Miyakogusa Predicted Gene

Lj0g3v0091189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0091189.1 gi|27753608|dbj|AB099699.1|.path1.1
         (282 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23670.2 | Symbols: LCB2 | long chain base2 | chr5:7981889-79...   501   e-142
AT5G23670.1 | Symbols: LCB2 | long chain base2 | chr5:7981889-79...   501   e-142
AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransferas...   490   e-139
AT3G48790.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...   221   5e-58
AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain...    79   3e-15
AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain...    79   3e-15
AT5G04620.2 | Symbols: ATBIOF, BIOF | biotin F | chr5:1327292-13...    55   6e-08
AT5G04620.1 | Symbols: ATBIOF, BIOF | biotin F | chr5:1328004-13...    51   1e-06

>AT5G23670.2 | Symbols: LCB2 | long chain base2 |
           chr5:7981889-7985037 FORWARD LENGTH=489
          Length = 489

 Score =  501 bits (1290), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 232/279 (83%), Positives = 252/279 (90%)

Query: 1   MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLY 60
           MI IPYLTA++TYFSYGLLFAFGQ RDFFR+  DW  ++NLQGYAPICLG EDFYIRRLY
Sbjct: 1   MITIPYLTAVSTYFSYGLLFAFGQLRDFFRRFIDWWFTSNLQGYAPICLGHEDFYIRRLY 60

Query: 61  LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLKRTDKLSRCLNLGSYNYLGFAASDEYC 120
            RIQDCF RPI+SAPDAWFDVVERYSNDNNKTLKRT K SRCLNLGSYNYLGF + DEYC
Sbjct: 61  HRIQDCFERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120

Query: 121 TPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASFVRKPAALVFGMGYVTNSAILPV 180
           TPRVI+SLKK+S STCS+RVD GTT +H ELEECV  FV KPAA+VFGMGY TNSAI+PV
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFVGKPAAVVFGMGYATNSAIIPV 180

Query: 181 LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHRPWK 240
           L+GKG LIISDSLNH+SIVNGARGSGATIRVFQHN PSHLE VLREQIAEGQPRTHRPWK
Sbjct: 181 LIGKGGLIISDSLNHSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHRPWK 240

Query: 241 KIMVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAQ 279
           KI+V+VEGIYSMEGE+C LPE++AICKKYKAY YLDEA 
Sbjct: 241 KIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAH 279


>AT5G23670.1 | Symbols: LCB2 | long chain base2 |
           chr5:7981889-7985037 FORWARD LENGTH=489
          Length = 489

 Score =  501 bits (1290), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 232/279 (83%), Positives = 252/279 (90%)

Query: 1   MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLY 60
           MI IPYLTA++TYFSYGLLFAFGQ RDFFR+  DW  ++NLQGYAPICLG EDFYIRRLY
Sbjct: 1   MITIPYLTAVSTYFSYGLLFAFGQLRDFFRRFIDWWFTSNLQGYAPICLGHEDFYIRRLY 60

Query: 61  LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLKRTDKLSRCLNLGSYNYLGFAASDEYC 120
            RIQDCF RPI+SAPDAWFDVVERYSNDNNKTLKRT K SRCLNLGSYNYLGF + DEYC
Sbjct: 61  HRIQDCFERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120

Query: 121 TPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASFVRKPAALVFGMGYVTNSAILPV 180
           TPRVI+SLKK+S STCS+RVD GTT +H ELEECV  FV KPAA+VFGMGY TNSAI+PV
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFVGKPAAVVFGMGYATNSAIIPV 180

Query: 181 LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHRPWK 240
           L+GKG LIISDSLNH+SIVNGARGSGATIRVFQHN PSHLE VLREQIAEGQPRTHRPWK
Sbjct: 181 LIGKGGLIISDSLNHSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHRPWK 240

Query: 241 KIMVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAQ 279
           KI+V+VEGIYSMEGE+C LPE++AICKKYKAY YLDEA 
Sbjct: 241 KIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAH 279


>AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransferase 1
           | chr3:18089346-18092276 FORWARD LENGTH=489
          Length = 489

 Score =  490 bits (1261), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 225/279 (80%), Positives = 250/279 (89%)

Query: 1   MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLY 60
           MI IPYLTA++TYFSYGLLFAFGQ RD+ R IFDW  +NNLQGYAPICL  EDFYIRRLY
Sbjct: 1   MITIPYLTAVSTYFSYGLLFAFGQLRDYSRLIFDWWRTNNLQGYAPICLAHEDFYIRRLY 60

Query: 61  LRIQDCFGRPIASAPDAWFDVVERYSNDNNKTLKRTDKLSRCLNLGSYNYLGFAASDEYC 120
            RIQDCFGRPI+SAPDAW DVVER S+DNNKTLKRT K SRCLNLGSYNYLGF + DEYC
Sbjct: 61  HRIQDCFGRPISSAPDAWIDVVERVSDDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC 120

Query: 121 TPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASFVRKPAALVFGMGYVTNSAILPV 180
           TPRVI+SLKK+S STCS+RVD GTT +H ELE+CVA +V +PAA++FGMGY TNSAI+PV
Sbjct: 121 TPRVIESLKKFSASTCSSRVDAGTTSVHAELEDCVAKYVGQPAAVIFGMGYATNSAIIPV 180

Query: 181 LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHRPWK 240
           L+GKG LIISDSLNH SIVNGARGSGATIRVFQHN P HLE+VL+EQIAEGQPRTHRPWK
Sbjct: 181 LIGKGGLIISDSLNHTSIVNGARGSGATIRVFQHNTPGHLEKVLKEQIAEGQPRTHRPWK 240

Query: 241 KIMVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAQ 279
           KI+V+VEGIYSMEGE+C LPEI++ICKKYKAY YLDEA 
Sbjct: 241 KIIVVVEGIYSMEGEICHLPEIVSICKKYKAYVYLDEAH 279


>AT3G48790.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr3:18093404-18095181 FORWARD LENGTH=350
          Length = 350

 Score =  221 bits (562), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 102/137 (74%), Positives = 117/137 (85%), Gaps = 7/137 (5%)

Query: 143 GTTDLHNELEECVASFVRKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGA 202
           GTT +H ELEECVA FV KPAA+VFGMGY+TNSAI+ VL+GKG LIISDSLNH SI+NGA
Sbjct: 7   GTTAVHGELEECVAKFVGKPAAVVFGMGYLTNSAIISVLIGKGGLIISDSLNHTSIINGA 66

Query: 203 RGSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKLPEI 262
           RGSGATIRVFQHN       +L+E I EGQPRTHRPWKKI+V+VEGIYSMEGE+C LPEI
Sbjct: 67  RGSGATIRVFQHN-------ILKEHIIEGQPRTHRPWKKIIVVVEGIYSMEGEICDLPEI 119

Query: 263 IAICKKYKAYTYLDEAQ 279
           +++C +YKAY YLDEA 
Sbjct: 120 VSVCSEYKAYVYLDEAH 136


>AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain
           base1 | chr4:17218598-17221124 FORWARD LENGTH=482
          Length = 482

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 102 CLNLGSYNYLGFAASD---EYCTPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASF 158
            +N  S NYLG    +   E CT     +L+KY   +C  R   GT D+H + E  ++ F
Sbjct: 111 VVNFASANYLGLIGHEKLLESCT----SALEKYGVGSCGPRGFYGTIDVHLDCETRISKF 166

Query: 159 VRKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMPS 218
           +  P ++++  G  T  + +P    KG +I++D   H  I NG + S +TI  F+HN   
Sbjct: 167 LGTPDSILYSYGLSTMFSTIPCFCKKGDVIVADEGVHWGIQNGLQLSRSTIVYFKHNDME 226

Query: 219 HLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEA 278
            L   L E+I     R+    + I  + E +Y   G++  L EI+ + +KY+    LDE+
Sbjct: 227 SLRITL-EKIMTKYKRSKNLRRYI--VAEAVYQNSGQIAPLDEIVKLKEKYRFRVILDES 283

Query: 279 Q 279
            
Sbjct: 284 N 284


>AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain
           base1 | chr4:17218598-17221124 FORWARD LENGTH=482
          Length = 482

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 102 CLNLGSYNYLGFAASD---EYCTPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASF 158
            +N  S NYLG    +   E CT     +L+KY   +C  R   GT D+H + E  ++ F
Sbjct: 111 VVNFASANYLGLIGHEKLLESCT----SALEKYGVGSCGPRGFYGTIDVHLDCETRISKF 166

Query: 159 VRKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMPS 218
           +  P ++++  G  T  + +P    KG +I++D   H  I NG + S +TI  F+HN   
Sbjct: 167 LGTPDSILYSYGLSTMFSTIPCFCKKGDVIVADEGVHWGIQNGLQLSRSTIVYFKHNDME 226

Query: 219 HLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEA 278
            L   L E+I     R+    + I  + E +Y   G++  L EI+ + +KY+    LDE+
Sbjct: 227 SLRITL-EKIMTKYKRSKNLRRYI--VAEAVYQNSGQIAPLDEIVKLKEKYRFRVILDES 283

Query: 279 Q 279
            
Sbjct: 284 N 284


>AT5G04620.2 | Symbols: ATBIOF, BIOF | biotin F |
           chr5:1327292-1329934 FORWARD LENGTH=476
          Length = 476

 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 29/203 (14%)

Query: 95  RTDKLSRCLNLGSYNYLGFAASDEYCTPRVIDSLKKYSPSTCSARVDGGTTDLHNELEEC 154
           R  +  + L     +YLG + S    +    +++K+Y      + +  G T  H  LE  
Sbjct: 97  RKGRFKKLLLFSGNDYLGLS-SHPTISNAAANAVKEYGMGPKGSALICGYTTYHRLLESS 155

Query: 155 VASFVRKPAALVFGMGYVTNSAILPVLMGKGSL--------------IISDSLNHNSIVN 200
           +A   +K   LV   G+  N A +  +    SL              I SD+LNH SI++
Sbjct: 156 LAQLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID 215

Query: 201 GAR----GSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGEL 256
           G R         + V++H    HL  +L          ++   K+ +V+ + ++SM+G+ 
Sbjct: 216 GVRLAERQGNVEVFVYRHCDMYHLNSLL----------SNCKMKRKVVVTDSLFSMDGDF 265

Query: 257 CKLPEIIAICKKYKAYTYLDEAQ 279
             + E+  + KKY     +D+A 
Sbjct: 266 APMEELSQLRKKYGFLLVIDDAH 288


>AT5G04620.1 | Symbols: ATBIOF, BIOF | biotin F |
           chr5:1328004-1329934 FORWARD LENGTH=343
          Length = 343

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 28/155 (18%)

Query: 143 GTTDLHNELEECVASFVRKPAALVFGMGYVTNSAILPVLMGKGSL--------------I 188
           G T  H  LE  +A   +K   LV   G+  N A +  +    SL              I
Sbjct: 11  GYTTYHRLLESSLAQLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAI 70

Query: 189 ISDSLNHNSIVNGAR----GSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHRPWKKIMV 244
            SD+LNH SI++G R         + V++H    HL  +L          ++   K+ +V
Sbjct: 71  FSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLL----------SNCKMKRKVV 120

Query: 245 IVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAQ 279
           + + ++SM+G+   + E+  + KKY     +D+A 
Sbjct: 121 VTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAH 155