Miyakogusa Predicted Gene

Lj0g3v0090569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0090569.1 Non Chatacterized Hit- tr|I1G9L1|I1G9L1_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica
GN,43.1,6e-18,THIOREDOXIN_2,Thioredoxin-like fold; SUBFAMILY NOT
NAMED,NULL; THIOREDOXIN,NULL; Thioredoxin-like,Th,CUFF.4907.1
         (566 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G60420.1 | Symbols:  | DC1 domain-containing protein | chr1:2...   724   0.0  
AT4G31240.2 | Symbols:  | protein kinase C-like zinc finger prot...   273   3e-73
AT4G31240.1 | Symbols:  | protein kinase C-like zinc finger prot...   273   3e-73

>AT1G60420.1 | Symbols:  | DC1 domain-containing protein |
           chr1:22261978-22264243 FORWARD LENGTH=578
          Length = 578

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/569 (60%), Positives = 433/569 (76%), Gaps = 4/569 (0%)

Query: 2   ADVTHDVLSLLSSPDKDFLLRNNGDQVKIDSLKGKKLGLYFSASWCGPCRSFTPTLVEVY 61
            D   D+ SLLSSP +DFL+RN+G+QVK+DSL GKK+GLYFSA+WCGPC+ FTP LVEVY
Sbjct: 10  GDDAQDLHSLLSSPARDFLVRNDGEQVKVDSLLGKKIGLYFSAAWCGPCQRFTPQLVEVY 69

Query: 62  NEVSQKGDFEVIFVTADEDDESFKSYFSKMPWLAIPFSDSEMRNHLDELFHVRGIPHLAL 121
           NE+S K  FE++FV+ DED+ESF  YF KMPWLA+PF+DSE R+ LDELF VRGIP+L +
Sbjct: 70  NELSSKVGFEIVFVSGDEDEESFGDYFRKMPWLAVPFTDSETRDRLDELFKVRGIPNLVM 129

Query: 122 LDESGKVITEDGVETIREYGVDGYPFTLARIQELKDQEEEAKRNQTLRSILVSHSRDFVI 181
           +D+ GK++ E+GV  IR YG D YPFT  +++E+K+ E+ A+R QTLRS+LV+ SRDFVI
Sbjct: 130 VDDHGKLVNENGVGVIRSYGADAYPFTPEKMKEIKEDEDRARRGQTLRSVLVTPSRDFVI 189

Query: 182 SADGKKLLVSELEGKTVGLYFCSASYRSCSDFTLQLVEVYEKLKAKGENFEVVLIPLDDD 241
           S DG K+ VSELEGKT+GL F  ASYR C++ T +LVE Y KLK   E+FE+VLI L+DD
Sbjct: 190 SPDGNKVPVSELEGKTIGLLFSVASYRKCTELTPKLVEFYTKLKENKEDFEIVLISLEDD 249

Query: 242 EESFKEELESIPWLSLPFKDKSNEKLIRYFELSTLPTLVIIGPDGKTLNPNVVEAIEEHG 301
           EESF ++ ++ PWL+LPF DKS  KL R+F LSTLPTLVI+GPDGKT + NV EAI+++G
Sbjct: 250 EESFNQDFKTKPWLALPFNDKSGSKLARHFMLSTLPTLVILGPDGKTRHSNVAEAIDDYG 309

Query: 302 IAAFPFTPXXXXXXXXXXXXXXXXQTLESILVSGDQDYVLGKDGVKVPVSELKGKNILLY 361
           + A+PFTP                QTLES+LVSGD +YVLGKDG KV VS+L GK IL+Y
Sbjct: 310 VLAYPFTPEKFQELKELEKAKVEAQTLESLLVSGDLNYVLGKDGAKVLVSDLVGKTILMY 369

Query: 362 FSAHWCPPCRAFLPKLIDAYHKIKAKDNPFEVVFISSDRDQASFDEFFAGMPWLALPFGD 421
           FSAHWCPPCRAF PKL++ Y +IK ++  FE++FISSDRDQ SFDE+++ MPWLALPFGD
Sbjct: 370 FSAHWCPPCRAFTPKLVEVYKQIKERNEAFELIFISSDRDQESFDEYYSQMPWLALPFGD 429

Query: 422 SRKALLSRKFKVSGIPMLVAIGSSGRTVTKEARDLVALYGADAYPFTXXXXXXXXXXXXX 481
            RKA L++ FKV GIPML A+G +G+TVTKEARDLV  +GADAYPFT             
Sbjct: 430 PRKASLAKTFKVGGIPMLAALGPTGQTVTKEARDLVVAHGADAYPFTEERLKEIEAKYDE 489

Query: 482 TVKGWPEKVIHETH-EHELMLTRRRIYYCDECGDEGHIWSYYCEECDFDLHPKCA-SVDK 539
             K WP+KV H  H EHEL LTR ++Y CD+C +EG IWSY+C+ECDFDLH KCA + D 
Sbjct: 490 IAKDWPKKVKHVLHEEHELELTRVQVYTCDKCEEEGTIWSYHCDECDFDLHAKCALNEDT 549

Query: 540 GSKGDDTKE--EEISKDGWVCDGEVCSKA 566
              GD+  +   + SKDGWVC+G VC+KA
Sbjct: 550 KENGDEAVKVGGDESKDGWVCEGNVCTKA 578


>AT4G31240.2 | Symbols:  | protein kinase C-like zinc finger protein
           | chr4:15176637-15177986 REVERSE LENGTH=392
          Length = 392

 Score =  273 bits (697), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 140/369 (37%), Positives = 205/369 (55%), Gaps = 2/369 (0%)

Query: 168 LRSILVSHSRDFVISADGKKLLVSELEGKTVGLYFCSASYRSCSDFTLQLVEVYEKLKAK 227
           L SIL +   +F++S  G+ + +  + GKT+ L+F +   R C DFT +L+++YE L+ +
Sbjct: 17  LYSILAAEGIEFLLSHSGE-VPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQNR 75

Query: 228 GENFEVVLIPLDDDEESFKEELESIPWLSLPFKDKSNEKLIRYFELSTLPTLVIIGPDGK 287
           GE  E++ +  D D  SF E    +PWL++PF      KL   + +S +P+LV +  D  
Sbjct: 76  GEELEIIFVSFDHDMTSFYEHFWCMPWLAVPFNLSLLNKLRDKYGISRIPSLVPLYSDEI 135

Query: 288 TLNPNVVEAIEEHGIAAFPFTPXXXXXXXXXXXXXXXXQTLESILVSGDQDYVLGKDGVK 347
           ++  +V+  IE++G  AFPFT                   LE +L    ++YV+ ++G K
Sbjct: 136 SVAEDVIGLIEDYGSEAFPFTKKRKEELKAIDDSKRLGGQLEKLLTHESRNYVVARNGSK 195

Query: 348 VPVSELKGKNILLYFSAHWCPPCRAFLPKLIDAYHKIKAKDN-PFEVVFISSDRDQASFD 406
           V VS+L GK I LYF AHWCPP R+F  +L+D Y+++   D   FEV+ IS+DRD   F+
Sbjct: 196 VLVSKLVGKTIGLYFGAHWCPPFRSFTSQLVDVYNELATTDKGSFEVILISTDRDSREFN 255

Query: 407 EFFAGMPWLALPFGDSRKALLSRKFKVSGIPMLVAIGSSGRTVTKEARDLVALYGADAYP 466
                MPWLA+P+ D  +  L R F V  IP LV IG   +TVT  AR++V+LYG+ ++P
Sbjct: 256 INMTNMPWLAIPYEDRTRQDLCRIFNVKLIPALVIIGPEEKTVTTNAREMVSLYGSRSFP 315

Query: 467 FTXXXXXXXXXXXXXTVKGWPEKVIHETHEHELMLTRRRIYYCDECGDEGHIWSYYCEEC 526
           FT                  P KV    HEHEL L   + Y CD C  +G  W++ C  C
Sbjct: 316 FTESRIVELKACLKKEGDSLPRKVKDNKHEHELKLDMAKAYVCDFCKKQGRFWAFSCNAC 375

Query: 527 DFDLHPKCA 535
           D+DLHP C 
Sbjct: 376 DYDLHPTCV 384



 Score =  225 bits (573), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 117/304 (38%), Positives = 187/304 (61%), Gaps = 4/304 (1%)

Query: 7   DVLSLLSSPDKDFLLRNNGDQVKIDSLKGKKLGLYFSASWCGPCRSFTPTLVEVYNEVSQ 66
           D+ S+L++   +FLL ++G +V ++ + GK + L+FSA WC PC+ FTP L+++Y  +  
Sbjct: 16  DLYSILAAEGIEFLLSHSG-EVPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQN 74

Query: 67  KGD-FEVIFVTADEDDESFKSYFSKMPWLAIPFSDSEMRNHLDELFHVRGIPHLALLDES 125
           +G+  E+IFV+ D D  SF  +F  MPWLA+PF+ S + N L + + +  IP L  L   
Sbjct: 75  RGEELEIIFVSFDHDMTSFYEHFWCMPWLAVPFNLS-LLNKLRDKYGISRIPSLVPLYSD 133

Query: 126 GKVITEDGVETIREYGVDGYPFTLARIQELKDQEEEAKRNQTLRSILVSHSRDFVISADG 185
              + ED +  I +YG + +PFT  R +ELK  ++  +    L  +L   SR++V++ +G
Sbjct: 134 EISVAEDVIGLIEDYGSEAFPFTKKRKEELKAIDDSKRLGGQLEKLLTHESRNYVVARNG 193

Query: 186 KKLLVSELEGKTVGLYFCSASYRSCSDFTLQLVEVYEKLKAKGE-NFEVVLIPLDDDEES 244
            K+LVS+L GKT+GLYF +        FT QLV+VY +L    + +FEV+LI  D D   
Sbjct: 194 SKVLVSKLVGKTIGLYFGAHWCPPFRSFTSQLVDVYNELATTDKGSFEVILISTDRDSRE 253

Query: 245 FKEELESIPWLSLPFKDKSNEKLIRYFELSTLPTLVIIGPDGKTLNPNVVEAIEEHGIAA 304
           F   + ++PWL++P++D++ + L R F +  +P LVIIGP+ KT+  N  E +  +G  +
Sbjct: 254 FNINMTNMPWLAIPYEDRTRQDLCRIFNVKLIPALVIIGPEEKTVTTNAREMVSLYGSRS 313

Query: 305 FPFT 308
           FPFT
Sbjct: 314 FPFT 317



 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 3/148 (2%)

Query: 11  LLSSPDKDFLLRNNGDQVKIDSLKGKKLGLYFSASWCGPCRSFTPTLVEVYNEVSQ--KG 68
           LL+   +++++  NG +V +  L GK +GLYF A WC P RSFT  LV+VYNE++   KG
Sbjct: 179 LLTHESRNYVVARNGSKVLVSKLVGKTIGLYFGAHWCPPFRSFTSQLVDVYNELATTDKG 238

Query: 69  DFEVIFVTADEDDESFKSYFSKMPWLAIPFSDSEMRNHLDELFHVRGIPHLALLDESGKV 128
            FEVI ++ D D   F    + MPWLAIP+ D   R  L  +F+V+ IP L ++    K 
Sbjct: 239 SFEVILISTDRDSREFNINMTNMPWLAIPYED-RTRQDLCRIFNVKLIPALVIIGPEEKT 297

Query: 129 ITEDGVETIREYGVDGYPFTLARIQELK 156
           +T +  E +  YG   +PFT +RI ELK
Sbjct: 298 VTTNAREMVSLYGSRSFPFTESRIVELK 325


>AT4G31240.1 | Symbols:  | protein kinase C-like zinc finger protein
           | chr4:15176637-15177986 REVERSE LENGTH=392
          Length = 392

 Score =  273 bits (697), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 140/369 (37%), Positives = 205/369 (55%), Gaps = 2/369 (0%)

Query: 168 LRSILVSHSRDFVISADGKKLLVSELEGKTVGLYFCSASYRSCSDFTLQLVEVYEKLKAK 227
           L SIL +   +F++S  G+ + +  + GKT+ L+F +   R C DFT +L+++YE L+ +
Sbjct: 17  LYSILAAEGIEFLLSHSGE-VPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQNR 75

Query: 228 GENFEVVLIPLDDDEESFKEELESIPWLSLPFKDKSNEKLIRYFELSTLPTLVIIGPDGK 287
           GE  E++ +  D D  SF E    +PWL++PF      KL   + +S +P+LV +  D  
Sbjct: 76  GEELEIIFVSFDHDMTSFYEHFWCMPWLAVPFNLSLLNKLRDKYGISRIPSLVPLYSDEI 135

Query: 288 TLNPNVVEAIEEHGIAAFPFTPXXXXXXXXXXXXXXXXQTLESILVSGDQDYVLGKDGVK 347
           ++  +V+  IE++G  AFPFT                   LE +L    ++YV+ ++G K
Sbjct: 136 SVAEDVIGLIEDYGSEAFPFTKKRKEELKAIDDSKRLGGQLEKLLTHESRNYVVARNGSK 195

Query: 348 VPVSELKGKNILLYFSAHWCPPCRAFLPKLIDAYHKIKAKDN-PFEVVFISSDRDQASFD 406
           V VS+L GK I LYF AHWCPP R+F  +L+D Y+++   D   FEV+ IS+DRD   F+
Sbjct: 196 VLVSKLVGKTIGLYFGAHWCPPFRSFTSQLVDVYNELATTDKGSFEVILISTDRDSREFN 255

Query: 407 EFFAGMPWLALPFGDSRKALLSRKFKVSGIPMLVAIGSSGRTVTKEARDLVALYGADAYP 466
                MPWLA+P+ D  +  L R F V  IP LV IG   +TVT  AR++V+LYG+ ++P
Sbjct: 256 INMTNMPWLAIPYEDRTRQDLCRIFNVKLIPALVIIGPEEKTVTTNAREMVSLYGSRSFP 315

Query: 467 FTXXXXXXXXXXXXXTVKGWPEKVIHETHEHELMLTRRRIYYCDECGDEGHIWSYYCEEC 526
           FT                  P KV    HEHEL L   + Y CD C  +G  W++ C  C
Sbjct: 316 FTESRIVELKACLKKEGDSLPRKVKDNKHEHELKLDMAKAYVCDFCKKQGRFWAFSCNAC 375

Query: 527 DFDLHPKCA 535
           D+DLHP C 
Sbjct: 376 DYDLHPTCV 384



 Score =  225 bits (573), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 117/304 (38%), Positives = 187/304 (61%), Gaps = 4/304 (1%)

Query: 7   DVLSLLSSPDKDFLLRNNGDQVKIDSLKGKKLGLYFSASWCGPCRSFTPTLVEVYNEVSQ 66
           D+ S+L++   +FLL ++G +V ++ + GK + L+FSA WC PC+ FTP L+++Y  +  
Sbjct: 16  DLYSILAAEGIEFLLSHSG-EVPLEYIHGKTICLFFSAIWCRPCKDFTPELIKLYENLQN 74

Query: 67  KGD-FEVIFVTADEDDESFKSYFSKMPWLAIPFSDSEMRNHLDELFHVRGIPHLALLDES 125
           +G+  E+IFV+ D D  SF  +F  MPWLA+PF+ S + N L + + +  IP L  L   
Sbjct: 75  RGEELEIIFVSFDHDMTSFYEHFWCMPWLAVPFNLS-LLNKLRDKYGISRIPSLVPLYSD 133

Query: 126 GKVITEDGVETIREYGVDGYPFTLARIQELKDQEEEAKRNQTLRSILVSHSRDFVISADG 185
              + ED +  I +YG + +PFT  R +ELK  ++  +    L  +L   SR++V++ +G
Sbjct: 134 EISVAEDVIGLIEDYGSEAFPFTKKRKEELKAIDDSKRLGGQLEKLLTHESRNYVVARNG 193

Query: 186 KKLLVSELEGKTVGLYFCSASYRSCSDFTLQLVEVYEKLKAKGE-NFEVVLIPLDDDEES 244
            K+LVS+L GKT+GLYF +        FT QLV+VY +L    + +FEV+LI  D D   
Sbjct: 194 SKVLVSKLVGKTIGLYFGAHWCPPFRSFTSQLVDVYNELATTDKGSFEVILISTDRDSRE 253

Query: 245 FKEELESIPWLSLPFKDKSNEKLIRYFELSTLPTLVIIGPDGKTLNPNVVEAIEEHGIAA 304
           F   + ++PWL++P++D++ + L R F +  +P LVIIGP+ KT+  N  E +  +G  +
Sbjct: 254 FNINMTNMPWLAIPYEDRTRQDLCRIFNVKLIPALVIIGPEEKTVTTNAREMVSLYGSRS 313

Query: 305 FPFT 308
           FPFT
Sbjct: 314 FPFT 317



 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 3/148 (2%)

Query: 11  LLSSPDKDFLLRNNGDQVKIDSLKGKKLGLYFSASWCGPCRSFTPTLVEVYNEVSQ--KG 68
           LL+   +++++  NG +V +  L GK +GLYF A WC P RSFT  LV+VYNE++   KG
Sbjct: 179 LLTHESRNYVVARNGSKVLVSKLVGKTIGLYFGAHWCPPFRSFTSQLVDVYNELATTDKG 238

Query: 69  DFEVIFVTADEDDESFKSYFSKMPWLAIPFSDSEMRNHLDELFHVRGIPHLALLDESGKV 128
            FEVI ++ D D   F    + MPWLAIP+ D   R  L  +F+V+ IP L ++    K 
Sbjct: 239 SFEVILISTDRDSREFNINMTNMPWLAIPYED-RTRQDLCRIFNVKLIPALVIIGPEEKT 297

Query: 129 ITEDGVETIREYGVDGYPFTLARIQELK 156
           +T +  E +  YG   +PFT +RI ELK
Sbjct: 298 VTTNAREMVSLYGSRSFPFTESRIVELK 325