Miyakogusa Predicted Gene
- Lj0g3v0091159.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0091159.1 tr|Q8W235|Q8W235_SOLTU PNCBP OS=Solanum tuberosum
PE=2 SV=1,58.11,3e-18,CaM_binding,Calmodulin-binding domain, plant;
Plant calmodulin-binding domain,Calmodulin-binding dom,CUFF.4987.1
(778 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G38800.1 | Symbols: | Plant calmodulin-binding protein-relat... 129 6e-30
AT3G54570.1 | Symbols: | Plant calmodulin-binding protein-relat... 96 7e-20
AT5G04020.1 | Symbols: | calmodulin binding | chr5:1081980-1086... 96 1e-19
>AT2G38800.1 | Symbols: | Plant calmodulin-binding protein-related
| chr2:16216999-16218837 FORWARD LENGTH=612
Length = 612
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 100/181 (55%), Gaps = 41/181 (22%)
Query: 113 GSPNYMKPTSSSHAKKE----LFLVSHRKTQTGSDFKNLKRKLCSDSKDTCVSSKKTAKT 168
GSPNYMK TSSS A+KE L ++K QTGS DS+ + K+
Sbjct: 74 GSPNYMKGTSSSEARKENKKKFNLSRNQKNQTGSKH---------DSRYGVNKERSCNKS 124
Query: 169 LTRSSSLKLVRTLTKTTSFKAYRSCPRKSTRXXXXXXXXXXXXHRATCSSTLKDSKFPAY 228
+R+ R LTK FK C RATCSSTLKDSKFP Y
Sbjct: 125 SSRNG-----RGLTKAPIFK---RC-----------------SQRATCSSTLKDSKFPEY 159
Query: 229 LMLSPGGT--ESEGTSAMKVCPYTYCSLNGH-HLADLPPLKSFMSARRHVLKTQKRMKLE 285
LML+ G T + GTS +KVCPYTYCSLNGH H A PPLKSF+S RR LK+QK +K+E
Sbjct: 160 LMLNHGETFDQVNGTSVLKVCPYTYCSLNGHLHAAQYPPLKSFISLRRQSLKSQKSVKME 219
Query: 286 A 286
A
Sbjct: 220 A 220
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 94/142 (66%), Gaps = 6/142 (4%)
Query: 637 IIVVQDQNKANKFKRKTCINAEDQNTSDNGRALIRRKKHIXXXXXEMRKFNPRDPNFLPL 696
+I++ ++N F R ++++ S +I+ KK + ++R+FNPR+PN+LP
Sbjct: 477 VILMTEENAKVPFNRTRKPCKQEESGSTISWTIIKCKKPVAETE-DLREFNPREPNYLPA 535
Query: 697 VPEPGAEKVDLRHQMMDERKNAEEWMLDCALRQVVDKLAPARKKKVALLVEAFEAVMPNP 756
V + AEKVDL+HQ +DER+N+E+WM D AL++ V KLAPARK+KVALLVEAFE V P+
Sbjct: 536 VMDEDAEKVDLKHQDIDERRNSEDWMFDYALQRAVSKLAPARKRKVALLVEAFETVQPHG 595
Query: 757 KCDTRLRNSSGFAHGGRIQACS 778
+ ++ ++G +QAC+
Sbjct: 596 REPEQV-----LSYGRHLQACN 612
>AT3G54570.1 | Symbols: | Plant calmodulin-binding protein-related
| chr3:20197949-20199202 REVERSE LENGTH=417
Length = 417
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 51/71 (71%)
Query: 684 RKFNPRDPNFLPLVPEPGAEKVDLRHQMMDERKNAEEWMLDCALRQVVDKLAPARKKKVA 743
R+ NPR+PN++ EP E VDLRHQ MDERK AEEWM+D AL+ V KL RKK VA
Sbjct: 346 RRLNPREPNYIQTTVEPSNETVDLRHQDMDERKKAEEWMIDYALQHTVSKLVVERKKDVA 405
Query: 744 LLVEAFEAVMP 754
LLVEAFE +P
Sbjct: 406 LLVEAFETTVP 416
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 92/185 (49%), Gaps = 45/185 (24%)
Query: 97 TSPQKLQPLVRTTDASGSPNYMKPTSSSHAKKELFLVS---HRKTQTGSDFKNLKRKLCS 153
T+P+K Q + + T GSPNYMK T SS A+++ V +K+QTG +KL
Sbjct: 37 TTPEK-QIVAKVT--GGSPNYMKGTRSSEARRQSQSVQAGLDKKSQTG-------KKL-- 84
Query: 154 DSKDTCVSSKKTAKTLTRSSSLKLVRTLTKTTSFKAYRSCPRKSTRXXXXXXXXXXXXHR 213
D+C KK +SSS R+L K SFK R HR
Sbjct: 85 ---DSCSREKK------QSSS----RSLKKGQSFK----------RSGRIGRCWDANVHR 121
Query: 214 ATCSSTLKDSKFPAYLMLSPGGTESEGTSAMKVCPYTYCSLNGHHLADLPPLKSFMSARR 273
ATCSS LK+SKF LM + +KVCPYTYCSLN H + PPL SF+S RR
Sbjct: 122 ATCSSLLKNSKFTEDLMFT-------SPHILKVCPYTYCSLNAHLHSQFPPLLSFISERR 174
Query: 274 HVLKT 278
LK+
Sbjct: 175 RSLKS 179
>AT5G04020.1 | Symbols: | calmodulin binding | chr5:1081980-1086546
REVERSE LENGTH=1495
Length = 1495
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 667 RALIRRKKHIXXXXXEMRKFNPRDPNFLPLVPEPGAEKVDLRHQMMDERKNAEEWMLDCA 726
RA++ R+ +RKFNPR+P FLP PE AEKV+LRHQ +KN +EWM+D A
Sbjct: 1407 RAILLRR--FVKALENVRKFNPREPRFLPPNPEVEAEKVNLRHQETQNKKNGDEWMVDNA 1464
Query: 727 LRQVVDKLAPARKKKVALLVEAFEAV 752
L+ VV KL PARK KV LLV+AFE++
Sbjct: 1465 LQGVVSKLTPARKLKVQLLVQAFESL 1490
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 683 MRKFNPRDPNFLPLVPEPGAEKVDLRHQMMDERKNAEEWMLDCALRQVVDKLAPARKKKV 742
+ + +P+ P LP P+P EK+ LRHQ + ++N+EEWMLD ALRQ + LAP++K+KV
Sbjct: 1167 LTRLSPKTPRVLPWEPDPETEKIRLRHQEIGGKRNSEEWMLDYALRQAISTLAPSQKRKV 1226
Query: 743 ALLVEAFEAV 752
+LL +AF+ +
Sbjct: 1227 SLLAQAFDTI 1236
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 41/48 (85%)
Query: 707 LRHQMMDERKNAEEWMLDCALRQVVDKLAPARKKKVALLVEAFEAVMP 754
LR +++ ERKNAEEWMLD ALRQV+ LAP++KKKV LV+AFE+++P
Sbjct: 552 LRRELVGERKNAEEWMLDHALRQVISTLAPSQKKKVKHLVKAFESLIP 599
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 687 NPRDPNFLPLVPEPGAEKVDLRHQMMDE--RKNAEEWMLDCALRQVVDKLAPARKKKVAL 744
NPR LP+ AE V LRH+ + E R EE MLD ALRQ + +LAP ++KKV L
Sbjct: 877 NPRKMRNLPVESAFEAENVFLRHRSIMEGTRTEGEEMMLDYALRQAISRLAPIQRKKVDL 936
Query: 745 LVEAFEAVMPNPKCDTRLRNS 765
LV+AF+ V+ + +NS
Sbjct: 937 LVQAFDIVLDGHDTPKQTKNS 957