLFVI 615
           VF+ V+E MV +  YLVAII EFL S + EK++V  N+YV+ ++LLA ++R+AEL LF  
Sbjct: 503 VFTSVEEMMVEESEYLVAIITEFLRSISAEKLKVDLNIYVMTIKLLAYSKRFAELSLFTT 562

Query: 616 NKILEPSKEVALQLRESGRQDTQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARK 675
           NKI+EPSKEVA QL +SGRQ+ + RKLGLDMLRQL LHHDY+  LVQDGYYLEALRYA+K
Sbjct: 563 NKIIEPSKEVAFQLLDSGRQNIRVRKLGLDMLRQLSLHHDYISSLVQDGYYLEALRYAQK 622

Query: 676 YRVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFGNTSEYNRYYRILNELNSSLTV 735
           ++V ++R S+FLEAAF SND QHLAA+LR  ++ +PGF  TSEY  +Y +LN+ +SS+ V
Sbjct: 623 HKVTSVRSSMFLEAAFASNDMQHLAAILRVLSELIPGFKETSEYYTFYGLLNDTSSSVAV 682