Miyakogusa Predicted Gene
- Lj0g3v0089839.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0089839.1 Non Chatacterized Hit- tr|I1KVG3|I1KVG3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.86,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,Tetratricopeptide-like hel,CUFF.4844.1
(756 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 741 0.0
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 634 0.0
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 570 e-163
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 546 e-155
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 541 e-154
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 530 e-150
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 526 e-149
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 515 e-146
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 509 e-144
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 496 e-140
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 492 e-139
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 491 e-139
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 488 e-138
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 479 e-135
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 477 e-134
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 473 e-133
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 471 e-133
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 469 e-132
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 468 e-132
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 461 e-130
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 459 e-129
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 458 e-129
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-128
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 455 e-128
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 452 e-127
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 451 e-127
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 447 e-126
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 443 e-124
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 442 e-124
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-123
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 440 e-123
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 440 e-123
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 440 e-123
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 439 e-123
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 438 e-123
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 438 e-123
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 428 e-120
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 426 e-119
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 424 e-118
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 423 e-118
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-115
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-115
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 413 e-115
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 413 e-115
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 411 e-114
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 407 e-113
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 405 e-113
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 405 e-113
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 404 e-113
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 402 e-112
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 395 e-110
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 395 e-110
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 392 e-109
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 386 e-107
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 384 e-106
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 382 e-106
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 375 e-104
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 370 e-102
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 360 2e-99
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 355 6e-98
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 355 7e-98
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 3e-97
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 352 8e-97
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 350 2e-96
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 2e-95
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 344 1e-94
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 4e-94
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 339 5e-93
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 337 1e-92
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 336 3e-92
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 2e-91
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 1e-89
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 327 2e-89
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 326 3e-89
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 6e-89
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 8e-89
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 1e-88
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 324 1e-88
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 7e-88
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 9e-88
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 321 1e-87
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 2e-87
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 320 3e-87
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 6e-87
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 318 7e-87
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 1e-85
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 2e-85
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 6e-85
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 310 3e-84
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 4e-84
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 5e-84
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 308 1e-83
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 307 2e-83
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 306 4e-83
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 4e-82
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 7e-82
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 6e-80
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 4e-79
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 6e-79
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 9e-79
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 9e-79
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 3e-76
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 1e-75
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 279 5e-75
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 2e-74
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 3e-74
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 1e-73
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 1e-73
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 272 7e-73
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 7e-73
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 7e-70
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 6e-69
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 5e-68
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 6e-68
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 2e-67
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 6e-66
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 246 4e-65
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 7e-64
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 1e-62
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 3e-62
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 6e-62
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 3e-58
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 6e-58
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 5e-52
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 6e-50
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 4e-46
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 4e-44
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 4e-31
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 9e-31
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 9e-30
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 2e-28
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 123 5e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 6e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 9e-28
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 120 4e-27
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 8e-27
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 2e-26
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 4e-24
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 8e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 4e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 7e-23
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 8e-23
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 105 1e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 1e-22
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 105 1e-22
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 104 2e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 102 1e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 2e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 100 3e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 6e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 9e-21
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 94 4e-19
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 7e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 92 1e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 91 3e-18
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 5e-18
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 89 2e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 6e-17
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 86 8e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 84 5e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 7e-16
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 8e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 83 9e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 82 1e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 82 1e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 8e-15
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 8e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 79 8e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 70 8e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 3e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 66 8e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 64 6e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 63 6e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 7e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 7e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 2e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 53 9e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 1e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 52 1e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 50 8e-06
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/625 (56%), Positives = 455/625 (72%), Gaps = 1/625 (0%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
IS+L CK+T Q KQ+HS++I G++ +P F K+ F C++ G V YA ++F IP P
Sbjct: 38 ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDM-ALKYGKVL 173
V +WN MIKG+S++ C G+ +YL ML + PDS TFPFLL G D AL GK L
Sbjct: 98 DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKL 157
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXX 233
H VK GL SNL+VQ A + ++SLCGL+D+A +F+ +V +WN+M+SGYNR+
Sbjct: 158 HCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEY 217
Query: 234 XXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVL 293
VSP SVTL+L+LSACSK+ D V++Y++E EP+L +EN L
Sbjct: 218 EESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENAL 277
Query: 294 LDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWT 353
++ + ACGEMD A +F +MK RDVISWTSIV G+ G + LAR YFDQMP RD +SWT
Sbjct: 278 VNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 354 AMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 413
MIDGYLR F E+L +FREMQ + + PDEFTMVS+LTACAHLG+LE+GEW+KTYIDKN
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 397
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMF 473
KI ND +G+ALIDMYFKCG EKA+K F +M Q+DKF WTAM+VGLA NG G+EA+ +F
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVF 457
Query: 474 SNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSR 533
M + SI PDDITY+GVLSAC H+GMV++ RKFFA M H I+P++ HYGCMVD+L R
Sbjct: 458 FQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGR 517
Query: 534 AGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLL 593
AG +KEA +++ MP+ PNSIVWG+LLGA R+H + +AE+AAK+I+ELEP+NG+VY LL
Sbjct: 518 AGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL 577
Query: 594 CNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKL 653
CNIYA CKRW++LREVR +++ IKKTPG SL+E+NG +EFVAGD+SH QS+EIY KL
Sbjct: 578 CNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637
Query: 654 ENMMQDLTNAGYSPDTSEVFLDIGE 678
E + Q+ T A Y PDTSE+ + G+
Sbjct: 638 EELAQESTFAAYLPDTSELLFEAGD 662
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 634 bits (1634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/705 (42%), Positives = 457/705 (64%), Gaps = 3/705 (0%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
ISL+ERC S QLKQ H I+ G SDP +K+ A ++YAR+VFD IP P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHN-IKPDSFTFPFLLKGFTNDMALKYGKVL 173
+ F WNT+I+ Y+ P I +L M++ + P+ +TFPFL+K +L G+ L
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXX 233
AVK + S++FV + IH + CG +D A K+F +VV+WN M++G+ +
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 234 XXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVL 293
V + VT+V +LSAC+K+ +L G V Y+ E V NL + N +
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 294 LDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWT 353
LDM+ CG ++ AK +FD M+ +D ++WT+++ G+A + + AR+ + MP++D V+W
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 354 AMIDGYLRMNHFREALALFREMQMS-HVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 412
A+I Y + EAL +F E+Q+ ++K ++ T+VS L+ACA +GALELG W+ +YI K
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 413 NKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTM 472
+ I + + SALI MY KCG++EK+R+ F + ++D F+W+AMI GLA++G G EA+ M
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 473 FSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLS 532
F M E+++ P+ +T+ V AC+H G+V++ F M +GI P HY C+VD+L
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLG 513
Query: 533 RAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVL 592
R+G+L++A+ I MP+ P++ VWG+LLGAC++H N+ LAEMA +++ELEP N +VL
Sbjct: 514 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVL 573
Query: 593 LCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAK 652
L NIYA +WEN+ E+R M G+KK PGCS +E++G+I+EF++GD +HP S+++Y K
Sbjct: 574 LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGK 633
Query: 653 LENMMQDLTNAGYSPDTSEVFLDIGEED-KETALFRHSEKLAIAYALISSGPGVTIRIVK 711
L +M+ L + GY P+ S+V I EE+ KE +L HSEKLAI Y LIS+ IR++K
Sbjct: 634 LHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIK 693
Query: 712 NLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
NLR+C DCH +AKL+S+ Y+RE++VRD+ RFHHFR+G CSCN+FW
Sbjct: 694 NLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 570 bits (1470), Expect = e-163, Method: Compositional matrix adjust.
Identities = 289/736 (39%), Positives = 438/736 (59%), Gaps = 65/736 (8%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGD-VDYARQVFDTIPH 113
+SLL CK+ L+ IH++ IK+GL + +K+I FC + + YA VF TI
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
P++ IWNTM +G++ S P S + +Y+ M++ + P+S+TFPF+LK A K G+ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGD-------------------- 213
H +KLG D +L+V + I ++ G ++ AHK+F+
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 214 -----------AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSAC 262
+VV+WN M+SGY V P+ T+V ++SAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 263 SKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWT 322
++ + G V+ ++ + NL + N L+D++ CGE++ A G+F+
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE----------- 325
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKP 382
++P +D +SW +I GY MN ++EAL LF+EM S P
Sbjct: 326 --------------------RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDK--NKINNDTFIGSALIDMYFKCGNVEKARK 440
++ TM+SIL ACAHLGA+++G W+ YIDK + N + + ++LIDMY KCG++E A +
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425
Query: 441 TFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGM 500
F + K W AMI G A++G + + +FS M + I PDDIT++G+LSAC+H+GM
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485
Query: 501 VEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
++ GR F +MT + + P + HYGCM+DLL +G KEA ++I M ++P+ ++W SLL
Sbjct: 486 LDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLL 545
Query: 561 GACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKK 620
AC++H NVEL E A+ +I++EPEN YVLL NIYA+ RW + + R ++ ++G+KK
Sbjct: 546 KACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK 605
Query: 621 TPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEED 680
PGCS +E++ +++EF+ GD+ HP+++EIY LE M L AG+ PDTSEV ++ EE
Sbjct: 606 VPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEW 665
Query: 681 KETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKT 740
KE AL HSEKLAIA+ LIS+ PG + IVKNLR+C +CH+ KL+SK Y RE++ RD+T
Sbjct: 666 KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRT 725
Query: 741 RFHHFRHGVCSCNNFW 756
RFHHFR GVCSCN++W
Sbjct: 726 RFHHFRDGVCSCNDYW 741
Score = 210 bits (534), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 248/512 (48%), Gaps = 19/512 (3%)
Query: 122 MIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLG 181
M+ S ++ P S + L + + DS L N L+ +++ +K+G
Sbjct: 1 MMLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG 60
Query: 182 LDSNLFVQKAFIHLFSLCGL------VDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXX 235
L + + A L C L + A +F ++ WN M G+
Sbjct: 61 LHNTNY---ALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVS 117
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLD 295
G+ PNS T +L +C+K G ++ ++ + + +L + L+
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 177
Query: 296 MFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAM 355
M+ G ++ A VFD RDV+S+T+++ G+A+ G I+ A+K FD++P +D VSW AM
Sbjct: 178 MYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAM 237
Query: 356 IDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
I GY +++EAL LF++M ++V+PDE TMV++++ACA G++ELG V +ID +
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSN 475
++ I +ALID+Y KCG +E A F+ + KD W +I G +EAL +F
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 357
Query: 476 MIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ-HGIKPNVTHYGCMVDLLSRA 534
M+ S TP+D+T + +L AC H G ++ GR + + G+ + ++D+ ++
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 535 GHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA--EMAAKQIIELEPENGSVYVL 592
G + EA + N + + W +++ +H + + + + I ++P++ +
Sbjct: 418 GDI-EAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD----IT 472
Query: 593 LCNIYAACKRWENLREVRTIM--MERGIKKTP 622
+ +AC L R I M + K TP
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 504
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 546 bits (1406), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/690 (39%), Positives = 412/690 (59%), Gaps = 4/690 (0%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
QIH +KMG + D N ++ F E G++D AR+VFD + +V W +MI GY+R
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHF--YAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 129 ISCPKSGISMYLLMLA-HNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
K + ++ M+ + P+S T ++ L+ G+ + G++ N
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+ A + ++ C +D+A ++F+ A + N M S Y R G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
V P+ ++++ +S+CS+L ++ G + Y+ E + N L+DM+ C D A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
+FD M + V++W SIV+G+ G++D A + F+ MPE++ VSW +I G ++ + F E
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 368 ALALFREMQMSH-VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
A+ +F MQ V D TM+SI +AC HLGAL+L +W+ YI+KN I D +G+ L+
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
DM+ +CG+ E A F + +D WTA I +A+ G+ E A+ +F +MIE + PD +
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
++G L+AC+H G+V++G++ F SM HG+ P HYGCMVDLL RAG L+EA+ +I +
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 547 MPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENL 606
MP++PN ++W SLL ACRV NVE+A AA++I L PE YVLL N+YA+ RW ++
Sbjct: 633 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 692
Query: 607 REVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYS 666
+VR M E+G++K PG S +++ G +EF +GD+SHP+ I A L+ + Q ++ G+
Sbjct: 693 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHV 752
Query: 667 PDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLV 726
PD S V +D+ E++K L RHSEKLA+AY LISS G TIRIVKNLR+C DCH AK
Sbjct: 753 PDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFA 812
Query: 727 SKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
SK YNRE+++RD RFH+ R G CSC +FW
Sbjct: 813 SKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 243/501 (48%), Gaps = 49/501 (9%)
Query: 49 CFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCC---TQESGDVDYAR 105
C TP SL + CK+ +LK H K GL +D K++A C T+ES + +A+
Sbjct: 31 CTKATPSSL-KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRES--LSFAK 87
Query: 106 QVFD-TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTND 164
+VF+ + + + F++N++I+GY+ I ++L M+ I PD +TFPF L
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 165 MALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVML 224
A G + VK+G +LFVQ + +H ++ CG +D A K+F+ VV+W M+
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 225 SGY-NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIV 283
GY R V+PNSVT+V ++SAC+KL DL G VY ++ +
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQ 343
E N +M + L+DM+ C +D AK +FD G +N +DL
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEY-------------GASN---LDLC------ 305
Query: 344 MPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG 403
AM Y+R REAL +F M S V+PD +M+S +++C+ L + G
Sbjct: 306 ---------NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 404 EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAIN 463
+ Y+ +N + I +ALIDMY KC + A + F M K W +++ G N
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 464 GHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN-VT 522
G + A F M E +I +++ ++S + E+ + F SM Q G+ + VT
Sbjct: 417 GEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 523 HYGCMVDLLSRAGHLKEALDV 543
M+ + S GHL ALD+
Sbjct: 473 ----MMSIASACGHLG-ALDL 488
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 541 bits (1393), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/689 (39%), Positives = 411/689 (59%), Gaps = 4/689 (0%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
QIH +KMG + D N ++ F E G++D AR+VFD + +V W +MI GY+R
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHF--YAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 129 ISCPKSGISMYLLMLA-HNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
K + ++ M+ + P+S T ++ L+ G+ + G++ N
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+ A + ++ C +D+A ++F+ A + N M S Y R G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
V P+ ++++ +S+CS+L ++ G + Y+ E + N L+DM+ C D A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
+FD M + V++W SIV+G+ G++D A + F+ MPE++ VSW +I G ++ + F E
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 368 ALALFREMQMSH-VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
A+ +F MQ V D TM+SI +AC HLGAL+L +W+ YI+KN I D +G+ L+
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
DM+ +CG+ E A F + +D WTA I +A+ G+ E A+ +F +MIE + PD +
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
++G L+AC+H G+V++G++ F SM HG+ P HYGCMVDLL RAG L+EA+ +I +
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 547 MPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENL 606
MP++PN ++W SLL ACRV NVE+A AA++I L PE YVLL N+YA+ RW ++
Sbjct: 633 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 692
Query: 607 REVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYS 666
+VR M E+G++K PG S +++ G +EF +GD+SHP+ I A L+ + Q ++ G+
Sbjct: 693 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHV 752
Query: 667 PDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLV 726
PD S V +D+ E++K L RHSEKLA+AY LISS G TIRIVKNLR+C DCH AK
Sbjct: 753 PDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFA 812
Query: 727 SKAYNRELVVRDKTRFHHFRHGVCSCNNF 755
SK YNRE+++RD RFH+ R G CSC +F
Sbjct: 813 SKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 243/501 (48%), Gaps = 49/501 (9%)
Query: 49 CFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCC---TQESGDVDYAR 105
C TP SL + CK+ +LK H K GL +D K++A C T+ES + +A+
Sbjct: 31 CTKATPSSL-KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRES--LSFAK 87
Query: 106 QVFD-TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTND 164
+VF+ + + + F++N++I+GY+ I ++L M+ I PD +TFPF L
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 165 MALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVML 224
A G + VK+G +LFVQ + +H ++ CG +D A K+F+ VV+W M+
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 225 SGY-NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIV 283
GY R V+PNSVT+V ++SAC+KL DL G VY ++ +
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQ 343
E N +M + L+DM+ C +D AK +FD G +N +DL
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEY-------------GASN---LDLC------ 305
Query: 344 MPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG 403
AM Y+R REAL +F M S V+PD +M+S +++C+ L + G
Sbjct: 306 ---------NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 404 EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAIN 463
+ Y+ +N + I +ALIDMY KC + A + F M K W +++ G N
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 464 GHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN-VT 522
G + A F M E +I +++ ++S + E+ + F SM Q G+ + VT
Sbjct: 417 GEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 523 HYGCMVDLLSRAGHLKEALDV 543
M+ + S GHL ALD+
Sbjct: 473 ----MMSIASACGHLG-ALDL 488
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 530 bits (1366), Expect = e-150, Method: Compositional matrix adjust.
Identities = 272/716 (37%), Positives = 433/716 (60%), Gaps = 19/716 (2%)
Query: 53 TPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFC----CTQESGDVDYARQVF 108
T + L CKS +KQ+H+ ++ V +K+ +F + S ++ YA VF
Sbjct: 14 TILEKLSFCKSLNHIKQLHAHILR------TVINHKLNSFLFNLSVSSSSINLSYALNVF 67
Query: 109 DTIPHP-SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMAL 167
+IP P ++N ++ SR S P++ I Y + + D F+F +LK + AL
Sbjct: 68 SSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSAL 127
Query: 168 KYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY 227
G L A K+ + FV+ F+ +++ CG ++ A +F+ +VVTWN M+ Y
Sbjct: 128 FEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERY 187
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
R V P+ + L I+SAC + ++ +Y++L E V +
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT 247
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER 347
+ L+ M+ G MD A+ F M R++ T++VSG++ G++D A+ FDQ ++
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
D V WT MI Y+ ++ +EAL +F EM S +KPD +M S+++ACA+LG L+ +WV
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGE 467
+ I N + ++ I +ALI+MY KCG ++ R F++M +++ W++MI L+++G
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEAS 427
Query: 468 EALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCM 527
+AL++F+ M + ++ P+++T++GVL C+H+G+VE+G+K FASMT ++ I P + HYGCM
Sbjct: 428 DALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCM 487
Query: 528 VDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENG 587
VDL RA L+EAL+VI +MPV N ++WGSL+ ACR+H +EL + AAK+I+ELEP++
Sbjct: 488 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 547
Query: 588 SVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSK 647
VL+ NIYA +RWE++R +R +M E+ + K G S ++ NG +EF+ GD+ H QS
Sbjct: 548 GALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSN 607
Query: 648 EIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGP---- 703
EIYAKL+ ++ L AGY PD V +D+ EE+K+ + HSEKLA+ + L++
Sbjct: 608 EIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEK 667
Query: 704 ---GVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
GV IRIVKNLR+C DCH KLVSK Y RE++VRD+TRFH +++G+CSC ++W
Sbjct: 668 DSCGV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 245/602 (40%), Positives = 386/602 (64%), Gaps = 3/602 (0%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
+SLLE+CK LKQI ++ I GL DP +++IAFC ES +DY+ ++ I +P
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNI---KPDSFTFPFLLKGFTNDMALKYGK 171
++F WN I+G+S PK +Y ML H +PD FT+P L K + G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 172 VLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVX 231
++L H +KL L+ V A IH+F+ CG ++ A K+F+ ++V+WN +++GY ++
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 232 XXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMEN 291
GV P+ VT++ ++S+CS L DL G Y+Y+ E + + + N
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
L+DMF CG++ A+ +FDN++ R ++SWT+++SG+A G +D++RK FD M E+D V
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
W AMI G ++ ++ALALF+EMQ S+ KPDE TM+ L+AC+ LGAL++G W+ YI+
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
K ++ + +G++L+DMY KCGN+ +A F + ++ +TA+I GLA++G A++
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAIS 476
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
F+ MI++ I PD+IT+IG+LSAC H GM++ GR +F+ M + + P + HY MVDLL
Sbjct: 477 YFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLL 536
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYV 591
RAG L+EA ++ +MP++ ++ VWG+LL CR+H NVEL E AAK+++EL+P + +YV
Sbjct: 537 GRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYV 596
Query: 592 LLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYA 651
LL +Y WE+ + R +M ERG++K PGCS +E+NGI+ EF+ D+S P+S++IY
Sbjct: 597 LLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYD 656
Query: 652 KL 653
+L
Sbjct: 657 RL 658
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 265/705 (37%), Positives = 400/705 (56%), Gaps = 40/705 (5%)
Query: 56 SLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS 115
SL++ QLKQIH++ + +GL K+I + GD+ +ARQVFD +P P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQ 83
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLD 175
+F WN +I+GYSR + + + MY M + PDSFTFP LLK + L+ G+ +
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 176 HAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE--VVTWNVMLSGYNRVXXX 233
+LG D+++FVQ I L++ C + A +F E +V+W ++S Y +
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 234 XXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE-GI-VEPNLVMEN 291
V P+ V LV +L+A + L DL G ++ + + G+ +EP+L++
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI-- 261
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
S+ + +A GQ+ A+ FD+M + +
Sbjct: 262 -------------------------------SLNTMYAKCGQVATAKILFDKMKSPNLIL 290
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
W AMI GY + + REA+ +F EM V+PD ++ S ++ACA +G+LE + Y+
Sbjct: 291 WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG 350
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
++ +D FI SALIDM+ KCG+VE AR F +D +W+AMIVG ++G EA++
Sbjct: 351 RSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAIS 410
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
++ M + P+D+T++G+L AC H+GMV +G FF M H I P HY C++DLL
Sbjct: 411 LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLL 469
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYV 591
RAGHL +A +VI MPV+P VWG+LL AC+ H++VEL E AA+Q+ ++P N YV
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529
Query: 592 LLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYA 651
L N+YAA + W+ + EVR M E+G+ K GCS +E+ G + F GD+SHP+ +EI
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIER 589
Query: 652 KLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVK 711
++E + L G+ + D+ +E+ E L HSE++AIAY LIS+ G +RI K
Sbjct: 590 QVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITK 649
Query: 712 NLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
NLR CV+CH KL+SK +RE+VVRD RFHHF+ GVCSC ++W
Sbjct: 650 NLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 509 bits (1312), Expect = e-144, Method: Compositional matrix adjust.
Identities = 260/691 (37%), Positives = 402/691 (58%), Gaps = 33/691 (4%)
Query: 66 QLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
LKQIH I L D N ++ T Y+ +F P++F++N++I G
Sbjct: 28 HLKQIHVSLINHHLHHDTFLVNLLLKR--TLFFRQTKYSYLLFSHTQFPNIFLYNSLING 85
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+ + ++L + H + FTFP +LK T + K G L VK G + +
Sbjct: 86 FVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHD 145
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
+ + + ++S G ++ AHK+F+ VVTW + SGY
Sbjct: 146 VAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVE 205
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
GV P+S +V +LSAC + DL G ++ +Y+ E ++ N + L++++ CG+M+
Sbjct: 206 MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A+ VFD+M +D+++W++++ G+A+ + P
Sbjct: 266 ARSVFDSMVEKDIVTWSTMIQGYAS-----------NSFP-------------------- 294
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
+E + LF +M ++KPD+F++V L++CA LGAL+LGEW + ID+++ + F+ +AL
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
IDMY KCG + + + FKEM +KD I A I GLA NGH + + +F + I+PD
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
T++G+L C HAG+++ G +FF +++ + +K V HYGCMVDL RAG L +A +I
Sbjct: 415 STFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLIC 474
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
+MP++PN+IVWG+LL CR+ K+ +LAE K++I LEP N YV L NIY+ RW+
Sbjct: 475 DMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDE 534
Query: 606 LREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGY 665
EVR +M ++G+KK PG S +E+ G ++EF+A D+SHP S +IYAKLE++ ++ G+
Sbjct: 535 AAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGF 594
Query: 666 SPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKL 725
P T VF D+ EE+KE L HSEKLA+A LIS+ G IR+VKNLR+C DCH++ KL
Sbjct: 595 VPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKL 654
Query: 726 VSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+SK RE+VVRD RFH F +G CSCN++W
Sbjct: 655 ISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 496 bits (1278), Expect = e-140, Method: Compositional matrix adjust.
Identities = 267/776 (34%), Positives = 423/776 (54%), Gaps = 77/776 (9%)
Query: 53 TPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
T + +R S L Q H++ I G +D K+ + G + YAR +F ++
Sbjct: 22 TYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRL--SDLGAIYYARDIFLSVQ 79
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYL-LMLAHNIKPDSFTFPFLLK---GFTNDMALK 168
P VF++N +++G+S P S +S++ L + ++KP+S T+ F + GF +D A
Sbjct: 80 RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA-- 137
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
G+V+ AV G DS L + + ++ V+ A K+F+ + + WN M+SGY
Sbjct: 138 -GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYR 196
Query: 229 RVXXXXXXXXXXXXXXXXGVSP-NSVTLVLILSACSKLTDL-----------AGGNYVYQ 276
+ + ++ TL+ IL A ++L +L G Y +
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 277 YLTEGIV--------------------EPNLVMENVLLDMFGACGEMDAAKGVFD----- 311
Y+ G + +P++V N ++ + + GE + + +F
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 312 --NMKTRDVISW-----------------------------TSIVSGFANTGQIDLARKY 340
+++ ++S T++ + ++ +I+ ARK
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKL 376
Query: 341 FDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
FD+ PE+ SW AMI GY + +A++LFREMQ S P+ T+ IL+ACA LGAL
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGL 460
LG+WV + + ++ +ALI MY KCG++ +AR+ F M +K++ W MI G
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGY 496
Query: 461 AINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN 520
++G G+EAL +F M+ S ITP +T++ VL AC+HAG+V++G + F SM ++G +P+
Sbjct: 497 GLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556
Query: 521 VTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQII 580
V HY CMVD+L RAGHL+ AL I M ++P S VW +LLGACR+HK+ LA ++++
Sbjct: 557 VKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLF 616
Query: 581 ELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGD 640
EL+P+N +VLL NI++A + + VR +R + K PG +L+E+ + F +GD
Sbjct: 617 ELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGD 676
Query: 641 QSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALIS 700
QSHPQ KEIY KLE + + AGY P+T D+ EE++E + HSE+LAIA+ LI+
Sbjct: 677 QSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIA 736
Query: 701 SGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+ PG IRI+KNLR+C+DCH + KL+SK R +VVRD RFHHF+ GVCSC ++W
Sbjct: 737 TEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 492 bits (1267), Expect = e-139, Method: Compositional matrix adjust.
Identities = 232/516 (44%), Positives = 347/516 (67%), Gaps = 7/516 (1%)
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
VSP+ T +L + L G + + ++ + + LL+M+ +CG++ +A+
Sbjct: 58 VSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQ 117
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
VFD+ ++D+ +W S+V+ +A G ID ARK FD+MPER+ +SW+ +I+GY+ ++E
Sbjct: 118 RVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKE 177
Query: 368 ALALFREMQM-----SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIG 422
AL LFREMQ+ + V+P+EFTM ++L+AC LGALE G+WV YIDK + D +G
Sbjct: 178 ALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLG 237
Query: 423 SALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIES-S 480
+ALIDMY KCG++E+A++ F + +KD ++AMI LA+ G +E +FS M S +
Sbjct: 238 TALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN 297
Query: 481 ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA 540
I P+ +T++G+L AC H G++ +G+ +F M + GI P++ HYGCMVDL R+G +KEA
Sbjct: 298 INPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEA 357
Query: 541 LDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAAC 600
I +MP++P+ ++WGSLL R+ +++ E A K++IEL+P N YVLL N+YA
Sbjct: 358 ESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKT 417
Query: 601 KRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDL 660
RW ++ +R M +GI K PGCS +E+ G+++EFV GD+S +S+ IYA L+ +MQ L
Sbjct: 418 GRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRL 477
Query: 661 TNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCH 720
AGY DT EV LD+ E+DKE AL HSEKLAIA+ L+ + PG +RI+KNLR+C DCH
Sbjct: 478 REAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCH 537
Query: 721 QMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+ K++SK ++RE+VVRD RFHHFR G CSC +FW
Sbjct: 538 LVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 184/423 (43%), Gaps = 77/423 (18%)
Query: 101 VDYARQVFDTIPHPSV--FIWNTMIKG-YSRISCPK--SGISMYLLMLAHNIKPDSFTFP 155
+ YA +F I H + F+WN +I+ +S P+ S IS+YL M H + PD TFP
Sbjct: 8 IAYANPIFH-IRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFP 66
Query: 156 FLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLC---------------- 199
FLL F N + L G+ + GLD + FV+ + ++++S C
Sbjct: 67 FLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK 126
Query: 200 ---------------GLVDLAHKIFNMGDAWEVVTWNVMLSGY-----NRVXXXXXXXXX 239
GL+D A K+F+ V++W+ +++GY +
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 240 XXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGA 299
V PN T+ +LSAC +L L G +V+ Y+ + VE ++V+ L+DM+
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 300 CGEMDAAKGVFDNMKT-RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
CG ++ AK VF+ + + +DV ++++++ A G D
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTD----------------------- 283
Query: 359 YLRMNHFREALALFREMQMS-HVKPDEFTMVSILTACAHLGALELGE-WVKTYIDKNKIN 416
E LF EM S ++ P+ T V IL AC H G + G+ + K I++ I
Sbjct: 284 --------ECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGIT 335
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEALTMFSN 475
++D+Y + G +++A M + D IW +++ G + G +
Sbjct: 336 PSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKR 395
Query: 476 MIE 478
+IE
Sbjct: 396 LIE 398
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 196/466 (42%), Gaps = 44/466 (9%)
Query: 56 SLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS 115
SLL S L+ G P + + V A+ ++G +D AR++FD +P +
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA---KAGLIDDARKLFDEMPERN 158
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHN-----IKPDSFTFPFLLKGFTNDMALKYG 170
V W+ +I GY K + ++ M ++P+ FT +L AL+ G
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG 218
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN-MGDAWEVVTWNVM---LSG 226
K + + K ++ ++ + A I +++ CG ++ A ++FN +G +V ++ M L+
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAM 278
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEP 285
Y ++PNSVT V IL AC + G ++ + E + P
Sbjct: 279 YG--LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITP 336
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTGQIDLARKYFDQM 344
++ ++D++G G + A+ +M DV+ W S++SG G I ++
Sbjct: 337 SIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
Query: 345 PERDYVSWTAMI---DGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALE 401
E D ++ A + + Y + + E + EM++ + + C++ +E
Sbjct: 397 IELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINK--------VPGCSY---VE 445
Query: 402 LGEWVKTYIDKNKINNDTFIGSALIDMYFK----CGNVEKARKTFKEMHQKDKFIWTAMI 457
+ V ++ ++ ++ A++D + G V ++ ++++KDK I
Sbjct: 446 VEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEI----- 500
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEK 503
A++ H E+ F M TP + I L C +V K
Sbjct: 501 ---ALSYHSEKLAIAFCLMKTRPGTP--VRIIKNLRICGDCHLVMK 541
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 108/272 (39%), Gaps = 72/272 (26%)
Query: 369 LALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDM 428
++++ M+ V PD T +L + + L LG+ I ++ D F+ ++L++M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 429 YFKCGN-------------------------------VEKARKTFKEMHQKDKFIWTAMI 457
Y CG+ ++ ARK F EM +++ W+ +I
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 458 VGLAINGHGEEALTMFSNMI-----ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMT 512
G + G +EAL +F M E+ + P++ T VLSAC G +E+G+ A +
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 513 IQH-------------------------------GIKPNVTHYGCMVDLLSRAGHLKEAL 541
H G K +V Y M+ L+ G E
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 542 DVILNMP----VKPNSIVWGSLLGACRVHKNV 569
+ M + PNS+ + +LGAC VH+ +
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGAC-VHRGL 317
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 491 bits (1263), Expect = e-139, Method: Compositional matrix adjust.
Identities = 229/553 (41%), Positives = 348/553 (62%), Gaps = 1/553 (0%)
Query: 205 AHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK 264
A +F+ D + WN+M+ G++ N+ T +L ACS
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 265 LTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSI 324
L+ ++ +T+ E ++ N L++ + G A +FD + D +SW S+
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 325 VSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
+ G+ G++D+A F +M E++ +SWT MI GY++ + +EAL LF EMQ S V+PD
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 385 FTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE 444
++ + L+ACA LGALE G+W+ +Y++K +I D+ +G LIDMY KCG +E+A + FK
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 445 MHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG 504
+ +K WTA+I G A +GHG EA++ F M + I P+ IT+ VL+AC++ G+VE+G
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 505 RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACR 564
+ F SM + +KP + HYGC+VDLL RAG L EA I MP+KPN+++WG+LL ACR
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 565 VHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGC 624
+HKN+EL E + +I ++P +G YV NI+A K+W+ E R +M E+G+ K PGC
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 625 SLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEED-KET 683
S + + G +EF+AGD+SHP+ ++I +K M + L GY P+ E+ LD+ ++D +E
Sbjct: 488 STISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREA 547
Query: 684 ALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFH 743
+ +HSEKLAI Y LI + PG IRI+KNLR+C DCH++ KL+SK Y R++V+RD+TRFH
Sbjct: 548 IVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFH 607
Query: 744 HFRHGVCSCNNFW 756
HFR G CSC ++W
Sbjct: 608 HFRDGKCSCGDYW 620
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 220/458 (48%), Gaps = 69/458 (15%)
Query: 48 HCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGD-VDYARQ 106
H ET +S L+RC +LKQIH++ +K GL D K ++FC + S D + YA+
Sbjct: 12 HNLYET-MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQI 70
Query: 107 VFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMA 166
VFD P F+WN MI+G+S P+ + +Y ML + +++TFP LLK +N A
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 167 LKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWN----- 221
+ + KLG +++++ + I+ +++ G LAH +F+ + V+WN
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 222 --------------------------VMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTL 255
M+SGY + V P++V+L
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 256 VLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKT 315
LSAC++L L G +++ YL + + + V+ VL+DM+ CGEM+ A VF N+K
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 316 RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM 375
+ V +WT+++SG+A G H REA++ F EM
Sbjct: 311 KSVQAWTALISGYAYHG-------------------------------HGREAISKFMEM 339
Query: 376 QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIG-SALIDMYFKCGN 434
Q +KP+ T ++LTAC++ G +E G+ + ++++ T ++D+ + G
Sbjct: 340 QKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGL 399
Query: 435 VEKARKTFKEMHQK-DKFIWTAMIVGLAINGH---GEE 468
+++A++ +EM K + IW A++ I+ + GEE
Sbjct: 400 LDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/605 (39%), Positives = 377/605 (62%), Gaps = 19/605 (3%)
Query: 163 NDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLC----------GLVDLAHKIFNMG 212
+D+ + +G +L H + S++FV L +LC L+ A+ IF+
Sbjct: 26 SDLKIIHGFLLRTHLI-----SDVFVAS---RLLALCVDDSTFNKPTNLLGYAYGIFSQI 77
Query: 213 DAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGN 272
+ +N+++ ++ + P+++T ++ A S++ + G
Sbjct: 78 QNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGE 137
Query: 273 YVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTG 332
+ + + ++ +EN L+ M+ CG + AA +F M RDV+SWTS+V+G+ G
Sbjct: 138 QTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCG 197
Query: 333 QIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILT 392
++ AR+ FD+MP R+ +W+ MI+GY + N F +A+ LF M+ V +E MVS+++
Sbjct: 198 MVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVIS 257
Query: 393 ACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFI 452
+CAHLGALE GE Y+ K+ + + +G+AL+DM+++CG++EKA F+ + + D
Sbjct: 258 SCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLS 317
Query: 453 WTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMT 512
W+++I GLA++GH +A+ FS MI P D+T+ VLSAC+H G+VEKG + + +M
Sbjct: 318 WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMK 377
Query: 513 IQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA 572
HGI+P + HYGC+VD+L RAG L EA + IL M VKPN+ + G+LLGAC+++KN E+A
Sbjct: 378 KDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVA 437
Query: 573 EMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGI 632
E +I+++PE+ YVLL NIYA +W+ + +R +M E+ +KK PG SL+E++G
Sbjct: 438 ERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGK 497
Query: 633 IYEFVAG-DQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEK 691
I +F G DQ HP+ +I K E ++ + GY +T + F D+ EE+KE+++ HSEK
Sbjct: 498 INKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEK 557
Query: 692 LAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCS 751
LAIAY ++ + PG TIRIVKNLR+C DCH + KL+S+ Y REL+VRD+ RFHHFR+GVCS
Sbjct: 558 LAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCS 617
Query: 752 CNNFW 756
C ++W
Sbjct: 618 CRDYW 622
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 203/481 (42%), Gaps = 69/481 (14%)
Query: 50 FGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGD-----VDYA 104
F ++LL+ C S LK IH ++ L SD ++++A C + + + YA
Sbjct: 11 FKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYA 70
Query: 105 RQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTND 164
+F I +P++F++N +I+ +S + P Y ML I PD+ TFPFL+K +
Sbjct: 71 YGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM 130
Query: 165 MALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV------ 218
+ G+ V+ G ++++V+ + +H+++ CG + A +IF +VV
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 219 -------------------------TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSV 253
TW++M++GY + GV N
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 254 TLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNM 313
+V ++S+C+ L L G Y+Y+ + + NL++ L+DMF CG+++ A VF+ +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 314 KTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFR 373
D +SW+SI+ G A G A YF QM ++
Sbjct: 311 PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI----------------------- 347
Query: 374 EMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNK-INNDTFIGSALIDMYFKC 432
P + T ++L+AC+H G +E G + + K+ I ++DM +
Sbjct: 348 --------PRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRA 399
Query: 433 GNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVL 492
G + +A +MH K ++G E NM+ + P+ Y +L
Sbjct: 400 GKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML-IKVKPEHSGYYVLL 458
Query: 493 S 493
S
Sbjct: 459 S 459
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 479 bits (1232), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/573 (40%), Positives = 346/573 (60%), Gaps = 19/573 (3%)
Query: 202 VDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG---VSPNSVTLVLI 258
+D AHKIFN +WN ++ G++ V PN T +
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 259 LSACSKLTDLAGGNYVYQY-LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVF------- 310
L AC+K + G ++ L G VM N L+ M+ CG M A+ +F
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSN-LVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 311 -----DNMKTRD--VISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMN 363
+ + RD ++ W ++ G+ G AR FD+M +R VSW MI GY
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
F++A+ +FREM+ ++P+ T+VS+L A + LG+LELGEW+ Y + + I D +GS
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITP 483
ALIDMY KCG +EKA F+ + +++ W+AMI G AI+G +A+ F M ++ + P
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 484 DDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV 543
D+ YI +L+AC+H G+VE+GR++F+ M G++P + HYGCMVDLL R+G L EA +
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 544 ILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRW 603
ILNMP+KP+ ++W +LLGACR+ NVE+ + A ++++ P + YV L N+YA+ W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 604 ENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNA 663
+ E+R M E+ I+K PGCSL++++G+++EFV D SHP++KEI + L + L A
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Query: 664 GYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMA 723
GY P T++V L++ EEDKE L HSEK+A A+ LIS+ PG IRIVKNLR+C DCH
Sbjct: 554 GYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613
Query: 724 KLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
KL+SK Y R++ VRD+ RFHHF+ G CSC ++W
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/548 (23%), Positives = 227/548 (41%), Gaps = 126/548 (22%)
Query: 58 LERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQE--SGDVDYARQVFDTIPHPS 115
+ C++ L QIH+ IK G D + +++ FC T + D+DYA ++F+ +P +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 116 VFIWNTMIKGYSRISCPKSGISM---YLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
F WNT+I+G+S K+ I++ Y +M ++P+ FTFP +LK ++ GK
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF----------------------- 209
+ A+K G + FV + ++ +CG + A +F
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 210 ----------NMGD------------AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+GD VV+WN M+SGY+
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
+ PN VTLV +L A S+L L G +++ Y + + + V+ + L+DM+ CG ++ A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
VF+ + +VI+W+++++GFA GQ +
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAG-------------------------------D 358
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
A+ F +M+ + V+P + +++LTAC+H G
Sbjct: 359 AIDCFCKMRQAGVRPSDVAYINLLTACSHGGL---------------------------- 390
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFI-----WTAMIVGLAINGHGEEALTMFSNMIESSIT 482
VE+ R+ F +M D + M+ L +G +EA NM I
Sbjct: 391 -------VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM---PIK 440
Query: 483 PDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALD 542
PDD+ + +L AC G VE G++ + + + + Y + ++ + G+ E +
Sbjct: 441 PDDVIWKALLGACRMQGNVEMGKR--VANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 498
Query: 543 VILNMPVK 550
+ L M K
Sbjct: 499 MRLRMKEK 506
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 9/292 (3%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
GD AR +FD + SV WNTMI GYS K + ++ M +I+P+ T +L
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV 218
+ +L+ G+ L +A G+ + + A I ++S CG+++ A +F V+
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVI 341
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK--LTDLAGGNYVYQ 276
TW+ M++G+ GV P+ V + +L+ACS L + G Y Q
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE-EGRRYFSQ 400
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTGQID 335
++ +EP + ++D+ G G +D A+ NM + D + W +++ G ++
Sbjct: 401 MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
Query: 336 LARK----YFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
+ ++ D +P D ++ A+ + Y ++ E + M+ ++ D
Sbjct: 461 MGKRVANILMDMVPH-DSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 477 bits (1228), Expect = e-134, Method: Compositional matrix adjust.
Identities = 262/770 (34%), Positives = 418/770 (54%), Gaps = 73/770 (9%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSV 116
LLERC S +L+QI K GL + F K+++ C G VD A +VF+ I
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC--RYGSVDEAARVFEPIDSKLN 100
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDH 176
+++TM+KG++++S + ++ M +++P + F +LLK ++ L+ GK +
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 177 AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXX 236
VK G +LF ++++ C V+ A K+F+ ++V+WN +++GY++
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 237 XXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY------------------- 277
+ P+ +T+V +L A S L ++ G ++ Y
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 278 ------------LTEGIVEPNLVMENVLLDMF---------------------------- 297
L +G++E N+V N ++D +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 298 ----GACGEM-DAAKGVFDNMKT------RDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
AC ++ D +G F + + R+V S++S + ++D A F ++
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
R VSW AMI G+ + +AL F +M+ VKPD FT VS++TA A L +W+
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHG 466
+ ++ ++ + F+ +AL+DMY KCG + AR F M ++ W AMI G +G G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 467 EEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGC 526
+ AL +F M + +I P+ +T++ V+SAC+H+G+VE G K F M + I+ ++ HYG
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 527 MVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPEN 586
MVDLL RAG L EA D I+ MPVKP V+G++LGAC++HKNV AE AA+++ EL P++
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 587 GSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQS 646
G +VLL NIY A WE + +VR M+ +G++KTPGCS++E+ ++ F +G +HP S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Query: 647 KEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVT 706
K+IYA LE ++ + AGY PDT+ V L + + KE L HSEKLAI++ L+++ G T
Sbjct: 701 KKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTT 759
Query: 707 IRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
I + KNLR+C DCH K +S RE+VVRD RFHHF++G CSC ++W
Sbjct: 760 IHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/696 (35%), Positives = 383/696 (55%), Gaps = 34/696 (4%)
Query: 62 KSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNT 121
+S + +Q+H +K G GN ++AF + VD AR+VFD + V WN+
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR--VDSARKVFDEMTERDVISWNS 266
Query: 122 MIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLG 181
+I GY + G+S+++ ML I+ D T + G + + G+ + VK
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 182 LDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXX 241
+ ++S CG +D A +F VV++ M++GY R
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 242 XXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACG 301
G+SP+ T+ +L+ C++ L G V++++ E + ++ + N L+DM+ CG
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 302 EMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLR 361
M A+ VF +M +D +SW +I GY +
Sbjct: 447 SMQEAELVFS-------------------------------EMRVKDIISWNTIIGGYSK 475
Query: 362 MNHFREALALFREM-QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTF 420
+ EAL+LF + + PDE T+ +L ACA L A + G + YI +N +D
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535
Query: 421 IGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS 480
+ ++L+DMY KCG + A F ++ KD WT MI G ++G G+EA+ +F+ M ++
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Query: 481 ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA 540
I D+I+++ +L AC+H+G+V++G +FF M + I+P V HY C+VD+L+R G L +A
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655
Query: 541 LDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAAC 600
I NMP+ P++ +WG+LL CR+H +V+LAE A+++ ELEPEN YVL+ NIYA
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 715
Query: 601 KRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDL 660
++WE ++ +R + +RG++K PGCS +E+ G + FVAGD S+P+++ I A L + +
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Query: 661 TNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCH 720
GYSP T +D E +KE AL HSEKLA+A +ISSG G IR+ KNLR+C DCH
Sbjct: 776 IEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCH 835
Query: 721 QMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+MAK +SK RE+V+RD RFH F+ G CSC FW
Sbjct: 836 EMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 155/363 (42%), Gaps = 43/363 (11%)
Query: 254 TLVLILSACSKLTDLAGGNYVYQYLTEG--IVEPNLVMENVLLDMFGACGEMDAAKGVFD 311
TL +L C+ L G V ++ +++ NL + L M+ CG++ A VFD
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSL--MYTNCGDLKEASRVFD 153
Query: 312 NMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALAL 371
+K + W +++ A +G F ++ L
Sbjct: 154 EVKIEKALFWNILMNELAKSGD-------------------------------FSGSIGL 182
Query: 372 FREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFK 431
F++M S V+ D +T + + + L ++ GE + +I K+ +G++L+ Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 432 CGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGV 491
V+ ARK F EM ++D W ++I G NG E+ L++F M+ S I D T + V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 492 LSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKP 551
+ C + ++ GR S+ ++ ++D+ S+ G L A V M +
Sbjct: 303 FAGCADSRLISLGRAVH-SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR- 360
Query: 552 NSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGS--VYVLLCNIYAACKRWENLREV 609
+ + + S++ + LA A K E+E E S VY + + C R+ L E
Sbjct: 361 SVVSYTSMIAG---YAREGLAGEAVKLFEEMEEEGISPDVYTVTA-VLNCCARYRLLDEG 416
Query: 610 RTI 612
+ +
Sbjct: 417 KRV 419
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
D T+ S+L CA +L+ G+ V +I N D+ +GS L MY CG++++A + F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITY 488
E+ + W ++ LA +G ++ +F M+ S + D T+
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/712 (35%), Positives = 398/712 (55%), Gaps = 78/712 (10%)
Query: 48 HCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQV 107
HC +SLL CK+ L QIH IK G+ +D F K+I C S + YAR++
Sbjct: 7 HC-----LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRL 61
Query: 108 FDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN-IKPDSFTFPFLLKGFTNDMA 166
P P F++NT+++GYS P + +++++ M+ + PDSF+F F++K N +
Sbjct: 62 LLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRS 121
Query: 167 LKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG 226
L+ G + A+K GL+S+LFV I ++ CG V+ A K+F+ +V WN
Sbjct: 122 LRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA---- 177
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN 286
+++AC + D+AG ++ + ++ N
Sbjct: 178 -------------------------------VITACFRGNDVAGAREIF----DKMLVRN 202
Query: 287 LVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
NV+L + GE+++AK +F M RD +SW++++ G A+ G
Sbjct: 203 HTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS------------- 249
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
F E+ FRE+Q + + P+E ++ +L+AC+ G+ E G+ +
Sbjct: 250 ------------------FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL 291
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFI-WTAMIVGLAINGH 465
+++K + + +ALIDMY +CGNV AR F+ M +K + WT+MI GLA++G
Sbjct: 292 HGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ 351
Query: 466 GEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYG 525
GEEA+ +F+ M +TPD I++I +L AC+HAG++E+G +F+ M + I+P + HYG
Sbjct: 352 GEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYG 411
Query: 526 CMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPE 585
CMVDL R+G L++A D I MP+ P +IVW +LLGAC H N+ELAE +++ EL+P
Sbjct: 412 CMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPN 471
Query: 586 NGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQ 645
N VLL N YA +W+++ +R M+ + IKKT SL+E+ +Y+F AG++
Sbjct: 472 NSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGI 531
Query: 646 SKEIYAKLENMMQDLTN-AGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPG 704
E + KL+ ++ L + AGY+P+ + D+ EE+KE + +HSEKLA+A+AL G
Sbjct: 532 DIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKG 591
Query: 705 VTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
IRIVKNLR+C DCH + KL SK Y E++VRD+ RFH F+ G CSC ++W
Sbjct: 592 ANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 469 bits (1206), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/695 (35%), Positives = 384/695 (55%), Gaps = 35/695 (5%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
+ GD+D + FD +P W TMI GY I I + M+ I+P FT
Sbjct: 92 KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCG---------------- 200
+L ++ GK + VKLGL N+ V + +++++ CG
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 201 ---------------LVDLAHKIFNMGDAWEVVTWNVMLSGYN-RVXXXXXXXXXXXXXX 244
+DLA F ++VTWN M+SG+N R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 245 XXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMD 304
+SP+ TL +LSAC+ L L G ++ ++ + + ++ N L+ M+ CG ++
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 305 AAKGVFDNMKTRD--VISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRM 362
A+ + + T+D + +T+++ G+ G ++ A+ F + +RD V+WTAMI GY +
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 363 NHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIG 422
+ EA+ LFR M +P+ +T+ ++L+ + L +L G+ + K+ +
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 423 SALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSI 481
+ALI MY K GN+ A + F + ++D WT+MI+ LA +GH EEAL +F M+ +
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 482 TPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEAL 541
PD ITY+GV SACTHAG+V +GR++F M I P ++HY CMVDL RAG L+EA
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 542 DVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACK 601
+ I MP++P+ + WGSLL ACRVHKN++L ++AA++++ LEPEN Y L N+Y+AC
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 602 RWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLT 661
+WE ++R M + +KK G S +E+ ++ F D +HP+ EIY ++ + ++
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Query: 662 NAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQ 721
GY PDT+ V D+ EE KE L HSEKLAIA+ LIS+ T+RI+KNLR+C DCH
Sbjct: 692 KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHT 751
Query: 722 MAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
K +SK RE++VRD TRFHHF+ G CSC ++W
Sbjct: 752 AIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 212/450 (47%), Gaps = 41/450 (9%)
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX 246
F + +S G +D + F+ + V+W M+ GY +
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
G+ P TL +L++ + + G V+ ++ + + N+ + N LL+M+ CG+ A
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 307 KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
K VFD M RD+ SW ++++ GQ+DLA F+QM ERD V+W +MI G+ + +
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 367 EALALFREM-QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
AL +F +M + S + PD FT+ S+L+ACA+L L +G+ + ++I + + +AL
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 426 IDMYFKCGNVEKARK---------------------------------TFKEMHQKDKFI 452
I MY +CG VE AR+ F + +D
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 453 WTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMT 512
WTAMIVG +G EA+ +F +M+ P+ T +LS + + G++ S
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS-A 439
Query: 513 IQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA 572
++ G +V+ ++ + ++AG++ A + + +++ W S++ A H + E A
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 573 -EMAAKQIIE-LEPENGSVYVLLCNIYAAC 600
E+ ++E L P+ ++ +++AC
Sbjct: 500 LELFETMLMEGLRPD----HITYVGVFSAC 525
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 162/336 (48%), Gaps = 41/336 (12%)
Query: 249 SPNSVTLVLILSACSKL----TDLAGGNYVYQYLTEGIVEPNLVME----NVLLDMFGAC 300
+P ++L +L C+ L + + G + Q + +++ L+ N L++++
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 301 GEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYL 360
G A+ +FD M R SW +++S ++ G +D ++FDQ+P+RD VSWT MI GY
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 361 RMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTF 420
+ + +A+ + +M ++P +FT+ ++L + A +E G+ V ++I K + +
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 421 IGSALIDMYFKCGN-------------------------------VEKARKTFKEMHQKD 449
+ ++L++MY KCG+ ++ A F++M ++D
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 450 KFIWTAMIVGLAINGHGEEALTMFSNMIESS-ITPDDITYIGVLSACTHAGMVEKGRKFF 508
W +MI G G+ AL +FS M+ S ++PD T VLSAC + + G++
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 509 ASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
S + G + ++ + SR G ++ A +I
Sbjct: 303 -SHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 468 bits (1204), Expect = e-132, Method: Compositional matrix adjust.
Identities = 219/509 (43%), Positives = 337/509 (66%)
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
+ P++ T+ ++ AC+ L G V+ + + ++ L+ ++ G +D+
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
VF+++ D + T++V+ A G + ARK F+ MPERD ++W AMI GY ++ RE
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
AL +F MQ+ VK + M+S+L+AC LGAL+ G W +YI++NKI + + L+D
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
+Y KCG++EKA + F M +K+ + W++ + GLA+NG GE+ L +FS M + +TP+ +T
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
++ VL C+ G V++G++ F SM + GI+P + HYGC+VDL +RAG L++A+ +I M
Sbjct: 344 FVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Query: 548 PVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLR 607
P+KP++ VW SLL A R++KN+EL +A+K+++ELE N YVLL NIYA W+N+
Sbjct: 404 PMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVS 463
Query: 608 EVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSP 667
VR M +G++K PGCS+ME+NG ++EF GD+SHP+ +I A +++ + L AGY
Sbjct: 464 HVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKA 523
Query: 668 DTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVS 727
DT+ V DI EE+KE AL HSEK AIA+ ++S V IRIVKNLR+C DCHQ++ ++S
Sbjct: 524 DTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMIS 583
Query: 728 KAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
K +NRE++VRD+ RFHHF+ G CSCN FW
Sbjct: 584 KIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 199/445 (44%), Gaps = 71/445 (15%)
Query: 51 GETP-ISLLERCKSTYQLKQIHSKTIKMG-LSSDPVFGNKVIAFCCTQESGDVDYARQVF 108
G+ P I+LL+ + +++QIH+K G L D + G+ V A + +DYA Q+
Sbjct: 5 GKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKY-LDYANQIL 63
Query: 109 DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLA--HNIKPDSFTFPFLLKGFTNDMA 166
D P++F N+MI+ + + P+ Y +L+ +++KPD++T FL++ T
Sbjct: 64 DRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRM 123
Query: 167 LKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM--------------- 211
+ G + ++ G D++ VQ I L++ G +D HK+FN
Sbjct: 124 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTA 183
Query: 212 ----GDA------------WEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTL 255
GD + + WN M+SGY +V GV N V +
Sbjct: 184 CARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAM 243
Query: 256 VLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKT 315
+ +LSAC++L L G + + Y+ ++ + + L+D++ CG+M+ A VF M+
Sbjct: 244 ISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 316 RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE-ALALFRE 374
++V +W+S ++G A MN F E L LF
Sbjct: 304 KNVYTWSSALNGLA--------------------------------MNGFGEKCLELFSL 331
Query: 375 MQMSHVKPDEFTMVSILTACAHLGALELGEW-VKTYIDKNKINNDTFIGSALIDMYFKCG 433
M+ V P+ T VS+L C+ +G ++ G+ + ++ I L+D+Y + G
Sbjct: 332 MKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAG 391
Query: 434 NVEKARKTFKEMHQK-DKFIWTAMI 457
+E A ++M K +W++++
Sbjct: 392 RLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 461 bits (1187), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/555 (41%), Positives = 345/555 (62%), Gaps = 34/555 (6%)
Query: 205 AHKIFN-MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG-VSPNSVTLVLILSAC 262
AHK+F+ + V WN ++ GY + G V P++ T ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 263 SKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWT 322
+ + D+ G ++ + + ++N LL ++ CG DV S
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG---------------DVAS-- 174
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKP 382
A K FD+MPE+D V+W ++I+G+ EALAL+ EM +KP
Sbjct: 175 --------------AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 220
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
D FT+VS+L+ACA +GAL LG+ V Y+ K + + + L+D+Y +CG VE+A+ F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS-ITPDDITYIGVLSACTHAGMV 501
EM K+ WT++IVGLA+NG G+EA+ +F M + + P +IT++G+L AC+H GMV
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 340
Query: 502 EKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLG 561
++G ++F M ++ I+P + H+GCMVDLL+RAG +K+A + I +MP++PN ++W +LLG
Sbjct: 341 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 400
Query: 562 ACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKT 621
AC VH + +LAE A QI++LEP + YVLL N+YA+ +RW +++++R M+ G+KK
Sbjct: 401 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 460
Query: 622 PGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDK 681
PG SL+E+ ++EF+ GD+SHPQS IYAKL+ M L + GY P S V++D+ EE+K
Sbjct: 461 PGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEK 520
Query: 682 ETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTR 741
E A+ HSEK+AIA+ LIS+ I +VKNLR+C DCH KLVSK YNRE+VVRD++R
Sbjct: 521 ENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSR 580
Query: 742 FHHFRHGVCSCNNFW 756
FHHF++G CSC ++W
Sbjct: 581 FHHFKNGSCSCQDYW 595
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 228/454 (50%), Gaps = 52/454 (11%)
Query: 50 FGETPISLL---ERC---------KSTYQLKQIHSKTIKMGLS-SDPVFGNKVIAFCCTQ 96
F ET + LL E+C S +L+QIH+ +I+ G+S SD G +I + +
Sbjct: 4 FSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSL 63
Query: 97 ESGD-VDYARQVFDTIPHP-SVFIWNTMIKGYSRISCPKSGISMYLLMLAHN-IKPDSFT 153
S + YA +VF I P +VFIWNT+I+GY+ I S S+Y M ++PD+ T
Sbjct: 64 PSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHT 123
Query: 154 FPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGD 213
+PFL+K T ++ G+ + ++ G S ++VQ + +HL++ CG V A+K+F+
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183
Query: 214 AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY 273
++V WN +++G+ G+ P+ T+V +LSAC+K+ L G
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 274 VYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQ 333
V+ Y+ + + NL NVLLD++ CG ++ AK +FD M ++ +SWTS++ G A
Sbjct: 244 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA---- 299
Query: 334 IDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSH-VKPDEFTMVSILT 392
++G+ +EA+ LF+ M+ + + P E T V IL
Sbjct: 300 ----------------------VNGF-----GKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 393 ACAHLGALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH-QKDK 450
AC+H G ++ G E+ + ++ KI ++D+ + G V+KA + K M Q +
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 451 FIWTAMIVGLAINGHGEEALTMFSNMIESSITPD 484
IW ++ + HG+ L F+ + + P+
Sbjct: 393 VIWRTLLGACTV--HGDSDLAEFARIQILQLEPN 424
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/733 (32%), Positives = 395/733 (53%), Gaps = 70/733 (9%)
Query: 60 RCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIW 119
R KS Q KQ+H++ I+ S + I + A +F T+ P V W
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLSHT---SASIVISIYTNLKLLHEALLLFKTLKSPPVLAW 73
Query: 120 NTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVK 179
++I+ ++ S ++ ++ M A PD FP +LK T M L++G+ + V+
Sbjct: 74 KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133
Query: 180 LGLDSNLFVQKAFIHLFS-LCGL-----------------------------------VD 203
LG+D +L+ A +++++ L G+ +D
Sbjct: 134 LGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGID 193
Query: 204 LAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
++F + +VV++N +++GY + + P+S TL +L S
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 264 KLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTS 323
+ D+ G ++ Y+ ++ ++ + + L+DM+
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY-------------------------- 287
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
A + +I+ + + F ++ RD +SW +++ GY++ + EAL LFR+M + VKP
Sbjct: 288 -----AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 384 EFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK 443
S++ ACAHL L LG+ + Y+ + ++ FI SAL+DMY KCGN++ ARK F
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 444 EMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEK 503
M+ D+ WTA+I+G A++GHG EA+++F M + P+ + ++ VL+AC+H G+V++
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 504 GRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGAC 563
+F SMT +G+ + HY + DLL RAG L+EA + I M V+P VW +LL +C
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 564 RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPG 623
VHKN+ELAE A++I ++ EN YVL+CN+YA+ RW+ + ++R M ++G++K P
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 624 CSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKET 683
CS +EM + FV+GD+SHP +I L+ +M+ + GY DTS V D+ EE K
Sbjct: 583 CSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRE 642
Query: 684 ALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFH 743
LF HSE+LA+A+ +I++ PG TIR+ KN+R+C DCH K +SK RE++VRD +RFH
Sbjct: 643 LLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFH 702
Query: 744 HFRHGVCSCNNFW 756
HF G CSC ++W
Sbjct: 703 HFNRGNCSCGDYW 715
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/653 (36%), Positives = 373/653 (57%), Gaps = 36/653 (5%)
Query: 111 IPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYG 170
+ VF WN++I +R + + M ++ P +FP +K ++ + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN-- 228
K A G S++FV A I ++S CG ++ A K+F+ +V+W M+ GY+
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 229 ----RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
+ +S+ LV ++SACS++ ++ ++ + +
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 285 PNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQM 344
+ + N LLD + GE G + +ARK FDQ+
Sbjct: 216 RGVSVGNTLLDAYAKGGE-----------------------------GGVAVARKIFDQI 246
Query: 345 PERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKP-DEFTMVSILTACAHLGALELG 403
++D VS+ +++ Y + EA +FR + + V + T+ ++L A +H GAL +G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 404 EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAIN 463
+ + + + + +D +G+++IDMY KCG VE ARK F M K+ WTAMI G ++
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 464 GHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTH 523
GH +AL +F MI+S + P+ IT++ VL+AC+HAG+ +G ++F +M + G++P + H
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 524 YGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELE 583
YGCMVDLL RAG L++A D+I M +KP+SI+W SLL ACR+HKNVELAE++ ++ EL+
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 584 PENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSH 643
N Y+LL +IYA RW+++ VR IM RG+ K PG SL+E+NG ++ F+ GD+ H
Sbjct: 487 SSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEH 546
Query: 644 PQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGP 703
PQ ++IY L + + L AGY +TS V D+ EE+KE L HSEKLAIA+ ++++ P
Sbjct: 547 PQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVP 606
Query: 704 GVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
G T+ +VKNLR+C DCH + KL+SK +RE VVRD RFHHF+ G CSC ++W
Sbjct: 607 GSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 183/435 (42%), Gaps = 47/435 (10%)
Query: 58 LERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
++ C S + + KQ H + G SD + +I T G ++ AR+VFD IP
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYST--CGKLEDARKVFDEIPKR 140
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTF------PFLLKGFTNDMALK 168
++ W +MI+GY +S++ +L D F ++ + A
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGL--VDLAHKIFNMGDAWEVVTWNVMLSG 226
+ + +K G D + V + ++ G V +A KIF+ + V++N ++S
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 227 YNRVXXXXXXXXXXXXXXXXGV-SPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEP 285
Y + V + N++TL +L A S L G ++ + +E
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMP 345
++++ ++DM+ CG ++ A+ FD MK ++V SWT++++G+ G
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG------------- 367
Query: 346 ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGA-LELGE 404
H +AL LF M S V+P+ T VS+L AC+H G +E
Sbjct: 368 ------------------HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
Query: 405 WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-DKFIWTAMIVGLAIN 463
W + + ++D+ + G ++KA + M K D IW++++ I+
Sbjct: 410 WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Query: 464 GHGEEALTMFSNMIE 478
+ E A + + E
Sbjct: 470 KNVELAEISVARLFE 484
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 129/297 (43%), Gaps = 3/297 (1%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
IS R + + IHS IK G GN ++ G V AR++FD I
Sbjct: 190 ISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK 249
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKP-DSFTFPFLLKGFTNDMALKYGKVL 173
+N+++ Y++ ++ ++ + + ++ T +L ++ AL+ GK +
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXX 233
D +++GL+ ++ V + I ++ CG V+ A K F+ V +W M++GY
Sbjct: 310 HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHA 369
Query: 234 XXXXXXXXXXXXXGVSPNSVTLVLILSACSKL-TDLAGGNYVYQYLTEGIVEPNLVMENV 292
GV PN +T V +L+ACS + G + VEP L
Sbjct: 370 AKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGC 429
Query: 293 LLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
++D+ G G + A + MK + D I W+S+++ ++LA ++ E D
Sbjct: 430 MVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 46/327 (14%)
Query: 336 LARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
L +Y D+ D SW ++I R EAL F M+ + P + + AC+
Sbjct: 31 LFNRYVDKT---DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACS 87
Query: 396 HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTA 455
L + G+ +D F+ SALI MY CG +E ARK F E+ +++ WT+
Sbjct: 88 SLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTS 147
Query: 456 MIVGLAINGHGEEALTMFSNMIESSITPDDITY------IGVLSACTHA---GMVEKGRK 506
MI G +NG+ +A+++F +++ DD + + V+SAC+ G+ E
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 507 FFASMTIQHGIKPNVT-----------------------------HYGCMVDLLSRAGHL 537
F G+ T Y ++ + +++G
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 538 KEALDV----ILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVY-VL 592
EA +V + N V N+I ++L A + + + Q+I + E+ +
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 593 LCNIYAACKRWENLREVRTIMMERGIK 619
+ ++Y C R E R+ M + ++
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVR 354
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/682 (35%), Positives = 378/682 (55%), Gaps = 31/682 (4%)
Query: 98 SGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFL 157
+G+ + AR++FD +P + WN MIKGY R ++ +M + D ++ +
Sbjct: 108 NGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTM 163
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
L G+ + + + + D + N A + + ++ A +F + W +
Sbjct: 164 LSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 218 VTWNVMLSGY-NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSA----CSKLTDLAGGN 272
V+WN +L G+ + VS N++ S +L D +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 273 YVYQY------------------LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMK 314
V+ + L + + E N V N +L + M+ AK +FD M
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 315 TRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFRE 374
R+V +W ++++G+A G+I A+ FD+MP+RD VSW AMI GY + H EAL LF +
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 375 MQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGN 434
M+ + + + S L+ CA + ALELG+ + + K F+G+AL+ MY KCG+
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 435 VEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSA 494
+E+A FKEM KD W MI G + +G GE AL F +M + PDD T + VLSA
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 495 CTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSI 554
C+H G+V+KGR++F +MT +G+ PN HY CMVDLL RAG L++A +++ NMP +P++
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 555 VWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMM 614
+WG+LLGA RVH N ELAE AA +I +EPEN +YVLL N+YA+ RW ++ ++R M
Sbjct: 580 IWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMR 639
Query: 615 ERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFL 674
++G+KK PG S +E+ + F GD+ HP+ EI+A LE + + AGY TS V
Sbjct: 640 DKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLH 699
Query: 675 DIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNREL 734
D+ EE+KE + HSE+LA+AY ++ G IR++KNLR+C DCH K +++ R +
Sbjct: 700 DVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLI 759
Query: 735 VVRDKTRFHHFRHGVCSCNNFW 756
++RD RFHHF+ G CSC ++W
Sbjct: 760 ILRDNNRFHHFKDGSCSCGDYW 781
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 165/377 (43%), Gaps = 41/377 (10%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
+SG +D ARQ+FD P VF W M+ GY + + ++ M N ++
Sbjct: 262 QSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----EVSWNA 317
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
+L G+ ++ K L D + N+ I ++ CG + A +F+ +
Sbjct: 318 MLAGYVQGERMEMAKELFD----VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 373
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
V+W M++GY++ G N + LS C+ + L G ++
Sbjct: 374 PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG 433
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDL 336
L +G E + N LL M+ CG ++ A +F M +D++SW ++++G++ G ++
Sbjct: 434 RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 337 ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAH 396
A ++F+ M RE L KPD+ TMV++L+AC+H
Sbjct: 494 ALRFFESMK--------------------REGL-----------KPDDATMVAVLSACSH 522
Query: 397 LGALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQKDKFIWT 454
G ++ G ++ T + ++ + ++D+ + G +E A K M + D IW
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582
Query: 455 AMIVGLAINGHGEEALT 471
++ ++G+ E A T
Sbjct: 583 TLLGASRVHGNTELAET 599
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 151/354 (42%), Gaps = 69/354 (19%)
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV 350
NV + + G + A VF M +S+ ++SG+ G+ +LARK FD+MPERD V
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 351 SWTAMIDGYLRMNHFREALALFREMQMSHV---------------------------KPD 383
SW MI GY+R + +A LF M V + +
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKN 187
Query: 384 EFTMVSILTACAHLGALE-------------LGEW---VKTYIDKNKI-----------N 416
+ + ++L+A +E L W + ++ K KI
Sbjct: 188 DVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNV 247
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM 476
D + +I Y + G +++AR+ F E +D F WTAM+ G N EEA +F M
Sbjct: 248 RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 477 IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
E +++++ +L+ +E ++ F M + NV+ + M+ ++ G
Sbjct: 308 PER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGK 358
Query: 537 LKEALDVILNMPVKPNSIVWGSLL-GACRVHKNVELAEMAAKQIIELEPENGSV 589
+ EA ++ MP K + + W +++ G + + E A + +++E E G +
Sbjct: 359 ISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSFE----ALRLFVQMEREGGRL 407
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 4/251 (1%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
+ G + A+ +FD +P W MI GYS+ + +++ M + + +F
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
L + +AL+ GK L VK G ++ FV A + ++ CG ++ A+ +F +
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD 474
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK--LTDLAGGNYV 274
+V+WN M++GY+R G+ P+ T+V +LSACS L D G Y
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD-KGRQYF 533
Query: 275 YQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTGQ 333
Y + V PN ++D+ G G ++ A + NM D W +++ G
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Query: 334 IDLARKYFDQM 344
+LA D++
Sbjct: 594 TELAETAADKI 604
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 25/304 (8%)
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
D+ W +S + TG+ + A + F +MP VS+ MI GYLR F A LF EM
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 377 MSHVKPDEFTMVSILTACAHLG-ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNV 435
+ M+ +LG A EL E + D + ++ Y + G V
Sbjct: 123 ERDLVSWN-VMIKGYVRNRNLGKARELFEIMP--------ERDVCSWNTMLSGYAQNGCV 173
Query: 436 EKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSAC 495
+ AR F M +K+ W A++ N EEA +F + ++ +++ +L
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGF 229
Query: 496 THAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIV 555
+ + R+FF SM ++ +V + ++ +++G + EA + PV+ +
Sbjct: 230 VKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQ-DVFT 283
Query: 556 WGSLLGACRVHKNVELAEMAAKQIIELEPENGSV-YVLLCNIYAACKRWENLREVRTIMM 614
W +++ ++ VE A+++ + PE V + + Y +R E +E+ +M
Sbjct: 284 WTAMVSGYIQNRMVE----EARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 615 ERGI 618
R +
Sbjct: 340 CRNV 343
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 8/180 (4%)
Query: 56 SLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
S L C L KQ+H + +K G + GN ++ C + G ++ A +F +
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC--KCGSIEEANDLFKEMA 471
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
+ WNTMI GYSR + + + M +KPD T +L ++ + G+
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 173 LLDHAVK-LGLDSNLFVQKAFIHLFSLCGLVDLAHKIF-NMGDAWEVVTWNVMLSGYNRV 230
+ G+ N + L GL++ AH + NM + W +L G +RV
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL-GASRV 590
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/732 (32%), Positives = 401/732 (54%), Gaps = 51/732 (6%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIA----FCCTQESGDVDYARQVFDTIPHPSVFIWNTMIK 124
Q H++ +K G +D K+IA + C + A V +IP P+++ ++++I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFND------ADLVLQSIPDPTIYSFSSLIY 89
Query: 125 GYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDS 184
++ I ++ M +H + PDS P L K A K GK + + GLD
Sbjct: 90 ALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 185 NLFVQKAFIHLFSLCGLVDLAHKIFNM--------------------------------- 211
+ FVQ + H++ CG + A K+F+
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 212 --GDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLA 269
G +V+WN +LSG+NR G P+ VT+ +L + L
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
Query: 270 GGNYVYQY-LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGF 328
G ++ Y + +G+++ V+ + ++DM+G G + +F+ + + + ++G
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 329 ANTGQIDLARKYFD----QMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
+ G +D A + F+ Q E + VSWT++I G + EAL LFREMQ++ VKP+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 385 FTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE 444
T+ S+L AC ++ AL G + + + ++ +GSALIDMY KCG + ++ F
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 445 MHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG 504
M K+ W +++ G +++G +E +++F +++ + + PD I++ +LSAC G+ ++G
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 505 RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACR 564
K+F M+ ++GIKP + HY CMV+LL RAG L+EA D+I MP +P+S VWG+LL +CR
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 565 VHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGC 624
+ NV+LAE+AA+++ LEPEN YVLL NIYAA W + +R M G+KK PGC
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 625 SLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETA 684
S +++ +Y +AGD+SHPQ +I K++ + +++ +G+ P+ D+ E+++E
Sbjct: 629 SWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQM 688
Query: 685 LFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHH 744
L+ HSEKLA+ + L+++ G ++++KNLR+C DCH + K +S RE+ +RD RFHH
Sbjct: 689 LWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHH 748
Query: 745 FRHGVCSCNNFW 756
F+ G+CSC +FW
Sbjct: 749 FKDGICSCGDFW 760
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/691 (34%), Positives = 387/691 (56%), Gaps = 37/691 (5%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVI-AFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
+Q+H +K+GL N +I +C ++ G +AR VFD + + WN++I G
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFG---FARTVFDNMSERDLISWNSVIAGI 391
Query: 127 SRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN-DMALKYGKVLLDHAVKLGLDSN 185
++ + +++ +L +KPD +T +LK ++ L K + HA+K+ S+
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
FV A I +S + A +F + +++V WN M++GY +
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
G + TL + C L + G V+ Y + + +L + + +LDM+ CG+M A
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A+ FD++ D ++WT+++SG G+ ER
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGE-----------EER------------------ 601
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
A +F +M++ V PDEFT+ ++ A + L ALE G + K ND F+G++L
Sbjct: 602 --AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSL 659
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
+DMY KCG+++ A FK + + W AM+VGLA +G G+E L +F M I PD
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDK 719
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
+T+IGVLSAC+H+G+V + K SM +GIKP + HY C+ D L RAG +K+A ++I
Sbjct: 720 VTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIE 779
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
+M ++ ++ ++ +LL ACRV + E + A +++ELEP + S YVLL N+YAA +W+
Sbjct: 780 SMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDE 839
Query: 606 LREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGY 665
++ RT+M +KK PG S +E+ I+ FV D+S+ Q++ IY K+++M++D+ GY
Sbjct: 840 MKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGY 899
Query: 666 SPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKL 725
P+T +D+ EE+KE AL+ HSEKLA+A+ L+S+ P IR++KNLR+C DCH K
Sbjct: 900 VPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKY 959
Query: 726 VSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
++K YNRE+V+RD RFH F+ G+CSC ++W
Sbjct: 960 IAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/515 (25%), Positives = 222/515 (43%), Gaps = 59/515 (11%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRIS-CPKSGISMYLLML----AHNIKPDSFT 153
G + YAR+VFD +P + WN+++ Y++ S C I L+ + T
Sbjct: 88 GSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMT 147
Query: 154 FPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGD 213
+LK + + + +A K+GLD + FV A ++++ G V +F
Sbjct: 148 LSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
Query: 214 AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLIL------SACSKLTD 267
+VV WN+ML Y + G++PN +TL L+ S ++
Sbjct: 208 YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKS 267
Query: 268 LAGGN-------------YVYQYLTEG-----------IVEPNLVMENV-LLDMFGACGE 302
A GN + +YL G +VE ++ + V + M +
Sbjct: 268 FANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVK 327
Query: 303 MD-----------AAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
+D A K D M T S+++ + + AR FD M ERD +S
Sbjct: 328 VDSLALGQQVHCMALKLGLDLMLTVS----NSLINMYCKLRKFGFARTVFDNMSERDLIS 383
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL-GALELGEWVKTYI 410
W ++I G + EA+ LF ++ +KPD++TM S+L A + L L L + V ++
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQV--HV 441
Query: 411 DKNKINN--DTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEE 468
KINN D+F+ +ALID Y + +++A F E H D W AM+ G + G +
Sbjct: 442 HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHK 500
Query: 469 ALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMV 528
L +F+ M + DD T V C + +G++ A I+ G ++ ++
Sbjct: 501 TLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA-YAIKSGYDLDLWVSSGIL 559
Query: 529 DLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGAC 563
D+ + G + A ++PV P+ + W +++ C
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLR-----MNHFREALALFREMQM 377
+++S ++ G + AR+ FD+MP+RD VSW +++ Y + + + ++A LFR ++
Sbjct: 79 NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQ 138
Query: 378 SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
V T+ +L C H G + E Y K ++ D F+ AL+++Y K G V++
Sbjct: 139 DVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198
Query: 438 ARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
+ F+EM +D +W M+ G EEA+ + S S + P++IT
Sbjct: 199 GKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 142/318 (44%), Gaps = 10/318 (3%)
Query: 66 QLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
Q KQ+H+ IK G D + ++ + GD+ A+ FD+IP P W TMI G
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYV--KCGDMSAAQFAFDSIPVPDDVAWTTMISG 592
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+ ++ M + PD FT L K + AL+ G+ + +A+KL ++
Sbjct: 593 CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND 652
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
FV + + +++ CG +D A+ +F + + WN ML G +
Sbjct: 653 PFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI--VEPNLVMENVLLDMFGACGEM 303
G+ P+ VT + +LSACS + L Y + G ++P + + L D G G +
Sbjct: 713 LGIKPDKVTFIGVLSACSH-SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLV 771
Query: 304 DAAKGVFDNMKTRDVIS-WTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRM 362
A+ + ++M S + ++++ G + ++ ++ E + + +A Y+ +
Sbjct: 772 KQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA----YVLL 827
Query: 363 NHFREALALFREMQMSHV 380
++ A + + EM+++
Sbjct: 828 SNMYAAASKWDEMKLART 845
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 187/478 (39%), Gaps = 62/478 (12%)
Query: 154 FPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN--LFVQKAFIHLFSLCGLVDLAHKIFNM 211
F FL T+ L GK HA L + N F+ I ++S CG + A ++F+
Sbjct: 43 FGFLRNAITSS-DLMLGKC--THARILTFEENPERFLINNLISMYSKCGSLTYARRVFDK 99
Query: 212 GDAWEVVTWNVMLSGYNR-----VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLT 266
++V+WN +L+ Y + V V + +TL +L C
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 267 DLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVS 326
+ + Y + ++ + + L++++ G++ K +F+ M RDV+ W ++
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 327 GFANTG----QIDLARKYFDQ--MPERDYVSWTAMIDG---------------------- 358
+ G IDL+ + P + A I G
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSE 279
Query: 359 ----------YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKT 408
YL + L F +M S V+ D+ T + +L + +L LG+ V
Sbjct: 280 IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC 339
Query: 409 YIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEE 468
K ++ + ++LI+MY K AR F M ++D W ++I G+A NG E
Sbjct: 340 MALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVE 399
Query: 469 ALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYG--- 525
A+ +F ++ + PD T VL A A + +G + + H IK N
Sbjct: 400 AVCLFMQLLRCGLKPDQYTMTSVLKA---ASSLPEGLSLSKQVHV-HAIKINNVSDSFVS 455
Query: 526 -CMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRV----HKNVELAEMAAKQ 578
++D SR +KEA IL + + W +++ HK ++L + KQ
Sbjct: 456 TALIDAYSRNRCMKEA--EILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 208/436 (47%), Positives = 308/436 (70%), Gaps = 1/436 (0%)
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVK 381
S++ +AN G + A K FD+MPE+D V+W ++I+G+ EALAL+ EM +K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 382 PDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKT 441
PD FT+VS+L+ACA +GAL LG+ V Y+ K + + + L+D+Y +CG VE+A+
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 442 FKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS-ITPDDITYIGVLSACTHAGM 500
F EM K+ WT++IVGLA+NG G+EA+ +F M + + P +IT++G+L AC+H GM
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 501 VEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
V++G ++F M ++ I+P + H+GCMVDLL+RAG +K+A + I +MP++PN ++W +LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 561 GACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKK 620
GAC VH + +LAE A QI++LEP + YVLL N+YA+ +RW +++++R M+ G+KK
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 621 TPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEED 680
PG SL+E+ ++EF+ GD+SHPQS IYAKL+ M L + GY P S V++D+ EE+
Sbjct: 327 VPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Query: 681 KETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKT 740
KE A+ HSEK+AIA+ LIS+ I +VKNLR+C DCH KLVSK YNRE+VVRD++
Sbjct: 387 KENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRS 446
Query: 741 RFHHFRHGVCSCNNFW 756
RFHHF++G CSC ++W
Sbjct: 447 RFHHFKNGSCSCQDYW 462
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 36/321 (11%)
Query: 167 LKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG 226
++ G+ + ++ G S ++VQ + +HL++ CG V A+K+F+ ++V WN +++G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN 286
+ G+ P+ T+V +LSAC+K+ L G V+ Y+ + + N
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 287 LVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
L NVLLD++ CG ++ AK +FD M ++ +SWTS++ G A
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA----------------- 166
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSH-VKPDEFTMVSILTACAHLGALELG-E 404
++G+ +EA+ LF+ M+ + + P E T V IL AC+H G ++ G E
Sbjct: 167 ---------VNGF-----GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Query: 405 WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAIN 463
+ + ++ KI ++D+ + G V+KA + K M Q + IW ++ +
Sbjct: 213 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV- 271
Query: 464 GHGEEALTMFSNMIESSITPD 484
HG+ L F+ + + P+
Sbjct: 272 -HGDSDLAEFARIQILQLEPN 291
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 5/271 (1%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRI 129
IHS I+ G S N ++ GDV A +VFD +P + WN++I G++
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYAN--CGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 130 SCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQ 189
P+ +++Y M + IKPD FT LL AL GK + + +K+GL NL
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 190 KAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN-RVXXXXXXXXXXXXXXXXGV 248
+ L++ CG V+ A +F+ V+W ++ G G+
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 249 SPNSVTLVLILSACSKLTDLAGG-NYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
P +T V IL ACS + G Y + E +EP + ++D+ G++ A
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 247
Query: 308 GVFDNMKTR-DVISWTSIVSGFANTGQIDLA 337
+M + +V+ W +++ G DLA
Sbjct: 248 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 2/164 (1%)
Query: 397 LGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAM 456
+ + LGE + + + ++ + ++ ++L+ +Y CG+V A K F +M +KD W ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
I G A NG EEAL +++ M I PD T + +LSAC G + G++ M I+ G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVG 119
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
+ N+ ++DL +R G ++EA + M V NS+ W SL+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/594 (37%), Positives = 353/594 (59%), Gaps = 10/594 (1%)
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLV--DLAHKIFNMGDAWEVVTWNVMLSGYN 228
K + H ++ GLD + ++ I + G+ A ++ W ++ GY
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGN--YVYQYLTEGIVEPN 286
++P S T +L AC + DL G + + G
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFC--F 183
Query: 287 LVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
+ + N ++DM+ C +D A+ VFD M RDVISWT +++ +A G ++ A + F+ +P
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
+D V+WTAM+ G+ + +EAL F M+ S ++ DE T+ ++ACA LGA + +
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 407 KTYIDKN--KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAING 464
K+ ++ IGSALIDMY KCGNVE+A F M+ K+ F +++MI+GLA +G
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHG 363
Query: 465 HGEEALTMFSNMI-ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTH 523
+EAL +F M+ ++ I P+ +T++G L AC+H+G+V++GR+ F SM G++P H
Sbjct: 364 RAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH 423
Query: 524 YGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELE 583
Y CMVDLL R G L+EAL++I M V+P+ VWG+LLGACR+H N E+AE+AA+ + ELE
Sbjct: 424 YTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELE 483
Query: 584 PENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCS-LMEMNGIIYEFVAGDQS 642
P+ Y+LL N+YA+ W + VR ++ E+G+KKTP S +++ NG +++F G+ +
Sbjct: 484 PDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLN 543
Query: 643 HPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSG 702
HP S +I KLE +++ LT GY PD S V D+ + K L +H+EKLA+A++L+++
Sbjct: 544 HPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTN 603
Query: 703 PGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
TI I+KNLRMC+DCH+ +L S+ + +++RD RFHHFR G CSC +FW
Sbjct: 604 RDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 196/484 (40%), Gaps = 74/484 (15%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
IS L+ C + Q+KQIH ++ GL K+I YAR+V + +
Sbjct: 53 ISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFR 112
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLL 174
+ F+W +I+GY+ I+MY M I P SFTF LLK L G+
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRV---- 230
+L ++V I ++ C +D A K+F+ +V++W +++ Y RV
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 231 ---------------------------XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
G+ + VT+ +SAC+
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 264 KLTDLAGGNYVYQYLTEGIVEPN--LVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISW 321
+L + Q + P+ +V+ + L+DM+ CG ++ A VF +M ++V ++
Sbjct: 293 QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM-QMSHV 380
+S++ G A G+ +EAL LF M + +
Sbjct: 353 SSMILGLATHGRA-------------------------------QEALHLFHYMVTQTEI 381
Query: 381 KPDEFTMVSILTACAHLGALELGEWVKTYIDKN---KINNDTFIGSALIDMYFKCGNVEK 437
KP+ T V L AC+H G ++ G V + + + D + + ++D+ + G +++
Sbjct: 382 KPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY--TCMVDLLGRTGRLQE 439
Query: 438 ARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI-TYIGVLSAC 495
A + K M + +W A++ I+ + E A ++ E + PD I YI + +
Sbjct: 440 ALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFE--LEPDIIGNYILLSNVY 497
Query: 496 THAG 499
AG
Sbjct: 498 ASAG 501
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/511 (41%), Positives = 328/511 (64%), Gaps = 6/511 (1%)
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
++PN T +L +CS G ++ ++ + + + + L+D++ G++ +A+
Sbjct: 126 INPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQ 181
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
VFD M R ++S T++++ +A G ++ AR FD M ERD VSW MIDGY + +
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241
Query: 368 ALALFREM-QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
AL LF+++ KPDE T+V+ L+AC+ +GALE G W+ ++ ++I + + + LI
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLI 301
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE-SSITPDD 485
DMY KCG++E+A F + +KD W AMI G A++G+ ++AL +F+ M + + P D
Sbjct: 302 DMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTD 361
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
IT+IG L AC HAG+V +G + F SM ++GIKP + HYGC+V LL RAG LK A + I
Sbjct: 362 ITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIK 421
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
NM + +S++W S+LG+C++H + L + A+ +I L +N +YVLL NIYA+ +E
Sbjct: 422 NMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEG 481
Query: 606 LREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGY 665
+ +VR +M E+GI K PG S +E+ ++EF AGD+ H +SKEIY L + + + + GY
Sbjct: 482 VAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGY 541
Query: 666 SPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKL 725
P+T+ V D+ E +KE +L HSE+LAIAY LIS+ PG ++I KNLR+C DCH + KL
Sbjct: 542 VPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKL 601
Query: 726 VSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+SK R++V+RD+ RFHHF G CSC +FW
Sbjct: 602 ISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 196/448 (43%), Gaps = 79/448 (17%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQES-GDVDYARQVFDTIPHPS 115
L+++ +S ++ QIH+ ++ L P + + S G + ++ +F P
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLD 175
+F++ I S +Y+ +L+ I P+ FTF LLK + K GK++
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHT 150
Query: 176 HAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN-------------------MGDA-- 214
H +K GL + +V + +++ G V A K+F+ G+
Sbjct: 151 HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA 210
Query: 215 ----------WEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG-VSPNSVTLVLILSACS 263
++V+WNVM+ GY + G P+ +T+V LSACS
Sbjct: 211 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 270
Query: 264 KLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTS 323
++ L G +++ ++ + N+ + L+DM+ CG ++ A VF++ +D+++W +
Sbjct: 271 QIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 330
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ-MSHVKP 382
+++G+A G + ++AL LF EMQ ++ ++P
Sbjct: 331 MIAGYAMHG-------------------------------YSQDALRLFNEMQGITGLQP 359
Query: 383 DEFTMVSILTACAHLGALELGEWV-----KTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
+ T + L ACAH G + G + + Y K KI + L+ + + G +++
Sbjct: 360 TDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY----GCLVSLLGRAGQLKR 415
Query: 438 ARKTFKEMH-QKDKFIWTAMIVGLAING 464
A +T K M+ D +W++++ ++G
Sbjct: 416 AYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 53/370 (14%)
Query: 327 GFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
+A+ G+I + F Q + D +TA I+ +A L+ ++ S + P+EFT
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 387 MVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFK--------------- 431
S+L +C + + G+ + T++ K + D ++ + L+D+Y K
Sbjct: 133 FSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 432 ------------C----GNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSN 475
C GNVE AR F M ++D W MI G A +G +AL +F
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 476 MI-ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRA 534
++ E PD+IT + LSAC+ G +E GR + I+ NV ++D+ S+
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGR-WIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 535 GHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA-----EMAAKQIIELEPENGSV 589
G L+EA+ V + P K + + W +++ +H + A EM + I L+P + +
Sbjct: 308 GSLEEAVLVFNDTPRK-DIVAWNAMIAGYAMHGYSQDALRLFNEM--QGITGLQPTDITF 364
Query: 590 YVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEI 649
L A E +R ++ E GIK +E G + + Q K
Sbjct: 365 IGTLQACAHAGLVNEGIRIFESMGQEYGIKPK-----IEHYGCLVSLLG---RAGQLKRA 416
Query: 650 YAKLENMMQD 659
Y ++NM D
Sbjct: 417 YETIKNMNMD 426
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 133/317 (41%), Gaps = 36/317 (11%)
Query: 42 SSHCDPHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVF----------GNKVIA 91
SS +P+ F T SLL+ C ST K IH+ +K GL DP G V++
Sbjct: 123 SSEINPNEF--TFSSLLKSC-STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVS 179
Query: 92 -------------------FCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCP 132
C + G+V+ AR +FD++ + WN MI GY++ P
Sbjct: 180 AQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFP 239
Query: 133 KSGISMYLLMLAH-NIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKA 191
+ ++ +LA KPD T L + AL+ G+ + + N+ V
Sbjct: 240 NDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTG 299
Query: 192 FIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN-RVXXXXXXXXXXXXXXXXGVSP 250
I ++S CG ++ A +FN ++V WN M++GY G+ P
Sbjct: 300 LIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQP 359
Query: 251 NSVTLVLILSACSKLTDLAGGNYVYQYL-TEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
+T + L AC+ + G +++ + E ++P + L+ + G G++ A
Sbjct: 360 TDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYET 419
Query: 310 FDNMK-TRDVISWTSIV 325
NM D + W+S++
Sbjct: 420 IKNMNMDADSVLWSSVL 436
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/733 (32%), Positives = 383/733 (52%), Gaps = 79/733 (10%)
Query: 71 HSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRIS 130
H+ ++ G S+ GN ++A S + AR+VFD + V WN++I+ Y+++
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRS--LSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 131 CPKSGISMYLLMLAH-NIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQ 189
PK + M+ M +PD+ T +L + GK L AV + N+FV
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 190 KAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXX----- 244
+ +++ CG++D A+ +F+ +VV+WN M++GY+++
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 245 ------------------------------XXGVSPNSVTLVLILSACSKLTDLAGGNYV 274
G+ PN VTL+ +LS C+ + L G +
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 275 YQYLTE--------GIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVS 326
+ Y + G + N+V+ N L+DM+ C ++D A+ +FD++ +
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVI-NQLIDMYAKCKKVDTARAMFDSLSPK---------- 436
Query: 327 GFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM--QMSHVKPDE 384
ERD V+WT MI GY + +AL L EM + +P+
Sbjct: 437 -------------------ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 385 FTMVSILTACAHLGALELGEWVKTYIDKNKINN-DTFIGSALIDMYFKCGNVEKARKTFK 443
FT+ L ACA L AL +G+ + Y +N+ N F+ + LIDMY KCG++ AR F
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 444 EMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEK 503
M K++ WT+++ G ++G+GEEAL +F M D +T + VL AC+H+GM+++
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 504 GRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGAC 563
G ++F M G+ P HY C+VDLL RAG L AL +I MP++P +VW + L C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
Query: 564 RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPG 623
R+H VEL E AA++I EL + Y LL N+YA RW+++ +R++M +G+KK PG
Sbjct: 658 RIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717
Query: 624 CSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKET 683
CS +E F GD++HP +KEIY L + MQ + + GY P+T D+ +E+K+
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDD 777
Query: 684 ALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFH 743
LF HSEKLA+AY ++++ G IRI KNLR+C DCH +S+ + ++++RD +RFH
Sbjct: 778 LLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFH 837
Query: 744 HFRHGVCSCNNFW 756
HF++G CSC +W
Sbjct: 838 HFKNGSCSCKGYW 850
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 274/542 (50%), Gaps = 28/542 (5%)
Query: 52 ETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTI 111
E + +CK+ Q+K IH K + G+ + + + + + G + +A +
Sbjct: 29 EITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISV---GCLSHAVSLLRRF 85
Query: 112 PHPS---VFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALK 168
P PS V+ WN++I+ Y C + ++ LM + + PD++TFPF+ K +++
Sbjct: 86 P-PSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVR 144
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
G+ ++ G SN+FV A + ++S C + A K+F+ W+VV+WN ++ Y
Sbjct: 145 CGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYA 204
Query: 229 RVXXXXXXXXXXXXXXXX-GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
++ G P+++TLV +L C+ L + G ++ + + N+
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER 347
+ N L+DM+ CG MD A VF NM +DV+SW ++V+G++ G+ + A + F++M E
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 348 ----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG 403
D V+W+A I GY + EAL + R+M S +KP+E T++S+L+ CA +GAL G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 404 EWVKTY-------IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFI--WT 454
+ + Y + KN ++ + + LIDMY KC V+ AR F + K++ + WT
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 455 AMIVGLAINGHGEEALTMFSNMIES--SITPDDITYIGVLSACTHAGMVEKGRKF--FAS 510
MI G + +G +AL + S M E P+ T L AC + G++ +A
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 511 MTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVE 570
Q+ + V++ C++D+ ++ G + +A V NM K N + W SL+ +H E
Sbjct: 505 RNQQNAVPLFVSN--CLIDMYAKCGSISDARLVFDNMMAK-NEVTWTSLMTGYGMHGYGE 561
Query: 571 LA 572
A
Sbjct: 562 EA 563
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/640 (37%), Positives = 360/640 (56%), Gaps = 39/640 (6%)
Query: 119 WNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAV 178
WN ++ + S IS+Y ML PD+F+FPF+LK + G+ L H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 179 KLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF--NMGDAWEVVTWNVMLSGYNRVXXXXXX 236
K G ++ FV A I ++ CGLV A K+F N + V +N ++SGY
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 237 XXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDM 296
GVS +SVT++ ++ C+ V +YL G +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT----------VPEYLWLG------------RSL 178
Query: 297 FGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMI 356
G C KG D+ +V S ++ + G ++ R+ FD+MP + ++W A+I
Sbjct: 179 HGQC-----VKGGLDS----EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 357 DGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN 416
GY + + L L+ +M+ S V PD FT+VS+L++CAHLGA ++G V ++ N
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM 476
+ F+ +A I MY +CGN+ KAR F M K WTAMI ++G GE L +F +M
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 477 IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
I+ I PD ++ VLSAC+H+G+ +KG + F +M ++ ++P HY C+VDLL RAG
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409
Query: 537 LKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNI 596
L EA++ I +MPV+P+ VWG+LLGAC++HKNV++AE+A ++IE EP N YVL+ NI
Sbjct: 410 LDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNI 469
Query: 597 YAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENM 656
Y+ K E + +R +M ER +K PG S +E G ++ F+AGD+SH Q++E++ L+ +
Sbjct: 470 YSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Query: 657 MQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMC 716
+ + D D GEE T HSE+LAIA+ +++S PG I ++KNLR+C
Sbjct: 530 ETSVMELAGNMDC-----DRGEEVSSTTR-EHSERLAIAFGILNSIPGTEILVIKNLRVC 583
Query: 717 VDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
DCH K VSK +R+ VVRD +RFH+F+ GVCSC ++W
Sbjct: 584 EDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 6/282 (2%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+ +H + +K GL S+ N I + G V+ R++FD +P + WN +I GYS
Sbjct: 176 RSLHGQCVKGGLDSEVAVLNSFITM--YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYS 233
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ + +Y M + + PD FT +L + A K G + G N+F
Sbjct: 234 QNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVF 293
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V A I +++ CG + A +F++ +V+W M+ Y G
Sbjct: 294 VSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG 353
Query: 248 VSPNSVTLVLILSACSK--LTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
+ P+ V++LSACS LTD G E +EP + L+D+ G G +D
Sbjct: 354 IRPDGAVFVMVLSACSHSGLTD-KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDE 412
Query: 306 AKGVFDNMKTR-DVISWTSIVSGFANTGQIDLARKYFDQMPE 346
A ++M D W +++ +D+A F ++ E
Sbjct: 413 AMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 454
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/594 (38%), Positives = 331/594 (55%), Gaps = 42/594 (7%)
Query: 205 AHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK 264
A K+F+ V+ NVM+ Y V P+ T +L ACS
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152
Query: 265 LTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSI 324
+ G ++ T+ + L + N L+ M+G CG + A+ V D M RDV+SW S+
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 325 VSGFANTGQIDLA-------------------------------------RKYFDQMPER 347
V G+A + D A + F +M ++
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 272
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
VSW MI Y++ EA+ L+ M+ +PD ++ S+L AC AL LG+ +
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGE 467
YI++ K+ + + +ALIDMY KCG +EKAR F+ M +D WTAMI +G G
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC 392
Query: 468 EALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCM 527
+A+ +FS + +S + PD I ++ L+AC+HAG++E+GR F MT + I P + H CM
Sbjct: 393 DAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACM 452
Query: 528 VDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENG 587
VDLL RAG +KEA I +M ++PN VWG+LLGACRVH + ++ +AA ++ +L PE
Sbjct: 453 VDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS 512
Query: 588 SVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSK 647
YVLL NIYA RWE + +R IM +G+KK PG S +E+N II+ F+ GD+SHPQS
Sbjct: 513 GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSD 572
Query: 648 EIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISS-----G 702
EIY +L+ +++ + GY PD+ D+ EEDKET L HSEKLAI +AL+++
Sbjct: 573 EIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEED 632
Query: 703 PGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
TIRI KNLR+C DCH AKL+S+ +RE+++RD RFH FR GVCSC ++W
Sbjct: 633 SNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 204/466 (43%), Gaps = 43/466 (9%)
Query: 67 LKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
L+ +HS+ I L + G K++ + + DV AR+VFD IP +V I N MI+ Y
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLK--DVASARKVFDEIPERNVIIINVMIRSY 115
Query: 127 SRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNL 186
G+ ++ M N++PD +TFP +LK + + G+ + A K+GL S L
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX 246
FV + ++ CG + A + + +VV+WN ++ GY +
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 247 GVSPNSVTLVLILSACSKLT----------------------DLAGGNY----------- 273
+S ++ T+ +L A S T ++ G Y
Sbjct: 236 KISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVE 295
Query: 274 VYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVIS----WTSIVSGFA 329
+Y + EP+ V +L G + K + ++ + +I +++ +A
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 355
Query: 330 NTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVS 389
G ++ AR F+ M RD VSWTAMI Y +A+ALF ++Q S + PD V+
Sbjct: 356 KCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVT 415
Query: 390 ILTACAHLGALELGE-WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH-Q 447
L AC+H G LE G K D KI + ++D+ + G V++A + ++M +
Sbjct: 416 TLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME 475
Query: 448 KDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLS 493
++ +W A++ ++ + L + + + P+ Y +LS
Sbjct: 476 PNERVWGALLGACRVHSDTDIGLLAADKLFQ--LAPEQSGYYVLLS 519
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 25/308 (8%)
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
++ +A+ + ARK FD++PER+ + MI Y+ + E + +F M +V+PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 384 EFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK 443
+T +L AC+ G + +G + K +++ F+G+ L+ MY KCG + +AR
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 444 EMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEK 503
EM ++D W +++VG A N ++AL + M I+ D T +L A ++ +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTE 257
Query: 504 GRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPV---KPNSIVWGSLL 560
+ M + G K ++ + M+ + + EA+++ M +P+++ S+L
Sbjct: 258 NVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 561 GAC----------RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVR 610
AC ++H +E K I L EN L ++YA C E R+V
Sbjct: 317 PACGDTSALSLGKKIHGYIE----RKKLIPNLLLENA-----LIDMYAKCGCLEKARDVF 367
Query: 611 TIMMERGI 618
M R +
Sbjct: 368 ENMKSRDV 375
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/691 (35%), Positives = 375/691 (54%), Gaps = 40/691 (5%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
Q+H+ +K GL N +I + G+V AR +FD SV WN+MI GY+
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYL--KCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 129 ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFV 188
+ M+ M + ++ +F ++K N L++ + L VK G + +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 189 QKAFIHLFSLCGLVDLAHKIFN-MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+ A + +S C + A ++F +G VV+W M+SG+ + G
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
V PN T +IL+A ++ + V+ + + E + + LLD + G+++ A
Sbjct: 393 VRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
VF + +D+++W+++++G+A TG+ +
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETE-------------------------------A 477
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGA-LELGEWVKTYIDKNKINNDTFIGSALI 426
A+ +F E+ +KP+EFT SIL CA A + G+ + K+++++ + SAL+
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALL 537
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
MY K GN+E A + FK +KD W +MI G A +G +AL +F M + + D +
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 597
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
T+IGV +ACTHAG+VE+G K+F M I P H CMVDL SRAG L++A+ VI N
Sbjct: 598 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 657
Query: 547 MPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENL 606
MP S +W ++L ACRVHK EL +AA++II ++PE+ + YVLL N+YA W+
Sbjct: 658 MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQER 717
Query: 607 REVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYS 666
+VR +M ER +KK PG S +E+ Y F+AGD+SHP +IY KLE++ L + GY
Sbjct: 718 AKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYE 777
Query: 667 PDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLV 726
PDTS V DI +E KE L +HSE+LAIA+ LI++ G + I+KNLR+C DCH + KL+
Sbjct: 778 PDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLI 837
Query: 727 SKAYNRELVVRDKTRFHHFRH-GVCSCNNFW 756
+K RE+VVRD RFHHF GVCSC +FW
Sbjct: 838 AKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/573 (20%), Positives = 227/573 (39%), Gaps = 88/573 (15%)
Query: 104 ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN 163
A +FD P + +++ G+SR + ++L + ++ D F +LK
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 164 DMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVM 223
+G+ L +K G ++ V + + + K+F+ VVTW +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 224 LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIV 283
+SGY R G PNS T L ++ G V+ + + +
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA------ 337
+ + + N L++++ CG + A+ +FD + + V++W S++SG+A G +DL
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG-LDLEALGMFY 284
Query: 338 --RKYFDQMPERDYVS--------------------------------WTAMIDGYLRMN 363
R + ++ E + S TA++ Y +
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 364 HFREALALFR--------------------------------EMQMSHVKPDEFTMVSIL 391
+AL LF+ EM+ V+P+EFT IL
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 392 TACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKF 451
TA + E V + K + +G+AL+D Y K G VE+A K F + KD
Sbjct: 405 TALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 460
Query: 452 IWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASM 511
W+AM+ G A G E A+ MF + + I P++ T+ +L+ C K F
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 520
Query: 512 TIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH----K 567
I+ + ++ ++ + ++ G+++ A +V K + + W S++ H K
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQAMK 579
Query: 568 NVELAEMAAKQIIELEPENGSVYVLLCNIYAAC 600
+++ + K+ ++++ V ++AAC
Sbjct: 580 ALDVFKEMKKRKVKMDG------VTFIGVFAAC 606
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 189/444 (42%), Gaps = 44/444 (9%)
Query: 56 SLLERCKSTYQLK---QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
S+++ C + +L+ Q+H +K G D ++ ++ + +D R +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV-AYSKCTAMLDALRLFKEIGC 358
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
+V W MI G+ + + + ++ M ++P+ FT+ +L + +
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSE 414
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
+ VK + + V A + + G V+ A K+F+ D ++V W+ ML+GY +
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAG-GNYVYQYLTEGIVEPNLVMEN 291
G+ PN T IL+ C+ G G + + + ++ +L + +
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
LL M+ G +++A+ VF + +D++SW S++SG+A GQ
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQ------------------ 576
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGE-WVKTYI 410
AM +AL +F+EM+ VK D T + + AC H G +E GE + +
Sbjct: 577 --AM-----------KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 411 DKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGEEA 469
KI S ++D+Y + G +EKA K + M + IW ++ ++ E
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG 683
Query: 470 LTMFSNMIESSITPDDITYIGVLS 493
+I ++ P+D +LS
Sbjct: 684 RLAAEKII--AMKPEDSAAYVLLS 705
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 135/323 (41%), Gaps = 38/323 (11%)
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
DV TS+V + RK FD+M ER+ V+WT +I GY R + E L LF MQ
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
+P+ FT + L A G G V T + KN ++ + ++LI++Y KCGNV
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 246
Query: 437 KARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACT 496
KAR F + K W +MI G A NG EAL MF +M + + + ++ V+ C
Sbjct: 247 KARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCA 306
Query: 497 -----------HAGMVEKGRKFFASMTI--------------------QHGIKPNVTHYG 525
H +V+ G F ++ + G NV +
Sbjct: 307 NLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWT 366
Query: 526 CMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLLGACRVHKNVELAEMAAKQIIEL 582
M+ + +EA+D+ M V+PN + +L A V E+ K E
Sbjct: 367 AMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER 426
Query: 583 EPENGS----VYVLLCNIYAACK 601
G+ YV L + A K
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAK 449
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 327 GFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
G ++ ++ A FD+ P RD S+ +++ G+ R +EA LF + ++ D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 387 MVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH 446
S+L A L G + K +D +G++L+D Y K N + RK F EM
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 447 QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRK 506
+++ WT +I G A N +E LT+F M P+ T+ L G+ +G +
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 507 FFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
++ +++G+ + +++L + G++++A + VK + + W S++
Sbjct: 216 VH-TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMI 267
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/668 (36%), Positives = 369/668 (55%), Gaps = 61/668 (9%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
++G++D AR+VFD +P +V W ++KGY S++ M N ++
Sbjct: 91 KNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN----KVSWTV 146
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLG---LDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGD 213
+L GF D G++ D A KL D + + + IH G VD A +IF+
Sbjct: 147 MLIGFLQD-----GRI--DDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 214 AWEVVTWNVMLSGY---NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAG 270
V+TW M++GY NRV I + T+++
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARK----------------------IFDVMPEKTEVSW 237
Query: 271 GNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFAN 330
+ + Y+ G +E A+ +F+ M + VI+ +++SG
Sbjct: 238 TSMLMGYVQNGRIED--------------------AEELFEVMPVKPVIACNAMISGLGQ 277
Query: 331 TGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSI 390
G+I AR+ FD M ER+ SW +I + R EAL LF MQ V+P T++SI
Sbjct: 278 KGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISI 337
Query: 391 LTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDK 450
L+ CA L +L G+ V + + + + D ++ S L+ MY KCG + K++ F KD
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 451 FIWTAMIVGLAINGHGEEALTMFSNM-IESSITPDDITYIGVLSACTHAGMVEKGRKFFA 509
+W ++I G A +G GEEAL +F M + S P+++T++ LSAC++AGMVE+G K +
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 510 SMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNV 569
SM G+KP HY CMVD+L RAG EA+++I +M V+P++ VWGSLLGACR H +
Sbjct: 458 SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQL 517
Query: 570 ELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEM 629
++AE AK++IE+EPEN Y+LL N+YA+ RW ++ E+R +M R ++K+PGCS E+
Sbjct: 518 DVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEV 577
Query: 630 NGIIYEFVAGD-QSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRH 688
++ F G SHP+ + I L+ + L AGY+PD S D+ EE+K +L H
Sbjct: 578 ENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYH 637
Query: 689 SEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHG 748
SE+LA+AYAL+ G+ IR++KNLR+C DCH K++SK RE+++RD RFHHFR+G
Sbjct: 638 SERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNG 697
Query: 749 VCSCNNFW 756
CSC ++W
Sbjct: 698 ECSCKDYW 705
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 176/410 (42%), Gaps = 62/410 (15%)
Query: 196 FSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTL 255
S G + A K+F+ D+ + +WN M++GY + P
Sbjct: 27 LSRIGKIHEARKLFDSCDSKSISSWNSMVAGY-----------------FANLMPRDA-- 67
Query: 256 VLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKT 315
+ L + + + N++ N L+ + GE+D A+ VFD M
Sbjct: 68 --------------------RKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPE 107
Query: 316 RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM 375
R+V+SWT++V G+ + G++D+A F +MPE++ VSWT M+ G+L+ +A L+ +
Sbjct: 108 RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI 167
Query: 376 QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNV 435
D S++ G ++ + + + + + ++ Y + V
Sbjct: 168 P----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRV 219
Query: 436 EKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSAC 495
+ ARK F M +K + WT+M++G NG E+A +F M + I ++S
Sbjct: 220 DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV----IACNAMISGL 275
Query: 496 THAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPN 552
G + K R+ F SM + N + ++ + R G EALD+ + M V+P
Sbjct: 276 GQKGEIAKARRVFDSMK-----ERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 553 SIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYV--LLCNIYAAC 600
S+L C ++ + Q++ + + VYV +L +Y C
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQF-DVDVYVASVLMTMYIKC 379
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 25/271 (9%)
Query: 325 VSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
++ + G+I ARK FD + SW +M+ GY R+A LF EM PD
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDR 77
Query: 385 FTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE 444
+ ++ E+ E K + + N ++ +AL+ Y G V+ A F +
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSW--TALVKGYVHNGKVDVAESLFWK 135
Query: 445 MHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG 504
M +K+K WT M++G +G ++A ++ + + D+I ++ G V++
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEA 191
Query: 505 RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACR 564
R+ F M+ + +V + MV + + +A + MP K + W S+L
Sbjct: 192 REIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK-TEVSWTSMLMGYV 245
Query: 565 VHKNVELAEMAAKQIIELEPENGSVYVLLCN 595
+ +E AE ++ E+ P V+ CN
Sbjct: 246 QNGRIEDAE----ELFEVMPVKP---VIACN 269
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/703 (32%), Positives = 386/703 (54%), Gaps = 48/703 (6%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
KQ+H+ ++ G + + V + + G + ++ + + + WNT++
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMY---GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLG-LDSNL 186
+ + M+ ++PD FT +L ++ L+ GK L +A+K G LD N
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR-VXXXXXXXXXXXXXXX 245
FV A + ++ C V ++F+ ++ WN M++GY++
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
G+ NS T+ ++ AC + + ++ ++ + ++ + ++N L+DM+
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY-------- 450
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
+ G+ID+A + F +M +RD V+W MI GY+ H
Sbjct: 451 -----------------------SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 366 REALALFREMQ-----------MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNK 414
+AL L +MQ +KP+ T+++IL +CA L AL G+ + Y KN
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547
Query: 415 INNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFS 474
+ D +GSAL+DMY KCG ++ +RK F ++ QK+ W +I+ ++G+G+EA+ +
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 475 NMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRA 534
M+ + P+++T+I V +AC+H+GMV++G + F M +G++P+ HY C+VDLL RA
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 667
Query: 535 GHLKEALDVILNMPVKPNSI-VWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLL 593
G +KEA ++ MP N W SLLGA R+H N+E+ E+AA+ +I+LEP S YVLL
Sbjct: 668 GRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLL 727
Query: 594 CNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKL 653
NIY++ W+ EVR M E+G++K PGCS +E +++FVAGD SHPQS+++ L
Sbjct: 728 ANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYL 787
Query: 654 ENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNL 713
E + + + GY PDTS V ++ E++KE L HSEKLAIA+ ++++ PG IR+ KNL
Sbjct: 788 ETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNL 847
Query: 714 RMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
R+C DCH K +SK +RE+++RD RFH F++G CSC ++W
Sbjct: 848 RVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 218/463 (47%), Gaps = 52/463 (11%)
Query: 114 PSVFI--------WNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDM 165
PS+FI W +++ R + + + Y+ M+ IKPD++ FP LLK +
Sbjct: 52 PSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQ 111
Query: 166 ALKYGKVLLDHAVKL--GLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVM 223
++ GK + H K G+DS + V ++L+ CG +K+F+ V+WN +
Sbjct: 112 DMELGKQIHAHVYKFGYGVDS-VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSL 170
Query: 224 LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAG---GNYVYQY-LT 279
+S V P+S TLV +++ACS L G G V+ Y L
Sbjct: 171 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 280 EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARK 339
+G E N + N L+ M+G G++ ++K + + RD+++W +++S Q+
Sbjct: 231 KG--ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL----- 283
Query: 340 YFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGA 399
EAL REM + V+PDEFT+ S+L AC+HL
Sbjct: 284 --------------------------LEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 400 LELGEWVKTYIDKN-KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIV 458
L G+ + Y KN ++ ++F+GSAL+DMY C V R+ F M + +W AMI
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 459 GLAINGHGEEALTMFSNMIESS-ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
G + N H +EAL +F M ES+ + + T GV+ AC +G + ++ ++ G+
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGL 436
Query: 518 KPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
+ ++D+ SR G + A+ + M + + + W +++
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 167/369 (45%), Gaps = 32/369 (8%)
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
W ++ +R N REA+ + +M + +KPD + ++L A A L +ELG+ + ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 412 KNKINNDTF-IGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEAL 470
K D+ + + L+++Y KCG+ K F + ++++ W ++I L E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 471 TMFSNMIESSITPDDITYIGVLSACTHAGMVEK---GRKFFASMTIQHGIKP---NVTHY 524
F M++ ++ P T + V++AC++ M E G++ A +G++ N
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA-----YGLRKGELNSFII 239
Query: 525 GCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA-CRVHKNVELAEMAAKQIIE-L 582
+V + + G L + V+L + + W ++L + C+ + +E E + ++E +
Sbjct: 240 NTLVAMYGKLGKLASS-KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 583 EPENGSVYVLLCNIYAACKRWENLR---EVRTIMMERGI---KKTPGCSLMEMNGIIYEF 636
EP+ ++ ++ AC E LR E+ ++ G G +L++M +
Sbjct: 299 EPDEFTI----SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 637 VAGDQSHPQSKEIYAKLENMMQDLTNAGYSP---DTSEVFLDIGEEDKETALFRHSEKLA 693
++G + + L N M AGYS D + L IG E+ L +
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMI----AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 694 IAYALISSG 702
+ A + SG
Sbjct: 411 VVPACVRSG 419
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/769 (32%), Positives = 396/769 (51%), Gaps = 79/769 (10%)
Query: 62 KSTYQL-KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP------ 114
+++ QL + +H I G N++I C +S +++YARQ+FD I P
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYC--KSSELNYARQLFDEISEPDKIART 84
Query: 115 ----------------SVF-----------IWNTMIKGYSRISCPKSGISMYLLMLAHNI 147
VF ++N MI G+S + S I+++ M
Sbjct: 85 TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 148 KPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKL--GLDSNLFVQKAFIHLFSLCG----L 201
KPD+FTF +L G +A + + HA L G V A + ++S C L
Sbjct: 145 KPDNFTFASVLAGLAL-VADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 202 VDLAHKIFN--------------------------------MGDAWEVVTWNVMLSGYNR 229
+ A K+F+ M D ++V +N M+SGY
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
G+ + T ++ AC+ L G V+ Y+ + +
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHF 322
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY 349
+N L+ ++ CG+ D A+ +F+ M +D++SW +++SG+ ++G I A+ F +M E++
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTY 409
+SW MI G E L LF M+ +P ++ + +CA LGA G+
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 410 IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEA 469
+ K ++ G+ALI MY KCG VE+AR+ F+ M D W A+I L +GHG EA
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVD 529
+ ++ M++ I PD IT + VL+AC+HAG+V++GRK+F SM + I P HY ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 530 LLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSV 589
LL R+G +A VI ++P KP + +W +LL CRVH N+EL +AA ++ L PE+
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 590 YVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEI 649
Y+LL N++AA +WE + VR +M +RG+KK CS +EM ++ F+ D SHP+++ +
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAV 682
Query: 650 YAKLENMMQDLTNAGYSPDTSEVFLDIGEED--KETALFRHSEKLAIAYALISSGPGVTI 707
Y L+++ +++ GY PDTS V D+ E D KE L HSEK+A+A+ L+ PG TI
Sbjct: 683 YIYLQDLGKEMRRLGYVPDTSFVLHDV-ESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTI 741
Query: 708 RIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
RI KNLR C DCH + +S R++++RD+ RFHHFR+G CSC NFW
Sbjct: 742 RIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 131/306 (42%), Gaps = 14/306 (4%)
Query: 50 FGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
F + +SL +C + + I K + D V N +++ + SG + A+ +F
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMP----AKDLVSWNALLSGYVS--SGHIGEAKLIFK 375
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+ ++ W MI G + + G+ ++ M +P + F +K A
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
G+ +K+G DS+L A I +++ CG+V+ A ++F + V+WN +++ +
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK--LTDLAGGNYVYQYLTEGIVEPNL 287
G+ P+ +TL+ +L+ACS L D G Y T + P
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVD-QGRKYFDSMETVYRIPPGA 554
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDVIS-WTSIVSGFANTGQIDL----ARKYFD 342
L+D+ G+ A+ V +++ + W +++SG G ++L A K F
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFG 614
Query: 343 QMPERD 348
+PE D
Sbjct: 615 LIPEHD 620
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 438 bits (1126), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/703 (33%), Positives = 382/703 (54%), Gaps = 39/703 (5%)
Query: 56 SLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS 115
S+L+ C++ +IH +K G D +I ++ V AR +FD +P
Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA--VGNARILFDEMPVRD 215
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKP-DSFTFPFLLKGFTNDMALKYGKVLL 174
+ WN MI GY +SG + L L++ ++ DS T LL T G +
Sbjct: 216 MGSWNAMISGYC-----QSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXX 234
+++K GL+S LFV I L++ G + K+F+ ++++WN ++ Y
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 235 XXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLL 294
+ P+ +TL+ + S S+L D+ V +
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR-------------- 376
Query: 295 DMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTA 354
KG F D+ ++V +A G +D AR F+ +P D +SW
Sbjct: 377 ------------KGWF----LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420
Query: 355 MIDGYLRMNHFREALALFREMQM-SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 413
+I GY + EA+ ++ M+ + ++ T VS+L AC+ GAL G + + KN
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMF 473
+ D F+ ++L DMY KCG +E A F ++ + + W +I +GHGE+A+ +F
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 474 SNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSR 533
M++ + PD IT++ +LSAC+H+G+V++G+ F M +GI P++ HYGCMVD+ R
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 534 AGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLL 593
AG L+ AL I +M ++P++ +WG+LL ACRVH NV+L ++A++ + E+EPE+ +VLL
Sbjct: 601 AGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 660
Query: 594 CNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKL 653
N+YA+ +WE + E+R+I +G++KTPG S ME++ + F G+Q+HP +E+Y +L
Sbjct: 661 SNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYREL 720
Query: 654 ENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNL 713
+ L GY PD V D+ +++KE L HSE+LAIA+ALI++ TIRI KNL
Sbjct: 721 TALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNL 780
Query: 714 RMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
R+C DCH + K +SK RE++VRD RFHHF++GVCSC ++W
Sbjct: 781 RVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 258/543 (47%), Gaps = 47/543 (8%)
Query: 56 SLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS 115
+L C + K +H++ + + K++ C G+V AR FD I +
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYL--GNVALARHTFDHIQNRD 116
Query: 116 VFIWNTMIKGYSRISCPKSGISMY-LLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLL 174
V+ WN MI GY R I + L ML+ + PD TFP +LK + G +
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIH 173
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXX 234
A+K G +++V + IHL+S V A +F+ ++ +WN M+SGY +
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 235 XXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLL 294
+ +SVT+V +LSAC++ D G ++ Y + +E L + N L+
Sbjct: 234 EALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 295 DMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTA 354
D++ G + + VFD M RD+ISW SI+ + ++ P R
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE-----------LNEQPLR------- 331
Query: 355 MIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTY-IDKN 413
A++LF+EM++S ++PD T++S+ + + LG + V+ + + K
Sbjct: 332 -------------AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMF 473
D IG+A++ MY K G V+ AR F + D W +I G A NG EA+ M+
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438
Query: 474 SNM-IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLS 532
+ M E I + T++ VL AC+ AG + +G K + +++G+ +V + D+
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL-LKNGLYLDVFVVTSLADMYG 497
Query: 533 RAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIE--LEPENGSVY 590
+ G L++AL + +P + NS+ W +L+ H + E A M K++++ ++P++ +
Sbjct: 498 KCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 591 VLL 593
LL
Sbjct: 557 TLL 559
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 197/448 (43%), Gaps = 42/448 (9%)
Query: 53 TPISLLERCKSTYQLKQ---IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
T +SLL C + IHS +IK GL S+ NK+I E G + ++VFD
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL--YAEFGRLRDCQKVFD 306
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+ + WN++IK Y P IS++ M I+PD T L + ++
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 366
Query: 170 GKVLLDHAVKLG-LDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
+ + ++ G ++ + A + +++ GLVD A +FN +V++WN ++SGY
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426
Query: 229 RVXXXXXXXXXXXXXXXXG-VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
+ G ++ N T V +L ACS+ L G ++ L + + ++
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER 347
+ L DM+G CG ++ A +F Q+P
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLF-------------------------------YQIPRV 515
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
+ V W +I + H +A+ LF+EM VKPD T V++L+AC+H G ++ G+W
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF 575
Query: 408 TYIDKN-KINNDTFIGSALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGH 465
+ + I ++DMY + G +E A K K M Q D IW A++ ++G+
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Query: 466 GEEALTMFSNMIESSITPDDITYIGVLS 493
+ ++ E + P+ + Y +LS
Sbjct: 636 VDLGKIASEHLFE--VEPEHVGYHVLLS 661
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 11/313 (3%)
Query: 43 SHCDPHCFGETPI-SLLERCKSTYQLKQIHSKTIKMG-LSSDPVFGNKVIAFCCTQESGD 100
S P C + S+L + + + T++ G D GN V+ + G
Sbjct: 342 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM--YAKLGL 399
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN-IKPDSFTFPFLLK 159
VD AR VF+ +P+ V WNT+I GY++ I MY +M I + T+ +L
Sbjct: 400 VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 459
Query: 160 GFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVT 219
+ AL+ G L +K GL ++FV + ++ CG ++ A +F V
Sbjct: 460 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP 519
Query: 220 WNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL- 278
WN +++ + GV P+ +T V +LSACS + G + ++ +
Sbjct: 520 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 579
Query: 279 TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTGQIDLA 337
T+ + P+L ++DM+G G+++ A +M + D W +++S G +DL
Sbjct: 580 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 639
Query: 338 R----KYFDQMPE 346
+ F+ PE
Sbjct: 640 KIASEHLFEVEPE 652
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/689 (33%), Positives = 362/689 (52%), Gaps = 32/689 (4%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
Q+H+ +K+G ++P + E +D A +F+ IP +NT+I GY +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 129 ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFV 188
I ++L M +P FTF +LK G+ L +V G + V
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 189 QKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGV 248
+ +S V +F+ + V++NV++S Y++ G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 249 SPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKG 308
+ +LS + L+ L G ++ + L + N L+DM+ C + A+
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 309 VFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREA 368
+F ++ P+R VSWTA+I GY++
Sbjct: 408 IFKSL-------------------------------PQRTTVSWTALISGYVQKGLHGAG 436
Query: 369 LALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDM 428
L LF +M+ S+++ D+ T ++L A A +L LG+ + +I ++ + F GS L+DM
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 429 YFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITY 488
Y KCG+++ A + F+EM ++ W A+I A NG GE A+ F+ MIES + PD ++
Sbjct: 497 YAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 489 IGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP 548
+GVL+AC+H G VE+G ++F +M+ +GI P HY CM+DLL R G EA ++ MP
Sbjct: 557 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 549 VKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEP-ENGSVYVLLCNIYAACKRWENLR 607
+P+ I+W S+L ACR+HKN LAE AA+++ +E + + YV + NIYAA WE +R
Sbjct: 617 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 676
Query: 608 EVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSP 667
+V+ M ERGIKK P S +E+N I+ F + DQ+HP EI K+ + ++ GY P
Sbjct: 677 DVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKP 736
Query: 668 DTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVS 727
DTS V D+ E+ K +L HSE+LA+A+ALIS+ G I ++KNLR C DCH KL+S
Sbjct: 737 DTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLIS 796
Query: 728 KAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
K RE+ VRD +RFHHF GVCSC ++W
Sbjct: 797 KIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 187/453 (41%), Gaps = 36/453 (7%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+Q+H+ ++ G S D GN+++ F + V R +FD +P +N +I YS
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDR--VLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ ++ + + M +F F +L N +L+ G+ L A+ DS L
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V + + +++ C + + A IF V+W ++SGY +
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
+ + T +L A + L G ++ ++ N+ + L+DM+ CG + A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
VF+ M R+ +SW +++S A+ G DG
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNG------------------------DG-------EA 536
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIGSALI 426
A+ F +M S ++PD +++ +LTAC+H G +E G E+ + I + ++
Sbjct: 537 AIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACML 596
Query: 427 DMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
D+ + G +A K EM + D+ +W++++ I+ + A + D
Sbjct: 597 DLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDA 656
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIK 518
Y+ + + AG EK R +M + GIK
Sbjct: 657 AAYVSMSNIYAAAGEWEKVRDVKKAMR-ERGIK 688
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 10/267 (3%)
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMP 345
N ++E++L G++ AA+ V+D M ++ +S +++SG TG + AR FD MP
Sbjct: 52 NFIVEDLLRR-----GQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 346 ERDYVSWTAMIDGYLRMNHFREALALFREM--QMSHVKPDEFTMVSILTACAHLGALELG 403
+R V+WT ++ Y R +HF EA LFR+M S PD T ++L C
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV 166
Query: 404 EWVKTYIDKNKINNDTF--IGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLA 461
V + K + + F + + L+ Y + ++ A F+E+ +KD + +I G
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 462 INGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNV 521
+G E++ +F M +S P D T+ GVL A G++ A +++ G +
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA-LSVTTGFSRDA 285
Query: 522 THYGCMVDLLSRAGHLKEALDVILNMP 548
+ ++D S+ + E + MP
Sbjct: 286 SVGNQILDFYSKHDRVLETRMLFDEMP 312
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 10/336 (2%)
Query: 53 TPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
T +S+ S +Q+H + + S GN ++ E + A +F ++P
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM--FEEAELIFKSLP 413
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
+ W +I GY + +G+ ++ M N++ D TF +LK + +L GK
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQ 473
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
L ++ G N+F + +++ CG + A ++F V+WN ++S +
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE--GIVEPNLVME 290
G+ P+SV+++ +L+ACS + G +Q ++ GI P
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT-PKKKHY 592
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTGQIDL----ARKYFDQMP 345
+LD+ G G A+ + D M D I W+S+++ L A K F
Sbjct: 593 ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652
Query: 346 ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVK 381
RD ++ +M + Y + + + + M+ +K
Sbjct: 653 LRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/590 (38%), Positives = 344/590 (58%), Gaps = 49/590 (8%)
Query: 184 SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG-YNRVXXXXXXXXXXXX 242
+ LF+ + L S V+ A ++F+ + WN ++ + V
Sbjct: 81 ATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRK 140
Query: 243 XXXXG-VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACG 301
G SP+ T +L AC+ + + G V+ + + ++ + N L+ ++G+CG
Sbjct: 141 MLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 200
Query: 302 EMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLR 361
+DLARK FD+MPER VSW +MID +R
Sbjct: 201 -------------------------------CLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 362 MNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN---KINND 418
+ AL LFREMQ S +PD +TM S+L+ACA LG+L LG W ++ + + D
Sbjct: 230 FGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
+ ++LI+MY KCG++ A + F+ M ++D W AMI+G A +G EEA+ F M++
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 479 --SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
++ P+ +T++G+L AC H G V KGR++F M + I+P + HYGC+VDL++RAG+
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGY 408
Query: 537 LKEALDVILNMPVKPNSIVWGSLLGA-CRVHKNVELAEMAAKQIIELEPENGS------- 588
+ EA+D++++MP+KP++++W SLL A C+ +VEL+E A+ II + +N S
Sbjct: 409 ITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSG 468
Query: 589 VYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKE 648
YVLL +YA+ RW ++ VR +M E GI+K PGCS +E+NGI +EF AGD SHPQ+K+
Sbjct: 469 AYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQ 528
Query: 649 IYAKLENMMQDLTNAGYSPDTSEVFLDIGEED--KETALFRHSEKLAIAYALISSGPGVT 706
IY +L+ + L + GY PD S+ L D KE +L HSE+LAIA+ LI+ P
Sbjct: 529 IYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTP 588
Query: 707 IRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
IRI KNLR+C DCH++ KL+SK +N E++VRD+ RFHHF+ G CSC ++W
Sbjct: 589 IRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 195/418 (46%), Gaps = 54/418 (12%)
Query: 56 SLLERCKSTYQLKQIHSKTIKMGLSSDP----VFGNKVIAFCCTQESGDVDYARQVFDTI 111
SL E C QLKQ+H+ T++ +P ++G K++ + DV+YA +VFD+I
Sbjct: 53 SLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYG-KILQL--SSSFSDVNYAFRVFDSI 109
Query: 112 PHPSVFIWNTMIKGYSR-ISCPKSGISMYLLMLAH-NIKPDSFTFPFLLKGFTNDMALKY 169
+ S F+WNT+I+ + +S + +Y ML PD TFPF+LK
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 169
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
GK + VK G +++V IHL+ CG +DLA K+F+ +V+WN M+ R
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI---VEPN 286
P+ T+ +LSAC+ L L+ G + + +L V +
Sbjct: 230 F-GEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 287 LVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
++++N L++M+ CG + A+ VF M+ RD+ SW +++ GFA G+ + A +FD+M +
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
+ RE +V+P+ T V +L AC H G + G
Sbjct: 349 K------------------RE-----------NVRPNSVTFVGLLIACNHRGFVNKG--- 376
Query: 407 KTYIDKNKINNDTFIGSAL------IDMYFKCGNVEKARKTFKEMHQK-DKFIWTAMI 457
+ Y D + D I AL +D+ + G + +A M K D IW +++
Sbjct: 377 RQYFD--MMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 10/272 (3%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
KQ+H + +K G D N +I G +D AR+VFD +P S+ WN+MI
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHL--YGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK---VLLDHAVKLGLDS 184
R S + ++ M + +PD +T +L +L G L + +
Sbjct: 229 RFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 185 NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY--NRVXXXXXXXXXXXX 242
++ V+ + I ++ CG + +A ++F ++ +WN M+ G+ +
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 243 XXXXGVSPNSVTLVLILSACSKLTDL-AGGNYVYQYLTEGIVEPNLVMENVLLDMFGACG 301
V PNSVT V +L AC+ + G Y + + +EP L ++D+ G
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 302 EMDAAKGVFDNMKTR-DVISWTSIVSGFANTG 332
+ A + +M + D + W S++ G
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/710 (33%), Positives = 380/710 (53%), Gaps = 39/710 (5%)
Query: 53 TPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
T +++L C ++ K +H +K+ L + V N ++ + G + A+ +F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM--YSKCGCITNAQMIFK 351
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLA--HNIKPDSFTFPFLLKGFTNDMAL 167
+ +V WNTM+ G+S + MLA ++K D T + ++ L
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Query: 168 KYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY 227
K L +++K N V AF+ ++ CG + A ++F+ + V +WN ++ G+
Sbjct: 412 PSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
+ G+ P+S T+ +LSACSKL L G V+ ++ +E
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE--- 528
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER 347
RD+ + S++S + + G++ + FD M ++
Sbjct: 529 ----------------------------RDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
VSW +I GYL+ AL +FR+M + ++ +M+ + AC+ L +L LG
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGE 467
Y K+ + +D FI +LIDMY K G++ ++ K F + +K W AMI+G I+G +
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 468 EALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCM 527
EA+ +F M + PDD+T++GVL+AC H+G++ +G ++ M G+KPN+ HY C+
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740
Query: 528 VDLLSRAGHLKEALDVILN-MPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPEN 586
+D+L RAG L +AL V+ M + + +W SLL +CR+H+N+E+ E A ++ ELEPE
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 800
Query: 587 GSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQS 646
YVLL N+YA +WE++R+VR M E ++K GCS +E+N ++ FV G++
Sbjct: 801 PENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGF 860
Query: 647 KEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVT 706
+EI + + ++ GY PDT V D+ EE+K L HSEKLA+ Y LI + G T
Sbjct: 861 EEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTT 920
Query: 707 IRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
IR+ KNLR+CVDCH AKL+SK RE+VVRD RFHHF++GVCSC ++W
Sbjct: 921 IRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 231/520 (44%), Gaps = 44/520 (8%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRI 129
+H +K GL D GN +++F T G V A Q+FD +P ++ WN+MI+ +S
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTH--GFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 130 SCPKSGISMYLLMLAHN----IKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+ + M+ N PD T +L + + GK + AVKL LD
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
L + A + ++S CG + A IF M + VV+WN M+ G++
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 246 XG--VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEM 303
G V + VT++ + C + L ++ Y + N ++ N + + CG +
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 304 DAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMN 363
A+ VF ++++ V SW +++ G A + L+ +D +L
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS------------------LDAHL--- 485
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
+M++S + PD FT+ S+L+AC+ L +L LG+ V +I +N + D F+
Sbjct: 486 ----------QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITP 483
+++ +Y CG + + F M K W +I G NG + AL +F M+ I
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 484 DDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV 543
I+ + V AC+ + GR+ A ++H ++ + ++D+ ++ G + ++ V
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHA-YALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 544 ILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELE 583
+ K + W +++ +H LA+ A K E++
Sbjct: 655 FNGLKEKSTA-SWNAMIMGYGIHG---LAKEAIKLFEEMQ 690
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 192/437 (43%), Gaps = 44/437 (10%)
Query: 79 LSSDPVFGNKVI---AFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSG 135
L +D V ++I A C G D +R VFD + ++F WN +I YSR
Sbjct: 116 LRNDDVLCTRIITMYAMC-----GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEV 170
Query: 136 ISMYLLMLAH-NIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIH 194
+ ++ M++ ++ PD FT+P ++K + G + VK GL ++FV A +
Sbjct: 171 LETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVS 230
Query: 195 LFSLCGLVDLAHKIFNMGDAWEVVTWNVML-----SGYNRVXXXXXXXXXXXXXXXXGVS 249
+ G V A ++F++ +V+WN M+ +G++
Sbjct: 231 FYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE-ESFLLLGEMMEENGDGAFM 289
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
P+ TLV +L C++ ++ G V+ + + ++ LV+ N L+DM+ CG + A+ +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 310 FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREAL 369
F ++V+SW ++V GF+ G D + + R+ L
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEG------------------------DTHGTFDVLRQML 385
Query: 370 ALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMY 429
A + VK DE T+++ + C H L + + Y K + + + +A + Y
Sbjct: 386 AGGED-----VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 430 FKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYI 489
KCG++ A++ F + K W A+I G A + +L M S + PD T
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 490 GVLSACTHAGMVEKGRK 506
+LSAC+ + G++
Sbjct: 501 SLLSACSKLKSLRLGKE 517
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 179/426 (42%), Gaps = 50/426 (11%)
Query: 193 IHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR-VXXXXXXXXXXXXXXXXGVSPN 251
I ++++CG D + +F+ + + WN ++S Y+R + P+
Sbjct: 127 ITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPD 186
Query: 252 SVTLVLILSACSKLTDLAGGNYVYQYLTE-GIVEPNLVMENVLLDMFGACGEMDAAKGVF 310
T ++ AC+ ++D+ G V+ + + G+VE
Sbjct: 187 HFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-------------------------- 220
Query: 311 DNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALA 370
DV ++VS + G + A + FD MPER+ VSW +MI + E+
Sbjct: 221 ------DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFL 274
Query: 371 LFREMQMSH----VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
L EM + PD T+V++L CA + LG+ V + K +++ + + +AL+
Sbjct: 275 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALM 334
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE--SSITPD 484
DMY KCG + A+ FK + K+ W M+ G + G + M+ + D
Sbjct: 335 DMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKAD 394
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
++T + + C H + ++ +++ N V ++ G L A V
Sbjct: 395 EVTILNAVPVCFHESFLPSLKELHC-YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453
Query: 545 LNMPVKP-NSIVWGSLLGACRVHKNVELAEMAAKQ--IIELEPENGSVYVLLCNIYAACK 601
+ K NS W +L+G + L+ A Q I L P++ +V C++ +AC
Sbjct: 454 HGIRSKTVNS--WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV----CSLLSACS 507
Query: 602 RWENLR 607
+ ++LR
Sbjct: 508 KLKSLR 513
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 34/266 (12%)
Query: 325 VSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
+S F TG +D + + + D S A + REAL L +Q S + D
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFL-------LVREALGLL--LQASGKRKD- 99
Query: 385 FTMVSILTACAHLGALELGEWVKTYID-KNKINNDTFIGSALIDMYFKCGNVEKARKTFK 443
+E+G + + ++ ND + + +I MY CG+ + +R F
Sbjct: 100 ---------------IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD 144
Query: 444 EMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS-ITPDDITYIGVLSACTHAGMVE 502
+ K+ F W A+I + N +E L F MI ++ + PD TY V+ AC AGM +
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSD 202
Query: 503 KGRKFFA-SMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLG 561
G + ++ G+ +V +V G + +AL + MP + N + W S++
Sbjct: 203 VGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER-NLVSWNSMI- 260
Query: 562 ACRVHKNVELAEMAAKQIIELEPENG 587
RV + +E + + E+ ENG
Sbjct: 261 --RVFSDNGFSEESFLLLGEMMEENG 284
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/553 (38%), Positives = 333/553 (60%), Gaps = 32/553 (5%)
Query: 205 AHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK 264
A +F ++V +N M GY+R G+ P++ T +L AC+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 265 LTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSI 324
L G ++ + ++ N+ + L++M+ C ++D+A+ VF
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF-------------- 187
Query: 325 VSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
D++ E V + AMI GY R N EAL+LFREMQ ++KP+E
Sbjct: 188 -----------------DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNE 230
Query: 385 FTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE 444
T++S+L++CA LG+L+LG+W+ Y K+ + +ALIDM+ KCG+++ A F++
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 445 MHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG 504
M KD W+AMIV A +G E+++ MF M ++ PD+IT++G+L+AC+H G VE+G
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
Query: 505 RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACR 564
RK+F+ M + GI P++ HYG MVDLLSRAG+L++A + I +P+ P ++W LL AC
Sbjct: 351 RKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS 410
Query: 565 VHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGC 624
H N++LAE +++I EL+ +G YV+L N+YA K+WE + +R +M +R K PGC
Sbjct: 411 SHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGC 470
Query: 625 SLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVF-LDIGEEDKET 683
S +E+N +++EF +GD + +++ L+ M+++L +GY PDTS V ++ +++KE
Sbjct: 471 SSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEI 530
Query: 684 ALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFH 743
L HSEKLAI + L+++ PG TIR+VKNLR+C DCH AKL+S + R++V+RD RFH
Sbjct: 531 TLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFH 590
Query: 744 HFRHGVCSCNNFW 756
HF G CSC +FW
Sbjct: 591 HFEDGKCSCGDFW 603
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 196/389 (50%), Gaps = 34/389 (8%)
Query: 52 ETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQES-GDVDYARQVFDT 110
+ PI L+ +C S +L QI + IK + D F K+I FC + + YAR +F+
Sbjct: 30 QNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEA 88
Query: 111 IPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYG 170
+ P + I+N+M +GYSR + P S+++ +L I PD++TFP LLK AL+ G
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRV 230
+ L ++KLGLD N++V I++++ C VD A +F+ VV +N M++GY R
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 231 XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVME 290
+ PN +TL+ +LS+C+ L L G ++++Y + + +
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV 350
L+DMF CG +D A +F+ M+ +D +W++++ +AN G+ +
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE--------------- 313
Query: 351 SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKTY 409
+++ +F M+ +V+PDE T + +L AC+H G +E G ++
Sbjct: 314 ----------------KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Query: 410 IDKNKINNDTFIGSALIDMYFKCGNVEKA 438
+ K I +++D+ + GN+E A
Sbjct: 358 VSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/613 (36%), Positives = 346/613 (56%), Gaps = 36/613 (5%)
Query: 144 AHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVD 203
+H + DS T+ L+K ++ A+ G ++ H G +F+ I+++ L++
Sbjct: 54 SHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLN 113
Query: 204 LAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
AH++F+ V++W M+S Y++ V PN T +L +C+
Sbjct: 114 DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN 173
Query: 264 KLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTS 323
++D+ + L GI++ L DV ++
Sbjct: 174 GMSDV-------RMLHCGIIKEGL---------------------------ESDVFVRSA 199
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
++ FA G+ + A FD+M D + W ++I G+ + + AL LF+ M+ + +
Sbjct: 200 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259
Query: 384 EFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK 443
+ T+ S+L AC L LELG ++ ++ K + D + +AL+DMY KCG++E A + F
Sbjct: 260 QATLTSVLRACTGLALLELG--MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFN 317
Query: 444 EMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEK 503
+M ++D W+ MI GLA NG+ +EAL +F M S P+ IT +GVL AC+HAG++E
Sbjct: 318 QMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 504 GRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGAC 563
G +F SM +GI P HYGCM+DLL +AG L +A+ ++ M +P+++ W +LLGAC
Sbjct: 378 GWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437
Query: 564 RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPG 623
RV +N+ LAE AAK++I L+PE+ Y LL NIYA ++W+++ E+RT M +RGIKK PG
Sbjct: 438 RVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPG 497
Query: 624 CSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKET 683
CS +E+N I+ F+ GD SHPQ E+ KL ++ LT GY P+T+ V D+ E E
Sbjct: 498 CSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMED 557
Query: 684 ALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFH 743
+L HSEKLA+A+ L++ IRI KNLR+C DCH KL SK R +V+RD R+H
Sbjct: 558 SLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYH 617
Query: 744 HFRHGVCSCNNFW 756
HF+ G CSC ++W
Sbjct: 618 HFQDGKCSCGDYW 630
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 168/359 (46%), Gaps = 44/359 (12%)
Query: 104 ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLK---G 160
A Q+FD +P +V W TMI YS+ + + + +LML N++P+ +T+ +L+ G
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 161 FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTW 220
++ L G +K GL+S++FV+ A I +F+ G + A +F+ + + W
Sbjct: 175 MSDVRMLHCG------IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 221 NVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE 280
N ++ G+ + G TL +L AC+ L L G + ++ +
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 281 GIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKY 340
+ +L++ N L+DM+ CG ++ A VF+ MK RDVI+W++++SG A G
Sbjct: 289 --YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG-------- 338
Query: 341 FDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
+ +EAL LF M+ S KP+ T+V +L AC+H G L
Sbjct: 339 -----------------------YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 401 ELGEWVKTYIDK-NKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMI 457
E G + + K I+ +ID+ K G ++ A K EM + D W ++
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 6/274 (2%)
Query: 56 SLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS 115
S+L C ++ +H IK GL SD + +I + G+ + A VFD +
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDV--FAKLGEPEDALSVFDEMVTGD 224
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLD 175
+WN++I G+++ S + ++ M + T +L+ T L+ G
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 176 HAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXX 235
H VK D +L + A + ++ CG ++ A ++FN +V+TW+ M+SG +
Sbjct: 285 HIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEPNLVMENVLL 294
G PN +T+V +L ACS L G Y ++ + + ++P ++
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMI 402
Query: 295 DMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSG 327
D+ G G++D A + + M+ D ++W +++
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 8/213 (3%)
Query: 353 TAMIDGYLRMNHFRE---ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTY 409
T ++ + R+ + R+ A+ +Q + D T ++ C A+ G + +
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 410 IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEA 469
+ N F+ + LI+MY K + A + F +M Q++ WT MI + ++A
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVD 529
L + M+ ++ P+ TY VL +C GM + + I+ G++ +V ++D
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCN--GMSDV--RMLHCGIIKEGLESDVFVRSALID 202
Query: 530 LLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
+ ++ G ++AL V M V ++IVW S++G
Sbjct: 203 VFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGG 234
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/707 (32%), Positives = 369/707 (52%), Gaps = 36/707 (5%)
Query: 53 TPISLLERCKST---YQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
T SL+ C + ++ +Q+H+ T K+G +S+ ++ + D++ A F
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA--KCADIETALDYFL 448
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+V +WN M+ Y + ++ ++ M I P+ +T+P +LK L+
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
G+ + +K N +V I +++ G +D A I +VV+W M++GY +
Sbjct: 509 GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 568
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
G+ + V L +SAC+ L L G ++ +L
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 628
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY 349
+N L+ ++ CG +I+ + F+Q D
Sbjct: 629 QNALVTLYSRCG-------------------------------KIEESYLAFEQTEAGDN 657
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTY 409
++W A++ G+ + + EAL +F M + + FT S + A + ++ G+ V
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV 717
Query: 410 IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEA 469
I K +++T + +ALI MY KCG++ A K F E+ K++ W A+I + +G G EA
Sbjct: 718 ITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEA 777
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVD 529
L F MI S++ P+ +T +GVLSAC+H G+V+KG +F SM ++G+ P HY C+VD
Sbjct: 778 LDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVD 837
Query: 530 LLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSV 589
+L+RAG L A + I MP+KP+++VW +LL AC VHKN+E+ E AA ++ELEPE+ +
Sbjct: 838 MLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSAT 897
Query: 590 YVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEI 649
YVLL N+YA K+W+ R M E+G+KK PG S +E+ I+ F GDQ+HP + EI
Sbjct: 898 YVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEI 957
Query: 650 YAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRI 709
+ +++ + + GY D + ++ E K+ +F HSEKLAI++ L+S V I +
Sbjct: 958 HEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINV 1017
Query: 710 VKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+KNLR+C DCH K VSK NRE++VRD RFHHF G CSC ++W
Sbjct: 1018 MKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 221/506 (43%), Gaps = 35/506 (6%)
Query: 67 LKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
++QIH++ + GL V N +I +G VD AR+VFD + W MI G
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDL--YSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 127 SRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNL 186
S+ C I ++ M I P + F +L +L+ G+ L +KLG S+
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX 246
+V A + L+ G + A IF+ + VT+N +++G ++
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
G+ P+S TL ++ ACS L G ++ Y T+ N +E LL+++ C +
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD---- 439
Query: 307 KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
I+ A YF + + V W M+ Y ++ R
Sbjct: 440 ---------------------------IETALDYFLETEVENVVLWNVMLVAYGLLDDLR 472
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
+ +FR+MQ+ + P+++T SIL C LG LELGE + + I K + ++ S LI
Sbjct: 473 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI 532
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
DMY K G ++ A KD WT MI G ++ALT F M++ I D++
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 592
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
+SAC +++G++ A + G ++ +V L SR G ++E+ +
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESY-LAFE 650
Query: 547 MPVKPNSIVWGSLLGACRVHKNVELA 572
++I W +L+ + N E A
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/530 (23%), Positives = 236/530 (44%), Gaps = 43/530 (8%)
Query: 45 CDPHCFGETPI-----SLLERCKSTYQLK---QIHSKTIKMGLSSDPVFGNKVIAFCCTQ 96
CD + G P S+L CK L+ Q+H +K+G SSD N +++
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF-- 334
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
G++ A +F + +NT+I G S+ + + ++ M ++PDS T
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
L+ + D L G+ L + KLG SN ++ A ++L++ C ++ A F +
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
VV WNVML Y + + PN T IL C +L DL G ++
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDL 336
+ + + N + +VL+DM+ G++D A + +DV+SWT++++G
Sbjct: 515 QIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG--------- 565
Query: 337 ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAH 396
Y + N +AL FR+M ++ DE + + ++ACA
Sbjct: 566 ----------------------YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 603
Query: 397 LGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAM 456
L AL+ G+ + + ++D +AL+ +Y +CG +E++ F++ D W A+
Sbjct: 604 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 663
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
+ G +G+ EEAL +F M I ++ T+ + A + +++G++ A +T + G
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT-KTG 722
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
++ + ++ G + +A L + K N + W +++ A H
Sbjct: 723 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKH 771
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/567 (23%), Positives = 251/567 (44%), Gaps = 54/567 (9%)
Query: 57 LLERCKSTY----QLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
LLE C T + +++HS+ +K+GL S+ K+ F + GD+ A +VFD +P
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK--GDLYGAFKVFDEMP 147
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
++F WN MIK + + +++ M++ N+ P+ TF +L+ A + G V
Sbjct: 148 ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE------ACRGGSV 201
Query: 173 LLD-----HAVKL--GLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLS 225
D HA L GL + V I L+S G VDLA ++F+ + +W M+S
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 226 GYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEP 285
G ++ G+ P +LSAC K+ L G ++ + +
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMP 345
+ + N L+ ++ G + +A+ +F NM
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNM-------------------------------S 350
Query: 346 ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEW 405
+RD V++ +I+G + + +A+ LF+ M + ++PD T+ S++ AC+ G L G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 406 VKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGH 465
+ Y K ++ I AL+++Y KC ++E A F E ++ +W M+V +
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 466 GEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYG 525
+ +F M I P+ TY +L C G +E G + S I+ + N
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH-SQIIKTNFQLNAYVCS 529
Query: 526 CMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPE 585
++D+ ++ G L A D+++ K + + W +++ + + A +Q+++
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 586 NGSVYVLLCNIYAACKRWENLREVRTI 612
+ V L N +AC + L+E + I
Sbjct: 589 SDEVG--LTNAVSACAGLQALKEGQQI 613
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 205/443 (46%), Gaps = 43/443 (9%)
Query: 147 IKPDSFTFPFLLKG-FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLA 205
I+P+ T +LL+G + +L G+ L +KLGLDSN + + + G + A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 206 HKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKL 265
K+F+ + TWN M+ V+PN T +L AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR-- 197
Query: 266 TDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIV 325
GG+ + V+E + A+ ++ ++ V+ ++
Sbjct: 198 ----GGSVAFD-----------VVEQI------------HARILYQGLRDSTVVC-NPLI 229
Query: 326 SGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEF 385
++ G +DLAR+ FD + +D+ SW AMI G + EA+ LF +M + + P +
Sbjct: 230 DLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPY 289
Query: 386 TMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM 445
S+L+AC + +LE+GE + + K ++DT++ +AL+ +YF GN+ A F M
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 446 HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGR 505
Q+D + +I GL+ G+GE+A+ +F M + PD T ++ AC+ G + +G+
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 506 KFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA--- 562
+ A T + G N G +++L ++ ++ ALD L V+ N ++W +L A
Sbjct: 410 QLHA-YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGL 467
Query: 563 -------CRVHKNVELAEMAAKQ 578
R+ + +++ E+ Q
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQ 490
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/658 (35%), Positives = 350/658 (53%), Gaps = 56/658 (8%)
Query: 104 ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN 163
AR VF+ +P +V W M+KGY + S++ M N ++ + G +
Sbjct: 98 ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLID 153
Query: 164 DMALKYGKVLLDH-AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNV 222
D + + L D VK ++ I G VD A IF+ VVTW
Sbjct: 154 DGRIDKARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTT 208
Query: 223 MLSGY---NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLT 279
M++GY NRV V + L
Sbjct: 209 MITGYRQNNRVD------------------------------------------VARKLF 226
Query: 280 EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARK 339
E + E V +L + G ++ A+ F+ M + VI+ +++ GF G+I AR+
Sbjct: 227 EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARR 286
Query: 340 YFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGA 399
FD M +RD +W MI Y R EAL LF +MQ V+P +++SIL+ CA L +
Sbjct: 287 VFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLAS 346
Query: 400 LELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVG 459
L+ G V ++ + + ++D ++ S L+ MY KCG + KA+ F KD +W ++I G
Sbjct: 347 LQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISG 406
Query: 460 LAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKP 519
A +G GEEAL +F M S P+ +T I +L+AC++AG +E+G + F SM + + P
Sbjct: 407 YASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTP 466
Query: 520 NVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQI 579
V HY C VD+L RAG + +A+++I +M +KP++ VWG+LLGAC+ H ++LAE+AAK++
Sbjct: 467 TVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKL 526
Query: 580 IELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAG 639
E EP+N YVLL +I A+ +W ++ VR M + K PGCS +E+ ++ F G
Sbjct: 527 FENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRG 586
Query: 640 D-QSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYAL 698
++HP+ I LE L AGYSPD S V D+ EE+K +L RHSE+LA+AY L
Sbjct: 587 GIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGL 646
Query: 699 ISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+ GV IR++KNLR+C DCH KL+SK RE+++RD RFHHF +G CSC ++W
Sbjct: 647 LKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 165/379 (43%), Gaps = 45/379 (11%)
Query: 82 DPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLL 141
D V +I C + G VD AR +FD + +V W TMI GY + + ++ +
Sbjct: 171 DVVASTNMIGGLCRE--GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 142 MLAHN-IKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCG 200
M + S + L G D A ++ +V+ V A I F G
Sbjct: 229 MPEKTEVSWTSMLLGYTLSGRIED-AEEFFEVMPMKPV--------IACNAMIVGFGEVG 279
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS 260
+ A ++F++ + + TW M+ Y R GV P+ +L+ ILS
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 261 ACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVIS 320
C+ L L G V+ +L + ++ + +VL+ M+ CGE+ AK VFD ++D+I
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIM 399
Query: 321 WTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHV 380
W SI+SG+A+ G + A K F +MP S
Sbjct: 400 WNSIISGYASHGLGEEALKIFHEMPS-------------------------------SGT 428
Query: 381 KPDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKAR 439
P++ T+++ILTAC++ G LE G E ++ K + S +DM + G V+KA
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 440 KTFKEMHQK-DKFIWTAMI 457
+ + M K D +W A++
Sbjct: 489 ELIESMTIKPDATVWGALL 507
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 147/342 (42%), Gaps = 46/342 (13%)
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV 350
N ++ + + G A+ +FD M R+V+SW +VSG+ I AR F+ MPER+ V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 351 SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYI 410
SWTAM+ GY++ EA +LF M + +E + + G ++ +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKA---RKLY 164
Query: 411 DKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEAL 470
D + D + +I + G V++AR F EM +++ WT MI G N + A
Sbjct: 165 DMMPV-KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 471 TMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI------------- 517
+F M E + ++++ +L T +G +E +FF M ++ I
Sbjct: 224 KLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVG 279
Query: 518 --------------KPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLL 560
+ N T G M+ R G EALD+ M V+P+ S+L
Sbjct: 280 EISKARRVFDLMEDRDNATWRG-MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISIL 338
Query: 561 GACRVHKNVELAEMAAKQIIELEPENGSVYV--LLCNIYAAC 600
C +++ ++ + ++ VYV +L +Y C
Sbjct: 339 SVCATLASLQYGRQVHAHLVRCQFDD-DVYVASVLMTMYVKC 379
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 21/253 (8%)
Query: 301 GEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYL 360
G+++ A+ FD+++ + + SW SIVSG+ + G AR+ FD+M ER+ VSW ++ GY+
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 361 RMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTF 420
+ EA +F M +V MV +G E W ++N+++
Sbjct: 91 KNRMIVEARNVFELMPERNV-VSWTAMVKGYMQEGMVGEAESLFW--RMPERNEVSWTVM 147
Query: 421 IGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS 480
G + D G ++KARK + M KD T MI GL G +EA +F M E +
Sbjct: 148 FGGLIDD-----GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 481 ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL--SRAGHLK 538
+ +T+ +++ V+ RK F M P T LL + +G ++
Sbjct: 203 V----VTWTTMITGYRQNNRVDVARKLFEVM-------PEKTEVSWTSMLLGYTLSGRIE 251
Query: 539 EALDVILNMPVKP 551
+A + MP+KP
Sbjct: 252 DAEEFFEVMPMKP 264
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/582 (36%), Positives = 339/582 (58%), Gaps = 14/582 (2%)
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV--VTWNVMLSGYNRVXXXXXXXXXXXXXX 244
++ A ++ G + A K+F+ E V W +LS ++R
Sbjct: 44 YLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR 103
Query: 245 XXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMD 304
V + V++V + C+KL DL + + V ++ + N L+DM+G CG +
Sbjct: 104 RKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVS 163
Query: 305 AAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
K +F+ ++ + V+SWT ++ ++ R+ F +MPER+ V+WT M+ GYL
Sbjct: 164 EVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGF 223
Query: 365 FREALALFREMQMSHVKPDEF-TMVSILTACAHLGALELGEWVKTYIDKNKI-------N 416
RE L L EM F T+ S+L+ACA G L +G WV Y K ++
Sbjct: 224 TREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASY 283
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM 476
+D +G+AL+DMY KCGN++ + F+ M +++ W A+ GLA++G G + MF M
Sbjct: 284 DDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM 343
Query: 477 IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
I + PDD+T+ VLSAC+H+G+V++G + F S+ +G++P V HY CMVDLL RAG
Sbjct: 344 IRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGL 401
Query: 537 LKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNI 596
++EA ++ MPV PN +V GSLLG+C VH VE+AE +++I++ P N +L+ N+
Sbjct: 402 IEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNM 461
Query: 597 YAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENM 656
Y A R + +R + +RGI+K PG S + +N ++ F +GD+SHP++KEIY KL +
Sbjct: 462 YVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEV 521
Query: 657 MQDLTNAGYSPDTSE-VFLDIGE-EDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLR 714
++ + +AGY PD S V G+ E+KE AL HSEKLA+ + L+ + P + + KNLR
Sbjct: 522 IERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLR 581
Query: 715 MCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+C DCH K+VSK Y+RE+++RD+ RFH F+ G CSC+++W
Sbjct: 582 ICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 199/470 (42%), Gaps = 90/470 (19%)
Query: 68 KQIHSKTIKMGLSSDP--VFGNKVIAFCCTQESGDVDYARQVFDTIP--HPSVFIWNTMI 123
K++H+ GL P N + F + SG++ A+++FD IP W T++
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYAS--SGEMVTAQKLFDEIPLSEKDNVDWTTLL 83
Query: 124 KGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLD 183
+SR + + +++ M ++ D + L L + + AVK+G+
Sbjct: 84 SSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVL 143
Query: 184 SNLFVQKAFIHLFSLCGLVDLAHKIFNMGD---------------AWE------------ 216
+++ V A + ++ CGLV +IF + WE
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 217 ----VVTWNVMLSGY-NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGG 271
V W VM++GY G N VTL +LSAC++ +L G
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 272 NYVYQY-------LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSI 324
+V+ Y + E ++++ L+DM+ CG +D++ VF M+ R+V++W ++
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNAL 323
Query: 325 VSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
SG A G+ R D P+ + RE VKPD+
Sbjct: 324 FSGLAMHGK---GRMVIDMFPQ------------------------MIRE-----VKPDD 351
Query: 385 FTMVSILTACAHLGALELGEW-----VKTYIDKNKINNDTFIGSALIDMYFKCGNVEKAR 439
T ++L+AC+H G ++ G W ++ Y + K+++ + ++D+ + G +E+A
Sbjct: 352 LTFTAVLSACSHSGIVDEG-WRCFHSLRFYGLEPKVDHY----ACMVDLLGRAGLIEEAE 406
Query: 440 KTFKEMH-QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITY 488
+EM ++ + +++ +++G E A + +I+ ++P + Y
Sbjct: 407 ILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQ--MSPGNTEY 454
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 153/373 (41%), Gaps = 75/373 (20%)
Query: 257 LILSACSKLTDLAGGNYVYQYLTEGIVE--PNLVMENVLLDMFGACGEMDAAKGVFDN-- 312
L+L C+ + L G ++ LT ++ P + N L + + GEM A+ +FD
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 313 MKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALF 372
+ +D + WT+++S F+ G L +N ++ LF
Sbjct: 71 LSEKDNVDWTTLLSSFSRYG---------------------------LLVN----SMKLF 99
Query: 373 REMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKC 432
EM+ V+ D+ ++V + CA L L + K + + +AL+DMY KC
Sbjct: 100 VEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKC 159
Query: 433 G-------------------------------NVEKARKTFKEMHQKDKFIWTAMIVGLA 461
G +E+ R+ F EM +++ WT M+ G
Sbjct: 160 GLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYL 219
Query: 462 INGHGEEALTMFSNMI-ESSITPDDITYIGVLSACTHAGMVEKGR--KFFA----SMTIQ 514
G E L + + M+ + +T +LSAC +G + GR +A M +
Sbjct: 220 GAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGE 279
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH-KNVELAE 573
+V +VD+ ++ G++ +++V M K N + W +L +H K + +
Sbjct: 280 EASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVID 338
Query: 574 MAAKQIIELEPEN 586
M + I E++P++
Sbjct: 339 MFPQMIREVKPDD 351
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/717 (33%), Positives = 376/717 (52%), Gaps = 42/717 (5%)
Query: 45 CDPHCFGETPISLLERC---KSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDV 101
CD LL +C +S +K I + +K G ++ + G+K++ + + GD+
Sbjct: 59 CDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVD--ASLKCGDI 115
Query: 102 DYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGF 161
DYARQVFD + + WN++I + K + MY LM+ +N+ PD +T + K F
Sbjct: 116 DYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAF 175
Query: 162 TNDMALKYGKVLLDHAVKLGLD-SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTW 220
++ K + AV LGL+ SN+FV A + ++ G A + + + +VV
Sbjct: 176 SDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLI 235
Query: 221 NVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE 280
++ GY++ V PN T +L +C L D+ G ++ + +
Sbjct: 236 TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Query: 281 GIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKY 340
E L + LL M+ C +D + VF ++ + +SWTS++SG G+ ++
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEM---- 351
Query: 341 FDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
AL FR+M +KP+ FT+ S L C++L
Sbjct: 352 ---------------------------ALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMF 384
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGL 460
E G + + K + D + GS LID+Y KCG + AR F + + D MI
Sbjct: 385 EEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSY 444
Query: 461 AINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN 520
A NG G EAL +F MI + P+D+T + VL AC ++ +VE+G + F S + N
Sbjct: 445 AQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN 504
Query: 521 VTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQII 580
HY CMVDLL RAG L+EA +++ + P+ ++W +LL AC+VH+ VE+AE ++I+
Sbjct: 505 -DHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKIL 562
Query: 581 ELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGD 640
E+EP + +L+ N+YA+ +W + E+++ M + +KK P S +E+N + F+AGD
Sbjct: 563 EIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGD 622
Query: 641 Q-SHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALI 699
SHP S++I LE +++ + GY D S VF D+ E KE +L +HSEKLAIA+A +
Sbjct: 623 LFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA-V 681
Query: 700 SSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
G +IRI+KNLR+CVDCH K+VS+ RE++ RD RFHHFR G CSC ++W
Sbjct: 682 WRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/599 (35%), Positives = 346/599 (57%), Gaps = 4/599 (0%)
Query: 162 TNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWN 221
+ L K L H VKLG+ + ++++ CG A ++F+ + + W
Sbjct: 14 ARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWA 73
Query: 222 VMLSGYNRVXXX-XXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE 280
+L+ N+ G+ P+ ++ AC+ L + G V+ +
Sbjct: 74 SVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIV 133
Query: 281 GIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKY 340
+ V+++ L+DM+ CG +++AK VFD+++ ++ ISWT++VSG+A +G+ + A +
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193
Query: 341 FDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKP-DEFTMVSILTACAHLGA 399
F +P ++ SWTA+I G+++ EA ++F EM+ V D + SI+ ACA+L A
Sbjct: 194 FRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA 253
Query: 400 LELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVG 459
G V + ++ FI +ALIDMY KC +V A+ F M +D WT++IVG
Sbjct: 254 SIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 460 LAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKP 519
+A +G E+AL ++ +M+ + P+++T++G++ AC+H G VEKGR+ F SMT +GI+P
Sbjct: 314 MAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRP 373
Query: 520 NVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQI 579
++ HY C++DLL R+G L EA ++I MP P+ W +LL AC+ ++ A +
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Query: 580 I-ELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVA 638
+ + ++ S Y+LL NIYA+ W + E R + E ++K PG S +E+ F A
Sbjct: 434 VSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYA 493
Query: 639 GDQSHPQSKEIYAKLENMMQDL-TNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYA 697
G+ SHP ++I+ L+ + +++ GY PDTS + D+ E++KE LF HSE+ A+AY
Sbjct: 494 GETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYG 553
Query: 698 LISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
L+ + PG IRIVKNLR+C DCH + K +S+ RE++VRD TR+HHF+ G CSCN+FW
Sbjct: 554 LLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/506 (21%), Positives = 211/506 (41%), Gaps = 73/506 (14%)
Query: 47 PHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQ 106
PH + + L R ++ K +H+ +K+G+ N ++ + G +A Q
Sbjct: 4 PHYLHQ--LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNV--YGKCGAASHALQ 59
Query: 107 VFDTIPHPSVFIWNTMIKGYSRISCP-KSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDM 165
VFD +PH W +++ ++ + K+ + + ++PD F F L+K N
Sbjct: 60 VFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLG 119
Query: 166 ALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLS 225
++ +G+ + H + ++ V+ + + +++ CGL++ A +F+ ++W M+S
Sbjct: 120 SIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVS 179
Query: 226 GYNRVXXXX-----------------XXXXXXXXXXXXGVSPNSV-------------TL 255
GY + G+ SV L
Sbjct: 180 GYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPL 239
Query: 256 VL--ILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNM 313
VL I+ AC+ L G V+ + + + + N L+DM+ C ++ AAK +F M
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299
Query: 314 KTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFR 373
+ RDV+SWTS++ G A GQ + +ALAL+
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAE-------------------------------KALALYD 328
Query: 374 EMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKC 432
+M VKP+E T V ++ AC+H+G +E G E ++ I + L+D+ +
Sbjct: 329 DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 388
Query: 433 GNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYI-- 489
G +++A M D+ W A++ G G+ + + +++ S D TYI
Sbjct: 389 GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILL 448
Query: 490 -GVLSACTHAGMVEKGRKFFASMTIQ 514
+ ++ + G V + R+ M ++
Sbjct: 449 SNIYASASLWGKVSEARRKLGEMEVR 474
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 391 LTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDK 450
L CA L + + +I K I + + L+++Y KCG A + F EM +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 451 FIWTAMIVGL-AINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFA 509
W +++ L N G+ S S + PDD + ++ AC + G ++ GR+
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 510 SMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
+ V +VD+ ++ G L A V ++ VK N+I W +++
Sbjct: 130 HFIVSEYANDEVVK-SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMV 178
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/560 (38%), Positives = 324/560 (57%), Gaps = 45/560 (8%)
Query: 205 AHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK 264
A ++F+ + WN + GY R GV P+ T ++ A S+
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 265 LTDLAGGNYVYQYLTE------GIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDV 318
L D + G ++ ++ + GIV LVM M+ GE+ +A+ +F++M+
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVM------MYMKFGELSSAEFLFESMQV--- 172
Query: 319 ISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMS 378
+D V+W A + ++ + AL F +M
Sbjct: 173 ----------------------------KDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 379 HVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKA 438
V+ D FT+VS+L+AC LG+LE+GE + K +I+ + + +A +DM+ KCGN E A
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 439 RKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHA 498
R F+EM Q++ W+ MIVG A+NG EALT+F+ M + P+ +T++GVLSAC+HA
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 499 GMVEKGRKFFASMTIQH--GIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVW 556
G+V +G+++F+ M + ++P HY CMVDLL R+G L+EA + I MPV+P++ +W
Sbjct: 325 GLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIW 384
Query: 557 GSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMER 616
G+LLGAC VH+++ L + A ++E P+ GS +VLL NIYAA +W+ + +VR+ M +
Sbjct: 385 GALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKL 444
Query: 617 GIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDI 676
G KK S +E G I+ F GD+SHPQSK IY KL+ +++ + GY PDT VF D+
Sbjct: 445 GTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDV 504
Query: 677 GEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVV 736
E+KE +L HSEKLAIA+ LI PG IR++KNLR C DCH +K VS + E+++
Sbjct: 505 EMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIM 564
Query: 737 RDKTRFHHFRHGVCSCNNFW 756
RDK RFHHFR+GVCSC FW
Sbjct: 565 RDKNRFHHFRNGVCSCKEFW 584
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 187/405 (46%), Gaps = 43/405 (10%)
Query: 66 QLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
QLK+IH+ ++ G S +++ GD+ YARQVFD + P +F+WNT+ KG
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVV--IGDMCYARQVFDEMHKPRIFLWNTLFKG 83
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
Y R P + +Y M ++PD FT+PF++K + G L H VK G
Sbjct: 84 YVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
V + ++ G + A +F ++V WN L+ +
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
V +S T+V +LSAC +L L G +Y + ++ N+++EN LDM CG +A
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A+ +F+ MK R+V+SW++++ G+A G
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDS------------------------------- 292
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIG--- 422
REAL LF MQ ++P+ T + +L+AC+H G + G K Y +ND +
Sbjct: 293 REALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEG---KRYFSLMVQSNDKNLEPRK 349
Query: 423 ---SALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAIN 463
+ ++D+ + G +E+A + K+M + D IW A++ A++
Sbjct: 350 EHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 2/239 (0%)
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVK 381
T ++ G + AR+ FD+M + W + GY+R E+L L+++M+ V+
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 382 PDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKT 441
PDEFT ++ A + LG G + ++ K + + L+ MY K G + A
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL 166
Query: 442 FKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMV 501
F+ M KD W A + G+ AL F+ M ++ D T + +LSAC G +
Sbjct: 167 FESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSL 226
Query: 502 EKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
E G + + + I N+ +D+ + G+ EA V+ + N + W +++
Sbjct: 227 EIGEEIY-DRARKEEIDCNIIVENARLDMHLKCGN-TEAARVLFEEMKQRNVVSWSTMI 283
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/631 (34%), Positives = 346/631 (54%), Gaps = 9/631 (1%)
Query: 131 CPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQK 190
C + + + +L KP + T+ L++ + AL+ GK + +H G + +
Sbjct: 65 CGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 191 AFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSP 250
+ +++ CG + A K+F+ ++ +WNVM++GY V
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEK 180
Query: 251 NSVTLVLILSACSKLTDLAGGNYVYQYLTE-GIVEPNLVMENVLLDMFGACGEMDAAKGV 309
+S + +++ K +Y + PN+ ++ + A + K +
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 310 FDNMKT----RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
++ D + W+S++ + G ID AR FD++ E+D VSWT+MID Y + + +
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
RE +LF E+ S +P+E+T +L ACA L ELG+ V Y+ + + +F S+L
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
+DMY KCGN+E A+ + D WT++I G A NG +EAL F +++S PD
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
+T++ VLSACTHAG+VEKG +FF S+T +H + HY C+VDLL+R+G ++ VI
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
MP+KP+ +W S+LG C + N++LAE AA+++ ++EPEN YV + NIYAA +WE
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 540
Query: 606 LREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGY 665
++R M E G+ K PG S E+ + F+A D SHP +I L + + + GY
Sbjct: 541 EGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGY 600
Query: 666 SPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKL 725
P TS V D+ +E KE L HSEKLA+A+A++S+ G I++ KNLR CVDCH K
Sbjct: 601 VPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKF 660
Query: 726 VSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+S R++ VRD TRFH F +G CSC ++W
Sbjct: 661 ISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 194/419 (46%), Gaps = 37/419 (8%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLM-LAHNIKPDSFTFP 155
E G ++ AR++FD + + W M+ GY + P+ + +Y LM N +P+ FT
Sbjct: 163 EVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVS 222
Query: 156 FLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAW 215
+ ++ GK + H V+ GLDS+ + + + ++ CG +D A IF+
Sbjct: 223 IAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK 282
Query: 216 EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY 275
+VV+W M+ Y + PN T +L+AC+ LT G V+
Sbjct: 283 DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVH 342
Query: 276 QYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQID 335
Y+T +P + L+DM+ CG +++AK V D D++SWTS++ G A GQ D
Sbjct: 343 GYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPD 402
Query: 336 LARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
A KYFD + + S KPD T V++L+AC
Sbjct: 403 EALKYFDLLLK-------------------------------SGTKPDHVTFVNVLSACT 431
Query: 396 HLGALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-DKFIW 453
H G +E G E+ + +K+++++ + + L+D+ + G E+ + EM K KF+W
Sbjct: 432 HAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLW 491
Query: 454 TAMIVGLAINGHGEEALTMFSNMIESSITPDD-ITYIGVLSACTHAGMVEKGRKFFASM 511
+++ G + G+ + A + + I P++ +TY+ + + AG E+ K M
Sbjct: 492 ASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGKMRKRM 548
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 136/315 (43%), Gaps = 9/315 (2%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K+IH ++ GL SD V + ++ + G +D AR +FD I V W +MI Y
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDM--YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ S + G S++ ++ +P+ +TF +L + + GK + + ++G D F
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+ + +++ CG ++ A + + ++V+W ++ G + G
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 248 VSPNSVTLVLILSACSKLTDLAGG-NYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
P+ VT V +LSAC+ + G + Y + + L+D+ G +
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQL 475
Query: 307 KGVFDNMKTR-DVISWTSIVSGFANTGQIDL----ARKYFDQMPERDYVSWTAMIDGYLR 361
K V M + W S++ G + G IDL A++ F PE + V++ M + Y
Sbjct: 476 KSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE-NPVTYVTMANIYAA 534
Query: 362 MNHFREALALFREMQ 376
+ E + + MQ
Sbjct: 535 AGKWEEEGKMRKRMQ 549
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/632 (34%), Positives = 336/632 (53%), Gaps = 37/632 (5%)
Query: 131 CPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQK 190
C + + + +L+ P T+ L+ + +L + H + G D + F+
Sbjct: 57 CKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLAT 116
Query: 191 AFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSP 250
I ++S G VD A K+F+ + WN + GV
Sbjct: 117 KLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES 176
Query: 251 NSVTLVLILSAC----SKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
+ T +L AC + L G ++ +LT ++ + L+DM+
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY--------- 227
Query: 307 KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
A G +D A F MP R+ VSW+AMI Y +
Sbjct: 228 ----------------------ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 367 EALALFREM--QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSA 424
EAL FREM + P+ TMVS+L ACA L ALE G+ + YI + +++ + SA
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 425 LIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPD 484
L+ MY +CG +E ++ F MH +D W ++I ++G+G++A+ +F M+ + +P
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPT 385
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
+T++ VL AC+H G+VE+G++ F +M HGIKP + HY CMVDLL RA L EA ++
Sbjct: 386 PVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMV 445
Query: 545 LNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWE 604
+M +P VWGSLLG+CR+H NVELAE A++++ LEP+N YVLL +IYA + W+
Sbjct: 446 QDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWD 505
Query: 605 NLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAG 664
++ V+ ++ RG++K PG ME+ +Y FV+ D+ +P ++I+A L + +D+ G
Sbjct: 506 EVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKG 565
Query: 665 YSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAK 724
Y P T V ++ E+KE + HSEKLA+A+ LI++ G IRI KNLR+C DCH K
Sbjct: 566 YIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTK 625
Query: 725 LVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+SK +E++VRD RFH F++GVCSC ++W
Sbjct: 626 FISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 186/409 (45%), Gaps = 41/409 (10%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
++H + G DP K+I + G VDYAR+VFD ++++WN + + +
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 129 ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMA----LKYGKVLLDHAVKLGLDS 184
+ + +Y M ++ D FT+ ++LK L GK + H + G S
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 185 NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY--NRVXXXXXXXXXXXX 242
++++ + +++ G VD A +F VV+W+ M++ Y N
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 243 XXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGE 302
SPNSVT+V +L AC+ L L G ++ Y+ ++ L + + L+ M+G CG+
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 303 MDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRM 362
++ + VFD M RDV+SW S++S + + GY
Sbjct: 336 LEVGQRVFDRMHDRDVVSWNSLISSYG--------------------------VHGY--- 366
Query: 363 NHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV-KTYIDKNKINNDTFI 421
++A+ +F EM + P T VS+L AC+H G +E G+ + +T + I
Sbjct: 367 --GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEH 424
Query: 422 GSALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEA 469
+ ++D+ + +++A K ++M + +W +++ I+G+ E A
Sbjct: 425 YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 6/276 (2%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K+IH+ + G SS ++ G VDYA VF +P +V W+ MI Y+
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDM--YARFGCVDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 128 RISCPKSGISMYLLML--AHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+ + + M+ + P+S T +L+ + AL+ GK++ + ++ GLDS
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
L V A + ++ CG +++ ++F+ +VV+WN ++S Y
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL-TEGIVEPNLVMENVLLDMFGACGEMD 304
G SP VT V +L ACS + G +++ + + ++P + ++D+ G +D
Sbjct: 380 NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLD 439
Query: 305 AAKGVFDNMKTRDVIS-WTSIVSGFANTGQIDLARK 339
A + +M+T W S++ G ++LA +
Sbjct: 440 EAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 330/556 (59%), Gaps = 32/556 (5%)
Query: 202 VDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSA 261
++ A IF D +N M+ GY V G P++ T +L A
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 262 CSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISW 321
C++L + G ++ + + +E ++ ++N L++M+G CG
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCG-------------------- 181
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM-QMSHV 380
+++L+ F+++ + SW++M+ M + E L LFR M +++
Sbjct: 182 -----------EMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNL 230
Query: 381 KPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARK 440
K +E MVS L ACA+ GAL LG + ++ +N + + ++L+DMY KCG ++KA
Sbjct: 231 KAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALH 290
Query: 441 TFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGM 500
F++M +++ ++AMI GLA++G GE AL MFS MI+ + PD + Y+ VL+AC+H+G+
Sbjct: 291 IFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGL 350
Query: 501 VEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
V++GR+ FA M + ++P HYGC+VDLL RAG L+EAL+ I ++P++ N ++W + L
Sbjct: 351 VKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
Query: 561 GACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKK 620
CRV +N+EL ++AA+++++L N Y+L+ N+Y+ + W+++ RT + +G+K+
Sbjct: 411 SQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQ 470
Query: 621 TPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEED 680
TPG S++E+ G + FV+ D+SHP+ KEIY L M L GYSPD +++ L++ EE+
Sbjct: 471 TPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEE 530
Query: 681 KETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKT 740
K+ L HS+K+AIA+ L+ + PG I+I +NLRMC DCH K +S Y RE+VVRD+
Sbjct: 531 KKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRN 590
Query: 741 RFHHFRHGVCSCNNFW 756
RFH F+ G CSC ++W
Sbjct: 591 RFHLFKGGTCSCKDYW 606
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 202/442 (45%), Gaps = 37/442 (8%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQE--SGDVDYARQVFDTIPHP 114
LL+RC + + KQ+H++ IK+ L F + C ++YA +F I P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLL 174
F +NTMI+GY + + + Y M+ +PD+FT+P LLK T +++ GK +
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX-X 233
KLGL++++FVQ + I+++ CG ++L+ +F ++ +W+ M+S +
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 234 XXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVL 293
+ +V L AC+ L G ++ +L I E N++++ L
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 294 LDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWT 353
+DM+ CG +D A +F M+ R+ +++++++SG A G+ +
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGE------------------ 317
Query: 354 AMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV-KTYIDK 412
AL +F +M ++PD VS+L AC+H G ++ G V + +
Sbjct: 318 -------------SALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKE 364
Query: 413 NKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEALT 471
K+ L+D+ + G +E+A +T + + +K+ IW + + + E
Sbjct: 365 GKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQI 424
Query: 472 MFSNMIE-SSITPDDITYIGVL 492
+++ SS P D I L
Sbjct: 425 AAQELLKLSSHNPGDYLLISNL 446
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 159/332 (47%), Gaps = 16/332 (4%)
Query: 326 SGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEF 385
SG+ N+ ++ A F + + + MI GY+ + F EAL + EM +PD F
Sbjct: 76 SGWENS--MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNF 133
Query: 386 TMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM 445
T +L AC L ++ G+ + + K + D F+ ++LI+MY +CG +E + F+++
Sbjct: 134 TYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL 193
Query: 446 HQKDKFIWTAMIVGLAINGHGEEALTMFSNMI-ESSITPDDITYIGVLSACTHAGMVEKG 504
K W++M+ A G E L +F M E+++ ++ + L AC + G + G
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 505 RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACR 564
+ +++ + N+ +VD+ + G L +AL + M K N++ + +++
Sbjct: 254 MSIHGFL-LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLA 311
Query: 565 VHKNVELA-EMAAKQIIE-LEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTP 622
+H E A M +K I E LEP++ VYV + N + + R V M++ G K P
Sbjct: 312 LHGEGESALRMFSKMIKEGLEPDH-VVYVSVLNACSHSGLVKEGRRVFAEMLKEG-KVEP 369
Query: 623 -----GC--SLMEMNGIIYEFVAGDQSHPQSK 647
GC L+ G++ E + QS P K
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEK 401
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/683 (33%), Positives = 357/683 (52%), Gaps = 91/683 (13%)
Query: 81 SDPVFG-NKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMY 139
D +F NK+IA C SGD+D A +VF + + WN+++ G S+
Sbjct: 58 QDQIFPLNKIIARCV--RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSR------- 108
Query: 140 LLMLAHNI-----KPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIH 194
+M AH + +PD+F++ +L + ++ + + D
Sbjct: 109 -MMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDR------------------ 149
Query: 195 LFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVT 254
DA +WN M++GY R
Sbjct: 150 --------------MPFKDA---ASWNTMITGYAR------------------------- 167
Query: 255 LVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMK 314
G + L ++E N V N ++ + CG+++ A F
Sbjct: 168 --------------RGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP 213
Query: 315 TRDVISWTSIVSGFANTGQIDLARKYFDQMP-ERDYVSWTAMIDGYLRMNHFREALALFR 373
R V++WT++++G+ +++LA F M ++ V+W AMI GY+ + + L LFR
Sbjct: 214 VRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 374 EMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCG 433
M ++P+ + S L C+ L AL+LG + + K+ + ND ++LI MY KCG
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 434 NVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLS 493
+ A K F+ M +KD W AMI G A +G+ ++AL +F MI++ I PD IT++ VL
Sbjct: 334 ELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLL 393
Query: 494 ACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNS 553
AC HAG+V G +F SM + ++P HY CMVDLL RAG L+EAL +I +MP +P++
Sbjct: 394 ACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHA 453
Query: 554 IVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIM 613
V+G+LLGACRVHKNVELAE AA+++++L +N + YV L NIYA+ RWE++ VR M
Sbjct: 454 AVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRM 513
Query: 614 MERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVF 673
E + K PG S +E+ ++ F + D+ HP+ I+ KL+ + + + AGY P+
Sbjct: 514 KESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFAL 573
Query: 674 LDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRE 733
++ EE KE L HSEKLA+A+ I G I++ KNLR+C DCH+ K +S+ RE
Sbjct: 574 HNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKRE 633
Query: 734 LVVRDKTRFHHFRHGVCSCNNFW 756
++VRD TRFHHF+ G CSC ++W
Sbjct: 634 IIVRDTTRFHHFKDGSCSCGDYW 656
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/662 (33%), Positives = 367/662 (55%), Gaps = 50/662 (7%)
Query: 42 SSHCDPHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDV 101
SS D F + S ++ S ++ +H+ IK G S++ N++I + G +
Sbjct: 14 SSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLID--AYSKCGSL 71
Query: 102 DYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGF 161
+ RQVFD +P +++ WN+++ G +++ S++ M + D T+ ++ GF
Sbjct: 72 EDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM----PERDQCTWNSMVSGF 127
Query: 162 TND-----------MALKYGKVLLDHA------------------------VKLGLDSNL 186
M K G VL +++ K S++
Sbjct: 128 AQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDV 187
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFN-MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
++ A + ++S CG V+ A ++F+ MGD VV+WN +++ + +
Sbjct: 188 YIGSALVDMYSKCGNVNDAQRVFDEMGDR-NVVSWNSLITCFEQNGPAVEALDVFQMMLE 246
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVY-QYLTEGIVEPNLVMENVLLDMFGACGEMD 304
V P+ VTL ++SAC+ L+ + G V+ + + + ++++ N +DM+ C +
Sbjct: 247 SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 305 AAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
A+ +FD+M R+VI+ TS++SG+A AR F +M ER+ VSW A+I GY +
Sbjct: 307 EARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI------NND 418
EAL+LF ++ V P ++ +IL ACA L L LG ++ K+ +D
Sbjct: 367 NEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDD 426
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
F+G++LIDMY KCG VE+ F++M ++D W AMI+G A NG+G EAL +F M+E
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLE 486
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
S PD IT IGVLSAC HAG VE+GR +F+SMT G+ P HY CMVDLL RAG L+
Sbjct: 487 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLE 546
Query: 539 EALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYA 598
EA +I MP++P+S++WGSLL AC+VH+N+ L + A++++E+EP N YVLL N+YA
Sbjct: 547 EAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYA 606
Query: 599 ACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQ 658
+WE++ VR M + G+ K PGCS +++ G + F+ D+SHP+ K+I++ L+ ++
Sbjct: 607 ELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIA 666
Query: 659 DL 660
++
Sbjct: 667 EM 668
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/513 (41%), Positives = 310/513 (60%), Gaps = 40/513 (7%)
Query: 251 NSVTLVLILSACSKLTDLAGGNYVY-QYLTEGIVEPNLVMENVLLDMFGAC-GEMDAAKG 308
N ++ L C K DL GG ++ + ++G + +L+M L+D++ C DA K
Sbjct: 112 NPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLM-TTLMDLYSTCENSTDACK- 169
Query: 309 VFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREA 368
FD++P+RD VSW + YLR R+
Sbjct: 170 -------------------------------VFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 369 LALFREMQMS---HVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
L LF +M+ VKPD T + L ACA+LGAL+ G+ V +ID+N ++ + + L
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTL 258
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
+ MY +CG+++KA + F M +++ WTA+I GLA+NG G+EA+ F+ M++ I+P++
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEE 318
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASM-TIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
T G+LSAC+H+G+V +G FF M + + IKPN+ HYGC+VDLL RA L +A +I
Sbjct: 319 QTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLI 378
Query: 545 LNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWE 604
+M +KP+S +W +LLGACRVH +VEL E +IEL+ E YVLL N Y+ +WE
Sbjct: 379 KSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWE 438
Query: 605 NLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAG 664
+ E+R++M E+ I PGCS +E+ G ++EF+ D SHP+ +EIY L + Q L AG
Sbjct: 439 KVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAG 498
Query: 665 YSPD-TSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMA 723
Y + TSE+ EE+K AL HSEKLAIA+ ++ + PG TIR+ KNLR CVDCH A
Sbjct: 499 YVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFA 558
Query: 724 KLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
K VS Y+R ++VRD++RFHHF+ G CSCN+FW
Sbjct: 559 KFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 186/433 (42%), Gaps = 41/433 (9%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGL-SSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPH 113
+SL+ L+QIH+ ++ L + VF + + + D++Y+ +VF +
Sbjct: 15 LSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLN 74
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKP-DSFTFPFLLKGFTNDMALKYGKV 172
P++ NTMI+ +S P G ++ + ++ P + + F LK L G
Sbjct: 75 PTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQ 134
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY---NR 229
+ G S+ + + L+S C A K+F+ + V+WNV+ S Y R
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKR 194
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
V P+ VT +L L AC+ L L G V+ ++ E + L +
Sbjct: 195 TRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNL 254
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY 349
N L+ M+ CG MD A VF M+ R+V+SWT+++SG A
Sbjct: 255 SNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLA-------------------- 294
Query: 350 VSWTAMIDGYLRMNHF-REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGE--WV 406
MN F +EA+ F EM + P+E T+ +L+AC+H G + G +
Sbjct: 295 ------------MNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFD 342
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-DKFIWTAMIVGLAINGH 465
+ + KI + ++D+ + ++KA K M K D IW ++ ++G
Sbjct: 343 RMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGD 402
Query: 466 GEEALTMFSNMIE 478
E + S++IE
Sbjct: 403 VELGERVISHLIE 415
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 134/326 (41%), Gaps = 15/326 (4%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
QIH K G SD + ++ T E+ A +VFD IP WN + Y R
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENST--DACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 129 ISCPKSGISMYLLM---LAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+ + ++ M + +KPD T L+ N AL +GK + D + GL
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
L + + ++S CG +D A+++F VV+W ++SG
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEG--IVEPNLVMENVLLDMFGACGEM 303
G+SP TL +LSACS +A G + + G ++PNL ++D+ G +
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 304 DAAKGVFDNMKTR-DVISWTSIVSGFANTGQIDLARKYFDQMPE------RDYVSWTAMI 356
D A + +M+ + D W +++ G ++L + + E DYV
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTY 431
Query: 357 DGYLRMNHFREALALFREMQMSHVKP 382
+ E +L +E ++ H KP
Sbjct: 432 STVGKWEKVTELRSLMKEKRI-HTKP 456
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 367 EALALFREMQMSHVKP-DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
E LFR ++ + P + + L C G L G + I + +D+ + + L
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM---IESSIT 482
+D+Y C N A K F E+ ++D W + N + L +F M ++ +
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK 214
Query: 483 PDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALD 542
PD +T + L AC + G ++ G++ + ++G+ + +V + SR G + +A
Sbjct: 215 PDGVTCLLALQACANLGALDFGKQVHDFID-ENGLSGALNLSNTLVSMYSRCGSMDKAYQ 273
Query: 543 VILNMPVKPNSIVWGSLLGA 562
V M + N + W +L+
Sbjct: 274 VFYGMRER-NVVSWTALISG 292
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/696 (34%), Positives = 366/696 (52%), Gaps = 40/696 (5%)
Query: 68 KQIHSKTIKMGLSSDPV-FGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
+++H I GL V GN ++ + G + AR+VF + WN+MI G
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNM--YAKCGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 127 SRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNL 186
+ C + Y M H+I P SFT L + K G+ + ++KLG+D N+
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXX-XXXXXX 245
V A + L++ G ++ KIF+ + V+WN ++ R
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
G N +T +LSA S L+ G ++ + + EN L+ +G CGEMD
Sbjct: 511 AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDG 570
Query: 306 AKGVFDNM-KTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
+ +F M + RD ++W S MI GY+
Sbjct: 571 CEKIFSRMAERRDNVTWNS-------------------------------MISGYIHNEL 599
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSA 424
+AL L M + + D F ++L+A A + LE G V + + +D +GSA
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 659
Query: 425 LIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM-IESSITP 483
L+DMY KCG ++ A + F M ++ + W +MI G A +G GEEAL +F M ++ P
Sbjct: 660 LVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP 719
Query: 484 DDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV 543
D +T++GVLSAC+HAG++E+G K F SM+ +G+ P + H+ CM D+L RAG L + D
Sbjct: 720 DHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDF 779
Query: 544 ILNMPVKPNSIVWGSLLGA-CRVH-KNVELAEMAAKQIIELEPENGSVYVLLCNIYAACK 601
I MP+KPN ++W ++LGA CR + + EL + AA+ + +LEPEN YVLL N+YAA
Sbjct: 780 IEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 839
Query: 602 RWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLT 661
RWE+L + R M + +KK G S + M ++ FVAGD+SHP + IY KL+ + + +
Sbjct: 840 RWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899
Query: 662 NAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISS-GPGVTIRIVKNLRMCVDCH 720
+AGY P T D+ +E+KE L HSEKLA+A+ L + + IRI+KNLR+C DCH
Sbjct: 900 DAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCH 959
Query: 721 QMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
K +SK R++++RD RFHHF+ G CSC++FW
Sbjct: 960 SAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 222/521 (42%), Gaps = 48/521 (9%)
Query: 54 PISLLERCKSTYQLKQI-HSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
P+S ++ C + HS+ K L D N +I E+GD AR+VFD +P
Sbjct: 6 PLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLIN--AYLETGDSVSARKVFDEMP 63
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFT--NDMALKYG 170
+ W ++ GYSR K + M+ I + + F +L+ + + +G
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIHLFSLC-GLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
+ + KL + V I ++ C G V A F + V+WN ++S Y++
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTL-VLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
G P T L+ +ACS + EP++
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS------------------LTEPDVR 225
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
+ ++ G + D+ + +VS FA +G + ARK F+QM R+
Sbjct: 226 LLEQIMCTIQKSGLLT------------DLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 349 YVSWTAMIDGYLRMNHFREALALFREMQ-MSHVKPDEFTMVSILT-----ACAHLGALEL 402
V+ ++ G +R EA LF +M M V P+ + V +L+ + A L+
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESY--VILLSSFPEYSLAEEVGLKK 331
Query: 403 GEWVKTY-IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLA 461
G V + I ++ IG+ L++MY KCG++ AR+ F M KD W +MI GL
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 462 INGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNV 521
NG EA+ + +M I P T I LS+C + G++ +++ GI NV
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE-SLKLGIDLNV 450
Query: 522 THYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
+ ++ L + G+L E + +MP + + + W S++GA
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 139/294 (47%), Gaps = 15/294 (5%)
Query: 309 VFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREA 368
++ N +DV ++++ + TG ARK FD+MP R+ VSW ++ GY R +EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 369 LALFREMQMSHVKPDEFTMVSILTACAHLGALEL--GEWVKTYIDKNKINNDTFIGSALI 426
L R+M + +++ VS+L AC +G++ + G + + K D + + LI
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLI 146
Query: 427 DMYFKC-GNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
MY+KC G+V A F ++ K+ W ++I + G A +FS+M P +
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTE 206
Query: 486 ITYIG-VLSACTHAGMVEKGRKFFASM--TIQH-GIKPNVTHYGCMVDLLSRAGHLKEAL 541
T+ V +AC+ + E + + TIQ G+ ++ +V +++G L A
Sbjct: 207 YTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 542 DVILNMPVKPNSIVWGSLLGACRVHKNVELAE--MAAKQIIELEPENGSVYVLL 593
V M + + G ++G R E + M +I++ PE+ YV+L
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES---YVIL 314
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/605 (34%), Positives = 329/605 (54%), Gaps = 33/605 (5%)
Query: 154 FPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGD 213
+ LL + AL+ G+ + H +K +++ + + C ++ A K+ +
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 214 AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY 273
VV+W M+S Y++ PN T +L++C + + L G
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 274 VYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQ 333
++ + + + ++ + + LLDM+ A GQ
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMY-------------------------------AKAGQ 203
Query: 334 IDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA 393
I AR+ F+ +PERD VS TA+I GY ++ EAL +F + + P+ T S+LTA
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 394 CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIW 453
+ L L+ G+ ++ + ++ + ++LIDMY KCGN+ AR+ F M ++ W
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 454 TAMIVGLAINGHGEEALTMFSNMI-ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMT 512
AM+VG + +G G E L +F M E + PD +T + VLS C+H M + G F M
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 513 I-QHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVEL 571
++G KP HYGC+VD+L RAG + EA + I MP KP + V GSLLGACRVH +V++
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 443
Query: 572 AEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNG 631
E +++IE+EPEN YV+L N+YA+ RW ++ VR +MM++ + K PG S ++
Sbjct: 444 GESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQ 503
Query: 632 IIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEK 691
++ F A D++HP+ +E+ AK++ + + AGY PD S V D+ EE KE L HSEK
Sbjct: 504 TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEK 563
Query: 692 LAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCS 751
LA+ + LI++G G+ IR+ KNLR+CVDCH AK+ SK + RE+ +RDK RFH G+CS
Sbjct: 564 LALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICS 623
Query: 752 CNNFW 756
C ++W
Sbjct: 624 CGDYW 628
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 160/360 (44%), Gaps = 40/360 (11%)
Query: 104 ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN 163
AR+V D +P +V W MI YS+ ++++ M+ + KP+ FTF +L
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 164 DMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVM 223
L GK + VK DS++FV + + +++ G + A +IF +VV+ +
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 224 LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIV 283
++GY ++ G+SPN VT +L+A S L L G + ++ +
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL 285
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQ 343
V++N L+DM+ CG + A+ +FDNM R ISW
Sbjct: 286 PFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW---------------------- 323
Query: 344 MPERDYVSWTAMIDGYLRMNHFREALALFREMQ-MSHVKPDEFTMVSILTACAHLGALE- 401
AM+ GY + RE L LFR M+ VKPD T++++L+ C+H G +E
Sbjct: 324 ---------NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH-GRMED 373
Query: 402 --LGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVG 459
L + + T ++DM + G +++A + K M K TA ++G
Sbjct: 374 TGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP----TAGVLG 429
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 5/252 (1%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
KQIH +K S G+ ++ ++G + AR++F+ +P V +I GY+
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDM--YAKAGQIKEAREIFECLPERDVVSCTAIIAGYA 230
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
++ + + M+ + + + P+ T+ LL + L +GK H ++ L
Sbjct: 231 QLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 290
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR-VXXXXXXXXXXXXXXXX 246
+Q + I ++S CG + A ++F+ ++WN ML GY++
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 247 GVSPNSVTLVLILSACS--KLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMD 304
V P++VTL+ +LS CS ++ D + E +P ++DM G G +D
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410
Query: 305 AAKGVFDNMKTR 316
A M ++
Sbjct: 411 EAFEFIKRMPSK 422
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/667 (33%), Positives = 357/667 (53%), Gaps = 52/667 (7%)
Query: 104 ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN 163
A +VFD + +V W MI ++ P+ I +L M+ + D FT +
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 164 DMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLC---GLVDLAHKIFNMGDAWEVVTW 220
L GK L A++ GL + V+ + + +++ C G VD K+F+ + V++W
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 221 NVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE 280
+++GY + C+ T+ N + +T+
Sbjct: 340 TALITGY-------------------------------MKNCNLATEAI--NLFSEMITQ 366
Query: 281 GIVEPNLVMENVLLDMFGACGEMD---AAKGVFDNMKTRDVISWTSI----VSGFANTGQ 333
G VEPN F ACG + K V R + S +S+ +S F + +
Sbjct: 367 GHVEPN---HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 334 IDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA 393
++ A++ F+ + E++ VS+ +DG R +F +A L E+ + FT S+L+
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 394 CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIW 453
A++G++ GE + + + K ++ + + +ALI MY KCG+++ A + F M ++ W
Sbjct: 484 VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISW 543
Query: 454 TAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTI 513
T+MI G A +G L F+ MIE + P+++TY+ +LSAC+H G+V +G + F SM
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
Query: 514 QHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAE 573
H IKP + HY CMVDLL RAG L +A + I MP + + +VW + LGACRVH N EL +
Sbjct: 604 DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGK 663
Query: 574 MAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGII 633
+AA++I+EL+P + Y+ L NIYA +WE E+R M ER + K GCS +E+ I
Sbjct: 664 LAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKI 723
Query: 634 YEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETA----LFRHS 689
++F GD +HP + +IY +L+ ++ ++ GY PDT V + EE+ E L++HS
Sbjct: 724 HKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHS 783
Query: 690 EKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGV 749
EK+A+A+ LIS+ +R+ KNLR+C DCH K +S RE+V+RD RFHHF+ G
Sbjct: 784 EKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGK 843
Query: 750 CSCNNFW 756
CSCN++W
Sbjct: 844 CSCNDYW 850
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 203/462 (43%), Gaps = 46/462 (9%)
Query: 133 KSGISMYLLMLAHNIKP-DSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKA 191
+ +S LM I+P DS TF LLK + GK++ ++ ++ + + +
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 192 FIHLFSLCGLVDLAHKIFNMGDAW---EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGV 248
I L+S G A +F + +VV+W+ M++ Y G+
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 249 SPNSVTLVLILSACSKLTDLAGGNYVYQYLTE-GIVEPNLVMENVLLDMFGACGEMDAAK 307
PN ++ ACS + G +L + G E ++ + L+DMF +
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK------GE 216
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
F+N A K FD+M E + V+WT MI ++M RE
Sbjct: 217 NSFEN------------------------AYKVFDKMSELNVVTWTLMITRCMQMGFPRE 252
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
A+ F +M +S + D+FT+ S+ +ACA L L LG+ + ++ ++ + +D + +L+D
Sbjct: 253 AIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVD 310
Query: 428 MYFKC---GNVEKARKTFKEMHQKDKFIWTAMIVGLAINGH-GEEALTMFSNMI-ESSIT 482
MY KC G+V+ RK F M WTA+I G N + EA+ +FS MI + +
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVE 370
Query: 483 PDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALD 542
P+ T+ AC + G++ + G+ N + ++ + ++ +++A
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQ-AFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 543 VILNMPVKPNSIVWGSLL-GACRVHKNVELAEMAAKQIIELE 583
++ K N + + + L G CR + N E A +I E E
Sbjct: 430 AFESLSEK-NLVSYNTFLDGTCR-NLNFEQAFKLLSEITERE 469
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 176/405 (43%), Gaps = 38/405 (9%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
KQ+HS I+ GL D V + V + G VD R+VFD + SV W +I GY
Sbjct: 289 KQLHSWAIRSGLVDD-VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 128 R-ISCPKSGISMYLLMLAH-NIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+ + I+++ M+ +++P+ FTF K N + GK +L A K GL SN
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
V + I +F ++ A + F +V++N L G R
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
+ ++ T +LS + + + G ++ + + + N + N L+ M+ CG +D
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A VF+ M+ R+VISWTS+++GFA G + F+QM E
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG----------------- 570
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEW--VKTYIDKNKINNDTFIGS 423
VKP+E T V+IL+AC+H+G + G W + + +KI +
Sbjct: 571 --------------VKPNEVTYVAILSACSHVGLVSEG-WRHFNSMYEDHKIKPKMEHYA 615
Query: 424 ALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGE 467
++D+ + G + A + M Q D +W + ++ + E
Sbjct: 616 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTE 660
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 145/314 (46%), Gaps = 7/314 (2%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
KQ+ + K GL+S+ N VI+ +S ++ A++ F+++ ++ +NT + G
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFV--KSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
R + + + + +FTF LL G N +++ G+ + VKLGL N
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V A I ++S CG +D A ++FN + V++W M++G+ + G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEG-IVEPNLVMENVLLDMFGACGEMDAA 306
V PN VT V ILSACS + ++ G + + E ++P + ++D+ G + A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 307 KGVFDNMKTR-DVISWTSIVSG---FANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRM 362
+ M + DV+ W + + +NT LA + ++ + ++ + + Y
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA 690
Query: 363 NHFREALALFREMQ 376
+ E+ + R+M+
Sbjct: 691 GKWEESTEMRRKMK 704
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 137/309 (44%), Gaps = 15/309 (4%)
Query: 355 MIDGYLRMNHFREALALFREMQMSHVKP-DEFTMVSILTACAHLGALELGEWVKTYIDKN 413
+I +L R A++ M ++P D T S+L +C LG+ V + +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ---KDKFIWTAMIVGLAINGHGEEAL 470
I D+ + ++LI +Y K G+ KA F+ M + +D W+AM+ NG +A+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 471 TMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDL 530
+F +E + P+D Y V+ AC+++ V GR + + +V ++D+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 531 LSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPEN-GSV 589
+ + E + + + N + W ++ C + A + +++ S
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRC---MQMGFPREAIRFFLDMVLSGFESD 268
Query: 590 YVLLCNIYAACKRWENL---REVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQS 646
L ++++AC ENL +++ + + G+ CSL++M Y + D S
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDM----YAKCSADGSVDDC 324
Query: 647 KEIYAKLEN 655
++++ ++E+
Sbjct: 325 RKVFDRMED 333
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/765 (31%), Positives = 387/765 (50%), Gaps = 98/765 (12%)
Query: 55 ISLLERCKSTYQLKQIHSKTIK-MGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPH 113
I L R +S Y +K IH I+ + ++ N V A+ + S YAR+VFD IP
Sbjct: 14 IGLGARNQSRY-VKMIHGNIIRALPYPETFLYNNIVHAYALMKSS---TYARRVFDRIPQ 69
Query: 114 PSVFIWNTMIKGYSRISC------------PKSGISMYLLM-------------LAHNIK 148
P++F WN ++ YS+ + G++ +L+ A+N
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 149 PDSF-------TFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGL 201
F T +LK +++ + GK + +KLG +S L V +++++ G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 202 VDLAHKIFN-------------MG---------DAWEV--------VTWNVMLSGYNRVX 231
+ A K+F MG DA ++ V+W M+ G +
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 232 XXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMEN 291
G+ + +L AC L + G ++ + + ++ + +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
L+DM+ C + AK VFD MK +++ VS
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMK-------------------------------QKNVVS 338
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
WTAM+ GY + EA+ +F +MQ S + PD +T+ ++ACA++ +LE G
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
+ + + + ++L+ +Y KCG+++ + + F EM+ +D WTAM+ A G E +
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
+F M++ + PD +T GV+SAC+ AG+VEKG+++F MT ++GI P++ HY CM+DL
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYV 591
SR+G L+EA+ I MP P++I W +LL ACR N+E+ + AA+ +IEL+P + + Y
Sbjct: 519 SRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYT 578
Query: 592 LLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYA 651
LL +IYA+ +W+++ ++R M E+ +KK PG S ++ G ++ F A D+S P +IYA
Sbjct: 579 LLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYA 638
Query: 652 KLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVK 711
KLE + + + GY PDTS V D+ E K L HSE+LAIA+ LI G IR+ K
Sbjct: 639 KLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGK 698
Query: 712 NLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
NLR+CVDCH K +S RE++VRD RFH F+ G CSC +FW
Sbjct: 699 NLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 336/556 (60%), Gaps = 10/556 (1%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
PS+ ++N M+K + ++++ + + PD+FT P +LK + G+ +
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY-NRVXX 232
+AVK GL+ + +V + + +++ G +++ HK+F+ +VV+WN ++S Y
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENV 292
+ + T+V LSACS L +L G +Y+++ E ++ + N
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEF-EMSVRIGNA 187
Query: 293 LLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSW 352
L+DMF CG +D A+ VFD+M+ ++V WTS+V G+ +TG+ID AR F++ P +D V W
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 353 TAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 412
TAM++GY++ N F EAL LFR MQ + ++PD F +VS+LT CA GALE G+W+ YI++
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 413 NKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTM 472
N++ D +G+AL+DMY KCG +E A + F E+ ++D WT++I GLA+NG AL +
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 367
Query: 473 FSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLS 532
+ M + D IT++ VL+AC H G V +GRK F SMT +H ++P H C++DLL
Sbjct: 368 YYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLC 427
Query: 533 RAGHLKEALDVILNMPVKPNSI---VWGSLLGACRVHKNVELAEMAAKQIIELEPENGSV 589
RAG L EA ++I M + + V+ SLL A R + NV++AE A+++ ++E + S
Sbjct: 428 RAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA 487
Query: 590 YVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQ--SHPQSK 647
+ LL ++YA+ RWE++ VR M + GI+K PGCS +E++G+ +EF+ GD SHP+
Sbjct: 488 HTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMD 547
Query: 648 EIYAKLE---NMMQDL 660
EI + L N+M DL
Sbjct: 548 EINSMLHQTTNLMLDL 563
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 178/429 (41%), Gaps = 71/429 (16%)
Query: 54 PISL--LERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTI 111
P+ L + R + + +++H +K GL D N ++ + G ++ +VFD +
Sbjct: 50 PVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASL--GKIEITHKVFDEM 107
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAH-NIKPDSFT----------------- 153
P V WN +I Y + I ++ M N+K D T
Sbjct: 108 PQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIG 167
Query: 154 ---FPFLLKGFTNDMALKYGKVLLDHAVKLGL------------DSNLFVQKAFIHLFSL 198
+ F++ F +M+++ G L+D K G D N+ + + +
Sbjct: 168 ERIYRFVVTEF--EMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVS 225
Query: 199 CGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLI 258
G +D A +F +VV W M++GY + G+ P++ LV +
Sbjct: 226 TGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSL 285
Query: 259 LSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDV 318
L+ C++ L G +++ Y+ E V + V+ L+DM+ CG ++ A VF +K RD
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDT 345
Query: 319 ISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMS 378
SWTS++ G A G M R AL L+ EM+
Sbjct: 346 ASWTSLIYGLAMNG-----------MSGR--------------------ALDLYYEMENV 374
Query: 379 HVKPDEFTMVSILTACAHLGALELGEWV-KTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
V+ D T V++LTAC H G + G + + +++ + + S LID+ + G +++
Sbjct: 375 GVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDE 434
Query: 438 ARKTFKEMH 446
A + +M
Sbjct: 435 AEELIDKMR 443
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 129/287 (44%), Gaps = 8/287 (2%)
Query: 98 SGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFL 157
+G +D AR +F+ P V +W M+ GY + + + ++ M I+PD+F L
Sbjct: 226 TGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSL 285
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
L G AL+ GK + + + + + V A + +++ CG ++ A ++F +
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDT 345
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
+W ++ G GV +++T V +L+AC+ +A G ++
Sbjct: 346 ASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHS 405
Query: 278 LTEG-IVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD----VISWTSIVSGFANTG 332
+TE V+P + L+D+ G +D A+ + D M+ V + S++S N G
Sbjct: 406 MTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYG 465
Query: 333 QIDLARKYFDQMPE---RDYVSWTAMIDGYLRMNHFREALALFREMQ 376
+ +A + +++ + D + T + Y N + + + R+M+
Sbjct: 466 NVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMK 512
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/687 (31%), Positives = 358/687 (52%), Gaps = 36/687 (5%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K++H ++ G D N +I + GDV AR +FD +P + WN MI GY
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYV--KCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
G+ ++ M ++ PD T ++ + G+ + + + G ++
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V + ++ G A K+F+ + ++V+W M+SGY
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
V P+ +T+ +LSAC+ L DL G +++ + + +++ N L++M+ C +D A
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
+F N+ P ++ +SWT++I G N E
Sbjct: 454 DIFHNI-------------------------------PRKNVISWTSIIAGLRLNNRCFE 482
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
AL R+M+M+ ++P+ T+ + L ACA +GAL G+ + ++ + + D F+ +AL+D
Sbjct: 483 ALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLD 541
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
MY +CG + A F +KD W ++ G + G G + +F M++S + PD+IT
Sbjct: 542 MYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEIT 600
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
+I +L C+ + MV +G +F+ M +G+ PN+ HY C+VDLL RAG L+EA I M
Sbjct: 601 FISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM 659
Query: 548 PVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLR 607
PV P+ VWG+LL ACR+H ++L E++A+ I EL+ ++ Y+LLCN+YA C +W +
Sbjct: 660 PVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVA 719
Query: 608 EVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSP 667
+VR +M E G+ GCS +E+ G ++ F++ D+ HPQ+KEI LE + ++ G +
Sbjct: 720 KVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTK 779
Query: 668 DTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVS 727
+ +D E ++ HSE+ AIA+ LI++ PG+ I + KNL MC +CH K +S
Sbjct: 780 ISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFIS 839
Query: 728 KAYNRELVVRDKTRFHHFRHGVCSCNN 754
K RE+ VRD FHHF+ G CSC +
Sbjct: 840 KTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 212/443 (47%), Gaps = 34/443 (7%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLML-AHNIKPDSFTFPFL 157
G++ A VF + ++F WN ++ GY++ + +Y ML +KPD +TFP +
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
L+ L GK + H V+ G + ++ V A I ++ CG V A +F+ ++
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
++WN M+SGY V P+ +TL ++SAC L D G ++ Y
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
+ ++ + N L M+ G A+ +F M+ +D++SWT+++SG+
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE-------- 374
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
++ +P++ A+ +R M VKPDE T+ ++L+ACA L
Sbjct: 375 ---YNFLPDK--------------------AIDTYRMMDQDSVKPDEITVAAVLSACATL 411
Query: 398 GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMI 457
G L+ G + K ++ + + + LI+MY KC ++KA F + +K+ WT++I
Sbjct: 412 GDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII 471
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
GL +N EAL +F ++ ++ P+ IT L+AC G + G++ A + ++ G+
Sbjct: 472 AGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHV-LRTGV 529
Query: 518 KPNVTHYGCMVDLLSRAGHLKEA 540
+ ++D+ R G + A
Sbjct: 530 GLDDFLPNALLDMYVRCGRMNTA 552
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 191/413 (46%), Gaps = 37/413 (8%)
Query: 176 HAVKLGLDSNLFVQ--KAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXX 233
+++ L S+L V+ AF+ +F G + A +F + +WNV++ GY +
Sbjct: 117 YSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYF 176
Query: 234 XXXXXXXXXXX-XXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENV 292
GV P+ T +L C + DLA G V+ ++ E ++ + N
Sbjct: 177 DEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNA 236
Query: 293 LLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSW 352
L+ M+ CG++ +A+ +FD M RD+ISW +++SG+ G
Sbjct: 237 LITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG-------------------- 276
Query: 353 TAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 412
M H E L LF M+ V PD T+ S+++AC LG LG + Y+
Sbjct: 277 ---------MCH--EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVIT 325
Query: 413 NKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTM 472
D + ++L MY G+ +A K F M +KD WT MI G N ++A+
Sbjct: 326 TGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDT 385
Query: 473 FSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLS 532
+ M + S+ PD+IT VLSAC G ++ G + + I+ + V ++++ S
Sbjct: 386 YRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH-KLAIKARLISYVIVANNLINMYS 444
Query: 533 RAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQI-IELEP 584
+ + +ALD+ N+P K N I W S++ R++ A + +Q+ + L+P
Sbjct: 445 KCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQP 496
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 120/255 (47%), Gaps = 17/255 (6%)
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSA 424
EA+ L MQ V DE V+++ C A E G V + + + +G+A
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 425 LIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI-ESSITP 483
+ M+ + GN+ A F +M +++ F W ++ G A G+ +EA+ ++ M+ + P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 484 DDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV 543
D T+ VL C + +G++ + +++G + ++ ++ + + G +K A +
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHV-VRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 544 ILNMPVKPNSIVWGSLL------GACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIY 597
MP + + I W +++ G C H+ +EL A + + ++P+ + L ++
Sbjct: 254 FDRMP-RRDIISWNAMISGYFENGMC--HEGLEL--FFAMRGLSVDPD----LMTLTSVI 304
Query: 598 AACKRWENLREVRTI 612
+AC+ + R R I
Sbjct: 305 SACELLGDRRLGRDI 319
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/576 (35%), Positives = 315/576 (54%), Gaps = 25/576 (4%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCT-QESGDVDYARQVFDTIPH 113
+S LE C+S +L Q+H IK + + + +++I FC T E+ ++ YAR VF++I
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
PSV+IWN+MI+GYS P + Y ML PD FTFP++LK + +++G +
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXX 233
VK G + N++V +H++ CG V+ ++F W VV W ++SG+
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 234 XXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVL 293
GV N +V +L AC + D+ G + + +L +P
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDP-------- 241
Query: 294 LDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWT 353
F + +VI TS++ +A G + AR FD MPER VSW
Sbjct: 242 ---------------YFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWN 286
Query: 354 AMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 413
++I GY + EAL +F +M + PD+ T +S++ A G +LG+ + Y+ K
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMF 473
D I AL++MY K G+ E A+K F+++ +KD WT +I+GLA +GHG EAL++F
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 474 SNMIE-SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLS 532
M E + TPD ITY+GVL AC+H G+VE+G+++FA M HG++P V HYGCMVD+LS
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILS 466
Query: 533 RAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVL 592
RAG +EA ++ MPVKPN +WG+LL C +H+N+EL + + E E +YVL
Sbjct: 467 RAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVL 526
Query: 593 LCNIYAACKRWENLREVRTIMMERGIKKTPGCSLME 628
L NIYA RW +++ +R M + + K G S +E
Sbjct: 527 LSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 324/579 (55%), Gaps = 31/579 (5%)
Query: 178 VKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXX 237
+++ L+ ++ + I+ +S CG V+LA ++F+ +V+WN M+ Y R
Sbjct: 88 IRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEAL 147
Query: 238 XXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMF 297
G + T+ +LSAC D ++ + ++ NL + LLD++
Sbjct: 148 DIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLY 207
Query: 298 GACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMID 357
CG I A + F+ M ++ V+W++M+
Sbjct: 208 AKCG-------------------------------MIKDAVQVFESMQDKSSVTWSSMVA 236
Query: 358 GYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINN 417
GY++ ++ EAL L+R Q ++ ++FT+ S++ AC++L AL G+ + I K+ +
Sbjct: 237 GYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS 296
Query: 418 DTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI 477
+ F+ S+ +DMY KCG++ ++ F E+ +K+ +W +I G A + +E + +F M
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 478 ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL 537
+ + P+++T+ +LS C H G+VE+GR+FF M +G+ PNV HY CMVD+L RAG L
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 416
Query: 538 KEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIY 597
EA ++I ++P P + +WGSLL +CRV+KN+ELAE+AA+++ ELEPEN +VLL NIY
Sbjct: 417 SEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIY 476
Query: 598 AACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMM 657
AA K+WE + + R ++ + +KK G S +++ ++ F G+ HP+ +EI + L+N++
Sbjct: 477 AANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLV 536
Query: 658 QDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCV 717
GY P D+ KE L +HSEKLA+ + L+ +RI+KNLR+CV
Sbjct: 537 IKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICV 596
Query: 718 DCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
DCH+ K S A R ++VRD RFHHF G CSC +FW
Sbjct: 597 DCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 174/410 (42%), Gaps = 35/410 (8%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
+ L R + + K H K I++ L D N +I + G V+ ARQVFD +
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLIN--AYSKCGFVELARQVFDGMLER 125
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLL 174
S+ WNTMI Y+R + ++L M K FT +L + K L
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXX 234
+VK +D NL+V A + L++ CG++ A ++F VTW+ M++GY +
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 235 XXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLL 294
+ N TL ++ ACS L L G ++ + + N+ + + +
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 295 DMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTA 354
DM+ CG + + +F ++ +++ W +I+SGFA + P
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR-----------P--------- 345
Query: 355 MIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKN 413
+E + LF +MQ + P+E T S+L+ C H G +E G + K
Sbjct: 346 -----------KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAI 462
++ + S ++D+ + G + +A + K + IW +++ +
Sbjct: 395 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRV 444
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 131/289 (45%), Gaps = 12/289 (4%)
Query: 66 QLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
+ K++H ++K + + G ++ + G + A QVF+++ S W++M+ G
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDL--YAKCGMIKDAVQVFESMQDKSSVTWSSMVAG 237
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAV--KLGLD 183
Y + + + +Y +++ + FT ++ +N AL GK + HAV K G
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM--HAVICKSGFG 295
Query: 184 SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXX 243
SN+FV + + +++ CG + ++ IF+ + WN ++SG+ +
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355
Query: 244 XXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL-TEGIVEPNLVMENVLLDMFGACGE 302
G+ PN VT +LS C + G ++ + T + PN+V + ++D+ G G
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 415
Query: 303 MDAAKGVFDNMKTRDVIS-WTSIVSGFANTGQIDL----ARKYFDQMPE 346
+ A + ++ S W S+++ ++L A K F+ PE
Sbjct: 416 LSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPE 464
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 34/298 (11%)
Query: 390 ILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKD 449
IL CA GA+ + I + + D + + LI+ Y KCG VE AR+ F M ++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 450 KFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFA 509
W MI N EAL +F M + T VLSAC + +K
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 510 SMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNV 569
++++ I N+ ++DL ++ G +K+A+ V +M K +S+ W S++ +KN
Sbjct: 187 -LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK-SSVTWSSMVAGYVQNKNY 244
Query: 570 ELAEMAAK--QIIELEPENGSVYVLLCNIYAACKRWENL---REVRTIMMERG------- 617
E A + + Q + LE ++ ++C AC L +++ ++ + G
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVIC----ACSNLAALIEGKQMHAVICKSGFGSNVFV 300
Query: 618 ----IKKTPGCSLMEMNGIIYE------------FVAGDQSHPQSKEIYAKLENMMQD 659
+ C + + II+ ++G H + KE+ E M QD
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 358
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/595 (36%), Positives = 324/595 (54%), Gaps = 43/595 (7%)
Query: 174 LDHAVKL--------GLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVT---WNV 222
L H +K+ L N + I LFS+C +DLA KIF+ ++T W
Sbjct: 147 LHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAA 206
Query: 223 MLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI 282
M GY+R + P + ++ + L AC L DL G ++ + +
Sbjct: 207 MAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRK 266
Query: 283 VEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFD 342
+ + V+ NVLL ++ G+FD+ ARK FD
Sbjct: 267 EKVDQVVYNVLLKLY-------MESGLFDD------------------------ARKVFD 295
Query: 343 QMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALEL 402
M ER+ V+W ++I + E LFR+MQ + T+ +IL AC+ + AL
Sbjct: 296 GMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLT 355
Query: 403 GEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAI 462
G+ + I K+K D + ++L+DMY KCG VE +R+ F M KD W M+ AI
Sbjct: 356 GKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAI 415
Query: 463 NGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVT 522
NG+ EE + +F MIES + PD IT++ +LS C+ G+ E G F M + + P +
Sbjct: 416 NGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALE 475
Query: 523 HYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIEL 582
HY C+VD+L RAG +KEA+ VI MP KP++ +WGSLL +CR+H NV + E+AAK++ L
Sbjct: 476 HYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVL 535
Query: 583 EPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQS 642
EP N YV++ NIYA K W+N+ ++R +M +RG+KK GCS +++ I FVAG
Sbjct: 536 EPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGY 595
Query: 643 HPQSKEIYAKLENMMQD-LTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISS 701
++ + Y K+ +Q+ + +GYSP+TS V D+ EE K + HSE+LA Y+LI +
Sbjct: 596 EFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHT 655
Query: 702 GPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
G GV IRI KNLR+C DCH K+VS+ R +V+RD RFHHF G+CSC ++W
Sbjct: 656 GEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 170/373 (45%), Gaps = 42/373 (11%)
Query: 101 VDYARQVFDTIPHPSVF---IWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFL 157
+D AR++FD + S+ +W M GYSR P+ + +Y+ ML I+P +F+
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVA 242
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
LK + L+ G+ + VK + V + L+ GL D A K+F+ V
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
VTWN ++S ++ + + TL IL ACS++ L G ++
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
+ + +P++ + N L+DM+G CGE++ ++ VFD M T+D+ SW +++ +A G I+
Sbjct: 363 ILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIE-- 420
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
E + LF M S V PD T V++L+ C+
Sbjct: 421 -----------------------------EVINLFEWMIESGVAPDGITFVALLSGCSDT 451
Query: 398 GALELG----EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-DKFI 452
G E G E +KT +++ + L+D+ + G +++A K + M K I
Sbjct: 452 GLTEYGLSLFERMKTEF---RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASI 508
Query: 453 WTAMIVGLAINGH 465
W +++ ++G+
Sbjct: 509 WGSLLNSCRLHGN 521
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 10/285 (3%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+ IH++ +K D V N ++ ESG D AR+VFD + +V WN++I S
Sbjct: 256 RGIHAQIVKRKEKVDQVVYNVLLKL--YMESGLFDDARKVFDGMSERNVVTWNSLISVLS 313
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ +++ M I T +L + AL GK + +K ++
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP 373
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+ + + ++ CG V+ + ++F++ ++ +WN+ML+ Y G
Sbjct: 374 LLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG 433
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYL-TEGIVEPNLVMENVLLDMFGACGEMDAA 306
V+P+ +T V +LS CS G +++ + TE V P L L+D+ G G++ A
Sbjct: 434 VAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEA 493
Query: 307 KGVFDNMKTRDVIS-WTSIVS-----GFANTGQIDLARKYFDQMP 345
V + M + S W S+++ G + G+I A++ F P
Sbjct: 494 VKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEI-AAKELFVLEP 537
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 10/159 (6%)
Query: 53 TPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
T ++L C L K+IH++ +K D N ++ + G+V+Y+R+VFD
Sbjct: 339 TLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDM--YGKCGEVEYSRRVFD 396
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+ + WN M+ Y+ + I+++ M+ + PD TF LL G ++ +Y
Sbjct: 397 VMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEY 456
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKI 208
G L + + + V A H L ++ A KI
Sbjct: 457 GLSLFER-----MKTEFRVSPALEHYACLVDILGRAGKI 490
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/613 (35%), Positives = 347/613 (56%), Gaps = 15/613 (2%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVF-DTIPHPS 115
LLE C S Q KQ+ ++ ++ L D +++I F ++D A+ +F + P+P+
Sbjct: 40 LLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPN 99
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG--FTNDMALKYGKVL 173
VF++NTMI S S +Y M+ H + PD TF +L+K F +++ + ++
Sbjct: 100 VFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHCHII 157
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXX 233
+ + LG ++ + + + G +A K+F +V ++NVM+ GY +
Sbjct: 158 VSGCLSLGN----YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFS 213
Query: 234 XXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE--GIVEPNLVMEN 291
G+ P+ T++ +L C L+D+ G V+ ++ + NL++ N
Sbjct: 214 LEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSN 273
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
LLDM+ C E AK FD MK +D+ SW ++V GF G ++ A+ FDQMP+RD VS
Sbjct: 274 ALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVS 333
Query: 352 WTAMIDGYLRMN-HFREALALFREMQM-SHVKPDEFTMVSILTACAHLGALELGEWVKTY 409
W +++ GY + R LF EM + VKPD TMVS+++ A+ G L G WV
Sbjct: 334 WNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGL 393
Query: 410 IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEA 469
+ + ++ D F+ SALIDMY KCG +E+A FK +KD +WT+MI GLA +G+G++A
Sbjct: 394 VIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVD 529
L +F M E +TP+++T + VL+AC+H+G+VE+G F M + G P HYG +VD
Sbjct: 454 LQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVD 513
Query: 530 LLSRAGHLKEALDVIL-NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGS 588
LL RAG ++EA D++ MP++P+ +WGS+L ACR +++E AE+A ++++LEPE
Sbjct: 514 LLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEG 573
Query: 589 VYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGD-QSHPQSK 647
YVLL NIYA RW + R M RG+KKT G S + ++ FVA + Q+HP+
Sbjct: 574 GYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWT 633
Query: 648 EIYAKLENMMQDL 660
EI L+++ ++
Sbjct: 634 EIKRILQHLYNEM 646
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/765 (29%), Positives = 391/765 (51%), Gaps = 83/765 (10%)
Query: 70 IHSKTIKMGL-SSDPVFGNKVIAF---CCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
IH IK GL +SD + + F C + + +A ++FD +P WN ++
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVS-----LGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
R + + ++ M K T LL+ +N G+ + + ++LGL+SN
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFN-MGD----AW------------------------- 215
+ + + I ++S G ++L+ K+FN M D +W
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 216 -----EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAG 270
++VTWN +LSGY G+ P++ ++ +L A ++ L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 271 GNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSG--- 327
G ++ Y+ + ++ +E L+DM+ G + A+ VFD M +++++W S+VSG
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 328 --------------------------------FANTGQIDLARKYFDQMPER----DYVS 351
+A G+ + A +M E+ + VS
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
WTA+ G + +FR AL +F +MQ V P+ TM ++L L L G+ V +
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
+ + D ++ +AL+DMY K G+++ A + F + K W M++G A+ G GEE +
Sbjct: 424 RKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIA 483
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
FS M+E+ + PD IT+ VLS C ++G+V++G K+F M ++GI P + H CMVDLL
Sbjct: 484 AFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLL 543
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYV 591
R+G+L EA D I M +KP++ +WG+ L +C++H+++ELAE+A K++ LEP N + Y+
Sbjct: 544 GRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYM 603
Query: 592 LLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYA 651
++ N+Y+ RWE++ +R +M ++ S ++++ ++ F A ++HP +IY
Sbjct: 604 MMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYF 663
Query: 652 KLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVK 711
+L ++ ++ +GY PDTS + DI + +KE L H+EKLA+ Y LI IR+VK
Sbjct: 664 ELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVK 723
Query: 712 NLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
N +C D H +AK +S NRE+V+++ R HHFR G CSCN+ W
Sbjct: 724 NTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/684 (34%), Positives = 354/684 (51%), Gaps = 47/684 (6%)
Query: 84 VFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLML 143
VF VI ++S + ARQ+FD IP P +NT+I GY+ + + ++ M
Sbjct: 74 VFSYNVIVKAYAKDS-KIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 144 AHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVD 203
+ D FT L+ + + L K L +V G DS V AF+ +S GL+
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 204 LAHKIF-NMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSAC 262
A +F M + + V+WN M+ Y + G + TL +L+A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 263 SKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWT 322
+ L L GG + L + N + + L+D + CG D G++D
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCD---GMYD----------- 296
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH--FREALALFREMQMSHV 380
+ K F ++ D V W MI GY MN EA+ FR+MQ
Sbjct: 297 --------------SEKVFQEILSPDLVVWNTMISGY-SMNEELSEEAVKSFRQMQRIGH 341
Query: 381 KPDEFTMVSILTACAHLGALEL-----GEWVKTYIDKNKINNDTFIGSALIDMYFKCGNV 435
+PD+ + V + +AC++L + G +K++I N+I+ + +ALI +Y+K GN+
Sbjct: 342 RPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS----VNNALISLYYKSGNL 397
Query: 436 EKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSAC 495
+ AR F M + + + MI G A +GHG EAL ++ M++S I P+ IT++ VLSAC
Sbjct: 398 QDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSAC 457
Query: 496 THAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIV 555
H G V++G+++F +M I+P HY CM+DLL RAG L+EA I MP KP S+
Sbjct: 458 AHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVA 517
Query: 556 WGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMME 615
W +LLGACR HKN+ LAE AA +++ ++P + YV+L N+YA ++WE + VR M
Sbjct: 518 WAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRG 577
Query: 616 RGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLD 675
+ I+K PGCS +E+ + FVA D SHP +E+ LE MM+ + GY D +
Sbjct: 578 KRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVK 637
Query: 676 IGEEDKETALFR---HSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNR 732
E + R HSEKLA+A+ L+S+ G + +VKNLR+C DCH K +S R
Sbjct: 638 EDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGR 697
Query: 733 ELVVRDKTRFHHFRHGVCSCNNFW 756
E++VRD RFH F+ G CSC ++W
Sbjct: 698 EIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 154/321 (47%), Gaps = 10/321 (3%)
Query: 267 DLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVS 326
DL G ++ + IV + + N ++++ CG + A+ F + + +V S+ IV
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 327 GFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
+A +I +AR+ FD++P+ D VS+ +I GY A+ LF+ M+ + D FT
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 387 MVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH 446
+ ++ AC ++L + + + ++ + + +A + Y K G + +A F M
Sbjct: 143 LSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 447 Q-KDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGR 505
+ +D+ W +MIV + G +AL ++ MI D T VL+A T + GR
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 506 KFFASMTIQHGIKPNVTHYGC-MVDLLSRAGHLKEALDV--ILNMPVKPNSIVWGSLLGA 562
+F + I+ G N +H G ++D S+ G D + + P+ +VW +++
Sbjct: 261 QFHGKL-IKAGFHQN-SHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 563 CRVHKNVELAEMAAKQIIELE 583
+ N EL+E A K +++
Sbjct: 319 YSM--NEELSEEAVKSFRQMQ 337
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/711 (31%), Positives = 358/711 (50%), Gaps = 46/711 (6%)
Query: 53 TPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCT-----QESGDVDYARQV 107
T +S+L + IH +KMG S V+ C T +G A V
Sbjct: 266 TLLSVLGHVDHQKWGRGIHGLVVKMGFDS-------VVCVCNTLLRMYAGAGRSVEANLV 318
Query: 108 FDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG-FTNDMA 166
F +P + WN+++ + + + M++ + TF L FT D
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF- 377
Query: 167 LKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG 226
+ G++L V GL N + A + ++ G + + ++ +VV WN ++ G
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDL-AGGNYVYQYLTEGIVEP 285
Y GVS N +T+V +LSAC DL G ++ Y+ E
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMP 345
+ ++N L+ M+ CG++ +++ DL F+ +
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQ---------------------------DL----FNGLD 526
Query: 346 ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEW 405
R+ ++W AM+ H E L L +M+ V D+F+ L+A A L LE G+
Sbjct: 527 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 586
Query: 406 VKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGH 465
+ K +D+FI +A DMY KCG + + K + W +I L +G+
Sbjct: 587 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 646
Query: 466 GEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYG 525
EE F M+E I P +T++ +L+AC+H G+V+KG ++ + G++P + H
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 706
Query: 526 CMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPE 585
C++DLL R+G L EA I MP+KPN +VW SLL +C++H N++ AA+ + +LEPE
Sbjct: 707 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 766
Query: 586 NGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQ 645
+ SVYVL N++A RWE++ VR M + IKK CS +++ + F GD++HPQ
Sbjct: 767 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 826
Query: 646 SKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGV 705
+ EIYAKLE++ + + +GY DTS+ D EE KE L+ HSE+LA+AYAL+S+ G
Sbjct: 827 TMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGS 886
Query: 706 TIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
T+RI KNLR+C DCH + K VS+ R +V+RD+ RFHHF G+CSC ++W
Sbjct: 887 TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 227/504 (45%), Gaps = 38/504 (7%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
G V AR +FD +P + WNTM+ G R+ G+ + M IKP SF L+
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 159 K--GFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
G + M + G + K GL S+++V A +HL+ + GLV + K+F
Sbjct: 66 TACGRSGSM-FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 124
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
VV+W ++ GY+ GV N ++ L++S+C L D + G +
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 184
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDL 336
+ + +E L +EN L+ M G+ G +D A +FD M RD ISW SI + +A G
Sbjct: 185 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG---- 240
Query: 337 ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAH 396
H E+ +F M+ H + + T+ ++L+ H
Sbjct: 241 ---------------------------HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 397 LGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAM 456
+ + G + + K ++ + + L+ MY G +A FK+M KD W ++
Sbjct: 274 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 333
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
+ +G +AL + +MI S + + +T+ L+AC EKGR + + G
Sbjct: 334 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSG 392
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAA 576
+ N +V + + G + E+ V+L MP + + + W +L+G ++ + A +AA
Sbjct: 393 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKA-LAA 450
Query: 577 KQIIELEPENGSVYVLLCNIYAAC 600
Q + +E + S Y+ + ++ +AC
Sbjct: 451 FQTMRVEGVS-SNYITVVSVLSAC 473
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/536 (24%), Positives = 235/536 (43%), Gaps = 42/536 (7%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+QI + +K GL S N +I+ + G+VDYA +FD + WN++ Y+
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSM--GNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ + ++ LM + + +S T LL + K+G+ + VK+G DS +
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V + +++ G A+ +F ++++WN +++ + G
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
S N VT L+AC G ++ + + N ++ N L+ M+G GEM +
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES- 416
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
R+ QMP RD V+W A+I GY +
Sbjct: 417 ------------------------------RRVLLQMPRRDVVAWNALIGGYAEDEDPDK 446
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLG-ALELGEWVKTYIDKNKINNDTFIGSALI 426
ALA F+ M++ V + T+VS+L+AC G LE G+ + YI +D + ++LI
Sbjct: 447 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLI 506
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
MY KCG++ ++ F + ++ W AM+ A +GHGEE L + S M ++ D
Sbjct: 507 TMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQF 566
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
++ LSA ++E+G++ + ++ G + + + D+ S+ G + E V+
Sbjct: 567 SFSEGLSAAAKLAVLEEGQQLHG-LAVKLGFEHDSFIFNAAADMYSKCGEIGE---VVKM 622
Query: 547 MPVKPNSIV--WGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAAC 600
+P N + W L+ A H E +++E+ + G +V ++ AC
Sbjct: 623 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG--HVTFVSLLTAC 676
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 160/368 (43%), Gaps = 32/368 (8%)
Query: 195 LFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVT 254
+++ G V A +F++ V+WN M+SG RV G+ P+S
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 255 LVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMK 314
+ +++AC + + EG+ V ++ LL
Sbjct: 61 IASLVTACGRSGSM---------FREGVQVHGFVAKSGLLS------------------- 92
Query: 315 TRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFRE 374
DV T+I+ + G + +RK F++MP+R+ VSWT+++ GY E + +++
Sbjct: 93 --DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKG 150
Query: 375 MQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGN 434
M+ V +E +M ++++C L LG + + K+ + + + ++LI M GN
Sbjct: 151 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 210
Query: 435 VEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSA 494
V+ A F +M ++D W ++ A NGH EE+ +FS M + T +LS
Sbjct: 211 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 270
Query: 495 CTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSI 554
H + GR + ++ G V ++ + + AG EA V MP K + I
Sbjct: 271 LGHVDHQKWGRGIHG-LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLI 328
Query: 555 VWGSLLGA 562
W SL+ +
Sbjct: 329 SWNSLMAS 336
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/707 (30%), Positives = 368/707 (52%), Gaps = 79/707 (11%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
ISL+ CK T L+ +H++ ++ G+ S V V C+ DY+ +F
Sbjct: 33 ISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLV---SCSSLLKSPDYSLSIFRNSEER 89
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY-GKVL 173
+ F+ N +I+G + + +S + ++LML +KPD TFPF+LK + + ++ G+ L
Sbjct: 90 NPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKS-NSKLGFRWLGRAL 148
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMG----DAWEVVTWNVMLSGYNR 229
+K +D + FV+ + + +++ G + A ++F ++ WNV+++GY R
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR 208
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
A ++ L + E N
Sbjct: 209 ---------------------------------------AKDMHMATTLFRSMPERNSGS 229
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY 349
+ L+ + GE++ AK +F+ M ++V+SWT++++GF+ TG
Sbjct: 230 WSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGD---------------- 273
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTY 409
+ A++ + EM +KP+E+T+ ++L+AC+ GAL G + Y
Sbjct: 274 ---------------YETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGY 318
Query: 410 IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEA 469
I N I D IG+AL+DMY KCG ++ A F M+ KD WTAMI G A++G +A
Sbjct: 319 ILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQA 378
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVD 529
+ F M+ S PD++ ++ VL+AC ++ V+ G FF SM + + I+P + HY +VD
Sbjct: 379 IQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVD 438
Query: 530 LLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSV 589
LL RAG L EA +++ NMP+ P+ W +L AC+ HK AE ++ ++EL+PE
Sbjct: 439 LLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGS 498
Query: 590 YVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEI 649
Y+ L +A+ +++ + R + +R +++ G S +E++G + +F AGD SH ++EI
Sbjct: 499 YIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEI 558
Query: 650 YAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRI 709
KL+ ++ GY+P DI EE+KE HSEKLA+ + + PG TIRI
Sbjct: 559 GLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRI 618
Query: 710 VKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+KNLR+C DCH + K VSK R++++RD +FHHF+ G CSC ++W
Sbjct: 619 IKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 19/284 (6%)
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVIS---WTSIVSGFANTGQIDLARKYFDQMPE 346
E+ + + AC + + + V + R V+S +VS + D + F E
Sbjct: 29 ESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEE 88
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
R+ A+I G F ++ F M VKPD T +L + + LG LG +
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDK----FIWTAMIVGLAI 462
KN ++ D+F+ +L+DMY K G ++ A + F+E + K IW +I G
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR 208
Query: 463 NGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVT 522
A T+F +M E + ++ ++ +G + + ++ F M + NV
Sbjct: 209 AKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMP-----EKNVV 259
Query: 523 HYGCMVDLLSRAGHLKEALDVILNM---PVKPNSIVWGSLLGAC 563
+ +++ S+ G + A+ M +KPN ++L AC
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/434 (41%), Positives = 275/434 (63%), Gaps = 4/434 (0%)
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM-QMSHVKP 382
I+ G+ LA+K +++ ++W MI GY+R + EAL + M + +KP
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
++F+ S L ACA LG L +WV + + + I + + SAL+D+Y KCG++ +R+ F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVE 502
+ + D IW AMI G A +G EA+ +FS M ++PD IT++G+L+ C+H G++E
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 503 KGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
+G+++F M+ + I+P + HYG MVDLL RAG +KEA ++I +MP++P+ ++W SLL +
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 563 CRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTP 622
R +KN EL E+A I L YVLL NIY++ K+WE+ ++VR +M + GI+K
Sbjct: 344 SRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAK 400
Query: 623 GCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKE 682
G S +E G+I+ F AGD SH ++K IY LE ++Q + G+ DT V +D+ EE+KE
Sbjct: 401 GKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKE 460
Query: 683 TALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRF 742
L HSEKLA+AY ++ S PG IRI KN+RMC DCH K VSK NR +++RD+ RF
Sbjct: 461 ENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRF 520
Query: 743 HHFRHGVCSCNNFW 756
H F G+CSC ++W
Sbjct: 521 HRFEDGLCSCRDYW 534
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 143/332 (43%), Gaps = 35/332 (10%)
Query: 200 GLVDLAHKIFNMGDAWEVVTWNVMLSGYNR-VXXXXXXXXXXXXXXXXGVSPNSVTLVLI 258
G LA K+ V+TWN+M+ GY R V + PN +
Sbjct: 112 GESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASS 171
Query: 259 LSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDV 318
L+AC++L DL +V+ + + +E N ++ + L+D++ CG++ ++ VF ++K DV
Sbjct: 172 LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDV 231
Query: 319 ISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMS 378
W ++++GFA G LA EA+ +F EM+
Sbjct: 232 SIWNAMITGFATHG---LA----------------------------TEAIRVFSEMEAE 260
Query: 379 HVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
HV PD T + +LT C+H G LE G E+ + I A++D+ + G V++
Sbjct: 261 HVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKE 320
Query: 438 ARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACT 496
A + + M + D IW +++ + E N+ ++ + D + + S+
Sbjct: 321 AYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAK-SGDYVLLSNIYSSTK 379
Query: 497 HAGMVEKGRKFFASMTIQHGIKPNVTHYGCMV 528
+K R+ + I+ + +G M+
Sbjct: 380 KWESAQKVRELMSKEGIRKAKGKSWLEFGGMI 411
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 129/304 (42%), Gaps = 10/304 (3%)
Query: 53 TPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
+ ++ RC +Y +++ + LS P N + + G+ A++V
Sbjct: 70 STVAAYRRCNRSYLARRL----LLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNAS 125
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAH-NIKPDSFTFPFLLKGFTNDMALKYGK 171
+V WN MI GY R + + ML+ +IKP+ F+F L L + K
Sbjct: 126 DQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAK 185
Query: 172 VLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVX 231
+ + G++ N + A + +++ CG + + ++F +V WN M++G+
Sbjct: 186 WVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHG 245
Query: 232 XXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEPNLVME 290
VSP+S+T + +L+ CS L G + ++ ++P L
Sbjct: 246 LATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY 305
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSG---FANTGQIDLARKYFDQMPE 346
++D+ G G + A + ++M DV+ W S++S + N ++A + +
Sbjct: 306 GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKS 365
Query: 347 RDYV 350
DYV
Sbjct: 366 GDYV 369
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 330/600 (55%), Gaps = 32/600 (5%)
Query: 147 IKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAH 206
I D + LLK T L G+++ H ++ ++ + +++++ CG ++ A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 207 KIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLT 266
K+F + VTW ++SGY++ G SPN TL ++ A +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 267 DLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVS 326
G+ ++ + + + N+ + + LLD++ G MD A+ VFD +++R+ +SW ++++
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 327 GFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
G A R + +AL LF+ M +P F+
Sbjct: 236 GHA-------------------------------RRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 387 MVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH 446
S+ AC+ G LE G+WV Y+ K+ F G+ L+DMY K G++ ARK F +
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 447 QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRK 506
++D W +++ A +G G+EA+ F M I P++I+++ VL+AC+H+G++++G
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 507 FFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
++ M + GI P HY +VDLL RAG L AL I MP++P + +W +LL ACR+H
Sbjct: 385 YYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 567 KNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSL 626
KN EL AA+ + EL+P++ +V+L NIYA+ RW + VR M E G+KK P CS
Sbjct: 444 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSW 503
Query: 627 MEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALF 686
+E+ I+ FVA D+ HPQ +EI K E ++ + GY PDTS V + + ++++E L
Sbjct: 504 VEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQ 563
Query: 687 RHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFR 746
HSEK+A+A+AL+++ PG TI I KN+R+C DCH KL SK RE++VRD RFHHF+
Sbjct: 564 YHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFK 623
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 196/434 (45%), Gaps = 39/434 (8%)
Query: 56 SLLERC---KSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
+LL++C K Q + +H+ ++ D V GN ++ + G ++ AR+VF+ +P
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYA--KCGSLEEARKVFEKMP 122
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
W T+I GYS+ P + + ML P+ FT ++K + G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
L VK G DSN+ V A + L++ GL+D A +F+ ++ V+WN +++G+ R
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENV 292
G P+ + + ACS L G +V+ Y+ + + N
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 293 LLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSW 352
LLDM+ G + A+ +FD + RDV+SW S+++ +A G
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG-------------------- 342
Query: 353 TAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 412
+EA+ F EM+ ++P+E + +S+LTAC+H G L+ G + K
Sbjct: 343 -----------FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 413 NKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEALT 471
+ I + + ++D+ + G++ +A + +EM + IW A++ ++ + E
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 451
Query: 472 MFSNMIESSITPDD 485
++ E + PDD
Sbjct: 452 AAEHVFE--LDPDD 463
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 374 EMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCG 433
+++ S++ D ++L C L G V +I ++ +D +G+ L++MY KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 434 NVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLS 493
++E+ARK F++M Q+D WT +I G + + +AL F+ M+ +P++ T V+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 494 ACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNS 553
A G + ++ G NV ++DL +R G + +A ++ + N
Sbjct: 170 AAAAERRGCCGHQLHG-FCVKCGFDSNVHVGSALLDLYTRYGLMDDA-QLVFDALESRND 227
Query: 554 IVWGSLLGA 562
+ W +L+
Sbjct: 228 VSWNALIAG 236
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/654 (32%), Positives = 352/654 (53%), Gaps = 33/654 (5%)
Query: 104 ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN 163
AR+VFD + +NTMI GY ++ + + M+L L KPD T +L+ +
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH 319
Query: 164 DMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVM 223
L K + ++ +K G V+ I +++ CG + A +FN + + V+WN +
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 224 LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIV 283
+SGY + + +T ++++S ++L DL G ++ + +
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQ 343
+L + N L+DM+ CGE+ + +F +M TG
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSM----------------GTG----------- 472
Query: 344 MPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG 403
D V+W +I +R F L + +M+ S V PD T + L CA L A LG
Sbjct: 473 ----DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLG 528
Query: 404 EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAIN 463
+ + + + ++ IG+ALI+MY KCG +E + + F+ M ++D WT MI +
Sbjct: 529 KEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMY 588
Query: 464 GHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTH 523
G GE+AL F++M +S I PD + +I ++ AC+H+G+V++G F M + I P + H
Sbjct: 589 GEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEH 648
Query: 524 YGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELE 583
Y C+VDLLSR+ + +A + I MP+KP++ +W S+L ACR ++E AE +++IIEL
Sbjct: 649 YACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN 708
Query: 584 PENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSH 643
P++ +L N YAA ++W+ + +R + ++ I K PG S +E+ ++ F +GD S
Sbjct: 709 PDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSA 768
Query: 644 PQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALF-RHSEKLAIAYALISSG 702
PQS+ IY LE + + GY PD EV ++ EE+++ L HSE+LAIA+ L+++
Sbjct: 769 PQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTE 828
Query: 703 PGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
PG ++++KNLR+C DCH++ KL+SK RE++VRD RFH F+ G CSC + W
Sbjct: 829 PGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 183 bits (464), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 238/500 (47%), Gaps = 39/500 (7%)
Query: 66 QLKQIHSKTIKMGLSSDPVFGNKVI-AFCCTQESGDVDYARQVFDTI-PHPSVFIWNTMI 123
+L++IH+ I +GL S F K+I + +E + VF + P +V++WN++I
Sbjct: 22 ELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPAS---SLSVFRRVSPAKNVYLWNSII 78
Query: 124 KGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLD 183
+ +S+ + Y + + PD +TFP ++K + G ++ + + +G +
Sbjct: 79 RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE 138
Query: 184 SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXX 243
S+LFV A + ++S GL+ A ++F+ ++V+WN ++SGY+
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 244 XXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEM 303
+ P+S T+ +L A L + G ++ + + V +V+ N L+ M+
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 304 DAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMN 363
A+ VFD M RD +S+ + MI GYL++
Sbjct: 259 TDARRVFDEMDVRDSVSYNT-------------------------------MICGYLKLE 287
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
E++ +F E + KPD T+ S+L AC HL L L +++ Y+ K ++ + +
Sbjct: 288 MVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 346
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITP 483
LID+Y KCG++ AR F M KD W ++I G +G EA+ +F M+
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 406
Query: 484 DDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV 543
D ITY+ ++S T ++ G K S I+ GI +++ ++D+ ++ G + ++L +
Sbjct: 407 DHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 544 ILNMPVKPNSIVWGSLLGAC 563
+M +++ W +++ AC
Sbjct: 466 FSSMGTG-DTVTWNTVISAC 484
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 198/444 (44%), Gaps = 36/444 (8%)
Query: 155 PFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN-MGD 213
PF+ + ++ L + + + LGLDS+ F I +S + +F +
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 214 AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY 273
A V WN ++ +++ VSP+ T ++ AC+ L D G+
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 274 VYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQ 333
VY+ + + E +L + N L+DM+ + G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMY-------------------------------SRMGL 156
Query: 334 IDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA 393
+ AR+ FD+MP RD VSW ++I GY ++ EAL ++ E++ S + PD FT+ S+L A
Sbjct: 157 LTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Query: 394 CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIW 453
+L ++ G+ + + K+ +N+ + + L+ MY K AR+ F EM +D +
Sbjct: 217 FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY 276
Query: 454 TAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTI 513
MI G EE++ MF ++ PD +T VL AC H + + + M +
Sbjct: 277 NTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM-L 334
Query: 514 QHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL-GACRVHKNVELA 572
+ G T ++D+ ++ G + A DV +M K +++ W S++ G + +E
Sbjct: 335 KAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAM 393
Query: 573 EMAAKQIIELEPENGSVYVLLCNI 596
++ +I E + Y++L ++
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISV 417
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/627 (33%), Positives = 348/627 (55%), Gaps = 56/627 (8%)
Query: 52 ETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFC--CTQESGDVDYARQVFD 109
E + L +C + Q+KQ+H++ I+ L D K+I+ C Q + A +VF+
Sbjct: 20 EERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQ----TNLAVRVFN 75
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+ P+V + N++I+ +++ S P ++ M + D+FT+PFLLK + L
Sbjct: 76 QVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV 135
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDL--AHKIFNMGDAWEVVTWNVMLSGY 227
K++ +H KLGL S+++V A I +S CG + + A K+F + V+WN ML G
Sbjct: 136 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGG- 194
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
L +L D + L + + + +L
Sbjct: 195 -------------------------------LVKAGELRD-------ARRLFDEMPQRDL 216
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMP-- 345
+ N +LD + C EM A +F+ M R+ +SW+++V G++ G +++AR FD+MP
Sbjct: 217 ISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLP 276
Query: 346 ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEW 405
++ V+WT +I GY +EA L +M S +K D ++SIL AC G L LG
Sbjct: 277 AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMR 336
Query: 406 VKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGH 465
+ + + ++ + ++ ++ +AL+DMY KCGN++KA F ++ +KD W M+ GL ++GH
Sbjct: 337 IHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGH 396
Query: 466 GEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYG 525
G+EA+ +FS M I PD +T+I VL +C HAG++++G +F SM + + P V HYG
Sbjct: 397 GKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYG 456
Query: 526 CMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPE 585
C+VDLL R G LKEA+ V+ MP++PN ++WG+LLGACR+H V++A+ +++L+P
Sbjct: 457 CLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPC 516
Query: 586 NGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQ 645
+ Y LL NIYAA + WE + ++R+ M G++K G S +E+ I+EF D+SHP+
Sbjct: 517 DPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPK 576
Query: 646 SKEIYAKLENMMQDLTNAGYSPDTSEV 672
S +IY L ++++ PD E+
Sbjct: 577 SDQIYQMLGSLIE-------PPDPGEL 596
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/713 (31%), Positives = 364/713 (51%), Gaps = 44/713 (6%)
Query: 55 ISLLERCKS---TYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTI 111
+S+L C + Q Q+H +K G + + N +I C + Y +VFD++
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY--KVFDSM 67
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK 171
P +V W+ ++ G+ K +S++ M I P+ FTF LK AL+ G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 172 VLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVX 231
+ +K+G + + V + + ++S CG ++ A K+F +++WN M++G+
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 232 XXXXXXXXXXXXXXXGVS--PNSVTLVLILSACSKLTDLAGGNYVYQYLTE-GIVEP-NL 287
+ P+ TL +L ACS + G ++ +L G P +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER 347
+ L+D++ CG + +A+ FD +K + +ISW+S++ G+A G+
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE-------------- 293
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
F EA+ LF+ +Q + + D F + SI+ A L G+ ++
Sbjct: 294 -----------------FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQ 336
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGE 467
K +T + ++++DMY KCG V++A K F EM KD WT +I G +G G+
Sbjct: 337 ALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGK 396
Query: 468 EALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCM 527
+++ +F M+ +I PD++ Y+ VLSAC+H+GM+++G + F+ + HGIKP V HY C+
Sbjct: 397 KSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456
Query: 528 VDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENG 587
VDLL RAG LKEA +I MP+KPN +W +LL CRVH ++EL + K ++ ++ +N
Sbjct: 457 VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP 516
Query: 588 SVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSK 647
+ YV++ N+Y W R + +G+KK G S +E+ ++ F +G+ SHP +
Sbjct: 517 ANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTP 576
Query: 648 EIYAKLENMMQDLTNA-GYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSG---P 703
I L+ + L GY DI +E KE L HSEKLAI AL + G
Sbjct: 577 VIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQK 636
Query: 704 GVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
G TIR+ KNLR+CVDCH+ K +SK VVRD RFH F G CSC ++W
Sbjct: 637 GKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 150/319 (47%), Gaps = 44/319 (13%)
Query: 250 PNS-VTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKG 308
PN LV IL C++ G V+ YL + NL+ N L+DM+ C E A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 309 VFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREA 368
VFD+M R+V+SW++++SG G + + +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDL-------------------------------KGS 91
Query: 369 LALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDM 428
L+LF EM + P+EFT + L AC L ALE G + + K +G++L+DM
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 429 YFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSIT--PDDI 486
Y KCG + +A K F+ + + W AMI G G+G +AL F M E++I PD+
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 211
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIK--PNVTHYGCMVDLLSRAGHL---KEAL 541
T +L AC+ GM+ G++ + ++ G + T G +VDL + G+L ++A
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFL-VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 542 DVILNMPVKPNSIVWGSLL 560
D I + I W SL+
Sbjct: 271 DQI----KEKTMISWSSLI 285
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 386 TMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM 445
+VSIL C G + G V Y+ K+ + + LIDMY KC A K F M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 446 HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGR 505
+++ W+A++ G +NG + +L++FS M I P++ T+ L AC +EKG
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 506 KFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
+ ++ G + V +VD+ S+ G + EA V + V + I W +++
Sbjct: 128 QIHG-FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/659 (33%), Positives = 339/659 (51%), Gaps = 42/659 (6%)
Query: 104 ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNI------KPDSFTFPFL 157
AR++FD +P +V W M+KGY SG +L L ++ +P+ F +
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQ-----NSGFDFEVLKLFKSMFFSGESRPNEFVATVV 142
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
K +N ++ GK +K GL S+ FV+ ++++SLC A ++ + ++
Sbjct: 143 FKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDL 202
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
++ LSGY N++T + L S L DL V+
Sbjct: 203 SVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSR 262
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
+ + L++M+G CG++ A+ VFD+ +++ F NT
Sbjct: 263 MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNI---------FLNT------ 307
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
++D Y + F EAL LF +M V P+E+T +L + A L
Sbjct: 308 ----------------TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAEL 351
Query: 398 GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMI 457
L+ G+ + + K+ N +G+AL++MY K G++E ARK F M +D W MI
Sbjct: 352 SLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMI 411
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
G + +G G EAL F MI + P+ IT+IGVL AC+H G VE+G +F + + +
Sbjct: 412 SGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDV 471
Query: 518 KPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAK 577
+P++ HY C+V LLS+AG K+A D + P++ + + W +LL AC V +N L + A+
Sbjct: 472 QPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE 531
Query: 578 QIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFV 637
IE P + VYVLL NI+A + WE + +VR++M RG+KK PG S + + + F+
Sbjct: 532 YAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFL 591
Query: 638 AGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYA 697
A D HP+ IYAK++ +M + GYSPD + F D+ EE +E L HSEKLA+AY
Sbjct: 592 AEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYG 651
Query: 698 LISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
LI + + + KN+R+C DCH KL+SK R +V+RD RFHHF G CSC ++W
Sbjct: 652 LIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 175/430 (40%), Gaps = 46/430 (10%)
Query: 149 PDSFTFPF-------LLKGFTNDMALKYGKVLLDHAVKLGLDS---NLFVQKAFIHLFSL 198
P S PF LLK N L+ G+ + H + S + + + I+L+
Sbjct: 22 PKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVK 81
Query: 199 CGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVS-PNSVTLVL 257
C A K+F++ VV+W M+ GY G S PN +
Sbjct: 82 CRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATV 141
Query: 258 ILSACSKLTDLAGGNYVYQ-YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR 316
+ +CS + G + +L G++ V N L+ M+ C A V D++
Sbjct: 142 VFKSCSNSGRIEEGKQFHGCFLKYGLISHEFV-RNTLVYMYSLCSGNGEAIRVLDDL--- 197
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
P D +++ + GYL F+E L + R+
Sbjct: 198 ----------------------------PYCDLSVFSSALSGYLECGAFKEGLDVLRKTA 229
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
+ T +S L ++L L L V + + + N + ALI+MY KCG V
Sbjct: 230 NEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVL 289
Query: 437 KARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACT 496
A++ F + H ++ F+ T ++ + EEAL +FS M + P++ T+ +L++
Sbjct: 290 YAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIA 349
Query: 497 HAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVW 556
++++G + ++ G + +V +V++ +++G +++A M + + + W
Sbjct: 350 ELSLLKQG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTW 407
Query: 557 GSLLGACRVH 566
+++ C H
Sbjct: 408 NTMISGCSHH 417
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 155/366 (42%), Gaps = 38/366 (10%)
Query: 41 YSSHCDPHCFGETPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQE 97
+S P+ F T + + C ++ ++ KQ H +K GL S N ++ + +
Sbjct: 128 FSGESRPNEFVATVV--FKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLV-YMYSLC 184
Query: 98 SGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFL 157
SG+ + R V D +P+ + ++++ + GY K G+ + + ++ T+
Sbjct: 185 SGNGEAIR-VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSS 243
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
L+ F+N L + V+ G ++ + A I+++ CG V A ++F+ A +
Sbjct: 244 LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNI 303
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
++ Y + V PN T ++L++ ++L+ L G+ ++
Sbjct: 304 FLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGL 363
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
+ + ++++ N L++M+ A +G I+ A
Sbjct: 364 VLKSGYRNHVMVGNALVNMY-------------------------------AKSGSIEDA 392
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
RK F M RD V+W MI G REAL F M + P+ T + +L AC+H+
Sbjct: 393 RKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHI 452
Query: 398 GALELG 403
G +E G
Sbjct: 453 GFVEQG 458
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 125/264 (47%), Gaps = 10/264 (3%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
Q+HS+ ++ G +++ +I + G V YA++VFD ++F+ T++ Y +
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINM--YGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQ 315
Query: 129 ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFV 188
+ ++++ M + P+ +TF LL LK G +L +K G +++ V
Sbjct: 316 DKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMV 375
Query: 189 QKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGV 248
A +++++ G ++ A K F+ ++VTWN M+SG + G
Sbjct: 376 GNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGE 435
Query: 249 SPNSVTLVLILSACSKLTDLAGG-NYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
PN +T + +L ACS + + G +Y Q + + V+P++ ++ + G A+
Sbjct: 436 IPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE 495
Query: 308 GVFDNMKTR----DVISWTSIVSG 327
D M+T DV++W ++++
Sbjct: 496 ---DFMRTAPIEWDVVAWRTLLNA 516
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 6/302 (1%)
Query: 301 GEMDAAKGVFDNMKTR--DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
GE A + N +R D S+++ + + ARK FD MPER+ VSW AM+ G
Sbjct: 50 GESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKG 109
Query: 359 YLRMNHFREALALFREMQMS-HVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINN 417
Y E L LF+ M S +P+EF + +C++ G +E G+ K + +
Sbjct: 110 YQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLIS 169
Query: 418 DTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI 477
F+ + L+ MY C +A + ++ D ++++ + G G +E L +
Sbjct: 170 HEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTA 229
Query: 478 ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL 537
+++TY+ L ++ + + + M ++ G V G ++++ + G +
Sbjct: 230 NEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRM-VRFGFNAEVEACGALINMYGKCGKV 288
Query: 538 KEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA-EMAAKQIIELEPENGSVYVLLCNI 596
A V + + N + +++ A K+ E A + +K + P N + +L N
Sbjct: 289 LYAQRVFDDTHAQ-NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNS 347
Query: 597 YA 598
A
Sbjct: 348 IA 349
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/707 (30%), Positives = 357/707 (50%), Gaps = 50/707 (7%)
Query: 57 LLERCKSTYQL---KQIHSKTIKMGLSSDPVF-GNKVIAFCCTQESGDVDYARQVFDTIP 112
L E C+ L + +H + ++MG+ + V N V+ C E ++ A ++FD +
Sbjct: 89 LFEACRELRSLSHGRLLHDR-MRMGIENPSVLLQNCVLQMYC--ECRSLEDADKLFDEMS 145
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
+ TMI Y+ + ++ MLA KP S + LLK N AL +G+
Sbjct: 146 ELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQ 205
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
+ H ++ GL SN ++ ++++ CG + A ++F+ + V ++ GY +
Sbjct: 206 IHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGR 265
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENV 292
GV +S ++L AC+ L +L G ++ + + +E + +
Sbjct: 266 ARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTP 325
Query: 293 LLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSW 352
L+D + C ++A F ++ + +SW++I+SG
Sbjct: 326 LVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG------------------------- 360
Query: 353 TAMIDGYLRMNHFREALALFREMQMSHVKP-DEFTMVSILTACAHLGALELGEWVKTYID 411
Y +M+ F EA+ F+ ++ + + FT SI AC+ L +G V
Sbjct: 361 ------YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
K + + SALI MY KCG ++ A + F+ M D WTA I G A G+ EAL
Sbjct: 415 KRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALR 474
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
+F M+ + P+ +T+I VL+AC+HAG+VE+G+ +M ++ + P + HY CM+D+
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIY 534
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYV 591
+R+G L EAL + NMP +P+++ W L C HKN+EL E+A +++ +L+PE+ + YV
Sbjct: 535 ARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYV 594
Query: 592 LLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYA 651
L N+Y +WE E+ +M ER +KK CS ++ G I+ F+ GD+ HPQ++EIY
Sbjct: 595 LPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYE 654
Query: 652 KLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALIS--SGPGVTIRI 709
KL+ + + + +E + L HSE+LAIA+ LIS I++
Sbjct: 655 KLKEFDGFMEGDMFQCNMTE---------RREQLLDHSERLAIAFGLISVHGNAPAPIKV 705
Query: 710 VKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
KNLR C DCH+ AK VS E+V+RD RFHHF+ G CSCN++W
Sbjct: 706 FKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 161/357 (45%), Gaps = 40/357 (11%)
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
GVS +S + + AC +L L+ G ++ + GI P+++++N +L M+ C ++ A
Sbjct: 78 GVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDA 137
Query: 307 KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
+FD M + +S T+++S +A G +D
Sbjct: 138 DKLFDEMSELNAVSRTTMISAYAEQGILD------------------------------- 166
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
+A+ LF M S KP ++L + + AL+ G + ++ + + ++T I + ++
Sbjct: 167 KAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIV 226
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
+MY KCG + A++ F +M K T ++VG G +AL +F +++ + D
Sbjct: 227 NMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSF 286
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
+ VL AC + G++ A + + G++ V+ +VD + + A
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVA-KLGLESEVSVGTPLVDFYIKCSSFESACRAFQE 345
Query: 547 MPVKPNSIVWGSLL-GACRVHKNVELAEMAAKQIIELEPENGSVY--VLLCNIYAAC 600
+ +PN + W +++ G C++ + E A K L +N S+ +I+ AC
Sbjct: 346 IR-EPNDVSWSAIISGYCQMSQ----FEEAVKTFKSLRSKNASILNSFTYTSIFQAC 397
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
EA +EM + V ++ + AC L +L G + + N + + ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
MY +C ++E A K F EM + + T MI A G ++A+ +FS M+ S P
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
Y +L + + ++ GR+ A + I+ G+ N + +V++ + G L A V
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHV-IRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 547 MPVKPNSIVWGSLLG 561
M VK G ++G
Sbjct: 245 MAVKKPVACTGLMVG 259
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/692 (31%), Positives = 365/692 (52%), Gaps = 40/692 (5%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K+IH+ IK+G SD N +I+ + G A +VF+ +P + WN+MI GY
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISL--YMKLGCAWDAEKVFEEMPERDIVSWNSMISGYL 207
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDS-NL 186
+ S + ++ ML KPD F+ L ++ + K GK + HAV+ +++ ++
Sbjct: 208 ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXX-XXXXXXX 245
V + + ++S G V A +IFN +V WNVM+ Y R
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
G+ P+ +T + +L A + L G ++ Y P++V+E L+DM+G CG++ +
Sbjct: 328 NGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A+ + FD+M E++ +SW ++I Y++
Sbjct: 384 AEVI-------------------------------FDRMAEKNVISWNSIIAAYVQNGKN 412
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
AL LF+E+ S + PD T+ SIL A A +L G + YI K++ ++T I ++L
Sbjct: 413 YSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSL 472
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
+ MY CG++E ARK F + KD W ++I+ A++G G ++ +FS MI S + P+
Sbjct: 473 VHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNK 532
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
T+ +L+AC+ +GMV++G ++F SM ++GI P + HYGCM+DL+ R G+ A +
Sbjct: 533 STFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
MP P + +WGSLL A R HK++ +AE AA+QI ++E +N YVLL N+YA RWE+
Sbjct: 593 EMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWED 652
Query: 606 LREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAG- 664
+ ++ +M +GI +T S +E G + F GD+SH + +IY L+ + + +
Sbjct: 653 VNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDI 712
Query: 665 YSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAK 724
Y S + + + + + RHS +LA + LIS+ G + + N R+C CH+ +
Sbjct: 713 YVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLE 772
Query: 725 LVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
S+ RE+VV D FHHF +G CSC N+W
Sbjct: 773 KASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 171/379 (45%), Gaps = 40/379 (10%)
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVK 381
T + GFA++ ++ A + FD+M + D W MI G+ + EA+ + M + VK
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 382 PDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKT 441
D FT ++ + A + +LE G+ + + K +D ++ ++LI +Y K G A K
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 442 FKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMV 501
F+EM ++D W +MI G G G +L +F M++ PD + + L AC+H
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 502 EKGRKFFASMTIQHGIKPNVTHYGCMV-----DLLSRAGHLKEALDVILNMPVKPNSIVW 556
+ G++ H ++ + MV D+ S+ G + A + I N ++ N + W
Sbjct: 248 KMGKEIHC-----HAVRSRIETGDVMVMTSILDMYSKYGEVSYA-ERIFNGMIQRNIVAW 301
Query: 557 GSLLGACRVHKNVELAEMAAKQIIE---LEPENGSVYVLLCNIYAACKRWENLREVRTIM 613
++G + V A + +++ E L+P+ + N+ A E R +
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPD----VITSINLLPASAILEG-RTIHGYA 356
Query: 614 MERG-----------IKKTPGCSLMEMNGIIYEFVAGDQ---------SHPQSKEIYAKL 653
M RG I C ++ +I++ +A ++ Q+ + Y+ L
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 654 ENMMQDLTNAGYSPDTSEV 672
E + Q+L ++ PD++ +
Sbjct: 417 E-LFQELWDSSLVPDSTTI 434
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 7/295 (2%)
Query: 53 TPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
T I+LL + + + IH ++ G V +I E G + A +FD +
Sbjct: 336 TSINLLP-ASAILEGRTIHGYAMRRGFLPHMVLETALIDM--YGECGQLKSAEVIFDRMA 392
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
+V WN++I Y + S + ++ + ++ PDS T +L + ++L G+
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
+ + VK SN + + +H++++CG ++ A K FN +VV+WN ++ Y
Sbjct: 453 IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGF 512
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACS--KLTDLAGGNYVYQYLTEGIVEPNLVME 290
V+PN T +L+ACS + D G Y E ++P +
Sbjct: 513 GRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD-EGWEYFESMKREYGIDPGIEHY 571
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVIS-WTSIVSGFANTGQIDLARKYFDQM 344
+LD+ G G AAK + M W S+++ N I +A +Q+
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQI 626
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/712 (32%), Positives = 358/712 (50%), Gaps = 60/712 (8%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRI 129
IH K + S F N+ + C S +D AR+VF+ +P P V ++ MI GY+R
Sbjct: 21 IHGKCYR-SFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRS 79
Query: 130 SCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAV----------- 178
+ ++++ M ++ + ++ + A+K + + +V
Sbjct: 80 NRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCF 139
Query: 179 ---KLGLDSNLFVQ---------KAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG 226
K+ LF Q + +H + G VD A K+F V++W M+ G
Sbjct: 140 RSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICG 199
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN 286
++ + S +++AC+ G V+ I++
Sbjct: 200 LDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGL----IIKLG 255
Query: 287 LVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
+ E + S+++ +AN +I +RK FD+
Sbjct: 256 FLYEEYVS---------------------------ASLITFYANCKRIGDSRKVFDEKVH 288
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
WTA++ GY +AL++F M + + P++ T S L +C+ LG L+ G+ +
Sbjct: 289 EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHG 466
K + D F+G++L+ MY GNV A F ++ +K W ++IVG A +G G
Sbjct: 349 HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRG 408
Query: 467 EEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMT--IQHGIKPNVTHY 524
+ A +F MI + PD+IT+ G+LSAC+H G +EKGRK F M+ I H I + HY
Sbjct: 409 KWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH-IDRKIQHY 467
Query: 525 GCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEP 584
CMVD+L R G LKEA ++I M VKPN +VW +LL ACR+H +V+ E AA I L+
Sbjct: 468 TCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS 527
Query: 585 ENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHP 644
++ + YVLL NIYA+ RW N+ ++R M + GI K PG S + + G +EF +GDQ P
Sbjct: 528 KSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--P 585
Query: 645 QSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPG 704
IY KLE + + L GY+PD D+ +E KE L+ HSE+LAIA+ LI++ G
Sbjct: 586 HCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEG 645
Query: 705 VTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+ ++KNLR+C DCH + KL+S RE+V+RD RFHHF++G CSC ++W
Sbjct: 646 SAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 7/275 (2%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCT-QESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
Q+H IK+G + +I F + GD +R+VFD H V +W ++ GYS
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGD---SRKVFDEKVHEQVAVWTALLSGYS 302
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ +S++ ML ++I P+ TF L + L +GK + AVKLGL+++ F
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAF 362
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V + + ++S G V+ A +F +V+WN ++ G +
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI--VEPNLVMENVLLDMFGACGEMDA 305
P+ +T +LSACS L G ++ Y++ GI ++ + ++D+ G CG++
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKE 482
Query: 306 AKGVFDNMKTR-DVISWTSIVSGFANTGQIDLARK 339
A+ + + M + + + W +++S +D K
Sbjct: 483 AEELIERMVVKPNEMVWLALLSACRMHSDVDRGEK 517
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K++H +K+GL +D GN ++ +SG+V+ A VF I S+ WN++I G +
Sbjct: 346 KEMHGVAVKLGLETDAFVGNSLVVM--YSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCA 403
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLL 174
+ K ++ M+ N +PD TF LL ++ L+ G+ L
Sbjct: 404 QHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF 450
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/444 (41%), Positives = 279/444 (62%), Gaps = 9/444 (2%)
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
D + T+++ ++ G + A K FD+MP RD SW A+I G + N EA+ L++ M+
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
++ E T+V+ L AC+HLG ++ GE I N++ + +A IDMY KCG V+
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGE----NIFHGYSNDNVIVSNAAIDMYSKCGFVD 258
Query: 437 KARKTFKEMHQKDKFI-WTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSAC 495
KA + F++ K + W MI G A++G AL +F + ++ I PDD++Y+ L+AC
Sbjct: 259 KAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTAC 318
Query: 496 THAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIV 555
HAG+VE G F +M + G++ N+ HYGC+VDLLSRAG L+EA D+I +M + P+ ++
Sbjct: 319 RHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVL 377
Query: 556 WGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMME 615
W SLLGA ++ +VE+AE+A+++I E+ N +VLL N+YAA RW+++ VR M
Sbjct: 378 WQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMES 437
Query: 616 RGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLD 675
+ +KK PG S +E G I+EF D+SH Q +EIY K++ + + GY T V D
Sbjct: 438 KQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHD 497
Query: 676 IGEEDKETALFRHSEKLAIAYALI---SSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNR 732
IGEE+KE AL HSEKLA+AY L+ + +R++ NLR+C DCH + K +SK Y R
Sbjct: 498 IGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKR 557
Query: 733 ELVVRDKTRFHHFRHGVCSCNNFW 756
E++VRD+ RFH F+ G CSC +FW
Sbjct: 558 EIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 188/444 (42%), Gaps = 53/444 (11%)
Query: 56 SLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS 115
+++++C S Q+KQ+ S + G ++++ C GD+ +A Q+F IP P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHNI------KPDSFTFPFLLKGFTNDMALKY 169
WN +I+G++ S P S Y ML + + D+ T F LK +
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
L + GL ++ + + +S G + A+K+F+ +V +WN +++G
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
G+ + VT+V L ACS L D+ G ++ G N+++
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH----GYSNDNVIV 243
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMK-TRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
N +DM+ CG +D A VF+ + V++W ++++GFA G+
Sbjct: 244 SNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEA-------------- 289
Query: 349 YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKT 408
AL +F +++ + +KPD+ + ++ LTAC H G +E G V
Sbjct: 290 -----------------HRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFN 332
Query: 409 YIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ-KDKFIWTAMIVGLAINGHGE 467
+ + + ++D+ + G + +A M D +W +++
Sbjct: 333 NMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL---------- 382
Query: 468 EALTMFSNMIESSITPDDITYIGV 491
A ++S++ + I +I +GV
Sbjct: 383 GASEIYSDVEMAEIASREIKEMGV 406
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 13/248 (5%)
Query: 332 GQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM------QMSHVKPDEF 385
G + A + F +P+ W A+I G+ +H A + +R M + + D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 386 TMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM 445
T L ACA + + I++ ++ D+ + + L+D Y K G++ A K F EM
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 446 HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGR 505
+D W A+I GL EA+ ++ M I ++T + L AC+H G V++G
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 506 KFFASMTIQHGI-KPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACR 564
F HG NV +D+ S+ G + +A V K + + W +++
Sbjct: 231 NIF------HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 565 VHKNVELA 572
VH A
Sbjct: 285 VHGEAHRA 292
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 175/441 (39%), Positives = 279/441 (63%), Gaps = 1/441 (0%)
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
D I TS+V ++ G +++A K FD+MP RD VSW MI + + +AL++++ M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
V D +T+V++L++CAH+ AL +G + + + F+ +ALIDMY KCG++E
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 437 KARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACT 496
A F M ++D W +MI+G ++GHG EA++ F M+ S + P+ IT++G+L C+
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 497 HAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVW 556
H G+V++G + F M+ Q + PNV HYGCMVDL RAG L+ +L++I + ++W
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 557 GSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMER 616
+LLG+C++H+N+EL E+A K++++LE N YVL+ +IY+A + +R ++
Sbjct: 381 RTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSH 440
Query: 617 GIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSP-DTSEVFLD 675
++ PG S +E+ +++FV D+ HP+S IY++L ++ AGY P D++
Sbjct: 441 DLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPT 500
Query: 676 IGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELV 735
+ + +A HSEKLAIAY L+ + G T+RI KNLR+C DCH K VSKA+NRE++
Sbjct: 501 LSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREII 560
Query: 736 VRDKTRFHHFRHGVCSCNNFW 756
VRD+ RFHHF G+CSCN++W
Sbjct: 561 VRDRVRFHHFADGICSCNDYW 581
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 214/467 (45%), Gaps = 39/467 (8%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTI-PH 113
+ +L+ C S +L++IHS I GL P N ++ FC +G + +A+ +FD
Sbjct: 9 VRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSD 68
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNI-KPDSFTFPFLLKGFTNDMALKYGKV 172
PS WN +I+G+S S P + I Y ML ++ +PD FTF F LK ++
Sbjct: 69 PSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLE 128
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
+ ++ G + V + + +S G V++A K+F+ ++V+WNVM+ ++ V
Sbjct: 129 IHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGL 188
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENV 292
GV +S TLV +LS+C+ ++ L G +++ + E + + N
Sbjct: 189 HNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 248
Query: 293 LLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSW 352
L+DM+ CG ++ A GVF+ M+ RDV++W S++ G+ G
Sbjct: 249 LIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG-------------------- 288
Query: 353 TAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKTYID 411
H EA++ FR+M S V+P+ T + +L C+H G ++ G E +
Sbjct: 289 -----------HGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSS 337
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARK-TFKEMHQKDKFIWTAMIVGLAINGH---GE 467
+ + + ++D+Y + G +E + + + +D +W ++ I+ + GE
Sbjct: 338 QFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGE 397
Query: 468 EALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
A+ + E+ D + + SA A RK S +Q
Sbjct: 398 VAMKKLVQL-EAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQ 443
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/715 (31%), Positives = 354/715 (49%), Gaps = 50/715 (6%)
Query: 53 TPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCT-----QESGDVDYARQV 107
T +S+L + IH +KMG S V+ C T +G A V
Sbjct: 249 TLLSVLGHVDHQKWGRGIHGLVVKMGFDS-------VVCVCNTLLRMYAGAGRSVEANLV 301
Query: 108 FDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG-FTNDMA 166
F +P + WN+++ + + + M++ + TF L FT D
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF- 360
Query: 167 LKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG 226
+ G++L V GL N + A + ++ G + + ++ +VV WN ++ G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDL-AGGNYVYQYLTEGIVEP 285
Y GVS N +T+V +LSAC DL G ++ Y+ E
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMP 345
+ ++N L+ M+ CG++ +++ DL F+ +
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQ---------------------------DL----FNGLD 509
Query: 346 ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEW 405
R+ ++W AM+ H E L L +M+ V D+F+ L+A A L LE G+
Sbjct: 510 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 569
Query: 406 VKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGH 465
+ K +D+FI +A DMY KCG + + K + W +I L +G+
Sbjct: 570 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 629
Query: 466 GEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYG 525
EE F M+E I P +T++ +L+AC+H G+V+KG ++ + G++P + H
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 689
Query: 526 CMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPE 585
C++DLL R+G L EA I MP+KPN +VW SLL +C++H N++ AA+ + +LEPE
Sbjct: 690 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 749
Query: 586 NGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQ 645
+ SVYVL N++A RWE++ VR M + IKK CS +++ + F GD++HPQ
Sbjct: 750 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 809
Query: 646 SKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGV 705
+ EIYAKLE++ + + +GY DTS+ D EE KE L+ HSE+LA+AYAL+S+ G
Sbjct: 810 TMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGS 869
Query: 706 TIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGV----CSCNNFW 756
T+RI KNLR+C DCH + K VS+ R +V+RD+ RFHHF G+ FW
Sbjct: 870 TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKGSGFQQFW 924
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 217/484 (44%), Gaps = 38/484 (7%)
Query: 119 WNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLK--GFTNDMALKYGKVLLDH 176
WNTM+ G R+ G+ + M IKP SF L+ G + M + G +
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSM-FREGVQVHGF 67
Query: 177 AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXX 236
K GL S+++V A +HL+ + GLV + K+F VV+W ++ GY+
Sbjct: 68 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 127
Query: 237 XXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDM 296
GV N ++ L++S+C L D + G + + + +E L +EN L+ M
Sbjct: 128 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 187
Query: 297 FGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMI 356
G+ G +D A +FD M RD ISW SI + +A G
Sbjct: 188 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG------------------------ 223
Query: 357 DGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN 416
H E+ +F M+ H + + T+ ++L+ H+ + G + + K +
Sbjct: 224 -------HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 276
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM 476
+ + + L+ MY G +A FK+M KD W +++ +G +AL + +M
Sbjct: 277 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 336
Query: 477 IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
I S + + +T+ L+AC EKGR + + G+ N +V + + G
Sbjct: 337 ISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGE 395
Query: 537 LKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNI 596
+ E+ V+L MP + + + W +L+G ++ + A +AA Q + +E + S Y+ + ++
Sbjct: 396 MSESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVS-SNYITVVSV 452
Query: 597 YAAC 600
+AC
Sbjct: 453 LSAC 456
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/536 (24%), Positives = 235/536 (43%), Gaps = 42/536 (7%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+QI + +K GL S N +I+ + G+VDYA +FD + WN++ Y+
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSM--GNVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ + ++ LM + + +S T LL + K+G+ + VK+G DS +
Sbjct: 221 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 280
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V + +++ G A+ +F ++++WN +++ + G
Sbjct: 281 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 340
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
S N VT L+AC G ++ + + N ++ N L+ M+G GEM +
Sbjct: 341 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES- 399
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
R+ QMP RD V+W A+I GY +
Sbjct: 400 ------------------------------RRVLLQMPRRDVVAWNALIGGYAEDEDPDK 429
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLG-ALELGEWVKTYIDKNKINNDTFIGSALI 426
ALA F+ M++ V + T+VS+L+AC G LE G+ + YI +D + ++LI
Sbjct: 430 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLI 489
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
MY KCG++ ++ F + ++ W AM+ A +GHGEE L + S M ++ D
Sbjct: 490 TMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQF 549
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
++ LSA ++E+G++ + ++ G + + + D+ S+ G + E V+
Sbjct: 550 SFSEGLSAAAKLAVLEEGQQLHG-LAVKLGFEHDSFIFNAAADMYSKCGEIGE---VVKM 605
Query: 547 MPVKPNSIV--WGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAAC 600
+P N + W L+ A H E +++E+ + G +V ++ AC
Sbjct: 606 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG--HVTFVSLLTAC 659
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 215/505 (42%), Gaps = 40/505 (7%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
Q+H K GL SD ++ G V +R+VF+ +P +V W +++ GYS
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVY--GLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 129 ISCPKSGISMYLLMLAHNIKPDSFTFPFLLK--GFTNDMALKYGKVLLDHAVKLGLDSNL 186
P+ I +Y M + + + ++ G D +L G+ ++ VK GL+S L
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL--GRQIIGQVVKSGLESKL 178
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX 246
V+ + I + G VD A+ IF+ + ++WN + + Y +
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
NS T+ +LS + G ++ + + + + + N LL M+ G A
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 307 KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
VF M T+D+ISW S+++ F N G+
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRS-------------------------------L 327
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
+AL L M S + T S L AC E G + + + + + IG+AL+
Sbjct: 328 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALV 387
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
MY K G + ++R+ +M ++D W A+I G A + ++AL F M ++ + I
Sbjct: 388 SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 447
Query: 487 TYIGVLSACTHAG-MVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
T + VLSAC G ++E+G+ A + + G + + ++ + ++ G L + D +
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYI-VSAGFESDEHVKNSLITMYAKCGDLSSSQD-LF 505
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVE 570
N N I W ++L A H + E
Sbjct: 506 NGLDNRNIITWNAMLAANAHHGHGE 530
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 150/345 (43%), Gaps = 32/345 (9%)
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
V+WN M+SG RV G+ P+S + +++AC + +
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSM--------- 57
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
EG+ V ++ LL DV T+I+ + G + +
Sbjct: 58 FREGVQVHGFVAKSGLLS---------------------DVYVSTAILHLYGVYGLVSCS 96
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
RK F++MP+R+ VSWT+++ GY E + +++ M+ V +E +M ++++C L
Sbjct: 97 RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLL 156
Query: 398 GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMI 457
LG + + K+ + + + ++LI M GNV+ A F +M ++D W ++
Sbjct: 157 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 216
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
A NGH EE+ +FS M + T +LS H + GR + ++ G
Sbjct: 217 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG-LVVKMGF 275
Query: 518 KPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
V ++ + + AG EA V MP K + I W SL+ +
Sbjct: 276 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 319
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 119/228 (52%), Gaps = 3/228 (1%)
Query: 344 MPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL-EL 402
MP R+ VSW M+ G +R+ + E + FR+M +KP F + S++TAC G++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 403 GEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAI 462
G V ++ K+ + +D ++ +A++ +Y G V +RK F+EM ++ WT+++VG +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 463 NGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVT 522
G EE + ++ M + ++ + V+S+C GR+ + ++ G++ +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQV-VKSGLESKLA 179
Query: 523 HYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVE 570
++ +L G++ A + I + + ++I W S+ A + ++E
Sbjct: 180 VENSLISMLGSMGNVDYA-NYIFDQMSERDTISWNSIAAAYAQNGHIE 226
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/570 (36%), Positives = 317/570 (55%), Gaps = 45/570 (7%)
Query: 101 VDYARQVFDTIPH-PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN-IKPDSFTFPFLL 158
+ YAR++FD P F+ N+MIK Y ++Y + PD+FTF L
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV 218
K + M + G L + G ++++V + +++ G + A F+ V
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL 278
+W ++SGY R C +L DLA +
Sbjct: 146 SWTALISGYIR--------------------------------CGEL-DLAS-----KLF 167
Query: 279 TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLAR 338
+ ++V+ N ++D F G+M +A+ +FD M + VI+WT+++ G+ N ID AR
Sbjct: 168 DQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAAR 227
Query: 339 KYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ-MSHVKPDEFTMVSILTACAHL 397
K FD MPER+ VSW MI GY + +E + LF+EMQ + + PD+ T++S+L A +
Sbjct: 228 KLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 398 GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMI 457
GAL LGEW ++ + K++ + +A++DMY KCG +EKA++ F EM +K W AMI
Sbjct: 288 GALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMI 347
Query: 458 VGLAINGHGEEALTMF-SNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
G A+NG+ AL +F + MIE PD+IT + V++AC H G+VE+GRK+F M + G
Sbjct: 348 HGYALNGNARAALDLFVTMMIEEK--PDEITMLAVITACNHGGLVEEGRKWFHVMR-EMG 404
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAA 576
+ + HYGCMVDLL RAG LKEA D+I NMP +PN I+ S L AC +K++E AE
Sbjct: 405 LNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERIL 464
Query: 577 KQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEF 636
K+ +ELEP+N YVLL N+YAA KRW++ V+ +M + KK GCSL+E+N I+ EF
Sbjct: 465 KKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEF 524
Query: 637 VAGDQSHPQSKEIYAKLENMMQDLTNAGYS 666
++GD +HP + I+ L +++ + Y+
Sbjct: 525 ISGDTTHPHRRSIHLVLGDLLMHMNEEKYN 554
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 158/382 (41%), Gaps = 42/382 (10%)
Query: 65 YQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIK 124
YQ Q+HS+ + G +D V+ + G + AR FD +PH S W +I
Sbjct: 95 YQGLQLHSQIWRFGFCADMYVSTGVVDM--YAKFGKMGCARNAFDEMPHRSEVSWTALIS 152
Query: 125 GYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDS 184
GY I C + ++ L ++K D + ++ GF + + L D
Sbjct: 153 GY--IRCGELDLASKLFDQMPHVK-DVVIYNAMMDGFVKSGDMTSARRLFDEMTH----K 205
Query: 185 NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY-NRVXXXXXXXXXXXXX 243
+ IH + +D A K+F+ +V+WN M+ GY
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 244 XXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEM 303
+ P+ VT++ +L A S L+ G + + ++ ++ + + +LDM+ CGE+
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 304 DAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMN 363
+ AK +FD M + V SW +++ G+A G
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNA----------------------------- 356
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
R AL LF M M KPDE TM++++TAC H G +E G + + +N
Sbjct: 357 --RAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYG 413
Query: 424 ALIDMYFKCGNVEKARKTFKEM 445
++D+ + G++++A M
Sbjct: 414 CMVDLLGRAGSLKEAEDLITNM 435
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/688 (31%), Positives = 347/688 (50%), Gaps = 34/688 (4%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRI 129
+HS +K+G S+ G +I G VD AR VF+ I + +W ++ Y
Sbjct: 168 LHSPIVKLGYDSNAFVGAALIN--AYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 130 SCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQ 189
+ + + M P+++TF LK A + K + +K + V
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 190 KAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVS 249
+ L++ G + A K+FN +VV W+ M++ + + V
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVV 345
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
PN TL IL+ C+ G ++ + + + ++ + N L+D++ C +MD A
Sbjct: 346 PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV-- 403
Query: 310 FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREAL 369
K F ++ ++ VSW +I GY + +A
Sbjct: 404 -----------------------------KLFAELSSKNEVSWNTVIVGYENLGEGGKAF 434
Query: 370 ALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMY 429
++FRE + V E T S L ACA L +++LG V K + ++LIDMY
Sbjct: 435 SMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMY 494
Query: 430 FKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYI 489
KCG+++ A+ F EM D W A+I G + +G G +AL + M + P+ +T++
Sbjct: 495 AKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFL 554
Query: 490 GVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPV 549
GVLS C++AG++++G++ F SM HGI+P + HY CMV LL R+G L +A+ +I +P
Sbjct: 555 GVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPY 614
Query: 550 KPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREV 609
+P+ ++W ++L A N E A +A++I+++ P++ + YVL+ N+YA K+W N+ +
Sbjct: 615 EPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASI 674
Query: 610 RTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDT 669
R M E G+KK PG S +E G ++ F G HP K I LE + T AGY PD
Sbjct: 675 RKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDR 734
Query: 670 SEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVT-IRIVKNLRMCVDCHQMAKLVSK 728
+ V LD+ +E+K+ L+ HSE+LA+AY L+ I I+KNLR+C DCH K++S
Sbjct: 735 NAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISS 794
Query: 729 AYNRELVVRDKTRFHHFRHGVCSCNNFW 756
R+LV+RD RFHHF GVCSC + W
Sbjct: 795 IVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 184/426 (43%), Gaps = 36/426 (8%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K +H + +K DP G ++ + GD+ A +VF+ +P V W+ MI +
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQL--YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ + +++ M + P+ FT +L G G+ L VK+G D +++
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIY 384
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V A I +++ C +D A K+F + V+WN ++ GY +
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
VS VT L AC+ L + G V+ + + + N L+DM+ CG++ A+
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
VF+ M+T DV SW +++SG++ G A + D M +RD
Sbjct: 505 SVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD------------------- 545
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIGSALI 426
KP+ T + +L+ C++ G ++ G E ++ I + I + ++
Sbjct: 546 ------------CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMV 593
Query: 427 DMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
+ + G ++KA K + + ++ IW AM+ ++N + EE + I D+
Sbjct: 594 RLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA-SMNQNNEEFARRSAEEILKINPKDE 652
Query: 486 ITYIGV 491
TY+ V
Sbjct: 653 ATYVLV 658
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 138/328 (42%), Gaps = 50/328 (15%)
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
D+ + +++ + G A FD+MPER+ VS+ + GY + L RE
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
+ P FT S L L E+ W+ + I K +++ F+G+ALI+ Y CG+V+
Sbjct: 143 --ELNPHVFT--SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 437 KARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITY-------- 488
AR F+ + KD +W ++ NG+ E++L + S M + P++ T+
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASI 258
Query: 489 ---------------------------IGVLSACTHAGMVEKGRKFFASMTIQHGIKPNV 521
+G+L T G + K F M K +V
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP-----KNDV 313
Query: 522 THYGCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLLGACRVHKNVELAEMAAKQ 578
+ M+ + G EA+D+ + M V PN S+L C + K L E
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 579 IIELEPENGSVYV--LLCNIYAACKRWE 604
++++ + +YV L ++YA C++ +
Sbjct: 374 VVKVGFDL-DIYVSNALIDVYAKCEKMD 400
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/599 (34%), Positives = 332/599 (55%), Gaps = 43/599 (7%)
Query: 66 QLKQIHSK--TIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMI 123
LKQIH T + + +F ++++ CCT + YAR++ + S+ +W+++I
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAAT-QFRYARRLLCQLQTLSIQLWDSLI 74
Query: 124 KGYSRISCPKSGISM--YLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHA--VK 179
+S +S Y M + + P TFP LLK L+ HA VK
Sbjct: 75 GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV---FKLRDSNPFQFHAHIVK 131
Query: 180 LGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXX 239
GLDS+ FV+ + I +S GL D A ++F+ + +VVTW M+ G+ R
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVY 191
Query: 240 XXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ-YLTEGIVEPNLVMENVLLDMFG 298
GV+ N +T+V +L A K+ D+ G V+ YL G V+ ++ + + L+DM+G
Sbjct: 192 FVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYG 251
Query: 299 ACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
C D A+ K FD+MP R+ V+WTA+I G
Sbjct: 252 KCSCYDDAQ-------------------------------KVFDEMPSRNVVTWTALIAG 280
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
Y++ F + + +F EM S V P+E T+ S+L+ACAH+GAL G V Y+ KN I +
Sbjct: 281 YVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEIN 340
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
T G+ LID+Y KCG +E+A F+ +H+K+ + WTAMI G A +G+ +A +F M+
Sbjct: 341 TTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLS 400
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
S ++P+++T++ VLSAC H G+VE+GR+ F SM + ++P HY CMVDL R G L+
Sbjct: 401 SHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLE 460
Query: 539 EALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYA 598
EA +I MP++P ++VWG+L G+C +HK+ EL + AA ++I+L+P + Y LL N+Y+
Sbjct: 461 EAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYS 520
Query: 599 ACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHP-QSKEIYAKLENM 656
+ W+ + VR M ++ + K+PG S +E+ G + EF+A D P +S ++Y L+ +
Sbjct: 521 ESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/692 (31%), Positives = 345/692 (49%), Gaps = 36/692 (5%)
Query: 68 KQIHSKTIKMGLSSDPVF-GNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
+ +H++ +K S P F N +I + + AR V P +V W ++I G
Sbjct: 26 RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPE--SARLVLRLTPARNVVSWTSLISGL 83
Query: 127 SRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNL 186
++ + + + M + P+ FTFP K + GK + AVK G ++
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX 246
FV + ++ L D A K+F+ + TWN +S
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
PNS+T L+ACS L G ++ + + ++ + N L+D +G C ++ ++
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 307 KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
+ +F M T++ VSW +++ Y++ +
Sbjct: 264 EIIFTEMGTKNA-------------------------------VSWCSLVAAYVQNHEDE 292
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
+A L+ + V+ +F + S+L+ACA + LELG + + K + F+GSAL+
Sbjct: 293 KASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALV 352
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSI--TPD 484
DMY KCG +E + + F EM +K+ ++I G A G + AL +F M TP+
Sbjct: 353 DMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPN 412
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
+T++ +LSAC+ AG VE G K F SM +GI+P HY C+VD+L RAG ++ A + I
Sbjct: 413 YMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFI 472
Query: 545 LNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWE 604
MP++P VWG+L ACR+H +L +AA+ + +L+P++ +VLL N +AA RW
Sbjct: 473 KKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWA 532
Query: 605 NLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAG 664
VR + GIKK G S + + ++ F A D+SH +KEI L + ++ AG
Sbjct: 533 EANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAG 592
Query: 665 YSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAK 724
Y PD D+ EE+K + HSEKLA+A+ L+S V IRI KNLR+C DCH K
Sbjct: 593 YKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFK 652
Query: 725 LVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
VS + RE++VRD RFH F+ G+CSC ++W
Sbjct: 653 FVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 176/449 (39%), Gaps = 36/449 (8%)
Query: 156 FLLKGFTNDMALKYGKVLLDHAVKLGLDSNL--FVQKAFIHLFSLCGLVDLAHKIFNMGD 213
LLK + +++ G+V+ VK LDS F+ I+++S + A + +
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTP 69
Query: 214 AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY 273
A VV+W ++SG + GV PN T A + L G
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 274 VYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQ 333
++ V +LD+F C D + T
Sbjct: 130 IHALA---------VKCGRILDVFVGCSAFDM----------------------YCKTRL 158
Query: 334 IDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA 393
D ARK FD++PER+ +W A I + REA+ F E + P+ T + L A
Sbjct: 159 RDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNA 218
Query: 394 CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIW 453
C+ L LG + + ++ + D + + LID Y KC + + F EM K+ W
Sbjct: 219 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSW 278
Query: 454 TAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTI 513
+++ N E+A ++ + + D VLSAC +E GR A +
Sbjct: 279 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH-AV 337
Query: 514 QHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAE 573
+ ++ + +VD+ + G ++++ MP K N + SL+G V++A
Sbjct: 338 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAHQGQVDMAL 396
Query: 574 MAAKQIIELEPENGSVYVLLCNIYAACKR 602
+++ Y+ ++ +AC R
Sbjct: 397 ALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/513 (36%), Positives = 297/513 (57%), Gaps = 36/513 (7%)
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
VSP++ T ++ +C+ L+ L G V+ + + ++ L+ + CG+M+ A
Sbjct: 103 VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGA- 161
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
R+ FD+MPE+ V+W +++ G+ + E
Sbjct: 162 ------------------------------RQVFDRMPEKSIVAWNSLVSGFEQNGLADE 191
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
A+ +F +M+ S +PD T VS+L+ACA GA+ LG WV YI ++ + +G+ALI+
Sbjct: 192 AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIES-SITPDDI 486
+Y +CG+V KAR+ F +M + + WTAMI +G+G++A+ +F+ M + P+++
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
T++ VLSAC HAG+VE+GR + MT + + P V H+ CMVD+L RAG L EA I
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQ 371
Query: 547 MPVKPNSI---VWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRW 603
+ + +W ++LGAC++H+N +L AK++I LEP+N +V+L NIYA +
Sbjct: 372 LDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKT 431
Query: 604 ENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNA 663
+ + +R MM ++K G S++E+ Y F GD+SH ++ EIY LE ++
Sbjct: 432 DEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEI 491
Query: 664 GYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMA 723
GY+P + EV + EE+KE AL HSEKLA+A+ L+ + V I IVKNLR+C DCH
Sbjct: 492 GYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAF 550
Query: 724 KLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
K +S NR++ VRDK RFHHF++G CSC ++W
Sbjct: 551 KYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 211/429 (49%), Gaps = 47/429 (10%)
Query: 66 QLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
QL+Q+H+ I G K+I C+ + + Y +F ++P P F++N++IK
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLACSARA--IAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
S++ P ++ Y ML+ N+ P ++TF ++K + AL+ GK + HAV G +
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
+VQ A + +S CG ++ A ++F+ +V WN ++SG+ +
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
G P+S T V +LSAC++ ++ G++V+QY+ ++ N+ + L++++ CG++
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A+ VFD MK +V +WT+++S + G +
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHG-------------------------------YG 290
Query: 366 REALALFREMQMS-HVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN-KINNDTFIGS 423
++A+ LF +M+ P+ T V++L+ACAH G +E G V + K+ ++
Sbjct: 291 QQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV 350
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKDK-------FIWTAMIVGLAINGHGEEALTMFSNM 476
++DM + G +++A +K +HQ D +WTAM+ ++ + + + + +
Sbjct: 351 CMVDMLGRAGFLDEA---YKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRL 407
Query: 477 IESSITPDD 485
I ++ PD+
Sbjct: 408 I--ALEPDN 414
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 138/287 (48%), Gaps = 9/287 (3%)
Query: 341 FDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
F +P D + ++I ++ +A +R M S+V P +T S++ +CA L AL
Sbjct: 64 FLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSAL 123
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGL 460
+G+ V + + DT++ +AL+ Y KCG++E AR+ F M +K W +++ G
Sbjct: 124 RIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGF 183
Query: 461 AINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN 520
NG +EA+ +F M ES PD T++ +LSAC G V G + I G+ N
Sbjct: 184 EQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLG-SWVHQYIISEGLDLN 242
Query: 521 VTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQII 580
V +++L SR G + +A +V M + N W +++ A H + A +
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHG---YGQQAVELFN 298
Query: 581 ELEPENGSV--YVLLCNIYAACKRWENLREVRTIM--MERGIKKTPG 623
++E + G + V + +AC + E R++ M + + PG
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPG 345
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 126/284 (44%), Gaps = 9/284 (3%)
Query: 28 RLITNAPAITAKCYSSHCDPHCFGETPISLLERCKSTYQL---KQIHSKTIKMGLSSDPV 84
RL + A + SS+ P + T S+++ C L K +H + G D
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNY--TFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY 143
Query: 85 FGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLA 144
++ F + GD++ ARQVFD +P S+ WN+++ G+ + I ++ M
Sbjct: 144 VQAALVTF--YSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 145 HNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDL 204
+PDS TF LL A+ G + + + GLD N+ + A I+L+S CG V
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 205 AHKIFNMGDAWEVVTWNVMLSGY-NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
A ++F+ V W M+S Y G PN+VT V +LSAC+
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 264 KLTDLAGGNYVYQYLTEGI-VEPNLVMENVLLDMFGACGEMDAA 306
+ G VY+ +T+ + P + ++DM G G +D A
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 312/555 (56%), Gaps = 34/555 (6%)
Query: 205 AHKIFNMGDAWEVVTWNVMLSGYNR--VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSAC 262
A K+F+ ++V+WN ++SGY+ G PN VT + ++SAC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 263 SKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWT 322
+ GG+ EG LVM+ FG E+ I+W
Sbjct: 145 -----VYGGSK-----EEGRCIHGLVMK------FGVLEEVKVVNAF---------INW- 178
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKP 382
+ TG + + K F+ + ++ VSW MI +L+ + LA F + +P
Sbjct: 179 -----YGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP 233
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
D+ T +++L +C +G + L + + I + + I +AL+D+Y K G +E + F
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVE 502
E+ D WTAM+ A +G G +A+ F M+ I+PD +T+ +L+AC+H+G+VE
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 503 KGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
+G+ +F +M+ ++ I P + HY CMVDLL R+G L++A +I MP++P+S VWG+LLGA
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Query: 563 CRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTP 622
CRV+K+ +L AA+++ ELEP +G YV+L NIY+A W++ +R +M ++G+ +
Sbjct: 414 CRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRAS 473
Query: 623 GCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDL-TNAGYSPDTSEVFLDIGEEDK 681
GCS +E I++FV GD SHP+S++I KL+ + + + + GY T V D+GE+ K
Sbjct: 474 GCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVK 533
Query: 682 ETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTR 741
E + +HSEK+A+A+ L+ P I I KNLR+C DCH+ AK +S R +++RD R
Sbjct: 534 EEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKR 593
Query: 742 FHHFRHGVCSCNNFW 756
FHHF G CSC+++W
Sbjct: 594 FHHFLDGSCSCSDYW 608
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 4/245 (1%)
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHV--K 381
+V + G A K FD+MPERD VSW ++I GY + + + M +S V +
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 382 PDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKT 441
P+E T +S+++AC + G+ E G + + K + + + +A I+ Y K G++ + K
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 442 FKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMV 501
F+++ K+ W MIV NG E+ L F+ PD T++ VL +C G+V
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251
Query: 502 EKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLG 561
+ + + G N ++DL S+ G L+++ + + P+S+ W ++L
Sbjct: 252 RLAQGIHG-LIMFGGFSGNKCITTALLDLYSKLGRLEDS-STVFHEITSPDSMAWTAMLA 309
Query: 562 ACRVH 566
A H
Sbjct: 310 AYATH 314
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 169/407 (41%), Gaps = 37/407 (9%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
I+ ++ C S + +H K +K G++++ C G A ++FD +P
Sbjct: 38 IAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVG--CYLRLGHDVCAEKLFDEMPER 95
Query: 115 SVFIWNTMIKGYS-RISCPKSGISMYLLMLAH-NIKPDSFTFPFLLKGFTNDMALKYGKV 172
+ WN++I GYS R K + +M++ +P+ TF ++ + + G+
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
+ +K G+ + V AFI+ + G + + K+F +V+WN M+ + +
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGL 215
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENV 292
G P+ T + +L +C + + ++ + G N +
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275
Query: 293 LLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSW 352
LLD++ G ++ + VF + + D ++WT++++ +A G
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHG-------------------- 315
Query: 353 TAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGE-WVKTYID 411
R+A+ F M + PD T +L AC+H G +E G+ + +T
Sbjct: 316 -----------FGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSK 364
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMI 457
+ +I+ S ++D+ + G ++ A KEM + +W A++
Sbjct: 365 RYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
Query: 376 QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNV 435
Q S V + + S++ A ++EL + + K+ FIG L+ Y + G+
Sbjct: 23 QSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHD 82
Query: 436 EKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI--ESSITPDDITYIGVLS 493
A K F EM ++D W ++I G + G+ + + S M+ E P+++T++ ++S
Sbjct: 83 VCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142
Query: 494 ACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNS 553
AC + G E+GR + ++ G+ V ++ + G L + + ++ +K N
Sbjct: 143 ACVYGGSKEEGRCIHG-LVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NL 200
Query: 554 IVWGSLL 560
+ W +++
Sbjct: 201 VSWNTMI 207
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 119/265 (44%), Gaps = 6/265 (2%)
Query: 53 TPISLLERC---KSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
T +S++ C S + + IH +K G+ + N I + ++GD+ + ++F+
Sbjct: 136 TFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINW--YGKTGDLTSSCKLFE 193
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+ ++ WNTMI + + + G++ + + +PD TF +L+ + ++
Sbjct: 194 DLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRL 253
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
+ + + G N + A + L+S G ++ + +F+ + + + W ML+ Y
Sbjct: 254 AQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYAT 313
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEPNLV 288
G+SP+ VT +L+ACS + G + ++ +++ ++P L
Sbjct: 314 HGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLD 373
Query: 289 MENVLLDMFGACGEMDAAKGVFDNM 313
+ ++D+ G G + A G+ M
Sbjct: 374 HYSCMVDLLGRSGLLQDAYGLIKEM 398
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 360 bits (925), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 336/600 (56%), Gaps = 19/600 (3%)
Query: 49 CFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNK-VIAFCCTQESGDVDYARQV 107
C + I +L CK++ + QIH + IK G+ + + V+AF ++ D+AR V
Sbjct: 10 CSISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCV 69
Query: 108 F----------DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFL 157
F + P F+WN +IK +S P+ + + LML + + D F+ +
Sbjct: 70 FHEYHVCSFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLV 127
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
LK + +K G + K GL S+LF+Q I L+ CG + L+ ++F+ +
Sbjct: 128 LKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDS 187
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
V++N M+ GY + N ++ ++S ++ +D G +
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSD---GVDIASK 242
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
L + E +L+ N ++D + G ++ AKG+FD M RDV++W +++ G+A G + A
Sbjct: 243 LFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHA 302
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQM-SHVKPDEFTMVSILTACAH 396
+ FDQMP RD V++ +M+ GY++ + EAL +F +M+ SH+ PD+ T+V +L A A
Sbjct: 303 KTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQ 362
Query: 397 LGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAM 456
LG L + YI + + +G ALIDMY KCG+++ A F+ + K W AM
Sbjct: 363 LGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAM 422
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
I GLAI+G GE A M + S+ PDDIT++GVL+AC+H+G+V++G F M +H
Sbjct: 423 IGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHK 482
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAA 576
I+P + HYGCMVD+LSR+G ++ A ++I MPV+PN ++W + L AC HK E E+ A
Sbjct: 483 IEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVA 542
Query: 577 KQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEF 636
K +I N S YVLL N+YA+ W+++R VRT+M ER I+K PGCS +E++G ++EF
Sbjct: 543 KHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 360 bits (925), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/553 (33%), Positives = 314/553 (56%), Gaps = 32/553 (5%)
Query: 205 AHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK 264
A K+F+ ++ TWN M++G + G SP+ TL + S +
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAG 103
Query: 265 LTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSI 324
L ++ G ++ Y + +E +LV+ + L M+ G++ + V +M
Sbjct: 104 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM----------- 152
Query: 325 VSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
P R+ V+W +I G + L L++ M++S +P++
Sbjct: 153 --------------------PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNK 192
Query: 385 FTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE 444
T V++L++C+ L G+ + K ++ + S+LI MY KCG + A K F E
Sbjct: 193 ITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE 252
Query: 445 MHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE-SSITPDDITYIGVLSACTHAGMVEK 503
+D+ +W++MI +G G+EA+ +F+ M E +++ +++ ++ +L AC+H+G+ +K
Sbjct: 253 REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDK 312
Query: 504 GRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGAC 563
G + F M ++G KP + HY C+VDLL RAG L +A +I +MP+K + ++W +LL AC
Sbjct: 313 GLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSAC 372
Query: 564 RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPG 623
+HKN E+A+ K+I++++P + + YVLL N++A+ KRW ++ EVR M ++ +KK G
Sbjct: 373 NIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAG 432
Query: 624 CSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKET 683
S E G +++F GD+S +SKEIY+ L+ + ++ GY PDT+ V D+ EE+KE+
Sbjct: 433 ISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKES 492
Query: 684 ALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFH 743
L +HSEKLA+A+AL+ G IRI+KNLR+C DCH K +S NRE+ +RD +RFH
Sbjct: 493 DLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFH 552
Query: 744 HFRHGVCSCNNFW 756
HF +G CSC ++W
Sbjct: 553 HFINGKCSCGDYW 565
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 144/289 (49%), Gaps = 6/289 (2%)
Query: 294 LDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWT 353
+ M+ G+ +A V+ M+ ++ +S +++G+ G + ARK FD+MP+R +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 354 AMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 413
AMI G ++ E L+LFREM PDE+T+ S+ + A L ++ +G+ + Y K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMF 473
+ D + S+L MY + G ++ + M ++ W +I+G A NG E L ++
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 474 SNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSR 533
M S P+ IT++ VLS+C+ + +G++ A I+ G V ++ + S+
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAE-AIKIGASSVVAVVSSLISMYSK 239
Query: 534 AGHLKEALDVILNMPVKPNSIVWGSLLGACRVH----KNVELAEMAAKQ 578
G L +A + ++W S++ A H + +EL A+Q
Sbjct: 240 CGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 287
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 170/403 (42%), Gaps = 35/403 (8%)
Query: 98 SGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFL 157
+GD+ AR+VFD +P + WN MI G + + G+S++ M PD +T +
Sbjct: 38 AGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSV 97
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
G ++ G+ + + +K GL+ +L V + H++ G + + +
Sbjct: 98 FSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNL 157
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
V WN ++ G + G PN +T V +LS+CS L G ++
Sbjct: 158 VAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAE 217
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
+ + + + L+ M+ CG + A F + D + W+S++S + GQ D A
Sbjct: 218 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 277
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
+ F+ M E+ ++++ +E +++L AC+H
Sbjct: 278 IELFNTMAEQ------------------------------TNMEINEVAFLNLLYACSHS 307
Query: 398 GALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-DKFIWTA 455
G + G E ++K + ++D+ + G +++A + M K D IW
Sbjct: 308 GLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKT 367
Query: 456 MIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHA 498
++ I+ + E A +F +++ I P+D + VL A HA
Sbjct: 368 LLSACNIHKNAEMAQRVFKEILQ--IDPND-SACYVLLANVHA 407
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 147/323 (45%), Gaps = 10/323 (3%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+QIH TIK GL D V + + +G + V ++P ++ WNT+I G +
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHM--YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNA 168
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALK-YGKVLLDHAVKLGLDSNL 186
+ CP++ + +Y +M +P+ TF +L +D+A++ G+ + A+K+G S +
Sbjct: 169 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSS-CSDLAIRGQGQQIHAEAIKIGASSVV 227
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN-RVXXXXXXXXXXXXXXX 245
V + I ++S CG + A K F+ + + V W+ M+S Y
Sbjct: 228 AVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 287
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEPNLVMENVLLDMFGACGEMD 304
+ N V + +L ACS G ++ + E +P L ++D+ G G +D
Sbjct: 288 TNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLD 347
Query: 305 AAKGVFDNMKTR-DVISWTSIVSGFANTGQIDLARKYFD---QMPERDYVSWTAMIDGYL 360
A+ + +M + D++ W +++S ++A++ F Q+ D + + + +
Sbjct: 348 QAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHA 407
Query: 361 RMNHFREALALFREMQMSHVKPD 383
+R+ + + M+ +VK +
Sbjct: 408 SAKRWRDVSEVRKSMRDKNVKKE 430
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 355 bits (911), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 179/440 (40%), Positives = 276/440 (62%), Gaps = 1/440 (0%)
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
DV +S+V +A G+I ARK FD+MP+R+ V+W+ M+ GY +M EAL LF+E
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
++ ++++ S+++ CA+ LELG + K+ ++ +F+GS+L+ +Y KCG E
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 437 KARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACT 496
A + F E+ K+ IW AM+ A + H ++ + +F M S + P+ IT++ VL+AC+
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 497 HAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVW 556
HAG+V++GR +F M + I+P HY +VD+L RAG L+EAL+VI NMP+ P VW
Sbjct: 330 HAGLVDEGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVW 388
Query: 557 GSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMER 616
G+LL +C VHKN ELA AA ++ EL P + +++ L N YAA R+E+ + R ++ +R
Sbjct: 389 GALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR 448
Query: 617 GIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDI 676
G KK G S +E ++ F AG++ H +SKEIY KL + +++ AGY DTS V ++
Sbjct: 449 GEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREV 508
Query: 677 GEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVV 736
++K + HSE+LAIA+ LI+ IR++KNLR+C DCH K +S R ++V
Sbjct: 509 DGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIV 568
Query: 737 RDKTRFHHFRHGVCSCNNFW 756
RD RFH F G CSCN++W
Sbjct: 569 RDNNRFHRFEDGKCSCNDYW 588
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 197/443 (44%), Gaps = 46/443 (10%)
Query: 60 RCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCC-TQESGDVDYARQVFDTIPHPSVFI 118
R +ST + Q+H +K GLS P+ N +I F +Q D +R+ F+ P S
Sbjct: 27 RTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFD---SRRAFEDSPQKSSTT 83
Query: 119 WNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAV 178
W+++I +++ P + M+A N++PD P K G+ + ++
Sbjct: 84 WSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSM 143
Query: 179 KLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXX 238
K G D+++FV + + +++ CG + A K+F+ VVTW+ M+ GY ++
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Query: 239 XXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFG 298
++ N + ++S C+ T L G ++ + + + + + L+ ++
Sbjct: 204 LFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYS 263
Query: 299 ACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
CG + A VF +++P ++ W AM+
Sbjct: 264 KCGVPEGAYQVF-------------------------------NEVPVKNLGIWNAMLKA 292
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
Y + +H ++ + LF+ M++S +KP+ T +++L AC+H G ++ G + + +++I
Sbjct: 293 YAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPT 352
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEALTMFSNMI 477
++L+DM + G +++A + M + +W A++ ++ + E A
Sbjct: 353 DKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELA-------- 404
Query: 478 ESSITPDDITYIGVLSACTHAGM 500
+ D + +G +S+ H +
Sbjct: 405 --AFAADKVFELGPVSSGMHISL 425
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 128/246 (52%), Gaps = 9/246 (3%)
Query: 337 ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAH 396
+R+ F+ P++ +W+++I + + +L ++M +++PD+ + S +CA
Sbjct: 69 SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAI 128
Query: 397 LGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAM 456
L ++G V K + D F+GS+L+DMY KCG + ARK F EM Q++ W+ M
Sbjct: 129 LSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGM 188
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
+ G A G EEAL +F + ++ +D ++ V+S C ++ ++E GR+ ++I+
Sbjct: 189 MYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSS 247
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAA 576
+ +V L S+ G + A V +PVK N +W ++L A H + +
Sbjct: 248 FDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQ------ 300
Query: 577 KQIIEL 582
++IEL
Sbjct: 301 -KVIEL 305
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 139/297 (46%), Gaps = 6/297 (2%)
Query: 56 SLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS 115
++L RC + +H ++K G +D G+ ++ + G++ YAR++FD +P +
Sbjct: 127 AILSRCDIG---RSVHCLSMKTGYDADVFVGSSLVDM--YAKCGEIVYARKMFDEMPQRN 181
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLD 175
V W+ M+ GY+++ + + ++ L N+ + ++F ++ N L+ G+ +
Sbjct: 182 VVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG 241
Query: 176 HAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXX 235
++K DS+ FV + + L+S CG+ + A+++FN + WN ML Y +
Sbjct: 242 LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQK 301
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLD 295
G+ PN +T + +L+ACS + G Y + + E +EP L+D
Sbjct: 302 VIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVD 361
Query: 296 MFGACGEMDAAKGVFDNMKTRDVIS-WTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
M G G + A V NM S W ++++ +LA D++ E VS
Sbjct: 362 MLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVS 418
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 355 bits (911), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 323/618 (52%), Gaps = 75/618 (12%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSV 116
++++C + L+ + IK L+ D N+ I C + + +D A + P+V
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKR--LDLAVSTMTQMQEPNV 836
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDH 176
F++N + KG+ S P + +Y+ ML ++ P S+T+ L+K + A ++G+ L H
Sbjct: 837 FVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA--SSFASRFGESLQAH 894
Query: 177 AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXX 236
K G ++ +Q I +S G + A K+F+ + + W M+S Y RV
Sbjct: 895 IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVL----- 949
Query: 237 XXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDM 296
D+ N L + E N N L++
Sbjct: 950 ------------------------------DMDSAN----SLANQMSEKNEATSNCLING 975
Query: 297 FGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMI 356
+ G ++ A+ +F+ M +D+ISWT+ MI
Sbjct: 976 YMGLGNLEQAESLFNQMPVKDIISWTT-------------------------------MI 1004
Query: 357 DGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN 416
GY + +REA+A+F +M + PDE TM ++++ACAHLG LE+G+ V Y +N
Sbjct: 1005 KGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV 1064
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM 476
D +IGSAL+DMY KCG++E+A F + +K+ F W ++I GLA +G +EAL MF+ M
Sbjct: 1065 LDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM 1124
Query: 477 IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
S+ P+ +T++ V +ACTHAG+V++GR+ + SM + I NV HYG MV L S+AG
Sbjct: 1125 EMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGL 1184
Query: 537 LKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNI 596
+ EAL++I NM +PN+++WG+LL CR+HKN+ +AE+A +++ LEP N Y LL ++
Sbjct: 1185 IYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSM 1244
Query: 597 YAACKRWENLREVRTIMMERGIKKT-PGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLEN 655
YA RW ++ E+R M E GI+K PG S + ++ + F A D+SH S E+ L+
Sbjct: 1245 YAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDE 1304
Query: 656 MMQDLTNAGYSPDTSEVF 673
+ + AGY +T V+
Sbjct: 1305 IYDQMGLAGYVQETENVY 1322
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 266/409 (65%), Gaps = 2/409 (0%)
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
P++ T +L +++D+ G ++ + + ++ + L+ M+ +CG + A+ +
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 310 FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMP--ERDYVSWTAMIDGYLRMNHFRE 367
FD M +DV W ++++G+ G++D AR + MP R+ VSWT +I GY + E
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
A+ +F+ M M +V+PDE T++++L+ACA LG+LELGE + +Y+D +N + +A+ID
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVID 293
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
MY K GN+ KA F+ +++++ WT +I GLA +GHG EAL MF+ M+++ + P+D+T
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
+I +LSAC+H G V+ G++ F SM ++GI PN+ HYGCM+DLL RAG L+EA +VI +M
Sbjct: 354 FIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
Query: 548 PVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLR 607
P K N+ +WGSLL A VH ++EL E A ++I+LEP N Y+LL N+Y+ RW+ R
Sbjct: 414 PFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESR 473
Query: 608 EVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENM 656
+R +M G+KK G S +E+ +Y+F++GD +HPQ + I+ L+ M
Sbjct: 474 MMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 199/448 (44%), Gaps = 78/448 (17%)
Query: 67 LKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
LKQ H I GL+ D + K I C +G + YA VF P P+ ++ NTMI+
Sbjct: 31 LKQSHCYMIITGLNRDNLNVAKFIEAC--SNAGHLRYAYSVFTHQPCPNTYLHNTMIRAL 88
Query: 127 SRISCPKS---GISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLD 183
S + P + I++Y + A KPD+FTFPF+LK + +G+ + V G D
Sbjct: 89 SLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFD 148
Query: 184 SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRV------------- 230
S++ V I ++ CG + A K+F+ +V WN +L+GY +V
Sbjct: 149 SSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMM 208
Query: 231 --------------------XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAG 270
V P+ VTL+ +LSAC+ L L
Sbjct: 209 PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLEL 268
Query: 271 GNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFAN 330
G + Y+ + + + N ++DM+ G + A VF+ + R+V++WT+I++G A
Sbjct: 269 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLAT 328
Query: 331 TGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSI 390
G H EALA+F M + V+P++ T ++I
Sbjct: 329 HG-------------------------------HGAEALAMFNRMVKAGVRPNDVTFIAI 357
Query: 391 LTACAHLGALELGEWV-KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQK 448
L+AC+H+G ++LG+ + + K I+ + +ID+ + G + +A + K M +
Sbjct: 358 LSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA 417
Query: 449 DKFIWTAMIVGLAINGH-----GEEALT 471
+ IW +++ A N H GE AL+
Sbjct: 418 NAAIWGSLLA--ASNVHHDLELGERALS 443
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 38/288 (13%)
Query: 315 TRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRM---NHFREALAL 371
RD ++ + +N G + A F P + MI + N A+ +
Sbjct: 44 NRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITV 103
Query: 372 FREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFK 431
+R++ KPD FT +L + + G + + ++ + + LI MYF
Sbjct: 104 YRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFS 163
Query: 432 CGNVEKARKTFKEMHQKDKFIWTAM---------------------------------IV 458
CG + ARK F EM KD +W A+ I
Sbjct: 164 CGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVIS 223
Query: 459 GLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIK 518
G A +G EA+ +F M+ ++ PD++T + VLSAC G +E G + S G+
Sbjct: 224 GYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER-ICSYVDHRGMN 282
Query: 519 PNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
V+ ++D+ +++G++ +ALDV + N + W +++ H
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALDV-FECVNERNVVTWTTIIAGLATH 329
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 352 bits (902), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 193/585 (32%), Positives = 316/585 (54%), Gaps = 42/585 (7%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSV 116
LL++C S QL+QI ++ + + K + E GD +Y+ +F P+
Sbjct: 43 LLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAV------ELGDFNYSSFLFSVTEEPNH 96
Query: 117 FIWNTMIKGYSRI-SCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLD 175
+ +N MI+G + + ++ +S+Y M +KPD FT+ F+ + G+ +
Sbjct: 97 YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 156
Query: 176 HAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXX 235
K+GL+ ++ + + I +++ CG V A K+F+ + V+WN M+SGY+
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKD 216
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLD 295
G P+ TLV +L ACS L DL G + + + + + + L+
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 296 MFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAM 355
M+G CG++D+ AR+ F+QM ++D V+WTAM
Sbjct: 277 MYGKCGDLDS-------------------------------ARRVFNQMIKKDRVAWTAM 305
Query: 356 IDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
I Y + EA LF EM+ + V PD T+ ++L+AC +GALELG+ ++T+ + +
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL 365
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSN 475
++ ++ + L+DMY KCG VE+A + F+ M K++ W AMI A GH +EAL +F
Sbjct: 366 QHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDR 425
Query: 476 MIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAG 535
M S+ P DIT+IGVLSAC HAG+V +G ++F M+ G+ P + HY ++DLLSRAG
Sbjct: 426 M---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAG 482
Query: 536 HLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIEL-EPENGSVYVLLC 594
L EA + + P KP+ I+ ++LGAC K+V + E A + ++E+ E +N YV+
Sbjct: 483 MLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISS 542
Query: 595 NIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAG 639
N+ A K W+ ++R +M +RG+ KTPGCS +E+ G + EF+AG
Sbjct: 543 NVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 153/361 (42%), Gaps = 37/361 (10%)
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
+E L + C ++ + + M V ++ G + + F E +
Sbjct: 36 LERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPN 95
Query: 349 YVSWTAMIDGYLRM-NHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
+ S+ MI G N AL+L+R M+ S +KPD+FT + ACA L + +G V
Sbjct: 96 HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGE 467
+ + K + D I +LI MY KCG V ARK F E+ ++D W +MI G + G+ +
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 468 EALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGR--------------KFFASMTI 513
+A+ +F M E PD+ T + +L AC+H G + GR F S I
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 275
Query: 514 ----------------QHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPNSI 554
IK + + M+ + S+ G EA + M V P++
Sbjct: 276 SMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAG 335
Query: 555 VWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVL--LCNIYAACKRWENLREVRTI 612
++L AC +EL + EL ++ ++YV L ++Y C R E V
Sbjct: 336 TLSTVLSACGSVGALELGKQIETHASELSLQH-NIYVATGLVDMYGKCGRVEEALRVFEA 394
Query: 613 M 613
M
Sbjct: 395 M 395
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 350 bits (899), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/515 (35%), Positives = 295/515 (57%), Gaps = 6/515 (1%)
Query: 142 MLAHNIKP-DSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCG 200
M H I+ +++ PFL + + + K ++ H GL + F+ +
Sbjct: 1 MAFHGIREVENYFIPFLQRVKSRNEWKKINASIIIH----GLSQSSFMVTKMVDFCDKIE 56
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVS-PNSVTLVLIL 259
+D A ++FN V +N ++ Y P+ T +
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 260 SACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVI 319
+C+ L G V+ +L + ++V EN L+DM+ ++ A VFD M RDVI
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 320 SWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSH 379
SW S++SG+A GQ+ A+ F M ++ VSWTAMI GY + + EA+ FREMQ++
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 380 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKAR 439
++PDE +++S+L +CA LG+LELG+W+ Y ++ T + +ALI+MY KCG + +A
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 440 KTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAG 499
+ F +M KD W+ MI G A +G+ A+ F+ M + + P+ IT++G+LSAC+H G
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 500 MVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSL 559
M ++G ++F M + I+P + HYGC++D+L+RAG L+ A+++ MP+KP+S +WGSL
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416
Query: 560 LGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIK 619
L +CR N+++A +A ++ELEPE+ YVLL NIYA +WE++ +R ++ +K
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 620 KTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLE 654
KTPG SL+E+N I+ EFV+GD S P EI L+
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 212/467 (45%), Gaps = 71/467 (15%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
I L+R KS + K+I++ I GLS K++ FC E D+DYA ++F+ + +P
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE--DMDYATRLFNQVSNP 71
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIK-PDSFTFPFLLKGFTNDMALKYGKVL 173
+VF++N++I+ Y+ S I +Y +L + + PD FTFPF+ K + + GK +
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 174 LDHAVKLGLDSNLFVQKAFIHLF-SLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
H K G ++ + A I ++ LVD AHK+F+ +V++WN +LSGY R+
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKFDDLVD-AHKVFDEMYERDVISWNSLLSGYARLGQ 190
Query: 233 XXXXXXX-------------------------------XXXXXXXGVSPNSVTLVLILSA 261
G+ P+ ++L+ +L +
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPS 250
Query: 262 CSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISW 321
C++L L G +++ Y + N L++M+ CG + A +F M+ +DVISW
Sbjct: 251 CAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 310
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVK 381
++++SG+A G A+ F EMQ + VK
Sbjct: 311 STMISGYAYHGNA-------------------------------HGAIETFNEMQRAKVK 339
Query: 382 PDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARK 440
P+ T + +L+AC+H+G + G + +I LID+ + G +E+A +
Sbjct: 340 PNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVE 399
Query: 441 TFKEMHQK-DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
K M K D IW +++ G+ + AL +++E + P+D+
Sbjct: 400 ITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE--LEPEDM 444
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 325/600 (54%), Gaps = 34/600 (5%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
Q+H + G+ + N +++ + G D A ++F + WN MI GY +
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSM--YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 129 ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFV 188
+ ++ + M++ + PD+ TF LL + L+Y K + + ++ + ++F+
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 189 QKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGV 248
A I + C V +A IF+ ++ +VV + M+SGY +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 249 SPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKG 308
SPN +TLV IL L L G ++ ++ + + + ++DM+ CG M+
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN---- 493
Query: 309 VFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREA 368
LA + F+++ +RD VSW +MI + ++ A
Sbjct: 494 ---------------------------LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 369 LALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDM 428
+ +FR+M +S + D ++ + L+ACA+L + G+ + ++ K+ + +D + S LIDM
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 429 YFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE-SSITPDDIT 487
Y KCGN++ A FK M +K+ W ++I +G +++L +F M+E S I PD IT
Sbjct: 587 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 646
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
++ ++S+C H G V++G +FF SMT +GI+P HY C+VDL RAG L EA + + +M
Sbjct: 647 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM 706
Query: 548 PVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLR 607
P P++ VWG+LLGACR+HKNVELAE+A+ ++++L+P N YVL+ N +A + WE++
Sbjct: 707 PFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVT 766
Query: 608 EVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSP 667
+VR++M ER ++K PG S +E+N + FV+GD +HP+S IY+ L +++ +L GY P
Sbjct: 767 KVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 146/582 (25%), Positives = 263/582 (45%), Gaps = 46/582 (7%)
Query: 49 CFGETP-----ISLLERCKSTYQLKQIH--SKTIK-MGLSSDPVFGNKVIAFCCTQESGD 100
CFG +P L++ C + K I S T+ +G+ + + +I E G
Sbjct: 131 CFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIK--AYLEYGK 188
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG 160
+D ++FD + IWN M+ GY++ S I + +M I P++ TF +L
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 161 FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTW 220
+ + + G L V G+D ++ + + ++S CG D A K+F M + VTW
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 221 NVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE 280
N M+SGY + GV P+++T +L + SK +L ++ Y+
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMR 368
Query: 281 GIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKY 340
+ ++ + + L+D + C + A+ +F + DV+ +T
Sbjct: 369 HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT------------------ 410
Query: 341 FDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
AMI GYL + ++L +FR + + P+E T+VSIL L AL
Sbjct: 411 -------------AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGL 460
+LG + +I K +N IG A+IDMY KCG + A + F+ + ++D W +MI
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517
Query: 461 AINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN 520
A + + A+ +F M S I D ++ LSAC + G+ M I+H + +
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM-IKHSLASD 576
Query: 521 VTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQII 580
V ++D+ ++ G+LK A++V M K N + W S++ AC H ++ + +++
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 581 E---LEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIK 619
E + P+ + ++ + E +R R++ + GI+
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 233/524 (44%), Gaps = 46/524 (8%)
Query: 57 LLERCKST---YQLKQIHSKTIKMGLSSDPVFGNKVI---AFCCT-QESGDVDYARQVFD 109
LL+ C + Q KQ+H+ I +S D +++ A C + + G + Y +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+ P WN++I + R ++ Y ML + PD TFP L+K K
Sbjct: 101 SSIRP----WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
L D LG+D N FV + I + G +D+ K+F+ + V WNVML+GY +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
+SPN+VT +LS C+ + G ++ + V+ +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY 349
+N LL M+ CG D A +F M D ++W ++SG+ +G ++
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME-------------- 322
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTY 409
E+L F EM S V PD T S+L + + LE + + Y
Sbjct: 323 -----------------ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCY 365
Query: 410 IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEA 469
I ++ I+ D F+ SALID YFKC V A+ F + + D ++TAMI G NG ++
Sbjct: 366 IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGC-MV 528
L MF +++ I+P++IT + +L ++ GR+ I+ G N + GC ++
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG-FIIKKGFD-NRCNIGCAVI 483
Query: 529 DLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA 572
D+ ++ G + A ++ + K + + W S++ C N A
Sbjct: 484 DMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAA 526
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 199/440 (45%), Gaps = 43/440 (9%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIA--FCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
KQIH ++ +S D + +I F C V A+ +F V ++ MI G
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCR----GVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
Y + M+ ++ I P+ T +L +ALK G+ L +K G D+
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNR 475
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
+ A I +++ CG ++LA++IF ++V+WN M++ +
Sbjct: 476 CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV 535
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
G+ + V++ LSAC+ L + G ++ ++ + + ++ E+ L+DM+ CG + A
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A VF MK ++++SW SI++ N G++
Sbjct: 596 AMNVFKTMKEKNIVSWNSIIAACGNHGKL------------------------------- 624
Query: 366 REALALFREM-QMSHVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIGS 423
+++L LF EM + S ++PD+ T + I+++C H+G ++ G + ++ + I +
Sbjct: 625 KDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA 684
Query: 424 ALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSIT 482
++D++ + G + +A +T K M D +W ++ ++ + E A S +++ +
Sbjct: 685 CVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD--LD 742
Query: 483 PDDITYIGVLSACTHAGMVE 502
P + Y VL + HA E
Sbjct: 743 PSNSGYY-VLISNAHANARE 761
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 127/310 (40%), Gaps = 35/310 (11%)
Query: 255 LVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMK 314
L L+L ACS L G V+ +L + + + +L M+ CG +F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 315 TR--DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALF 372
R + W SI+S F G ++ +ALA +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLN-------------------------------QALAFY 126
Query: 373 REMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKC 432
+M V PD T ++ AC L + +++ + ++ + F+ S+LI Y +
Sbjct: 127 FKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEY 186
Query: 433 GNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVL 492
G ++ K F + QKD IW M+ G A G + + FS M I+P+ +T+ VL
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 493 SACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPN 552
S C +++ G + + + G+ + ++ + S+ G +A + M + +
Sbjct: 247 SVCASKLLIDLGVQLHG-LVVVSGVDFEGSIKNSLLSMYSKCGRFDDA-SKLFRMMSRAD 304
Query: 553 SIVWGSLLGA 562
++ W ++
Sbjct: 305 TVTWNCMISG 314
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 260/422 (61%), Gaps = 4/422 (0%)
Query: 247 GVSPNSVTLVLILSACSKLTD--LAGGNYVYQYLTEGIVEPNLVM-ENVLLDMFGACGEM 303
GV PN +T + +LS C T A G+ ++ Y + ++ N VM ++ M+ G
Sbjct: 66 GVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRF 125
Query: 304 DAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMN 363
A+ VFD M+ ++ ++W +++ G+ +GQ+D A K FD+MPERD +SWTAMI+G+++
Sbjct: 126 KKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKG 185
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
+ EAL FREMQ+S VKPD +++ L AC +LGAL G WV Y+ N+ + +
Sbjct: 186 YQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN 245
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITP 483
+LID+Y +CG VE AR+ F M ++ W ++IVG A NG+ E+L F M E P
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKP 305
Query: 484 DDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV 543
D +T+ G L+AC+H G+VE+G ++F M + I P + HYGC+VDL SRAG L++AL +
Sbjct: 306 DAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKL 365
Query: 544 ILNMPVKPNSIVWGSLLGACRVH-KNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKR 602
+ +MP+KPN +V GSLL AC H N+ LAE K + +L ++ S YV+L N+YAA +
Sbjct: 366 VQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGK 425
Query: 603 WENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTN 662
WE ++R M G+KK PG S +E++ ++ F+AGD +H ++ I LE + DL
Sbjct: 426 WEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRL 485
Query: 663 AG 664
G
Sbjct: 486 QG 487
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 154/366 (42%), Gaps = 68/366 (18%)
Query: 119 WNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG---FTNDMALKYGKVLLD 175
W + I +R + M ++P+ TF LL G FT+ + G +L
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSG-SEALGDLLHG 97
Query: 176 HAVKLGLDSN-LFVQKAFIHLFS-------------------------------LCGLVD 203
+A KLGLD N + V A I ++S G VD
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 204 LAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
A K+F+ ++++W M++G+ + GV P+ V ++ L+AC+
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACT 217
Query: 264 KLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTS 323
L L+ G +V++Y+ + N+ + N L+D++ CG ++ A+ VF NM+ R V+SW S
Sbjct: 218 NLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNS 277
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
++ GFA G E+L FR+MQ KPD
Sbjct: 278 VIVGFAANGNA-------------------------------HESLVYFRKMQEKGFKPD 306
Query: 384 EFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
T LTAC+H+G +E G + + +I+ L+D+Y + G +E A K
Sbjct: 307 AVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLV 366
Query: 443 KEMHQK 448
+ M K
Sbjct: 367 QSMPMK 372
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 112/253 (44%), Gaps = 36/253 (14%)
Query: 342 DQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL--GA 399
+Q VSWT+ I+ R EA F +M ++ V+P+ T +++L+ C G+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 400 LELGEWVKTYIDKNKIN-NDTFIGSALIDMYFKCGNVEKAR------------------- 439
LG+ + Y K ++ N +G+A+I MY K G +KAR
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 440 ------------KTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
K F +M ++D WTAMI G G+ EEAL F M S + PD +
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
I L+ACT+ G + G + + K NV ++DL R G ++ A V NM
Sbjct: 209 IIAALNACTNLGALSFGL-WVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 548 PVKPNSIVWGSLL 560
K + W S++
Sbjct: 268 E-KRTVVSWNSVI 279
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 135/316 (42%), Gaps = 15/316 (4%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
SG VD A ++FD +P + W MI G+ + + + + M +KPD
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
L TN AL +G + + + +N+ V + I L+ CG V+ A ++F +
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
VV+WN ++ G+ G P++VT L+ACS + + G +Q
Sbjct: 272 VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQ 331
Query: 277 YLT-EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTG-Q 333
+ + + P + L+D++ G ++ A + +M + + + S+++ +N G
Sbjct: 332 IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN 391
Query: 334 IDLARKYFDQMPE------RDYVSWTAMI------DGYLRMNHFREALALFREMQMSHVK 381
I LA + + + +YV + M +G +M + L L ++ S ++
Sbjct: 392 IVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIE 451
Query: 382 PDEFTMVSILTACAHL 397
D+ V + AH+
Sbjct: 452 IDDCMHVFMAGDNAHV 467
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 343 bits (879), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 297/592 (50%), Gaps = 36/592 (6%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+ +H+ IK SD G + S VDYA +VF+ +P WN M+ G+
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNS--VDYAAKVFERMPERDATTWNAMLSGFC 129
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ S++ M + I PDS T L++ + + +LK + + ++LG+D +
Sbjct: 130 QSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT 189
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWE--VVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
V +I + CG +D A +F D + VV+WN M Y+
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR 249
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
P+ T + + ++C L G ++ + + ++ N + M+
Sbjct: 250 EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS------- 302
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
K+ D S AR FD M R VSWT MI GY
Sbjct: 303 --------KSEDTCS----------------ARLLFDIMTSRTCVSWTVMISGYAEKGDM 338
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDT-FIGSA 424
EALALF M S KPD T++S+++ C G+LE G+W+ D D I +A
Sbjct: 339 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA 398
Query: 425 LIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPD 484
LIDMY KCG++ +AR F +K WT MI G A+NG EAL +FS MI+ P+
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPN 458
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
IT++ VL AC H+G +EKG ++F M + I P + HY CMVDLL R G L+EAL++I
Sbjct: 459 HITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELI 518
Query: 545 LNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWE 604
NM KP++ +WG+LL AC++H+NV++AE AA+ + LEP+ + YV + NIYAA W+
Sbjct: 519 RNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWD 578
Query: 605 NLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENM 656
+R+IM +R IKK PG S++++NG + F G+ H +++ IY L +
Sbjct: 579 GFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGL 630
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 206/466 (44%), Gaps = 48/466 (10%)
Query: 62 KSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPH--PSVFIW 119
KS L+ +H+ I++G+ N I+ + GD+D A+ VF+ I +V W
Sbjct: 167 KSLKLLEAMHAVGIRLGVDVQVTVANTWIS--TYGKCGDLDSAKLVFEAIDRGDRTVVSW 224
Query: 120 NTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVK 179
N+M K YS +Y LML KPD TF L N L G+++ HA+
Sbjct: 225 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 180 LGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXX 239
LG D ++ FI ++S A +F++ + V+W VM+SGY
Sbjct: 285 LGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALAL 344
Query: 240 XXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYV-YQYLTEGIVEPNLVMENVLLDMFG 298
G P+ VTL+ ++S C K L G ++ + G N+++ N L+DM+
Sbjct: 345 FHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYS 404
Query: 299 ACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
CG + A+ +FDN + V++WT++++G+A G A K F +M + DY
Sbjct: 405 KCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY--------- 455
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
KP+ T +++L ACAH G+LE G W +I K N
Sbjct: 456 ----------------------KPNHITFLAVLQACAHSGSLEKG-WEYFHIMKQVYNIS 492
Query: 419 TFIG--SALIDMYFKCGNVEKARKTFKEMHQK-DKFIWTAMIVGLAINGH---GEEALTM 472
+ S ++D+ + G +E+A + + M K D IW A++ I+ + E+A
Sbjct: 493 PGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAES 552
Query: 473 FSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIK 518
N+ P Y+ + + AGM + G S+ Q IK
Sbjct: 553 LFNLEPQMAAP----YVEMANIYAAAGMWD-GFARIRSIMKQRNIK 593
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 193/458 (42%), Gaps = 30/458 (6%)
Query: 105 RQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTND 164
R+++ SV WN I+ + P + ++ M +P++FTFPF+ K
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 165 MALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVML 224
+ +++ H +K S++FV A + +F C VD A K+F + TWN ML
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 225 SGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
SG+ + ++P+SVT++ ++ + S L ++ V+
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 285 PNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQM 344
+ + N + +G CG++D+AK VF+ + D
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD--------------------------- 218
Query: 345 PERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGE 404
R VSW +M Y +A L+ M KPD T +++ +C + L G
Sbjct: 219 --RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Query: 405 WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAING 464
+ ++ + D + I MY K + AR F M + WT MI G A G
Sbjct: 277 LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKG 336
Query: 465 HGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHY 524
+EAL +F MI+S PD +T + ++S C G +E G+ A I + NV
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 396
Query: 525 GCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
++D+ S+ G + EA D+ N P K + W +++
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEK-TVVTWTTMIAG 433
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 10/266 (3%)
Query: 351 SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYI 410
+W I + N E+L LFREM+ +P+ FT + ACA L + E V ++
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 411 DKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEAL 470
K+ +D F+G+A +DM+ KC +V+ A K F+ M ++D W AM+ G +GH ++A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 471 TMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASM---TIQHGIKPNVTHYGCM 527
++F M + ITPD +T + ++ + + EK K +M I+ G+ VT
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 528 VDLLSRAGHLKEALDVILNMPVKPNSIV-WGSLLGACRVHKNVELAEMAAKQIIELEPEN 586
+ + G L A V + ++V W S+ A V E + + L E
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG--EAFDAFGLYCLMLREEF 252
Query: 587 GSVYVLLCNIYAACKRWENLREVRTI 612
N+ A+C+ E L + R I
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLI 278
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 339 bits (869), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 275/475 (57%), Gaps = 6/475 (1%)
Query: 183 DSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXX 242
D + FV I + S VD A+ +F+ V + M+ G+
Sbjct: 58 DQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHR 117
Query: 243 XXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY-QYLTEGIVEPNLVMENVLLDMFGACG 301
V P++ + +L AC DL ++ Q L G V +++++G G
Sbjct: 118 MIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLK-MMEIYGKSG 172
Query: 302 EMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLR 361
E+ AK +FD M RD ++ T +++ ++ G I A + F + +D V WTAMIDG +R
Sbjct: 173 ELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVR 232
Query: 362 MNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFI 421
+AL LFREMQM +V +EFT V +L+AC+ LGALELG WV ++++ ++ F+
Sbjct: 233 NKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFV 292
Query: 422 GSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSI 481
G+ALI+MY +CG++ +AR+ F+ M KD + MI GLA++G EA+ F +M+
Sbjct: 293 GNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGF 352
Query: 482 TPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEAL 541
P+ +T + +L+AC+H G+++ G + F SM ++P + HYGC+VDLL R G L+EA
Sbjct: 353 RPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAY 412
Query: 542 DVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACK 601
I N+P++P+ I+ G+LL AC++H N+EL E AK++ E E + YVLL N+YA+
Sbjct: 413 RFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSG 472
Query: 602 RWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENM 656
+W+ E+R M + GI+K PGCS +E++ I+EF+ GD +HP + IY +L+ +
Sbjct: 473 KWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 221/497 (44%), Gaps = 71/497 (14%)
Query: 29 LITNAPAITAKCYSSHCDPHC------FGETPISLLERCKSTYQLKQIHSKTIKMGLSSD 82
+I++ AIT + DP +T IS+L CK+ + IH+K I+ D
Sbjct: 1 MISSLAAITGGPSTFRRDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQD 60
Query: 83 PVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLM 142
++I C T +S VDYA VF + +P+V+++ MI G+ G+S+Y M
Sbjct: 61 AFVVFELIRVCSTLDS--VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRM 118
Query: 143 LAHNIKPDSFTFPFLLK-------------------GFTNDMALK----YGKV-LLDHAV 178
+ +++ PD++ +LK G + + LK YGK L +A
Sbjct: 119 IHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAK 178
Query: 179 KL---GLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXX 235
K+ D + I+ +S CG + A ++F + V W M+ G R
Sbjct: 179 KMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNK 238
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLD 295
VS N T V +LSACS L L G +V+ ++ +E + + N L++
Sbjct: 239 ALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALIN 298
Query: 296 MFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAM 355
M+ CG+++ A+ VF M+ +DVIS+ +++SG A G A
Sbjct: 299 MYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHG---------------------AS 337
Query: 356 IDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
+ EA+ FR+M +P++ T+V++L AC+H G L++G V + K
Sbjct: 338 V----------EAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM-KRVF 386
Query: 416 NNDTFIG--SALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEALTM 472
N + I ++D+ + G +E+A + + + + D + ++ I+G+ E +
Sbjct: 387 NVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKI 446
Query: 473 FSNMIESSITPDDITYI 489
+ ES PD TY+
Sbjct: 447 AKRLFESE-NPDSGTYV 462
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 143/350 (40%), Gaps = 34/350 (9%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKV-----------------------------IAFCCTQES 98
++IH++ +K+G S G K+ + C E
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
G + A ++F + W MI G R + ++ M N+ + FT +L
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV 218
++ AL+ G+ + ++ + FV A I+++S CG ++ A ++F + +V+
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 322
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL 278
++N M+SG G PN VTLV +L+ACS L G V+ +
Sbjct: 323 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Query: 279 TEGI-VEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTGQIDL 336
VEP + ++D+ G G ++ A +N+ D I +++S G ++L
Sbjct: 383 KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMEL 442
Query: 337 ARKYFDQMPER---DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
K ++ E D ++ + + Y ++E+ + M+ S ++ +
Sbjct: 443 GEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKE 492
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/463 (37%), Positives = 276/463 (59%), Gaps = 2/463 (0%)
Query: 202 VDLAHKIFNMGDAWEVVTWNVMLSGYNRVX--XXXXXXXXXXXXXXXGVSPNSVTLVLIL 259
++ A+ +F + WN ++ G++R V P +T +
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 260 SACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVI 319
A +L G ++ + + +E + + N +L M+ CG + A +F M DV+
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
Query: 320 SWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSH 379
+W S++ GFA G ID A+ FD+MP+R+ VSW +MI G++R F++AL +FREMQ
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 380 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKAR 439
VKPD FTMVS+L ACA+LGA E G W+ YI +N+ ++ + +ALIDMY KCG +E+
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 440 KTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAG 499
F+ +K W +MI+GLA NG E A+ +FS + S + PD +++IGVL+AC H+G
Sbjct: 314 NVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Query: 500 MVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSL 559
V + +FF M ++ I+P++ HY MV++L AG L+EA +I NMPV+ ++++W SL
Sbjct: 374 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
Query: 560 LGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIK 619
L ACR NVE+A+ AAK + +L+P+ YVLL N YA+ +E E R +M ER ++
Sbjct: 434 LSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQME 493
Query: 620 KTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTN 662
K GCS +E++ ++EF++ +HP+S EIY+ L+ + D++
Sbjct: 494 KEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVST 536
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 214/455 (47%), Gaps = 68/455 (14%)
Query: 51 GETPISLLE-RCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
G T + L++ +C + +LKQIH+ IK GL SD V ++V+AFCC S D++YA VF
Sbjct: 24 GNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFT 82
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLML--AHNIKPDSFTFPFLLKGFTNDMAL 167
I H + F+WNT+I+G+SR S P+ IS+++ ML + ++KP T+P + K +
Sbjct: 83 RINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQA 142
Query: 168 KYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNV----- 222
+ G+ L +K GL+ + F++ +H++ CG + A +IF ++VV WN
Sbjct: 143 RDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGF 202
Query: 223 --------------------------MLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLV 256
M+SG+ R V P+ T+V
Sbjct: 203 AKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMV 262
Query: 257 LILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR 316
+L+AC+ L G ++++Y+ E N ++ L+DM+ CG ++ VF+ +
Sbjct: 263 SLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK 322
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
+ W S++ G AN G F++ A+ LF E++
Sbjct: 323 QLSCWNSMILGLANNG--------FEE-----------------------RAMDLFSELE 351
Query: 377 MSHVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNV 435
S ++PD + + +LTACAH G + E+ + +K I + ++++ G +
Sbjct: 352 RSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLL 411
Query: 436 EKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEA 469
E+A K M ++D IW++++ G+ E A
Sbjct: 412 EEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 134/287 (46%), Gaps = 8/287 (2%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
G +D A+ +FD +P + WN+MI G+ R K + M+ M ++KPD FT LL
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV 218
A + G+ + ++ V+ + N V A I ++ CG ++ +F ++
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL 278
WN M+ G G+ P+SV+ + +L+AC+ ++ + ++ +
Sbjct: 326 CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
Query: 279 TEG-IVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKT-RDVISWTSIVSGFANTGQIDL 336
E ++EP++ +++++ G G ++ A+ + NM D + W+S++S G +++
Sbjct: 386 KEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEM 445
Query: 337 AR---KYFDQMPERDYVSWTAMIDGYLRMNHFREALA---LFREMQM 377
A+ K ++ + + + + Y F EA+ L +E QM
Sbjct: 446 AKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQM 492
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 311/573 (54%), Gaps = 44/573 (7%)
Query: 56 SLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS 115
+L + CKS L QIH++ I+ GL D + I+ + S + Y+ VF+ +P P
Sbjct: 15 TLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSS-SLSYSSSVFERVPSPG 73
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHNI-KPDSFTFPFLLKGFTNDMALKYGKVLL 174
++WN +IKGYS +S+ + M+ + +PD +TFP ++K +N+ ++ G +
Sbjct: 74 TYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVH 133
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXX 234
+++G D ++ V +F+ + C + A K+F V+W ++ Y +
Sbjct: 134 GLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE-- 191
Query: 235 XXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLL 294
L + DL + E NL N L+
Sbjct: 192 ------------------------LEEAKSMFDL-------------MPERNLGSWNALV 214
Query: 295 DMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTA 354
D G++ AK +FD M RD+IS+TS++ G+A G + AR F++ D +W+A
Sbjct: 215 DGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSA 274
Query: 355 MIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDK-- 412
+I GY + EA +F EM +VKPDEF MV +++AC+ +G EL E V +Y+ +
Sbjct: 275 LILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRM 334
Query: 413 NKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTM 472
NK ++ ++ ALIDM KCG++++A K F+EM Q+D + +M+ G+AI+G G EA+ +
Sbjct: 335 NKFSSH-YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRL 393
Query: 473 FSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLS 532
F M++ I PD++ + +L C + +VE+G ++F M ++ I + HY C+V+LLS
Sbjct: 394 FEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLS 453
Query: 533 RAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVL 592
R G LKEA ++I +MP + ++ WGSLLG C +H N E+AE+ A+ + ELEP++ YVL
Sbjct: 454 RTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVL 513
Query: 593 LCNIYAACKRWENLREVRTIMMERGIKKTPGCS 625
L NIYAA RW ++ +R M E GI K G S
Sbjct: 514 LSNIYAALDRWTDVAHLRDKMNENGITKICGRS 546
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 334 bits (856), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 325/628 (51%), Gaps = 45/628 (7%)
Query: 53 TPISLLERCKSTYQLK---QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
T SLL C +++ L+ Q HS IK L+ + GN ++ + G ++ ARQ+F+
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM--YAKCGALEDARQIFE 487
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+ WNT+I Y + ++ M I D LK T+ L
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
GK + +VK GLD +L + I ++S CG++ A K+F+ W VV+ N +++GY++
Sbjct: 548 GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE-GIVEPNLV 288
GV+P+ +T I+ AC K L G + +T+ G
Sbjct: 608 -NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEY 666
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKT-RDVISWTSIVSGFANTGQIDLARKYFDQMPER 347
+ LL M+ M A +F + + + ++ WT ++SG + G
Sbjct: 667 LGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG--------------- 711
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
+ EAL ++EM+ V PD+ T V++L C+ L +L G +
Sbjct: 712 ----------------FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH 755
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFI-WTAMIVGLAINGHG 466
+ I + D + LIDMY KCG+++ + + F EM ++ + W ++I G A NG+
Sbjct: 756 SLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYA 815
Query: 467 EEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGC 526
E+AL +F +M +S I PD+IT++GVL+AC+HAG V GRK F M Q+GI+ V H C
Sbjct: 816 EDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVAC 875
Query: 527 MVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPEN 586
MVDLL R G+L+EA D I +KP++ +W SLLGACR+H + E++A+++IELEP+N
Sbjct: 876 MVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQN 935
Query: 587 GSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQS 646
S YVLL NIYA+ WE +R +M +RG+KK PG S +++ + F AGD+SH +
Sbjct: 936 SSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEI 995
Query: 647 KEIYAKLE---NMMQDLTNAGYSPDTSE 671
+I LE ++M+D +A +PD E
Sbjct: 996 GKIEMFLEDLYDLMKD--DAVVNPDIVE 1021
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/582 (24%), Positives = 259/582 (44%), Gaps = 59/582 (10%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFC--CTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
K +HSK++ +G+ S+ GN ++ C Q V YA + FD + V WN+M+
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQ----VSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
YS I P + ++ + + I P+ FTF +L + +++G+ + +K+GL+ N
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
+ A + +++ C + A ++F V W + SGY +
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
G P+ + V +++ +L L ++ ++ P++V NV++ G G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETV 310
Query: 306 AKGVFDNMKTRDVIS---------------------------------------WTSIVS 326
A F NM+ V S +S+VS
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 327 GFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
++ +++ A K F+ + E++ V W AMI GY + + LF +M+ S D+FT
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 387 MVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH 446
S+L+ CA LE+G + I K K+ + F+G+AL+DMY KCG +E AR+ F+ M
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 447 QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRK 506
+D W +I + + EA +F M I D L ACTH + +G++
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 507 FFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
++++ G+ ++ ++D+ S+ G +K+A V ++P S+V + L A
Sbjct: 551 VHC-LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP--EWSVVSMNALIAGYSQ 607
Query: 567 KNVELAEMAAKQIIE--LEPENGSVYVLLCNIYAACKRWENL 606
N+E A + ++++ + P + I AC + E+L
Sbjct: 608 NNLEEAVVLFQEMLTRGVNPSE----ITFATIVEACHKPESL 645
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 201/433 (46%), Gaps = 38/433 (8%)
Query: 165 MALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVML 224
+AL+ GK + ++ LG+DS + A + L++ C V A K F+ + +V WN ML
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSML 132
Query: 225 SGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
S Y+ + + PN T ++LS C++ T++ G ++ + + +E
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 285 PNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANT------------- 331
N L+DM+ C + A+ VF+ + + + WT + SG+
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 332 ----------------------GQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREAL 369
G++ AR F +M D V+W MI G+ + A+
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 370 ALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMY 429
F M+ S VK T+ S+L+A + L+LG V K + ++ ++GS+L+ MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 430 FKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYI 489
KC +E A K F+ + +K+ W AMI G A NG + + +F +M S DD T+
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFT 432
Query: 490 GVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPV 549
+LS C + +E G +F S+ I+ + N+ +VD+ ++ G L++A + M
Sbjct: 433 SLLSTCAASHDLEMGSQFH-SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 550 KPNSIVWGSLLGA 562
+ N + W +++G+
Sbjct: 492 RDN-VTWNTIIGS 503
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/607 (29%), Positives = 313/607 (51%), Gaps = 12/607 (1%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
Q+H++ + + D +K+I+F Q+ A VFD I + F +N ++ Y+
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDR--FRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 129 ISCPKSGISMYLLMLAHN------IKPDSFTFPFLLKGFT--NDMAL-KYGKVLLDHAVK 179
S++L + + +PDS + +LK + +D L + + ++
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 180 LGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXX 239
G DS++FV I ++ C ++ A K+F+ +VV+WN M+SGY++
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 240 XXXXXX-XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFG 298
PN VT++ + AC + +DL G V++ + E ++ +L + N ++ +
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYA 280
Query: 299 ACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
CG +D A+ +FD M +D +++ +I+SG+ G + A F +M +W AMI G
Sbjct: 281 KCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISG 340
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
++ NH E + FREM +P+ T+ S+L + + L+ G+ + + +N +N+
Sbjct: 341 LMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN 400
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
++ +++ID Y K G + A++ F + WTA+I A++G + A ++F M
Sbjct: 401 IYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQC 460
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
PDD+T VLSA H+G + + F SM ++ I+P V HY CMV +LSRAG L
Sbjct: 461 LGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLS 520
Query: 539 EALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYA 598
+A++ I MP+ P + VWG+LL V ++E+A A ++ E+EPEN Y ++ N+Y
Sbjct: 521 DAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYT 580
Query: 599 ACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQ 658
RWE VR M G+KK PG S +E + F+A D S +SKE+Y +E +++
Sbjct: 581 QAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVE 640
Query: 659 DLTNAGY 665
+++ Y
Sbjct: 641 SMSDKEY 647
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 180/436 (41%), Gaps = 67/436 (15%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+Q+H I+ G SD GN +I + + +++ AR+VFD + V WN+MI GYS
Sbjct: 152 RQVHGFVIRGGFDSDVFVGNGMITY--YTKCDNIESARKVFDEMSERDVVSWNSMISGYS 209
Query: 128 RISCPKSGISMYLLMLA-HNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNL 186
+ + MY MLA + KP+ T + + L +G + ++ + +L
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV---------------------------- 218
+ A I ++ CG +D A +F+ + V
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 219 ---TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY 275
TWN M+SG + G PN+VTL +L + + ++L GG ++
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 276 QYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQID 335
+ + N+ + ++D + G + A+ VFDN K R +I+WT+I++ +A G D
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 336 LARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
A FDQ MQ KPD+ T+ ++L+A A
Sbjct: 450 SACSLFDQ-------------------------------MQCLGTKPDDVTLTAVLSAFA 478
Query: 396 HLGALELGEWV-KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH-QKDKFIW 453
H G ++ + + + + K I + ++ + + G + A + +M +W
Sbjct: 479 HSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVW 538
Query: 454 TAMIVGLAINGHGEEA 469
A++ G ++ G E A
Sbjct: 539 GALLNGASVLGDLEIA 554
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 305/579 (52%), Gaps = 41/579 (7%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGD-VDYARQVFDTIPH 113
+ L+ RC S KQI ++ I L D + NKV+ F +S D Y+ + +I
Sbjct: 10 LELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTF--LGKSADFASYSSVILHSIRS 67
Query: 114 P-SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
S F +NT++ Y+ P+ I Y +++ PD FTFP + K ++ GK
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
+ K+G +++VQ + +H + +CG A K+F +VV+W +++G+ R
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGL 187
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENV 292
V PN T V +L + ++ L+ G ++ + + +L N
Sbjct: 188 YKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNA 244
Query: 293 LLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSW 352
L+DM+ C Q+ A + F ++ ++D VSW
Sbjct: 245 LIDMYVKCE-------------------------------QLSDAMRVFGELEKKDKVSW 273
Query: 353 TAMIDGYLRMNHFREALALFREMQMSH-VKPDEFTMVSILTACAHLGALELGEWVKTYID 411
+MI G + +EA+ LF MQ S +KPD + S+L+ACA LGA++ G WV YI
Sbjct: 274 NSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYIL 333
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
I DT IG+A++DMY KCG +E A + F + K+ F W A++ GLAI+GHG E+L
Sbjct: 334 TAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLR 393
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASM-TIQHGIKPNVTHYGCMVDL 530
F M++ P+ +T++ L+AC H G+V++GR++F M + ++ + P + HYGCM+DL
Sbjct: 394 YFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDL 453
Query: 531 LSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNV-ELAEMAAKQIIELEPENGSV 589
L RAG L EAL+++ MPVKP+ + G++L AC+ + EL + +++E E+ V
Sbjct: 454 LCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGV 513
Query: 590 YVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLME 628
YVLL NI+AA +RW+++ +R +M +GI K PG S +E
Sbjct: 514 YVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 23/285 (8%)
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRD----------VISWTSIVSGFANTGQIDL--A 337
++VLL++ C + K + + TRD V+++ + FA+ + L
Sbjct: 6 KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSI 65
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
R S+ ++ Y + R + ++ + PD FT + AC
Sbjct: 66 RSVLSSF------SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKF 119
Query: 398 GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMI 457
+ G+ + + K +D ++ ++L+ Y CG A K F EM +D WT +I
Sbjct: 120 SGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGII 179
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
G G +EAL FS M + P+ TY+ VL + G + G+ + ++
Sbjct: 180 TGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHG-LILKRAS 235
Query: 518 KPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
++ ++D+ + L +A+ V + K + + W S++
Sbjct: 236 LISLETGNALIDMYVKCEQLSDAMRVFGELE-KKDKVSWNSMISG 279
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 191/617 (30%), Positives = 317/617 (51%), Gaps = 44/617 (7%)
Query: 153 TFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMG 212
T FL+ + + +L +KLG S+ F + + ++ A K+F+
Sbjct: 31 TKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEM 90
Query: 213 DAWEVVTWNVMLSGYNRVXX-XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGG 271
VV+W ++SGYN + V PN T + ACS L + G
Sbjct: 91 CEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIG 150
Query: 272 NYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANT 331
++ L + N+V+ + L+DM+G C +
Sbjct: 151 KNIHARLEISGLRRNIVVSSSLVDMYGKCND----------------------------- 181
Query: 332 GQIDLARKYFDQMPE--RDYVSWTAMIDGYLRMNHFREALALFREMQ--MSHVKPDEFTM 387
++ AR+ FD M R+ VSWT+MI Y + EA+ LFR ++ + ++F +
Sbjct: 182 --VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFML 239
Query: 388 VSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ 447
S+++AC+ LG L+ G+ + + ++T + ++L+DMY KCG++ A K F +
Sbjct: 240 ASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC 299
Query: 448 KDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKF 507
+T+MI+ A +G GE A+ +F M+ I P+ +T +GVL AC+H+G+V +G ++
Sbjct: 300 HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEY 359
Query: 508 FASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPV--KPNSIVWGSLLGACRV 565
+ M ++G+ P+ HY C+VD+L R G + EA ++ + V + +++WG+LL A R+
Sbjct: 360 LSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRL 419
Query: 566 HKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCS 625
H VE+ A+K++I+ + S Y+ L N YA WE+ +R M G K CS
Sbjct: 420 HGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACS 479
Query: 626 LMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGY------SPDTSEVFLDIGEE 679
+E +Y F AGD S +S EI L+++ + + G+ +S VF+D+ EE
Sbjct: 480 WIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEE 539
Query: 680 DKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDK 739
K+ + H E+LA+AY L+ G TIRI+ NLRMC DCH+ KL+S+ RE+VVRD
Sbjct: 540 AKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDV 599
Query: 740 TRFHHFRHGVCSCNNFW 756
RFH F++G C+C ++W
Sbjct: 600 NRFHCFKNGSCTCRDYW 616
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 206/467 (44%), Gaps = 49/467 (10%)
Query: 70 IHSKTIKMGLSSDPVFGNK-VIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
+H+ T+K+G +SD N VI++ +E ++ AR++FD + P+V W ++I GY+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKE---INTARKLFDEMCEPNVVSWTSVISGYND 107
Query: 129 ISCPKSGISMYLLMLAHN-IKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ P++ +SM+ M + P+ +TF + K + + GK + GL N+
Sbjct: 108 MGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIV 167
Query: 188 VQKAFIHLFSLCGLVDLAHKIFN--MGDAWEVVTWNVMLSGY--NRVXXXXXXXXXXXXX 243
V + + ++ C V+ A ++F+ +G VV+W M++ Y N
Sbjct: 168 VSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNA 227
Query: 244 XXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEM 303
N L ++SACS L L G + +T G E N V+ LLDM+ CG +
Sbjct: 228 ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
Query: 304 DAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMN 363
A+ +F ++ VIS+TS++ A G + A K FD
Sbjct: 288 SCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFD--------------------- 326
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIG 422
EM + P+ T++ +L AC+H G + G E++ +K + D+
Sbjct: 327 ----------EMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHY 376
Query: 423 SALIDMYFKCGNVEKA---RKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIES 479
+ ++DM + G V++A KT + ++ +W A++ ++G E +I+S
Sbjct: 377 TCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQS 436
Query: 480 SITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGC 526
+ YI A ++A V G + S+ ++ NV C
Sbjct: 437 NQQVTS-AYI----ALSNAYAVSGGWEDSESLRLEMKRSGNVKERAC 478
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 273/476 (57%), Gaps = 5/476 (1%)
Query: 185 NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXX 244
NL+ + + G++ A +F+ +VV+WN M+ GY +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 245 XXGVSPNSVTLVLILSACSKLTDLAGGNYVY-QYLTEGIVEPNLVMENVLLDMFGACGEM 303
G+ N + +L+AC K L + Q L G + N+V+ ++D + CG+M
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLS-NVVLSCSIIDAYAKCGQM 230
Query: 304 DAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMN 363
++AK FD M +D+ WT+++SG+A G ++ A K F +MPE++ VSWTA+I GY+R
Sbjct: 231 ESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQG 290
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
AL LFR+M VKP++FT S L A A + +L G+ + Y+ + + + + S
Sbjct: 291 SGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS 350
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQK-DKFIWTAMIVGLAINGHGEEALTMFSNMIESSIT 482
+LIDMY K G++E + + F+ K D W MI LA +G G +AL M +MI+ +
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 483 PDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALD 542
P+ T + +L+AC+H+G+VE+G ++F SMT+QHGI P+ HY C++DLL RAG KE +
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMR 470
Query: 543 VILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKR 602
I MP +P+ +W ++LG CR+H N EL + AA ++I+L+PE+ + Y+LL +IYA +
Sbjct: 471 KIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGK 530
Query: 603 WENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSK--EIYAKLENM 656
WE + ++R +M +R + K S +E+ + F D SH ++ EIY L N+
Sbjct: 531 WELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 182/398 (45%), Gaps = 35/398 (8%)
Query: 255 LVLILSACSKLTDLAGGNYVYQYLT-EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNM 313
L +L C L G +++++L G PN ++ N L+ M+ CG+ A VFD M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 314 KTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFR 373
R++ SW ++VSG+ +G + AR FD MPERD VSW M+ GY + + EAL ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 374 EMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCG 433
E + S +K +EF+ +LTAC L+L + ++ + ++ID Y KCG
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 434 NVEKARKTFKEMHQKDKFI-------------------------------WTAMIVGLAI 462
+E A++ F EM KD I WTA+I G
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 463 NGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVT 522
G G AL +F MI + P+ T+ L A + G++ M I+ ++PN
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNAI 347
Query: 523 HYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIE- 581
++D+ S++G L+ + V K + + W +++ A H A +I+
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 582 -LEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGI 618
++P ++ V+L + E LR ++ ++ GI
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 166/405 (40%), Gaps = 65/405 (16%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
+SG + AR VFD++P V WNTM+ GY++ + Y IK + F+F
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAG 184
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN------ 210
LL L+ + + G SN+ + + I ++ CG ++ A + F+
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 211 -------------MGDAWEV------------VTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
+GD V+W +++GY R
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
GV P T L A + + L G ++ Y+ V PN ++ + L+DM+ G ++A
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 306 AKGVFDNMKTR-DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
++ VF + D + W +++S A G + H
Sbjct: 365 SERVFRICDDKHDCVFWNTMISALAQHG-----------------------------LGH 395
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIGS 423
+AL + +M V+P+ T+V IL AC+H G +E G W ++ ++ I D +
Sbjct: 396 --KALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYA 453
Query: 424 ALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGE 467
LID+ + G ++ + +EM + DK IW A++ I+G+ E
Sbjct: 454 CLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEE 498
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 135/328 (41%), Gaps = 37/328 (11%)
Query: 57 LLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVI---AFCCTQES------------ 98
LL C + QL +Q H + + G S+ V +I A C ES
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 99 --------------GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLA 144
GD++ A ++F +P + W +I GY R + ++ M+A
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 145 HNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDL 204
+KP+ FTF L + +L++GK + + ++ + N V + I ++S G ++
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 205 AHKIFNM-GDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
+ ++F + D + V WN M+S + V PN TLV+IL+ACS
Sbjct: 365 SERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS 424
Query: 264 KLTDLAGGNYVYQYLT--EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR-DVIS 320
+ G ++ +T GIV P+ L+D+ G G + M D
Sbjct: 425 HSGLVEEGLRWFESMTVQHGIV-PDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHI 483
Query: 321 WTSIVSGFANTGQIDLARKYFDQMPERD 348
W +I+ G +L +K D++ + D
Sbjct: 484 WNAILGVCRIHGNEELGKKAADELIKLD 511
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 325 bits (834), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 188/615 (30%), Positives = 318/615 (51%), Gaps = 40/615 (6%)
Query: 46 DPHCFGETPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVD 102
D FG S+++ C S+ + KQ+H++ IK+ SS + N +IA +
Sbjct: 167 DQFAFG----SIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM--YVRFNQMS 220
Query: 103 YARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNI-KPDSFTFPFLLKGF 161
A +VF IP + W+++I G+S++ +S ML+ + P+ + F LK
Sbjct: 221 DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280
Query: 162 TNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWN 221
++ + YG + +K L N + +++ CG ++ A ++F+ + + +WN
Sbjct: 281 SSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWN 340
Query: 222 VMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEG 281
V+++G G P++++L +L A +K L+ G ++ Y+ +
Sbjct: 341 VIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKW 400
Query: 282 IVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYF 341
+L + N LL M+ C ++ +F++ +
Sbjct: 401 GFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN------------------------- 435
Query: 342 DQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALE 401
D VSW ++ L+ E L LF+ M +S +PD TM ++L C + +L+
Sbjct: 436 -----ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 490
Query: 402 LGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLA 461
LG V Y K + + FI + LIDMY KCG++ +AR+ F M +D W+ +IVG A
Sbjct: 491 LGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYA 550
Query: 462 INGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNV 521
+G GEEAL +F M + I P+ +T++GVL+AC+H G+VE+G K +A+M +HGI P
Sbjct: 551 QSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTK 610
Query: 522 THYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIE 581
H C+VDLL+RAG L EA I M ++P+ +VW +LL AC+ NV LA+ AA+ I++
Sbjct: 611 EHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILK 670
Query: 582 LEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQ 641
++P N + +VLLC+++A+ WEN +R+ M + +KK PG S +E+ I+ F A D
Sbjct: 671 IDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDI 730
Query: 642 SHPQSKEIYAKLENM 656
HP+ +IY L N+
Sbjct: 731 FHPERDDIYTVLHNI 745
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 136/581 (23%), Positives = 247/581 (42%), Gaps = 50/581 (8%)
Query: 52 ETPISLLERCKSTYQLKQ---IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVF 108
T ISL+ C S+ L Q IH + D + N +++ + G + AR+VF
Sbjct: 68 RTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM--YGKCGSLRDAREVF 125
Query: 109 DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALK 168
D +P ++ + ++I GYS+ I +YL ML ++ PD F F ++K + +
Sbjct: 126 DFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVG 185
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
GK L +KL S+L Q A I ++ + A ++F ++++W+ +++G++
Sbjct: 186 LGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 229 RVXXXXXXXXXXXXXXXXGV-SPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
++ GV PN L ACS L G+ ++ + + N
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER 347
+ L DM+ CG +++A+ VFD ++ D SW I++G AN G D
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD------------ 353
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
EA+++F +M+ S PD ++ S+L A AL G +
Sbjct: 354 -------------------EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHG 466
+YI K D + ++L+ MY C ++ F++ + D W ++ +
Sbjct: 395 SYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
Query: 467 EEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGC 526
E L +F M+ S PD IT +L C ++ G + +++ G+ P
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHC-YSLKTGLAPEQFIKNG 513
Query: 527 MVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIE--LEP 584
++D+ ++ G L +A + +M + + + W +L+ E A + K++ +EP
Sbjct: 514 LIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEP 572
Query: 585 ENGSVYVLLCNIYAACKR----WENLREVRTIMMERGIKKT 621
+V + AC E L+ T+ E GI T
Sbjct: 573 N----HVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPT 609
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 217/482 (45%), Gaps = 47/482 (9%)
Query: 44 HCDPHCFGETPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGD 100
H + + FG + L+ C S + QIH IK L+ + + G + G
Sbjct: 267 HPNEYIFGSS----LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDM--YARCGF 320
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG 160
++ AR+VFD I P WN +I G + +S++ M + PD+ + LL
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Query: 161 FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF-NMGDAWEVVT 219
T MAL G + + +K G ++L V + + +++ C + +F + + + V+
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS 440
Query: 220 WNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLT 279
WN +L+ + P+ +T+ +L C +++ L G+ V+ Y
Sbjct: 441 WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL 500
Query: 280 EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARK 339
+ + P ++N L+DM+ CG + A+ +FD+M RDV+SW++++ G+A +G
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG------- 553
Query: 340 YFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGA 399
F + EAL LF+EM+ + ++P+ T V +LTAC+H+G
Sbjct: 554 -FGE-----------------------EALILFKEMKSAGIEPNHVTFVGVLTACSHVGL 589
Query: 400 LELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMI 457
+E G + T ++ I+ S ++D+ + G + +A + EM + D +W ++
Sbjct: 590 VEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLL 649
Query: 458 VGLAINGHGEEALTMFSNMIESSITP-DDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
G+ A N+++ I P + ++ + S +G E +SM +H
Sbjct: 650 SACKTQGNVHLAQKAAENILK--IDPFNSTAHVLLCSMHASSGNWENAALLRSSMK-KHD 706
Query: 517 IK 518
+K
Sbjct: 707 VK 708
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 104/208 (50%), Gaps = 3/208 (1%)
Query: 356 IDGYLRMNHFREALALFREMQM-SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNK 414
I+ + N +REAL F Q S K T +S++ AC+ +L G + +I +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 415 INNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFS 474
DT + + ++ MY KCG++ AR+ F M +++ +T++I G + NG G EA+ ++
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 475 NMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRA 534
M++ + PD + ++ AC + V G++ A + I+ ++ ++ + R
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV-IKLESSSHLIAQNALIAMYVRF 216
Query: 535 GHLKEALDVILNMPVKPNSIVWGSLLGA 562
+ +A V +P+K + I W S++
Sbjct: 217 NQMSDASRVFYGIPMK-DLISWSSIIAG 243
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 325 bits (833), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 215/677 (31%), Positives = 339/677 (50%), Gaps = 60/677 (8%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
G++ YARQVFDT+P +V W +I GY + + G ++ ML+H P+ FT +L
Sbjct: 110 GNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVL 168
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE-- 216
+ GK + A+KLGL +++V A I ++ C A++ + + +A +
Sbjct: 169 ----TSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFK 224
Query: 217 -VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY 275
+VTWN M++ + GV + TL+ I S+ K +DL N V
Sbjct: 225 NLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVP-NEVS 283
Query: 276 Q---YLTEGIVEPNLVMEN-VLLDMFGACGEM-----DAAKGVFDNMKTRDVISWTSIVS 326
+ L V+ LV + V + EM D K + RD+++W I++
Sbjct: 284 KCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIIT 343
Query: 327 GFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
FA +D PER A+ LF +++ + PD +T
Sbjct: 344 AFA----------VYD--PER--------------------AIHLFGQLRQEKLSPDWYT 371
Query: 387 MVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH 446
S+L ACA L + + K DT + ++LI Y KCG+++ + F +M
Sbjct: 372 FSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMD 431
Query: 447 QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRK 506
+D W +M+ +++G + L +F M I PD T+I +LSAC+HAG VE+G +
Sbjct: 432 SRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLR 488
Query: 507 FFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
F SM + P + HY C++D+LSRA EA +VI MP+ P+++VW +LLG+CR H
Sbjct: 489 IFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKH 548
Query: 567 KNVELAEMAAKQIIEL-EPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCS 625
N L ++AA ++ EL EP N Y+ + NIY A + M ++K P S
Sbjct: 549 GNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLS 608
Query: 626 LMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPD-TSEVFLDIGEEDKETA 684
E+ ++EF +G + P + +Y +L+ ++ L GY P+ S EE +E
Sbjct: 609 WTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDN 668
Query: 685 LFRHSEKLAIAYALI----SSGPGVT-IRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDK 739
L HSEKLA+A+A++ SS GV I+I+KN R+C+DCH KL SK +E+++RD
Sbjct: 669 LLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDS 728
Query: 740 TRFHHFRHGVCSCNNFW 756
RFHHF+ CSCN++W
Sbjct: 729 NRFHHFKDSSCSCNDYW 745
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 192/462 (41%), Gaps = 57/462 (12%)
Query: 43 SHCDPHCFGETPISLLERCKSTYQL-KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDV 101
SHC P+ F T S+L C+ Y+ KQ+H +K+GL N VI+ G
Sbjct: 155 SHCFPNEF--TLSSVLTSCR--YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAA 210
Query: 102 DY-ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG 160
Y A VF+ I ++ WN+MI + + K I +++ M + + D T +
Sbjct: 211 AYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Query: 161 FTNDMALKYGKV------LLDHAVKLGLDSNLFVQKAFIHLFS--LCGLVDLAHKIFNMG 212
L +V L VK GL + V A I ++S L D M
Sbjct: 271 LYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMS 330
Query: 213 DAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGN 272
++V WN +++ + V +SP+ T +L AC+ L
Sbjct: 331 HCRDIVAWNGIITAF-AVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHAL 389
Query: 273 YVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTG 332
++ + +G + V+ N L+ + CG +D VFD+M +RDV+SW S++ ++ G
Sbjct: 390 SIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Query: 333 QIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILT 392
Q+D L +F++M + PD T +++L+
Sbjct: 450 QVD-------------------------------SILPVFQKMD---INPDSATFIALLS 475
Query: 393 ACAHLGALELGEWV-KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQKDK 450
AC+H G +E G + ++ +K + + +IDM + +A + K+M D
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDA 535
Query: 451 FIWTAMIVGLAINGH---GEEALTMFSNMIESSITPDDITYI 489
+W A++ +G+ G+ A ++E + + ++YI
Sbjct: 536 VVWIALLGSCRKHGNTRLGKLAADKLKELVEPT---NSMSYI 574
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 315 TRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFRE 374
+++VI +++ +A G I AR+ FD MPER+ VSWTA+I GY++ + +E LF
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 375 MQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGN 434
M +SH P+EFT+ S+LT+C + E G+ V K ++ ++ +A+I MY +C +
Sbjct: 153 M-LSHCFPNEFTLSSVLTSCRY----EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHD 207
Query: 435 ---VEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGV 491
+A F+ + K+ W +MI G++A+ +F M + D T + +
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Query: 492 LSA 494
S+
Sbjct: 268 CSS 270
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 274/462 (59%), Gaps = 4/462 (0%)
Query: 196 FSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTL 255
S G VD A+K + WN ++ G++ G+ P+ +T
Sbjct: 52 LSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTY 111
Query: 256 VLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKT 315
++ + S+L++ G ++ + + +E +L + N L+ M+G+ + +A+ +FD M
Sbjct: 112 PFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPH 171
Query: 316 RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM 375
+++++W SI+ +A +G + AR FD+M ERD V+W++MIDGY++ + +AL +F +M
Sbjct: 172 KNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM 231
Query: 376 -QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGN 434
+M K +E TMVS++ ACAHLGAL G+ V YI + + ++LIDMY KCG+
Sbjct: 232 MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGS 291
Query: 435 VEKARKTF--KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVL 492
+ A F + + D +W A+I GLA +G E+L +F M ES I PD+IT++ +L
Sbjct: 292 IGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLL 351
Query: 493 SACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPN 552
+AC+H G+V++ FF S+ + G +P HY CMVD+LSRAG +K+A D I MP+KP
Sbjct: 352 AACSHGGLVKEAWHFFKSLK-ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPT 410
Query: 553 SIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTI 612
+ G+LL C H N+ELAE K++IEL+P N YV L N+YA K++ R +R
Sbjct: 411 GSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREA 470
Query: 613 MMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLE 654
M ++G+KK G S+++++G + F+A D++H S +IYA L+
Sbjct: 471 MEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ 512
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 213/475 (44%), Gaps = 77/475 (16%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSV 116
L +CKS +L +IH+ I +GLS + F ++ ++F SGDVDYA + + P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN 73
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDH 176
+ WN +I+G+S P+ IS+Y+ ML + PD T+PFL+K + K G L
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 177 AVKLGLDSNLFVQKAFIHL-------------------------------FSLCGLVDLA 205
VK GL+ +LF+ IH+ ++ G V A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 206 HKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVS-PNSVTLVLILSACSK 264
+F+ +VVTW+ M+ GY + G S N VT+V ++ AC+
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 265 LTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVF--DNMKTRDVISWT 322
L L G V++Y+ + + ++++ L+DM+ CG + A VF ++K D + W
Sbjct: 254 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 313
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKP 382
+I+ G A+ G I RE+L LF +M+ S + P
Sbjct: 314 AIIGGLASHGFI-------------------------------RESLQLFHKMRESKIDP 342
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
DE T + +L AC+H G ++ + ++ + + ++D+ + G V+ A
Sbjct: 343 DEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFI 402
Query: 443 KEMHQKDKFIWTAMIVGLAING---HG--EEALTMFSNMIESSITP-DDITYIGV 491
EM K T ++G +NG HG E A T+ +IE + P +D Y+G+
Sbjct: 403 SEMPIKP----TGSMLGALLNGCINHGNLELAETVGKKLIE--LQPHNDGRYVGL 451
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 220/738 (29%), Positives = 352/738 (47%), Gaps = 79/738 (10%)
Query: 61 CKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWN 120
C K IHS IK+G+SS N ++A + G++D+A + F + V WN
Sbjct: 194 CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAV--YAKCGELDFATKFFRRMRERDVIAWN 251
Query: 121 TMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKL 180
+++ Y + + + + M I P T+ L+ G+ + GK D A+
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN-----QLGKC--DAAM-- 302
Query: 181 GLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXX 240
DL K+ G +V TW M+SG
Sbjct: 303 ----------------------DLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 241 XXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGAC 300
GV PN+VT++ +SACS L + G+ V+ + ++++ N L+DM+ C
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 301 GEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY----VSWTAMI 356
G+++ A+ VFD++K +DV +W S+++G+ G A + F +M + + ++W MI
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 357 DGYLR-------MNHFR-----------------------------EALALFREMQMSHV 380
GY++ M+ F+ EAL LFR+MQ S
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 381 KPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARK 440
P+ T++S+L ACA+L ++ + + + ++ + +AL D Y K G++E +R
Sbjct: 521 MPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRT 580
Query: 441 TFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGM 500
F M KD W ++I G ++G AL +F+ M ITP+ T ++ A G
Sbjct: 581 IFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGN 640
Query: 501 VEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
V++G+K F S+ + I P + H MV L RA L+EAL I M ++ + +W S L
Sbjct: 641 VDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFL 700
Query: 561 GACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKK 620
CR+H ++++A AA+ + LEPEN + ++ IYA + E + +KK
Sbjct: 701 TGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKK 760
Query: 621 TPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEED 680
G S +E+ +I+ F GDQS + +Y +E M + L N D L I EE
Sbjct: 761 PLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSR-LDN---RSDQYNGELWIEEEG 816
Query: 681 KETALFRHSEKLAIAYALISSGPG--VTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRD 738
+E HSEK A+A+ LISS TIRI+KNLRMC DCH AK VSK Y ++++ D
Sbjct: 817 REETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLED 876
Query: 739 KTRFHHFRHGVCSCNNFW 756
HHF++G CSC ++W
Sbjct: 877 TRCLHHFKNGDCSCKDYW 894
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 233/518 (44%), Gaps = 73/518 (14%)
Query: 53 TPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
T + LLE C + + + GL ++P + + G + AR+VFD++
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR 142
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
++F W+ MI YSR + + ++ LM+ + PD F FP +L+G N ++ GKV
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
+ +KLG+ S L V + + +++ CG +D A K F +V+ WN +L Y +
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ--- 259
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENV 292
G +V LV + EGI P LV N+
Sbjct: 260 -------------NGKHEEAVELVKEME------------------KEGI-SPGLVTWNI 287
Query: 293 LLDMFGACGEMDAAKGVFDNMK----TRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
L+ + G+ DAA + M+ T DV +WT+++SG + G +Y
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM-----RY-------- 334
Query: 349 YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKT 408
+AL +FR+M ++ V P+ T++S ++AC+ L + G V +
Sbjct: 335 ------------------QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS 376
Query: 409 YIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEE 468
K +D +G++L+DMY KCG +E ARK F + KD + W +MI G G+ +
Sbjct: 377 IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGK 436
Query: 469 ALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMV 528
A +F+ M ++++ P+ IT+ ++S G + F M ++ N + ++
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Query: 529 DLLSRAGHLKEALDVILNMPVK---PNSIVWGSLLGAC 563
+ G EAL++ M PNS+ SLL AC
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 11/300 (3%)
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
DV T ++S +A G I ARK FD M ER+ +W+AMI Y R N +RE LFR M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
V PD+F IL CA+ G +E G+ + + + K +++ + ++++ +Y KCG ++
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 437 KARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACT 496
A K F+ M ++D W ++++ NG EEA+ + M + I+P +T+ ++
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 497 HAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM---PVKPNS 553
G + M GI +V + M+ L G +ALD+ M V PN+
Sbjct: 294 QLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 554 IVWGSLLGACR----VHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREV 609
+ S + AC +++ E+ +A K + G+ L ++Y+ C + E+ R+V
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS---LVDMYSKCGKLEDARKV 409
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 322 bits (825), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 185/593 (31%), Positives = 314/593 (52%), Gaps = 37/593 (6%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
KQIH+ ++ GL D N +I + G V A ++F+ +P+ ++ W T++ GY
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLID--SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK 326
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ + K + ++ M +KPD + +L + AL +G + + +K L ++ +
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V + I +++ C + A K+F++ A +VV +N M+ GY+R+
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 248 ---VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMD 304
+ P+ +T V +L A + LT L ++ + + + ++ + L+D++ C +
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 305 AAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
++ VFD MK +D++ W S M GY++ +
Sbjct: 507 DSRLVFDEMKVKDLVIWNS-------------------------------MFAGYVQQSE 535
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSA 424
EAL LF E+Q+S +PDEFT +++TA +L +++LG+ + K + + +I +A
Sbjct: 536 NEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNA 595
Query: 425 LIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPD 484
L+DMY KCG+ E A K F +D W ++I A +G G++AL M M+ I P+
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPN 655
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
IT++GVLSAC+HAG+VE G K F M ++ GI+P HY CMV LL RAG L +A ++I
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELI 714
Query: 545 LNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWE 604
MP KP +IVW SLL C NVELAE AA+ I +P++ + +L NIYA+ W
Sbjct: 715 EKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWT 774
Query: 605 NLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMM 657
++VR M G+ K PG S + +N ++ F++ D+SH ++ +IY L++++
Sbjct: 775 EAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 223/506 (44%), Gaps = 55/506 (10%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRI 129
+H + I GL D N +I +G + YAR+VF+ +P ++ W+TM+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINL--YSRAGGMVYARKVFEKMPERNLVSWSTMVS----- 118
Query: 130 SCPKSGI---SMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK------VLLDHAVKL 180
+C GI S+ + + + DS ++L F + G+ L VK
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPN-EYILSSFIQACSGLDGRGRWMVFQLQSFLVKS 177
Query: 181 GLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXX 240
G D +++V I + G +D A +F+ VTW M+SG ++
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 241 XXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGAC 300
V P+ L +LSACS L L GG ++ ++ +E + + NVL+D + C
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 301 GEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYL 360
G + AA K F+ MP ++ +SWT ++ GY
Sbjct: 298 GRVIAA-------------------------------HKLFNGMPNKNIISWTTLLSGYK 326
Query: 361 RMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTF 420
+ +EA+ LF M +KPD + SILT+CA L AL G V Y K + ND++
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 421 IGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVG---LAINGHGEEALTMFSNMI 477
+ ++LIDMY KC + ARK F D ++ AMI G L EAL +F +M
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 478 ESSITPDDITYIGVLSACTHAGMVEKG-RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
I P +T++ +L A A + G K + ++G+ ++ ++D+ S
Sbjct: 447 FRLIRPSLLTFVSLLRAS--ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC 504
Query: 537 LKEALDVILNMPVKPNSIVWGSLLGA 562
LK++ V M VK + ++W S+
Sbjct: 505 LKDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 191/422 (45%), Gaps = 33/422 (7%)
Query: 154 FPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGD 213
F LL+ +D L Y V+ + GL+ + ++ I+L+S G + A K+F
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 214 AWEVVTWNVMLSGYNRVXXXXXXXXXXXXX-XXXGVSPNSVTLVLILSACSKLTDLAGGN 272
+V+W+ M+S N SPN L + ACS L D G
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL-DGRGRW 165
Query: 273 YVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTG 332
V+Q +++ L+ K FD RDV T ++ + G
Sbjct: 166 MVFQ------------LQSFLV------------KSGFD----RDVYVGTLLIDFYLKDG 197
Query: 333 QIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILT 392
ID AR FD +PE+ V+WT MI G ++M +L LF ++ +V PD + + ++L+
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 393 ACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFI 452
AC+ L LE G+ + +I + + D + + LID Y KCG V A K F M K+
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 453 WTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMT 512
WT ++ G N +EA+ +F++M + + PD +L++C + G + A T
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA-YT 376
Query: 513 IQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL-GACRVHKNVEL 571
I+ + + ++D+ ++ L +A V ++ + +++ +++ G R+ EL
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKV-FDIFAAADVVLFNAMIEGYSRLGTQWEL 435
Query: 572 AE 573
E
Sbjct: 436 HE 437
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 17/339 (5%)
Query: 53 TPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVI---AFC-CTQESGDVDYAR 105
T +SLL S L KQIH K GL+ D G+ +I + C C ++S R
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS------R 509
Query: 106 QVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDM 165
VFD + + IWN+M GY + S + ++++L + +PD FTF ++ N
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 166 ALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLS 225
+++ G+ +K GL+ N ++ A + +++ CG + AHK F+ + +VV WN ++S
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 226 GYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEP 285
Y G+ PN +T V +LSACS + G ++ + +EP
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEP 689
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTRD-VISWTSIVSGFANTGQIDLARKYFDQM 344
++ + G G ++ A+ + + M T+ I W S++SG A G ++LA +
Sbjct: 690 ETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMA 749
Query: 345 ---PERDYVSWTAMIDGYLRMNHFREALALFREMQMSHV 380
+D S+T + + Y + EA + M++ V
Sbjct: 750 ILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGV 788
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 321 bits (823), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 253/414 (61%), Gaps = 5/414 (1%)
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGA-CGEMDAAKG 308
PN L+L + L+ V+ +L + +V++ LL + + + A+
Sbjct: 124 PNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQ 183
Query: 309 VFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREA 368
+FD M R+V+SWT+++SG+A +G I A F+ MPERD SW A++ + F EA
Sbjct: 184 LFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEA 243
Query: 369 LALFREM-QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
++LFR M ++P+E T+V +L+ACA G L+L + + + + +++D F+ ++L+D
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD 303
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE---SSITPD 484
+Y KCGN+E+A FK +K W +MI A++G EEA+ +F M++ + I PD
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPD 363
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
IT+IG+L+ACTH G+V KGR +F MT + GI+P + HYGC++DLL RAG EAL+V+
Sbjct: 364 HITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVM 423
Query: 545 LNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWE 604
M +K + +WGSLL AC++H +++LAE+A K ++ L P NG ++ N+Y WE
Sbjct: 424 STMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWE 483
Query: 605 NLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQ 658
R R ++ + K PG S +E++ +++F + D+SHP+++EIY L++++
Sbjct: 484 EARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 221/525 (42%), Gaps = 86/525 (16%)
Query: 42 SSHCDPHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDV 101
SSH + +++ + + LKQ+ S I GLS K++ FC T ++
Sbjct: 15 SSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFC-TLRLCNL 73
Query: 102 DYARQVFDTIPHPSVFIWNTMIKGYSRISCP---KSGISMYLLMLAHNI-KPDSFTFPFL 157
YAR +FD P+ ++ ++ YS S P S S + LM+ ++ +P+ F +P +
Sbjct: 74 SYARFIFDRFSFPNTHLYAAVLTAYSS-SLPLHASSAFSFFRLMVNRSVPRPNHFIYPLV 132
Query: 158 LKGFTNDMALKYGKVLL-DHAVKLGLDSNLFVQKAFIHLF-SLCGLVDLAHKIFNMGDAW 215
LK T ++ + L+ H K G + VQ A +H + S + LA ++F+
Sbjct: 133 LKS-TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 216 EVVTWNVMLSGYNRV--------------------------------XXXXXXXXXXXXX 243
VV+W MLSGY R
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 244 XXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEM 303
+ PN VT+V +LSAC++ L ++ + + ++ + N L+D++G CG +
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 304 DAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMN 363
+ A VF + + +W S+++ FA G+ +
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSE---------------------------- 343
Query: 364 HFREALALFREM---QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID--KNKINND 418
EA+A+F EM ++ +KPD T + +L AC H G + G + Y D N+ +
Sbjct: 344 ---EAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKG---RGYFDLMTNRFGIE 397
Query: 419 TFIG--SALIDMYFKCGNVEKARKTFKEMHQK-DKFIWTAMIVGLAINGHGEEALTMFSN 475
I LID+ + G ++A + M K D+ IW +++ I+GH + A N
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 476 MIESSITPDDITYIGVLSACT-HAGMVEKGRKFFASMTIQHGIKP 519
++ ++ P++ Y+ +++ G E+ R+ + Q+ KP
Sbjct: 458 LV--ALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKP 500
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 321 bits (823), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 319/609 (52%), Gaps = 40/609 (6%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMG-LSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPH 113
IS L+R + QIH+ I G L + +IA C G++ YAR+VFD +P
Sbjct: 26 ISKLKR-----HITQIHAFVISTGNLLNGSSISRDLIASC--GRIGEISYARKVFDELPQ 78
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
V ++N+MI YSR P + +Y M+A I+PDS TF +K + + L+ G+ +
Sbjct: 79 RGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAV 138
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXX 233
AV G +++FV + ++L+ CG +D A +F +V+ W M++G+ +
Sbjct: 139 WCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKS 198
Query: 234 XXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVL 293
G + V ++ +L A L D G V+ YL + N+V+E L
Sbjct: 199 LKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSL 258
Query: 294 LDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWT 353
+DM+ A G I++A + F +M + VSW
Sbjct: 259 VDMY-------------------------------AKVGFIEVASRVFSRMMFKTAVSWG 287
Query: 354 AMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 413
++I G+ + +A EMQ +PD T+V +L AC+ +G+L+ G V YI K
Sbjct: 288 SLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR 347
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMF 473
+ D +AL+DMY KCG + +R+ F+ + +KD W MI I+G+G+E +++F
Sbjct: 348 HVL-DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLF 406
Query: 474 SNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSR 533
M ES+I PD T+ +LSA +H+G+VE+G+ +F+ M ++ I+P+ HY C++DLL+R
Sbjct: 407 LKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLAR 466
Query: 534 AGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLL 593
AG ++EALD+I + + +W +LL C H+N+ + ++AA +I++L P++ + L+
Sbjct: 467 AGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLV 526
Query: 594 CNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKL 653
N +A +W+ + +VR +M ++K PG S +E+NG + F+ D SH + + L
Sbjct: 527 SNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVL 586
Query: 654 ENMMQDLTN 662
N+ ++ +
Sbjct: 587 RNLKTEIRD 595
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/573 (31%), Positives = 300/573 (52%), Gaps = 73/573 (12%)
Query: 53 TPISLL---ERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQ-ESGDVDYARQVF 108
TP+ +L ER KS +++Q H+ +K GL D +K++AF T E V YA +
Sbjct: 38 TPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSIL 97
Query: 109 DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALK 168
+ I P+ F N++I+ Y+ S P+ ++++ ML + PD ++F F+LK +
Sbjct: 98 NRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 157
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
G+ + +K GL +++FV+ ++++ G ++A K+ + + V+WN +LS Y
Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYL 217
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
L D A + L + + E N+
Sbjct: 218 E---------------------------------KGLVDEA------RALFDEMEERNVE 238
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
N ++ + A G + AK VFD+M RDV+SW ++V+ +A+ G + + F++M
Sbjct: 239 SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM---- 294
Query: 349 YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKT 408
+ S KPD FT+VS+L+ACA LG+L GEWV
Sbjct: 295 --------------------------LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 409 YIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEE 468
YIDK+ I + F+ +AL+DMY KCG ++KA + F+ ++D W ++I L+++G G++
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 469 ALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMV 528
AL +FS M+ P+ IT+IGVLSAC H GM+++ RK F M+ + ++P + HYGCMV
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMV 448
Query: 529 DLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGS 588
DLL R G ++EA +++ +P SI+ SLLGAC+ +E AE A +++EL + S
Sbjct: 449 DLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSS 508
Query: 589 VYVLLCNIYAACKRWENLREVRTIMMERGIKKT 621
Y + N+YA+ RWE + + R M + ++
Sbjct: 509 GYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 321 bits (822), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/650 (29%), Positives = 330/650 (50%), Gaps = 79/650 (12%)
Query: 94 CTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFT 153
C + S VD ARQ+F + S++ WNT++K SR + + + M KPD+FT
Sbjct: 4 CRKFSSSVD-ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFT 62
Query: 154 FPFLLKGFTNDMALKYGKVLLDHAVK-LGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMG 212
P LK + YG+++ K + L S+L+V + I+++ CG + A ++F+
Sbjct: 63 LPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 122
Query: 213 DAWEVVTWNVMLSGYNRVXX-XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGG 271
+ ++VTW+ M+SG+ + V+P+ VTL+ ++SAC+KL++ G
Sbjct: 123 EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLG 182
Query: 272 NYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANT 331
V+ ++ +L + N LL+ + A +F + +DVISW+++++ +
Sbjct: 183 RCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN 242
Query: 332 GQIDLARKYFDQMP---------------------------------------ERDYVSW 352
G A F+ M E +
Sbjct: 243 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 302
Query: 353 TAMIDGYLRMNHFREALALFREMQ------------------MSH--------------V 380
TA++D Y++ EA A+F + M+H
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 381 KPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARK 440
+PD MV +L +C+ LG LE + +Y+ K +++ FIG++L+++Y +CG++ A K
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 441 TFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS-ITPDDITYIGVLSACTHAG 499
F + KD +WT++I G I+G G +AL F++M++SS + P+++T++ +LSAC+HAG
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Query: 500 MVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSL 559
++ +G + F M + + PN+ HY +VDLL R G L A+++ MP P + G+L
Sbjct: 483 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTL 542
Query: 560 LGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIK 619
LGACR+H+N E+AE AK++ ELE + Y+L+ N+Y WEN+ ++R + +RGIK
Sbjct: 543 LGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIK 602
Query: 620 KTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLE----NMMQDLTNAGY 665
K SL+E+ ++ FVA D+ HP+ + +Y L+ +M +DL N Y
Sbjct: 603 KGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKEDLENCVY 652
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 192/436 (44%), Gaps = 46/436 (10%)
Query: 53 TPISLLERCK--STYQLKQ-IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
T I+L+ C S +L + +H I+ G S+D N ++ C +S A +F
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN--CYAKSRAFKEAVNLFK 222
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
I V W+T+I Y + + ++ M+ +P+ T +L+ L+
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN- 228
G+ + A++ GL++ + V A + ++ C + A+ +F+ +VV+W ++SG+
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
P+++ +V +L +CS+L L + Y+ + + N
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPF 402
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
+ L++++ CG + A VF+ + +D + WTS+++G+ G+ A + F+ M
Sbjct: 403 IGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM---- 458
Query: 349 YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV-K 407
++ S VKP+E T +SIL+AC+H G + G + K
Sbjct: 459 --------------------------VKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 492
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGL-----AI 462
++ ++ + + L+D+ + G+++ A + K M F T I+G I
Sbjct: 493 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM----PFSPTPQILGTLLGACRI 548
Query: 463 NGHGEEALTMFSNMIE 478
+ +GE A T+ + E
Sbjct: 549 HQNGEMAETVAKKLFE 564
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 216/724 (29%), Positives = 327/724 (45%), Gaps = 65/724 (8%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
QIH +K G + N +++ D ++FD IP V WNT++ +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 129 ISCPKSGISMYLLM-LAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
++ M DSFT LL T+ L G+ L A+++GL L
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 188 VQKAFIHLFSLC-------------------------------GLVDLAHKIFNMGDAWE 216
V A I +S G+VD A +IF
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
+T+N +++G+ R GV +L + AC +++ ++
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDL 336
+ + N ++ LLDM C M A+ +FD W S + T
Sbjct: 442 FCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ--------WPSNLDSSKAT----- 488
Query: 337 ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALF-REMQMSHVKPDEFTMVSILTACA 395
T++I GY R +A++LF R + + DE ++ IL C
Sbjct: 489 ----------------TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCG 532
Query: 396 HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTA 455
LG E+G + Y K +D +G++LI MY KC + + A K F M + D W +
Sbjct: 533 TLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNS 592
Query: 456 MIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSAC--THAGMVEKGRKFFASMTI 513
+I + +G+EAL ++S M E I PD IT V+SA T + + R F SM
Sbjct: 593 LISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKT 652
Query: 514 QHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAE 573
+ I+P HY V +L G L+EA D I +MPV+P V +LL +CR+H N +A+
Sbjct: 653 IYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAK 712
Query: 574 MAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGII 633
AK I+ +PE S Y+L NIY+A W +R M ERG +K P S + I
Sbjct: 713 RVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKI 772
Query: 634 YEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLA 693
+ F A D SHPQ K+IY LE ++ + GY P+T V ++ E K++ LF HS KLA
Sbjct: 773 HSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLA 832
Query: 694 IAYALISSGP-GVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSC 752
+ Y ++SS G +R++KN+ +C DCH+ K +S RE+V+RD + FHHF +G CSC
Sbjct: 833 VTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSC 892
Query: 753 NNFW 756
+ W
Sbjct: 893 RDLW 896
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/472 (20%), Positives = 217/472 (45%), Gaps = 15/472 (3%)
Query: 107 VFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLML-AHNIKPDSFTFPFLLKGFTNDM 165
VF ++ P+V + +I G+SR++ + ++ M A ++P+ +TF +L
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVS 195
Query: 166 ALKYGKVLLDHAVKLGLDSNLFVQKAFIHLF-----SLCGLVDLAHKIFNMGDAWEVVTW 220
G + VK G +++FV + + L+ S C D K+F+ +V +W
Sbjct: 196 RFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC---DDVLKLFDEIPQRDVASW 252
Query: 221 NVMLSGYNRV-XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLT 279
N ++S + G +S TL +LS+C+ + L G ++
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAI 312
Query: 280 EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARK 339
+ L + N L+ + +M + +++ M +D +++T +++ + + G +D A +
Sbjct: 313 RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVE 372
Query: 340 YFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGA 399
F + E++ +++ A++ G+ R H +AL LF +M V+ +F++ S + AC +
Sbjct: 373 IFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSE 432
Query: 400 LELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE--MHQKDKFIWTAMI 457
++ E + + K + I +AL+DM +C + A + F + + T++I
Sbjct: 433 KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSII 492
Query: 458 VGLAINGHGEEALTMF-SNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
G A NG ++A+++F + E + D+++ +L+ C G E G + ++ G
Sbjct: 493 GGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHC-YALKAG 551
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKN 568
+++ ++ + ++ +A+ I N + + I W SL+ + +N
Sbjct: 552 YFSDISLGNSLISMYAKCCDSDDAIK-IFNTMREHDVISWNSLISCYILQRN 602
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 156/329 (47%), Gaps = 15/329 (4%)
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSH-VK 381
+++S + G A F + VS+TA+I G+ R+N EAL +F M+ + V+
Sbjct: 119 ALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQ 178
Query: 382 PDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFK--CGNVEKAR 439
P+E+T V+ILTAC + LG + I K+ N F+ ++L+ +Y K + +
Sbjct: 179 PNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL 238
Query: 440 KTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE-SSITPDDITYIGVLSACTHA 498
K F E+ Q+D W ++ L G +A +F M D T +LS+CT +
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 499 GMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGS 558
++ +GR+ I+ G+ ++ ++ S+ +K+ ++ + M + +++ +
Sbjct: 299 SVLLRGRELHGR-AIRIGLMQELSVNNALIGFYSKFWDMKK-VESLYEMMMAQDAVTFTE 356
Query: 559 LLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVR--TIMMER 616
++ A + + + + A + + +N Y L + C+ L+ ++ T M++R
Sbjct: 357 MITA---YMSFGMVDSAVEIFANVTEKNTITYNAL--MAGFCRNGHGLKALKLFTDMLQR 411
Query: 617 GIKKT--PGCSLMEMNGIIYEFVAGDQSH 643
G++ T S ++ G++ E +Q H
Sbjct: 412 GVELTDFSLTSAVDACGLVSEKKVSEQIH 440
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPH--PSVFIWNTMIKG 125
+QIH IK G + +P ++ C E + A ++FD P S ++I G
Sbjct: 437 EQIHGFCIKFGTAFNPCIQTALLDMCTRCER--MADAEEMFDQWPSNLDSSKATTSIIGG 494
Query: 126 YSRISCPKSGISMYLLML-AHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDS 184
Y+R P +S++ L + D + +L + G + +A+K G S
Sbjct: 495 YARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFS 554
Query: 185 NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXX 244
++ + + I +++ C D A KIFN +V++WN ++S Y
Sbjct: 555 DISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMN 614
Query: 245 XXGVSPNSVTLVLILSA 261
+ P+ +TL L++SA
Sbjct: 615 EKEIKPDIITLTLVISA 631
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 175/584 (29%), Positives = 299/584 (51%), Gaps = 34/584 (5%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+ IH+ +K G D V + ++ + + + QVFD +P V WNT+I +
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGM--YAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ + + ++ M + +P+S + + + + L+ GK + VK G + + +
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V A + ++ C +++A ++F +V WN M+ GY G
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
P+ TL IL ACS+ +L G +++ Y+ +V ++ + L+D++ CGE + A+
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
VF Q D+A SW MI Y+ + ++ +
Sbjct: 365 TVFSKT-------------------QKDVAE------------SWNVMISSYISVGNWFK 393
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
A+ ++ +M VKPD T S+L AC+ L ALE G+ + I ++++ D + SAL+D
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLD 453
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
MY KCGN ++A + F + +KD WT MI +G EAL F M + + PD +T
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
+ VLSAC HAG++++G KFF+ M ++GI+P + HY CM+D+L RAG L EA ++I
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQT 573
Query: 548 P-VKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENL 606
P N+ + +L AC +H L + A+ ++E P++ S Y++L N+YA+ + W+
Sbjct: 574 PETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAA 633
Query: 607 REVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIY 650
R VR M E G++K PGCS +EM+ + F A D+SH +++ +Y
Sbjct: 634 RRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVY 677
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/556 (24%), Positives = 257/556 (46%), Gaps = 51/556 (9%)
Query: 55 ISLLERC----KSTYQLKQIHSKTIKMGLSSDPVFGNKVIA--FCCTQESGDVDYARQVF 108
+SLL C KS ++K +H + + +GL D V +I F C AR VF
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCS----ARHVF 62
Query: 109 DTIP-HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNI-KPDSFTFPFLLKGFTNDMA 166
+ V+IWN+++ GYS+ S + ++ +L +I PDSFTFP ++K +
Sbjct: 63 ENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 167 LKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG 226
G+++ VK G ++ V + + +++ L + + ++F+ +V +WN ++S
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN 286
+ + G PNSV+L + +SACS+L L G +++ + E +
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 287 LVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
+ + L+DM+G C ++ A+ VF M + +++W S
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNS----------------------- 279
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
MI GY+ + + + M + +P + T+ SIL AC+ L G+++
Sbjct: 280 --------MIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHG 466
Y+ ++ +N D ++ +LID+YFKCG A F + + W MI G+
Sbjct: 332 HGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNW 391
Query: 467 EEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGC 526
+A+ ++ M+ + PD +T+ VL AC+ +EKG++ S++ + ++ +
Sbjct: 392 FKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS-ESRLETDELLLSA 450
Query: 527 MVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVE--LAEMAAKQIIELEP 584
++D+ S+ G+ KEA + ++P K + + W ++ A H L + Q L+P
Sbjct: 451 LLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 585 ENGSVYVLLCNIYAAC 600
+ V L + +AC
Sbjct: 510 DG----VTLLAVLSAC 521
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 10/295 (3%)
Query: 316 RDVISWTSIVSGFANTGQIDLARKYFDQMPER-DYVSWTAMIDGYLRMNHFREALALF-R 373
RDV+ S+++ + AR F+ R D W +++ GY + + F + L +F R
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 374 EMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCG 433
+ S PD FT +++ A LG LG + T + K+ D + S+L+ MY K
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 434 NVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLS 493
E + + F EM ++D W +I +G E+AL +F M S P+ ++ +S
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 494 ACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNS 553
AC+ +E+G++ ++ G + + +VD+ + L+ A +V MP K +
Sbjct: 217 ACSRLLWLERGKEIHRK-CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK-SL 274
Query: 554 IVWGSLL-GACRVHKNVELAEMAAKQIIE-LEPENGSVYVLLCNIYAACKRWENL 606
+ W S++ G + E+ + IIE P + L +I AC R NL
Sbjct: 275 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT----LTSILMACSRSRNL 325
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 309/607 (50%), Gaps = 44/607 (7%)
Query: 53 TPISLLERC---KSTYQLKQIHSKTIKMGLSSD-PVFGNKVIAFCCTQESGDVDYARQVF 108
T I+ L+RC K +QIH ++ G D P G ++ + G + A VF
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNM--YAKCGLMRRAVLVF 119
Query: 109 DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALK 168
VF +N +I G+ P + Y M A+ I PD +TFP LLKG ++ M L
Sbjct: 120 GG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELS 177
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN-MGDAWEVVTWNVMLSGY 227
K + A KLG DS+ +V + +S V+ A K+F+ + D + V WN +++GY
Sbjct: 178 DVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY 237
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
+++ GV + T+ +LSA + D+ G ++ + ++
Sbjct: 238 SQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDI 297
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER 347
V+ N L+DM+G ++ A +F+ M ER
Sbjct: 298 VVSNALIDMYGKSKWLEEANSIFE-------------------------------AMDER 326
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
D +W +++ + LALF M S ++PD T+ ++L C L +L G +
Sbjct: 327 DLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIH 386
Query: 408 TYIDK----NKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAIN 463
Y+ N+ +++ FI ++L+DMY KCG++ AR F M KD W MI G +
Sbjct: 387 GYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQ 446
Query: 464 GHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTH 523
GE AL MFS M + + PD+IT++G+L AC+H+G + +GR F A M + I P H
Sbjct: 447 SCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDH 506
Query: 524 YGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELE 583
Y C++D+L RA L+EA ++ ++ P+ N +VW S+L +CR+H N +LA +A K++ ELE
Sbjct: 507 YACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELE 566
Query: 584 PENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSH 643
PE+ YVL+ N+Y ++E + +VR M ++ +KKTPGCS + + ++ F G+Q+H
Sbjct: 567 PEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTH 626
Query: 644 PQSKEIY 650
P+ K I+
Sbjct: 627 PEFKSIH 633
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 193/661 (29%), Positives = 328/661 (49%), Gaps = 53/661 (8%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIA---FCCTQESGDVDYARQVFDTIPH 113
LL C + Q +Q+H++ L SD +F + +A G + AR VF+T+
Sbjct: 62 LLGLCLTAQQCRQVHAQV----LLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSL 117
Query: 114 ---PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYG 170
+ +WN+++K ++ + +Y M + D + P +L+
Sbjct: 118 VLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLC 177
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRV 230
+ +++GL NL V + L+ G + A+ +F ++WNVM+ G+++
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQE 237
Query: 231 XXXXXXXXXXXXXXXXGVSPNSVT-----------------------------------L 255
P+ VT L
Sbjct: 238 YDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEAL 297
Query: 256 VLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKT 315
+ S C++L L+ V+ Y+ +G E L N L+ ++G G++ A+ +F ++
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 316 RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV--------SWTAMIDGYLRMNHFRE 367
+ + SW S+++ F + G++D A F ++ E ++V +WT++I G +
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
+L FR+MQ S V + T+ IL+ CA L AL LG + ++ + ++ + + +AL++
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVN 477
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
MY KCG + + F+ + KD W ++I G ++G E+AL+MF MI S PD I
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIA 537
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
+ VLSAC+HAG+VEKGR+ F SM+ + G++P HY C+VDLL R G LKEA +++ NM
Sbjct: 538 LVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Query: 548 PVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLR 607
P++P V G+LL +CR+HKNV++AE A Q+ LEPE Y+LL NIY+A RWE
Sbjct: 598 PMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESA 657
Query: 608 EVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSP 667
VR + ++ +KK G S +E+ Y+F +G + + IY LE+++ + G +
Sbjct: 658 NVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTH 717
Query: 668 D 668
D
Sbjct: 718 D 718
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 131/304 (43%), Gaps = 37/304 (12%)
Query: 421 IGSALIDMYFKCGNVEKARKTFKEMHQ---KDKFIWTAMIVGLAINGHGEEALTMFSNMI 477
+ + LI +Y + G + AR F+ + D +W +++ +G E AL ++ M
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 478 ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL 537
+ +T D +L AC + G R F + IQ G+K N+ ++ L +AG +
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFH-TQVIQIGLKENLHVVNELLTLYPKAGRM 209
Query: 538 KEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAK--QIIELEPENGS-VYVLLC 594
+A ++ + MPV+ N + W ++ + E A + Q E +P+ + VL C
Sbjct: 210 GDAYNLFVEMPVR-NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSC 268
Query: 595 NIYAACKRWENLREVRTIMMERGIKKTPG---------CSLMEMNGII-----YEFVAGD 640
++ C ++E++ + +M G G C+ +E I Y G
Sbjct: 269 --HSQCGKFEDVLKYFHLMRMSG-NAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGF 325
Query: 641 QSHPQSK----EIYAK------LENMMQDLTNAGYSPDTSEV--FLDIGEEDKETALFRH 688
+ + S+ +Y K E++ + + N G S + F+D G+ D+ +LF
Sbjct: 326 EEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSE 385
Query: 689 SEKL 692
E++
Sbjct: 386 LEEM 389
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/577 (31%), Positives = 304/577 (52%), Gaps = 76/577 (13%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSV 116
L + CK+ LKQIH+ + GL S+ ++I G + YA ++FD IP P V
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDH 176
I N +++G ++ P+ +S+Y M + PD +TF F+LK + G
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 177 AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXX 236
V+ G N +V+ A I + CG + +A ++F+ V W+ M SGY +
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAK------- 190
Query: 237 XXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDM 296
G L + + + V NV++
Sbjct: 191 --------------------------------RGKIDEAMRLFDEMPYKDQVAWNVMITG 218
Query: 297 FGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMI 356
C EMD+A+ +FD +DV++W +++SG+ N G
Sbjct: 219 CLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCG------------------------ 254
Query: 357 DGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYI-DKNKI 415
+ +EAL +F+EM+ + PD T++S+L+ACA LG LE G+ + YI + +
Sbjct: 255 -------YPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASV 307
Query: 416 NNDTFIGS----ALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
++ ++G+ ALIDMY KCG++++A + F+ + +D W +IVGLA++ H E ++
Sbjct: 308 SSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIE 366
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
MF M + P+++T+IGV+ AC+H+G V++GRK+F+ M + I+PN+ HYGCMVD+L
Sbjct: 367 MFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDML 426
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYV 591
RAG L+EA + +M ++PN+IVW +LLGAC+++ NVEL + A ++++ + + YV
Sbjct: 427 GRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYV 486
Query: 592 LLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLME 628
LL NIYA+ +W+ +++VR + + +KK G SL+E
Sbjct: 487 LLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 297/579 (51%), Gaps = 36/579 (6%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP-- 112
+++L + K+ +Q+H+K I G + V G+ + +S +D+A F+ IP
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTN--AYIQSNRLDFATSSFNRIPCW 68
Query: 113 HPSVFIWNTMIKGYSR--ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYG 170
+ WNT++ GYS+ C + +Y M H DSF F +K L+ G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRV 230
++ A+K GLD + +V + + +++ G ++ A K+F+ V W V++ GY +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 231 XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVME 290
G++ +++TL+ ++ AC
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACG--------------------------- 221
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV 350
NV G C + + F + D + SI+ + +D ARK F+ +R+ V
Sbjct: 222 NVFAGKVGKCVHGVSIRRSF--IDQSDYLQ-ASIIDMYVKCRLLDNARKLFETSVDRNVV 278
Query: 351 SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYI 410
WT +I G+ + EA LFR+M + P++ T+ +IL +C+ LG+L G+ V Y+
Sbjct: 279 MWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM 338
Query: 411 DKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEAL 470
+N I D ++ IDMY +CGN++ AR F M +++ W++MI ING EEAL
Sbjct: 339 IRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEAL 398
Query: 471 TMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDL 530
F M ++ P+ +T++ +LSAC+H+G V++G K F SMT +G+ P HY CMVDL
Sbjct: 399 DCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDL 458
Query: 531 LSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVY 590
L RAG + EA I NMPVKP + WG+LL ACR+HK V+LA A++++ +EPE SVY
Sbjct: 459 LGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVY 518
Query: 591 VLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEM 629
VLL NIYA WE + VR M +G +K G S E+
Sbjct: 519 VLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 292/583 (50%), Gaps = 35/583 (6%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+Q H+ +KM D ++ C ++G V+ +VF +P + + W+TM+ GY+
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYC--KAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 128 RISCPKSGISMYLLMLAHNIK-PDS-FTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+ I ++ L L + DS + F +L + + G+ + +K GL
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
+ + A + ++S C ++ A K+F+ +TW+ M++GY++
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
G+ P+ T+V +L+ACS + L G ++ +L + E +L L+DM+
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY-------- 367
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A G + ARK FD + ERD WT++I GY++ +
Sbjct: 368 -----------------------AKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
EAL L+R M+ + + P++ TM S+L AC+ L LELG+ V + K+ + IGSAL
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSAL 464
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
MY KCG++E F+ KD W AMI GL+ NG G+EAL +F M+ + PDD
Sbjct: 465 STMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
+T++ ++SAC+H G VE+G +F M+ Q G+ P V HY CMVDLLSRAG LKEA + I
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
+ + +W LL AC+ H EL A ++++ L S YV L IY A R +
Sbjct: 585 SANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRD 644
Query: 606 LREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKE 648
+ V M G+ K GCS +E+ + FV GD HP +E
Sbjct: 645 VERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE 687
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 128/564 (22%), Positives = 227/564 (40%), Gaps = 92/564 (16%)
Query: 147 IKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAH 206
+ P + T L + L G+ + ++ G + + ++ ++ CG + AH
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 207 KIFNMGDAWEVVTWNVMLSGYNR---VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
IFN +VV+WN +++GY++ + + PN+ TL I A S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 264 KLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTS 323
L G + + + ++ ++ L+ M+ G ++ VF M R+ +W++
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
+VSG+A G+++ A K F+ RE +
Sbjct: 190 MVSGYATRGRVEEAIKVFN---------------------------LFLREKEEGSDSDY 222
Query: 384 EFTMV-SILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
FT V S L A ++G LG + KN + + +AL+ MY KC ++ +A K F
Sbjct: 223 VFTAVLSSLAATIYVG---LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMF 279
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVE 502
++ W+AM+ G + NG EA+ +FS M + I P + T +GVL+AC+ +E
Sbjct: 280 DSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLE 339
Query: 503 KGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA---------LDVIL-------- 545
+G++ S ++ G + ++ +VD+ ++AG L +A DV L
Sbjct: 340 EGKQLH-SFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 546 -----------------NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIE----LEP 584
+ PN S+L AC +EL + I+ LE
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV 458
Query: 585 ENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHP 644
GS L +Y+ C E+ V ++TP ++ N +I +G +
Sbjct: 459 PIGSA---LSTMYSKCGSLEDGNLV--------FRRTPNKDVVSWNAMI----SGLSHNG 503
Query: 645 QSKEIYAKLENMMQDLTNAGYSPD 668
Q E E M+ + G PD
Sbjct: 504 QGDEALELFEEMLAE----GMEPD 523
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 159/359 (44%), Gaps = 12/359 (3%)
Query: 33 APAITAKCYSSHCDPHCFGETPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKV 89
A + ++ +S+ P + T + +L C L KQ+HS +K+G +
Sbjct: 306 AVKLFSRMFSAGIKPSEY--TIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 90 IAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKP 149
+ ++G + AR+ FD + V +W ++I GY + S + + +Y M I P
Sbjct: 364 VDM--YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIP 421
Query: 150 DSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF 209
+ T +LK ++ L+ GK + H +K G + + A ++S CG ++ + +F
Sbjct: 422 NDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Query: 210 NMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLA 269
+VV+WN M+SG + G+ P+ VT V I+SACS +
Sbjct: 482 RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Query: 270 GGNYVYQYLTEGI-VEPNLVMENVLLDMFGACGEMDAAKGVFDNMKT-RDVISWTSIVSG 327
G + + +++ I ++P + ++D+ G++ AK ++ + W ++S
Sbjct: 542 RGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSA 601
Query: 328 FANTGQIDL---ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
N G+ +L A + + R+ ++ + Y + R+ +++ M+ + V +
Sbjct: 602 CKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKE 660
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 22/254 (8%)
Query: 378 SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
+ + P T++ LT + L G V I + + + L++ Y KCG + K
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 438 ARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT---MFSNMIESSITPDDITYIGVLSA 494
A F + KD W ++I G + NG + T +F M I P+ T G+ A
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 495 CTHAGMVEKGRKFFASMTIQHGIKPNVTHYG------CMVDLLSRAGHLKEALDVILNMP 548
+ GR+ H + ++ +G +V + +AG +++ L V MP
Sbjct: 128 ESSLQSSTVGRQ-------AHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 549 VKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGS----VYVLLCNIYAACKRWE 604
+ N+ W +++ VE A + + E E GS V+ + + AA
Sbjct: 181 ER-NTYTWSTMVSGYATRGRVEEA-IKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 605 NLREVRTIMMERGI 618
R++ I ++ G+
Sbjct: 239 LGRQIHCITIKNGL 252
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/608 (29%), Positives = 297/608 (48%), Gaps = 46/608 (7%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
+SG + ARQVFD +P WNTM+ YSR+ + I+++ + + KPD ++F
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN--MGDA 214
+L + +K+G+ + ++ G ++L V + I ++ C A+K+F D+
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 215 WEVVTW-------------------------------NVMLSGYNRVXXXXXXXXXXXXX 243
VTW N+M+SG+
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 244 XXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN-----LVMENVLLDMFG 298
P+ T +++ACS + N VY + ++ N + +N +L +
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSS----NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYT 251
Query: 299 ACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
G D A ++++ +SW SI+ G+ + A + F PE++ V+WT MI G
Sbjct: 252 KLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITG 311
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
Y R +AL F EM S V D F ++L AC+ L L G+ + +
Sbjct: 312 YGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY 371
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
++G+AL+++Y KCG++++A + F ++ KD W M+ ++G ++AL ++ NMI
Sbjct: 372 AYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIA 431
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
S I PD++T+IG+L+ C+H+G+VE+G F SM + I V H CM+D+ R GHL
Sbjct: 432 SGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLA 491
Query: 539 EALDVILN----MPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLC 594
EA D+ + N+ W +LLGAC H + EL +K + EP +VLL
Sbjct: 492 EAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLS 551
Query: 595 NIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLE 654
N+Y + RW+ +VR M+ERG+KKTPGCS +E+ + FV GD SHP+ +E+ L
Sbjct: 552 NLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLN 611
Query: 655 NMMQDLTN 662
+ ++ N
Sbjct: 612 CLQHEMRN 619
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 40/306 (13%)
Query: 318 VISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQM 377
++ TS ++ A +G+I AR+ FD MPE D V+W M+ Y R+ +EA+ALF +++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 378 SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
S KPD+++ +IL+ CA LG ++ G +++ + ++ + ++LIDMY KC +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 438 ARKTFK---------------------------------EMHQKDKFIWTAMIVGLAING 464
A K F+ EM ++ F W MI G A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 465 HGEEALTMFSNMIESSITPDDITYIGVLSACT-HAGMVEKGRKFFASMTIQHGIKPNVTH 523
E L++F M+ES PD T+ +++AC+ + V GR A M +++G V
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVM-LKNGWSSAVEA 242
Query: 524 YGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELE 583
++ ++ G +A+ + ++ V + W S++ AC E A ++ L
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETE----KALEVFHLA 297
Query: 584 PENGSV 589
PE V
Sbjct: 298 PEKNIV 303
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 176/440 (40%), Gaps = 83/440 (18%)
Query: 50 FGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDY------ 103
FG SL+ R L +S G SD + NKV C +V +
Sbjct: 88 FGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFA 147
Query: 104 ---------ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTF 154
A VF +P F WN MI G++ +S +S++ ML KPD +TF
Sbjct: 148 YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTF 207
Query: 155 PFLLKGFTNDMA-LKYGKVLLDHAV---------------------KLG--------LDS 184
L+ + D + + YG+++ HAV KLG L+S
Sbjct: 208 SSLMNACSADSSNVVYGRMV--HAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELES 265
Query: 185 -NLFVQKAFIHLFSLC---GLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXX 240
+ Q ++ + C G + A ++F++ +VTW M++GY R
Sbjct: 266 IEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFF 325
Query: 241 XXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGAC 300
GV + +L ACS L L G ++ L + + N L++++ C
Sbjct: 326 VEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKC 385
Query: 301 GEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYL 360
G++ A F ++ +D++SW +++ F G D
Sbjct: 386 GDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLAD------------------------- 420
Query: 361 RMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV-KTYIDKNKINNDT 419
+AL L+ M S +KPD T + +LT C+H G +E G + ++ + +I +
Sbjct: 421 ------QALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEV 474
Query: 420 FIGSALIDMYFKCGNVEKAR 439
+ +IDM+ + G++ +A+
Sbjct: 475 DHVTCMIDMFGRGGHLAEAK 494
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 129/299 (43%), Gaps = 13/299 (4%)
Query: 87 NKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN 146
N +I C + G+ + A +VF P ++ W TMI GY R + + ++ M+
Sbjct: 275 NSIIDAC--MKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSG 332
Query: 147 IKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAH 206
+ D F + +L + L +GK++ + G +V A ++L++ CG + A
Sbjct: 333 VDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEAD 392
Query: 207 KIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLT 266
+ F ++V+WN ML + G+ P++VT + +L+ CS
Sbjct: 393 RAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSG 452
Query: 267 DLAGGNYVYQYLTEGIVEPNLVMENV--LLDMFGACGEMDAAKGVFDN-----MKTRDVI 319
+ G +++ + + P L +++V ++DMFG G + AK + + +
Sbjct: 453 LVEEGCMIFESMVKDYRIP-LEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNS 511
Query: 320 SWTSIVSGFANTGQIDLAR---KYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM 375
SW +++ + +L R K + +S+ + + Y ++E + REM
Sbjct: 512 SWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREM 570
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 204/677 (30%), Positives = 319/677 (47%), Gaps = 75/677 (11%)
Query: 56 SLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
S+L C S L +QIH TIK G D N ++A + + A +F+T+
Sbjct: 130 SVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAM--YAQCKRISEAEYLFETME 187
Query: 113 -HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK 171
+ W +M+ GYS+ I + + + + +TFP +L + A + G
Sbjct: 188 GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGV 247
Query: 172 VLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVX 231
+ VK G +N++VQ A I +++ C ++ A + + +VV+WN M+ G R
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307
Query: 232 XXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKL--TDLAGGNYVYQYLTEGIVEPNLVM 289
+ + T+ IL+ C L T++ + + + + ++
Sbjct: 308 LIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLV 366
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY 349
N L+DM+ G MD+A K F+ M E+D
Sbjct: 367 NNALVDMYAKRGIMDSA-------------------------------LKVFEGMIEKDV 395
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTY 409
+SWTA++ G + EAL LF M++ + PD+ S+L+A A L LE G+ V
Sbjct: 396 ISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGN 455
Query: 410 IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEA 469
K+ + + ++L+ MY KCG++E A F M +D WT +IVG A NG
Sbjct: 456 YIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG----- 510
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVD 529
++E +++F SM +GI P HY CM+D
Sbjct: 511 ------------------------------LLEDAQRYFDSMRTVYGITPGPEHYACMID 540
Query: 530 LLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSV 589
L R+G + ++ M V+P++ VW ++L A R H N+E E AAK ++ELEP N
Sbjct: 541 LFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVP 600
Query: 590 YVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEI 649
YV L N+Y+A R + VR +M R I K PGCS +E G ++ F++ D+ HP+ EI
Sbjct: 601 YVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEI 660
Query: 650 YAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRI 709
Y+K++ MM + AGY D S D+ +E KE L HSEKLA+A+ L+ G IRI
Sbjct: 661 YSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRI 720
Query: 710 VKNLRMCVDCHQMAKLV 726
+KNLR+C DCH KL+
Sbjct: 721 IKNLRVCGDCHSAMKLL 737
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 230/525 (43%), Gaps = 75/525 (14%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMI------ 123
IHS + L S+ + G+ +SG VD ARQ+FD +P F WNTMI
Sbjct: 20 IHSYADRTKLHSNLLLGD-------LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNS 72
Query: 124 -------------------------KGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
GY + +++ M + IKP+ +T +L
Sbjct: 73 RRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVL 132
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF-NMGDAWEV 217
+ T+ + L G+ + H +K G D ++ V + +++ C + A +F M
Sbjct: 133 RMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNN 192
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
VTW ML+GY++ G N T +L+AC+ ++ G V+
Sbjct: 193 VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCC 252
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
+ + + N+ +++ L+DM+ C EM++A+ + + M+ DV+SW S++ G G I A
Sbjct: 253 IVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEA 312
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
F +M ERD +K D+FT+ SIL C L
Sbjct: 313 LSMFGRMHERD-------------------------------MKIDDFTIPSILN-CFAL 340
Query: 398 GALEL--GEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTA 455
E+ I K + +AL+DMY K G ++ A K F+ M +KD WTA
Sbjct: 341 SRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTA 400
Query: 456 MIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQH 515
++ G NG +EAL +F NM ITPD I VLSA ++E G++ + I+
Sbjct: 401 LVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNY-IKS 459
Query: 516 GIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
G +++ +V + ++ G L++A +VI N + I W L+
Sbjct: 460 GFPSSLSVNNSLVTMYTKCGSLEDA-NVIFNSMEIRDLITWTCLI 503
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 138/274 (50%), Gaps = 3/274 (1%)
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV 350
N+LL G +D A+ +FD M RD +W +++ ++N+ ++ A K F P ++ +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 351 SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYI 410
SW A+I GY + EA LF EMQ +KP+E+T+ S+L C L L GE + +
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 411 DKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEA 469
K + D + + L+ MY +C + +A F+ M +K+ WT+M+ G + NG +A
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVD 529
+ F ++ + T+ VL+AC G + + ++ G K N+ ++D
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI-VKSGFKTNIYVQSALID 270
Query: 530 LLSRAGHLKEALDVILNMPVKPNSIVWGSLLGAC 563
+ ++ ++ A ++ M V + + W S++ C
Sbjct: 271 MYAKCREMESARALLEGMEVD-DVVSWNSMIVGC 303
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/582 (29%), Positives = 296/582 (50%), Gaps = 35/582 (6%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
E G V+ AR +FD +P V W MI GY+ + + M+ P+ FT
Sbjct: 57 EKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSS 116
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGL-VDLAHKIFNMGDAW 215
+LK N L YG ++ VKLG++ +L+V A +++++ C + ++ A IF
Sbjct: 117 VLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVK 176
Query: 216 EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY 275
VTW +++G+ + + + + A + + + G ++
Sbjct: 177 NDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIH 236
Query: 276 QYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQID 335
+ + + NL + N +LD++ CG + AK
Sbjct: 237 ASVIKRGFQSNLPVMNSILDLYCRCGYLSEAK---------------------------- 268
Query: 336 LARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
YF +M ++D ++W +I R + EAL +F+ + P+ +T S++ ACA
Sbjct: 269 ---HYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACA 324
Query: 396 HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFI-WT 454
++ AL G+ + I + N + + +ALIDMY KCGN+ +++ F E+ + + WT
Sbjct: 325 NIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWT 384
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
+M++G +G+G EA+ +F M+ S I PD I ++ VLSAC HAG+VEKG K+F M +
Sbjct: 385 SMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESE 444
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHK-NVELAE 573
+GI P+ Y C+VDLL RAG + EA +++ MP KP+ WG++LGAC+ HK N ++
Sbjct: 445 YGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISR 504
Query: 574 MAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGII 633
+AA++++EL+P+ YV+L IYAA +W + VR +M G KK G S + + +
Sbjct: 505 LAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQV 564
Query: 634 YEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLD 675
+ F D+ P + +Y+ L ++++ AGY P+ + D
Sbjct: 565 FSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVND 606
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 168/367 (45%), Gaps = 27/367 (7%)
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVK 381
T+++ + G ++ AR FD+MP+RD V+WTAMI GY N+ A F EM
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 382 PDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCG-NVEKARK 440
P+EFT+ S+L +C ++ L G V + K + ++ +A+++MY C +E A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 441 TFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI--ESSITPDDITYIGVLSACTHA 498
F+++ K+ WT +I G G G L M+ M+ + +TP IT SA +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 499 GMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGS 558
V G++ AS+ I+ G + N+ ++DL R G+L EA M K + I W +
Sbjct: 229 --VTTGKQIHASV-IKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITWNT 284
Query: 559 LLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENL---REVRTIMME 615
L+ + E M Q E + + Y ++ AAC L +++ +
Sbjct: 285 LISELERSDSSEALLMF--QRFESQGFVPNCYT-FTSLVAACANIAALNCGQQLHGRIFR 341
Query: 616 RGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKL---------ENMMQDLTNAGYS 666
RG K +E+ + + A + P S+ ++ ++ +MM + GY
Sbjct: 342 RGFNKN-----VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 667 PDTSEVF 673
+ E+F
Sbjct: 397 AEAVELF 403
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 179/408 (43%), Gaps = 39/408 (9%)
Query: 56 SLLERCKSTYQLKQ---IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
S+L+ C++ L +H +K+G+ N ++ T S ++ A +F I
Sbjct: 116 SVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATC-SVTMEAACLIFRDIK 174
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
+ W T+I G++ + G+ MY ML N + + ++ + ++ GK
Sbjct: 175 VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQ 234
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
+ +K G SNL V + + L+ CG + A F+ + +++TWN ++S R
Sbjct: 235 IHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELER-SD 293
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENV 292
G PN T +++AC+ + L G ++ + N+ + N
Sbjct: 294 SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANA 353
Query: 293 LLDMFGACGEMDAAKGVFDNM-KTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
L+DM+ CG + ++ VF + R+++SWTS++ G+ + G
Sbjct: 354 LIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG------------------- 394
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKTYI 410
+ EA+ LF +M S ++PD +++L+AC H G +E G ++
Sbjct: 395 ------------YGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVME 442
Query: 411 DKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-DKFIWTAMI 457
+ IN D I + ++D+ + G + +A + + M K D+ W A++
Sbjct: 443 SEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 421 IGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS 480
+ + LI YF+ G VE+AR F EM +D WTAMI G A + + A F M++
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 481 ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA 540
+P++ T VL +C + ++ G + ++ G++ ++ M+++ + EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYG-ALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 541 LDVILNMPVKPNSIVWGSLL 560
+I N + W +L+
Sbjct: 166 ACLIFRDIKVKNDVTWTTLI 185
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 149/372 (40%), Positives = 239/372 (64%), Gaps = 3/372 (0%)
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
L+ + G + A+ VFD M RDV W ++++G+ G + A + FD MP ++ S
Sbjct: 122 TLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTS 181
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSH-VKPDEFTMVSILTACAHLGALELGEWVKTYI 410
WT +I G+ + ++ EAL +F M+ VKP+ T+VS+L ACA+LG LE+G ++ Y
Sbjct: 182 WTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYA 241
Query: 411 DKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGEEA 469
+N ++ ++ +A I+MY KCG ++ A++ F+E+ +Q++ W +MI LA +G +EA
Sbjct: 242 RENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEA 301
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVD 529
LT+F+ M+ PD +T++G+L AC H GMV KG++ F SM H I P + HYGCM+D
Sbjct: 302 LTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMID 361
Query: 530 LLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSV 589
LL R G L+EA D+I MP+KP+++VWG+LLGAC H NVE+AE+A++ + +LEP N
Sbjct: 362 LLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGN 421
Query: 590 YVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCS-LMEMNGIIYEFVAGDQSHPQSKE 648
V++ NIYAA ++W+ + +R +M + + K G S +E+ +++F D+SHP+S E
Sbjct: 422 CVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYE 481
Query: 649 IYAKLENMMQDL 660
IY LE + + +
Sbjct: 482 IYQVLEEIFRRM 493
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 178/438 (40%), Gaps = 72/438 (16%)
Query: 67 LKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
+KQ+H+ ++ G+ +++ ++ YAR++FD + F++N +I+ Y
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLLI------PNLVYARKLFDHHQNSCTFLYNKLIQAY 57
Query: 127 SRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNL 186
P I +Y L+ ++P TF F+ + + + ++L + G +S+
Sbjct: 58 YVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDS 117
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX 246
F I ++ G + A ++F+ +V WN M++GY R
Sbjct: 118 FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 247 GVS--------------------------------PNSVTLVLILSACSKLTDLAGGNYV 274
V+ PN +T+V +L AC+ L +L G +
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 275 YQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNM-KTRDVISWTSIVSGFANTGQ 333
Y E N+ + N ++M+ CG +D AK +F+ + R++ SW S++ A G+
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Query: 334 IDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA 393
D EAL LF +M KPD T V +L A
Sbjct: 298 HD-------------------------------EALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 394 CAHLGALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-DKF 451
C H G + G E K+ + +KI+ +ID+ + G +++A K M K D
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 452 IWTAMIVGLAINGHGEEA 469
+W ++ + +G+ E A
Sbjct: 387 VWGTLLGACSFHGNVEIA 404
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 310 bits (794), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 309/575 (53%), Gaps = 12/575 (2%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSS-DPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS 115
L+RC Q KQ+H++ + + +P+ ++ + F V Y +++
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHD 68
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLD 175
F W +++ S+ K + +Y+ M I P S +L+ + GK +
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 176 HAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXX 235
A+K GL ++VQ + L+S G ++LA K F+ V+WN +L GY
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLD 295
++V+ LI+S+ +K D+ GN + + P N+L+
Sbjct: 189 ARRVFDKIP----EKDAVSWNLIISSYAKKGDM--GNACSLFSAMPLKSP--ASWNILIG 240
Query: 296 MFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAM 355
+ C EM A+ FD M ++ +SW +++SG+ G + A + F M ++D + + AM
Sbjct: 241 GYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAM 300
Query: 356 IDGYLRMNHFREALALFREM--QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 413
I Y + ++AL LF +M + S+++PDE T+ S+++A + LG G WV++YI ++
Sbjct: 301 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEH 360
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMF 473
I D + ++LID+Y K G+ KA K F +++KD ++AMI+G ING EA ++F
Sbjct: 361 GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLF 420
Query: 474 SNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSR 533
+ MIE I P+ +T+ G+LSA +H+G+V++G K F SM H ++P+ HYG MVD+L R
Sbjct: 421 TAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLGR 479
Query: 534 AGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLL 593
AG L+EA ++I +MP++PN+ VWG+LL A +H NVE E+A ++LE + L
Sbjct: 480 AGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHL 539
Query: 594 CNIYAACKRWENLREVRTIMMERGIKKTPGCSLME 628
IY++ RW++ R VR + E+ + KT GCS +E
Sbjct: 540 AMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 288/581 (49%), Gaps = 41/581 (7%)
Query: 48 HCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQV 107
+C + IS R + Q+H+ K G D +I+ +SGD+D + QV
Sbjct: 351 NCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISM--YSKSGDIDLSEQV 408
Query: 108 F---DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTND 164
F D I + I N MI +S+ P I ++ ML ++ D F+ LL
Sbjct: 409 FEDLDDIQRQN--IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD-- 464
Query: 165 MALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVML 224
L GK + + +K GL +L V + L+S CG ++ ++K+F + W M+
Sbjct: 465 -CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMI 523
Query: 225 SGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
SG+N G SP+ TL +L+ CS L G ++ Y ++
Sbjct: 524 SGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGID 583
Query: 285 PNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQM 344
+ + + L++M+ CG + A+ V+D + D +S +S++SG++ G I
Sbjct: 584 KGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQ--------- 634
Query: 345 PERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGE 404
DG+L LFR+M MS D F + SIL A A LG
Sbjct: 635 ------------DGFL----------LFRDMVMSGFTMDSFAISSILKAAALSDESSLGA 672
Query: 405 WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAING 464
V YI K + + +GS+L+ MY K G+++ K F +++ D WTA+I A +G
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHG 732
Query: 465 HGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHY 524
EAL +++ M E PD +T++GVLSAC+H G+VE+ SM +GI+P HY
Sbjct: 733 KANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHY 792
Query: 525 GCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEP 584
CMVD L R+G L+EA I NM +KP+++VWG+LL AC++H VEL ++AAK+ IELEP
Sbjct: 793 VCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEP 852
Query: 585 ENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCS 625
+ Y+ L NI A W+ + E R +M G++K PG S
Sbjct: 853 SDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 208/466 (44%), Gaps = 42/466 (9%)
Query: 98 SGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFL 157
SG + A ++FDTIP P V N MI GY + + + + M + + ++ +
Sbjct: 97 SGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSV 156
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
+ + A + +++ H +K+G V+ A I +FS + A+K+F + V
Sbjct: 157 ISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANV 216
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
WN +++G R P+S T +L+AC+ L L G
Sbjct: 217 YCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGK----- 271
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
+V+ ++ CG DV T+IV +A G + A
Sbjct: 272 ----VVQARVI----------KCG-------------AEDVFVCTAIVDLYAKCGHMAEA 304
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
+ F ++P VSWT M+ GY + N AL +F+EM+ S V+ + T+ S+++AC
Sbjct: 305 MEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 398 GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ-KDKFIWTAM 456
+ V ++ K+ D+ + +ALI MY K G+++ + + F+++ + + I M
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVM 424
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSA--CTHAGMVEKGRKFFASMTIQ 514
I + + +A+ +F+ M++ + D+ + +LS C + G G T++
Sbjct: 425 ITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHG------YTLK 478
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
G+ ++T + L S+ G L+E+ + +P K N+ W S++
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMI 523
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 168/401 (41%), Gaps = 62/401 (15%)
Query: 155 PFLLKGFTNDMA------LKYGKVLLDHAVK-LGLDSNLFVQKAFIHLFSLCGLVDLAHK 207
PF F ND + L+ K+L H ++ L ++F+ K+ + +S G + A K
Sbjct: 46 PFNPFRFFNDQSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAK 105
Query: 208 IFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLT- 266
+F+ +VV+ N+M+SGY + G N ++ ++SACS L
Sbjct: 106 LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQA 165
Query: 267 ----------DLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR 316
+ G + Y+ V+E+ L+D+F + A VF + +
Sbjct: 166 PLFSELVCCHTIKMGYFFYE-----------VVESALIDVFSKNLRFEDAYKVFRDSLSA 214
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
+V W +I++ G LR ++ LF EM
Sbjct: 215 NVYCWNTIIA-------------------------------GALRNQNYGAVFDLFHEMC 243
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
+ KPD +T S+L ACA L L G+ V+ + K D F+ +A++D+Y KCG++
Sbjct: 244 VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMA 302
Query: 437 KARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACT 496
+A + F + WT M+ G + AL +F M S + ++ T V+SAC
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 497 HAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL 537
MV + + A + G + + ++ + S++G +
Sbjct: 363 RPSMVCEASQVHA-WVFKSGFYLDSSVAAALISMYSKSGDI 402
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 310 FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREAL 369
FD T+ ++SW ++N+G + A K FD +P+ D VS MI GY + F E+L
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 370 ALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMY 429
F +M + +E + S+++AC+ L A E V + K + SALID++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 430 FKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYI 489
K E A K F++ + + W +I G N + +F M PD TY
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS 255
Query: 490 GVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPV 549
VL+AC + G K + I+ G + +V +VDL ++ GH+ EA++V +P
Sbjct: 256 SVLAACASLEKLRFG-KVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIP- 312
Query: 550 KPNSIVWGSLL 560
P+ + W +L
Sbjct: 313 NPSVVSWTVML 323
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 232/377 (61%), Gaps = 6/377 (1%)
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQ 343
E ++V+ N ++ + G M A+ +FD M RDV+SW +++ G+AN G ++ + FD
Sbjct: 87 ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDD 146
Query: 344 MPERDYVSWTAMIDGYLRMNHFREALALFREM-QMSHVKPDEFTMVSILTACAHLGALEL 402
MPER+ SW +I GY + E L F+ M V P++ TM +L+ACA LGA +
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 403 GEWVKTY---IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVG 459
G+WV Y + NK+ D + +ALIDMY KCG +E A + FK + ++D W MI G
Sbjct: 207 GKWVHKYGETLGYNKV--DVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 264
Query: 460 LAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKP 519
LA +GHG EAL +F M S I+PD +T++GVL AC H G+VE G +F SM I P
Sbjct: 265 LAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMP 324
Query: 520 NVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQI 579
+ H GC+VDLLSRAG L +A++ I MPVK ++++W +LLGA +V+K V++ E+A +++
Sbjct: 325 EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEEL 384
Query: 580 IELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAG 639
I+LEP N + +V+L NIY R+++ ++ M + G KK G S +E + + +F +
Sbjct: 385 IKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSS 444
Query: 640 DQSHPQSKEIYAKLENM 656
+ HP+++E+ L +
Sbjct: 445 GEKHPRTEELQRILREL 461
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 152/362 (41%), Gaps = 74/362 (20%)
Query: 100 DVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLK 159
D+ AR+ FD P + +WNTMI GY + S++ M D ++ +L+
Sbjct: 74 DLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR----DVMSWNTVLE 129
Query: 160 GFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVT 219
G+ N G ++ ++F+ V +
Sbjct: 130 GYAN-----------------------------------IGDMEACERVFDDMPERNVFS 154
Query: 220 WNVMLSGYNRVXXXXXXXXXXXXXXXXG-VSPNSVTLVLILSACSKLTDLAGGNYVYQY- 277
WN ++ GY + G V PN T+ L+LSAC+KL G +V++Y
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
T G + ++ ++N L+DM+G CG ++ A VF +K RD+ISW ++++G A G
Sbjct: 215 ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG----- 269
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
H EAL LF EM+ S + PD+ T V +L AC H+
Sbjct: 270 --------------------------HGTEALNLFHEMKNSGISPDKVTFVGVLCACKHM 303
Query: 398 GALELG-EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-DKFIWTA 455
G +E G + + I + ++D+ + G + +A + +M K D IW
Sbjct: 304 GLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWAT 363
Query: 456 MI 457
++
Sbjct: 364 LL 365
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 293 LLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSW 352
L M G + +A VF M ++V+ WTS+++G+ + AR+YFD PERD V W
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 353 TAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 412
MI GY+ M + EA +LF +M C
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQM-----------------PC------------------ 118
Query: 413 NKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTM 472
D + +++ Y G++E + F +M +++ F W +I G A NG E L
Sbjct: 119 ----RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGS 174
Query: 473 FSNMI-ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
F M+ E S+ P+D T VLSAC G + G+ K +V ++D+
Sbjct: 175 FKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMY 234
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
+ G ++ A++V + + + I W +++ H
Sbjct: 235 GKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAAH 268
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 113/250 (45%), Gaps = 4/250 (1%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAH-NIKPDSFTFPFL 157
GD++ +VFD +P +VF WN +IKGY++ + + M+ ++ P+ T +
Sbjct: 135 GDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLV 194
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDS-NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
L A +GK + + LG + ++ V+ A I ++ CG +++A ++F +
Sbjct: 195 LSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRD 254
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGG-NYVY 275
+++WN M++G G+SP+ VT V +L AC + + G Y
Sbjct: 255 LISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFN 314
Query: 276 QYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTGQI 334
T+ + P + ++D+ G + A + M + D + W +++ ++
Sbjct: 315 SMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKV 374
Query: 335 DLARKYFDQM 344
D+ +++
Sbjct: 375 DIGEVALEEL 384
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 309 bits (792), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 187/687 (27%), Positives = 346/687 (50%), Gaps = 47/687 (6%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K IHS I G+ + V ++ F + ++ A +V ++ VF+W +++ G+
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDF--YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
R K + +L M + ++P++FT+ +L + +L +GK + +K+G + +
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 188 VQKAFIHLFSLCGLVDL-AHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX 246
V A + ++ C ++ A ++F + VV+W ++ G
Sbjct: 362 VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
V PN VTL +L ACSKL + ++ YL V+ +V+ N L+D
Sbjct: 422 EVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD----------- 470
Query: 307 KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
+A++ ++D A M RD +++T+++ + +
Sbjct: 471 --------------------AYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHE 510
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
AL++ M ++ D+ ++ ++A A+LGALE G+ + Y K+ + + ++L+
Sbjct: 511 MALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLV 570
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
DMY KCG++E A+K F+E+ D W ++ GLA NG AL+ F M PD +
Sbjct: 571 DMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSV 630
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
T++ +LSAC++ + + G ++F M + I+P V HY +V +L RAG L+EA V+
Sbjct: 631 TFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVET 690
Query: 547 MPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENL 606
M +KPN++++ +LL ACR N+ L E A + + L P + ++Y+LL ++Y + E
Sbjct: 691 MHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELA 750
Query: 607 REVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSH-PQSKEIYAKLENMMQDLTNAGY 665
++ R +M E+ + K G S +E+ G ++ FV+ D + ++ IYA++E++ +++ G
Sbjct: 751 QKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG- 809
Query: 666 SPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKL 725
SP E A F HS K A+ Y I + P + +VKN +C DCH+ +
Sbjct: 810 SP----------YRGNENASF-HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSI 858
Query: 726 VSKAYNRELVVRDKTRFHHFRHGVCSC 752
+++ ++++ VRD + H F++G CSC
Sbjct: 859 LTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 224/493 (45%), Gaps = 37/493 (7%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
IH IK GL + N +++ + + AR++FD + H +VF W MI +++
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTDG--IWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 129 ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFV 188
S +S++ M+A P+ FTF +++ + YG + +K G + N V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 189 QKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGV 248
+ L+S CG A ++F+ + ++W +M+S GV
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 249 SPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKG 308
PN T V +L A S L L G ++ + + N+V++ L+D + +M+ A
Sbjct: 222 PPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 309 VFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREA 368
V ++ +DV WTS+VSGF +R +EA
Sbjct: 281 VLNSSGEQDVFLWTSVVSGF-------------------------------VRNLRAKEA 309
Query: 369 LALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDM 428
+ F EM+ ++P+ FT +IL+ C+ + +L+ G+ + + K + T +G+AL+DM
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDM 369
Query: 429 YFKCGNVE-KARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
Y KC E +A + F M + WT +I+GL +G ++ + M++ + P+ +T
Sbjct: 370 YMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVT 429
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
GVL AC+ V + + A + +H + + +VD + + + A +VI +M
Sbjct: 430 LSGVLRACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Query: 548 PVKPNSIVWGSLL 560
+ N I + SL+
Sbjct: 489 KRRDN-ITYTSLV 500
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 189/440 (42%), Gaps = 45/440 (10%)
Query: 178 VKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXX 237
+K GL NL + + L+ + A K+F+ V W VM+S + +
Sbjct: 50 IKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASAL 109
Query: 238 XXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMF 297
G PN T ++ +C+ L D++ G V+ + + E N V+ + L D++
Sbjct: 110 SLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLY 169
Query: 298 GACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMID 357
CG+ A +F +++ D +SWT MI
Sbjct: 170 SKCGQFKEACELFSSLQNADT-------------------------------ISWTMMIS 198
Query: 358 GYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINN 417
+ +REAL + EM + V P+EFT V +L A + LG LE G+ + + I I
Sbjct: 199 SLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPL 257
Query: 418 DTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI 477
+ + ++L+D Y + +E A + ++D F+WT+++ G N +EA+ F M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 478 ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL 537
+ P++ TY +LS C+ ++ G++ S TI+ G + + +VD+ +
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIH-SQTIKVGFEDSTDVGNALVDMYMKCSAS 376
Query: 538 KEALDVILNMPVKPNSIVWGSLLGACRVHKNVE-----LAEMAAKQIIELEPENGSVYVL 592
+ + V PN + W +L+ H V+ L EM + E+EP V
Sbjct: 377 EVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR---EVEPN----VVT 429
Query: 593 LCNIYAACKRWENLREVRTI 612
L + AC + ++R V I
Sbjct: 430 LSGVLRACSKLRHVRRVLEI 449
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 162/311 (52%), Gaps = 8/311 (2%)
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKP 382
+++S + T I ARK FD+M R +WT MI + + F AL+LF EM S P
Sbjct: 63 NLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHP 122
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
+EFT S++ +CA L + G V + K ++ +GS+L D+Y KCG ++A + F
Sbjct: 123 NEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELF 182
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVE 502
+ D WT MI L EAL +S M+++ + P++ T++ +L A + G+ E
Sbjct: 183 SSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-E 241
Query: 503 KGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL-G 561
G+ +++ ++ GI NV +VD S+ +++A+ V LN + + +W S++ G
Sbjct: 242 FGKTIHSNIIVR-GIPLNVVLKTSLVDFYSQFSKMEDAVRV-LNSSGEQDVFLWTSVVSG 299
Query: 562 ACRVHKNVE-LAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKK 620
R + E + + + L+P N + Y + ++ +A + + +++ + ++ G +
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFT-YSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 621 TP--GCSLMEM 629
+ G +L++M
Sbjct: 359 STDVGNALVDM 369
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 308 bits (789), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 203/660 (30%), Positives = 333/660 (50%), Gaps = 75/660 (11%)
Query: 35 AITAKCYSSHCDPHC--FGETP------ISLLERCKSTYQL---KQIHSKTIKMGLSSDP 83
++ A+C+S+ H GE+ +S L C S+ + +QIH + +K GL S+
Sbjct: 17 SLQARCFSAPSRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNG 76
Query: 84 VFGNKVI---AFC---CTQESGDVDYAR-----------------------QVFDTIPHP 114
N V+ A C ES D+A+ ++FD +P
Sbjct: 77 YICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPER 136
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLL 174
S + T+IKGY++ + + ++ M I + T ++ ++ + ++L
Sbjct: 137 SCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQ 196
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN------ 228
A+KL L+ +FV +H++ LC + A K+F+ +VTWNVML+GY+
Sbjct: 197 SLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIE 256
Query: 229 -------------------------RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
R G+ P+ V +V +LSA +
Sbjct: 257 QAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASA 316
Query: 264 KLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTS 323
+ + G ++ + + + ++ ++ + ++ A F+ + S +
Sbjct: 317 RSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNA 376
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM-QMSHVKP 382
+++GF G ++ AR+ FDQ ++D SW AMI GY + + AL LFREM S VKP
Sbjct: 377 LIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKP 436
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
D TMVS+ +A + LG+LE G+ Y++ + I + + +A+IDMY KCG++E A F
Sbjct: 437 DAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIF 496
Query: 443 ---KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAG 499
K + W A+I G A +GH + AL ++S++ I P+ IT++GVLSAC HAG
Sbjct: 497 HQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAG 556
Query: 500 MVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSL 559
+VE G+ +F SM HGI+P++ HYGCMVDLL +AG L+EA ++I MPVK + ++WG L
Sbjct: 557 LVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGML 616
Query: 560 LGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIK 619
L A R H NVE+AE+AA ++ ++P +G V+L N+YA RWE++ VR M R ++
Sbjct: 617 LSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/437 (33%), Positives = 256/437 (58%), Gaps = 4/437 (0%)
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
++ ++ G I+ AR F+ MPE+ V+W +I GY + EAL L +M+ S V D
Sbjct: 265 LIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSID 324
Query: 384 EFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK 443
+FT+ ++ L LEL + + +N ++ +AL+D Y K G V+ AR F
Sbjct: 325 QFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFD 384
Query: 444 EMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEK 503
++ +K+ W A++ G A +G G +A+ +F MI +++ P+ +T++ VLSAC ++G+ E+
Sbjct: 385 KLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQ 444
Query: 504 GRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGAC 563
G + F SM+ HGIKP HY CM++LL R G L EA+ I P+K +W +LL AC
Sbjct: 445 GWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNAC 504
Query: 564 RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPG 623
R+ +N+EL + A+++ + PE YV++ N+Y + + V + +G+ P
Sbjct: 505 RMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPA 564
Query: 624 CSLMEMNGIIYEFVAGDQ----SHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEE 679
C+ +E+ + F++GD+ + ++IY K++ +M++++ GYS + + D+ E+
Sbjct: 565 CTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEK 624
Query: 680 DKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDK 739
++E HSEKLAIAY L+++ ++I +N R+C +CH++ + +S RE+VVRD
Sbjct: 625 EEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDA 684
Query: 740 TRFHHFRHGVCSCNNFW 756
+RFHHF+ G CSC +W
Sbjct: 685 SRFHHFKEGKCSCGGYW 701
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 147/309 (47%), Gaps = 33/309 (10%)
Query: 258 ILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD 317
++ AC +L + VY ++ EP M N +L M CG +
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMI-------------- 174
Query: 318 VISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQM 377
ID AR+ FD++PER+ S+ ++I G++ ++ EA LF+ M
Sbjct: 175 ----------------ID-ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWE 217
Query: 378 SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
+ T +L A A LG++ +G+ + K + ++TF+ LIDMY KCG++E
Sbjct: 218 ELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIED 277
Query: 438 ARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTH 497
AR F+ M +K W +I G A++G+ EEAL + +M +S ++ D T ++ T
Sbjct: 278 ARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTK 337
Query: 498 AGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWG 557
+E ++ AS+ I++G + + +VD S+ G + A V +P K N I W
Sbjct: 338 LAKLELTKQAHASL-IRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRK-NIISWN 395
Query: 558 SLLGACRVH 566
+L+G H
Sbjct: 396 ALMGGYANH 404
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 33/344 (9%)
Query: 60 RCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIW 119
R KS +K+++ + G + N+++ + G + AR++FD IP +++ +
Sbjct: 135 RLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLM--HVKCGMIIDARRLFDEIPERNLYSY 192
Query: 120 NTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVK 179
++I G+ ++ +M ++ TF +L+ ++ GK L A+K
Sbjct: 193 YSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK 252
Query: 180 LGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXX 239
LG+ N FV I ++S CG ++ A F V WN +++GY
Sbjct: 253 LGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCL 312
Query: 240 XXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGA 299
GVS + TL +++ +KL L + L E +V L+D +
Sbjct: 313 LYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSK 372
Query: 300 CGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGY 359
G +D A+ VFD + +++ISW +++ G+AN G+
Sbjct: 373 WGRVDTARYVFDKLPRKNIISWNALMGGYANHGR-------------------------- 406
Query: 360 LRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG 403
+A+ LF +M ++V P+ T +++L+ACA+ G E G
Sbjct: 407 -----GTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQG 445
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 159/382 (41%), Gaps = 23/382 (6%)
Query: 43 SHCDPHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVD 102
S C+ H F + S Y KQ+H +K+G+ + +I + GD++
Sbjct: 220 SDCETHTFA-VMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDM--YSKCGDIE 276
Query: 103 YARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFT 162
AR F+ +P + WN +I GY+ + + + M + D FT +++ T
Sbjct: 277 DARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRIST 336
Query: 163 NDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNV 222
L+ K ++ G +S + A + +S G VD A +F+ +++WN
Sbjct: 337 KLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNA 396
Query: 223 MLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE-- 280
++ GY V+PN VT + +LSAC+ G ++ ++E
Sbjct: 397 LMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVH 456
Query: 281 GIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVIS-WTSIVSGFANTGQIDLAR- 338
GI +P + ++++ G G +D A + ++ W ++++ ++L R
Sbjct: 457 GI-KPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRV 515
Query: 339 ---KYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
K + PE+ ++ M + Y M EA + + E +S++ AC
Sbjct: 516 VAEKLYGMGPEK-LGNYVVMYNMYNSMGKTAEAAGVLETL--------ESKGLSMMPACT 566
Query: 396 HLGALELGEWVKTYIDKNKINN 417
+E+G+ +++ ++ ++
Sbjct: 567 W---VEVGDQTHSFLSGDRFDS 585
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 342 DQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMS-HVKPDEFTMVSILTACAHLGAL 400
D + V+ + I+ + N FREA LF +++ K T +++ AC L ++
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSI 139
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGL 460
+ V ++ N + ++ + ++ M+ KCG + AR+ F E+ +++ + + ++I G
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 461 AINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN 520
G+ EA +F M E + T+ +L A G + G++ ++ G+ N
Sbjct: 200 VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVC-ALKLGVVDN 258
Query: 521 VTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA 572
++D+ S+ G +++A MP K ++ W +++ +H E A
Sbjct: 259 TFVSCGLIDMYSKCGDIEDARCAFECMPEK-TTVAWNNVIAGYALHGYSEEA 309
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 306 bits (784), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 183/635 (28%), Positives = 324/635 (51%), Gaps = 44/635 (6%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+ +H +K GL D VF +A + G +D A +VFD IP + WN ++ GY
Sbjct: 193 RGVHGYVVKSGLE-DCVFVASSLADMYGK-CGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ + I ++ M ++P T L N ++ GK A+ G++ +
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+ + ++ + GL++ A +F+ +VVTWN+++SGY +
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
+ + VTL ++SA ++ +L G V Y E ++V+ + ++DM+ CG + AK
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 308 GVFDNMKTRDVISWTSIVSGFANTG----------------------------------- 332
VFD+ +D+I W ++++ +A +G
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 333 QIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMV 388
Q+D A+ F QM + +SWT M++G ++ EA+ R+MQ S ++P+ F++
Sbjct: 491 QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
Query: 389 SILTACAHLGALELGEWVKTYIDKNKINNDTF-IGSALIDMYFKCGNVEKARKTFKEMHQ 447
L+ACAHL +L +G + YI +N ++ I ++L+DMY KCG++ KA K F
Sbjct: 551 VALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLY 610
Query: 448 KDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKF 507
+ + AMI A+ G+ +EA+ ++ ++ + PD+IT VLSAC HAG + + +
Sbjct: 611 SELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEI 670
Query: 508 FASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHK 567
F + + +KP + HYG MVDLL+ AG ++AL +I MP KP++ + SL+ +C +
Sbjct: 671 FTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQR 730
Query: 568 NVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLM 627
EL + +++++E EPEN YV + N YA W+ + ++R +M +G+KK PGCS +
Sbjct: 731 KTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 790
Query: 628 EMNGI--IYEFVAGDQSHPQSKEIYAKLENMMQDL 660
++ G ++ FVA D++H + EI L ++ D+
Sbjct: 791 QITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 134/564 (23%), Positives = 255/564 (45%), Gaps = 48/564 (8%)
Query: 47 PHCFGETPISLLERCKSTYQL---KQIHSKTIKMG--LSSDPVFGNKVIAFCCTQESGDV 101
P +GE +L+ C L KQIH++ +K G + + K++ F ++ +
Sbjct: 70 PEIYGE----ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDA--L 123
Query: 102 DYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGF 161
+ A +F + +VF W +I RI + + ++ ML + I PD+F P + K
Sbjct: 124 EIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKAC 183
Query: 162 TNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWN 221
++G+ + + VK GL+ +FV + ++ CG++D A K+F+ V WN
Sbjct: 184 GALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWN 243
Query: 222 VMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEG 281
++ GY + GV P VT+ LSA + + + G +
Sbjct: 244 ALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN 303
Query: 282 IVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYF 341
+E + ++ LL+ + G ++ A+ VFD M +DV++W I+SG+ G ++
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVE------ 357
Query: 342 DQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALE 401
+A+ + + M++ +K D T+ ++++A A L+
Sbjct: 358 -------------------------DAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK 392
Query: 402 LGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLA 461
LG+ V+ Y ++ +D + S ++DMY KCG++ A+K F +KD +W ++ A
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYA 452
Query: 462 INGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNV 521
+G EAL +F M + P+ IT+ ++ + G V++ + F M GI PN+
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ-SSGIIPNL 511
Query: 522 THYGCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLLGACRVHKNVELAEMAAKQ 578
+ M++ + + G +EA+ + M ++PN+ L AC ++ +
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY 571
Query: 579 IIELEPENG--SVYVLLCNIYAAC 600
II + S+ L ++YA C
Sbjct: 572 IIRNLQHSSLVSIETSLVDMYAKC 595
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 188/432 (43%), Gaps = 35/432 (8%)
Query: 133 KSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLG--LDSNLFVQK 190
K +S+ M N++ + +L+G + L GK + +K G N +++
Sbjct: 52 KEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIET 111
Query: 191 AFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSP 250
+ ++ C +++A +F+ V +W ++ R+ + P
Sbjct: 112 KLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFP 171
Query: 251 NSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVF 310
++ + + AC L G V+ Y+ + +E + + + L DM+G CG +D A VF
Sbjct: 172 DNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVF 231
Query: 311 DNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALA 370
D + R+ ++W +++ G+ G+ + EA+
Sbjct: 232 DEIPDRNAVAWNALMVGYVQNGKNE-------------------------------EAIR 260
Query: 371 LFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYF 430
LF +M+ V+P T+ + L+A A++G +E G+ N + D +G++L++ Y
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320
Query: 431 KCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIG 490
K G +E A F M +KD W +I G G E+A+ M M + D +T
Sbjct: 321 KVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380
Query: 491 VLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK 550
++SA ++ G++ I+H + ++ ++D+ ++ G + +A V + V+
Sbjct: 381 LMSAAARTENLKLGKE-VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKV-FDSTVE 438
Query: 551 PNSIVWGSLLGA 562
+ I+W +LL A
Sbjct: 439 KDLILWNTLLAA 450
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 142/286 (49%), Gaps = 4/286 (1%)
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVK 381
T +V +A +++A F ++ R+ SW A+I R+ AL F EM + +
Sbjct: 111 TKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF 170
Query: 382 PDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKT 441
PD F + ++ AC L G V Y+ K+ + + F+ S+L DMY KCG ++ A K
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 442 FKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMV 501
F E+ ++ W A++VG NG EEA+ +FS+M + + P +T LSA + G V
Sbjct: 231 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGV 290
Query: 502 EKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLG 561
E+G++ A + I +G++ + +++ + G L E +++ + + + + W ++
Sbjct: 291 EEGKQSHA-IAIVNGMELDNILGTSLLNFYCKVG-LIEYAEMVFDRMFEKDVVTWNLIIS 348
Query: 562 ACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLR 607
VE A + Q++ LE V L + +A R ENL+
Sbjct: 349 GYVQQGLVEDA-IYMCQLMRLEKLKYDC-VTLATLMSAAARTENLK 392
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 5/237 (2%)
Query: 337 ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAH 396
++ + +Q S+ + + +EAL+L EM +++ IL C +
Sbjct: 23 SKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVY 82
Query: 397 LGALELGEWVKTYIDKNK--INNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWT 454
L G+ + I KN + +I + L+ Y KC +E A F ++ ++ F W
Sbjct: 83 ERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWA 142
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
A+I G E AL F M+E+ I PD+ V AC GR ++
Sbjct: 143 AIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHG-YVVK 201
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL-GACRVHKNVE 570
G++ V + D+ + G L +A V +P + N++ W +L+ G + KN E
Sbjct: 202 SGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR-NAVAWNALMVGYVQNGKNEE 257
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/617 (29%), Positives = 310/617 (50%), Gaps = 34/617 (5%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVI----AFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIK 124
Q+H+ I G+ V K++ AF E+ + + +P WN +I
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLP------WNVLIA 117
Query: 125 GYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDS 184
Y++ + I+ Y M++ I+PD+FT+P +LK + + +G+V+ S
Sbjct: 118 SYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKS 177
Query: 185 NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXX 244
+L+V A I ++ + +A ++F+ + V+WN +++ Y
Sbjct: 178 SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMW 237
Query: 245 XXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE-----PNLVMENVLLDMFGA 299
GV + +T +I C L GNYV G++ P + ++ A
Sbjct: 238 FSGVEVSVITWNIISGGC-----LQTGNYVGAL---GLISRMRNFPTSLDPVAMIIGLKA 289
Query: 300 CGEMDAAK--------GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
C + A + + + D + ++++ ++ + A F Q E +
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVR-NTLITMYSKCKDLRHALIVFRQTEENSLCT 348
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
W ++I GY ++N EA L REM ++ +P+ T+ SIL CA + L+ G+ YI
Sbjct: 349 WNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 412 KNKINND-TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEAL 470
+ K D T + ++L+D+Y K G + A++ M ++D+ +T++I G G G AL
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVAL 468
Query: 471 TMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDL 530
+F M S I PD +T + VLSAC+H+ +V +G + F M ++GI+P + H+ CMVDL
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDL 528
Query: 531 LSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVY 590
RAG L +A D+I NMP KP+ W +LL AC +H N ++ + AA++++E++PEN Y
Sbjct: 529 YGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYY 588
Query: 591 VLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIY 650
VL+ N+YAA W L EVRTIM + G+KK PGC+ ++ + F GD S P++ Y
Sbjct: 589 VLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTY 648
Query: 651 AKLENMMQDLT-NAGYS 666
L+ + Q + NAGY+
Sbjct: 649 PLLDGLNQLMKDNAGYA 665
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 180/408 (44%), Gaps = 5/408 (1%)
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
LL + A G + H + G++ + + + +S L + A I D
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
+ WNV+++ Y + G+ P++ T +L AC + D+A G V+
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDL 336
+ + +L + N L+ M+ M A+ +FD M RD +SW ++++ +A+ G
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 337 ARKYFDQM----PERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILT 392
A + FD+M E ++W + G L+ ++ AL L M+ D M+ L
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 393 ACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFI 452
AC+ +GA+ LG+ + + + + + LI MY KC ++ A F++ +
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCT 348
Query: 453 WTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMT 512
W ++I G A EEA + M+ + P+ IT +L C ++ G++F +
Sbjct: 349 WNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 513 IQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
+ K + +VD+ +++G + A V ++ K + + + SL+
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVS-DLMSKRDEVTYTSLI 455
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 58/323 (17%)
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
W +I Y + F E +A ++ M ++PD FT S+L AC + G V I+
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
+ + ++ +ALI MY + N+ AR+ F M ++D W A+I A G EA
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
+F M S + IT+ + C G +Y + L+
Sbjct: 232 LFDKMWFSGVEVSVITWNIISGGCLQTG-----------------------NYVGALGLI 268
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWG----SLLGACRVHKNVE-LAEMAAKQIIELEPEN 586
SR + +LD P +++ G SL+GA R+ K + LA ++ I+
Sbjct: 269 SRMRNFPTSLD--------PVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGID----- 315
Query: 587 GSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQS 646
+V L +Y+ CK +LR + ++T SL N II + ++S S
Sbjct: 316 -NVRNTLITMYSKCK---DLRHALIVF-----RQTEENSLCTWNSIISGYAQLNKSEEAS 366
Query: 647 KEIYAKLENMMQDLTNAGYSPDT 669
++++++ AG+ P++
Sbjct: 367 --------HLLREMLVAGFQPNS 381
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/602 (27%), Positives = 311/602 (51%), Gaps = 18/602 (2%)
Query: 56 SLLERCKSTYQLK---QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
S+L C + +L+ Q+H+ +K ++D + + + ++ A+ +FD
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM--YAKCDNMQDAQILFDNSE 343
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
+ + +N MI GYS+ + ++ +++ + D + + + L G
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQ 403
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
+ A+K L ++ V A I ++ C + A ++F+ + V+WN +++ + +
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENV 292
+ P+ T IL AC+ L G ++ + + + N +
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 293 LLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSW 352
L+DM+ CG ++ A+ + R +S G ++ K ++ + VSW
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEMCVSW 571
Query: 353 TAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 412
++I GY+ +A LF M + PD+FT ++L CA+L + LG+ + + K
Sbjct: 572 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 631
Query: 413 NKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTM 472
++ +D +I S L+DMY KCG++ +R F++ ++D W AMI G A +G GEEA+ +
Sbjct: 632 KELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQL 691
Query: 473 FSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLS 532
F MI +I P+ +T+I +L AC H G+++KG ++F M +G+ P + HY MVD+L
Sbjct: 692 FERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILG 751
Query: 533 RAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHK-NVELAEMAAKQIIELEPENGSVYV 591
++G +K AL++I MP + + ++W +LLG C +H+ NVE+AE A ++ L+P++ S Y
Sbjct: 752 KSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYT 811
Query: 592 LLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYA 651
LL N+YA WE + ++R M +KK PGCS +E+ ++ F+ GD++HP+ +EIY
Sbjct: 812 LLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYE 871
Query: 652 KL 653
+L
Sbjct: 872 EL 873
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 235/525 (44%), Gaps = 64/525 (12%)
Query: 82 DPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLL 141
D V NK+I +S D+ A F+ +P V WN+M+ GY + I +++
Sbjct: 113 DVVSWNKMIN--GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 142 MLAHNIKPDSFTFPFLLK--GFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLC 199
M I+ D TF +LK F D +L G + V++G D+++ A + +++
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSL--GMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 200 GLVDLAHKIFNMGDAWEVVTWNVMLSG--YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVL 257
+ ++F V+W+ +++G N + GVS +
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS--IYAS 286
Query: 258 ILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD 317
+L +C+ L++L G ++ + + + ++ LDM+ C M A+ +FDN +
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE--- 343
Query: 318 VISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQM 377
+L R+ S+ AMI GY + H +AL LF +
Sbjct: 344 -----------------NLNRQ-----------SYNAMITGYSQEEHGFKALLLFHRLMS 375
Query: 378 SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
S + DE ++ + ACA + L G + K+ ++ D + +A IDMY KC + +
Sbjct: 376 SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAE 435
Query: 438 ARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTH 497
A + F EM ++D W A+I NG G E L +F +M+ S I PD+ T+ +L ACT
Sbjct: 436 AFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT- 494
Query: 498 AGMVEKGRKFFASMTIQHGIKPNVTHYGC-MVDLLSRAGHLKEA---------------- 540
G + G + +S+ ++ G+ N + GC ++D+ S+ G ++EA
Sbjct: 495 GGSLGYGMEIHSSI-VKSGMASN-SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGT 552
Query: 541 ---LDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIEL 582
L+ + N ++ + W S++ + + E A+M +++E+
Sbjct: 553 MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 152/664 (22%), Positives = 262/664 (39%), Gaps = 111/664 (16%)
Query: 142 MLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGL 201
M+ +P +F LL+ +TN ++ D K+ L ++ I+ +S
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD---KMPL-RDVVSWNKMINGYSKSND 129
Query: 202 VDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSA 261
+ A+ FNM +VV+WN MLSGY + G+ + T +IL
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 262 CSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISW 321
CS L D + G ++ + + ++V + LLDM+ AKG R V S
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY--------AKG------KRFVESL 235
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVK 381
+ F +PE++ VSW+A+I G ++ N AL F+EMQ +
Sbjct: 236 -----------------RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 278
Query: 382 PDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKT 441
+ S+L +CA L L LG + + K+ D + +A +DMY KC N++ A+
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 442 FKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMV 501
F ++ + AMI G + HG +AL +F ++ S + D+I+ GV AC +
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Query: 502 EKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV------------------ 543
+G + + + I+ + +V +D+ + L EA V
Sbjct: 399 SEGLQIYG-LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 544 ----------------ILNMPVKPNSIVWGSLLGAC---------RVHKNVELAEMAAKQ 578
+L ++P+ +GS+L AC +H ++ + MA+
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMAS-- 515
Query: 579 IIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERG--------IKKTPGCSLMEM- 629
N SV L ++Y+ C E ++ + +R ++K L EM
Sbjct: 516 -------NSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMC 568
Query: 630 ---NGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPD--TSEVFLDIGEEDKETA 684
N II +V +QS ++ ++ ++ M G +PD T LD
Sbjct: 569 VSWNSIISGYVMKEQSE-DAQMLFTRMMEM-------GITPDKFTYATVLDTCANLASAG 620
Query: 685 LFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHH 744
L + I L S + +V C D H + K+ R+ V + +
Sbjct: 621 LGKQIHAQVIKKEL-QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGY 679
Query: 745 FRHG 748
HG
Sbjct: 680 AHHG 683
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 9/296 (3%)
Query: 249 SPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKG 308
S ++ + C+K L G + ++ P + N LL ++ + +A
Sbjct: 45 SVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASM 104
Query: 309 VFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREA 368
VFD M RDV+SW +++G++ + + A +F+ MP RD VSW +M+ GYL+ ++
Sbjct: 105 VFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 164
Query: 369 LALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDM 428
+ +F +M ++ D T IL C+ L LG + + + + D SAL+DM
Sbjct: 165 IEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDM 224
Query: 429 YFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITY 488
Y K ++ + F+ + +K+ W+A+I G N AL F M + + Y
Sbjct: 225 YAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY 284
Query: 489 IGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCM----VDLLSRAGHLKEA 540
VL +C + G + A H +K + G + +D+ ++ ++++A
Sbjct: 285 ASVLRSCAALSELRLGGQLHA-----HALKSDFAADGIVRTATLDMYAKCDNMQDA 335
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 180/607 (29%), Positives = 320/607 (52%), Gaps = 22/607 (3%)
Query: 68 KQIHSKTIKMGLSSDPVF-GNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
+QIHS ++ VF N +++F G ++ A +F + + WN +I GY
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSF--YLRVGRIEEAASLFTRMGSKDLVSWNVVIAGY 304
Query: 127 -SRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLG-LDS 184
S K+ + L+ ++ PDS T +L L GK + + ++ L
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 185 NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXX 244
+ V A I ++ G A+ F++ ++++WN +L +
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLL 424
Query: 245 XXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY-LTEGIV----EPNLVMENVLLDMFGA 299
++ +SVT++ +L C + + V+ Y + G++ EP L N LLD +
Sbjct: 425 NEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKL--GNALLDAYAK 482
Query: 300 CGEMDAAKGVFDNM-KTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
CG ++ A +F + + R ++S+ S++SG+ N+G D A+ F +M D +W+ M+
Sbjct: 483 CGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRI 542
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
Y EA+ +FRE+Q ++P+ T++++L CA L +L L YI + + +
Sbjct: 543 YAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDI 602
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
G+ L+D+Y KCG+++ A F+ ++D ++TAM+ G A++G G+EAL ++S+M E
Sbjct: 603 RLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTE 661
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
S+I PD + +L+AC HAG+++ G + + S+ HG+KP + Y C VDL++R G L
Sbjct: 662 SNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLD 721
Query: 539 EALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYA 598
+A + MPV+PN+ +WG+LL AC + ++L A +++ E ++ +VL+ N+YA
Sbjct: 722 DAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYA 781
Query: 599 ACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQ 658
A +WE + E+R +M ++ +KK GCS +E++G FV+GD SHP+ I+
Sbjct: 782 ADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIF-------- 833
Query: 659 DLTNAGY 665
DL NA Y
Sbjct: 834 DLVNALY 840
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 141/610 (23%), Positives = 256/610 (41%), Gaps = 78/610 (12%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
+ L R +Y K +HS IK GL D + GN +++ D A FD I
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD-AYTAFDGIADK 187
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL---KGFTNDMALKYGK 171
V WN +I G+S + + LML +P+ T +L ++A + G+
Sbjct: 188 DVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGR 247
Query: 172 VLLDHAVKLG-LDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRV 230
+ + V+ L +++FV + + + G ++ A +F + ++V+WNV+++GY
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 231 XXXXXXXXXXXXXXXXG-VSPNSVTLVLILSACSKLTDLAGGNYVYQY-LTEGIVEPNLV 288
G VSP+SVT++ IL C++LTDLA G ++ Y L + +
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS 367
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
+ N L+ + G+ AA F M T+D+ISW +I+ FA++ P++
Sbjct: 368 VGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADS-------------PKQF 414
Query: 349 YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKT 408
+ EA+ L D T++S+L C ++ + + V
Sbjct: 415 QFLNLL-------HHLLNEAITL-----------DSVTILSLLKFCINVQGIGKVKEVHG 456
Query: 409 YIDKNKINNDT---FIGSALIDMYFKCGNVEKARKT------------------------ 441
Y K + +D +G+AL+D Y KCGNVE A K
Sbjct: 457 YSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSG 516
Query: 442 --------FKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLS 493
F EM D W+ M+ A + EA+ +F + + P+ +T + +L
Sbjct: 517 SHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLP 576
Query: 494 ACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNS 553
C + R+ + I+ G+ ++ G ++D+ ++ G LK A V + +
Sbjct: 577 VCAQLASLHLVRQCHGYI-IRGGLG-DIRLKGTLLDVYAKCGSLKHAYSV-FQSDARRDL 633
Query: 554 IVWGSLLGACRVHKNVELAEMAAKQIIE--LEPENGSVYVLLCNIYAACKRWENLREVRT 611
+++ +++ VH + A M + E ++P++ + +L A + L+ +
Sbjct: 634 VMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDS 693
Query: 612 IMMERGIKKT 621
I G+K T
Sbjct: 694 IRTVHGMKPT 703
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 178/420 (42%), Gaps = 40/420 (9%)
Query: 150 DSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF 209
D F ++K + L G+ L KLG + V K+ +++++ C +D K+F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 210 NMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLA 269
D+ + V WN++L+G + P+SVT ++L C +L D
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSY 139
Query: 270 GGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEM-DAAKGVFDNMKTRDVISWTSIVSGF 328
G ++ Y+ + +E + ++ N L+ M+ G + A FD + +DV+SW +I++GF
Sbjct: 140 NGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGF 199
Query: 329 ANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMV 388
+ N +A F M +P+ T+
Sbjct: 200 SEN-------------------------------NMMADAFRSFCLMLKEPTEPNYATIA 228
Query: 389 SILTACAHLG---ALELGEWVKTY-IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE 444
++L CA + A G + +Y + ++ + F+ ++L+ Y + G +E+A F
Sbjct: 229 NVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTR 288
Query: 445 MHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI-ESSITPDDITYIGVLSACTHAGMVEK 503
M KD W +I G A N +A +F N++ + ++PD +T I +L C +
Sbjct: 289 MGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLAS 348
Query: 504 GRKFFASMTIQHGIKPNVTHYG-CMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
G++ S ++H T G ++ +R G A M K + I W ++L A
Sbjct: 349 GKEIH-SYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 110/267 (41%), Gaps = 13/267 (4%)
Query: 362 MNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFI 421
M R+ + FR +S D + ++ ACA + L G + + K + +
Sbjct: 1 MGPLRQFVQNFR--LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEV 58
Query: 422 GSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM-IESS 480
++++MY KC ++ +K F++M D +W ++ GL+++ G E + F M
Sbjct: 59 SKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADE 117
Query: 481 ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA 540
P +T+ VL C G G+ S I+ G++ + +V + ++ G +
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMH-SYIIKAGLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 541 LDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAAC 600
+ + + W +++ +N +A+ + L+ Y + N+ C
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAG--FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
Query: 601 KRWE------NLREVRTIMMERGIKKT 621
+ + R++ + +++R +T
Sbjct: 235 ASMDKNIACRSGRQIHSYVVQRSWLQT 261
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 302 bits (773), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 188/643 (29%), Positives = 303/643 (47%), Gaps = 74/643 (11%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSV 116
LL +C + L+Q H GL D K+++ G AR VFD IP P
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSL--YGFFGYTKDARLVFDQIPEPDF 107
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDH 176
++W M++ Y + +Y L++ H + D F LK T L GK +
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 177 AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXX 236
VK+ N+ V + +++ CG + AHK+FN VV W M++GY +
Sbjct: 168 LVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 237 XXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDM 296
V N T ++ AC+KL+ L G + + L + +E + + LLDM
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 297 FGACGEM-------------------------------DAAKGVFDNMKTRDV----ISW 321
+ CG++ + A +F MK ++ ++
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 322 TSIVSGFANTGQIDLAR---------------------------------KY-FDQMPER 347
S++SG ++L R KY F+ E+
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
D V+W ++I G+ + EAL LF M V P+ T+ S+ +ACA LG+L +G +
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 408 TYIDKNKI--NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGH 465
Y K ++ +G+AL+D Y KCG+ + AR F + +K+ W+AMI G G
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGD 526
Query: 466 GEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYG 525
+L +F M++ P++ T+ +LSAC H GMV +G+K+F+SM + P+ HY
Sbjct: 527 TIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYT 586
Query: 526 CMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPE 585
CMVD+L+RAG L++ALD+I MP++P+ +G+ L C +H +L E+ K++++L P+
Sbjct: 587 CMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPD 646
Query: 586 NGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLME 628
+ S YVL+ N+YA+ RW +EVR +M +RG+ K G S ME
Sbjct: 647 DASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 175/564 (31%), Positives = 284/564 (50%), Gaps = 37/564 (6%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRI 129
+H + ++ D N ++A G V+ AR VFD + + V WNTMI GY R
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAM--YMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 130 SCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQ 189
+ M+ M+ ++ D T +L + L+ G+ + + L + V+
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 190 KAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVS 249
A ++++ CG +D A +F+ + +V+TW M++GY GV
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
PN+VT+ ++S C + G ++ + V ++++E
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE------------------- 357
Query: 310 FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREAL 369
TS++S +A ++DL + F + W+A+I G ++ +AL
Sbjct: 358 ------------TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDAL 405
Query: 370 ALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMY 429
LF+ M+ V+P+ T+ S+L A A L L + Y+ K + + L+ +Y
Sbjct: 406 GLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 465
Query: 430 FKCGNVEKARKTF---KEMHQ-KDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
KCG +E A K F +E H+ KD +W A+I G ++G G AL +F M+ S +TP++
Sbjct: 466 SKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNE 525
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
IT+ L+AC+H+G+VE+G F M + HY C+VDLL RAG L EA ++I
Sbjct: 526 ITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLIT 585
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
+P +P S VWG+LL AC H+NV+L EMAA ++ ELEPEN YVLL NIYAA RW++
Sbjct: 586 TIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKD 645
Query: 606 LREVRTIMMERGIKKTPGCSLMEM 629
+ +VR++M G++K PG S +E+
Sbjct: 646 MEKVRSMMENVGLRKKPGHSTIEI 669
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 232/510 (45%), Gaps = 40/510 (7%)
Query: 62 KSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNT 121
+S + K +H I G S + + + G + YAR++F+ +P S+ +N
Sbjct: 29 QSISKTKALHCHVITGGRVSGHILSTLSVTYALC---GHITYARKLFEEMPQSSLLSYNI 85
Query: 122 MIKGYSRISCPKSGISMYLLMLAHNIK--PDSFTFPFLLKGFTNDMALKYGKVLLDHAVK 179
+I+ Y R IS+++ M++ +K PD +T+PF+ K ++K G V+ ++
Sbjct: 86 VIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILR 145
Query: 180 LGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXX 239
+ +VQ A + ++ G V++A +F++ +V++WN M+SGY R
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMM 205
Query: 240 XXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGA 299
V + T+V +L C L DL G V++ + E + + ++N L++M+
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLK 265
Query: 300 CGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGY 359
CG MD A+ VFD M+ RDVI+WT +++G+ G ++
Sbjct: 266 CGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE------------------------ 301
Query: 360 LRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDT 419
AL L R MQ V+P+ T+ S+++ C + G+ + + + ++ +D
Sbjct: 302 -------NALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDI 354
Query: 420 FIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIES 479
I ++LI MY KC V+ + F + W+A+I G N +AL +F M
Sbjct: 355 IIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE 414
Query: 480 SITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKE 539
+ P+ T +L A + + +T + G ++ +V + S+ G L+
Sbjct: 415 DVEPNIATLNSLLPAYAALADLRQAMNIHCYLT-KTGFMSSLDAATGLVHVYSKCGTLES 473
Query: 540 ALDVILNMPVKPNS---IVWGSLLGACRVH 566
A + + K S ++WG+L+ +H
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 160/368 (43%), Gaps = 34/368 (9%)
Query: 140 LLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLC 199
+L A+N + LL F ++ K L H + G S + + ++LC
Sbjct: 4 VLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSV-TYALC 62
Query: 200 GLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVS--PNSVTLVL 257
G + A K+F ++++N+++ Y R GV P+ T
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 258 ILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD 317
+ A +L + G V+ + + ++N LL M+ G+++ A+ VFD MK RD
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 318 VISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQM 377
VISW +++SG Y R + +AL +F M
Sbjct: 183 VISWNTMISG-------------------------------YYRNGYMNDALMMFDWMVN 211
Query: 378 SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
V D T+VS+L C HL LE+G V +++ ++ + + +AL++MY KCG +++
Sbjct: 212 ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 438 ARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTH 497
AR F M ++D WT MI G +G E AL + M + P+ +T ++S C
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 498 AGMVEKGR 505
A V G+
Sbjct: 332 ALKVNDGK 339
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 158/352 (44%), Gaps = 45/352 (12%)
Query: 293 LLDMFGACGEMDAAKGVFDNMKTRDVIS---WTSIVSGFANTGQIDLARKYFDQMPERDY 349
LL+ F A + K + ++ T +S +++ +A G I ARK F++MP+
Sbjct: 21 LLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSL 80
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQMSHVK--PDEFTMVSILTACAHLGALELGEWVK 407
+S+ +I Y+R + +A+++F M VK PD +T + A L +++LG V
Sbjct: 81 LSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVH 140
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGE 467
I ++ D ++ +AL+ MY G VE AR F M +D W MI G NG+
Sbjct: 141 GRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMN 200
Query: 468 EALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKF------------------FA 509
+AL MF M+ S+ D T + +L C H +E GR
Sbjct: 201 DALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALV 260
Query: 510 SMTIQHGI------------KPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPNSI 554
+M ++ G + +V + CM++ + G ++ AL++ M V+PN++
Sbjct: 261 NMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAV 320
Query: 555 VWGSLLGAC----RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKR 602
SL+ C +V+ L A +Q + + + L ++YA CKR
Sbjct: 321 TIASLVSVCGDALKVNDGKCLHGWAVRQQVY---SDIIIETSLISMYAKCKR 369
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 299/596 (50%), Gaps = 44/596 (7%)
Query: 100 DVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLK 159
D+ A ++F IP + + TMI G+ R + + +L DS LL
Sbjct: 128 DLGKAYELFCDIPEKNAVSYATMITGFVRAG--RFDEAEFLYAETPVKFRDSVASNVLLS 185
Query: 160 GFTNDMALKYGKVLLDHAVKL--GLDSNLFVQ-KAFIHLFSLCGLVDLAHKIFNMGDAWE 216
G+ L+ GK + AV++ G+ V + +H + G + A +F+
Sbjct: 186 GY-----LRAGK--WNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERN 238
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG-VSPNSVTLVLILSACSKLTDLAGGNYVY 275
V+TW M+ GY + G V NS TL ++ AC G+ ++
Sbjct: 239 VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIH 298
Query: 276 QYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD------------------ 317
++ +E +L + N L+ M+ G M AK VF MK +D
Sbjct: 299 GLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQIS 358
Query: 318 -------------VISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
++SWT ++ GF+ G+I + F MPE+D ++WTAMI ++ +
Sbjct: 359 EAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGY 418
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSA 424
+ EAL F +M V P+ +T S+L+A A L L G + + K I ND + ++
Sbjct: 419 YEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNS 478
Query: 425 LIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPD 484
L+ MY KCGN A K F + + + + MI G + NG G++AL +FS + S P+
Sbjct: 479 LVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
+T++ +LSAC H G V+ G K+F SM + I+P HY CMVDLL R+G L +A ++I
Sbjct: 539 GVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLI 598
Query: 545 LNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWE 604
MP KP+S VWGSLL A + H V+LAE+AAK++IELEP++ + YV+L +Y+ +
Sbjct: 599 STMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNR 658
Query: 605 NLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDL 660
+ + I + IKK PG S + + G ++ F+AGD+S +EI L+ + +++
Sbjct: 659 DCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEM 714
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 4/242 (1%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
G++ ++F +P W MI + + + + ML + P+S+TF +L
Sbjct: 386 GEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVL 445
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV 218
+ L G + VK+ + ++L VQ + + ++ CG + A+KIF+ +V
Sbjct: 446 SATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIV 505
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKL--TDLAGGNYVYQ 276
++N M+SGY+ G PN VT + +LSAC + DL G Y
Sbjct: 506 SYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDL-GWKYFKS 564
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVIS-WTSIVSGFANTGQID 335
+ +EP ++D+ G G +D A + M + W S++S ++D
Sbjct: 565 MKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVD 624
Query: 336 LA 337
LA
Sbjct: 625 LA 626
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 129/306 (42%), Gaps = 43/306 (14%)
Query: 301 GEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQM---------------- 344
G + A+ +F M R ++SW +++S +A G++ A + FD+M
Sbjct: 64 GNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMI 123
Query: 345 ----------------PERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMV 388
PE++ VS+ MI G++R F EA L+ E + VK +
Sbjct: 124 KNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE---TPVKFRDSVAS 180
Query: 389 SILTACAHLGALELGEWVKTY-IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ 447
++L + G L G+W + + + + S+++ Y K G + AR F M +
Sbjct: 181 NVLLS----GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTE 236
Query: 448 KDKFIWTAMIVGLAINGHGEEALTMFSNM-IESSITPDDITYIGVLSACTHAGMVEKGRK 506
++ WTAMI G G E+ +F M E + + T + AC +G +
Sbjct: 237 RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQ 296
Query: 507 FFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
+ + ++ ++ ++ + S+ G++ EA V M K +S+ W SL+
Sbjct: 297 IHG-LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK-DSVSWNSLITGLVQR 354
Query: 567 KNVELA 572
K + A
Sbjct: 355 KQISEA 360
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 98/248 (39%), Gaps = 22/248 (8%)
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKP 382
S +S A G + A F QM R VSW AMI Y +A +F EM + V
Sbjct: 55 SQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV-RVTT 113
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
M++ + +LG+ + + D + N ++ + +I + + G ++A +
Sbjct: 114 SYNAMITAMIK----NKCDLGKAYELFCDIPEKNAVSY--ATMITGFVRAGRFDEAEFLY 167
Query: 443 KEMHQK--DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGM 500
E K D ++ G G EA+ +F M + ++ ++ G
Sbjct: 168 AETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV----VSCSSMVHGYCKMGR 223
Query: 501 VEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM----PVKPNSIVW 556
+ R F MT + NV + M+D +AG ++ + L M VK NS
Sbjct: 224 IVDARSLFDRMT-----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTL 278
Query: 557 GSLLGACR 564
+ ACR
Sbjct: 279 AVMFKACR 286
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
QIH + +KM + +D N +++ C + G+ + A ++F I P++ +NTMI GYS
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYC--KCGNTNDAYKIFSCISEPNIVSYNTMISGYSY 516
Query: 129 ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN----DMALKYGKVL 173
K + ++ ++ + +P+ TF LL + D+ KY K +
Sbjct: 517 NGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/676 (27%), Positives = 329/676 (48%), Gaps = 85/676 (12%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
++H + IK G+ D V ++ C ++G++ A +VFD +P + W+T++
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLL--CMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVS---- 175
Query: 129 ISCPKSG-----ISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLD 183
SC ++G + M+ M+ ++PD+ T +++G L+ + + + D
Sbjct: 176 -SCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFD 234
Query: 184 SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXX 243
+ + + + ++S CG + + +IF V+W M+S YNR
Sbjct: 235 LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 244 XXXGVSPNSVTLVLILSACSKLTDLAGGNYV------------YQYLTEGIVE------- 284
G+ PN VTL +LS+C + + G V Y+ L+ +VE
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 285 -------------PNLVMENVLLDMFGACGEMDAAKGVFDNMKTR--------------- 316
N+V N L+ ++ G + A G+F M T+
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 317 -----------------------DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWT 353
D S++ ++ +G +D A F+Q+ R V+W
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 474
Query: 354 AMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 413
+M+ G+ + + EA++LF M S+++ +E T ++++ AC+ +G+LE G+WV + +
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS 534
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMF 473
+ D F +ALIDMY KCG++ A F+ M + W++MI ++G A++ F
Sbjct: 535 GLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTF 593
Query: 474 SNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSR 533
+ M+ES P+++ ++ VLSAC H+G VE+G+ +F M G+ PN H+ C +DLLSR
Sbjct: 594 NQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK-SFGVSPNSEHFACFIDLLSR 652
Query: 534 AGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLL 593
+G LKEA I MP ++ VWGSL+ CR+H+ +++ + + ++ ++ Y LL
Sbjct: 653 SGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLL 712
Query: 594 CNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKL 653
NIYA WE R +R+ M +KK PG S +E++ ++ F AG+++ Q+ EIY L
Sbjct: 713 SNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFL 772
Query: 654 ENMMQDLTNAGYSPDT 669
N +Q+LTN + D+
Sbjct: 773 GN-LQNLTNEEHVVDS 787
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 229/513 (44%), Gaps = 51/513 (9%)
Query: 57 LLERCKSTYQLKQIHSKTIKMG-LSSDPVFGNKVI---AFCCTQESGDVDYARQVFDTIP 112
L C S + Q+H+ + G L DP+ K+I AF G D +R VF+ P
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFM-----GSPDSSRLVFEAFP 61
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMA-LKYGK 171
+P F++ +IK + I +Y +++ + F FP +L+ L G
Sbjct: 62 YPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGG 121
Query: 172 VLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVX 231
+ +K G+D + ++ + + ++ G + A K+F+ ++V W+ ++S
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 232 XXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMEN 291
GV P++VT++ ++ C++L L V+ +T + + + + N
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
LL M+ CG++ +++ +F+ + ++ +SW
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSW------------------------------ 271
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
TAMI Y R +AL F EM S ++P+ T+ S+L++C +G + G+ V +
Sbjct: 272 -TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 412 KNKIN-NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEAL 470
+ +++ N + AL+++Y +CG + + + ++ W ++I A G +AL
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 471 TMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTH---YGCM 527
+F M+ I PD T +SAC +AG+V G++ H I+ +V+ +
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHG-----HVIRTDVSDEFVQNSL 445
Query: 528 VDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
+D+ S++G + A + N + + W S+L
Sbjct: 446 IDMYSKSGSVDSA-STVFNQIKHRSVVTWNSML 477
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 139/341 (40%), Gaps = 40/341 (11%)
Query: 316 RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM 375
RD + T ++ +A G D +R F+ P D + +I + + A+ L+ +
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 376 QMSHVKPDEFTMVSILTACA-HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGN 434
+ +F S+L ACA L +G V I K +++D I ++L+ MY + GN
Sbjct: 92 VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGN 151
Query: 435 VEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSA 494
+ A K F M +D W+ ++ NG +AL MF M++ + PD +T I V+
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 495 CTHAGMVEKGRKFFASMT------------------------------IQHGIKPNVTHY 524
C G + R +T + K N +
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 525 GCMVDLLSRAGHLKEALDVILNM---PVKPNSIVWGSLLGACR----VHKNVELAEMAAK 577
M+ +R ++AL M ++PN + S+L +C + + + A +
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR 331
Query: 578 QIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGI 618
+ EL+P S+ + L +YA C + + V ++ +R I
Sbjct: 332 R--ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 8/318 (2%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
KQIH I+ +S D N +I +SG VD A VF+ I H SV WN+M+ G+S
Sbjct: 425 KQIHGHVIRTDVS-DEFVQNSLIDM--YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ IS++ M ++ + TF +++ ++ +L+ GK + + GL +LF
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLF 540
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
A I +++ CG ++ A +F + +V+W+ M++ Y G
Sbjct: 541 TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG 600
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
PN V + +LSAC + G Y + + V PN +D+ G++ A
Sbjct: 601 TKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAY 660
Query: 308 GVFDNMK-TRDVISWTSIVSGFANTGQIDLARKYFDQMPE---RDYVSWTAMIDGYLRMN 363
M D W S+V+G ++D+ + + + + D +T + + Y
Sbjct: 661 RTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEG 720
Query: 364 HFREALALFREMQMSHVK 381
+ E L M+ S++K
Sbjct: 721 EWEEFRRLRSAMKSSNLK 738
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 288/555 (51%), Gaps = 39/555 (7%)
Query: 47 PHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQ 106
P C + I+ L C+ T ++ +IH +K GL D +K++AF D+ YA
Sbjct: 26 PQC--QKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL---DIRYASS 80
Query: 107 VFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMA 166
+F+ + + ++F++NTMI+GYS P+ S++ + A + D F+F LK + ++
Sbjct: 81 IFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELC 140
Query: 167 LKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN-MGDAWEVVTWNVMLS 225
+ G+ L A++ G ++ A IH + +CG + A K+F+ M + + VT++ +++
Sbjct: 141 VSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMN 200
Query: 226 GYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEP 285
GY +V V N TL+ LSA S L DL+G + + ++
Sbjct: 201 GYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL 260
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMP 345
+L + L+ M+G TG I AR+ FD
Sbjct: 261 DLHLITALIGMYG-------------------------------KTGGISSARRIFDCAI 289
Query: 346 ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEW 405
+D V+W MID Y + E + L R+M+ +KP+ T V +L++CA+ A +G
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRT 349
Query: 406 VKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGH 465
V +++ +I D +G+AL+DMY K G +EKA + F M KD WTAMI G +G
Sbjct: 350 VADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGL 409
Query: 466 GEEALTMFSNMIESS--ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTH 523
EA+T+F+ M E + + P++IT++ VL+AC+H G+V +G + F M + P V H
Sbjct: 410 AREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEH 469
Query: 524 YGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELE 583
YGC+VDLL RAG L+EA ++I N+P+ +S W +LL ACRV+ N +L E ++ E+
Sbjct: 470 YGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMG 529
Query: 584 PENGSVYVLLCNIYA 598
+ + +LL +A
Sbjct: 530 ETHPADAILLAGTHA 544
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 153/437 (35%), Positives = 248/437 (56%), Gaps = 5/437 (1%)
Query: 194 HLFSLCGLV---DLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSP 250
H S+CG + D A+++F+ V+ +N M+ Y+ V G+
Sbjct: 41 HFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWA 100
Query: 251 NSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVF 310
+ T +L +CS L+DL G V+ L + +++++ + G M A+ VF
Sbjct: 101 DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVF 160
Query: 311 DNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALA 370
D M R+V+ W ++ GF ++G ++ F QM ER VSW +MI + REAL
Sbjct: 161 DEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALE 220
Query: 371 LFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTF-IGSALIDMY 429
LF EM PDE T+V++L A LG L+ G+W+ + + + + D +G+AL+D Y
Sbjct: 221 LFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFY 280
Query: 430 FKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS-ITPDDITY 488
K G++E A F++M +++ W +I G A+NG GE + +F MIE + P++ T+
Sbjct: 281 CKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATF 340
Query: 489 IGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP 548
+GVL+ C++ G VE+G + F M + ++ HYG MVDL+SR+G + EA + NMP
Sbjct: 341 LGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMP 400
Query: 549 VKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLRE 608
V N+ +WGSLL ACR H +V+LAE+AA +++++EP N YVLL N+YA RW+++ +
Sbjct: 401 VNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEK 460
Query: 609 VRTIMMERGIKKTPGCS 625
VRT+M + ++K+ G S
Sbjct: 461 VRTLMKKNRLRKSTGQS 477
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 196/465 (42%), Gaps = 68/465 (14%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
+ LL + +L +IH+ ++ L + I+ C + + DYA +VF I +P
Sbjct: 8 LRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLS--NSDYANRVFSHIQNP 65
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLL 174
+V ++N MIK YS + P +S + M + I D +T+ LLK ++ L++GK +
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVH 125
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY------- 227
++ G ++ + L++ G + A K+F+ VV WN+M+ G+
Sbjct: 126 GELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVE 185
Query: 228 ------------------------NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
++ G P+ T+V +L +
Sbjct: 186 RGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISA 245
Query: 264 KLTDLAGGNYVYQYL-TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWT 322
L L G +++ + G+ + + + N L+D + G+++AA +F M+ R+V+SW
Sbjct: 246 SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWN 305
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKP 382
+++SG A G+ + FD M E V+ P
Sbjct: 306 TLISGSAVNGKGEFGIDLFDAMIEEGKVA------------------------------P 335
Query: 383 DEFTMVSILTACAHLGALELGEWV-KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKT 441
+E T + +L C++ G +E GE + +++ K+ T A++D+ + G + +A K
Sbjct: 336 NEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKF 395
Query: 442 FKEMH-QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
K M + +W +++ A HG+ L + M I P +
Sbjct: 396 LKNMPVNANAAMWGSLLS--ACRSHGDVKLAEVAAMELVKIEPGN 438
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 293 bits (751), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/569 (29%), Positives = 305/569 (53%), Gaps = 36/569 (6%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLML-AHNIKPDSFTFP 155
E GD++ +R+VFD+ ++ +WNTMI Y + C I ++L + + I D T+
Sbjct: 263 ELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYL 322
Query: 156 FLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAW 215
+ ++ G+ K + + + + + ++S CG V + +F
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER 382
Query: 216 EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY 275
+VV+WN M+S + + G + +T+ +LSA S L + G +
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH 442
Query: 276 QYLT-EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQI 334
+L +GI M + L+DM+ G + ++ +F+ SG+A
Sbjct: 443 AFLIRQGIQFEG--MNSYLIDMYSKSGLIRISQKLFEG-------------SGYA----- 482
Query: 335 DLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTAC 394
ERD +W +MI GY + H + +FR+M +++P+ T+ SIL AC
Sbjct: 483 -----------ERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPAC 531
Query: 395 AHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWT 454
+ +G+++LG+ + + + ++ + F+ SAL+DMY K G ++ A F + +++ +T
Sbjct: 532 SQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYT 591
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
MI+G +G GE A+++F +M ES I PD IT++ VLSAC+++G++++G K F M
Sbjct: 592 TMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREV 651
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPN-SIVWGSLLGACRVHKNVELAE 573
+ I+P+ HY C+ D+L R G + EA + + + + N + +WGSLLG+C++H +ELAE
Sbjct: 652 YNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAE 711
Query: 574 MAAKQIIELEP-ENGSVY-VLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNG 631
++++ + + +N S Y VLL N+YA ++W+++ +VR M E+G+KK G S +E+ G
Sbjct: 712 TVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAG 771
Query: 632 IIYEFVAGDQSHPQSKEIYAKLENMMQDL 660
+ FV+ DQ HP S EIY ++ + +D+
Sbjct: 772 YVNCFVSRDQEHPHSSEIYDVIDGLAKDM 800
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 155/643 (24%), Positives = 280/643 (43%), Gaps = 80/643 (12%)
Query: 43 SHCDPHCFGETPISLLERCKSTYQLKQ---IHSKTIKMGLSSDPVFGNKVIAFCCT---- 95
++CD + + T L+ C T LK +H I+ +S V N ++ +
Sbjct: 103 TNCDAYTYSST----LKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNA 158
Query: 96 QESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFP 155
+ + D R+VFD + +V WNT+I Y + + +M+ +KP +F
Sbjct: 159 PDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFV 218
Query: 156 FLLKGFTNDMALKYGKVLLDHAVKLGLD--SNLFVQKAFIHLFSLCGLVDLAHKIFNMGD 213
+ + ++K V +KLG + +LFV + I +++ G ++ + ++F+
Sbjct: 219 NVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCV 278
Query: 214 AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG---VSPNSVTLVLILSACSKLTDLAG 270
+ WN M+ Y V G + + VT +L SA S L +
Sbjct: 279 ERNIEVWNTMIGVY--VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVEL 336
Query: 271 GNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFAN 330
G + ++++ E +V+ N L+ M+ CG + + GVF +M+ RDV+SW +++S F
Sbjct: 337 GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQ 396
Query: 331 TGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSI 390
G D E L L EMQ K D T+ ++
Sbjct: 397 NGLDD-------------------------------EGLMLVYEMQKQGFKIDYITVTAL 425
Query: 391 LTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK--EMHQK 448
L+A ++L E+G+ ++ + I + + S LIDMY K G + ++K F+ ++
Sbjct: 426 LSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAER 484
Query: 449 DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFF 508
D+ W +MI G NGH E+ +F M+E +I P+ +T +L AC+ G V+ G++
Sbjct: 485 DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH 544
Query: 509 ASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKN 568
+I+ + NV +VD+ S+AG +K A D + + + NS+ + +++ H
Sbjct: 545 G-FSIRQYLDQNVFVASALVDMYSKAGAIKYAED-MFSQTKERNSVTYTTMILGYGQHG- 601
Query: 569 VELAEMAAKQIIELEPENG--SVYVLLCNIYAAC----------KRWENLREVRTIMMER 616
+ E A + ++ E+G + + +AC K +E +REV I
Sbjct: 602 --MGERAISLFLSMQ-ESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQP-- 656
Query: 617 GIKKTPGCSLMEMNGII------YEFVAGDQSHPQSKEIYAKL 653
C + +M G + YEFV G E++ L
Sbjct: 657 --SSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSL 697
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 129/286 (45%), Gaps = 8/286 (2%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS--VFIWNTMIKG 125
KQ H+ I+ G+ + G +SG + ++++F+ + WN+MI G
Sbjct: 439 KQTHAFLIRQGIQFE---GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISG 495
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
Y++ + ++ ML NI+P++ T +L + ++ GK L +++ LD N
Sbjct: 496 YTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQN 555
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
+FV A + ++S G + A +F+ VT+ M+ GY +
Sbjct: 556 VFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQE 615
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEPNLVMENVLLDMFGACGEMD 304
G+ P+++T V +LSACS + G +++ + E ++P+ + DM G G ++
Sbjct: 616 SGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVN 675
Query: 305 AAKGVFDNMKTRDVIS--WTSIVSGFANTGQIDLARKYFDQMPERD 348
A + I+ W S++ G+++LA +++ + D
Sbjct: 676 EAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFD 721
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 133/304 (43%), Gaps = 20/304 (6%)
Query: 320 SWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMS- 378
S S +S G LAR+ FD +P+ V W +I G++ N EAL + M+ +
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 379 -HVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNV-- 435
D +T S L ACA L+ G+ V ++ + N+ + ++L++MY C N
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 436 ----EKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGV 491
+ RK F M +K+ W +I G EA F M+ + P ++++ V
Sbjct: 161 CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV 220
Query: 492 LSACTHAGMVEKGRKFFASM-TIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK 550
A + + ++K F+ M + ++ + + + G + E+ + + V+
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI-ESSRRVFDSCVE 279
Query: 551 PNSIVWGSLLGA-----CRVHK-NVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWE 604
N VW +++G C V + L + +K+I+ E Y+L + +A ++ E
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE----VTYLLAASAVSALQQVE 335
Query: 605 NLRE 608
R+
Sbjct: 336 LGRQ 339
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 216/332 (65%), Gaps = 6/332 (1%)
Query: 337 ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAH 396
ARK FD++P+ D V W +++GY+R E L +F+EM + ++PDEF++ + LTACA
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 397 LGALELGEWVKTYIDKNK-INNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTA 455
+GAL G+W+ ++ K + I +D F+G+AL+DMY KCG +E A + F+++ +++ F W A
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 456 MIVGLAINGHGEEALTMFSNM-IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
+I G A G+ ++A T + E I PD + +GVL+AC H G +E+GR +M +
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEM 574
+GI P HY C+VDL+ RAG L +ALD+I MP+KP + VWG+LL CR HKNVEL E+
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 575 AAKQIIELEP----ENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMN 630
A + +++LE E + V L NIY + +R +VR ++ +RGI+KTPG SL+E++
Sbjct: 411 AVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVD 470
Query: 631 GIIYEFVAGDQSHPQSKEIYAKLENMMQDLTN 662
GI+ +FV+GD SHP +I+ + + D +
Sbjct: 471 GIVTKFVSGDVSHPNLLQIHTLIHLLSVDASQ 502
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 200/429 (46%), Gaps = 39/429 (9%)
Query: 59 ERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVI-AFC-CTQESGDVDYARQVFDTIPHPSV 116
+RC + Q+K HS I GL + +K++ AF + YA +FD+I P+
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLMLAH---NIKPDSFTFPFLLKGFTNDMALKYGKVL 173
F+++TMI+ SR S P G+ +LLM+ +I P TF FL+ GK +
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 174 LDHAVKLGLD-SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
VK G+ S+ VQ + ++ L+ A K+F+ +VV W+V+++GY R
Sbjct: 139 HCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGL 198
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEG-IVEPNLVMEN 291
G+ P+ ++ L+AC+++ LA G ++++++ + +E ++ +
Sbjct: 199 GSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGT 258
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
L+DM+ CG ++ A VF+ + R+V SW +++ G+A G A D++ ER+
Sbjct: 259 ALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRI-ERE--- 314
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
DG +KPD ++ +L ACAH G LE G + ++
Sbjct: 315 -----DG---------------------IKPDSVVLLGVLAACAHGGFLEEGRTMLENME 348
Query: 412 -KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKD-KFIWTAMIVGLAINGHGEEA 469
+ I S ++D+ + G ++ A ++M K +W A++ G + + E
Sbjct: 349 ARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 470 LTMFSNMIE 478
N+++
Sbjct: 409 ELAVQNLLD 417
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 380 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN-NDTFIGSALIDMYFKCGNVEKA 438
+ P T ++ AC +G+ + ++ KN + +D + + ++ +Y + + A
Sbjct: 112 ITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDA 171
Query: 439 RKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHA 498
RK F E+ Q D W ++ G G G E L +F M+ I PD+ + L+AC
Sbjct: 172 RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQV 231
Query: 499 GMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGS 558
G + +G+ + + I+ +V +VD+ ++ G ++ A++V + + N W +
Sbjct: 232 GALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-TRRNVFSWAA 290
Query: 559 LLGACRVHKNVELAEMAAKQIIELEPENG--SVYVLLCNIYAACKRWENLREVRTIM--M 614
L+G + A+ A + +E E+G V+L + AAC L E RT++ M
Sbjct: 291 LIGG---YAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENM 347
Query: 615 ERGIKKTP 622
E TP
Sbjct: 348 EARYGITP 355
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 185/644 (28%), Positives = 312/644 (48%), Gaps = 83/644 (12%)
Query: 92 FCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDS 151
+C +E G +ARQ+FD +P ++ +N++I GY+++ + + ++L N+K D
Sbjct: 92 YCKCRELG---FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDK 148
Query: 152 FTFPFLLKGFTNDMA-LKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN 210
FT+ L GF + L G++L V GL +F+ I ++S CG +D A +F+
Sbjct: 149 FTYAGAL-GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD 207
Query: 211 MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS-KLTD-- 267
D + V+WN ++SGY RV G++ + L +L AC L +
Sbjct: 208 RCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGF 267
Query: 268 LAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSG 327
+ G ++ Y + +E ++V+ LLDM+ G + A +F M +++V+++ +++SG
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISG 327
Query: 328 FANTGQI-------------DLARKYFDQMP----------------------------- 345
F +I D+ R+ + P
Sbjct: 328 FLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN 387
Query: 346 --ERDYVSWTAMIDGYLRMNHFREALALF------------------------------- 372
+ D +A+I+ Y M + + F
Sbjct: 388 NFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLF 447
Query: 373 REMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKC 432
R++ SH++P+E+T+ +++ACA AL GE ++ Y K+ I+ T + ++ I MY K
Sbjct: 448 RQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 433 GNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVL 492
GN+ A + F E+ D ++AMI LA +G EAL +F +M I P+ ++GVL
Sbjct: 508 GNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
Query: 493 SACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPN 552
AC H G+V +G K+F M + I PN H+ C+VDLL R G L +A ++IL+ + +
Sbjct: 568 IACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDH 627
Query: 553 SIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTI 612
+ W +LL +CRV+K+ + + A++++ELEPE YVLL NIY + EVR +
Sbjct: 628 PVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 687
Query: 613 MMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENM 656
M +RG+KK P S + + + F D SHP S+ IY LE M
Sbjct: 688 MRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 5/212 (2%)
Query: 390 ILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKD 449
+ A G++ LG+ ++ K+ +N ++ + L++MY KC + AR+ F M +++
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 450 KFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFA 509
+ ++I G G E+A+ +F E+++ D TY G L C ++ G +
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLH 171
Query: 510 SMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL-GACRVHKN 568
+ + +G+ V ++D+ S+ G L +A+ + + + + + W SL+ G RV
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMS-LFDRCDERDQVSWNSLISGYVRVGAA 230
Query: 569 VELAEMAAKQIIELEPENGSVYVLLCNIYAAC 600
E + AK + + N + Y L + A C
Sbjct: 231 EEPLNLLAK--MHRDGLNLTTYALGSVLKACC 260
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 292 bits (748), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 181/612 (29%), Positives = 298/612 (48%), Gaps = 41/612 (6%)
Query: 54 PISLLERCKSTYQLKQI---HSKTIKMGLSSDPVFGNKVI-AFCCTQESGDVDYARQVFD 109
P++LLE ++ Q+ H + G D N ++ +C GD A+ +FD
Sbjct: 147 PVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD---AKDLFD 203
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+ + WNTMI GY+ + + + M ++PD TF L L+
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
G++L VK G D ++ ++ A I ++ CG + ++++ +VV W VM+SG R
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
+ G +S + ++++C++L G V+ Y
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY------------ 371
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY 349
V + T D + S+++ +A G +D + F++M ERD
Sbjct: 372 -------------------VLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDL 412
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQMSHVKP-DEFTMVSILTACAHLGALELGEWVKT 408
VSW A+I GY + +AL LF EM+ V+ D FT+VS+L AC+ GAL +G+ +
Sbjct: 413 VSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHC 472
Query: 409 YIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEE 468
+ ++ I + + +AL+DMY KCG +E A++ F + KD W +I G +G G+
Sbjct: 473 IVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDI 532
Query: 469 ALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMV 528
AL ++S + S + P+ + ++ VLS+C+H GMV++G K F+SM G++PN H C+V
Sbjct: 533 ALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVV 592
Query: 529 DLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGS 588
DLL RA +++A +P+ V G +L ACR + E+ ++ + +IEL+P +
Sbjct: 593 DLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAG 652
Query: 589 VYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKE 648
YV L + +AA KRW+++ E M G+KK PG S +EMNG F SH
Sbjct: 653 HYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTV 712
Query: 649 IYAKL--ENMMQ 658
KL MMQ
Sbjct: 713 SLLKLLSREMMQ 724
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 207/455 (45%), Gaps = 38/455 (8%)
Query: 119 WNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAV 178
+N+ I S K +S + MLA+ + PD+FTFP LLK + L +G + +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 179 KLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXX 238
G S+ ++ + ++L++ GL+ A K+F +VV W M+ Y+R
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 239 XXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFG 298
G+ P VTL+ +LS ++T L ++ + + ++ + N +L+++
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 299 ACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
C + AK +FD M+ RD++SW +++SG+A+ G +
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMS----------------------- 227
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
E L L M+ ++PD+ T + L+ + LE+G + I K + D
Sbjct: 228 --------EILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVD 279
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
+ +ALI MY KCG E + + + + KD WT MI GL G E+AL +FS M++
Sbjct: 280 MHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
S V+++C G + G ++HG + ++ + ++ GHL
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHG-YVLRHGYTLDTPALNSLITMYAKCGHLD 398
Query: 539 EALDVILNMPVKPNSIVWGSLLGACRVHKNVELAE 573
++L VI + + + W +++ +NV+L +
Sbjct: 399 KSL-VIFERMNERDLVSWNAIISG--YAQNVDLCK 430
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 291 bits (746), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 175/598 (29%), Positives = 310/598 (51%), Gaps = 38/598 (6%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+Q+H IK G + G+ ++ E V+ A + F I P+ WN +I G+
Sbjct: 121 EQVHGLVIKGGYECNVYVGSSLVDMYAKCER--VEDAFEAFKEISEPNSVSWNALIAGFV 178
Query: 128 RISCPKSGISMYLLM-LAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNL 186
++ K+ + LM + + D+ TF LL + M K + +KLGL +
Sbjct: 179 QVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEI 238
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFN-MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
+ A I ++ CG V A ++F+ +G + ++++WN M++G+++
Sbjct: 239 TICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR 298
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMF--GACGEM 303
V + T +LSACS G ++ + + +E N L+ M+ G M
Sbjct: 299 HWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTM 358
Query: 304 DAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMN 363
+ A +F+++K++D+ISW SI++GFA G + A K+F YLR
Sbjct: 359 EDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFF----------------SYLR-- 400
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
S +K D++ ++L +C+ L L+LG+ + K+ ++ F+ S
Sbjct: 401 -------------SSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVIS 447
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKDKFI-WTAMIVGLAINGHGEEALTMFSNMIESSIT 482
+LI MY KCG +E ARK F+++ K + W AMI+G A +G G+ +L +FS M ++
Sbjct: 448 SLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVK 507
Query: 483 PDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALD 542
D +T+ +L+AC+H G++++G + M + I+P + HY VDLL RAG + +A +
Sbjct: 508 LDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKE 567
Query: 543 VILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKR 602
+I +MP+ P+ +V + LG CR +E+A A ++E+EPE+ YV L ++Y+ K+
Sbjct: 568 LIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKK 627
Query: 603 WENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDL 660
WE V+ +M ERG+KK PG S +E+ + F A D+S+P ++IY ++++ Q++
Sbjct: 628 WEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 685
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 184/403 (45%), Gaps = 19/403 (4%)
Query: 67 LKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFI-WNTMIKG 125
LKQ+H+K +K+GL + N +I+ + G V A++VFD + I WN+MI G
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMIS--SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAG 279
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+S+ +S +++ M H ++ D +T+ LL + + +GK L +K GL+
Sbjct: 280 FSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQV 339
Query: 186 LFVQKAFIHLFSL--CGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXX 243
A I ++ G ++ A +F + ++++WN +++G+ +
Sbjct: 340 TSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYL 399
Query: 244 XXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE-GIVEPNLVMENVLLDMFGACGE 302
+ + +L +CS L L G ++ T+ G V V+ ++++ M+ CG
Sbjct: 400 RSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV-MYSKCGI 458
Query: 303 MDAAKGVFDNMKTR-DVISWTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMID 357
+++A+ F + ++ ++W +++ G+A G ++ F QM + D+V++TA++
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILT 518
Query: 358 GYLRMNHFREALALFREMQ-MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN 416
+E L L M+ + ++P M A LG L K I+ +N
Sbjct: 519 ACSHTGLIQEGLELLNLMEPVYKIQP---RMEHYAAAVDLLGRAGLVNKAKELIESMPLN 575
Query: 417 NDTFIGSALIDMYFKCGNVEKARKT---FKEMHQKDKFIWTAM 456
D + + + CG +E A + E+ +D F + ++
Sbjct: 576 PDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSL 618
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
D+ I+ + G + A FD+MP+RD VSW MI GY +A LF M+
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
S D ++ +L A + +LGE V + K + ++GS+L+DMY KC VE
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 437 KARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM-IESSITPDDITYIGVLSAC 495
A + FKE+ + + W A+I G + A + M +++++T D T+ +L+
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 496 THAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIV 555
++ A + ++ G++ +T M+ + G + +A V + + I
Sbjct: 214 DDPMFCNLLKQVHAKV-LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLIS 272
Query: 556 WGSLLGACRVHKNVELAEMAAKQIIELE 583
W S++ H EL E A + I+++
Sbjct: 273 WNSMIAGFSKH---ELKESAFELFIQMQ 297
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 162/397 (40%), Gaps = 37/397 (9%)
Query: 169 YGKVLLDH--AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG 226
+ K+ L H A+K G S+++V + + G + A+ +F+ + V+WN M+SG
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN 286
Y G + + +L + + G V+ + +G E N
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 287 LVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
+ + + L+DM+ C ++ A F + + +SW ++++GF I A M
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM 195
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
+ V+ A F L L + M L H L+LG
Sbjct: 196 KAAVTMDA--------GTFAPLLTLLDD-----------PMFCNLLKQVHAKVLKLG--- 233
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGH 465
+ ++ I +A+I Y CG+V A++ F + KD W +MI G + +
Sbjct: 234 --------LQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHEL 285
Query: 466 GEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYG 525
E A +F M + D TY G+LSAC+ G+ M I+ G++ +
Sbjct: 286 KESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHG-MVIKKGLEQVTSATN 344
Query: 526 CMVDLLSR--AGHLKEALDVILNMPVKPNSIVWGSLL 560
++ + + G +++AL + ++ K + I W S++
Sbjct: 345 ALISMYIQFPTGTMEDALSLFESLKSK-DLISWNSII 380
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 291 bits (746), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 172/566 (30%), Positives = 292/566 (51%), Gaps = 38/566 (6%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K IHS ++D ++ F + G+++ A +VFD +P + WN MI G+S
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDF--YAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 128 RISCPKSGISMYLLMLA-HNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNL 186
C I ++L M + P+ T + AL+ GK + + ++G ++L
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY--NRVXXXXXXXXXXXXXX 244
V+ + +++ + A ++F++ VTW+ M+ GY N +
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 245 XXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMD 304
V + LIL C++ DL+GG V+ Y + +L ++N
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQN------------- 347
Query: 305 AAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
+I+S +A G + A + F ++ +D +S+ ++I G +
Sbjct: 348 ------------------TIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCR 389
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSA 424
E+ LF EM+ S ++PD T++ +LTAC+HL AL G Y + +T I +A
Sbjct: 390 PEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNA 449
Query: 425 LIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPD 484
L+DMY KCG ++ A++ F MH++D W M+ G I+G G+EAL++F++M E+ + PD
Sbjct: 450 LMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPD 509
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTI-QHGIKPNVTHYGCMVDLLSRAGHLKEALDV 543
++T + +LSAC+H+G+V++G++ F SM+ + P + HY CM DLL+RAG+L EA D
Sbjct: 510 EVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDF 569
Query: 544 ILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRW 603
+ MP +P+ V G+LL AC +KN EL +K++ L S+ VLL N Y+A +RW
Sbjct: 570 VNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESL-VLLSNTYSAAERW 628
Query: 604 ENLREVRTIMMERGIKKTPGCSLMEM 629
E+ +R I +RG+ KTPG S +++
Sbjct: 629 EDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 232/520 (44%), Gaps = 42/520 (8%)
Query: 55 ISLLERCKSTYQL---KQIHSKTIK--MGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
+SLLE C + L + IH +K + LSS V N + E V+ AR VFD
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNE---VELARHVFD 59
Query: 110 TIPHPSV--FIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMAL 167
IPHP + W+ MI+ Y+ + + +Y ML ++P +T+PF+LK A+
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 168 KYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY 227
GK++ H ++++V A + ++ CG +++A K+F+ ++V WN M+SG+
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 228 N-RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN 286
+ G+SPN T+V + A + L G V+ Y T +
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 287 LVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
LV++ +LD++ + A+ VFD ++ ++W++++ G+ I A + F QM
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
D V+ + A+ L IL CA G L G V
Sbjct: 300 NDNVAMVTPV-----------AIGL------------------ILMGCARFGDLSGGRCV 330
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHG 466
Y K D + + +I Y K G++ A + F E+ KD + ++I G +N
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRP 390
Query: 467 EEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGC 526
EE+ +F M S I PD T +GVL+AC+H + G + HG N +
Sbjct: 391 EESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVV-HGYAVNTSICNA 449
Query: 527 MVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
++D+ ++ G L A V M K + + W ++L +H
Sbjct: 450 LMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTMLFGFGIH 488
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/560 (30%), Positives = 287/560 (51%), Gaps = 35/560 (6%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
++G++ AR++F+ +P V N+++ GY + + ++ + N D+ T
Sbjct: 136 KAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTT 192
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDS---------NLFVQ------------------ 189
+LK ALK GK + + G++ N++ +
Sbjct: 193 VLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPD 252
Query: 190 ----KAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
A I ++ CG V+ + +F+ V+ WN M+SGY
Sbjct: 253 DHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGY-IANNMKMEALVLFNEMR 311
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
+S TL +++AC L L G ++ + + + ++V+ + LLDM+ CG
Sbjct: 312 NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPME 371
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A +F +++ D I S++ + + G+ID A++ F+++ + +SW +M +G+ +
Sbjct: 372 ACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCT 431
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
E L F +M + DE ++ S+++ACA + +LELGE V +++D + S+L
Sbjct: 432 VETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSL 491
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
ID+Y KCG VE R+ F M + D+ W +MI G A NG G EA+ +F M + I P
Sbjct: 492 IDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQ 551
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
IT++ VL+AC + G+VE+GRK F SM + HG P+ H+ CMVDLL+RAG+++EA++++
Sbjct: 552 ITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVE 611
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
MP + +W S+L C + + + AA++IIELEPEN YV L I+A WE+
Sbjct: 612 EMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWES 671
Query: 606 LREVRTIMMERGIKKTPGCS 625
VR +M E + K PG S
Sbjct: 672 SALVRKLMRENNVTKNPGSS 691
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 135/543 (24%), Positives = 241/543 (44%), Gaps = 82/543 (15%)
Query: 55 ISLLERCKSTYQ---LKQIHSKTIKMG-LSSDPVFGNKVIAFCCTQESGDVDYARQVFDT 110
+ LL+ C S + +Q + +K G LSS + N ++ SG + AR +FD
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQM--YSRSGKMGIARNLFDE 87
Query: 111 IPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYG 170
+P + F WNTMI+GY ++ + G S+ + + D +++ ++ GF
Sbjct: 88 MPDRNYFSWNTMIEGY--MNSGEKGTSLRFFDMMP--ERDGYSWNVVVSGFAK------- 136
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRV 230
G + +A ++FN +VVT N +L GY
Sbjct: 137 ----------------------------AGELSVARRLFNAMPEKDVVTLNSLLHGY--- 165
Query: 231 XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVME 290
S +++TL +L AC++L L G ++ + G VE + M
Sbjct: 166 ILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN 225
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV 350
+ L++++ CG++ A + + ++ D S ++++SG+AN G+++ +R FD+ R +
Sbjct: 226 SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 351 SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYI 410
W +MI GY+ N EAL LF EM+ + + D T+ +++ AC LG LE G+ + +
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 411 DKNKINNDTFIGSALIDM-------------------------------YFKCGNVEKAR 439
K + +D + S L+DM YF CG ++ A+
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 440 KTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAG 499
+ F+ + K W +M G + NG E L F M + + D+++ V+SAC
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 500 MVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSL 559
+E G + FA TI G+ + ++DL + G ++ V M VK + + W S+
Sbjct: 465 SLELGEQVFARATIV-GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSM 522
Query: 560 LGA 562
+
Sbjct: 523 ISG 525
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 140/316 (44%), Gaps = 22/316 (6%)
Query: 44 HCDPHCFG--------ETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIA--FC 93
HC FG T + + +C S + ++ S+ S D + N +I F
Sbjct: 341 HCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV----ESYDTILLNSMIKVYFS 396
Query: 94 CTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFT 153
C G +D A++VF+ I + S+ WN+M G+S+ C + + M ++ D +
Sbjct: 397 C----GRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVS 452
Query: 154 FPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGD 213
++ + +L+ G+ + A +GLDS+ V + I L+ CG V+ ++F+
Sbjct: 453 LSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMV 512
Query: 214 AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY 273
+ V WN M+SGY G+ P +T +++L+AC+ + G
Sbjct: 513 KSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRK 572
Query: 274 VYQYLT--EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMK-TRDVISWTSIVSGFAN 330
+++ + G V P+ + ++D+ G ++ A + + M D W+SI+ G
Sbjct: 573 LFESMKVDHGFV-PDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVA 631
Query: 331 TGQIDLARKYFDQMPE 346
G + +K +++ E
Sbjct: 632 NGYKAMGKKAAEKIIE 647
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/587 (28%), Positives = 282/587 (48%), Gaps = 33/587 (5%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+ +H+ +K L S G+ ++ + G +D + +VF +P + W +I G
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDM--YKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
K G++ + M D++TF LK +KYGK + H + G + L
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLC 245
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V + +++ CG + +F +VV+W ++ Y R+
Sbjct: 246 VANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQ 305
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
V PN T + SAC+ L+ L G ++ + + +L + N ++ M+ CG + +A
Sbjct: 306 VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSAS 365
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
+F M+ RD+ +SW+ +I GY + E
Sbjct: 366 VLFQGMRCRDI-------------------------------ISWSTIIGGYCQAGFGEE 394
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
F M+ S KP +F + S+L+ ++ +E G V + ++ + S+LI+
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
MY KCG++++A F E + D TAMI G A +G +EA+ +F ++ PD +T
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVT 514
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
+I VL+ACTH+G ++ G +F M + ++P HYGCMVDLL RAG L +A +I M
Sbjct: 515 FISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEM 574
Query: 548 PVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLR 607
K + +VW +LL AC+ ++E AA++I+EL+P + V L NIY++ E
Sbjct: 575 SWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAA 634
Query: 608 EVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLE 654
VR M +G+ K PG S +++ + FV+GD+ HPQS++IY LE
Sbjct: 635 NVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 201/445 (45%), Gaps = 34/445 (7%)
Query: 98 SGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLM--LAHNIKPDSFTFP 155
+G++ ARQVFD +PH + W ++IK Y + + ++ M + H + PD+
Sbjct: 53 AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 156 FLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAW 215
+LK + YG+ L +AVK L S+++V + + ++ G +D + ++F+
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 216 EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY 275
VTW +++G ++ T + L AC+ L + G ++
Sbjct: 173 NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 276 QYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQID 335
++ L + N L M+ CGEM +F+NM RDV+SWTS
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTS------------ 280
Query: 336 LARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
+I Y R+ +A+ F +M+ S V P+E T S+ +ACA
Sbjct: 281 -------------------LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Query: 396 HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTA 455
L L GE + + +N+ + ++++ MY CGN+ A F+ M +D W+
Sbjct: 322 SLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWST 381
Query: 456 MIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQH 515
+I G G GEE FS M +S P D +LS + ++E GR+ A + +
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHA-LALCF 440
Query: 516 GIKPNVTHYGCMVDLLSRAGHLKEA 540
G++ N T ++++ S+ G +KEA
Sbjct: 441 GLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 164/373 (43%), Gaps = 37/373 (9%)
Query: 194 HLFSL--CGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX--GVS 249
HL SL G + A ++F+ ++V+W ++ Y VS
Sbjct: 46 HLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVS 105
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
P++ L ++L AC + +++A G ++ Y + + ++ + + LLDM+
Sbjct: 106 PDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMY------------ 153
Query: 310 FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREAL 369
G+ID + + F +MP R+ V+WTA+I G + ++E L
Sbjct: 154 -------------------KRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGL 194
Query: 370 ALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMY 429
F EM S D +T L ACA L ++ G+ + T++ + ++L MY
Sbjct: 195 TYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMY 254
Query: 430 FKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYI 489
+CG ++ F+ M ++D WT++IV G +A+ F M S + P++ T+
Sbjct: 255 TECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFA 314
Query: 490 GVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPV 549
+ SAC + G + ++ + G+ +++ M+ + S G+L A + M
Sbjct: 315 SMFSACASLSRLVWGEQLHCNV-LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRC 373
Query: 550 KPNSIVWGSLLGA 562
+ + I W +++G
Sbjct: 374 R-DIISWSTIIGG 385
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 146/337 (43%), Gaps = 10/337 (2%)
Query: 52 ETPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVF 108
+T S+ C S +L +Q+H + +GL+ N ++ T G++ A +F
Sbjct: 311 QTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYST--CGNLVSASVLF 368
Query: 109 DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALK 168
+ + W+T+I GY + + G + M KP F LL N ++
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIE 428
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
G+ + A+ GL+ N V+ + I+++S CG + A IF D ++V+ M++GY
Sbjct: 429 GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEPNL 287
G P+SVT + +L+AC+ L G + + + E + P
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAK 548
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMK-TRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
++D+ G + A+ + + M +D + WT+++ G I+ R+ +++ E
Sbjct: 549 EHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE 608
Query: 347 RDYVSWTAMI---DGYLRMNHFREALALFREMQMSHV 380
D TA++ + Y + EA + + M+ V
Sbjct: 609 LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 645
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 136/320 (42%), Positives = 210/320 (65%), Gaps = 6/320 (1%)
Query: 337 ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAH 396
ARK FD++P+ D V W +++GY+R E L +FREM + ++PDEF++ + LTACA
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 397 LGALELGEWVKTYIDKNK-INNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTA 455
+GAL G+W+ ++ K I +D F+G+AL+DMY KCG +E A + FK++ +++ F W A
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 456 MIVGLAINGHGEEALTMFSNM-IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
+I G A G+ ++A+T + E I PD + +GVL+AC H G +E+GR +M +
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEM 574
+ I P HY C+VDL+ RAG L +AL++I MP+KP + VWG+LL CR HKNVEL E+
Sbjct: 351 YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 575 AAKQIIELEP----ENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMN 630
A K +++LE E + V L NIY + +R +VR ++ +RG++KTPG S++E++
Sbjct: 411 AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVD 470
Query: 631 GIIYEFVAGDQSHPQSKEIY 650
G + +FV+GD SHP +I+
Sbjct: 471 GNVTKFVSGDVSHPNLLQIH 490
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 200/429 (46%), Gaps = 39/429 (9%)
Query: 59 ERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVI-AFC-CTQESGDVDYARQVFDTIPHPSV 116
+RC + Q+K HS I GL + +K++ AF + YA +FD+I P+
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLMLAH---NIKPDSFTFPFLLKGFTNDMALKYGKVL 173
F+++TMI+ SR S P G+ +LLM+ +I P TF FL+ GK +
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 174 LDHAVKLGLD-SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
VK G+ S+ VQ + ++ L+ A K+F+ +VV W+V+++GY R
Sbjct: 139 HCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGL 198
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE-GIVEPNLVMEN 291
G+ P+ ++ L+AC+++ LA G ++++++ + +E ++ +
Sbjct: 199 GSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGT 258
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
L+DM+ CG ++ A VF + R+V SW +++ G+A G A +++ ER+
Sbjct: 259 ALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERL-ERE--- 314
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
DG +KPD ++ +L ACAH G LE G + ++
Sbjct: 315 -----DG---------------------IKPDSVVLLGVLAACAHGGFLEEGRSMLENME 348
Query: 412 -KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKD-KFIWTAMIVGLAINGHGEEA 469
+ +I S ++D+ + G ++ A ++M K +W A++ G + + E
Sbjct: 349 ARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 470 LTMFSNMIE 478
N+++
Sbjct: 409 ELAVKNLLD 417
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 116/248 (46%), Gaps = 9/248 (3%)
Query: 380 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN-NDTFIGSALIDMYFKCGNVEKA 438
+ P T ++ AC +G+ + ++ KN + +D+ + + ++ +Y + + A
Sbjct: 112 IAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDA 171
Query: 439 RKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHA 498
RK F E+ Q D W ++ G G G E L +F M+ + PD+ + L+AC
Sbjct: 172 RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQV 231
Query: 499 GMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGS 558
G + +G+ + + I+ +V +VD+ ++ G ++ A++V + + N W +
Sbjct: 232 GALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TRRNVFSWAA 290
Query: 559 LLGACRVHKNVELAEMAAKQIIELEPENG--SVYVLLCNIYAACKRWENLREVRTIM--M 614
L+G + A+ A + LE E+G V+L + AAC L E R+++ M
Sbjct: 291 LIGGYAAYG---YAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM 347
Query: 615 ERGIKKTP 622
E + TP
Sbjct: 348 EARYEITP 355
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/597 (29%), Positives = 289/597 (48%), Gaps = 35/597 (5%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+QIH +KMGL +DP +++ + G V A VF + + IWN M+ Y+
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSM--YSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
S + ++ M ++ PDSFT ++ + YGK + K + S
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST 409
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY--NRVXXXXXXXXXXXXXXX 245
++ A + L+S CG A+ +F + ++V W ++SG N
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 469
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
+ P+S + + +AC+ L L G V+ + + + N+ + + L+D++ CG
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCG---- 525
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
++A K F M + V+W +MI Y R N
Sbjct: 526 ---------------------------LPEMALKVFTSMSTENMVAWNSMISCYSRNNLP 558
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
++ LF M + PD ++ S+L A + +L G+ + Y + I +DT + +AL
Sbjct: 559 ELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNAL 618
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
IDMY KCG + A FK+M K W MI G +G AL++F M ++ +PDD
Sbjct: 619 IDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDD 678
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
+T++ ++SAC H+G VE+G+ F M +GI+PN+ HY MVDLL RAG L+EA I
Sbjct: 679 VTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIK 738
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
MP++ +S +W LL A R H NVEL ++A++++ +EPE GS YV L N+Y
Sbjct: 739 AMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNE 798
Query: 606 LREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTN 662
++ +M E+G+ K PGCS +E++ F +G S P EI+ L + ++ +
Sbjct: 799 AAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVD 855
Score = 172 bits (436), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 236/529 (44%), Gaps = 51/529 (9%)
Query: 56 SLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDT-- 110
SLL+ C + L K IH + +G DP ++ + G +DYA QVFD
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYV--KCGFLDYAVQVFDGWS 122
Query: 111 -----IPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDM 165
+ V +WN+MI GY + K G+ + ML ++PD+F+ ++ +
Sbjct: 123 QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182
Query: 166 ALKY--GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF-NMGDAWEVVTWNV 222
+ GK + ++ LD++ F++ A I ++ GL A ++F + D VV WNV
Sbjct: 183 NFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNV 242
Query: 223 MLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI 282
M+ G+ V S + L ACS+ + G ++ + +
Sbjct: 243 MIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302
Query: 283 VEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFD 342
+ + + LL M+ CG + A+ VF + + + W ++V+ +A
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA------------- 349
Query: 343 QMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALEL 402
E DY GY AL LF M+ V PD FT+ ++++ C+ LG
Sbjct: 350 ---ENDY--------GY-------SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNY 391
Query: 403 GEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAI 462
G+ V + K I + + I SAL+ +Y KCG A FK M +KD W ++I GL
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK 451
Query: 463 NGHGEEALTMFSNMI--ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN 520
NG +EAL +F +M + S+ PD V +AC + G + SM I+ G+ N
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM-IKTGLVLN 510
Query: 521 VTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNV 569
V ++DL S+ G + AL V +M + N + W S++ +C N+
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNL 557
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 208/486 (42%), Gaps = 58/486 (11%)
Query: 152 FTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM 211
FTFP LLK + L YGK + V LG + F+ + ++++ CG +D A ++F
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF-- 118
Query: 212 GDAW----------EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSA 261
D W +V WN M+ GY + GV P++ +L +++S
Sbjct: 119 -DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV 177
Query: 262 CSKLTDL--AGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVI 319
K + G ++ ++ ++ + ++ L+DM+
Sbjct: 178 MCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMY---------------------- 215
Query: 320 SWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSH 379
F ID R + + + + V W MI G+ +L L+ + +
Sbjct: 216 --------FKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNS 267
Query: 380 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKAR 439
VK + L AC+ G + + K ++ND ++ ++L+ MY KCG V +A
Sbjct: 268 VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAE 327
Query: 440 KTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAG 499
F + K IW AM+ A N +G AL +F M + S+ PD T V+S C+ G
Sbjct: 328 TVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLG 387
Query: 500 MVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSL 559
+ G+ A + + I+ T ++ L S+ G +A V +M K + + WGSL
Sbjct: 388 LYNYGKSVHAEL-FKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSL 445
Query: 560 L-GACRVHKNVELAEMAAKQIIELEPENGSVYV---LLCNIYAACKRWENLR---EVRTI 612
+ G C KN + E A K +++ ++ S+ ++ ++ AC E LR +V
Sbjct: 446 ISGLC---KNGKFKE-ALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGS 501
Query: 613 MMERGI 618
M++ G+
Sbjct: 502 MIKTGL 507
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 285/576 (49%), Gaps = 43/576 (7%)
Query: 58 LERCKSTYQLKQ---IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
+ C + LK+ +H +K GL+S + + +F +SG+ A F +
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSF--YSKSGNPSEAYLSFRELGDE 294
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLL 174
+F W ++I +R + M+ M + PD L+ M + GK
Sbjct: 295 DMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFH 354
Query: 175 DHAVK--LGLDSNLFVQKAFIHLFSLCGLVDLAHKIF-NMGDAWEVVTWNVMLSGYNRVX 231
++ LDS V + + ++ L+ +A K+F + + WN ML GY ++
Sbjct: 355 GFVIRHCFSLDST--VCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMK 412
Query: 232 XXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMEN 291
G+ +S + ++S+CS + + G ++ Y+ + ++ + + N
Sbjct: 413 CHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVN 472
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
L+D++G G++ A +F T + ++
Sbjct: 473 SLIDLYGKMGDLTVAWRMFCEADT--------------------------------NVIT 500
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
W AMI Y+ +A+ALF M + KP T+V++L AC + G+LE G+ + YI
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
+ + + + +ALIDMY KCG++EK+R+ F +QKD W MI G ++G E A+
Sbjct: 561 ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIA 620
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
+F M ES + P T++ +LSACTHAG+VE+G+K F M Q+ +KPN+ HY C+VDLL
Sbjct: 621 LFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLL 679
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYV 591
SR+G+L+EA +++MP P+ ++WG+LL +C H E+ A++ + +P+N Y+
Sbjct: 680 SRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYI 739
Query: 592 LLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLM 627
+L N+Y+A +WE R +M E G+ K G S++
Sbjct: 740 MLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 146/719 (20%), Positives = 279/719 (38%), Gaps = 104/719 (14%)
Query: 27 KRLITNAPAITAKCYSSHCDPHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFG 86
+RL+ +T + SS + + L ++ S L++ ++ I GLS +
Sbjct: 3 RRLLKPNLVVTLRKLSSSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVA 62
Query: 87 NKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN 146
+K+I+ + G + + +VF + +F+WN++IK + + + ML
Sbjct: 63 SKLISSYASY--GKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSG 120
Query: 147 IKPDSFTFPFLLKG-----------FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHL 195
PD FT P ++ F + + LK+G G D N V +F++
Sbjct: 121 QSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG----------GFDRNTAVGASFVYF 170
Query: 196 FSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVS---PNS 252
+S CG + A +F+ +VV W ++SG+ + G PN
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 253 VTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDN 312
TL ACS L L G ++ + + + + +++ + + G A F
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 313 MKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALF 372
+ D+ SWTSI++ A +G ++ E+ +F
Sbjct: 291 LGDEDMFSWTSIIASLARSGDME-------------------------------ESFDMF 319
Query: 373 REMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKC 432
EMQ + PD + ++ + + G+ ++ ++ + D+ + ++L+ MY K
Sbjct: 320 WEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKF 379
Query: 433 GNVEKARKTFKEMHQK-DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGV 491
+ A K F + ++ +K W M+ G + + +F + I D + V
Sbjct: 380 ELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSV 439
Query: 492 LSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA----------- 540
+S+C+H G V G+ ++ + ++ ++DL + G L A
Sbjct: 440 ISSCSHIGAVLLGKSLHC-YVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNV 498
Query: 541 ----------------------LDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQ 578
D +++ KP+SI +LL AC ++E +M +
Sbjct: 499 ITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRY 558
Query: 579 IIELEPE-NGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGC-----SLMEMNGI 632
I E E E N S+ L ++YA C E RE + + G +K C S M+G
Sbjct: 559 ITETEHEMNLSLSAALIDMYAKCGHLEKSRE----LFDAGNQKDAVCWNVMISGYGMHGD 614
Query: 633 IYEFVAGDQSHPQS--KEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHS 689
+ +A +S K ++ T+AG ++FL + + D + L +S
Sbjct: 615 VESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYS 673
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 285 bits (730), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 154/475 (32%), Positives = 264/475 (55%), Gaps = 7/475 (1%)
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
L+ N A K GK + +K G +L + + L CG + A ++F+ +
Sbjct: 41 LQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTL 100
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK-----LTDLAGGN 272
+N M+SGY + G + TL ++L A + + +
Sbjct: 101 SAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCR 160
Query: 273 YVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTG 332
V+ + + VE + V+ L+D + G++++A+ VF+ MK +V+ TS++SG+ N G
Sbjct: 161 LVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQG 220
Query: 333 QIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF-REALALFREMQMSHVKPDEFTMVSIL 391
++ A + F+ +D V + AM++G+ R + ++ ++ MQ + P+ T S++
Sbjct: 221 FVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVI 280
Query: 392 TACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKF 451
AC+ L + E+G+ V I K+ + +GS+L+DMY KCG + AR+ F +M +K+ F
Sbjct: 281 GACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVF 340
Query: 452 IWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASM 511
WT+MI G NG+ EEAL +F+ M E I P+ +T++G LSAC+H+G+V+KG + F SM
Sbjct: 341 SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM 400
Query: 512 TIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVEL 571
+ +KP + HY C+VDL+ RAG L +A + MP +P+S +W +LL +C +H NVEL
Sbjct: 401 QRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVEL 460
Query: 572 AEMAAKQIIELEPE-NGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCS 625
A +AA ++ +L + Y+ L N+YA+ +W+N+ ++R +M R I KT G S
Sbjct: 461 ASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 194/450 (43%), Gaps = 90/450 (20%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K+IH+ IK G D K++ + G + YARQVFD +P P++ +N MI GY
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHL--KCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 128 RISCPKSGISMYLLMLAHNI-----KPDSFTFPFLLKGFTNDMA----------LKYGKV 172
K G+ LL+L + K D +T +LK + + L + ++
Sbjct: 112 -----KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARI 166
Query: 173 --------------LLDHAVKLG------------LDSNLFVQKAFIHLFSLCGLVDLAH 206
L+D VK G D N+ + I + G V+ A
Sbjct: 167 IKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAE 226
Query: 207 KIFNMGDAWEVVTWNVMLSGYNRV-XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKL 265
+IFN ++V +N M+ G++R G PN T ++ ACS L
Sbjct: 227 EIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL 286
Query: 266 TDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIV 325
T G V+ + + V ++ M + LLDM+ CG ++ A+ VFD M+ ++V SWTS++
Sbjct: 287 TSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
Query: 326 SGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEF 385
G+ G PE EAL LF M+ ++P+
Sbjct: 347 DGYGKNGN-----------PE--------------------EALELFTRMKEFRIEPNYV 375
Query: 386 TMVSILTACAHLGALELGEWV-----KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARK 440
T + L+AC+H G ++ G + + Y K K+ + + ++D+ + G++ KA +
Sbjct: 376 TFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH----YACIVDLMGRAGDLNKAFE 431
Query: 441 TFKEMHQK-DKFIWTAMIVGLAINGHGEEA 469
+ M ++ D IW A++ ++G+ E A
Sbjct: 432 FARAMPERPDSDIWAALLSSCNLHGNVELA 461
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/596 (30%), Positives = 303/596 (50%), Gaps = 82/596 (13%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
+GD++ A+QVFD +P V WN MIKGY I+ D
Sbjct: 181 RNGDMEKAKQVFDAMPSRDVVSWNAMIKGY--------------------IENDGMEEAK 220
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
LL G DM+ K N+ + ++ + G V A+++F
Sbjct: 221 LLFG---DMSEK----------------NVVTWTSMVYGYCRYGDVREAYRLFCEMPERN 261
Query: 217 VVTWNVMLSGY--NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKL--------- 265
+V+W M+SG+ N + VSPN TL+ + AC L
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGE 321
Query: 266 -------------TDLAG---GNYVYQYLTEGIVEP---------NLVMENVLLDMFGAC 300
D G + V+ Y + G++ +L N++++ +
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKN 381
Query: 301 GEMDAAKGVFDNMKT-RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGY 359
G+++ A+ +F+ +K+ D +SWTS++ G+ G + A F ++ ++D V+WT MI G
Sbjct: 382 GDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGL 441
Query: 360 LRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI--NN 417
++ F EA +L +M +KP T +L++ L+ G+ + I K +
Sbjct: 442 VQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDP 501
Query: 418 DTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI 477
D + ++L+ MY KCG +E A + F +M QKD W +MI+GL+ +G ++AL +F M+
Sbjct: 502 DLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML 561
Query: 478 ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL 537
+S P+ +T++GVLSAC+H+G++ +G + F +M + I+P + HY M+DLL RAG L
Sbjct: 562 DSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKL 621
Query: 538 KEALDVILNMPVKPNSIVWGSLLGACRVH---KNVE-LAEMAAKQIIELEPENGSVYVLL 593
KEA + I +P P+ V+G+LLG C ++ K+ E +AE AA +++EL+P N +V L
Sbjct: 622 KEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVAL 681
Query: 594 CNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEI 649
CN+YA R + +E+R M +G+KKTPGCS + +NG F++GD+S ++ ++
Sbjct: 682 CNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/552 (23%), Positives = 226/552 (40%), Gaps = 122/552 (22%)
Query: 159 KGFTNDMAL----------KYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKI 208
+GF+N+ AL + + LLD + G + + + + ++ G +D A +
Sbjct: 40 RGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVL 99
Query: 209 FNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDL 268
F + +VT N ML+GY + + N V+ ++L+A L D
Sbjct: 100 FEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFRE-----MPKNVVSWTVMLTA---LCDD 151
Query: 269 AGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVIS-------- 320
+ E + E N+V N L+ G+M+ AK VFD M +RDV+S
Sbjct: 152 GRSEDAVELFDE-MPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGY 210
Query: 321 -----------------------WTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMID 357
WTS+V G+ G + A + F +MPER+ VSWTAMI
Sbjct: 211 IENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMIS 270
Query: 358 GYLRMNHFREALALFREMQ--MSHVKPDEFTMVSILTACAHLGA--LELGEWVKTYIDKN 413
G+ +REAL LF EM+ + V P+ T++S+ AC LG LGE + + N
Sbjct: 271 GFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISN 330
Query: 414 ---KINNDTFIGSALIDM-----------------------------YFKCGNVEKARKT 441
+++D + +L+ M Y K G++E+A
Sbjct: 331 GWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETL 390
Query: 442 F--------------------------------KEMHQKDKFIWTAMIVGLAINGHGEEA 469
F +++H KD WT MI GL N EA
Sbjct: 391 FERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEA 450
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG-IKPNVTHYGCMV 528
++ S+M+ + P + TY +LS+ +++G+ + P++ +V
Sbjct: 451 ASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLV 510
Query: 529 DLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGS 588
+ ++ G +++A ++ M V+ +++ W S++ H + A K++++ + S
Sbjct: 511 SMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNS 569
Query: 589 VYVLLCNIYAAC 600
V L + +AC
Sbjct: 570 VTFL--GVLSAC 579
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 224/386 (58%), Gaps = 9/386 (2%)
Query: 248 VSPNSVTLVLILSACS--KLTDLAGGNYVY-QYLTEGIVEPNLVMENVLLDMFGACGEMD 304
V P+ T + AC+ K DL ++ Q L G++ +L N L+ ++ +D
Sbjct: 111 VPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLS-DLFTLNTLIRVYSLIAPID 169
Query: 305 AAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
+A +FD RDV+++ ++ G +I AR+ FD MP RD VSW ++I GY +MNH
Sbjct: 170 SALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNH 229
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSA 424
REA+ LF EM +KPD +VS L+ACA G + G+ + Y + ++ D+F+ +
Sbjct: 230 CREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATG 289
Query: 425 LIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPD 484
L+D Y KCG ++ A + F+ K F W AMI GLA++G+GE + F M+ S I PD
Sbjct: 290 LVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPD 349
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
+T+I VL C+H+G+V++ R F M + + + HYGCM DLL RAG ++EA ++I
Sbjct: 350 GVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMI 409
Query: 545 LNMPV----KPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAAC 600
MP + + W LLG CR+H N+E+AE AA ++ L PE+G VY ++ +YA
Sbjct: 410 EQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANA 469
Query: 601 KRWENLREVRTIM-MERGIKKTPGCS 625
+RWE + +VR I+ ++ +KK G S
Sbjct: 470 ERWEEVVKVREIIDRDKKVKKNVGFS 495
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 207/483 (42%), Gaps = 91/483 (18%)
Query: 57 LLERCKSTYQLKQIHSKTIKMG-----LSSDPVFGNKVIAFCCTQESGD-----VDYARQ 106
LL+ C++ L Q H++ I G + VF N + A S V YA
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 107 VFDTIPHPSVFIWNTMIKGYSRISCPKSGIS--MYLLMLAHNIKPDSFTFPFLLKGFT-- 162
VF I +PS F +NT+I+ + P S S ++ M ++ PD TFPF+ K
Sbjct: 70 VFRFITNPSTFCFNTIIR-ICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAK 128
Query: 163 NDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNV 222
+ L K L A++ GL S+LF I ++SL +D A ++F+ +VVT+NV
Sbjct: 129 KNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNV 188
Query: 223 -------------------------------MLSGYNRVXXXXXXXXXXXXXXXXGVSPN 251
++SGY ++ G+ P+
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 252 SVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFD 311
+V +V LSAC++ D G ++ Y + + + L+D + CG +D A +F+
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 312 NMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALAL 371
+ + +W ++++G A G +L Y
Sbjct: 309 LCSDKTLFTWNAMITGLAMHGNGELTVDY------------------------------- 337
Query: 372 FREMQMSHVKPDEFTMVSILTACAHLG----ALELGEWVKTYIDKNKINNDTFIGSALID 427
FR+M S +KPD T +S+L C+H G A L + +++ D +N + + D
Sbjct: 338 FRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYD---VNREMKHYGCMAD 394
Query: 428 MYFKCGNVEKARKTFKEMHQ----KDKFI-WTAMIVGLAINGHGEEALTMFSNMIESSIT 482
+ + G +E+A + ++M + ++K + W+ ++ G I+G+ E A +N ++ +++
Sbjct: 395 LLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKA-ANRVK-ALS 452
Query: 483 PDD 485
P+D
Sbjct: 453 PED 455
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 14/283 (4%)
Query: 104 ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN 163
AR++FD++P + WN++I GY++++ + I ++ M+A +KPD+ L
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 164 DMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVM 223
+ GK + D+ + L + F+ + ++ CG +D A +IF + + TWN M
Sbjct: 262 SGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAM 321
Query: 224 LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK--LTDLAGGNYVYQYLTEG 281
++G G+ P+ VT + +L CS L D A N Q +
Sbjct: 322 ITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEA-RNLFDQMRSLY 380
Query: 282 IVEPNLVMENVLLDMFGACGEMDAAKGVFDNM-----KTRDVISWTSIVSGFANTGQIDL 336
V + + D+ G G ++ A + + M +++W+ ++ G G I++
Sbjct: 381 DVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEI 440
Query: 337 ARKYFDQM----PERDYVSWTAMIDGYLRMNHFREALALFREM 375
A K +++ PE D + M++ Y + E + + RE+
Sbjct: 441 AEKAANRVKALSPE-DGGVYKVMVEMYANAERWEEVVKV-REI 481
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/578 (28%), Positives = 287/578 (49%), Gaps = 41/578 (7%)
Query: 56 SLLERCKSTYQLK---QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
SLL+ C + Q H+ +K GL +D GN +++ G + R+VFD
Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG-MRETRRVFDGRF 124
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
W +M+ GY + +++ M++ + + FT +K + ++ G+
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
+ G + N F+ +L+ + A ++F+ +V+ W +LS +++
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 233 XXXXXXX-XXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMEN 291
G+ P+ T +L+AC L L G ++ L + N+V+E+
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
LLDM+G CG + AR+ F+ M +++ VS
Sbjct: 305 SLLDMYGKCG-------------------------------SVREARQVFNGMSKKNSVS 333
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
W+A++ GY + +A+ +FREM+ + D + ++L ACA L A+ LG+ +
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYV 389
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
+ + + SALID+Y K G ++ A + + +M ++ W AM+ LA NG GEEA++
Sbjct: 390 RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVS 449
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
F++M++ I PD I++I +L+AC H GMV++GR +F M +GIKP HY CM+DLL
Sbjct: 450 FFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLL 509
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNV-ELAEMAAKQIIELEPENGSVY 590
RAG +EA +++ + ++ +WG LLG C + + +AE AK+++ELEP+ Y
Sbjct: 510 GRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSY 569
Query: 591 VLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLME 628
VLL N+Y A R + +R +M+ RG+ KT G S ++
Sbjct: 570 VLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/567 (29%), Positives = 287/567 (50%), Gaps = 22/567 (3%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
G + AR++FD +P V W +I GY ++ + ++ + + + + T+ ++
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMV 116
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV 218
G+ L ++L + N+ I ++ G +D A ++F+ +V
Sbjct: 117 SGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL 278
+WN M+ + V V+ ++ +K + ++ +
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 279 TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLAR 338
E N++ N ++ + +D A +F M RD SW ++++GF +++ A
Sbjct: 229 PE----RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKAC 284
Query: 339 KYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM-QMSHVKPDEFTMVSILTACAHL 397
FD+MPE++ +SWT MI GY+ EAL +F +M + VKP+ T VSIL+AC+ L
Sbjct: 285 GLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDL 344
Query: 398 GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE--MHQKDKFIWTA 455
L G+ + I K+ + + SAL++MY K G + ARK F + Q+D W +
Sbjct: 345 AGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNS 404
Query: 456 MIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQH 515
MI A +GHG+EA+ M++ M + P +TY+ +L AC+HAG+VEKG +FF +
Sbjct: 405 MIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDE 464
Query: 516 GIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMA 575
+ HY C+VDL RAG LK+ + I + + +G++L AC VH V +A+
Sbjct: 465 SLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEV 524
Query: 576 AKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYE 635
K+++E ++ YVL+ NIYAA + E E+R M E+G+KK PGCS +++ +
Sbjct: 525 VKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHL 584
Query: 636 FVAGDQSHPQSKEIYAKLENMMQDLTN 662
FV GD+SHPQ + L++++ DL N
Sbjct: 585 FVVGDKSHPQ----FEALDSILSDLRN 607
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
++ G+I ARK FD +PERD V+WT +I GY+++ REA LF + + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVD---SRKN 108
Query: 384 EFTMVSILTACAHLGALELGEWV-KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
T ++++ L + E + + ++N ++ +T +ID Y + G ++KA + F
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNT-----MIDGYAQSGRIDKALELF 163
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVE 502
EM +++ W +M+ L G +EA+ +F M + +++ ++ G V+
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVD 219
Query: 503 KGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK 550
+ R+ F M + N+ + M+ ++ + EA + MP +
Sbjct: 220 EARRLFDCMP-----ERNIISWNAMITGYAQNNRIDEADQLFQVMPER 262
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 176/595 (29%), Positives = 303/595 (50%), Gaps = 37/595 (6%)
Query: 68 KQIHSKTIKMGLSSDPVF-GNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
K+IH+ +K S ++ N +IA G + A ++ + + V WN++IKGY
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAM--YTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 127 SRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNL 186
+ K + + M+A K D + ++ L G L + +K G DSNL
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX 246
V I ++S C L + F ++++W +++GY +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVY-QYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
+ + + L IL A S L + ++ L +G+++ V++N L+D++G C M
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT--VIQNELVDVYGKCRNMGY 539
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A VF+++K +DV VSWT+MI +
Sbjct: 540 ATRVFESIKGKDV-------------------------------VSWTSMISSSALNGNE 568
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
EA+ LFR M + + D ++ IL+A A L AL G + Y+ + + I A+
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
+DMY CG+++ A+ F + +K +T+MI ++G G+ A+ +F M +++PD
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
I+++ +L AC+HAG++++GR F M ++ ++P HY C+VD+L RA + EA + +
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVK 748
Query: 546 NMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
M +P + VW +LL ACR H E+ E+AA++++ELEP+N VL+ N++A RW +
Sbjct: 749 MMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWND 808
Query: 606 LREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDL 660
+ +VR M G++K PGCS +EM+G +++F A D+SHP+SKEIY KL + + L
Sbjct: 809 VEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 863
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 141/551 (25%), Positives = 236/551 (42%), Gaps = 57/551 (10%)
Query: 57 LLERC---KSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPH 113
+LE C ++ Q +Q+HS+ K S + F + F + G +D A +VFD +P
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGK-CGSLDDAEKVFDEMPD 144
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
+ F WNTMI Y P S +++Y M + +FP LLK ++ G L
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN-MGDAWEVVTWNVMLSGYNRVXX 232
VKLG S F+ A + +++ + A ++F+ + + V WN +LS Y+
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY-QYLTEGIVEPNLVMEN 291
G +PNS T+V L+AC + G ++ L L + N
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
L+ M+ CG+M A+ + M DV++W S
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNS---------------------------- 356
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
+I GY++ ++EAL F +M + K DE +M SI+ A L L G + Y+
Sbjct: 357 ---LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI 413
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
K+ +++ +G+ LIDMY KC + F MH KD WT +I G A N EAL
Sbjct: 414 KHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGC----- 526
+F ++ + + D++ +L A + SM I I ++ G
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRASS----------VLKSMLIVKEIHCHILRKGLLDTVI 523
Query: 527 ---MVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELE 583
+VD+ + ++ A V ++ K + + W S++ + ++ N A ++++E
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGNESEAVELFRRMVETG 582
Query: 584 PENGSVYVLLC 594
SV LLC
Sbjct: 583 LSADSV-ALLC 592
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 2/192 (1%)
Query: 372 FREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND-TFIGSALIDMYF 430
F+ + +S +L C A+ G + + I K + + F+ L+ MY
Sbjct: 68 FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYG 127
Query: 431 KCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIG 490
KCG+++ A K F EM + F W MI NG AL ++ NM + ++
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187
Query: 491 VLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK 550
+L AC + G + S+ ++ G +V + ++ L A + K
Sbjct: 188 LLKACAKLRDIRSGSELH-SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 551 PNSIVWGSLLGA 562
++++W S+L +
Sbjct: 247 GDAVLWNSILSS 258
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 252/461 (54%), Gaps = 12/461 (2%)
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
GK+L ++K G+ S++ V + I ++ CG V A K+F+ V TWN M+ GY
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGY-- 122
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
V N+VT + ++ K ++ +++ + + N+
Sbjct: 123 -MSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFEL--KNVKA 179
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY 349
+V+L ++ +M+ A+ F+++ ++ W+ ++SG+ G + AR F ++ RD
Sbjct: 180 WSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL 239
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTY 409
V W +I GY + + +A+ F MQ +PD T+ SIL+ACA G L++G V +
Sbjct: 240 VIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL 299
Query: 410 IDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEA 469
I+ I + F+ +ALIDMY KCG++E A F+ + + +MI LAI+G G+EA
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEA 359
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVD 529
L MFS M + PD+IT+I VL+AC H G + +G K F+ M Q +KPNV H+GC++
Sbjct: 360 LEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQD-VKPNVKHFGCLIH 418
Query: 530 LLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSV 589
LL R+G LKEA ++ M VKPN V G+LLGAC+VH + E+AE K IIE +
Sbjct: 419 LLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNS 477
Query: 590 Y-----VLLCNIYAACKRWENLREVRTIMMERGIKKTPGCS 625
Y + N+YA +RW+ +R M +RG++K+PG S
Sbjct: 478 YSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 180/412 (43%), Gaps = 69/412 (16%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K +HS++IK G+ SD + G+ +I+ + G V AR+VFD +P +V WN MI GY
Sbjct: 66 KLLHSESIKFGVCSDVMVGSSLISM--YGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 128 RISCPKSGISMYLLMLAHNIK--PDSFTFPFLLKGFTNDMALKYGKVLLDH--------- 176
+G ++ L I ++ T+ ++KG+ + ++ + L +
Sbjct: 124 -----SNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVK 178
Query: 177 --AVKLGL------------------DSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
+V LG+ + N FV + + G V A IF A +
Sbjct: 179 AWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARD 238
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
+V WN +++GY + G P++VT+ ILSAC++ L G V+
Sbjct: 239 LVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHS 298
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDL 336
+ +E N + N L+DM+ CG+++ A VF+++ R V S++S A G+
Sbjct: 299 LINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGK--- 355
Query: 337 ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAH 396
+EAL +F M+ +KPDE T +++LTAC H
Sbjct: 356 ----------------------------GKEALEMFSTMESLDLKPDEITFIAVLTACVH 387
Query: 397 LGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK 448
G L G + + + + + LI + + G +++A + KEMH K
Sbjct: 388 GGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 390 ILTACA-HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK 448
IL ACA + + LG+ + + K + +D +GS+LI MY KCG V ARK F EM ++
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 449 DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFF 508
+ W AMI G NG A +F E S+ + +T+I ++ +EK R+ F
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFE---EISVCRNTVTWIEMIKGYGKRIEIEKARELF 167
Query: 509 ASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
M + NV + M+ + +++A ++P K N+ VW ++
Sbjct: 168 ERMPFE---LKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEK-NAFVWSLMM 215
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 277 bits (708), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 172/560 (30%), Positives = 280/560 (50%), Gaps = 45/560 (8%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRI 129
IH ++ GL D +++ + G+++ A Q+F I V W+ MI Y +
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSM--YSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 130 SCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQ 189
IS++ M+ +IKP++ T +L+G A + GK + +A+K ++S L
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 190 KAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVS 249
A I +++ CG A K F + V +N + GY ++ GV
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
P+S T+V +L C+ +D A G+ VY + + + + + L++MF C + AA +
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVL 559
Query: 310 FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREAL 369
FD GF E+ VSW M++GYL EA+
Sbjct: 560 FDK-------------CGF-----------------EKSTVSWNIMMNGYLLHGQAEEAV 589
Query: 370 ALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMY 429
A FR+M++ +P+ T V+I+ A A L AL +G V + + + + T +G++L+DMY
Sbjct: 590 ATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMY 649
Query: 430 FKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYI 489
KCG +E + K F E+ K W M+ A +G A+++F +M E+ + PD ++++
Sbjct: 650 AKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFL 709
Query: 490 GVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPV 549
VLSAC HAG+VE+G++ F M +H I+ V HY CMVDLL +AG EA++++ M V
Sbjct: 710 SVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRV 769
Query: 550 KPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREV 609
K + VWG+LL + R+H N+ L+ A Q+++LEP N S Y + L EV
Sbjct: 770 KTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY----------SQDRRLGEV 819
Query: 610 RTIMMERGIKKTPGCSLMEM 629
+ IKK P CS +E+
Sbjct: 820 NNV---SRIKKVPACSWIEV 836
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 224/500 (44%), Gaps = 51/500 (10%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVI-AFCCTQESGDVDYARQVFDTIPHPS 115
+L CK+ L Q+H I GL N++I A+ Q D +R +FD++ P
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQ---DLSRVIFDSVRDPG 63
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHN-IKPDSFTFPFLLKGFTNDMALKYGKVLL 174
V +WN+MI+GY+R + + + M I PD ++F F LK M K G +
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIH 123
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDL--AHKIFNMGDAWEVVTWNVMLSGYNRVXX 232
D ++GL+S++++ A + ++ C DL A ++F+ +VVTWN M+SG +
Sbjct: 124 DLIAEMGLESDVYIGTALVEMY--CKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGC 181
Query: 233 XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV--ME 290
V + V+L ++ A SKL + V + L +++ +
Sbjct: 182 SSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK----SDVCRCLHGLVIKKGFIFAFS 237
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV 350
+ L+DM+ C ++ AA+ VF+ + +D SW ++++ +A+ G
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNG------------------ 279
Query: 351 SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYI 410
F E L LF M+ V+ ++ S L A A++G L G + Y
Sbjct: 280 -------------FFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 411 DKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEAL 470
+ + D + ++L+ MY KCG +E A + F + +D W+AMI G +EA+
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAI 386
Query: 471 TMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDL 530
++F +M+ I P+ +T VL C G+ I+ I+ + ++ +
Sbjct: 387 SLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHC-YAIKADIESELETATAVISM 445
Query: 531 LSRAGHLKEALDVILNMPVK 550
++ G AL +P+K
Sbjct: 446 YAKCGRFSPALKAFERLPIK 465
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 182/413 (44%), Gaps = 43/413 (10%)
Query: 53 TPISLLERCK---STYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
T S+L+ C ++ K IH IK + S+ VI+ + G A + F+
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISM--YAKCGRFSPALKAFE 460
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLK--GFTNDMAL 167
+P +N + +GY++I +Y M H + PDS T +L+ F +D A
Sbjct: 461 RLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYA- 519
Query: 168 KYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM-GDAWEVVTWNVMLSG 226
G + +K G DS V A I++F+ C + A +F+ G V+WN+M++G
Sbjct: 520 -RGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNG 578
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN 286
Y PN+VT V I+ A ++L+ L G V+ L +
Sbjct: 579 YLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQ 638
Query: 287 LVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
+ N L+DM+ CG +++++ F + + ++SW +++S +A G
Sbjct: 639 TPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASC---------- 688
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
A++LF MQ + +KPD + +S+L+AC H G +E G+ +
Sbjct: 689 ---------------------AVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Query: 407 -KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKF-IWTAMI 457
+ +++KI + + ++D+ K G +A + + M K +W A++
Sbjct: 728 FEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 32/263 (12%)
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM-QMSHVKP 382
+++ ++ + DL+R FD + + V W +MI GY R REAL F M + + P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
D+++ L ACA + G + I + + +D +IG+AL++MY K ++ AR+ F
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVF 158
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSA-------- 494
+MH KD W M+ GLA NG AL +F +M + D ++ ++ A
Sbjct: 159 DKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSD 218
Query: 495 ---CTHAGMVEKGRKF----------------FASMTIQHGI-KPNVTHYGCMVDLLSRA 534
C H +++KG F +A+ ++ + + + + +G M+ +
Sbjct: 219 VCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHN 278
Query: 535 GHLKEAL---DVILNMPVKPNSI 554
G +E L D++ N V+ N +
Sbjct: 279 GFFEEVLELFDLMRNYDVRMNKV 301
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 212/327 (64%), Gaps = 12/327 (3%)
Query: 322 TSIVSGFANTGQIDLARKYFDQMPER-DYVSWTAMIDGYLRMNHFREALALFREMQMSHV 380
TS+V +++ G +D AR+ FD+ PE+ + V WTAMI Y + EA+ LF+ M+ +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 381 KPDEFTMVSILTACAHLGALELGE--WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKA 438
+ D + L+ACA LGA+++GE + ++ K ++ D + ++L++MY K G EKA
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 439 RKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM--IESS----ITPDDITYIGVL 492
RK F E +KD +T+MI G A+NG +E+L +F M I+ S ITP+D+T+IGVL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 493 SACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPN 552
AC+H+G+VE+G++ F SM + + +KP H+GCMVDL R+GHLK+A + I MP+KPN
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 553 SIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTI 612
+++W +LLGAC +H NVEL E ++I EL+ ++ YV L NIYA+ W+ ++R
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 613 MMERGIKKTPGCSLMEMNGIIYEFVAG 639
+ +R + PG S +E+ II EFV+G
Sbjct: 404 VRKR---RMPGKSWIELGSIINEFVSG 427
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 148/329 (44%), Gaps = 36/329 (10%)
Query: 150 DSFTFPFLLKGFTNDMALKY-GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKI 208
DSF+ F +K + A G+ + KLG ++ + +Q + + +S G VD A ++
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 209 FN-MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTD 267
F+ + +V W M+S Y + + V + + LSAC+ L
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGA 182
Query: 268 LAGGNYVYQY--LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIV 325
+ G +Y + + +L + N LL+M+ GE + A+ +FD +DV ++TS++
Sbjct: 183 VQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMI 242
Query: 326 SGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEF 385
G+A GQ + + F +M D + Q + + P++
Sbjct: 243 FGYALNGQAQESLELFKKMKTID-------------------------QSQDTVITPNDV 277
Query: 386 TMVSILTACAHLGALELGE--WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK 443
T + +L AC+H G +E G+ + +D N + G ++D++ + G+++ A +
Sbjct: 278 TFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFG-CMVDLFCRSGHLKDAHEFIN 336
Query: 444 EMHQK-DKFIWTAMIVGLAINGH---GEE 468
+M K + IW ++ +++G+ GEE
Sbjct: 337 QMPIKPNTVIWRTLLGACSLHGNVELGEE 365
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 132/303 (43%), Gaps = 19/303 (6%)
Query: 63 STYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP-SVFIWNT 121
S+ +QIH+ K+G ++ ++ F + GDVDYARQVFD P ++ +W
Sbjct: 80 SSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSS--VGDVDYARQVFDETPEKQNIVLWTA 137
Query: 122 MIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLG 181
MI Y+ I ++ M A I+ D L + A++ G+ + ++K
Sbjct: 138 MISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRK 197
Query: 182 --LDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY------NRVXXX 233
L +L ++ + ++++ G + A K+F+ +V T+ M+ GY
Sbjct: 198 RRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLEL 257
Query: 234 XXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ-YLTEGIVEPNLVMENV 292
++PN VT + +L ACS + G ++ + + ++P
Sbjct: 258 FKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGC 317
Query: 293 LLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTGQIDLA----RKYFDQMPER 347
++D+F G + A + M + + + W +++ + G ++L R+ F+ +R
Sbjct: 318 MVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFE--LDR 375
Query: 348 DYV 350
D+V
Sbjct: 376 DHV 378
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 217/346 (62%), Gaps = 6/346 (1%)
Query: 305 AAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
A KG F DV +S+V + ++G+++ A K F++MPER+ VSWTAMI G+ +
Sbjct: 146 ALKGGF----ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWR 201
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSA 424
L L+ +M+ S P+++T ++L+AC GAL G V + + I ++
Sbjct: 202 VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 425 LIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSIT-P 483
LI MY KCG+++ A + F + KD W +MI G A +G +A+ +F M+ S T P
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 484 DDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV 543
D ITY+GVLS+C HAG+V++GRKFF M +HG+KP + HY C+VDLL R G L+EAL++
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALEL 380
Query: 544 ILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRW 603
I NMP+KPNS++WGSLL +CRVH +V AA++ + LEP+ + +V L N+YA+ W
Sbjct: 381 IENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYW 440
Query: 604 ENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEI 649
+ VR +M ++G+K PGCS +E+N ++ F A D S+ + EI
Sbjct: 441 KEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEI 486
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 4/258 (1%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRI 129
H +K G SD G+ ++ ++SG+V+ A +VF+ +P +V W MI G+++
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVL--YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQE 199
Query: 130 SCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQ 189
+ +Y M P+ +TF LL T AL G+ + + +GL S L +
Sbjct: 200 WRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHIS 259
Query: 190 KAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY-NRVXXXXXXXXXXXXXXXXGV 248
+ I ++ CG + A +IF+ +VV+WN M++GY G
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 249 SPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKG 308
P+++T + +LS+C + G + + E ++P L + L+D+ G G + A
Sbjct: 320 KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALE 379
Query: 309 VFDNMKTR-DVISWTSIV 325
+ +NM + + + W S++
Sbjct: 380 LIENMPMKPNSVIWGSLL 397
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 33/290 (11%)
Query: 177 AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXX 236
A+K G S++++ + + L+ G V+ A+K+F VV+W M+SG+ +
Sbjct: 146 ALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDIC 205
Query: 237 XXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY-QYLTEGIVEPNLVMENVLLD 295
PN T +LSAC+ L G V+ Q L G+ + L + N L+
Sbjct: 206 LKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGL-KSYLHISNSLIS 264
Query: 296 MFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAM 355
M+ CG++ A +FD +DV+SW S+++G+A G A + F+ M
Sbjct: 265 MYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM----------- 313
Query: 356 IDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
M S KPD T + +L++C H G ++ G + ++ +
Sbjct: 314 -------------------MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGL 354
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-DKFIWTAMIVGLAING 464
+ S L+D+ + G +++A + + M K + IW +++ ++G
Sbjct: 355 KPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 12/243 (4%)
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
D + + S + +C G K +D ++GS+L+ +Y G VE A K F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVE 502
+EM +++ WTAMI G A + L ++S M +S+ P+D T+ +LSACT +G +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 503 KGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
+GR T+ G+K + ++ + + G LK+A + K + + W S++
Sbjct: 239 QGRSVHC-QTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK-DVVSWNSMIAG 296
Query: 563 CRVHKNVELAEMAAKQIIEL-EPENGSV--YVLLCNIYAACKRWENLREVR---TIMMER 616
H M A ++ EL P++G+ + + ++C+ ++E R +M E
Sbjct: 297 YAQHG----LAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEH 352
Query: 617 GIK 619
G+K
Sbjct: 353 GLK 355
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 9/194 (4%)
Query: 36 ITAKCYSSHCDPHCFGETPISLLERCKSTYQLKQ---IHSKTIKMGLSSDPVFGNKVIAF 92
+ +K S DP+ + T +LL C + L Q +H +T+ MGL S N +I+
Sbjct: 208 LYSKMRKSTSDPNDY--TFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISM 265
Query: 93 CCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN-IKPDS 151
C + GD+ A ++FD + V WN+MI GY++ I ++ LM+ + KPD+
Sbjct: 266 YC--KCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDA 323
Query: 152 FTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF-N 210
T+ +L + +K G+ + + GL L + L GL+ A ++ N
Sbjct: 324 ITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIEN 383
Query: 211 MGDAWEVVTWNVML 224
M V W +L
Sbjct: 384 MPMKPNSVIWGSLL 397
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 219/396 (55%), Gaps = 3/396 (0%)
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
G P+S T V ++S K + G + + + L ++N L+ M+ CG +D A
Sbjct: 113 GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLA 172
Query: 307 KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
K +F + RD++SW SI++G G + A K FD+MP+++ +SW MI YL N+
Sbjct: 173 KKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPG 232
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
+++LFREM + + +E T+V +L AC L+ G V + + +N+ I +ALI
Sbjct: 233 VSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALI 292
Query: 427 DMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
DMY KC V AR+ F + ++K W MI+ ++G E L +F MI + PD++
Sbjct: 293 DMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEV 352
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILN 546
T++GVL C AG+V +G+ +++ M + IKPN H CM +L S AG +EA + + N
Sbjct: 353 TFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKN 412
Query: 547 MP---VKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRW 603
+P V P S W +LL + R N L E AK +IE +P N Y LL NIY+ RW
Sbjct: 413 LPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRW 472
Query: 604 ENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAG 639
E++ VR ++ ER I + PGC L+++ I++ G
Sbjct: 473 EDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 176/425 (41%), Gaps = 67/425 (15%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSV 116
L+E S L Q+H++ I G D + +++ + GD Y ++ +I +
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLK--SSSRFGDSSYTVSIYRSIGK--L 83
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDH 176
+ N + K Y S PK + Y +L PDS+TF L+ + GK+
Sbjct: 84 YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQ 143
Query: 177 AVKLGLDSNLFVQKAFIHLFSLCGLVDL-------------------------------A 205
A+K G D L VQ + +H+++ CG +DL A
Sbjct: 144 AIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAA 203
Query: 206 HKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKL 265
HK+F+ +++WN+M+S Y G N TLVL+L+AC +
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 266 TDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIV 325
L G V+ L + ++V++ L+DM+G C E+ A+ +FD++ R+ ++W ++
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI 323
Query: 326 SGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEF 385
G+ PE + AMI+G LR PDE
Sbjct: 324 LAHCLHGR-----------PEGGLELFEAMINGMLR--------------------PDEV 352
Query: 386 TMVSILTACAHLGALELGE-WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE 444
T V +L CA G + G+ + +D+ +I + + ++Y G E+A + K
Sbjct: 353 TFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKN 412
Query: 445 MHQKD 449
+ +D
Sbjct: 413 LPDED 417
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 7/276 (2%)
Query: 82 DPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLL 141
D V N +IA +GDV A ++FD +P ++ WN MI Y + P IS++
Sbjct: 183 DIVSWNSIIA--GMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFRE 240
Query: 142 MLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGL 201
M+ + + T LL LK G+ + ++ L+S++ + A I ++ C
Sbjct: 241 MVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKE 300
Query: 202 VDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSA 261
V LA +IF+ VTWNVM+ + + P+ VT V +L
Sbjct: 301 VGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCG 360
Query: 262 CSKLTDLAGGNYVYQYLTEGI-VEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDV-- 318
C++ ++ G Y + + ++PN + + +++ + G + A+ N+ DV
Sbjct: 361 CARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTP 420
Query: 319 --ISWTSIVSGFANTGQIDLARKYFDQMPERDYVSW 352
W +++S TG L + E D +++
Sbjct: 421 ESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNY 456
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 117/273 (42%), Gaps = 35/273 (12%)
Query: 355 MIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNK 414
+ YL + ++AL + ++ PD +T VS+++ ++ G+ K+
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 415 INNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEA----- 469
+ + ++L+ MY CG ++ A+K F E+ ++D W ++I G+ NG A
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 470 --------------------------LTMFSNMIESSITPDDITYIGVLSACTHAGMVEK 503
+++F M+ + ++ T + +L+AC + +++
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 504 GRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGAC 563
GR AS+ I+ + +V ++D+ + + A + ++ ++ N + W ++ A
Sbjct: 269 GRSVHASL-IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILAH 326
Query: 564 RVHKNVELAEMAAKQIIE--LEPENGSVYVLLC 594
+H E + +I L P+ + +LC
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLC 359
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 170/550 (30%), Positives = 277/550 (50%), Gaps = 39/550 (7%)
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG 160
++ AR++FD +P F WNTMI GY++ I LL+ + ++ ++ ++ G
Sbjct: 121 LEEARKLFDEMPSRDSFSWNTMISGYAK----NRRIGEALLLFEKMPERNAVSWSAMITG 176
Query: 161 FTNDMALKYGKVLLDH----------AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN 210
F + + VL A+ GL N + +A L LV +
Sbjct: 177 FCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL-- 234
Query: 211 MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXX-----------XXXXGVSPNSVTLVLIL 259
V +N ++ GY + N V+ ++
Sbjct: 235 ------VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMI 288
Query: 260 SACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVI 319
A K+ D+ ++ + + + + N ++D + M+ A +F M RD
Sbjct: 289 KAYLKVGDVVSARLLFDQMKD----RDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH 344
Query: 320 SWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSH 379
SW +VSG+A+ G ++LAR YF++ PE+ VSW ++I Y + ++EA+ LF M +
Sbjct: 345 SWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG 404
Query: 380 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKAR 439
KPD T+ S+L+A L L LG + + K I D + +ALI MY +CG + ++R
Sbjct: 405 EKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESR 463
Query: 440 KTFKEMHQKDKFI-WTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHA 498
+ F EM K + I W AMI G A +G+ EAL +F +M + I P IT++ VL+AC HA
Sbjct: 464 RIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHA 523
Query: 499 GMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGS 558
G+V++ + F SM + I+P + HY +V++ S G +EA+ +I +MP +P+ VWG+
Sbjct: 524 GLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGA 583
Query: 559 LLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGI 618
LL ACR++ NV LA +AA+ + LEPE+ + YVLL N+YA W+ +VR M + I
Sbjct: 584 LLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRI 643
Query: 619 KKTPGCSLME 628
KK G S ++
Sbjct: 644 KKERGSSWVD 653
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 182/475 (38%), Gaps = 109/475 (22%)
Query: 200 GLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLIL 259
G + A IF +A VTWN M+SGY + +
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRRE--------------------------M 87
Query: 260 SACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGE---MDAAKGVFDNMKTR 316
+ KL D+ + + ++V N ++ + +CG ++ A+ +FD M +R
Sbjct: 88 NQARKLFDV-------------MPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR 134
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQ 376
D SW +++SG+A +I A F++MPER+ VSW+AMI G+ + A+ LFR+M
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 377 MSHVKPDEFTMVSILTACAHL--GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGN 434
+ P +V+ L L A LG++ + + + + LI Y + G
Sbjct: 195 VKDSSP-LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL---VYAYNTLIVGYGQRGQ 250
Query: 435 VEKA----------------------------------------------RKTFKEMHQK 448
VE A R F +M +
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Query: 449 DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFF 508
D W MI G E+A +FS M D ++ ++S G VE R +F
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYF 366
Query: 509 ASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPV---KPNSIVWGSLLGACRV 565
+H + N ++ + KEA+D+ + M + KP+ SLL A
Sbjct: 367 EKTPEKHTVSWN-----SIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTG 421
Query: 566 HKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKK 620
N+ L + +++ + V+ L +Y+ C + E R I E +K+
Sbjct: 422 LVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGE---IMESRRIFDEMKLKR 473
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 9/293 (3%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
G+V+ AR F+ P WN++I Y + K + +++ M KPD T LL
Sbjct: 357 GNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL 416
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN-MGDAWEV 217
T + L+ G + VK + ++ V A I ++S CG + + +IF+ M EV
Sbjct: 417 SASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREV 475
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK--LTDLAGGNYVY 275
+TWN M+ GY G+ P+ +T V +L+AC+ L D A +V
Sbjct: 476 ITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFV- 534
Query: 276 QYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSG---FANT 331
++ +EP + + L+++ G+ + A + +M D W +++ + N
Sbjct: 535 SMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNV 594
Query: 332 GQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
G +A + ++ + + + Y M + EA + M+ +K +
Sbjct: 595 GLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKER 647
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 42/196 (21%)
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV 350
N L+ G + A+ +F+ ++ R+ ++W +++SG+ +++ ARK FD MP+RD V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 351 SWTAMIDGYLRMNHFR---EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
+W MI GY+ R EA LF EM
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMP------------------------------- 132
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGE 467
+ D+F + +I Y K + +A F++M +++ W+AMI G NG +
Sbjct: 133 --------SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVD 184
Query: 468 EALTMFSNMIESSITP 483
A+ +F M +P
Sbjct: 185 SAVVLFRKMPVKDSSP 200
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 297/597 (49%), Gaps = 53/597 (8%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
Q+ S +K GL SD V GN I SG AR+VFD + + WN+++ G S+
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITM--YSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 129 ISCPK-SGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ ++ M+ ++ D +F ++ ++ LK + + +K G +S L
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLE 312
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
V + +S CG+++ +F+ VV+W M+S G
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDG 367
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
V PN VT V +++A + + EG L + G C
Sbjct: 368 VYPNEVTFVGLINAVK----------CNEQIKEG------------LKIHGLC------- 398
Query: 308 GVFDNMKTRDVIS---WTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
+KT V S ++ +A ++ A+K F+ + R+ +SW AMI G+ +
Sbjct: 399 -----IKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGF 453
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLG--ALELGEWVKTYIDKNKINNDTFIG 422
EAL +F + P+E+T S+L A A +++ G+ ++ K +N+ +
Sbjct: 454 SHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS 512
Query: 423 SALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSIT 482
SAL+DMY K GN++++ K F EM QK++F+WT++I + +G E + +F MI+ ++
Sbjct: 513 SALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVA 572
Query: 483 PDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALD 542
PD +T++ VL+AC GMV+KG + F M + ++P+ HY CMVD+L RAG LKEA +
Sbjct: 573 PDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEE 632
Query: 543 VILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKR 602
++ +P P + S+LG+CR+H NV++ A+ +E++PE YV + NIYA +
Sbjct: 633 LMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEE 692
Query: 603 WENLREVRTIMMERGIKKTPGCSLMEMNG-----IIYEFVAGDQSHPQSKEIYAKLE 654
W+ E+R M ++ + K G S +++ + F +GD+SHP+S EIY +E
Sbjct: 693 WDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVE 749
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 140/587 (23%), Positives = 259/587 (44%), Gaps = 59/587 (10%)
Query: 27 KRLITNAPAITAKCYSSHCDPHCFG----ETPISL-LERCKSTYQLK-QIHSKTIKMGLS 80
+ L N+PA + + FG E + L L+ C+ + QIH + G +
Sbjct: 49 ESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDLKRGCQIHGFSTTSGFT 108
Query: 81 SDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYL 140
S N V+ +++G D A +F+ + P V WNT++ G+ + ++ +
Sbjct: 109 SFVCVSNAVMGM--YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD---NQIALNFVV 163
Query: 141 LMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCG 200
M + + D+FT+ L G L VK GL+S+L V +FI ++S G
Sbjct: 164 RMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSG 223
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXX-XXXXXXGVSPNSVTLVLIL 259
A ++F+ ++++WN +LSG ++ GV + V+ ++
Sbjct: 224 SFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVI 283
Query: 260 SACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVI 319
+ C TDL ++ + E L + N+L+ + CG ++A K VF M R+V+
Sbjct: 284 TTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVV 343
Query: 320 SWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSH 379
SWT+++S +D +A+++F M+
Sbjct: 344 SWTTMIS------------------SNKD------------------DAVSIFLNMRFDG 367
Query: 380 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKAR 439
V P+E T V ++ A ++ G + K ++ +G++ I +Y K +E A+
Sbjct: 368 VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAK 427
Query: 440 KTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAG 499
K F+++ ++ W AMI G A NG EAL MF + ++ P++ T+ VL+A A
Sbjct: 428 KAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAE 486
Query: 500 --MVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWG 557
V++G++ A + ++ G+ ++D+ ++ G++ E+ V M K N VW
Sbjct: 487 DISVKQGQRCHAHL-LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK-NQFVWT 544
Query: 558 SLLGACRVHKNVE-LAEMAAKQIIE-LEPENGSVYVLLCNIYAACKR 602
S++ A H + E + + K I E + P+ V ++ AC R
Sbjct: 545 SIISAYSSHGDFETVMNLFHKMIKENVAPD----LVTFLSVLTACNR 587
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/603 (27%), Positives = 301/603 (49%), Gaps = 47/603 (7%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
+ H +K GL + GN +++ + VDY +VF+++ P+ + +I G +R
Sbjct: 159 RCHGVAVKTGLDKNIFVGNALLSMY-AKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLAR 217
Query: 129 ISCPKSGISMYLLMLAHNIKPDSFTFPFLL-----KGFTNDMALKYGKVLLDH----AVK 179
+ + M+ LM ++ DS +L + + ++ YG L A++
Sbjct: 218 ENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALR 277
Query: 180 LGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXX 239
LG +L + + + +++ ++ A IF VV+WN+M+ G+ +
Sbjct: 278 LGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEF 337
Query: 240 XXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYV---------------------YQYL 278
G PN VT + +L AC + D+ G + Y++
Sbjct: 338 LTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHY 397
Query: 279 TEGI----------VEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSG- 327
E I ++P+ +V+L ++ K + + ++ + IVSG
Sbjct: 398 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 457
Query: 328 ---FANTGQIDLARKYFDQ-MPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVK-P 382
++ +++++ FD + E D W +MI G+ +AL LFR M + V P
Sbjct: 458 IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCP 517
Query: 383 DEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
+E + ++L++C+ L +L G + K+ +D+F+ +AL DMY KCG ++ AR+ F
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 577
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVE 502
+ +K+ IW MI G NG G+EA+ ++ MI S PD IT++ VL+AC+H+G+VE
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVE 637
Query: 503 KGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
G + +SM HGI+P + HY C+VD L RAG L++A + P K +S++W LL +
Sbjct: 638 TGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS 697
Query: 563 CRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTP 622
CRVH +V LA A++++ L+P++ + YVLL N Y++ ++W++ ++ +M + + KTP
Sbjct: 698 CRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTP 757
Query: 623 GCS 625
G S
Sbjct: 758 GQS 760
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 149/621 (23%), Positives = 268/621 (43%), Gaps = 88/621 (14%)
Query: 59 ERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYAR------------- 105
ERCK + K IH ++MG+ SD N+++ E GD DYAR
Sbjct: 19 ERCKLSG--KVIHGFIVRMGMKSDTYLCNRLLDL--YIECGDGDYARKVFDEMSVRDVYS 74
Query: 106 ------------------QVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNI 147
+VFD +P V WN MI R + + +Y M+
Sbjct: 75 WNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGF 134
Query: 148 KPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCG-LVDLAH 206
P FT +L + + +G AVK GLD N+FV A + +++ CG +VD
Sbjct: 135 LPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGV 194
Query: 207 KIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS------ 260
++F V++ ++ G R GV +SV L ILS
Sbjct: 195 RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPRE 254
Query: 261 ACSKLTDLAG---GNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD 317
C L+++ G G ++ +L + N LL+++ +M+ A+ +F M +
Sbjct: 255 GCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVN 314
Query: 318 VISWTSIVSGFAN-----------------------------------TGQIDLARKYFD 342
V+SW ++ GF +G ++ R+ F
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFS 374
Query: 343 QMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALEL 402
+P+ +W AM+ GY H+ EA++ FR+MQ ++KPD+ T+ IL++CA L LE
Sbjct: 375 SIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEG 434
Query: 403 GEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE-MHQKDKFIWTAMIVGLA 461
G+ + + + +I+ ++ I S LI +Y +C +E + F + +++ D W +MI G
Sbjct: 435 GKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFR 494
Query: 462 INGHGEEALTMFSNMIESSI-TPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN 520
N +AL +F M ++++ P++ ++ VLS+C+ + GR+F + ++ G +
Sbjct: 495 HNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHG-LVVKSGYVSD 553
Query: 521 VTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL-GACRVHKNVELAEMAAKQI 579
+ D+ + G + A + ++ N+++W ++ G + E + K I
Sbjct: 554 SFVETALTDMYCKCGEIDSARQ-FFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 612
Query: 580 IELEPENGSVYVLLCNIYAAC 600
E +G +V ++ AC
Sbjct: 613 SSGEKPDGITFV---SVLTAC 630
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 179/666 (26%), Positives = 310/666 (46%), Gaps = 80/666 (12%)
Query: 71 HSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRIS 130
H ++IK G + V N+++ +SG + AR VFD + +V+ WN +I Y + +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNL--YSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFN 68
Query: 131 CPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN-------------DMALK--------- 168
K ++ + N + D T+ LL GF +M K
Sbjct: 69 NVKEARELFE---SDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDD 125
Query: 169 -----------------YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN- 210
YG+ L VK G D F + IH++S CG IFN
Sbjct: 126 FTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNG 185
Query: 211 --------------------MGDA-------W------EVVTWNVMLSGYNRVXXXXXXX 237
GD W + ++WN +++GY +
Sbjct: 186 SCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEAL 245
Query: 238 XXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMF 297
G+ + + +L+ S L L G V+ + + N + + ++D++
Sbjct: 246 KMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVY 305
Query: 298 GACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMID 357
CG M A+ ++ S +S++ G+++ G++ A++ FD + E++ V WTAM
Sbjct: 306 CKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFL 365
Query: 358 GYLRMNHFREALALFREMQMSHVK-PDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN 416
GYL + L L R + PD MVS+L AC+ +E G+ + + + I
Sbjct: 366 GYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGIL 425
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM 476
D + +A +DMY KCGNVE A + F ++D ++ AMI G A +GH ++ F +M
Sbjct: 426 MDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM 485
Query: 477 IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
E PD+IT++ +LSAC H G+V +G K+F SM + I P HY CM+DL +A
Sbjct: 486 TEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYR 545
Query: 537 LKEALDVILNM-PVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCN 595
L +A++++ + V+ ++++ G+ L AC +KN EL + ++++ +E NGS Y+ + N
Sbjct: 546 LDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIAN 605
Query: 596 IYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLEN 655
YA+ RW+ ++ +R M + ++ GCS ++ + F + D SH +++ IYA L
Sbjct: 606 AYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHF 665
Query: 656 MMQDLT 661
+ +DL+
Sbjct: 666 VTKDLS 671
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 197/341 (57%)
Query: 328 FANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTM 387
+A +G + A F + RD + W AMI GY++ +E L ++ +M+ + + PD++T
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 388 VSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ 447
S+ AC+ L LE G+ + K I ++ + SAL+DMYFKC + + F ++
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 448 KDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKF 507
++ WT++I G +G E L F M E P+ +T++ VL+AC H G+V+KG +
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 508 FASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHK 567
F SM +GI+P HY MVD L RAG L+EA + ++ P K + VWGSLLGACR+H
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Query: 568 NVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLM 627
NV+L E+AA + +EL+P NG YV+ N YA+C E +VR M G+KK PG S +
Sbjct: 393 NVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQI 452
Query: 628 EMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPD 668
E+ G ++ F+ D SH S++IY K+ M + Y PD
Sbjct: 453 ELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 146/341 (42%), Gaps = 12/341 (3%)
Query: 52 ETPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVF 108
ET LL+ CK + K+IH++ +G + + K++ SGD+ A +F
Sbjct: 109 ETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYAL--SGDLQTAGILF 166
Query: 109 DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALK 168
++ + WN MI GY + + G+ +Y M + I PD +TF + + + L+
Sbjct: 167 RSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLE 226
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
+GK +K + SN+ V A + ++ C H++F+ V+TW ++SGY
Sbjct: 227 HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK--LTDLAGGNYVYQYLTEGIVEPN 286
G PN VT +++L+AC+ L D G + Y + +EP
Sbjct: 287 YHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVD-KGWEHFYSMKRDYGIEPE 345
Query: 287 LVMENVLLDMFGACGEM-DAAKGVFDNMKTRDVISWTSIVSG---FANTGQIDLARKYFD 342
++D G G + +A + V + W S++ N ++LA F
Sbjct: 346 GQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFL 405
Query: 343 QMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
++ + ++ +GY A + R+M+ + VK D
Sbjct: 406 ELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 446
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 140/328 (42%), Gaps = 35/328 (10%)
Query: 141 LMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCG 200
L+ + ++ + T+ LL+ GK + +G N +++ + L++L G
Sbjct: 98 LLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSG 157
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS 260
+ A +F +++ WN M+SGY + + P+ T +
Sbjct: 158 DLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFR 217
Query: 261 ACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVIS 320
ACS L L G + + + ++ N+++++ L+DM+ C VFD + TR+VI+
Sbjct: 218 ACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVIT 277
Query: 321 WTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHV 380
WTS++SG+ G++ E L F +M+
Sbjct: 278 WTSLISGYGYHGKVS-------------------------------EVLKCFEKMKEEGC 306
Query: 381 KPDEFTMVSILTACAHLGALELGEWVKTYIDKNK--INNDTFIGSALIDMYFKCGNVEKA 438
+P+ T + +LTAC H G ++ G W Y K I + +A++D + G +++A
Sbjct: 307 RPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
Query: 439 RK-TFKEMHQKDKFIWTAMIVGLAINGH 465
+ K ++ +W +++ I+G+
Sbjct: 366 YEFVMKSPCKEHPPVWGSLLGACRIHGN 393
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 5/214 (2%)
Query: 356 IDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
+ G +EA+ L + V+P+ + + +L C G+ + +
Sbjct: 83 LKGLCVTGRLKEAVGLLWSSGL-QVEPETYAV--LLQECKQRKEYTKGKRIHAQMFVVGF 139
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSN 475
+ ++ L+ +Y G+++ A F+ + +D W AMI G G +E L ++ +
Sbjct: 140 ALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYD 199
Query: 476 MIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAG 535
M ++ I PD T+ V AC+ +E G++ A M I+ IK N+ +VD+ +
Sbjct: 200 MRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVM-IKRCIKSNIIVDSALVDMYFKCS 258
Query: 536 HLKEALDVILNMPVKPNSIVWGSLLGACRVHKNV 569
+ V + + N I W SL+ H V
Sbjct: 259 SFSDGHRVFDQLSTR-NVITWTSLISGYGYHGKV 291
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 196/314 (62%), Gaps = 6/314 (1%)
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYL---RMNHFREALALFR 373
D ++V +AN G++ AR F+++ E D +W ++ Y ++ E L LF
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFM 208
Query: 374 EMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCG 433
MQ V+P+E ++V+++ +CA+LG G W Y+ KN + + F+G++LID+Y KCG
Sbjct: 209 RMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCG 265
Query: 434 NVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLS 493
+ ARK F EM Q+D + AMI GLA++G G+E + ++ ++I + PD T++ +S
Sbjct: 266 CLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTIS 325
Query: 494 ACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNS 553
AC+H+G+V++G + F SM +GI+P V HYGC+VDLL R+G L+EA + I MPVKPN+
Sbjct: 326 ACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNA 385
Query: 554 IVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIM 613
+W S LG+ + H + E E+A K ++ LE EN YVLL NIYA RW ++ + R +M
Sbjct: 386 TLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELM 445
Query: 614 MERGIKKTPGCSLM 627
+ + K+PG S +
Sbjct: 446 KDHRVNKSPGISTL 459
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 198/436 (45%), Gaps = 60/436 (13%)
Query: 55 ISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHP 114
++L+ +CKS LKQIH++ I +GLS +K++ T + YA + IP+P
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTV---CLSYALSILRQIPNP 69
Query: 115 SVFIWNTMIKGYSRISCPKS-----GISMYLLMLAHN---IKPDSFTFPFLLKGFTNDMA 166
SVF++NT+I S +S S S+Y +L+ ++P+ FT+P L K D
Sbjct: 70 SVFLYNTLIS--SIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQ 127
Query: 167 L-KYGKVLLDHAVKL--GLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVM 223
++G+ L H +K ++ + FVQ A + ++ CG + A +F ++ TWN +
Sbjct: 128 WHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTL 187
Query: 224 LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIV 283
L+ Y V PN ++LV ++ +C+ L + G + + Y+ + +
Sbjct: 188 LAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNL 247
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQ 343
N + L+D++ CG + A+ VFD M RDV + +++ G A G F Q
Sbjct: 248 TLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHG--------FGQ 299
Query: 344 MPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG 403
E + L++ + + PD T V ++AC+H G ++ G
Sbjct: 300 -----------------------EGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
Query: 404 EWV-----KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-DKFIWTAMI 457
+ Y + K+ + L+D+ + G +E+A + K+M K + +W + +
Sbjct: 337 LQIFNSMKAVYGIEPKVEHY----GCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFL 392
Query: 458 VGLAING---HGEEAL 470
+G GE AL
Sbjct: 393 GSSQTHGDFERGEIAL 408
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 121/286 (42%), Gaps = 23/286 (8%)
Query: 282 IVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGF---ANTGQIDLAR 338
+ P+ + L++ C + K + + T + T +S ++T + A
Sbjct: 1 MTSPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYAL 60
Query: 339 KYFDQMPERDYVSWTAMIDGYLRMNHFRE---ALALFREMQMSH---VKPDEFTMVSILT 392
Q+P + +I + ++ + A +L+ ++ S V+P+EFT S+
Sbjct: 61 SILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFK 120
Query: 393 ACA-----HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ 447
A H L V +++ +N+D F+ +AL+ Y CG + +AR F+ + +
Sbjct: 121 ASGFDAQWHRHGRALHAHVLKFLEP--VNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 448 KDKFIWTAMIVGLAINGH---GEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG 504
D W ++ A + EE L +F M + P++++ + ++ +C + G +G
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRG 235
Query: 505 RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK 550
+ +++ + N ++DL S+ G L A V M +
Sbjct: 236 -VWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQR 280
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 230/447 (51%), Gaps = 37/447 (8%)
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL 278
TWN++ GY+ G+ PN +T +L AC+ L G + +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 279 TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLAR 338
+ + ++ + N L+ ++G C KT D AR
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCK------------KTSD-------------------AR 168
Query: 339 KYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLG 398
K FD+M ER+ VSW +++ + F EM PDE TMV +L+AC G
Sbjct: 169 KVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--G 226
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIV 458
L LG+ V + + ++ + +G+AL+DMY K G +E AR F+ M K+ + W+AMIV
Sbjct: 227 NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIV 286
Query: 459 GLAINGHGEEALTMFSNMI-ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
GLA G EEAL +FS M+ ESS+ P+ +T++GVL AC+H G+V+ G K+F M H I
Sbjct: 287 GLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKI 346
Query: 518 KPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVE---LAEM 574
KP + HYG MVD+L RAG L EA D I MP +P+++VW +LL AC +H + + + E
Sbjct: 347 KPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEK 406
Query: 575 AAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIY 634
K++IELEP+ V++ N +A + W EVR +M E +KK G S +E+ G +
Sbjct: 407 VKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFH 466
Query: 635 EFVAGDQSHPQSKEIYAKLENMMQDLT 661
F +G + IY L+ LT
Sbjct: 467 RFFSGYDPRSEYVSIYELLDLFKFQLT 493
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 183/414 (44%), Gaps = 35/414 (8%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSV 116
L+ C S L QIH + L +D ++++ + D+ +AR + +
Sbjct: 19 FLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTP 78
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDH 176
WN + +GYS P I +Y M IKP+ TFPFLLK + + L G+ +
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 177 AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXX 236
+K G D +++V IHL+ C A K+F+ VV+WN +++
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 237 XXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDM 296
P+ T+V++LSAC +L+ G V+ + +E N + L+DM
Sbjct: 199 FECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDM 256
Query: 297 FGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMI 356
+ G ++ A+ VF+ M ++V +W++++ G A G + A + F +M
Sbjct: 257 YAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKM------------ 304
Query: 357 DGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDK-NKI 415
M+ S V+P+ T + +L AC+H G ++ G ++K +KI
Sbjct: 305 ------------------MKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKI 346
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGEE 468
A++D+ + G + +A K+M + D +W ++ +I+ H E+
Sbjct: 347 KPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH-HDED 399
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 32/278 (11%)
Query: 318 VISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQM 377
+IS VS + + AR + +W + GY + E++ ++ EM+
Sbjct: 47 IISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKR 106
Query: 378 SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
+KP++ T +L ACA L G ++ + K+ + D ++G+ LI +Y C
Sbjct: 107 RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSD 166
Query: 438 ARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSAC-- 495
ARK F EM +++ W +++ L NG F MI PD+ T + +LSAC
Sbjct: 167 ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG 226
Query: 496 -------THAGMV-------------------EKGRKFFASMTIQHGIKPNVTHYGCMVD 529
H+ ++ + G +A + + + NV + M+
Sbjct: 227 NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIV 286
Query: 530 LLSRAGHLKEALDVILNM----PVKPNSIVWGSLLGAC 563
L++ G +EAL + M V+PN + + +L AC
Sbjct: 287 GLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/585 (28%), Positives = 276/585 (47%), Gaps = 32/585 (5%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
G + A ++FD +P V N + G+ R +SG + ML D T +L
Sbjct: 104 GKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVL 162
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV 218
K++ A+ G D + V I + CG +F+ V+
Sbjct: 163 SVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVI 222
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL 278
T ++SG V PNSVT + L+ACS + G ++ L
Sbjct: 223 TLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALL 282
Query: 279 TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLAR 338
+ +E L +E+ L+DM+ CG ++ A WT
Sbjct: 283 WKYGIESELCIESALMDMYSKCGSIEDA--------------WT---------------- 312
Query: 339 KYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLG 398
F+ E D VS T ++ G + EA+ F M + V+ D + ++L
Sbjct: 313 -IFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDN 371
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIV 458
+L LG+ + + + K K + +TF+ + LI+MY KCG++ ++ F+ M +++ W +MI
Sbjct: 372 SLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIA 431
Query: 459 GLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIK 518
A +GHG AL ++ M + P D+T++ +L AC+H G+++KGR+ M HGI+
Sbjct: 432 AFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIE 491
Query: 519 PNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQ 578
P HY C++D+L RAG LKEA I ++P+KP+ +W +LLGAC H + E+ E AA+Q
Sbjct: 492 PRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQ 551
Query: 579 IIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVA 638
+ + P++ S ++L+ NIY++ +W+ + M G+ K G S +E+ + FV
Sbjct: 552 LFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVV 611
Query: 639 GDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKET 683
D+ HPQ++ IY L + + + GY PD + G++ T
Sbjct: 612 EDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFILCYTGDDRNGT 656
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 125/304 (41%), Gaps = 13/304 (4%)
Query: 53 TPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
T +S L C + ++ +QIH+ K G+ S+ + ++ + G ++ A +F+
Sbjct: 258 TYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDM--YSKCGSIEDAWTIFE 315
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+ ++ G ++ + I ++ ML ++ D+ +L D +L
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
GK L +K N FV I+++S CG + + +F V+WN M++ + R
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE--GIVEPNL 287
V P VT + +L ACS + + G + + E GI EP
Sbjct: 436 HGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI-EPRT 494
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTR-DVISWTSIVSGFANTGQIDL----ARKYFD 342
++DM G G + AK D++ + D W +++ + G ++ A + F
Sbjct: 495 EHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQ 554
Query: 343 QMPE 346
P+
Sbjct: 555 TAPD 558
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 191/306 (62%), Gaps = 2/306 (0%)
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVK 381
+ ++ + G+ + ARK FD+ PER SW A+I G EA+ +F +M+ S ++
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 382 PDEFTMVSILTACAHLGALELGEWVKTYI--DKNKINNDTFIGSALIDMYFKCGNVEKAR 439
PD+FTMVS+ +C LG L L + + K + +D + ++LIDMY KCG ++ A
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLAS 275
Query: 440 KTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAG 499
F+EM Q++ W++MIVG A NG+ EAL F M E + P+ IT++GVLSAC H G
Sbjct: 276 HIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGG 335
Query: 500 MVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSL 559
+VE+G+ +FA M + ++P ++HYGC+VDLLSR G LKEA V+ MP+KPN +VWG L
Sbjct: 336 LVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCL 395
Query: 560 LGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIK 619
+G C +VE+AE A ++ELEP N VYV+L N+YA W+++ VR +M + +
Sbjct: 396 MGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVA 455
Query: 620 KTPGCS 625
K P S
Sbjct: 456 KIPAYS 461
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 198/426 (46%), Gaps = 50/426 (11%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
GD+ + ++ D +P F+WN +++ Y R P I +YL M+ + PD ++ P ++
Sbjct: 68 GDI-FRSRILDQ--YPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV 218
K GK L AV+LG + F + FI L+ G + A K+F+ ++
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLG 184
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL 278
+WN ++ G N G+ P+ T+V + ++C L DL+ +++ +
Sbjct: 185 SWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCV 244
Query: 279 TEGIVE--PNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDL 336
+ E +++M N L+DM+G CG MD A +F+ M+ R+V+SW+S++ G+A G
Sbjct: 245 LQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNT-- 302
Query: 337 ARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAH 396
EAL FR+M+ V+P++ T V +L+AC H
Sbjct: 303 -----------------------------LEALECFRQMREFGVRPNKITFVGVLSACVH 333
Query: 397 LGALELGEWVKTYIDKNKINNDTFIG----SALIDMYFKCGNVEKARKTFKEMHQK-DKF 451
G +E G KTY K + G ++D+ + G +++A+K +EM K +
Sbjct: 334 GGLVEEG---KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVM 390
Query: 452 IWTAMIVGLAINGHGEEALTMFSNMIESSITP-DDITYIGVLSACTHAGM---VEKGRKF 507
+W ++ G G E A + M+E + P +D Y+ + + GM VE+ RK
Sbjct: 391 VWGCLMGGCEKFGDVEMAEWVAPYMVE--LEPWNDGVYVVLANVYALRGMWKDVERVRKL 448
Query: 508 FASMTI 513
+ +
Sbjct: 449 MKTKKV 454
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 8/275 (2%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
K++HS +++G D + I C ++G+ + AR+VFD P + WN +I G +
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITLYC--KAGEFENARKVFDENPERKLGSWNAIIGGLN 194
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLK--GFTNDMALKYGKVLLDHAVKLGLDSN 185
+ M++ M ++PD FT + G D++L + K S+
Sbjct: 195 HAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSD 254
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
+ + + I ++ CG +DLA IF VV+W+ M+ GY
Sbjct: 255 IMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMRE 314
Query: 246 XGVSPNSVTLVLILSAC--SKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEM 303
GV PN +T V +LSAC L + G Y +E +EP L ++D+ G++
Sbjct: 315 FGVRPNKITFVGVLSACVHGGLVE-EGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQL 373
Query: 304 DAAKGVFDNMKTR-DVISWTSIVSGFANTGQIDLA 337
AK V + M + +V+ W ++ G G +++A
Sbjct: 374 KEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 13/307 (4%)
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
W ++ Y+R +A+ ++ M S V PD +++ ++ A + LG+ + +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
+ D F S I +Y K G E ARK F E ++ W A+I GL G EA+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFAS-MTIQHGIKPNVTHYGCMVDL 530
MF +M S + PDD T + V ++C G + + + + K ++ ++D+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 531 LSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIE--LEPENGS 588
+ G + A + M + N + W S++ + N A +Q+ E + P
Sbjct: 265 YGKCGRMDLASHIFEEMRQR-NVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK-- 321
Query: 589 VYVLLCNIYAACKRWENLREVRT--IMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQS 646
+ + +AC + E +T MM+ + PG S G I + ++ D ++
Sbjct: 322 --ITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLS---HYGCIVDLLSRDGQLKEA 376
Query: 647 KEIYAKL 653
K++ ++
Sbjct: 377 KKVVEEM 383
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 291/591 (49%), Gaps = 19/591 (3%)
Query: 47 PHCFGETPISLLERCKS---TYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDY 103
P+ F P LL+ C Q + +H++ +K G D +++ + V
Sbjct: 29 PNKFTFPP--LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSM--YMKVKQVTD 84
Query: 104 ARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN 163
A +V D +P + N + G + M+ +S T +L G +
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD 144
Query: 164 DMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVM 223
++ G L A+K G + ++V + + ++S CG LA ++F VVT+N
Sbjct: 145 ---IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF 201
Query: 224 LSGY-NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI 282
+SG PN VT V ++AC+ L +L G ++ + +
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 283 VEPNLVMENVLLDMFGACGEMDAAKGVFDNMK-TRDVISWTSIVSGFANTGQIDLARKYF 341
+ ++ L+DM+ C +A VF +K TR++ISW S++SG GQ + A + F
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 342 DQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
+++ D +W ++I G+ ++ EA F M + P + S+L+AC+ +
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDI 381
Query: 398 GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK--EMHQKDKFIWTA 455
L+ G+ + ++ K D F+ ++LIDMY KCG AR+ F E KD W
Sbjct: 382 WTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNV 441
Query: 456 MIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQH 515
MI G +G E A+ +F + E + P T+ VLSAC+H G VEKG + F M ++
Sbjct: 442 MISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEY 501
Query: 516 GIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMA 575
G KP+ H GCM+DLL R+G L+EA +VI M +S+ SLLG+CR H + L E A
Sbjct: 502 GYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEA 560
Query: 576 AKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSL 626
A ++ ELEPEN + +V+L +IYAA +RWE++ +R ++ ++ + K PG SL
Sbjct: 561 AMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 166/385 (43%), Gaps = 36/385 (9%)
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
R+S +G + ++L+H+ P+ FTFP LLK + G++L VK G ++F
Sbjct: 10 RVSNLVTGGTSLDVILSHS--PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVF 67
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
A + ++ V A K+ + + + N +SG G
Sbjct: 68 TATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSG 127
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
NSVT+ +L C D+ GG ++ + E + + L+ M+ CGE A
Sbjct: 128 SGMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAA 184
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
+F+ + + V+++ + +SG G ++L F+ M
Sbjct: 185 RMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLM----------------------- 221
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
+ S +P++ T V+ +TACA L L+ G + + K + +T +G+ALID
Sbjct: 222 -------RKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALID 274
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFI-WTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
MY KC + A F E+ I W ++I G+ ING E A+ +F + + PD
Sbjct: 275 MYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSA 334
Query: 487 TYIGVLSACTHAGMVEKGRKFFASM 511
T+ ++S + G V + KFF M
Sbjct: 335 TWNSLISGFSQLGKVIEAFKFFERM 359
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 132/333 (39%), Gaps = 62/333 (18%)
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
+SH P++FT +L +CA LG + G + + K D F +AL+ MY K V
Sbjct: 25 LSH-SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVT 83
Query: 437 KARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACT 496
A K EM ++ A + GL NG +A MF + S + +T VL C
Sbjct: 84 DALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC- 142
Query: 497 HAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK------ 550
G +E G + + ++ G + V +V + SR G A + +P K
Sbjct: 143 --GDIEGGMQLHC-LAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYN 199
Query: 551 -----------------------------PNSIVWGSLLGACRVHKNV----ELAEMAAK 577
PN + + + + AC N+ +L + K
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 578 QIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFV 637
+ + E G+ L ++Y+ C+ W++ V T +K T +L+ N +I +
Sbjct: 260 KEFQFETMVGTA---LIDMYSKCRCWKSAYIVFT-----ELKDTR--NLISWNSVISGMM 309
Query: 638 AGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTS 670
Q H + E++ KL+ + G PD++
Sbjct: 310 INGQ-HETAVELFEKLD-------SEGLKPDSA 334
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 165/559 (29%), Positives = 285/559 (50%), Gaps = 34/559 (6%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+++HS K L+ DP F ++ F + D+ AR++FD P SVF+WN++I+ Y+
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALND--DLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ + +S++ +L + +PD+FT+ L +GF+ K + + A+ GL +
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
A + +S GL+ A K+F ++ WNVM+ GY G
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
PN T+V LT G+++P+L++ V + C ++
Sbjct: 203 HQPNCYTMVA--------------------LTSGLIDPSLLL--VAWSVHAFCLKI---- 236
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
N+ + + ++V+ ++ I A F+ + E D V+ +++I GY R + +E
Sbjct: 237 ----NLDSHSYVG-CALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKE 291
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
AL LF E++MS KPD + +L +CA L G+ V +Y+ + + D + SALID
Sbjct: 292 ALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALID 351
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
MY KCG ++ A F + +K+ + ++I+GL ++G A F+ ++E + PD+IT
Sbjct: 352 MYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEIT 411
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
+ +L C H+G++ KG++ F M + GI+P HY MV L+ AG L+EA + ++++
Sbjct: 412 FSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSL 471
Query: 548 PVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVY-VLLCNIYAACKRWENL 606
+S + G+LL C VH+N LAE+ A+ I + E SVY V+L N+YA RW+ +
Sbjct: 472 QKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEV 531
Query: 607 REVRTIMMERGIKKTPGCS 625
+R + E K PG S
Sbjct: 532 ERLRDGISESYGGKLPGIS 550
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/627 (27%), Positives = 283/627 (45%), Gaps = 71/627 (11%)
Query: 66 QLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
Q++Q+ + K GL D K + G V A+ +FD +P +WN +I G
Sbjct: 68 QVEQVQTHLTKSGL--DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICG 125
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
YSR ++++ML P + T LL + G+ + A K GL+ +
Sbjct: 126 YSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELD 185
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
V+ A I +S C + A +F V+WN M+ Y++
Sbjct: 186 SQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
Query: 246 XGVSPNSVTLVLILSA-------------CSKLTDLA------------GGNYVYQYLTE 280
V + VT++ +LSA C + D++ G + L
Sbjct: 246 KNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA 305
Query: 281 GIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR------DVISWTSIVSGFANTGQI 334
+ ++V ++ + G+MD A F KTR D ++ I+ G + I
Sbjct: 306 SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFS--KTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 335 DLARKY-----------------------------------FDQMPERDYVSWTAMIDGY 359
D+ F+Q+ E +SW ++I G
Sbjct: 364 DIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGC 423
Query: 360 LRMNHFREALALFREMQMSH-VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
++ A +F +M ++ + PD T+ S+L C+ L L LG+ + Y +N N+
Sbjct: 424 VQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENE 483
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
F+ +ALIDMY KCGN +A FK + W +MI G +++G AL+ + M E
Sbjct: 484 NFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMRE 543
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
+ PD+IT++GVLSAC H G V++G+ F +M + GI P + HY MV LL RA
Sbjct: 544 KGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFT 603
Query: 539 EALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYA 598
EAL +I M +KP+S VWG+LL AC +H+ +E+ E A+++ L+ +NG +YVL+ N+YA
Sbjct: 604 EALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYA 663
Query: 599 ACKRWENLREVRTIMMERGIKKTPGCS 625
W+++ VR +M + G G S
Sbjct: 664 TEAMWDDVVRVRNMMKDNGYDGYLGVS 690
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 186/433 (42%), Gaps = 43/433 (9%)
Query: 134 SGISMYLLMLAHNIKPDSFTFPFLLKGFT---NDMALKYGKVLLDHAVKLGLDSNLFVQK 190
S I+++ +L ++ P+ FT L+ T N L+ +V H K GLD ++V+
Sbjct: 31 SPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQ-THLTKSGLDRFVYVKT 89
Query: 191 AFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSP 250
+ ++L+ G V A +F+ + V WN ++ GY+R G SP
Sbjct: 90 SLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSP 149
Query: 251 NSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVF 310
++ TLV +L C + ++ G V+ + +E + ++N L+ + C E+ +A+ +F
Sbjct: 150 SATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLF 209
Query: 311 DNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALA 370
MK + +SW +++ ++ +G + EA+
Sbjct: 210 REMKDKSTVSWNTMIGAYSQSGLQE-------------------------------EAIT 238
Query: 371 LFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYF 430
+F+ M +V+ T++++L+ AH+ E + + K + ND + ++L+ Y
Sbjct: 239 VFKNMFEKNVEISPVTIINLLS--AHVSH----EPLHCLVVKCGMVNDISVVTSLVCAYS 292
Query: 431 KCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIG 490
+CG + A + + Q T+++ A G + A+ FS + + D + +G
Sbjct: 293 RCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVG 352
Query: 491 VLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK 550
+L C + ++ G I+ G+ ++ + S+ ++ L + +
Sbjct: 353 ILHGCKKSSHIDIGMSLHG-YAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQET 411
Query: 551 PNSIVWGSLLGAC 563
P I W S++ C
Sbjct: 412 P-LISWNSVISGC 423
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 176/464 (37%), Gaps = 77/464 (16%)
Query: 53 TPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
+P++++ + + +H +K G+ +D ++ C G + A +++ +
Sbjct: 251 SPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLV--CAYSRCGCLVSAERLYASAK 308
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
S+ +++ Y+ + + +K D+ +L G + G
Sbjct: 309 QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS 368
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG-YNRVX 231
L +A+K GL + V I ++S V+ +F +++WN ++SG
Sbjct: 369 LHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGR 428
Query: 232 XXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMEN 291
G+ P+++T+ +L+ CS+L L G ++ Y E +
Sbjct: 429 ASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCT 488
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
L+DM+ CG A+ VF ++K +W S++SG++ +G
Sbjct: 489 ALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG------------------- 529
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
+ H AL+ + EM+ +KPDE T + +L+AC H G ++D
Sbjct: 530 ----------LQH--RALSCYLEMREKGLKPDEITFLGVLSACNHGG----------FVD 567
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHG---EE 468
+ KI R KE A++VGL G E
Sbjct: 568 EGKIC---------------------FRAMIKEFGISPTLQHYALMVGLL--GRACLFTE 604
Query: 469 ALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG----RKFF 508
AL + M I PD + +LSAC +E G RK F
Sbjct: 605 ALYLIWKM---DIKPDSAVWGALLSACIIHRELEVGEYVARKMF 645
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 129/306 (42%), Gaps = 18/306 (5%)
Query: 55 ISLLERCKSTYQLK---QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTI 111
+ +L CK + + +H IK GL + + N +I + DV+ +F+ +
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITM--YSKFDDVETVLFLFEQL 408
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGIS------MYLLMLAHNIKPDSFTFPFLLKGFTNDM 165
+ WN++I G C +SG + + +ML + PD+ T LL G +
Sbjct: 409 QETPLISWNSVISG-----CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 463
Query: 166 ALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLS 225
L GK L + ++ ++ FV A I +++ CG A +F A TWN M+S
Sbjct: 464 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 226 GYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ-YLTEGIVE 284
GY+ G+ P+ +T + +LSAC+ + G ++ + E +
Sbjct: 524 GYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 583
Query: 285 PNLVMENVLLDMFG-ACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQ 343
P L +++ + G AC +A ++ D W +++S ++++ +
Sbjct: 584 PTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARK 643
Query: 344 MPERDY 349
M DY
Sbjct: 644 MFMLDY 649
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 173/623 (27%), Positives = 299/623 (47%), Gaps = 50/623 (8%)
Query: 53 TPISLLERCKST-YQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTI 111
T + ++ C+S + ++IH I+ G N ++ C D AR++FD +
Sbjct: 129 TLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSIL---CMYADSDSLSARKLFDEM 185
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIK--PDSFTFPFLLKGFTNDMALKY 169
V W+ +I+ Y + P G+ ++ M+ H K PD T +LK T +
Sbjct: 186 SERDVISWSVVIRSYVQSKEPVVGLKLFKEMV-HEAKTEPDCVTVTSVLKACTVMEDIDV 244
Query: 170 GKVLLDHAVKLGLD-SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
G+ + +++ G D +++FV + I ++S VD A ++F+ +V+WN +L+G+
Sbjct: 245 GRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFV 304
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
V + VT+V +L C ++ + E N V
Sbjct: 305 HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV 364
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
+ L+D + +C +D A V D M +D
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVL-------------------------------DSMTYKD 393
Query: 349 YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK- 407
VS + MI G EA+++F M+ + P+ T++S+L AC+ L +W
Sbjct: 394 VVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHG 450
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGE 467
I ++ ND +G++++D Y KCG +E AR+TF ++ +K+ WT +I AING +
Sbjct: 451 IAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPD 510
Query: 468 EALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCM 527
+AL +F M + TP+ +TY+ LSAC H G+V+KG F SM ++ KP++ HY C+
Sbjct: 511 KALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM-VEEDHKPSLQHYSCI 569
Query: 528 VDLLSRAGHLKEALDVILNMP--VKPNSIVWGSLLGACRVH-KNVELAEMAAKQIIELEP 584
VD+LSRAG + A+++I N+P VK + WG++L CR K + + +++ELEP
Sbjct: 570 VDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEP 629
Query: 585 ENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGD---Q 641
S Y+L + +AA K WE++ +R ++ ER ++ G S++ + F+AGD Q
Sbjct: 630 LCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQ 689
Query: 642 SHPQSKEIYAKLENMMQDLTNAG 664
S + ++ L M+ AG
Sbjct: 690 SDSELNDVVQSLHRCMKLDDTAG 712
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/539 (23%), Positives = 210/539 (38%), Gaps = 109/539 (20%)
Query: 119 WNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAV 178
W ++ GYS I ++G+ D F FP + K L G + D +
Sbjct: 25 WREVVSGYSEIQ--RAGVQF----------NDPFVFPIVFKACAKLSWLFQGNSIADFYM 72
Query: 179 KLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXX 238
K G LC + F+ ++ + V+WNV++ G
Sbjct: 73 KCG---------------DLCS----GLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 239 XXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFG 298
G PN+ TLVL++ AC L G ++ Y+ ++N +L M+
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYA 171
Query: 299 ACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
+ A K +FD M RDVISW+ ++ R YV + G
Sbjct: 172 DSDSLSARK-LFDEMSERDVISWSVVI---------------------RSYVQSKEPVVG 209
Query: 359 YLRMNHFREALALFREM-QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN- 416
L LF+EM + +PD T+ S+L AC + +++G V + + +
Sbjct: 210 ----------LKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDL 259
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM 476
D F+ ++LIDMY K +V+ A + F E ++ W +++ G N +EAL MF M
Sbjct: 260 ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319
Query: 477 IESSITPDDITYIGVLSAC-----------------------------------THAGMV 501
++ ++ D++T + +L C T +V
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLV 379
Query: 502 EKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLG 561
+ SMT + +V M+ L+ AG EA+ + +M PN+I SLL
Sbjct: 380 DDAGTVLDSMTYK-----DVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLN 434
Query: 562 ACRVHKNVELAEMAAKQIIE--LEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGI 618
AC V ++ ++ A I L + SV + + YA C E R + E+ I
Sbjct: 435 ACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNI 493
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 187/433 (43%), Gaps = 58/433 (13%)
Query: 41 YSSHCDPHCFGETPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVF-GNKVIAFCCTQ 96
+ + +P C T S+L+ C + + +H +I+ G VF N +I
Sbjct: 218 HEAKTEPDCV--TVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDM--YS 273
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
+ DVD A +VFD ++ WN+++ G+ + M+ LM+ ++ D T
Sbjct: 274 KGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVS 333
Query: 157 LL---KGFTNDMALK--YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM 211
LL K F + K +G + ++ G +SN + I ++ C LVD A + +
Sbjct: 334 LLRVCKFFEQPLPCKSIHGVI-----IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDS 388
Query: 212 GDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGG 271
+VV+ + M+SG +PN++T++ +L+ACS DL
Sbjct: 389 MTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTS 445
Query: 272 NYVYQY-LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFAN 330
+ + + + ++ + ++D + CG ++ A+ FD + +++ISWT I+S +A
Sbjct: 446 KWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI 505
Query: 331 TGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSI 390
G D A FD+M ++ Y P+ T ++
Sbjct: 506 NGLPDKALALFDEMKQKGYT-------------------------------PNAVTYLAA 534
Query: 391 LTACAHLGALELGEWV-KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKD 449
L+AC H G ++ G + K+ ++++ + S ++DM + G ++ A + K + +
Sbjct: 535 LSACNHGGLVKKGLMIFKSMVEEDHKPSLQHY-SCIVDMLSRAGEIDTAVELIKNLPEDV 593
Query: 450 KF---IWTAMIVG 459
K W A++ G
Sbjct: 594 KAGASAWGAILSG 606
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 160/379 (42%), Gaps = 43/379 (11%)
Query: 319 ISW----TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFRE 374
+SW SI + G + + FD M RD VSW ++ G L E L F +
Sbjct: 58 LSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK 117
Query: 375 MQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGN 434
+++ +P+ T+V ++ AC L GE + Y+ ++ + + ++++ MY +
Sbjct: 118 LRVWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDS 175
Query: 435 VEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI-ESSITPDDITYIGVLS 493
+ ARK F EM ++D W+ +I + L +F M+ E+ PD +T VL
Sbjct: 176 L-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLK 234
Query: 494 ACTHAGMVEKGRKFFASMTIQHGIK-PNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPN 552
ACT ++ GR +I+ G +V ++D+ S+ + A V + N
Sbjct: 235 ACTVMEDIDVGRSVHG-FSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-N 292
Query: 553 SIVWGSLLGAC----RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN--- 605
+ W S+L R + +E+ + ++ +E++ V + ++ CK +E
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDE------VTVVSLLRVCKFFEQPLP 346
Query: 606 LREVRTIMMERG-----------IKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLE 654
+ + +++ RG I CSL++ G + + + +
Sbjct: 347 CKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLD--------SMTYKDVVSCS 398
Query: 655 NMMQDLTNAGYSPDTSEVF 673
M+ L +AG S + +F
Sbjct: 399 TMISGLAHAGRSDEAISIF 417
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/595 (29%), Positives = 288/595 (48%), Gaps = 31/595 (5%)
Query: 56 SLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVI----AFCCTQESGDVDYARQVF 108
SLL C + +Q+H+ I GL D V K++ AF E+ + ++
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 109 DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALK 168
+P WN +I Y R + +S+Y M++ I+ D FT+P ++K +
Sbjct: 148 HPLP------WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFA 201
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
YG+V+ NL+V A I ++ G VD+A ++F+ + V+WN +++ Y
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY-LTEGIVEPNL 287
GV + VT I C L GNY+ G+ N+
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC-----LEAGNYIGALNCVVGMRNCNV 316
Query: 288 VMENV-LLDMFGACGEMDAAK--GVFDNMKTR------DVIS-WTSIVSGFANTGQIDLA 337
+ +V +++ AC + A K VF + R D+ + S+++ ++ + A
Sbjct: 317 RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHA 376
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
F Q+ +W ++I G+ E L +EM +S P+ T+ SIL A +
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 398 GALELGEWVKTYIDKNKINNDTFI-GSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAM 456
G L+ G+ YI + + D I ++L+DMY K G + A++ F M ++DK +T++
Sbjct: 437 GNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSL 496
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
I G G GE AL F +M S I PD +T + VLSAC+H+ +V +G F M G
Sbjct: 497 IDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFG 556
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAA 576
I+ + HY CMVDL RAG+L +A D+ +P +P+S + +LL AC +H N + E AA
Sbjct: 557 IRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAA 616
Query: 577 -KQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMN 630
K ++E +PE+ Y+LL ++YA W L V+T++ + G++K +LME +
Sbjct: 617 DKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETD 671
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/595 (29%), Positives = 288/595 (48%), Gaps = 31/595 (5%)
Query: 56 SLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVI----AFCCTQESGDVDYARQVF 108
SLL C + +Q+H+ I GL D V K++ AF E+ + ++
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 109 DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALK 168
+P WN +I Y R + +S+Y M++ I+ D FT+P ++K +
Sbjct: 148 HPLP------WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFA 201
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
YG+V+ NL+V A I ++ G VD+A ++F+ + V+WN +++ Y
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY-LTEGIVEPNL 287
GV + VT I C L GNY+ G+ N+
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC-----LEAGNYIGALNCVVGMRNCNV 316
Query: 288 VMENV-LLDMFGACGEMDAAK--GVFDNMKTR------DVIS-WTSIVSGFANTGQIDLA 337
+ +V +++ AC + A K VF + R D+ + S+++ ++ + A
Sbjct: 317 RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHA 376
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
F Q+ +W ++I G+ E L +EM +S P+ T+ SIL A +
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 398 GALELGEWVKTYIDKNKINNDTFI-GSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAM 456
G L+ G+ YI + + D I ++L+DMY K G + A++ F M ++DK +T++
Sbjct: 437 GNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSL 496
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
I G G GE AL F +M S I PD +T + VLSAC+H+ +V +G F M G
Sbjct: 497 IDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFG 556
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAA 576
I+ + HY CMVDL RAG+L +A D+ +P +P+S + +LL AC +H N + E AA
Sbjct: 557 IRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAA 616
Query: 577 -KQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMN 630
K ++E +PE+ Y+LL ++YA W L V+T++ + G++K +LME +
Sbjct: 617 DKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETD 671
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/538 (29%), Positives = 262/538 (48%), Gaps = 37/538 (6%)
Query: 87 NKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN 146
N +I+ C ++G +D A +F +P P+V WN +I G+ P++ + + M
Sbjct: 177 NTLISGYC--KAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRA-LEFLVRMQREG 233
Query: 147 IKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAH 206
+ D F P LK + L GK L VK GL+S+ F A I ++S CG + A
Sbjct: 234 LVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAA 293
Query: 207 KIFN---MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
+F+ + V WN MLSG+ + +S TL L C
Sbjct: 294 DVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICI 353
Query: 264 KLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTS 323
+L G V+ + E + ++ ++L+D+
Sbjct: 354 NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLH-------------------------- 387
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPD 383
AN G I A K F ++P +D ++++ +I G ++ A LFRE+ + D
Sbjct: 388 -----ANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDAD 442
Query: 384 EFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK 443
+F + +IL C+ L +L G+ + K ++ +AL+DMY KCG ++ F
Sbjct: 443 QFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFD 502
Query: 444 EMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEK 503
M ++D WT +IVG NG EEA F MI I P+ +T++G+LSAC H+G++E+
Sbjct: 503 GMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEE 562
Query: 504 GRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGAC 563
R +M ++G++P + HY C+VDLL +AG +EA ++I MP++P+ +W SLL AC
Sbjct: 563 ARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTAC 622
Query: 564 RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKT 621
HKN L + A+++++ P++ SVY L N YA W+ L +VR + G K++
Sbjct: 623 GTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKES 680
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 207/464 (44%), Gaps = 12/464 (2%)
Query: 166 ALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLS 225
A K G+ + H +K G+ N+F+ I ++ L+ AHK+F+ +VTW M+S
Sbjct: 20 AFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVS 79
Query: 226 GYNRVXX-XXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
GY + N +L AC + D+ G VY+ + + +
Sbjct: 80 GYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLR 139
Query: 285 PNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQM 344
++V+ N ++DM+ G + A F + SW +++SG+ G +D A F +M
Sbjct: 140 GDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM 199
Query: 345 PERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGE 404
P+ + VSW +I G++ R AL MQ + D F + L AC+ G L +G+
Sbjct: 200 PQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGK 258
Query: 405 WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH---QKDKFIWTAMIVGLA 461
+ + K+ + + F SALIDMY CG++ A F + +W +M+ G
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 462 INGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNV 521
IN E AL + + +S + D T G L C + + G + S+ + G + +
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH-SLVVVSGYELDY 377
Query: 522 THYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIE 581
+VDL + G++++A + +P K + I + L+ C LA +++I+
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 582 LEPENGSVYVLLCNIYAACKRWENL---REVRTIMMERGIKKTP 622
L + V NI C +L +++ + +++G + P
Sbjct: 437 LGLDADQFIV--SNILKVCSSLASLGWGKQIHGLCIKKGYESEP 478
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 187/446 (41%), Gaps = 43/446 (9%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVF---DTIPHPSVFIWNTMIK 124
KQ+H +K GL S P + +I G + YA VF + SV +WN+M+
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDM--YSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 125 GYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDS 184
G+ ++ + + L + ++ DS+T LK N + L+ G + V G +
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 185 NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXX 244
+ V + L + G + AHK+F+ +++ ++ ++ G +
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 245 XXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMD 304
G+ + + IL CS L L G ++ + E V L+DM+ CGE+D
Sbjct: 436 KLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEID 495
Query: 305 AAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
+FD M RDV+SWT I+ GF G+++ A +YF +M
Sbjct: 496 NGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG---------------- 539
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS- 423
++P++ T + +L+AC H G LE + K++ + ++
Sbjct: 540 ---------------IEPNKVTFLGLLSACRHSGLLEEARSTLETM-KSEYGLEPYLEHY 583
Query: 424 -ALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEAL-TMFSNMIESS 480
++D+ + G ++A + +M + DK IWT+++ A H L T+ + +
Sbjct: 584 YCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLT--ACGTHKNAGLVTVIAEKLLKG 641
Query: 481 ITPDDITYIGVLSACTHAGMVEKGRK 506
D Y + +A GM ++ K
Sbjct: 642 FPDDPSVYTSLSNAYATLGMWDQLSK 667
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 153/355 (43%), Gaps = 63/355 (17%)
Query: 259 LSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDV 318
L C K+ G + ++ + + N+ + N ++ M+ + A VFD M R++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 319 ISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMS 378
++WT++VSG+ + G+ + A I+ Y RM E A
Sbjct: 72 VTWTTMVSGYTSDGKPNKA------------------IELYRRMLDSEEEAA-------- 105
Query: 379 HVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKA 438
+EF ++L AC +G ++LG V I K + D + ++++DMY K G + +A
Sbjct: 106 ----NEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEA 161
Query: 439 RKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSI--------------TPD 484
+FKE+ + W +I G G +EA+T+F M + ++ +P
Sbjct: 162 NSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR 221
Query: 485 DITYI------GV----------LSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMV 528
+ ++ G+ L AC+ G++ G++ + ++ G++ + ++
Sbjct: 222 ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCV-VKSGLESSPFAISALI 280
Query: 529 DLLSRAGHLKEALDVILNMPVKPNS--IVWGSLLGACRVHKNVELAEMAAKQIIE 581
D+ S G L A DV + NS VW S+L +++ E A QI +
Sbjct: 281 DMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ 335
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 256 bits (653), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 279/567 (49%), Gaps = 38/567 (6%)
Query: 66 QLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
QL IH +I G S+ + +I Q GDV +AR++FD I V W MI
Sbjct: 30 QLLLIHGNSITNGFCSNLQLKDMLIDLYLKQ--GDVKHARKLFDRISKRDVVSWTAMISR 87
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+SR + ++ M ++K + FT+ +LK + LK G + K N
Sbjct: 88 FSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGN 147
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
L V+ A + L++ CG ++ A F+ ++V+WN M+ GY
Sbjct: 148 LIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLT 207
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
G P+ T +L A IV L ++ ++ G A
Sbjct: 208 EGKKPDCFTFGSLLRA-------------------SIVVKCL---EIVSELHGL-----A 240
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH- 364
K F R S+V+ + G + A K + +RD +S TA+I G+ + N+
Sbjct: 241 IKLGFG----RSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 296
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTY-IDKNKINNDTFIGS 423
+A +F++M K DE + S+L C + ++ +G + + + ++I D +G+
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 356
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITP 483
+LIDMY K G +E A F+EM +KD WT++I G +G+ E+A+ +++ M I P
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416
Query: 484 DDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV 543
+D+T++ +LSAC+H G E G K + +M +HGI+ H C++D+L+R+G+L+EA +
Sbjct: 417 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 476
Query: 544 ILNMP--VKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACK 601
I + V +S WG+ L ACR H NV+L+++AA Q++ +EP Y+ L ++YAA
Sbjct: 477 IRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANG 536
Query: 602 RWENLREVRTIMMERG-IKKTPGCSLM 627
W+N R +M E G K PG SL+
Sbjct: 537 AWDNALNTRKLMKESGSCNKAPGYSLV 563
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 258/470 (54%), Gaps = 13/470 (2%)
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS 260
L+ AHK+F+ +V++ ++ + + G+ PN T ++
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 261 ACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVIS 320
+ + D+ G ++ Y + + N+ + + +L+ + + A+ FD+ + +V+S
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 321 WTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM-QMSH 379
T+++SG+ + + A F MPER V+W A+I G+ + EA+ F +M +
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 380 VKPDEFTMVSILTACAHLGALELGEWVKTYIDK---NKINNDTFIGSALIDMYFKCGNVE 436
V P+E T +TA +++ + G+ + K + N F+ ++LI Y KCGN+E
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFN--VFVWNSLISFYSKCGNME 279
Query: 437 KARKTFKEMHQKDKFI--WTAMIVGLAINGHGEEALTMFSNMI-ESSITPDDITYIGVLS 493
+ F ++ ++ + I W +MI G A NG GEEA+ MF M+ ++++ P+++T +GVL
Sbjct: 280 DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLF 339
Query: 494 ACTHAGMVEKGRKFFASMTIQHGIKPNV---THYGCMVDLLSRAGHLKEALDVILNMPVK 550
AC HAG++++G +F + + PN+ HY CMVD+LSR+G KEA ++I +MP+
Sbjct: 340 ACNHAGLIQEGYMYF-NKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 551 PNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVR 610
P W +LLG C++H N LA++AA +I+EL+P + S YV+L N Y+A + W+N+ +R
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIR 458
Query: 611 TIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDL 660
M E G+K+ GCS +E+ I FV D+++ E+Y L + Q L
Sbjct: 459 RKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHL 508
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 184/439 (41%), Gaps = 77/439 (17%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
+S + A +VFD IP V +I + + S + +L I+P+ FTF
Sbjct: 39 DSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGT 98
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLF-SLCGLVDL----------- 204
++ T +K GK L +A+K+GL SN+FV A ++ + L L D
Sbjct: 99 VIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPN 158
Query: 205 -------------------AHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
A +F VVTWN ++ G+++
Sbjct: 159 VVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLR 218
Query: 246 XGVS-PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEP-NLVMENVLLDMFGACGEM 303
GV PN T ++A S + G ++ + + + N+ + N L+ + CG M
Sbjct: 219 EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 304 DAAKGVFDNM--KTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLR 361
+ + F+ + + R+++SW S++ G+A+ G+ +
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGE-------------------------- 312
Query: 362 MNHFREALALFREM-QMSHVKPDEFTMVSILTACAHLGALELG-----EWVKTYIDKNKI 415
EA+A+F +M + ++++P+ T++ +L AC H G ++ G + V Y D N +
Sbjct: 313 -----EAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLL 367
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKF-IWTAMIVGLAINGHGEEALTMFS 474
+ + + ++DM + G ++A + K M W A++ G I+ + A S
Sbjct: 368 ELEHY--ACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAAS 425
Query: 475 NMIESSITPDDITYIGVLS 493
++E + P D++ +LS
Sbjct: 426 KILE--LDPRDVSSYVMLS 442
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 169/390 (43%), Gaps = 52/390 (13%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVI-----------AFCCTQESGD---------------- 100
KQ+H +KMGL+S+ G+ V+ A C ++ D
Sbjct: 113 KQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKK 172
Query: 101 --VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIK-PDSFTFPFL 157
+ A +F +P SV WN +I G+S+ + ++ ++ ML + P+ TFP
Sbjct: 173 HEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCA 232
Query: 158 LKGFTNDMALKYGKVLLDHAVK-LGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
+ +N + GK + A+K LG N+FV + I +S CG ++ + FN + +
Sbjct: 233 ITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQ 292
Query: 217 --VVTWNVMLSGY-NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY 273
+V+WN M+ GY + + PN+VT++ +L AC+ + G
Sbjct: 293 RNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYM 352
Query: 274 VYQYLTEGIVEPNLV-MEN--VLLDMFGACGEMDAAKGVFDNMKTRDVIS-WTSIVSG-- 327
+ +PNL+ +E+ ++DM G A+ + +M I W +++ G
Sbjct: 353 YFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQ 412
Query: 328 -FANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
+N LA ++ RD S+ + + Y M +++ + R+M+ + +K
Sbjct: 413 IHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKR---- 468
Query: 387 MVSILTACAHLGALELGEWVKTYIDKNKIN 416
T C+ +E+ + ++ +++ +K N
Sbjct: 469 ----FTGCSW---IEVRDQIRVFVNADKNN 491
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 210/347 (60%), Gaps = 5/347 (1%)
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQ 343
E ++ ++ L+ M+ G M A VFD M R+ ++W +++G N G + A + ++
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 344 MPERDYVSWTAMIDGYLRMNHFREALALFREM-QMSHVKPDEFTMVSILTACAHLGALEL 402
MP R VSWT +IDGY R++ +EA+ LF M +KP+E T+++IL A +LG L++
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 403 GEWVKTYIDKNK-INNDTFIGSALIDMYFKCGNVEKARKTFKEMH--QKDKFIWTAMIVG 459
V Y+ K + D + ++LID Y KCG ++ A K F E+ +K+ WT MI
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 460 LAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG-RKFFASMTIQHGIK 518
AI+G G+EA++MF +M + P+ +T I VL+AC+H G+ E+ +FF +M ++ I
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 519 PNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQ 578
P+V HYGC+VD+L R G L+EA + L +P++ ++VW LLGAC V+ + ELAE ++
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRK 454
Query: 579 IIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCS 625
++ELE +G YVL+ NI+ R+ + + R M RG+ K PG S
Sbjct: 455 LMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 176/392 (44%), Gaps = 79/392 (20%)
Query: 116 VFIWNTMIKGYSRISCPKSGISMY-----LLMLA-HN--IKP-DSFTFPFLLKGFTNDM- 165
+F++N +++ YS P +Y L L+ HN + P DSFT+ FLLK +N
Sbjct: 77 LFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRF 136
Query: 166 -ALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVML 224
+L G L +KLG +S+++VQ A + ++ + G + AHK+F+ VTWNVM+
Sbjct: 137 PSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMI 196
Query: 225 S-------------------------------GYNRVXXXXXXXXXXXXXXX-XGVSPNS 252
+ GY RV + PN
Sbjct: 197 TGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNE 256
Query: 253 VTLVLILSACSKLTDLAGGNYVYQYL-TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFD 311
+T++ IL A L DL V+ Y+ G V ++ + N L+D + CG + +A F
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFI 316
Query: 312 NMKT--RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREAL 369
+ ++++SWT+++S FA G +EA+
Sbjct: 317 EIPNGRKNLVSWTTMISAFAIHGM-------------------------------GKEAV 345
Query: 370 ALFREMQMSHVKPDEFTMVSILTACAH--LGALELGEWVKTYIDKNKINNDTFIGSALID 427
++F++M+ +KP+ TM+S+L AC+H L E E+ T +++ KI D L+D
Sbjct: 346 SMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVD 405
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVG 459
M + G +E+A K E+ ++K + M++G
Sbjct: 406 MLRRKGRLEEAEKIALEIPIEEKAVVWRMLLG 437
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 123/287 (42%), Gaps = 16/287 (5%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN-IKPDSFTFPFL 157
GD + A + +P+ +V W T+I GY+R+ PK I ++ M+A + IKP+ T +
Sbjct: 203 GDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAI 262
Query: 158 LKGFTNDMALKYGKVLLDHAVKLG-LDSNLFVQKAFIHLFSLCGLVDLAHKIFNM--GDA 214
L N LK + + K G + ++ V + I ++ CG + A K F
Sbjct: 263 LPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGR 322
Query: 215 WEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK--LTDLAGGN 272
+V+W M+S + G+ PN VT++ +L+ACS L +
Sbjct: 323 KNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLE 382
Query: 273 YVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD-VISWTSIVSGFANT 331
+ + E + P++ L+DM G ++ A+ + + + + W ++ +
Sbjct: 383 FFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVY 442
Query: 332 GQIDLARKYFDQMPER------DYVSWTAMIDG---YLRMNHFREAL 369
+LA + ++ E DYV + + G +L FR+ +
Sbjct: 443 DDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQM 489
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 255/528 (48%), Gaps = 71/528 (13%)
Query: 66 QLKQIHSKTIKM-GLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIK 124
QL QIH++ I L + +++I+ CCT+ Y R +FD++ P+VF+ N+M K
Sbjct: 21 QLNQIHAQLIVFNSLPRQSYWASRIIS-CCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFK 79
Query: 125 GYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLK----------------GFTNDMALK 168
+S++ + +Y I PD+F+FP ++K GF D ++
Sbjct: 80 YFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVR 139
Query: 169 YGKVLLDHAVK-----------------LGLDSNLFVQKAFI--HLFSLCGLVDL----- 204
V++D VK G D N+ + + + C L D+
Sbjct: 140 --NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEND 197
Query: 205 -------------------AHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
A K F+ VV+WN MLSGY +
Sbjct: 198 VVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLR 257
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
GV PN T V+++SACS D + + + + E V N ++ LLDM C ++ +
Sbjct: 258 LGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQS 317
Query: 306 AKGVFDNMKT-RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNH 364
A+ +F+ + T R++++W +++SG+ G + AR+ FD MP+R+ VSW ++I GY
Sbjct: 318 ARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQ 377
Query: 365 FREALALFREM-QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
A+ F +M KPDE TM+S+L+AC H+ LELG+ + YI KN+I +
Sbjct: 378 AALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYR 437
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITP 483
+LI MY + GN+ +A++ F EM ++D + + A NG G E L + S M + I P
Sbjct: 438 SLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEP 497
Query: 484 DDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
D +TY VL+AC AG++++G++ F S+ P HY CM DLL
Sbjct: 498 DRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 41/357 (11%)
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV 350
NV++ + G + A +FD M DV+SWT +++GFA ++ ARKYFD+MPE+ V
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV 230
Query: 351 SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYI 410
SW AM+ GY + +AL LF +M V+P+E T V +++AC+ L + I
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 411 DKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE-------------------------- 444
D+ ++ + F+ +AL+DM+ KC +++ AR+ F E
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 445 ------MHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE-SSITPDDITYIGVLSACTH 497
M +++ W ++I G A NG A+ F +MI+ PD++T I VLSAC H
Sbjct: 351 RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 498 AGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWG 557
+E G ++ IK N + Y ++ + +R G+L EA V M + + + +
Sbjct: 411 MADLELG-DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER-DVVSYN 468
Query: 558 SLLGACRVHKN-VELAEMAAKQIIE-LEPENGSVYVLLCNIYAACKRWENLREVRTI 612
+L A + + VE + +K E +EP+ V ++ AC R L+E + I
Sbjct: 469 TLFTAFAANGDGVETLNLLSKMKDEGIEPDR----VTYTSVLTACNRAGLLKEGQRI 521
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 139/313 (44%), Gaps = 26/313 (8%)
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
R FD + + +M + +M+ + L L+ + + PD F+ ++ +
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF 119
Query: 398 GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMI 457
G L + ++K D ++ + ++DMY K +VE ARK F ++ Q+ W MI
Sbjct: 120 GIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
G G+ EEA +F M E+ + +++ +++ +E RK+F M
Sbjct: 175 SGYWKWGNKEEACKLFDMMPENDV----VSWTVMITGFAKVKDLENARKYFDRMP----- 225
Query: 518 KPNVTHYGCMVDLLSRAGHLKEALDV---ILNMPVKPNSIVWGSLLGACRVHKNVELAEM 574
+ +V + M+ ++ G ++AL + +L + V+PN W ++ AC + L
Sbjct: 226 EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRS 285
Query: 575 AAKQIIELEPE-NGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGII 633
K I E N V L +++A C+ +++ R I E G ++ +L+ N +I
Sbjct: 286 LVKLIDEKRVRLNCFVKTALLDMHAKCR---DIQSARRIFNELGTQR----NLVTWNAMI 338
Query: 634 YEFVA-GDQSHPQ 645
+ GD S +
Sbjct: 339 SGYTRIGDMSSAR 351
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 111/239 (46%), Gaps = 7/239 (2%)
Query: 48 HCFGETPI-SLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQ 106
+CF +T + + +C+ ++I ++ +G + V N +I+ GD+ ARQ
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFNE---LGTQRNLVTWNAMIS--GYTRIGDMSSARQ 352
Query: 107 VFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAH-NIKPDSFTFPFLLKGFTNDM 165
+FDT+P +V WN++I GY+ I + M+ + + KPD T +L +
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 166 ALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLS 225
L+ G ++D+ K + N ++ I +++ G + A ++F+ +VV++N + +
Sbjct: 413 DLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFT 472
Query: 226 GYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
+ G+ P+ VT +L+AC++ L G +++ + + +
Sbjct: 473 AFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLAD 531
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 249 bits (636), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 285/580 (49%), Gaps = 39/580 (6%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRI 129
++S+ IK+G S + V V+ + GD++ AR++FD + + WNTMI G +
Sbjct: 221 LNSQIIKLGYSDNVVVQTSVLGMYSS--CGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 130 SCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDS--NLF 187
+ G+ + ML + P FT+ +L G + + GK++ HA + DS +L
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI--HARIIVSDSLADLP 336
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+ A + ++ CG + A +F +V+WN ++SG + G
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSE----------------NG 380
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
++ L+ +++ Y + EP + LL G ++ +
Sbjct: 381 FGEQAM---LMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH--GQVTKLGYER 435
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
VF T+++S + + + A+K FD M ERD V WT MI G+ R+ +
Sbjct: 436 SVFVG---------TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSEL 486
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
A+ F EM + D F++ S++ AC+ + L GE + + + AL+D
Sbjct: 487 AVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVD 546
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
MY K G E A F D W +M+ + +G E+AL+ F ++E+ PD +T
Sbjct: 547 MYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVT 606
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
Y+ +L+AC+H G +G KF + + GIK HY CMV+L+S+AG + EAL++I
Sbjct: 607 YLSLLAACSHRGSTLQG-KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQS 665
Query: 548 PVKPNSI-VWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENL 606
P N +W +LL AC +N+++ AA+QI++L+PE+ + ++LL N+YA RWE++
Sbjct: 666 PPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDV 725
Query: 607 REVRTIMMERGIKKTPGCSLMEMNGIIYE-FVAGDQSHPQ 645
E+R + K PG S +E+N + F +GDQS+P+
Sbjct: 726 AEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 170/650 (26%), Positives = 287/650 (44%), Gaps = 60/650 (9%)
Query: 55 ISLLERCKSTYQLK---QIHSKTIKMGL---SSDPVFGNKVIAFCCTQESGDVDYARQVF 108
+ L +C S LK QIH+ + G + P N +I+ G ++ AR+VF
Sbjct: 98 VELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYV--RCGSLEQARKVF 155
Query: 109 DTIPHPSVFIWNTMIKGYSRISCPKS-GISMYLLMLAHNIKPDSFTFPFLLKGFTNDMAL 167
D +PH +V +N + YSR S + M +KP+S TF L++ +
Sbjct: 156 DKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDV 215
Query: 168 KYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY 227
G L +KLG N+ VQ + + ++S CG ++ A +IF+ + + V WN M+ G
Sbjct: 216 LMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGS 275
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
+ GV P T ++L+ CSKL + G ++ + +L
Sbjct: 276 LKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADL 335
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER 347
++N LLDM+ +CG+M A VF + ++
Sbjct: 336 PLDNALLDMYCSCGDMREAFYVFGRIHNPNL----------------------------- 366
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREM-QMSHVKPDEFTMVSILTACAHLGALELGEWV 406
VSW ++I G +A+ ++R + +MS +PDE+T + ++A A G+ +
Sbjct: 367 --VSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHG 466
+ K F+G+ L+ MYFK E A+K F M ++D +WT MIVG + G+
Sbjct: 425 HGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNS 484
Query: 467 EEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGC 526
E A+ F M D + V+ AC+ M+ +G + F + I+ G ++ G
Sbjct: 485 ELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGA 543
Query: 527 MVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPEN 586
+VD+ + G + A + I ++ P+ W S+LGA H VE A +QI+ EN
Sbjct: 544 LVDMYGKNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL----EN 598
Query: 587 GSV--YVLLCNIYAACKRWENLREVRTI---MMERGIK---KTPGC--SLMEMNGIIYEF 636
G + V ++ AAC + + + + M E+GIK K C +L+ G++ E
Sbjct: 599 GFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEA 658
Query: 637 VAG-DQSHP--QSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKET 683
+ +QS P E++ L + + N +E L + ED T
Sbjct: 659 LELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTAT 708
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 15/251 (5%)
Query: 323 SIVSGFANTGQIDLARKYFDQMPERDYVSWTAM--IDGYLRM-NHFREALALFREMQMSH 379
+++S + ++ ARK FD+MP+R+ V+ + + Y+ M + + QM
Sbjct: 27 NLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIF 86
Query: 380 VKP-DEF--TMVSILTACAHLGALELGEWVKTYI---DKNKINNDTFIGSALIDMYFKCG 433
P +E ++V + C + L+ + + + + LI MY +CG
Sbjct: 87 FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCG 146
Query: 434 NVEKARKTFKEMHQKDKFIWTAMIVGLAIN-GHGEEALTMFSNMIESSITPDDITYIGVL 492
++E+ARK F +M ++ + A+ + N A + ++M + P+ T+ ++
Sbjct: 147 SLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLV 206
Query: 493 SACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA---LDVILNM-P 548
C V G S I+ G NV ++ + S G L+ A D + N
Sbjct: 207 QVCAVLEDVLMGSS-LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDA 265
Query: 549 VKPNSIVWGSL 559
V N+++ GSL
Sbjct: 266 VAWNTMIVGSL 276
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 206/377 (54%), Gaps = 2/377 (0%)
Query: 178 VKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXX 237
+K L ++ + + I + S G A +FN + TWN+M+ +
Sbjct: 44 IKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREAL 103
Query: 238 XXXXXXXXXGVSP-NSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDM 296
S + T ++ AC + + G V+ + ++ +N L+D+
Sbjct: 104 LLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDL 163
Query: 297 FGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMI 356
+ CG+ D+ + VFD M R ++SWT+++ G + Q+D A F+QMP R+ VSWTAMI
Sbjct: 164 YFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMI 223
Query: 357 DGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN 416
Y++ EA LFR MQ+ VKP+EFT+V++L A LG+L +G WV Y KN
Sbjct: 224 TAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFV 283
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMF-SN 475
D F+G+ALIDMY KCG+++ ARK F M K W +MI L ++G GEEAL++F
Sbjct: 284 LDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEM 343
Query: 476 MIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAG 535
E+S+ PD IT++GVLSAC + G V+ G ++F M +GI P H CM+ LL +A
Sbjct: 344 EEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQAL 403
Query: 536 HLKEALDVILNMPVKPN 552
+++A +++ +M P+
Sbjct: 404 EVEKASNLVESMDSDPD 420
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 166/380 (43%), Gaps = 66/380 (17%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSV 116
L C + QLKQIH+K IK L++D + ++I+ + G+ YA VF+ + PS
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLIS--VSSSFGETQYASLVFNQLQSPST 83
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLML-AHNIKPDSFTFPFLLKGFTNDMALKYGKVLLD 175
F WN MI+ S P+ + +++LM+ +H + D FTFPF++K +++ G +
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 176 HAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHK---------------------------- 207
A+K G +++F Q + L+ CG D K
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 208 ---IFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK 264
+FN VV+W M++ Y + V PN T+V +L A ++
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 265 LTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSI 324
L L+ G +V+ Y + + + L+DM+ CG + A+ VFD M+ + + +W S+
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSM 323
Query: 325 VSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALF-REMQMSHVKPD 383
++ G + EAL+LF + + V+PD
Sbjct: 324 ITSLGVHGCGE-------------------------------EALSLFEEMEEEASVEPD 352
Query: 384 EFTMVSILTACAHLGALELG 403
T V +L+ACA+ G ++ G
Sbjct: 353 AITFVGVLSACANTGNVKDG 372
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 8/192 (4%)
Query: 390 ILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKD 449
L C++ L+ + T I K+ + ND + LI + G + A F ++
Sbjct: 26 FLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 450 KFIWTAMIVGLAINGHGEEALTMFSNMIESSITP-DDITYIGVLSACTHAGMVEKGRKFF 508
F W MI L++N EAL +F M+ S + D T+ V+ AC + + G +
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 509 ASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIV-WGSLLGACRVHK 567
+ I+ G +V ++DL + G V MP + SIV W ++L +
Sbjct: 143 G-LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGR--SIVSWTTMLYGLVSNS 199
Query: 568 NVELAEMAAKQI 579
++ AE+ Q+
Sbjct: 200 QLDSAEIVFNQM 211
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 190/322 (59%), Gaps = 16/322 (4%)
Query: 322 TSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYL----RMNH-FREALALFREMQ 376
T+++ +A G + ARK FD+MPER V+W AMI GY + NH R+A+ LFR
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 377 M--SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINN--DTFIGSALIDMYFKC 432
S V+P + TMV +L+A + G LE+G V YI+K D FIG+AL+DMY KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 433 GNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVL 492
G + A F+ M K+ F WT+M GLA+NG G E + + M ES I P++IT+ +L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 493 SACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPN 552
SA H G+VE+G + F SM + G+ P + HYGC+VDLL +AG ++EA IL MP+KP+
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 553 SIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSV-------YVLLCNIYAACKRWEN 605
+I+ SL AC ++ + E K ++E+E E+ + YV L N+ A +W
Sbjct: 391 AILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Query: 606 LREVRTIMMERGIKKTPGCSLM 627
+ ++R M ER IK PG S +
Sbjct: 451 VEKLRKEMKERRIKTRPGYSFV 472
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 201/466 (43%), Gaps = 72/466 (15%)
Query: 51 GETPISLLER-CKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQ--- 106
G +SLL++ K+ Q KQIH++ + G + +FG K+I C++ S +
Sbjct: 7 GPRFLSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFG-KLIGHYCSKPSTESSSKLAHLL 65
Query: 107 VFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN--IKPDSFTFPFLL---KGF 161
VF HP F++NT++K S P+ I ++ + + + + TF F+L
Sbjct: 66 VFPRFGHPDKFLFNTLLK----CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARS 121
Query: 162 TNDMALKYGKVLLDHAVKLG-LDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTW 220
+ AL+ G+++ KLG L + + +H ++ G + A K+F+ VTW
Sbjct: 122 ASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTW 181
Query: 221 NVMLSGY-------NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY 273
N M+ GY N GV P T+V +LSA S+ L G+
Sbjct: 182 NAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSL 241
Query: 274 VYQYLTEGIVEP--NLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANT 331
V+ Y+ + P ++ + L+DM+ CG ++ A VF+ MK ++V +WTS+ +G A
Sbjct: 242 VHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALN 301
Query: 332 GQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQ--------MSH 379
G+ + ++M E + +++T+++ Y + E + LF+ M+ + H
Sbjct: 302 GRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEH 361
Query: 380 -------------------------VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNK 414
+KPD + S+ AC+ G +GE + + + +
Sbjct: 362 YGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIE 421
Query: 415 INNDTFIGSALIDMYFKCGN----------VEKARKTFKEMHQKDK 450
++ GS D Y N VEK RK KE K +
Sbjct: 422 REDEKLSGSECED-YVALSNVLAHKGKWVEVEKLRKEMKERRIKTR 466
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 420 FIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAI-----NGHGEEALTMFS 474
IG+ L+ Y K G++ ARK F EM ++ W AMI G N + +A+ +F
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFR 207
Query: 475 NM--IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHY--GCMVDL 530
S + P D T + VLSA + G++E G + + G P V + +VD+
Sbjct: 208 RFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE-KLGFTPEVDVFIGTALVDM 266
Query: 531 LSRAGHLKEALDVILNMPVKPNSIVWGSL 559
S+ G L A V M VK N W S+
Sbjct: 267 YSKCGCLNNAFSVFELMKVK-NVFTWTSM 294
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 242 bits (618), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 211/374 (56%), Gaps = 8/374 (2%)
Query: 257 LILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR 316
L L +C+ G V+ + + N + LLDM+G C + A+ +FD + R
Sbjct: 53 LALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQR 112
Query: 317 DVISWTSIVSGFANTGQIDLARKYF---DQMPERDYVSWTAMIDGYLRMN--HFREALAL 371
+ + W +++S + + G++ A + + D MP S+ A+I G + +R A+
Sbjct: 113 NAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES--SFNAIIKGLVGTEDGSYR-AIEF 169
Query: 372 FREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFK 431
+R+M KP+ T++++++AC+ +GA L + + +Y +N I + S L++ Y +
Sbjct: 170 YRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGR 229
Query: 432 CGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGV 491
CG++ + F M +D W+++I A++G E AL F M + +TPDDI ++ V
Sbjct: 230 CGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNV 289
Query: 492 LSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKP 551
L AC+HAG+ ++ +F M +G++ + HY C+VD+LSR G +EA VI MP KP
Sbjct: 290 LKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKP 349
Query: 552 NSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRT 611
+ WG+LLGACR + +ELAE+AA++++ +EPEN + YVLL IY + R E +R
Sbjct: 350 TAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRL 409
Query: 612 IMMERGIKKTPGCS 625
M E G+K +PG S
Sbjct: 410 KMKESGVKVSPGSS 423
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 148/376 (39%), Gaps = 77/376 (20%)
Query: 123 IKGYSRISCPKSGISMYLLMLAHNIKP-DSFTFPFLLKGFTNDMALKYGKVLLDHAVKLG 181
+ Y+ + ++++L M + P D+ F LK G + H+VK
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 182 LDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXX 241
SN FV A + ++ C V A K+F+ V WN M+S Y
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 242 XXXXXG---------------------------------VSPNSVTLVLILSACSKLTDL 268
PN +TL+ ++SACS +
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 269 AGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGF 328
++ Y ++EP+ +++ L++ +G CG + + VFD+M+ RDV++W+S++S +
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 329 ANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMV 388
A G + AL F+EM+++ V PD+ +
Sbjct: 259 ALHGDAE-------------------------------SALKTFQEMELAKVTPDDIAFL 287
Query: 389 SILTACAHLGALELGEWVKTYIDKN------KINNDTFIGSALIDMYFKCGNVEKARKTF 442
++L AC+H G L + Y + + + D + S L+D+ + G E+A K
Sbjct: 288 NVLKACSHAG---LADEALVYFKRMQGDYGLRASKDHY--SCLVDVLSRVGRFEEAYKVI 342
Query: 443 KEMHQKDKF-IWTAMI 457
+ M +K W A++
Sbjct: 343 QAMPEKPTAKTWGALL 358
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 224/386 (58%), Gaps = 7/386 (1%)
Query: 248 VSPNSVTL-VLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
V PN++T LI +ACS + G Q L G + V + + +G G+++++
Sbjct: 82 VQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFV-QTSFVRFYGEVGDLESS 140
Query: 307 KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
+ +FD++ V++ S++ G++D A +YF +MP D VSWT +I+G+ +
Sbjct: 141 RKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA 200
Query: 367 EALALFREM---QMSHVKPDEFTMVSILTACAHL--GALELGEWVKTYIDKNKINNDTFI 421
+AL +F EM + + + P+E T VS+L++CA+ G + LG+ + Y+ +I T +
Sbjct: 201 KALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTL 260
Query: 422 GSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSI 481
G+AL+DMY K G++E A F ++ K W A+I LA NG ++AL MF M S +
Sbjct: 261 GTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYV 320
Query: 482 TPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEAL 541
P+ IT + +L+AC + +V+ G + F+S+ ++ I P HYGC+VDL+ RAG L +A
Sbjct: 321 HPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAA 380
Query: 542 DVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACK 601
+ I ++P +P++ V G+LLGAC++H+N EL KQ+I L+P++ YV L A
Sbjct: 381 NFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDS 440
Query: 602 RWENLREVRTIMMERGIKKTPGCSLM 627
W ++R M+E GI+K P S++
Sbjct: 441 NWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 147/323 (45%), Gaps = 69/323 (21%)
Query: 118 IWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHA 177
++NT+I+ Y K+ ++++ MLA +++P++ TFP L+K + ++ YG L A
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 178 VKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN----------------------MGDAW 215
+K G + FVQ +F+ + G ++ + K+F+ M A+
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 216 E---------VVTWNVMLSGYNRV---XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
E VV+W +++G+++ ++PN T V +LS+C+
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 264 KLTDLAG---GNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVIS 320
D G G ++ Y+ + + LLDM+G G+++ A +FD ++ + V +
Sbjct: 233 NF-DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 321 WTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHV 380
W +I+S A+ G+ P ++AL +F M+ S+V
Sbjct: 292 WNAIISALASNGR-----------P--------------------KQALEMFEMMKSSYV 320
Query: 381 KPDEFTMVSILTACAHLGALELG 403
P+ T+++ILTACA ++LG
Sbjct: 321 HPNGITLLAILTACARSKLVDLG 343
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 120/291 (41%), Gaps = 48/291 (16%)
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
+ +I YL ++ +LALF M SHV+P+ T S++ A ++ G +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKT------------------------------ 441
K D F+ ++ + Y + G++E +RK
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 442 -FKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS---ITPDDITYIGVLSACTH 497
F+ M D WT +I G + G +AL +F MI++ ITP++ T++ VLS+C +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 498 --AGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIV 555
G + G++ + I T ++D+ +AG L+ AL I +
Sbjct: 234 FDQGGIRLGKQIHG-YVMSKEIILTTTLGTALLDMYGKAGDLEMAL-TIFDQIRDKKVCA 291
Query: 556 WGSLLGAC----RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKR 602
W +++ A R + +E+ EM + NG + L I AC R
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVH---PNG---ITLLAILTACAR 336
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 9/218 (4%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN---IKPDSFT 153
+G++DYA + F +P V W T+I G+S+ + ++ M+ + I P+ T
Sbjct: 164 RNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEAT 223
Query: 154 FPFLLKGFTN--DMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM 211
F +L N ++ GK + + + + + A + ++ G +++A IF+
Sbjct: 224 FVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQ 283
Query: 212 GDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSAC--SKLTDLA 269
+V WN ++S V PN +TL+ IL+AC SKL DL
Sbjct: 284 IRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDL- 342
Query: 270 GGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEM-DAA 306
G +E + P ++D+ G G + DAA
Sbjct: 343 GIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAA 380
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 170/577 (29%), Positives = 269/577 (46%), Gaps = 63/577 (10%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAF----------CCTQESGDVDYARQVFDTIPHPSVF 117
KQ+HS IK G N +I C E DV QV
Sbjct: 209 KQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQV---------- 258
Query: 118 IWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHA 177
+N +I G + +S + ++ ML +++P TF ++ G + A+ G + A
Sbjct: 259 TFNVVIDGLAGFKRDES-LLVFRKMLEASLRPTDLTFVSVM-GSCSCAAM--GHQVHGLA 314
Query: 178 VKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXX 237
+K G + V A + ++S AHK+F + ++VTWN M+S YN+
Sbjct: 315 IKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAM 374
Query: 238 XXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMF 297
GV P+ T +L+ L +L+M
Sbjct: 375 SVYKRMHIIGVKPDEFTFGSLLATSLDLD--------------------------VLEMV 408
Query: 298 GACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMID 357
AC + + ++ IS +++S ++ GQI+ A F++ ++ +SW A+I
Sbjct: 409 QACI-------IKFGLSSKIEIS-NALISAYSKNGQIEKADLLFERSLRKNLISWNAIIS 460
Query: 358 GYLRMNHFREALALFREMQMSHVK--PDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
G+ E L F + S V+ PD +T+ ++L+ C +L LG Y+ ++
Sbjct: 461 GFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQ 520
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSN 475
+T IG+ALI+MY +CG ++ + + F +M +KD W ++I + +G GE A+ +
Sbjct: 521 FKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKT 580
Query: 476 MI-ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRA 534
M E + PD T+ VLSAC+HAG+VE+G + F SM HG+ NV H+ C+VDLL RA
Sbjct: 581 MQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRA 640
Query: 535 GHLKEA--LDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVL 592
GHL EA L I + VW +L AC H +++L +M AK ++E E ++ SVYV
Sbjct: 641 GHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQ 700
Query: 593 LCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEM 629
L NIYA W+ E R + G K GCS M +
Sbjct: 701 LSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 233/536 (43%), Gaps = 59/536 (11%)
Query: 45 CDPHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYA 104
C H T +SL ER + LK+ K +P + + + GD++YA
Sbjct: 90 CHSHV-SNTLLSLYERLGNLASLKK------KFDEIDEPDVYSWTTLLSASFKLGDIEYA 142
Query: 105 RQVFDTIP-HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN 163
+VFD +P V IWN MI G ++ + ++ M ++ D F F +L +
Sbjct: 143 FEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS-MCD 201
Query: 164 DMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGD--AWEVVTWN 221
+L +GK + +K G V A I ++ C +V A +F D + VT+N
Sbjct: 202 YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFN 261
Query: 222 VM---LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL 278
V+ L+G+ R + P +T V ++ +CS A G+ V+
Sbjct: 262 VVIDGLAGFKR----DESLLVFRKMLEASLRPTDLTFVSVMGSCSC---AAMGHQVHGLA 314
Query: 279 TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLAR 338
+ E ++ N + M+ + + AA VF++++ +D+++W +++S + Q L +
Sbjct: 315 IKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSY---NQAKLGK 371
Query: 339 KYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLG 398
A+++++ M + VKPDEFT S+L L
Sbjct: 372 S----------------------------AMSVYKRMHIIGVKPDEFTFGSLLATSLDLD 403
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIV 458
LE+ V+ I K +++ I +ALI Y K G +EKA F+ +K+ W A+I
Sbjct: 404 VLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIIS 460
Query: 459 GLAINGHGEEALTMFSNMIESS--ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
G NG E L FS ++ES I PD T +LS C + G + A ++HG
Sbjct: 461 GFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHA-YVLRHG 519
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA 572
++++ S+ G ++ +L+V M K + + W SL+ A H E A
Sbjct: 520 QFKETLIGNALINMYSQCGTIQNSLEVFNQMSEK-DVVSWNSLISAYSRHGEGENA 574
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 200/420 (47%), Gaps = 45/420 (10%)
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
P+ ++ L ++ L D G V+ Y + + + N LL ++ G + + K
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 310 FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS-WTAMIDGYLRMNHFREA 368
FD + DV SWT+++S G I+ A + FD+MPERD V+ W AMI G + +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 369 LALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDM 428
+ LFREM V+ D+F +IL+ C + G+L+ G+ V + + K + + +ALI M
Sbjct: 175 VELFREMHKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITM 233
Query: 429 YFKCGNVEKARKTFKE--MHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
YF C V A F+E + +D+ + +I GLA +E+L +F M+E+S+ P D+
Sbjct: 234 YFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA-GFKRDESLLVFRKMLEASLRPTDL 292
Query: 487 TYIGVLSACTHAGM--------VEKGRKFF-----ASMTI---------QHGI-----KP 519
T++ V+ +C+ A M ++ G + + A+MT+ H + +
Sbjct: 293 TFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEK 352
Query: 520 NVTHYGCMVDLLSRAGHLKEALDVILNM---PVKPNSIVWGSLLGACRVHKNVELAEMAA 576
++ + M+ ++A K A+ V M VKP+ +GSLL ++++ EM
Sbjct: 353 DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSL---DLDVLEMVQ 409
Query: 577 KQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEF 636
II+ S + + N + E ++ ER ++K +L+ N II F
Sbjct: 410 ACIIKF---GLSSKIEISNALISAYSKNGQIEKADLLFERSLRK----NLISWNAIISGF 462
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 197/458 (43%), Gaps = 50/458 (10%)
Query: 53 TPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
T +S++ C Q+H IK G + N + + E D A +VF+++
Sbjct: 293 TFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFE--DFGAAHKVFESLE 350
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
+ WNTMI Y++ KS +S+Y M +KPD FTF LL + L ++
Sbjct: 351 EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEM 407
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY--NRV 230
+ +K GL S + + A I +S G ++ A +F +++WN ++SG+ N
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGF 467
Query: 231 XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY-LTEGIVEPNLVM 289
+ P++ TL +LS C + L G+ + Y L G + L+
Sbjct: 468 PFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLI- 526
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY 349
N L++M+ CG + + VF+ M +DV+SW S++S ++ G+ + A + M +
Sbjct: 527 GNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDE-- 584
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKT 408
V PD T ++L+AC+H G +E G E +
Sbjct: 585 ----------------------------GKVIPDAATFSAVLSACSHAGLVEEGLEIFNS 616
Query: 409 YIDKNKI--NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ---KDKFIWTAMIVGLAIN 463
++ + + N D F S L+D+ + G++++A K + +W A+ A
Sbjct: 617 MVEFHGVIRNVDHF--SCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACA-- 672
Query: 464 GHGEEAL-TMFSNMIESSITPDDITYIGVLSACTHAGM 500
HG+ L M + ++ D Y+ + + AGM
Sbjct: 673 AHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGM 710
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 356 IDGYLRMNHFREALALFREM-QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNK 414
+ G R R AL LF ++ + + ++PD++++ +T HL G V Y ++
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 415 INNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFS 474
+ + + + L+ +Y + GN+ +K F E+ + D + WT ++ G E A +F
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 475 NMIESSITPDDIT-YIGVLSACTHAGMVEKGRKFFASM 511
M E DD+ + +++ C +G E + F M
Sbjct: 148 KMPE----RDDVAIWNAMITGCKESGYHETSVELFREM 181
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/570 (27%), Positives = 274/570 (48%), Gaps = 48/570 (8%)
Query: 67 LKQIHSKTIKMGLSSDPVFGNKVI-AFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
+KQ H +K G+ + NK++ A+ +E D D ++FD +P ++ WN +I G
Sbjct: 55 VKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDAD---KLFDEMPLRNIVTWNILIHG 111
Query: 126 YSRISCPKS-----GISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKL 180
+ + G +L ++ D +F L++ T+ +K G L VK
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 181 GLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY--NRVXXXXXXXX 238
GL+S+ F + +H + CGL+ A ++F ++V WN ++S Y N +
Sbjct: 172 GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLL 231
Query: 239 XXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFG 298
+ T +LSAC + G ++ L + + ++ + LL+M+
Sbjct: 232 KLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMY- 286
Query: 299 ACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDG 358
A + + AR+ F+ M R+ VSW AMI G
Sbjct: 287 ------------------------------AKSNHLSDARECFESMVVRNVVSWNAMIVG 316
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
+ + REA+ LF +M + +++PDE T S+L++CA A+ + V+ + K +
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF 376
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
+ ++LI Y + GN+ +A F + + D WT++I LA +G EE+L MF +M++
Sbjct: 377 LSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ 436
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
+ PD IT++ VLSAC+H G+V++G + F MT + I+ HY C++DLL RAG +
Sbjct: 437 K-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFID 495
Query: 539 EALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYA 598
EA DV+ +MP +P++ + G C +H+ E + AK+++E+EP Y +L N Y
Sbjct: 496 EASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYV 555
Query: 599 ACKRWENLREVRTIMMERGIK-KTPGCSLM 627
+ W +R KTPGCS +
Sbjct: 556 SEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 163/397 (41%), Gaps = 44/397 (11%)
Query: 55 ISLLERCKSTYQLK---QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTI 111
+ L+ C + +K Q+H +K GL S ++ F + G + AR+VF+ +
Sbjct: 146 MGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHF--YGKCGLIVEARRVFEAV 203
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLA--HNIKPDSFTFPFLLKGFTNDMALKY 169
+ +WN ++ Y + LM + + + D FTF LL ++
Sbjct: 204 LDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSA----CRIEQ 259
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
GK + K+ ++ V A +++++ + A + F VV+WN M+ G+ +
Sbjct: 260 GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
+ P+ +T +LS+C+K + + V +T+ L +
Sbjct: 320 NGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSV 379
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY 349
N L+ + G + A F +++ D++SWTS++ A+ G +
Sbjct: 380 ANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAE-------------- 425
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVKT 408
E+L +F M + ++PD+ T + +L+AC+H G ++ G K
Sbjct: 426 -----------------ESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKR 467
Query: 409 YIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM 445
+ KI + + LID+ + G +++A M
Sbjct: 468 MTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 139/327 (42%), Gaps = 12/327 (3%)
Query: 56 SLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPS 115
SLL C+ Q KQIH+ K+ D ++ +S + AR+ F+++ +
Sbjct: 250 SLLSACR-IEQGKQIHAILFKVSYQFDIPVATALLNMYA--KSNHLSDARECFESMVVRN 306
Query: 116 VFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLD 175
V WN MI G+++ + + ++ ML N++PD TF +L A+ K +
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQA 366
Query: 176 HAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXX 235
K G L V + I +S G + A F+ ++V+W ++ G
Sbjct: 367 MVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVI-GALASHGFAE 425
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEPNLVMENVLL 294
+ P+ +T + +LSACS + G ++ +TE +E L+
Sbjct: 426 ESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLI 485
Query: 295 DMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDL-----ARKYFDQMPERDY 349
D+ G G +D A V ++M T + +G N + A+K + P +
Sbjct: 486 DLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKP- 544
Query: 350 VSWTAMIDGYLRMNHFREALALFREMQ 376
V+++ + + Y+ H+ +A AL R+ +
Sbjct: 545 VNYSILSNAYVSEGHWNQA-ALLRKRE 570
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/554 (26%), Positives = 261/554 (47%), Gaps = 71/554 (12%)
Query: 67 LKQIHSKTIKMGLSSDPVFGNKVI-AFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKG 125
L+Q+H +K G S + ++ + + D AR+VFD I +PS WN +++
Sbjct: 181 LRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD---ARRVFDEIVNPSDVSWNVIVRR 237
Query: 126 YSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
Y + + M+ ML N++P + T ++ + +AL+ GKV+ AVKL + ++
Sbjct: 238 YLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVAD 297
Query: 186 LFVQKAFIHLFSLC-------------------------------GLVDLAHKIFNMGDA 214
V + ++ C GL A ++F++
Sbjct: 298 TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 215 WEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYV 274
+V+WN ML GY + ++VTLV IL+ CS ++D+ G
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA 417
Query: 275 YQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQI 334
+ ++ + N+++ N LLDM+G CG + +A
Sbjct: 418 HGFIYRHGYDTNVIVANALLDMYGKCGTLQSAN--------------------------- 450
Query: 335 DLARKYFDQMPE-RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA 393
+F QM E RD VSW A++ G R+ +AL+ F MQ+ KP ++T+ ++L
Sbjct: 451 ----IWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAG 505
Query: 394 CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIW 453
CA++ AL LG+ + ++ ++ D I A++DMY KC + A + FKE +D +W
Sbjct: 506 CANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILW 565
Query: 454 TAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTI 513
++I G NG +E +F + + PD +T++G+L AC G VE G ++F+SM+
Sbjct: 566 NSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMST 625
Query: 514 QHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAE 573
++ I P V HY CM++L + G L + + +L MP P + + AC+ ++ +L
Sbjct: 626 KYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGA 685
Query: 574 MAAKQIIE---LEP 584
AAK+++ L+P
Sbjct: 686 WAAKRLMNDHYLQP 699
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 243/483 (50%), Gaps = 15/483 (3%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGIS-----MYLLMLAHNIKPDSFT 153
G VD AR++F+ +P WN +I +C ++G+S M+ M ++ +
Sbjct: 110 GCVDDARELFEEMPERDGGSWNAVIT-----ACAQNGVSDEVFRMFRRMNRDGVRATETS 164
Query: 154 FPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGD 213
F +LK + L+ + L VK G N+ ++ + + ++ C ++ A ++F+
Sbjct: 165 FAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIV 224
Query: 214 AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY 273
V+WNV++ Y + V P + T+ ++ ACS+ L G
Sbjct: 225 NPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKV 284
Query: 274 VYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQ 333
++ + V + V+ + DM+ C +++A+ VFD +++D+ SWTS +SG+A +G
Sbjct: 285 IHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGL 344
Query: 334 IDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA 393
AR+ FD MPER+ VSW AM+ GY+ + + EAL M+ D T+V IL
Sbjct: 345 TREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNV 404
Query: 394 CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ-KDKFI 452
C+ + +++G+ +I ++ + + + +AL+DMY KCG ++ A F++M + +D+
Sbjct: 405 CSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS 464
Query: 453 WTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMT 512
W A++ G+A G E+AL+ F M + P T +L+ C + + G+ +
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFL- 522
Query: 513 IQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL-GACRVHKNVEL 571
I+ G K +V G MVD+ S+ A++V + + I+W S++ G CR ++ E+
Sbjct: 523 IRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNGRSKEV 581
Query: 572 AEM 574
E+
Sbjct: 582 FEL 584
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 178/450 (39%), Gaps = 64/450 (14%)
Query: 176 HAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXX 235
H V +F+ I + CG VD A ++F + +WN +++ +
Sbjct: 86 HLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDE 145
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLD 295
GV + +L +C + DL ++ + + N+ +E ++D
Sbjct: 146 VFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVD 205
Query: 296 MFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAM 355
++G C M A+ VFD + +SW IV
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVR----------------------------- 236
Query: 356 IDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
YL M EA+ +F +M +V+P T+ S++ AC+ ALE+G+ + K +
Sbjct: 237 --RYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSV 294
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSN 475
DT + +++ DMY KC +E AR+ F + KD WT+ + G A++G EA +F
Sbjct: 295 VADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDL 354
Query: 476 MIESSITP-------------------------------DDITYIGVLSACTHAGMVEKG 504
M E +I D++T + +L+ C+ V+ G
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG 414
Query: 505 RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL-GAC 563
++ +HG NV ++D+ + G L+ A M + + W +LL G
Sbjct: 415 KQAHG-FIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 564 RVHKNVELAEMAAKQIIELEPENGSVYVLL 593
RV ++ + +E +P ++ LL
Sbjct: 474 RVGRSEQALSFFEGMQVEAKPSKYTLATLL 503
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 127/292 (43%), Gaps = 7/292 (2%)
Query: 325 VSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
+ + G +D AR+ F++MPERD SW A+I + E +FR M V+ E
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 385 FTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKE 444
+ +L +C + L L + + K + + + ++++D+Y KC + AR+ F E
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 445 MHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG 504
+ W ++ G +EA+ MF M+E ++ P + T V+ AC+ + +E G
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Query: 505 RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACR 564
K ++ ++ + + + D+ + L+ A V + + W S +
Sbjct: 283 -KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRV-FDQTRSKDLKSWTSAMSGYA 340
Query: 565 VHKNVELAEMAAKQIIELEPENGSV-YVLLCNIYAACKRWENLREVRTIMME 615
+ A+++ +L PE V + + Y W+ + T+M +
Sbjct: 341 MSGLTR----EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ 388
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 236/461 (51%), Gaps = 47/461 (10%)
Query: 169 YGKVLLDHAVKLG-------LDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV--VT 219
Y +DH V++ L +NL + + L++ CG ++AH++F+ +
Sbjct: 103 YSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFA 162
Query: 220 WNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLT 279
WN ++SGY + GV P+ T +L AC + + G +++
Sbjct: 163 WNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHR--- 219
Query: 280 EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARK 339
+LV E FG DV ++V +A G I AR
Sbjct: 220 ------DLVKEG-----FGY-----------------DVYVLNALVVMYAKCGDIVKARN 251
Query: 340 YFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGA 399
FD +P +DYVSW +M+ GYL EAL +FR M + ++PD+ + S+L A + +
Sbjct: 252 VFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLS 308
Query: 400 LELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVG 459
+ G + ++ + + + + +ALI +Y K G + +A F +M ++D W A+I
Sbjct: 309 FKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA 368
Query: 460 LAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKP 519
+ N +G L F M ++ PD IT++ VLS C + GMVE G + F+ M+ ++GI P
Sbjct: 369 HSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDP 425
Query: 520 NVTHYGCMVDLLSRAGHLKEALDVILN-MPVKPNSIVWGSLLGACRVHKNVELAEMAAKQ 578
+ HY CMV+L RAG ++EA +I+ M ++ VWG+LL AC +H N ++ E+AA++
Sbjct: 426 KMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQR 485
Query: 579 IIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIK 619
+ ELEP+N + LL IY+ KR E++ VR +M++RG++
Sbjct: 486 LFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 210/484 (43%), Gaps = 57/484 (11%)
Query: 43 SHCDPHCFGETPISLLERCKSTYQLK---QIHSKTIKMGLSSDPVFGNKVIAFCCTQESG 99
S +P F SLLE C S + ++H L ++ +K++ + G
Sbjct: 88 SLTEPEIFA----SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYAS--CG 141
Query: 100 DVDYARQVFDTIPH--PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFL 157
+ A +VFD + S F WN++I GY+ + + +++Y M +KPD FTFP +
Sbjct: 142 YAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRV 201
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV 217
LK +++ G+ + VK G +++V A + +++ CG + A +F+M +
Sbjct: 202 LKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDY 261
Query: 218 VTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
V+WN ML+GY G+ P+ V I S +++ G ++ +
Sbjct: 262 VSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVA---ISSVLARVLSFKHGRQLHGW 318
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
+ +E L + N L+ ++ G++ A +FD M RD +SW +I+S +
Sbjct: 319 VIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---G 375
Query: 338 RKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
KYF+Q M ++ KPD T VS+L+ CA+
Sbjct: 376 LKYFEQ-------------------------------MHRANAKPDGITFVSVLSLCANT 404
Query: 398 GALELGEWVKTYIDKN-KINNDTFIGSALIDMYFKCGNVEKARKTF-KEMH-QKDKFIWT 454
G +E GE + + + K I+ + ++++Y + G +E+A +EM + +W
Sbjct: 405 GMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWG 464
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDD----ITYIGVLSACTHAGMVEKGRKFFAS 510
A++ ++G+ + + E + PD+ I + S A VE+ R+
Sbjct: 465 ALLYACYLHGNTDIGEVAAQRLFE--LEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVD 522
Query: 511 MTIQ 514
++
Sbjct: 523 RGLE 526
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 215/410 (52%), Gaps = 33/410 (8%)
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG-VSPNSVTLVLILSACSKLTDLAGGNYVY 275
+ +WN+++ ++R V P+ TL LIL ACS + G+ ++
Sbjct: 98 IFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIH 157
Query: 276 QYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQID 335
VL C ++ + +F + +++V + + G++
Sbjct: 158 ----------------VL------CLKLGFSSSLFVS---------SALVIMYVDMGKLL 186
Query: 336 LARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
ARK FD MP RD V +TAM GY++ LA+FREM S D MVS+L AC
Sbjct: 187 HARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACG 246
Query: 396 HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTA 455
LGAL+ G+ V + + +G+A+ DMY KC ++ A F M ++D W++
Sbjct: 247 QLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSS 306
Query: 456 MIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQH 515
+I+G ++G + +F M++ I P+ +T++GVLSAC H G+VEK +F M ++
Sbjct: 307 LILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EY 365
Query: 516 GIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMA 575
I P + HY + D +SRAG L+EA + +MPVKP+ V G++L C+V+ NVE+ E
Sbjct: 366 NIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERV 425
Query: 576 AKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCS 625
A+++I+L+P S YV L +Y+A R++ +R M E+ I K PGCS
Sbjct: 426 ARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 181/437 (41%), Gaps = 70/437 (16%)
Query: 106 QVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHN-IKPDSFTFPFLLKGFTND 164
VF +P+ ++F WN +I +SR I ++L M + ++PD FT P +L+ +
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 165 MALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVML 224
K G ++ +KLG S+LFV A + ++ G + A K+F+ + V + M
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 225 SGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
GY + G + +SV +V +L AC +L L G V+ +
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 285 PNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQM 344
L + N + DM+ C +D A VF NM RDVISW+S++ G+ G + ++ K FD+M
Sbjct: 268 LGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
Query: 345 PERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGE 404
+ ++P+ T + +L+ACAH G +E
Sbjct: 328 LKEG-------------------------------IEPNAVTFLGVLSACAHGGLVEKSW 356
Query: 405 WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAING 464
+ + I + +++ D + G +E+A K ++M
Sbjct: 357 LYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM------------------- 397
Query: 465 HGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN-VTH 523
+ PD+ VLS C G VE G + A IQ +KP ++
Sbjct: 398 ---------------PVKPDEAVMGAVLSGCKVYGNVEVGER-VARELIQ--LKPRKASY 439
Query: 524 YGCMVDLLSRAGHLKEA 540
Y + L S AG EA
Sbjct: 440 YVTLAGLYSAAGRFDEA 456
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 3/221 (1%)
Query: 341 FDQMPERDYVSWTAMIDGYLRMNHFREALALFREM-QMSHVKPDEFTMVSILTACAHLGA 399
F MP R+ SW +I + R +++ LF M + S V+PD+FT+ IL AC+
Sbjct: 90 FWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASRE 149
Query: 400 LELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVG 459
+ G+ + K ++ F+ SAL+ MY G + ARK F +M +D ++TAM G
Sbjct: 150 AKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGG 209
Query: 460 LAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKP 519
G L MF M S D + + +L AC G ++ G+ I+
Sbjct: 210 YVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHG-WCIRRCSCL 268
Query: 520 NVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLL 560
+ + D+ + L A V +NM + + I W SL+
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMS-RRDVISWSSLI 308
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 263/547 (48%), Gaps = 38/547 (6%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
++G ++ A +FD +P V WNTMI G + GI ++ M I+P FTF
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDS-NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAW 215
L T +++G+ + +A+ G+ NL V + + ++ G+ D A +F +
Sbjct: 142 LASLVT---CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 216 EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY 275
+VV+WN ++ + + P+ T+ +++S CS L +L+ G
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 276 QYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQID 335
+ N ++ +DMF C +D + +F R++ W S++
Sbjct: 259 ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLF-----RELEKWDSVLC--------- 304
Query: 336 LARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
+MI Y +AL LF V+PD+FT S+L++
Sbjct: 305 -----------------NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMN 347
Query: 396 HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTA 455
+ L+ G V + + K + DT + ++L++MYFK G+V+ A F + KD W
Sbjct: 348 AV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNT 406
Query: 456 MIVGLAINGHGEEALTMFSNMI-ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
+I+GLA N E+L +F+ ++ S+ PD +T +G+L AC +AG V +G + F+SM
Sbjct: 407 VIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKA 466
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEM 574
HG+ P HY C+++LL R G + EA D+ +P +P+S +W +L A + LAE
Sbjct: 467 HGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAET 526
Query: 575 AAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIY 634
AK ++E EP++ Y++L IY RWEN ++R M E +K G S + + ++
Sbjct: 527 VAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVF 586
Query: 635 EFVAGDQ 641
F A DQ
Sbjct: 587 SFEA-DQ 592
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 140/293 (47%), Gaps = 9/293 (3%)
Query: 276 QYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQID 335
Q L G V N L ++ G + A +FD++ ++ I+W + G G ++
Sbjct: 29 QLLEAGFVRTT-YWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLN 87
Query: 336 LARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT--MVSILTA 393
A FD+MPERD VSW MI G + + +F +MQ ++P EFT +++ L
Sbjct: 88 NALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVT 147
Query: 394 CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIW 453
C G G + + + + + + ++++DMY + G + A F M +D W
Sbjct: 148 CVRHGEQIHGNAICSGVSRYNL----VVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSW 203
Query: 454 TAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTI 513
+I+ + +G+ E AL F M E I PD+ T V+S C+ + KG++ A + I
Sbjct: 204 NCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALA-LCI 262
Query: 514 QHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
+ G N G +D+ S+ L +++ + + K +S++ S++G+ H
Sbjct: 263 KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWH 314
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 180/421 (42%), Gaps = 48/421 (11%)
Query: 68 KQIHSKTIKMGLSS-DPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
+QIH I G+S + V N V+ + G DYA VF T+ V WN +I
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDM--YRRLGVFDYALSVFLTMEDRDVVSWNCLI--- 207
Query: 127 SRISCPKSG-----ISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLG 181
+SC SG + + LM I+PD +T ++ ++ L GK L +K+G
Sbjct: 208 --LSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMG 265
Query: 182 LDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXX 241
SN V A I +FS C +D + K+F + W+ V N M+ Y+
Sbjct: 266 FLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFI 325
Query: 242 XXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACG 301
V P+ T +LS+ + + L G V+ + + + + + L++M+ G
Sbjct: 326 LAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTG 384
Query: 302 EMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLR 361
+D A GVF +D+I W +++ G A R
Sbjct: 385 SVDLAMGVFAKTDGKDLIFWNTVIMGLA-------------------------------R 413
Query: 362 MNHFREALALFREMQMSH-VKPDEFTMVSILTACAHLGALELGEWVKTYIDK-NKINNDT 419
+ E+LA+F ++ M+ +KPD T++ IL AC + G + G + + ++K + +N
Sbjct: 414 NSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGN 473
Query: 420 FIGSALIDMYFKCGNVEKARKTFKEM-HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
+ +I++ + G + +A+ ++ + IW ++ G A T+ M+E
Sbjct: 474 EHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLE 533
Query: 479 S 479
S
Sbjct: 534 S 534
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 39/209 (18%)
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
T+ G+ + +YFK G+V A + F ++ K+ W + GL NG+ AL +F M E
Sbjct: 39 TYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPE 98
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMT--------------------IQHG-- 516
D +++ ++S G E G + F M ++HG
Sbjct: 99 R----DVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQ 154
Query: 517 -----IKPNVTHYGCMV-----DLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
I V+ Y +V D+ R G AL V L M + + + W L+ +C
Sbjct: 155 IHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR-DVVSWNCLILSCSDS 213
Query: 567 KNVELA--EMAAKQIIELEPENGSVYVLL 593
N E+A + + +E++P+ +V +++
Sbjct: 214 GNKEVALDQFWLMREMEIQPDEYTVSMVV 242
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/539 (28%), Positives = 259/539 (48%), Gaps = 64/539 (11%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+ +H+ + G++ K++ F E G V AR+VFD +P + MI +
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYV--ECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
R + + + M +K D+F P LLK N + ++GK++ +K +S+ F
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+ + I ++S G V A K+F+ ++V +N M+SGY G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
+ P+ +T ++S S + + E + E ++E + LD +
Sbjct: 214 IKPDVITWNALISGFSHMRN-----------EEKVSE---ILELMCLDGYKP-------- 251
Query: 308 GVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFRE 367
DV+SWTSI+SG + Q + K FD
Sbjct: 252 ---------DVVSWTSIISGLVHNFQNE---KAFDA------------------------ 275
Query: 368 ALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALID 427
F++M + P+ T++++L AC L ++ G+ + Y + + F+ SAL+D
Sbjct: 276 ----FKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLD 331
Query: 428 MYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
MY KCG + +A F++ +K + +MI A +G ++A+ +F M + D +T
Sbjct: 332 MYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLT 391
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
+ +L+AC+HAG+ + G+ F M ++ I P + HY CMVDLL RAG L EA ++I M
Sbjct: 392 FTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM 451
Query: 548 PVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENL 606
++P+ VWG+LL ACR H N+ELA +AAK + ELEPEN +LL ++YA WE++
Sbjct: 452 RMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/601 (26%), Positives = 277/601 (46%), Gaps = 74/601 (12%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPF 156
+SG++ A + FD + V +N +I G SR C I +Y M++ ++ + TFP
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
+L ++++ + G + + LG N+FV+ A + L++ LVD+A K+F+
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
+ N++L + + GV+ N +T ++ CS + G ++
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 277 YLTE-GIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQI- 334
+ + G N+ + NVL+D + ACG++ + F+ + +DVISW SIVS A+ G +
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297
Query: 335 ---DLARK--YFDQMPE-RDYVSW---------------------------------TAM 355
DL K ++ + P R ++S+ +A+
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 356 IDGYLRMNHFREALALFREM-------------------------QMSHVKPDEFTMVSI 390
ID Y + N + L++ + +M + DE T +
Sbjct: 358 IDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE 417
Query: 391 LTACAHLGALELG--------EWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTF 442
+T L AL L V K+ D + +LID Y K G E +RK F
Sbjct: 418 VTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVF 477
Query: 443 KEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVE 502
E+ + F T++I G A NG G + + M M ++ PD++T + VLS C+H+G+VE
Sbjct: 478 DELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVE 537
Query: 503 KGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
+G F S+ ++GI P Y CMVDLL RAG +++A ++L + + W SLL +
Sbjct: 538 EGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQS 597
Query: 563 CRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTP 622
CR+H+N + AA+ ++ LEPEN +VY+ + Y +E R++R I R + +
Sbjct: 598 CRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREI 657
Query: 623 G 623
G
Sbjct: 658 G 658
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 181/435 (41%), Gaps = 42/435 (9%)
Query: 64 TYQLKQIHSKTIKMGLSSDPVF-GNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTM 122
Y+ KQ+HS +K G + +F N ++ + GD+ + + F+ +P V WN++
Sbjct: 229 VYEGKQLHSLVVKSGWNISNIFVANVLVDY--YSACGDLSGSMRSFNAVPEKDVISWNSI 286
Query: 123 IKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGL 182
+ + + ++ M +P F L + + ++ GK + + +K+G
Sbjct: 287 VSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF 346
Query: 183 D-SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXX 241
D S+L VQ A I ++ C ++ + ++ + N +++
Sbjct: 347 DVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFG 406
Query: 242 XXXXXGVSPNSVTLVLILSACSKL--TDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGA 299
G + VTL +L A S L V+ + ++ + L+D +
Sbjct: 407 LMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTK 466
Query: 300 CGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGY 359
G+ + ++ VFD + T ++ TSI++G+A G
Sbjct: 467 SGQNEVSRKVFDELDTPNIFCLTSIINGYARNGM-------------------------- 500
Query: 360 LRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID-KNKINND 418
+ + + REM ++ PDE T++S+L+ C+H G +E GE + ++ K I+
Sbjct: 501 -----GTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPG 555
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAMIVGLAINGHGEEALTMFSNMI 477
+ + ++D+ + G VEKA + + D W++++ I H E + + +
Sbjct: 556 RKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRI--HRNETIGRRAAEV 613
Query: 478 ESSITPDDI-TYIGV 491
++ P++ YI V
Sbjct: 614 LMNLEPENFAVYIQV 628
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 62 KSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNT 121
+S + +H IK G ++D +I +SG + +R+VFD + P++F +
Sbjct: 433 ESLHSCTLVHCCAIKSGYAADVAVSCSLID--AYTKSGQNEVSRKVFDELDTPNIFCLTS 490
Query: 122 MIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDH-AVKL 180
+I GY+R + M M N+ PD T +L G ++ ++ G+++ D K
Sbjct: 491 IINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKY 550
Query: 181 GLDSNLFVQKAFIHLFSLCGLVDLAHKIF--NMGDAWEVVTWNVML 224
G+ + + L GLV+ A ++ GDA + V W+ +L
Sbjct: 551 GISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDA-DCVAWSSLL 595
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 160/572 (27%), Positives = 265/572 (46%), Gaps = 54/572 (9%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYA-RQVFDTIPHPSVFIWNTMIKGYS 127
Q+H +K G D V N +I+ YA R+VFD + H + ++I
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISM---YAKFSRKYAVRKVFDEMLHRDTVSYCSIIN--- 121
Query: 128 RISCPKSGI---SMYLL--MLAHNIKPDSFTFPFLLK-----GFTNDMALKYGKVLLDHA 177
SC + G+ +M L+ M + P S LL G ++ +A + ++L
Sbjct: 122 --SCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVL--- 176
Query: 178 VKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXX 237
V + ++ + A + ++ A +F+ + V+W M+SG
Sbjct: 177 VDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGV 236
Query: 238 XXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMF 297
+ PN VTL+ +L AC +L NY +LV E
Sbjct: 237 DLFRAMQRENLRPNRVTLLSVLPACVEL------NY----------GSSLVKEIHGFSFR 280
Query: 298 GACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMID 357
C + F M R G + L+R F+ RD V W++MI
Sbjct: 281 HGCHADERLTAAFMTMYCR--------------CGNVSLSRVLFETSKVRDVVMWSSMIS 326
Query: 358 GYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINN 417
GY E + L +M+ ++ + T+++I++AC + L V + I K +
Sbjct: 327 GYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMS 386
Query: 418 DTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI 477
+G+ALIDMY KCG++ AR+ F E+ +KD W++MI ++GHG EAL +F MI
Sbjct: 387 HILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMI 446
Query: 478 ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL 537
+ DD+ ++ +LSAC HAG+VE+ + F H + + HY C ++LL R G +
Sbjct: 447 KGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYH-MPVTLEHYACYINLLGRFGKI 505
Query: 538 KEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA-EMAAKQIIELEPENGSVYVLLCNI 596
+A +V +NMP+KP++ +W SLL AC H +++A ++ A ++++ EP+N + YVLL I
Sbjct: 506 DDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKI 565
Query: 597 YAACKRWENLREVRTIMMERGIKKTPGCSLME 628
+ + EVR +M R + K G S +E
Sbjct: 566 HTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 118/274 (43%), Gaps = 3/274 (1%)
Query: 67 LKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
+K+IH + + G +D + C G+V +R +F+T V +W++MI GY
Sbjct: 271 VKEIHGFSFRHGCHADERLTAAFMTMYC--RCGNVSLSRVLFETSKVRDVVMWSSMISGY 328
Query: 127 SRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNL 186
+ +++ M I+ +S T ++ TN L + + +K G S++
Sbjct: 329 AETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHI 388
Query: 187 FVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX 246
+ A I +++ CG + A ++F ++V+W+ M++ Y
Sbjct: 389 LLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKG 448
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
G + + + ILSAC+ + ++ + + L +++ G G++D A
Sbjct: 449 GHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDA 508
Query: 307 KGVFDNMKTRDVIS-WTSIVSGFANTGQIDLARK 339
V NM + W+S++S G++D+A K
Sbjct: 509 FEVTINMPMKPSARIWSSLLSACETHGRLDVAGK 542
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 224 bits (570), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 241/505 (47%), Gaps = 43/505 (8%)
Query: 67 LKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
+K+IH+ +K FGN +I+ C GD+ YAR+VFD++P + W MI GY
Sbjct: 101 IKRIHAMALKCFDDQVIYFGNNLISSCV--RLGDLVYARKVFDSMPEKNTVTWTAMIDGY 158
Query: 127 SRISCPKSGISMYLLMLAHNIK-PDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+ +++ + H I+ + F LL + + G+ + + VK+G+ N
Sbjct: 159 LKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GN 217
Query: 186 LFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXX 245
L V+ + ++ ++ CG + A + F+M + +V++W ++S +R
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 246 XGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
PN T+ IL ACS+ L G V+ + + +++ ++ + L+DM+ CGE+
Sbjct: 278 HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
+ VFD M R+ ++WTSI++ A G F +
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREG--------FGE---------------------- 367
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
EA++LFR M+ H+ + T+VSIL AC +GAL LG+ + I KN I + +IGS L
Sbjct: 368 -EAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTL 426
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
+ +Y KCG A +++ +D WTAMI G + GH EAL MI+ + P+
Sbjct: 427 VWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNP 486
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
TY L AC ++ + GR + H + NV ++ + ++ G + EA V
Sbjct: 487 FTYSSALKACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFVSEAFRVFD 545
Query: 546 NMPVKPNSIVWGSLL------GACR 564
+MP K N + W +++ G CR
Sbjct: 546 SMPEK-NLVSWKAMIMGYARNGFCR 569
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 209/444 (47%), Gaps = 37/444 (8%)
Query: 55 ISLLERC--KSTYQL-KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTI 111
+ LL C ++ ++L +Q+H +K+G+ + V + V + + G++ A + FD +
Sbjct: 188 VCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYA---QCGELTSALRAFDMM 244
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK 171
V W +I SR I M++ ML H P+ FT +LK + + AL++G+
Sbjct: 245 EEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGR 304
Query: 172 VLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVX 231
+ VK + +++FV + + +++ CG + K+F+ VTW +++ + R
Sbjct: 305 QVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 232 XXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMEN 291
+ N++T+V IL AC + L G ++ + + +E N+ + +
Sbjct: 365 FGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 424
Query: 292 VLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS 351
L+ ++ CGE +RD A Q+P RD VS
Sbjct: 425 TLVWLYCKCGE------------SRD-------------------AFNVLQQLPSRDVVS 453
Query: 352 WTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID 411
WTAMI G + H EAL +EM V+P+ FT S L ACA+ +L +G + +
Sbjct: 454 WTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAK 513
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALT 471
KN ++ F+GSALI MY KCG V +A + F M +K+ W AMI+G A NG EAL
Sbjct: 514 KNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALK 573
Query: 472 MFSNMIESSITPDDITYIGVLSAC 495
+ M DD + +LS C
Sbjct: 574 LMYRMEAEGFEVDDYIFATILSTC 597
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 5/216 (2%)
Query: 53 TPISLLERCKSTYQL---KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFD 109
T +S+L C S L K++H++ IK + + G+ ++ C + G+ A V
Sbjct: 387 TVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYC--KCGESRDAFNVLQ 444
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+P V W MI G S + + M+ ++P+ FT+ LK N +L
Sbjct: 445 QLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLI 504
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
G+ + A K SN+FV A IH+++ CG V A ++F+ +V+W M+ GY R
Sbjct: 505 GRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYAR 564
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKL 265
G + ILS C +
Sbjct: 565 NGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 239/498 (47%), Gaps = 10/498 (2%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
KQ+H K GL + N +I+ + G+ A ++F + WN +I +
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLIS--AYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ P + +++ M H P+ T+ +L + L G+ + +K G ++ +
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+ A I ++ CG ++ + F+ +V WN +LSGY G
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMG 411
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
P T L +C +T+L ++ + E N + + L+ + M+ A
Sbjct: 412 FRPTEYTFSTALKSCC-VTEL---QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467
Query: 308 GVFDNMKTRDVISWTSIVSG-FANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
+ D + +IV+G ++ GQ + K + + D VSW I R ++
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 527
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN-NDTFIGSAL 425
E + LF+ M S+++PD++T VSIL+ C+ L L LG + I K + DTF+ + L
Sbjct: 528 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 587
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
IDMY KCG++ K F+E +K+ WTA+I L I+G+G+EAL F + PD
Sbjct: 588 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR 647
Query: 486 ITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
+++I +L+AC H GMV++G F M +G++P + HY C VDLL+R G+LKEA +I
Sbjct: 648 VSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIR 706
Query: 546 NMPVKPNSIVWGSLLGAC 563
MP ++ VW + L C
Sbjct: 707 EMPFPADAPVWRTFLDGC 724
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/573 (21%), Positives = 231/573 (40%), Gaps = 74/573 (12%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSR 128
Q+H ++K GL F + C ++ A QVF+ +P S+ WN M+
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCL-LCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH 192
Query: 129 ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFV 188
K + + ++ +F +LKG + L K L A K GLD + V
Sbjct: 193 RGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISV 252
Query: 189 QKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGV 248
+ I + CG +A ++F +W++V+WN ++ + G
Sbjct: 253 VNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGF 312
Query: 249 SPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKG 308
SPN T V +L S + L+ G ++ L + E +V+ N L+D + CG ++ ++
Sbjct: 313 SPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRL 372
Query: 309 VFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREA 368
FD ++ ++++ W +++SG+AN DG +
Sbjct: 373 CFDYIRDKNIVCWNALLSGYANK-------------------------DGPI-------C 400
Query: 369 LALFREMQMSHVKPDEFTMVSILTACA-------HLGALELGEWVKTYI--------DKN 413
L+LF +M +P E+T + L +C H + +G Y+ KN
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKN 460
Query: 414 KINNDTFIGSALID----------------MYFKCGNVEKARKTFKEMHQKDKFIWTAMI 457
++ ND + L+D +Y + G ++ K + Q D W I
Sbjct: 461 QLMNDALL---LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
+ + + EE + +F +M++S+I PD T++ +LS C+ + G +T
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFS 577
Query: 518 KPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAK 577
+ ++D+ + G ++ + V K N I W +L+ +H + A K
Sbjct: 578 CADTFVCNVLIDMYGKCGSIRSVMKVFEETREK-NLITWTALISCLGIHGYGQEALEKFK 636
Query: 578 QIIEL--EPENGSVYVLLCNIYAACKRWENLRE 608
+ + L +P+ V +I AC+ ++E
Sbjct: 637 ETLSLGFKPDR----VSFISILTACRHGGMVKE 665
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/542 (22%), Positives = 225/542 (41%), Gaps = 70/542 (12%)
Query: 55 ISLLERCK---STYQLKQIHSKTIKM-GLSSDPVF-GNKVIAFCCTQESGDVDYARQVFD 109
+SLL C+ S + K +H+ +I + + PV+ N +I+ ++ G+V A +VFD
Sbjct: 16 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISL--YEKLGEVSLAGKVFD 73
Query: 110 TIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+P + +NT+IKGYS+ ++ M P+ T LL + D ++
Sbjct: 74 QMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRA 131
Query: 170 GKVLLDHAVKLGL-DSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
G L ++K GL ++ FV + L+ L+++A ++F + TWN M+S
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
G S + + +L S + DL ++ T+ ++ +
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
+ N L+ +G CG A+ +F + + D++SW +I+ A + A K F MPE
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 349 YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKT 408
+ P++ T VS+L + + L G +
Sbjct: 312 F-------------------------------SPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 409 YIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEE 468
+ KN +G+ALID Y KCGN+E +R F + K+ W A++ G A N G
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPI 399
Query: 469 ALTMFSNMIESSITPDDITYIGVLSACT-------HAGMVEKG------------RKFFA 509
L++F M++ P + T+ L +C H+ +V G R +
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 510 SMTIQHGI--------KPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLG 561
+ + + +V + + SR G E++ +I + +P+++ W +
Sbjct: 460 NQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIA 518
Query: 562 AC 563
AC
Sbjct: 519 AC 520
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 223 bits (567), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 269/549 (48%), Gaps = 43/549 (7%)
Query: 119 WNTMIKGYSR---ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLD 175
W+T++ +R I ++ + + + KPD+ LL+ N + + L
Sbjct: 24 WSTIVPALARFGSIGVLRAAVEL----INDGEKPDASPLVHLLRVSGNYGYVSLCRQLHG 79
Query: 176 HAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXX 235
+ K G SN + + + + ++ AHK+F+ +V++WN ++SGY +
Sbjct: 80 YVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQE 139
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTE-GIVEPNLVMENVLL 294
V PN + L+AC++L G ++ L + G+ + N+V+ N L+
Sbjct: 140 GICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLI 199
Query: 295 DMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTA 354
DM+G CG MD A VF +M+ +D +SW +IV+ + G+++L +F QMP D V++
Sbjct: 200 DMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNE 259
Query: 355 MIDGYLRMNHFR-------------------------------EALALFREMQMSHVKPD 383
+ID +++ F EA F +M S V+ D
Sbjct: 260 LIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFD 319
Query: 384 EFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK 443
E+++ +L A A L + G + K +++ + SALIDMY KCG ++ A F
Sbjct: 320 EYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFW 379
Query: 444 EMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM-IESSITPDDITYIGVLSACTHAGM-V 501
M +K+ +W MI G A NG EA+ +F+ + E + PD T++ +L+ C+H + +
Sbjct: 380 TMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPM 439
Query: 502 EKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLG 561
E +F M ++ IKP+V H ++ + + G + +A VI + + W +LLG
Sbjct: 440 EVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLG 499
Query: 562 ACRVHKNVELAEMAAKQIIEL--EPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIK 619
AC K+++ A+ A ++IEL ++ +Y+++ N+YA +RW + ++R IM E G+
Sbjct: 500 ACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVL 559
Query: 620 KTPGCSLME 628
K G S ++
Sbjct: 560 KEVGSSWID 568
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 105/225 (46%), Gaps = 8/225 (3%)
Query: 351 SWTAMIDGYLRMNH---FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
SW+ ++ R R A+ L + + KPD +V +L + G + L +
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGE----KPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGE 467
Y+ K+ ++T + ++L+ Y ++E A K F EM D W +++ G +G +
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 468 EALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCM 527
E + +F + S + P++ ++ L+AC + G + + K NV C+
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 528 VDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA 572
+D+ + G + +A+ V +M K +++ W +++ +C + +EL
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEK-DTVSWNAIVASCSRNGKLELG 242
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 17/297 (5%)
Query: 97 ESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSG--ISMYLLMLAHNIKPDSFTF 154
+SGD + A QV +P+P+ WNT++ GY ++ KSG + M + ++ D ++
Sbjct: 266 KSGDFNNAFQVLSDMPNPNSSSWNTILTGY--VNSEKSGEATEFFTKMHSSGVRFDEYSL 323
Query: 155 PFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDA 214
+L + +G ++ A KLGLDS + V A I ++S CG++ A +F
Sbjct: 324 SIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPR 383
Query: 215 WEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG-VSPNSVTLVLILSACS----KLTDLA 269
++ WN M+SGY R + P+ T + +L+ CS + +
Sbjct: 384 KNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVML 443
Query: 270 GGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMK-TRDVISWTSIVSGF 328
G Y + E ++P++ L+ G GE+ AK V D ++W +++
Sbjct: 444 G--YFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGAC 501
Query: 329 ANTGQIDLARKYFDQMPE-----RDYVSWTAMIDGYLRMNHFREALALFREMQMSHV 380
+ + A+ +M E +D + M + Y +RE + + M+ S V
Sbjct: 502 SARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGV 558
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 194/372 (52%), Gaps = 15/372 (4%)
Query: 387 MVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH 446
++ + C L+ + V I + + D L++MY CG +A F++M
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 447 QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRK 506
+K+ W +I A NG GE+A+ MFS E PD + G+ AC G V++G
Sbjct: 317 EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL 376
Query: 507 FFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVH 566
F SM+ +GI P++ Y +V++ + G L EAL+ + MP++PN VW +L+ RVH
Sbjct: 377 HFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVH 436
Query: 567 KNVELAEMAAKQIIELEPE--NGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGC 624
N+EL + A+ + L+P N + A+ E+L++ I+ G+K +
Sbjct: 437 GNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGIL--HGVKSS--- 491
Query: 625 SLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETA 684
+ EF AGD + P++ E++ L N+ + GY +T DI +E KET
Sbjct: 492 --------MQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETL 543
Query: 685 LFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHH 744
L HSE++A A A+++S P ++KNLR+CVDCH K++S RE++ RD RFH
Sbjct: 544 LLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQ 603
Query: 745 FRHGVCSCNNFW 756
++G C+C ++W
Sbjct: 604 MKNGACTCKDYW 615
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 198/397 (49%), Gaps = 43/397 (10%)
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSA 424
+++A+ L + M PD V + +CA+L +LE + V + ++K D + +
Sbjct: 221 YKDAIELLDKGAM----PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 425 LIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPD 484
+I M+ +C ++ A++ F M KD W M+ + NG G++AL +F M + + P+
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
+ T++ V AC G +E+ F SM +HGI P HY ++ +L + GHL EA I
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYI 396
Query: 545 LNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWE 604
++P +P + W ++ R+H +++L + + +++++P +
Sbjct: 397 RDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVI--------------- 441
Query: 605 NLREVRTIMMERGIKKTPGCSLMEMNGI-----IYEFVAGDQSHPQSKEIYAKLENMMQD 659
I P S E N + I EF ++KE+ AK
Sbjct: 442 -----------NKIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAK------- 483
Query: 660 LTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDC 719
Y PDT V DI +E KE AL HSE+LAIAY +I + P T+ I+KNLR+C DC
Sbjct: 484 -KGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDC 542
Query: 720 HQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
H K++SK R L+VRD RFHHF+ G CSC ++W
Sbjct: 543 HNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 43/217 (19%)
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
G P+ VL+ +C+ L L V+ + + + + N+++ MFG C + A
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 307 KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFR 366
K VFD+M +D+ SW ++ +++ G D
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGD------------------------------- 319
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS--- 423
+AL LF EM +KP+E T +++ ACA +G +E + ++ + + N+ I
Sbjct: 320 DALHLFEEMTKHGLKPNEETFLTVFLACATVGGIE-----EAFLHFDSMKNEHGISPKTE 374
Query: 424 ---ALIDMYFKCGNVEKARKTFKEMH-QKDKFIWTAM 456
++ + KCG++ +A + +++ + W AM
Sbjct: 375 HYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 411
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 219/480 (45%), Gaps = 47/480 (9%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIA--FCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
+ H+ IK GL + ++ F C G V AR+VFD I + +W MI G
Sbjct: 235 KTHALAIKNGLFNSVFLKTSLVDMYFKC----GKVGLARRVFDEIVERDIVVWGAMIAGL 290
Query: 127 SRISCPKSGISMYLLMLAH-NIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSN 185
+ + ++ M++ I P+S +L + ALK GK + H +K S
Sbjct: 291 AHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK----SK 346
Query: 186 LFVQKAFIH-----LFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXX 240
+V++ F+H L+ CG + ++F ++W ++SGY
Sbjct: 347 NYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSI 406
Query: 241 XXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGAC 300
G P+ VT+ +L C++L + G ++ Y + + PN+ + L+ M+ C
Sbjct: 407 VWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKC 466
Query: 301 GEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYL 360
G + +FD ++ R+V + WTAMID Y+
Sbjct: 467 GVPEYPIRLFDRLEQRNVKA-------------------------------WTAMIDCYV 495
Query: 361 RMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTF 420
R + +FR M +S +PD TM +LT C+ L AL+LG+ + +I K + + F
Sbjct: 496 ENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPF 555
Query: 421 IGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS 480
+ + +I MY KCG++ A +F + K WTA+I N +A+ F M+
Sbjct: 556 VSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRG 615
Query: 481 ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA 540
TP+ T+ VLS C+ AG V++ +FF M + ++P+ HY +++LL+R G ++EA
Sbjct: 616 FTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 209/462 (45%), Gaps = 46/462 (9%)
Query: 56 SLLERC---KSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
+LLE C KS KQ+H GL S+ K++ G V A++VFD
Sbjct: 116 ALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTA--CGSVKDAQKVFDEST 173
Query: 113 HPSVFIWNTMIKGYSRISCPK---SGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
+V+ WN +++G + IS K +S + M + + ++ + K F AL+
Sbjct: 174 SSNVYSWNALLRG-TVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG--Y 227
G A+K GL +++F++ + + ++ CG V LA ++F+ ++V W M++G +
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL--TEGIVEP 285
N+ + PNSV L IL + L G V+ ++ ++ VE
Sbjct: 293 NK-RQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMP 345
V L+D++ CG+M + + VF K R+ ISWT+++SG+A G+ D A +
Sbjct: 352 PFVHSG-LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALR------ 404
Query: 346 ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEW 405
+ W MQ +PD T+ ++L CA L A++ G+
Sbjct: 405 ---SIVW----------------------MQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 406 VKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGH 465
+ Y KN + + ++L+ MY KCG E + F + Q++ WTAMI N
Sbjct: 440 IHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCD 499
Query: 466 GEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKF 507
+ +F M+ S PD +T VL+ C+ ++ G++
Sbjct: 500 LRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKEL 541
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/522 (22%), Positives = 225/522 (43%), Gaps = 69/522 (13%)
Query: 117 FIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDH 176
+I + I+ ++R + + +++ + I ++ TF LL+ +L +GK + H
Sbjct: 77 YIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVH 136
Query: 177 AVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSG--YNRVXXXX 234
GL+SN F++ +H+++ CG V A K+F+ + V +WN +L G +
Sbjct: 137 IRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQ 196
Query: 235 XXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLL 294
GV N +L + + + + L G + + + ++ ++ L+
Sbjct: 197 DVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLV 256
Query: 295 DMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTA 354
DM+ CG++ A+ VFD + RD++ W ++++G A+ + W
Sbjct: 257 DMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKR-----------------QW-- 297
Query: 355 MIDGYLRMNHFREALALFREM-QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 413
EAL LFR M + P+ + +IL + AL+LG+ V ++ K+
Sbjct: 298 ------------EALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 414 K-INNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTM 472
K F+ S LID+Y KCG++ R+ F Q++ WTA++ G A NG ++AL
Sbjct: 346 KNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRS 405
Query: 473 FSNMIESSITPDDITYIGVLSACTHAGMVEKGRK---------FFASMTIQHGI------ 517
M + PD +T VL C +++G++ F ++++ +
Sbjct: 406 IVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSK 465
Query: 518 ---------------KPNVTHYGCMVDLLSRAGHLKEALDVILNMPV---KPNSIVWGSL 559
+ NV + M+D L+ ++V M + +P+S+ G +
Sbjct: 466 CGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRV 525
Query: 560 LGACRVHKNVELAEMAAKQIIELEPENGS-VYVLLCNIYAAC 600
L C K ++L + I++ E E+ V + +Y C
Sbjct: 526 LTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKC 567
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 1/210 (0%)
Query: 99 GDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
G +Y ++FD + +V W MI Y ++GI ++ LML +PDS T +L
Sbjct: 467 GVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVL 526
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV 218
++ ALK GK L H +K +S FV I ++ CG + A+ F+ +
Sbjct: 527 TVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSL 586
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL 278
TW ++ Y G +PN+ T +LS CS+ + + +
Sbjct: 587 TWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Query: 279 TEGI-VEPNLVMENVLLDMFGACGEMDAAK 307
++P+ ++++++ CG ++ A+
Sbjct: 647 LRMYNLQPSEEHYSLVIELLNRCGRVEEAQ 676
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 202 bits (515), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 262/536 (48%), Gaps = 53/536 (9%)
Query: 103 YARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPD--SFTFPFLLKG 160
+A +FD +P + N+ + + R P ++++L + H PD S TF +L
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQI--HRASPDLSSHTFTPVLGA 93
Query: 161 FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCG-LVDLAHKIFNMGDAWEVVT 219
+ + G+ + +K G ++ + A I ++S G LVD + ++F + ++V+
Sbjct: 94 CSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVD-SVRVFESVEEKDLVS 152
Query: 220 WNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLT 279
WN +LSG+ R V + TL ++ C+ L L G V+ +
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV 212
Query: 280 EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD-VISWTSIVSGFANTGQIDLAR 338
+ RD V+ T+++S +++ G I+ A
Sbjct: 213 ---------------------------------VTGRDLVVLGTAMISFYSSVGLINEAM 239
Query: 339 KYFDQMP-ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHL 397
K ++ + D V ++I G +R +++EA L MS +P+ + S L C+
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL-----MSRQRPNVRVLSSSLAGCSDN 294
Query: 398 GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMI 457
L +G+ + +N +D+ + + L+DMY KCG + +AR F+ + K WT+MI
Sbjct: 295 SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 458 VGLAINGHGEEALTMFSNMIE--SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQH 515
A+NG G +AL +F M E S + P+ +T++ V+SAC HAG+V++G++ F M ++
Sbjct: 355 DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKY 414
Query: 516 GIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNS----IVWGSLLGACRVHKNVEL 571
+ P HY C +D+LS+AG +E ++ M N +W ++L AC ++ ++
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTR 474
Query: 572 AEMAAKQII-ELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSL 626
E A++++ E PEN S+YVL+ N YAA +W+ + E+R + +G+ KT G SL
Sbjct: 475 GEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 176/406 (43%), Gaps = 50/406 (12%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+Q+H+ IK G + + +I + G + + +VF+++ + WN ++ G+
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDM--YSKYGHLVDSVRVFESVEEKDLVSWNALLSGFL 161
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
R K + ++ M ++ FT ++K + L+ GK + V G D +
Sbjct: 162 RNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VV 220
Query: 188 VQKAFIHLFSLCGLVDLAHKIFN-MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXX 246
+ A I +S GL++ A K++N + + V N ++SG R
Sbjct: 221 LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ--- 277
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVY-QYLTEGIVEPNLVMENVLLDMFGACGEMDA 305
PN L L+ CS +DL G ++ L G V + + N L+DM+G CG++
Sbjct: 278 --RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC-NGLMDMYGKCGQIVQ 334
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A+ +F + ++ V+SWTS++ +A G DG
Sbjct: 335 ARTIFRAIPSKSVVSWTSMIDAYAVNG------------------------DGV------ 364
Query: 366 REALALFREM--QMSHVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNKINNDTFIG 422
+AL +FREM + S V P+ T + +++ACAH G ++ G E +K ++ T
Sbjct: 365 -KALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHY 423
Query: 423 SALIDMYFKCGNVEKARKTFKEMHQKDK-----FIWTAMIVGLAIN 463
ID+ K G E+ + + M + D IW A++ ++N
Sbjct: 424 VCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLN 469
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 22/298 (7%)
Query: 56 SLLERCKST---YQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIP 112
S+++ C S Q KQ+H+ + G V G +I+F G ++ A +V++++
Sbjct: 190 SVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISF--YSSVGLINEAMKVYNSLN 246
Query: 113 -HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK 171
H + N++I G R K +LLM +P+ L G +++ L GK
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEA---FLLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGK 301
Query: 172 VLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY--NR 229
+ A++ G S+ + + ++ CG + A IF + VV+W M+ Y N
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNG 361
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEPNLV 288
GV PNSVT ++++SAC+ + G + + E + P
Sbjct: 362 DGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTE 421
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTRDVIS-----WTSIVSGFANTGQIDLARKYF 341
+D+ GE + + + M D S W +++S A + +DL R +
Sbjct: 422 HYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLS--ACSLNMDLTRGEY 477
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/582 (24%), Positives = 252/582 (43%), Gaps = 89/582 (15%)
Query: 68 KQIHSKTIKMGLSSDPV-FGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGY 126
+ +H T++M + S + N VI + G A +F T H + WN+MI +
Sbjct: 413 RAVHGYTVRMEMQSRALEVINSVIDM--YGKCGLTTQAELLFKTTTHRDLVSWNSMISAF 470
Query: 127 SR-----------------ISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
S+ SC K +S L +L DS F
Sbjct: 471 SQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIF--------------- 515
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
GK + KLG ++ F+ ++ M + ++ +WN ++SG
Sbjct: 516 GKSVHCWLQKLGDLTSAFL------------------RLETMSETRDLTSWNSVISGCAS 557
Query: 230 VXXXXXXXXXXXXXXXXG-VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
G + + +TL+ +SA L + G + + + E +
Sbjct: 558 SGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQ 617
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
++N L+ M+G C ++++A K F + + +
Sbjct: 618 LQNTLITMYGRCKDIESAV-------------------------------KVFGLISDPN 646
Query: 349 YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKT 408
SW +I + RE LFR +++ +P+E T V +L+A LG+ G
Sbjct: 647 LCSWNCVISALSQNKAGREVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHC 703
Query: 409 YIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEE 468
++ + + F+ +AL+DMY CG +E K F+ W ++I +G GE+
Sbjct: 704 HLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEK 763
Query: 469 ALTMFSNMIESS-ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCM 527
A+ +F + +S + P+ ++I +LSAC+H+G +++G ++ M + G+KP H +
Sbjct: 764 AMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWI 823
Query: 528 VDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENG 587
VD+L RAG L+EA + I + + VWG+LL AC H + +L + A+ + E+EP+N
Sbjct: 824 VDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNA 883
Query: 588 SVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEM 629
S Y+ L N Y WE +R ++ + +KK PG S++++
Sbjct: 884 SYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 136/587 (23%), Positives = 238/587 (40%), Gaps = 71/587 (12%)
Query: 70 IHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRI 129
+H I+ GL D N ++ E ++ A VF + H + WNT++
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGE--NLSSAECVFTHMEHRDIVSWNTIMTKCLAN 267
Query: 130 SCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGL--DSNLF 187
P+ + + M + D+ TF ++ ++ L G+ L +K G ++++
Sbjct: 268 GHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVS 327
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYN-RVXXXXXXXXXXXXXXXX 246
V + I ++S CG + A +F +V++ N +L+G+
Sbjct: 328 VGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVD 387
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN-LVMENVLLDMFGACGEMDA 305
+ P+ T+V I S C L+ G V+ Y ++ L + N ++DM+G CG
Sbjct: 388 KIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQ 447
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS-------------- 351
A+ +F RD++SW S++S F+ G A+ F ++ S
Sbjct: 448 AELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Query: 352 --------------WTA----MIDGYLRM----------------------NHFREALAL 371
W + +LR+ H E+L
Sbjct: 508 DSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRA 567
Query: 372 FREM-QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYF 430
F+ M + ++ D T++ ++A +LG + G K+ DT + + LI MY
Sbjct: 568 FQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYG 627
Query: 431 KCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIG 490
+C ++E A K F + + W +I L+ N G E +F N+ + P++IT++G
Sbjct: 628 RCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVG 684
Query: 491 VLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK 550
+LSA T G G + + I+ G + N +VD+ S G L+ + V N V
Sbjct: 685 LLSASTQLGSTSYGMQAHCHL-IRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGV- 742
Query: 551 PNSI-VWGSLLGACRVHKNVELAEMAAKQI---IELEPENGSVYVLL 593
NSI W S++ A H E A K++ E+EP S LL
Sbjct: 743 -NSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLL 788
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 194/434 (44%), Gaps = 39/434 (8%)
Query: 68 KQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+ +H +K GL D +K++ F +G++ + +FD + V +WN+MI +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTF--YGRTGELVSSSCLFDELKEKDVIVWNSMITALN 164
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ + + +++ M+ + DS T ++ + +L A++ GL +
Sbjct: 165 QNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSS 224
Query: 188 VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
+ A ++L++ + A +F + ++V+WN +++ G
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG 284
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEP--NLVMENVLLDMFGACGEMDA 305
++VT ++SACS + +L G ++ + + P ++ + N ++ M+ CG+ +A
Sbjct: 285 QEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEA 344
Query: 306 AKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHF 365
A+ VF+ + RDVIS +I++GFA G F
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGM-------------------------------F 373
Query: 366 REALALFREMQ-MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTF-IGS 423
EA + +MQ + ++PD T+VSI + C L G V Y + ++ + + +
Sbjct: 374 EEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVIN 433
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMI-ESSIT 482
++IDMY KCG +A FK +D W +MI + NG +A +F ++ E S +
Sbjct: 434 SVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCS 493
Query: 483 PDDI-TYIGVLSAC 495
+ T + +L++C
Sbjct: 494 KFSLSTVLAILTSC 507
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 316 RDVISWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREM 375
+D+ + + +++ + TG++ + FD++ E+D + W +MI + + A+ LF EM
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 376 QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNV 435
+ D T++ +A + L + + + D+ + +AL+++Y K N+
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 436 EKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSAC 495
A F M +D W ++ NGH ++L F +M S D +T+ V+SAC
Sbjct: 240 SSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISAC 299
Query: 496 THAGMVEKGRKFFASMTIQHGIKP--NVTHYGCMVDLLSRAGHLKEALDV 543
+ + G + I+ G P +V+ ++ + S+ G + A V
Sbjct: 300 SSIEELTLGESLHG-LVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 196/403 (48%), Gaps = 20/403 (4%)
Query: 356 IDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
+D R ++A+ + + + D + I C AL+ + V +I +
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSN 475
+D +++I+MY CG+VE A F M +++ W +I A NG GE+A+ FS
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 476 MIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAG 535
+ PD + + AC G + +G F SM ++GI P + HY +V +L+ G
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPG 332
Query: 536 HLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPE--NGSVYVLL 593
+L EAL + +M +PN +W +L+ RVH ++ L + + +L+ N L
Sbjct: 333 YLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGL 390
Query: 594 CNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKL 653
+ ++ E L+ + K P GI Y AGD S P+++E+Y L
Sbjct: 391 VPVKSSDLVKEKLQR---------MAKGPNY------GIRY-MAAGDISRPENRELYMAL 434
Query: 654 ENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNL 713
+++ + + GY P + D+ +E K+ LF H+E+ A + + IR++KNL
Sbjct: 435 KSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNL 494
Query: 714 RMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
R+C DCH KL+SK REL+ RD RFHH + GVCSC +W
Sbjct: 495 RVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 191/395 (48%), Gaps = 20/395 (5%)
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
++REA+ + ++ D ++ + C ALE V I D +
Sbjct: 99 NWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARN 158
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITP 483
A+I+MY C +V+ A K F+EM + + M+ NG+GEEA+ +F+ E P
Sbjct: 159 AIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKP 218
Query: 484 DDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV 543
+ + V S CT G V++G F +M ++GI P++ HY + +L+ +GHL EAL+
Sbjct: 219 NGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNF 278
Query: 544 ILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRW 603
+ MP++P+ VW +L+ RVH +VEL + A+ + +L+ R
Sbjct: 279 VERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD----------------ATRL 322
Query: 604 ENLREVRTIMMERG--IKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLENMMQDLT 661
+ + + + +KK P S F D SHPQ IY L ++ L
Sbjct: 323 DKVSSAGLVATKASDFVKKEP--STRSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLK 380
Query: 662 NAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHQ 721
GY PDT I + + +F + E++A+ +L+ S P I ++ N+R+ DCH
Sbjct: 381 EMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHD 440
Query: 722 MAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
M KL+S R+++ RD +H F++GVC CNN W
Sbjct: 441 MMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 177 bits (448), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 198/402 (49%), Gaps = 19/402 (4%)
Query: 357 DGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN 416
D + REAL + ++ D ++ + C + ALE V I ++
Sbjct: 85 DALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCI--TPLD 142
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM 476
++ +I+MY C + + A F EM +++ W MI LA NG GE A+ MF+
Sbjct: 143 ARSY--HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRF 200
Query: 477 IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
IE PD + V AC G + +G F SM +G+ ++ Y ++++L+ GH
Sbjct: 201 IEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGH 260
Query: 537 LKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGS--VYVLLC 594
L EALD + M V+P+ +W +L+ C V +EL + A+ I +L+ S L
Sbjct: 261 LDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLV 320
Query: 595 NIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLE 654
A+ E L+E+R M R K ++EF AGD SH + + L+
Sbjct: 321 AAKASDSAMEKLKELRYCQMIRDDPKKR----------MHEFRAGDTSHLGTVSAFRSLK 370
Query: 655 NMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNLR 714
M D+ G+ P T F+ + EE+KE L S KLA A+A+I+S + +++N+R
Sbjct: 371 VQMLDI---GFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMR 427
Query: 715 MCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
C+D H K++S R L+ RDK ++H +++GVCSC ++W
Sbjct: 428 TCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 199/470 (42%), Gaps = 57/470 (12%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
PS+ ++++ GY +++ M+ +PD+ TF L+ G
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDA----WEVVTWNVMLSGYN 228
L+D V+ G NL ++ G DLA + N +A +VV +N ++
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
+ G+ PN VT ++S + + + + E + PNLV
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQM 344
N L+D F G+ A+ ++D+M R D+ ++ S+V+GF ++D A++ F+ M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 345 PER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
+ D V++ +I G+ + + LFREM +H G +
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-------------------SHRGLV 432
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAM 456
DT + LI F G+ + A+K FK+M D ++ +
Sbjct: 433 ----------------GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
+ GL NG E+AL +F M +S I D Y ++ AG V+ G F S++++ G
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-G 535
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNM----PVKPNSIVWGSLLGA 562
+KPNV Y M+ L L+EA ++ M P+ PNS + +L+ A
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRA 584
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 215/493 (43%), Gaps = 22/493 (4%)
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK 171
P PS+ +N ++ +++ IS+ M I +T+ L+ F +
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 172 VLLDHAVKLGLDSNLFVQKAFI----HLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY 227
LL +KLG + ++ + + H + V L ++ MG + +T+ ++ G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
G PN VT ++++ K D + + +E ++
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQ 343
V+ N ++D +D A +F M+T+ +V++++S++S + G+ A +
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 344 MPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA-CAHLG 398
M E+ + V++ A+ID +++ F EA L+ +M + PD FT S++ C H
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH-D 379
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWT 454
L+ + + ++ D + LI + K VE + F+EM + D +T
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
+I GL +G + A +F M+ + PD +TY +L + G +EK + F M +
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-K 498
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLLGACRVHKNVEL 571
IK ++ Y M++ + +AG + + D+ ++ VKPN + + +++ + ++
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 572 AEMAAKQIIELEP 584
A K++ E P
Sbjct: 559 AYALLKKMKEDGP 571
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/537 (21%), Positives = 221/537 (41%), Gaps = 45/537 (8%)
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS 260
++ L K+ + + T+N++++ + R G P+ VTL +L+
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 261 ACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR---- 316
++ + + E P+ + L+ + A + D M R
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALALF 372
+++++ +V+G G DLA ++M E D V + +ID + H +AL LF
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 373 REMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKC 432
+EM+ ++P+ T S+++ G + + + + KIN + +ALID + K
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 433 GNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITY 488
G +A K + +M ++ D F + +++ G ++ ++A MF M+ PD +TY
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 489 IGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM- 547
++ + VE G + F M+ G+ + Y ++ L G A V M
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 548 --PVKPNSIVWGSLL-GAC---RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACK 601
V P+ + + LL G C ++ K +E+ + K I+L+ +Y+ I CK
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD-----IYIYTTMIEGMCK 517
Query: 602 --RWENLREVRTIMMERGIKKTPGCSLMEMNGIIYE-FVAGDQSHPQSKEIYAKLENMMQ 658
+ ++ ++ + +G+K N + Y ++G S +E YA L+ M +
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKP---------NVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 659 D--LTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNL 713
D L N+G L G++ L R G TI +V N+
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV------GDASTIGLVANM 619
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 120/543 (22%), Positives = 229/543 (42%), Gaps = 65/543 (11%)
Query: 92 FCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDS 151
FC + + +D+ R V + + N ++KG S + + + L+L P+
Sbjct: 228 FCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNV 286
Query: 152 FTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM 211
TF L+ GF + L + G++ +L I + G++ + HK+F+
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 212 ----GDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTD 267
G +VV ++ + Y + G+SPN VT +++ +
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 268 LAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNM----KTRDVISWTS 323
+ +Y + + +EP++V + L+D F CG + + ++++M DV+ +
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 324 IVSGFANTG----QIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSH 379
+V G + G + + K Q + V + ++IDG+ R+N F EAL +FR M +
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 380 VKPDEFTMVSILTA-------CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKC 432
+KPD T +++ C H+ +G + + +NKI+ D + + +I + FKC
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 433 GNVEKARKTFKEM----HQKDKFIWTAMIVG----------------------------- 459
+E A K F + + D + MI G
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 460 ------LAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTI 513
L N + A+ MFS M E P+ +TY ++ + + +E K F M
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ- 704
Query: 514 QHGIKPNVTHYGCMVDLLSRAGHLKEALDVI---LNMPVKPNSIVWGSLL-GACRVHKNV 569
+ GI P++ Y ++D L + G + EA ++ ++ + P+ + + L+ G C+V + V
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 764
Query: 570 ELA 572
E A
Sbjct: 765 EAA 767
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 18/289 (6%)
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLK------GFTNDMALK 168
+V ++N++I G+ R++ + ++ LM + IKPD TF +++ F M
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN---MGDAW-EVVTWNVML 224
G L D + + +++ V IHL C ++ A K FN G ++VT+N M+
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 225 SGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
GY + PN+VTL +++ K D+ G ++ + E +
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 285 PNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKY 340
PN V L+D F +++ + +F+ M+ + ++S++ I+ G G++D A
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 341 FDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEF 385
F Q + D V++ +I GY ++ EA L+ M + VKPD+
Sbjct: 735 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 142/310 (45%), Gaps = 19/310 (6%)
Query: 275 YQYLTEGIVEPNLV-MENVLLDMFGACGE----MDAAKGVFDNMKTRDVISWTSIVSGFA 329
+ L G +EP+ V +LD GE +D + V + ++S ++ G +
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 330 NTGQIDLARKYF----DQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEF 385
QI++A + D P + V++ +I+G+ + A LF+ M+ ++PD
Sbjct: 264 -VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 386 TMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM 445
+++ G L +G + + + D + S+ ID+Y K G++ A +K M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 446 H----QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMV 501
+ +T +I GL +G EA M+ +++ + P +TY ++ G +
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 502 EKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV---ILNMPVKPNSIVWGS 558
G + M I+ G P+V YG +VD LS+ G + A+ +L ++ N +V+ S
Sbjct: 443 RSGFALYEDM-IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 559 LL-GACRVHK 567
L+ G CR+++
Sbjct: 502 LIDGWCRLNR 511
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 79/107 (73%)
Query: 650 YAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRI 709
Y KL+++ +++ +AGY P+T V DI EE KE AL HSE+LAIA+ +I++ PG TIR+
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRV 192
Query: 710 VKNLRMCVDCHQMAKLVSKAYNRELVVRDKTRFHHFRHGVCSCNNFW 756
+KNLR+C DCH K++S +RE++VRD RFHHFR G CSC ++W
Sbjct: 193 MKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 217/504 (43%), Gaps = 62/504 (12%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
P+ +N +++ +C K +++ ML+ I P FTF ++K F +
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVD----LAHKIFNMGDAWEVVTWNVMLSGYN 228
LL K G N + + IH S C V+ L ++F MG + T+N ++ G
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDL-AGGNYVYQYLTEGIVEPNL 287
+ G +P+ +T +++ K+ + A + Y+ I +P +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR-----IPKPEI 353
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTR------------------------------- 316
V+ N L+ F G +D AK V +M T
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 317 ---------DVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMN 363
+V S+T +V GF G+ID A ++M + + V + +I + + +
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
EA+ +FREM KPD +T S+++ + ++ W+ + + +T +
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 424 ALIDMYFKCGNVEKARKTFKEM----HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIES 479
LI+ + + G +++ARK EM D+ + ++I GL G ++A ++F M+
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 480 SITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKE 539
P +I+ +++ +GMVE+ +F M ++ G P++ + +++ L RAG +++
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPDIVTFNSLINGLCRAGRIED 652
Query: 540 ALDVILNMP---VKPNSIVWGSLL 560
L + + + P+++ + +L+
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 172/409 (42%), Gaps = 22/409 (5%)
Query: 46 DPHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYAR 105
D F + + L + + K ++ I+ D +G + C + G VD A+
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC---KIGRVDAAK 342
Query: 106 QVFDTIPHPSVFIWNTMIKGY---SRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFT 162
+F IP P + I+NT+I G+ R+ K+ +S ++ ++ I PD T+ L+ G+
Sbjct: 343 DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD--MVTSYGIVPDVCTYNSLIYGYW 400
Query: 163 NDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM----GDAWEVV 218
+ + +L G N++ + F G +D A+ + N G V
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ-Y 277
+N ++S + + G P+ T ++S ++ ++ ++ +
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNM----KTRDVISWTSIVSGFANTGQ 333
++EG+V N V N L++ F GE+ A+ + + M D I++ S++ G G+
Sbjct: 521 ISEGVV-ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 334 IDLARKYFDQMPERDY----VSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVS 389
+D AR F++M + +S +I+G R EA+ +EM + PD T S
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 390 ILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKA 438
++ G +E G + + I DT + L+ K G V A
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 113/287 (39%), Gaps = 22/287 (7%)
Query: 291 NVLLDMFGACGEMDAAKGVFDNMKTRDVIS----WTSIVSGFANTGQIDLARKYFDQMP- 345
VL+ GA GE + MK ++ + SI+ + G + +M
Sbjct: 115 QVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRN 174
Query: 346 ----ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALE 401
E + S+ +++ + N + A +F +M + P FT ++ A + ++
Sbjct: 175 VYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 402 LGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ----KDKFIWTAMI 457
+ + K+ ++ I LI KC V +A + +EM D + +I
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 294
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
+GL EA M + M+ PDDITY +++ G V+ + F +
Sbjct: 295 LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----- 349
Query: 518 KPNVTHYGCMVDLLSRAGHLKEALDVILNM----PVKPNSIVWGSLL 560
KP + + ++ G L +A V+ +M + P+ + SL+
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 198/470 (42%), Gaps = 57/470 (12%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
PS+ ++++ GY +++ M+ +PD+ TF L+ G
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDA----WEVVTWNVMLSGYN 228
L+D V+ G NL ++ G +DLA + N +A +VV +N ++
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
+ G+ PN VT ++S + + + + E + PNLV
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQM 344
N L+D F G+ A+ + D+M R D+ ++ S+++GF ++D A++ F+ M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 345 PERDYV----SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
+D ++ +I G+ + + LFREM +H G +
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-------------------SHRGLV 357
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAM 456
DT + LI F G+ + A+K FK+M D ++ +
Sbjct: 358 ----------------GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
+ GL NG E+AL +F M +S I D Y ++ AG V+ G F S++++ G
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-G 460
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNM----PVKPNSIVWGSLLGA 562
+KPNV Y M+ L L+EA ++ M P+ P+S + +L+ A
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRA 509
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 222/498 (44%), Gaps = 32/498 (6%)
Query: 112 PHPSVFIWNTMIKGYSRIS----CPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMAL 167
P PS+F +N ++ +++ G M L ++HN+ +T+ L+ F +
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL----YTYNILINCFCRRSQI 61
Query: 168 KYGKVLLDHAVKLGLDSNLFVQKAFI----HLFSLCGLVDLAHKIFNMGDAWEVVTWNVM 223
LL +KLG + ++ + + H + V L ++ MG + +T+ +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 224 LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIV 283
+ G G PN VT ++++ K D+ + + +
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARK 339
E ++V+ N ++D +D A +F M+T+ +V++++S++S + G+ A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 340 YFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA-C 394
M E+ + V++ A+ID +++ F EA L +M + PD FT S++ C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 395 AHLGALELGEWVKTYIDKNKINN-DTFIGSALIDMYFKCGNVEKARKTFKEMHQK----D 449
H + + + + K+ + DT+ + LI + K VE + F+EM + D
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTY--NTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 450 KFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFA 509
+T +I GL +G + A +F M+ + PD +TY +L + G +EK + F
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 510 SMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLLGACRVH 566
M + IK ++ Y M++ + +AG + + D+ ++ VKPN + + +++
Sbjct: 420 YMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 567 KNVELAEMAAKQIIELEP 584
+ ++ A K++ E P
Sbjct: 479 RLLQEAYALLKKMKEDGP 496
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/537 (21%), Positives = 222/537 (41%), Gaps = 45/537 (8%)
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS 260
++ L K+ +G + + T+N++++ + R G P+ VTL +L+
Sbjct: 29 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 88
Query: 261 ACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR---- 316
++ + + E P+ + L+ + A + D M R
Sbjct: 89 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 148
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALALF 372
+++++ +V+G G IDLA ++M E D V + +ID + H +AL LF
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 373 REMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKC 432
+EM+ ++P+ T S+++ G + + + + KIN + +ALID + K
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 433 GNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITY 488
G +A K +M ++ D F + ++I G ++ ++A MF M+ PD TY
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 489 IGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM- 547
++ + VE G + F M+ G+ + Y ++ L G A V M
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 548 --PVKPNSIVWGSLL-GAC---RVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACK 601
V P+ + + LL G C ++ K +E+ + K I+L+ +Y+ I CK
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD-----IYIYTTMIEGMCK 442
Query: 602 --RWENLREVRTIMMERGIKKTPGCSLMEMNGIIYE-FVAGDQSHPQSKEIYAKLENMMQ 658
+ ++ ++ + +G+K N + Y ++G S +E YA L+ M +
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKP---------NVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 659 D--LTNAGYSPDTSEVFLDIGEEDKETALFRHSEKLAIAYALISSGPGVTIRIVKNL 713
D L ++G L G++ L R G TI +V N+
Sbjct: 494 DGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV------GDASTIGLVANM 544
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 210/474 (44%), Gaps = 23/474 (4%)
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK 171
P PS+ ++ ++ ++++ IS+ M I + +T+ L+ F L
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 172 VLLDHAVKLGLDSNLF----VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY 227
+L +KLG + ++ + F H + V L ++ MG + T+N ++ G
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
R G P+ VT ++++ K D+ + + + +G +EP +
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQ 343
V+ N ++D ++ A +F M + +V+++ S++ N G+ A +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 344 MPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA-CAHLG 398
M ER + V+++A+ID +++ EA L+ EM + PD FT S++ C H
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWT 454
E + I K+ N + LI + K V++ + F+EM Q+ + +T
Sbjct: 377 LDEAKHMFELMISKDCFPN-VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
+I G + A +F M+ + PD +TY +L + G VE F + +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ-R 494
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLL-GACR 564
++P++ Y M++ + +AG +++ D+ ++ VKPN + + +++ G CR
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 192/469 (40%), Gaps = 55/469 (11%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
P + N+++ G+ + +S+ M+ +PDSFTF L+ G
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE----VVTWNVMLSGYN 228
L+D V G +L ++ G +DLA + + + VV +N ++
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
G+ PN VT ++ + + + + E + PN+V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQM 344
+ L+D F G++ A+ ++D M R D+ +++S+++GF ++D A+ F+ M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 345 PERD----YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
+D V++ +I G+ + E + LFREM
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS------------------------ 423
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAM 456
+ + +T + LI +F+ + A+ FK+M D ++ +
Sbjct: 424 -----------QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
+ GL NG E AL +F + S + PD TY ++ AG VE G F S++++ G
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-G 531
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK---PNSIVWGSLLGA 562
+KPNV Y M+ R G +EA + M + P+S + +L+ A
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 193/448 (43%), Gaps = 18/448 (4%)
Query: 70 IHSKTIKMGLSSDPVFGNKVI-AFCCTQESGD-VDYARQVFDTIPHPSVFIWNTMIKGYS 127
+ +K +K+G D V N ++ FC D V Q+ + P F +NT+I G
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN----DMALKYGKVLLDHAVKLGLD 183
R + +++ M+ +PD T+ ++ G D+AL K + ++ G+
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 184 SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXX 243
+ A + ++ ++L ++ N G VVT+N ++
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 244 XXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEM 303
++PN VT ++ A K L +Y + + ++P++ + L++ F +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 304 DAAKGVFDNMKTRD----VISWTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAM 355
D AK +F+ M ++D V+++ +++ GF ++D + F +M +R + V++T +
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 356 IDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
I G+ + A +F++M V PD T +L + G +E V Y+ ++K+
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALT 471
D + + +I+ K G VE F + K + +T M+ G G EEA
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAG 499
+F M E PD TY ++ A G
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 185/435 (42%), Gaps = 23/435 (5%)
Query: 184 SNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXX 243
S L A ++ F L ++ L ++ N+G + + T++++++ + R
Sbjct: 85 SKLLSAIAKMNKFDL--VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 244 XXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEM 303
G P+ VTL +L+ ++ + + E +P+ N L+
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 304 DAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAM 355
A + D M + D++++ +V+G G IDLA +M E V + +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 356 IDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
ID + +AL LF EM ++P+ T S++ + G + + + + KI
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALT 471
N + SALID + K G + +A K + EM ++ D F ++++I G ++ +EA
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
MF MI P+ +TY ++ A V++G + F M+ Q G+ N Y ++
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS-QRGLVGNTVTYTTLIHGF 441
Query: 532 SRAGHLKEALDVILNM---PVKPNSIVWGSLLGACRVHKNVELAEMAAK--QIIELEPEN 586
+A A V M V P+ + + LL + VE A + + Q ++EP+
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD- 500
Query: 587 GSVYVLLCNIYAACK 601
+Y I CK
Sbjct: 501 --IYTYNIMIEGMCK 513
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 131/315 (41%), Gaps = 16/315 (5%)
Query: 102 DYARQVFDTIP---HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
D +R + D I +P+V ++ +I + + +Y M+ +I PD FT+ L+
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF----NMGDA 214
GF L K + + + N+ I F VD ++F G
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 215 WEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYV 274
VT+ ++ G+ + GV P+ +T ++L + V
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 275 YQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFAN 330
++YL +EP++ N++++ G+++ +F ++ + +V+++T+++SGF
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 331 TGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
G + A F +M E D ++ +I +LR + L REM+ D T
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Query: 387 MVSILTACAHLGALE 401
+ ++T H G L+
Sbjct: 609 -IGLVTNMLHDGRLD 622
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/505 (22%), Positives = 220/505 (43%), Gaps = 24/505 (4%)
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG 160
VD + + P PS+ +N ++ ++++ + IS+ M I D +T+ +
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 161 FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFI----HLFSLCGLVDLAHKIFNMGDAWE 216
F L +L +KLG + ++ + + H + V L ++ MG +
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
T+ ++ G G P+ VT +++ K D+ + +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTG 332
+ +G +E ++V+ N ++D MD A +F M + DV +++S++S N G
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 333 QIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMV 388
+ A + M ER + V+++A+ID +++ EA L+ EM + PD FT
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 389 SILTA-CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ 447
S++ C H E + I K+ N S LI + K VE+ + F+EM Q
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPN-VVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 448 K----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEK 503
+ + +T +I G + A +F M+ + P+ +TY +L G + K
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Query: 504 GRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK---PNSIVWGSLL 560
F + + ++P++ Y M++ + +AG +++ ++ N+ +K PN I + +++
Sbjct: 487 AMVVFEYLQ-RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 561 -GACRVHKNVELAEMAAKQIIELEP 584
G CR + E A+ K++ E P
Sbjct: 546 SGFCR-KGSKEEADSLLKKMKEDGP 569
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 198/470 (42%), Gaps = 57/470 (12%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
P + ++++ GY +++ M+ KPD+FTF L+ G
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAW----EVVTWNVMLSGYN 228
L+D V+ G +L ++ G +DLA + + +VV +N ++ G
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
+ G+ P+ T ++S + + + + E + PN+V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQM 344
+ L+D F G++ A+ ++D M R D+ +++S+++GF ++D A+ F+ M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 345 PERD----YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
+D V+++ +I G+ + E + LFREM
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS------------------------ 425
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM----HQKDKFIWTAM 456
+ + +T + LI +F+ + + A+ FK+M + + +
Sbjct: 426 -----------QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
+ GL NG +A+ +F + S++ PD TY ++ AG VE G + F +++++ G
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-G 533
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNM----PVKPNSIVWGSLLGA 562
+ PNV Y M+ R G +EA ++ M P+ PNS + +L+ A
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRA 582
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 186/418 (44%), Gaps = 21/418 (5%)
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS 260
++ L ++ +G + ++ T+++ ++ + R G P+ VTL +L+
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 261 ACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR---- 316
++ + + E +P+ L+ + A + D M R
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALALF 372
D++++ ++V+G G IDLA +M E D V + +IDG + H +AL LF
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 373 REMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKC 432
EM ++PD FT S+++ + G + + + + KIN + SALID + K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 433 GNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITY 488
G + +A K + EM ++ D F ++++I G ++ +EA MF MI P+ +TY
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 489 IGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV---IL 545
++ A VE+G + F M+ Q G+ N Y ++ +A A V ++
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 546 NMPVKPNSIVWGSLL-GACRVHKNVELAE-MAAKQIIELEPENGSVYVLLCNIYAACK 601
++ V PN + + LL G C KN +LA+ M + ++ +Y I CK
Sbjct: 461 SVGVHPNILTYNILLDGLC---KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 135/325 (41%), Gaps = 21/325 (6%)
Query: 102 DYARQVFDTIP---HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
D +R + D I +P+V ++ +I + + +Y M+ +I PD FT+ L+
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF----NMGDA 214
GF L K + + + N+ I F V+ ++F G
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 215 WEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYV 274
VT+ ++ G+ + GV PN +T ++L K LA V
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 275 YQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFAN 330
++YL +EP++ N++++ G+++ +F N+ + +VI++ +++SGF
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 331 TGQIDLARKYFDQMPERDYV----SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
G + A +M E + ++ +I LR + L +EM+ D T
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Query: 387 MVSILTACAHLGALELGEWVKTYID 411
+ ++T H G L+ K+++D
Sbjct: 611 -IGLVTNMLHDGRLD-----KSFLD 629
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/517 (19%), Positives = 232/517 (44%), Gaps = 34/517 (6%)
Query: 88 KVIAFCCTQESGDVDYARQVFDTIP------HPSVFIWNTMIKGYSRISCPKSGISMYLL 141
+++A ++ D +YA VF ++ + + +++ ++K YSR+S +S+ L
Sbjct: 100 QILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHL 159
Query: 142 MLAHNIKPDSFTFPFLLKG-FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCG 200
AH P ++ +L + + + + + ++ + N+F I F G
Sbjct: 160 AQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAG 219
Query: 201 LVDLAHKIFN----MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLV 256
+D+A +F+ G VVT+N ++ GY ++ G+ PN ++
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 257 LILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMK-- 314
++++ + + ++V + + V N L+ G C E + + + + +
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK--GYCKEGNFHQALVMHAEML 337
Query: 315 ----TRDVISWTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFR 366
T VI++TS++ G ++ A ++ DQM R + ++T ++DG+ + +
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
EA + REM + P T +++ G +E V + + ++ D S ++
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 427 DMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSIT 482
+ + +V++A + +EM +K D ++++I G +EA ++ M+ +
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 483 PDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALD 542
PD+ TY +++A G +EK + M ++ G+ P+V Y +++ L++ +EA
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEM-VEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 543 VILNMPVK---PNSIVWGSLLGACRVHKNVELAEMAA 576
++L + + P+ + + +L+ C N+E + +
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENC---SNIEFKSVVS 610
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 226/542 (41%), Gaps = 53/542 (9%)
Query: 40 CYSSHC--DPHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQE 97
CYS+ D + +SL+++ S L Q H G + N V+ +
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAH------GFMPGVLSYNAVLD-ATIRS 182
Query: 98 SGDVDYARQVF----DTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFT 153
++ +A VF ++ P+VF +N +I+G+ ++++ M P+ T
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 154 FPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM-- 211
+ L+ G+ + G LL GL+ NL I+ LC + F +
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN--GLCREGRMKEVSFVLTE 300
Query: 212 ----GDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLV-LILSACSKLT 266
G + + VT+N ++ GY + G++P+ +T LI S C
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 267 DLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVF----DNMKTRDVISWT 322
++ Q G+ PN L+D F G M+ A V DN + V+++
Sbjct: 361 MNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 323 SIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMS 378
++++G TG+++ A + M E+ D VS++ ++ G+ R EAL + REM
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 379 HVKPDEFTMVSILTA-CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
+KPD T S++ C E + + + + + D F +ALI+ Y G++EK
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEML-RVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 438 ARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLS 493
A + EM +K D ++ +I GL EA + + P D+TY ++
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 494 ACTH---------------AGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
C++ GM+ + + F SM + KP+ T Y M+ RAG ++
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM-LGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 539 EA 540
+A
Sbjct: 658 KA 659
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 179/416 (43%), Gaps = 18/416 (4%)
Query: 220 WNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLT-DLAGGNYVYQYL 278
+++++ Y+R+ G P ++ +L A + +++ V++ +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 279 TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQI 334
E V PN+ N+L+ F G +D A +FD M+T+ +V+++ +++ G+ +I
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 335 DLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSI 390
D K M E + +S+ +I+G R +E + EM DE T ++
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 391 LTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-- 448
+ G + + ++ + ++LI K GN+ +A + +M +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 449 --DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRK 506
++ +T ++ G + G+ EA + M ++ +P +TY +++ G +E
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 507 FFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM---PVKPNSIVWGSLL-GA 562
M + G+ P+V Y ++ R+ + EAL V M +KP++I + SL+ G
Sbjct: 437 VLEDMK-EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 563 CRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGI 618
C + E ++ + + P + Y L N Y E ++ M+E+G+
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/386 (19%), Positives = 164/386 (42%), Gaps = 27/386 (6%)
Query: 119 WNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAV 178
+NT+IKGY + + M+ ML H + P T+ L+ + LD
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 179 KLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF----NMGDAWEVVTWNVMLSGYNRVXXXX 234
GL N + FS G ++ A+++ + G + VVT+N +++G+
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 235 XXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLL 294
G+SP+ V+ +LS + D+ V + + E ++P+ + + L+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 295 DMFGACGEMDAAKGVFDNMKT----RDVISWTSIVSGFANTGQIDLARKYFDQMPER--- 347
F A +++ M D ++T++++ + G ++ A + ++M E+
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 348 -DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
D V+++ +I+G + + REA L ++ P + T +++ C+++ + +
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 407 KTYIDKNKINN-----DTFIG----------SALIDMYFKCGNVEKARKTFKEMHQKDKF 451
K + K + ++ +G + +I + + G++ KA +KEM +
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 452 IWTAMIVGLAINGHGEEALTMFSNMI 477
+ T ++ L H E + +++I
Sbjct: 673 LHTVTVIALVKALHKEGKVNELNSVI 698
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 152/387 (39%), Gaps = 66/387 (17%)
Query: 78 GLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPH----PSVFIWNTMIKGYSRISCPK 133
G S V N +I C +G ++ A V + + P V ++T++ G+ R
Sbjct: 410 GFSPSVVTYNALINGHCV--TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 134 SGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFI 193
+ + M+ IKPD+ T+ L++GF K L + +++GL + F A I
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 194 HLFSLCGLVDLAHKIFN----MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVS 249
+ + + G ++ A ++ N G +VVT++V+++G N+
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
P+ VT ++ CS
Sbjct: 588 PSDVTYHTLIENCS---------------------------------------------- 601
Query: 310 FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHF 365
N++ + V+ S++ GF G + A + F+ M + D ++ MI G+ R
Sbjct: 602 --NIEFKSVV---SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 656
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
R+A L++EM S T+++++ A G + V ++ ++ ++ L
Sbjct: 657 RKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVL 716
Query: 426 IDMYFKCGNVEKARKTFKEMHQKDKFI 452
+++ + GN++ EM KD F+
Sbjct: 717 VEINHREGNMDVVLDVLAEM-AKDGFL 742
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 207/472 (43%), Gaps = 23/472 (4%)
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK 171
P PS+ ++ ++ ++++ IS+ M I + +T+ + F L
Sbjct: 71 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLAL 130
Query: 172 VLLDHAVKLGLDSNLF----VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY 227
+L +KLG ++ + F H + V L ++ MG + VT+ ++ G
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
+ G P+ VT +++ K + + + +G +E ++
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 250
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQ 343
V+ N ++D MD A +F+ M+T+ DV ++ ++S N G+ A +
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 344 MPER----DYVSWTAMIDGYLRMNHFREALALFREMQMS-HVKPDEFTMVSILTACAHLG 398
M E+ D V + A+ID +++ EA L+ EM S H PD +++
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWT 454
+E G V + + + +T + LI +F+ + + A+ FK+M D +
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
++ GL NG+ E AL +F M + + D +TY ++ A AG VE G F S++++
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM----PVKPNSIVWGSLLGA 562
G+KPNV Y M+ R G +EA + + M P+ PNS + +L+ A
Sbjct: 491 -GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRA 540
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 153/346 (44%), Gaps = 15/346 (4%)
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
P+ V +LSA +K+ + + + + NL ++ ++ F ++ A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 310 FDNMKT----RDVISWTSIVSGFANTGQIDLARKYFDQMPERDY----VSWTAMIDGYLR 361
M +++ S+++GF + +I A DQM E Y V++T ++ G +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 362 MNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFI 421
N EA+AL M + +PD T +++ G +L + ++K KI D I
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 422 GSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMI 477
+ +ID K +++ A F +M K D F + +I L G +A + S+M+
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 478 ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL 537
E +I PD + + ++ A G + + K + M P+V Y ++ + +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 538 KEALDVILNMPVK---PNSIVWGSLLGACRVHKNVELAEMAAKQII 580
+E ++V M + N++ + +L+ ++ + A+M KQ++
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 188/449 (41%), Gaps = 53/449 (11%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
PS+ ++++ GY +++ M+ +PD+ TF L+ G
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE----VVTWNVMLSGYN 228
L+D V+ G NL ++ G +DLA + N +A + VV ++ ++
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
+ GV PN +T ++S + + + + E + PN+V
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQM 344
N L+D F G++ A+ ++D M R D+ +++S+++GF ++D A+ F+ M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 345 PERD----YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
+D V++ +I+G+ + E + LFREM
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS------------------------ 427
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM----HQKDKFIWTAM 456
+ + +T + LI +F+ + + A+ FK+M + + +
Sbjct: 428 -----------QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
+ GL NG E+A+ +F + S + P TY ++ AG VE G F S++++ G
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-G 535
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVIL 545
+KP+V Y M+ R G LKE D +
Sbjct: 536 VKPDVIIYNTMISGFCRKG-LKEEADALF 563
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 207/474 (43%), Gaps = 23/474 (4%)
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK 171
P PS+F +N ++ +++ IS+ M I + +T+ L+ F +
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 172 VLLDHAVKLGLDSNLFVQKAFI----HLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY 227
LL +KLG + ++ + + H + V L ++ MG + +T+ ++ G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
G PN VT ++++ K D+ + + +E N+
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQ 343
V+ + ++D D A +F M+ + +VI+++S++S N + A +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 344 MPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA-CAHLG 398
M ER + V++ A+ID +++ EA L+ EM + PD FT S++ C H
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWT 454
E + I K+ N + LI+ + K +++ + F+EM Q+ + +T
Sbjct: 381 LDEAKHMFELMISKDCFPN-VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
+I G + A +F M+ + P+ +TY +L G +EK F + +
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-R 498
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLL-GACR 564
++P + Y M++ + +AG +++ D+ ++ VKP+ I++ +++ G CR
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 125/289 (43%), Gaps = 18/289 (6%)
Query: 113 HPSVFIWNTMIK---GYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKY 169
P+V ++++I Y R S +S M+ I P+ TF L+ F + L
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSD---MIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM---GDAW-EVVTWNVMLS 225
+ L D +K +D ++F + I+ F + +D A +F + D + VVT+N +++
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 226 GYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEP 285
G+ + G+ N+VT ++ + D V++ + V P
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTRD----VISWTSIVSGFANTGQIDLARKYF 341
N++ N LLD G+++ A VF+ ++ + ++ ++ G G+++ F
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 342 DQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
+ + D + + MI G+ R EA ALFR+M+ PD T
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 130/575 (22%), Positives = 236/575 (41%), Gaps = 80/575 (13%)
Query: 38 AKCYSSHCDPHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQE 97
A+ Y+S + +C R K+ Q ++ + K + P V+ C+
Sbjct: 382 AQAYASLIEGYC----------REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCS-- 429
Query: 98 SGDVDYA----RQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLL--MLAHNIKPDS 151
SGD+D A +++ + P+V I+ T+IK + + S + G +M +L M I PD
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS--RFGDAMRVLKEMKEQGIAPDI 487
Query: 152 FTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM 211
F + L+ G + + + L V+ GL N F AFI + A K
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 212 GDAWEVVTWNVMLSG----YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTD 267
V+ V+ +G Y + G+ ++ T ++++ K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 268 LAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMK----TRDVISWTS 323
+ +++ + + P++ VL++ F G M A +FD M T +VI +
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 324 IVSGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSH 379
++ GF +G+I+ A++ D+M + + V++ +IDGY + EA LF EM++
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 380 VKPDEFTMVSILTACAHLGALE----------------------LGEWV----KTYIDKN 413
+ PD F +++ C L +E L WV KT + K
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL-KT 786
Query: 414 KINNDTFIGS-------------ALIDMYFKCGNVEKARKTFKEMHQKD----KFIWTAM 456
++ N GS +ID K GN+E A++ F +M + +T++
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG----RKFFASMT 512
+ G G E +F I + I PD I Y +++A GM K + FA
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 513 IQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
+ G K +++ ++ ++ G ++ A V+ NM
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/494 (20%), Positives = 204/494 (41%), Gaps = 27/494 (5%)
Query: 93 CCTQESGDVDYARQVFDTIPH----PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIK 148
C + G ++ A+ +FD + P + ++I+GY R + G + + M NI
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414
Query: 149 PDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKI 208
+T+ ++KG + L ++ + G N+ + I F A ++
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 209 F----NMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK 264
G A ++ +N ++ G ++ G+ PN+ T +S +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 265 LTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVIS 320
++ A + + + E V PN V+ L++ + G++ A + +M + D +
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 321 WTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQ 376
+T +++G ++D A + F +M + D S+ +I+G+ ++ + ++A ++F EM
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
+ P+ +L G +E + + + ++ + +ID Y K G++
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 437 KARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIE---SSITPDDITYI 489
+A + F EM K D F++T ++ G E A+T+F + SS P +
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Query: 490 GVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL---KEALDVILN 546
V E + + G KPN Y M+D L + G+L KE + N
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 547 MPVKPNSIVWGSLL 560
+ P I + SLL
Sbjct: 834 ANLMPTVITYTSLL 847
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/505 (21%), Positives = 209/505 (41%), Gaps = 55/505 (10%)
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGK 171
P PS+ ++ ++ ++++ IS+ M I + +T+ L+ F L
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLAL 136
Query: 172 VLLDHAVKLGLDSNLFVQKAFI----HLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGY 227
+L +KLG + N+ + + H + V L ++F G VT+N ++ G
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 228 NRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNL 287
G P+ VT ++++ K D + + +G +EP +
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV 256
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTR------------------------------- 316
++ N ++D MD A +F M+T+
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 317 --------DVISWTSIVSGFANTGQIDLARKYFDQMPERDY----VSWTAMIDGYLRMNH 364
DV ++++++ F G++ A K +D+M +R V+++++I+G+ +
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 365 FREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSA 424
EA +F M H PD T +++ +E G V + + + +T +
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 425 LIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESS 480
LI F+ G+ + A++ FKEM + + ++ GL NG E+A+ +F + S
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 481 ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA 540
+ P TY ++ AG VE G F +++++ G+KP+V Y M+ R G +EA
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 541 LDVILNMP---VKPNSIVWGSLLGA 562
+ M PNS + +L+ A
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 173/384 (45%), Gaps = 19/384 (4%)
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS 260
++ L ++ N+G T++++++ + R G PN VTL +L+
Sbjct: 100 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN 159
Query: 261 A-CSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR--- 316
C V Q G +PN V N L+ + A + D M +
Sbjct: 160 GYCHSKRISEAVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 218
Query: 317 -DVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALAL 371
D++++ +V+G G DLA ++M E + + +IDG + H +AL L
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 372 FREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFK 431
F+EM+ ++P+ T S+++ + G + + + + KIN D F SALID + K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 432 CGNVEKARKTFKEMHQK--DKFI--WTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
G + +A K + EM ++ D I ++++I G ++ +EA MF M+ PD +T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
Y ++ VE+G + F M+ Q G+ N Y ++ L +AG A ++ M
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 548 ---PVKPNSIVWGSLL-GACRVHK 567
V PN + + +LL G C+ K
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGK 481
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/499 (19%), Positives = 202/499 (40%), Gaps = 60/499 (12%)
Query: 70 IHSKTIKMGLSSDPVFGNKVI-AFCCTQE-SGDVDYARQVFDTIPHPSVFIWNTMIKGYS 127
+ K +K+G + V + ++ +C ++ S V Q+F T P+ +NT+I G
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 128 RISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLF 187
+ +++ M+A +PD T+ ++ G
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG--------------------------- 230
Query: 188 VQKAFIHLFSLC--GLVDLAHKIFNMGDAWE----VVTWNVMLSGYNRVXXXXXXXXXXX 241
LC G DLA + N + + V+ +N ++ G +
Sbjct: 231 ----------LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 242 XXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACG 301
G+ PN VT ++S + + + + E + P++ + L+D F G
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 302 EMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQMPER----DYVSWT 353
++ A+ ++D M R +++++S+++GF ++D A++ F+ M + D V++
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 354 AMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 413
+I G+ + E + +FREM + + T ++ G ++ + + + +
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 414 KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDK-----FIWTAMIVGLAINGHGEE 468
+ + + L+D K G +EKA F E Q+ K + + MI G+ G E+
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 469 ALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMV 528
+F N+ + PD + Y ++S G E+ F M + G PN Y ++
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK-EDGTLPNSGCYNTLI 578
Query: 529 DLLSRAGHLKEALDVILNM 547
R G + + ++I M
Sbjct: 579 RARLRDGDREASAELIKEM 597
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 195/456 (42%), Gaps = 52/456 (11%)
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG 160
+D + + P PS+ +N ++ ++ IS+ M I+ D +TF ++
Sbjct: 70 IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINC 129
Query: 161 FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLF----SLCGLVDLAHKIFNMGDAWE 216
F + +L +KLG + + + ++ F + V L K+ +G +
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
+V +N ++ + G+ PN VT +++ + + +
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTG 332
+ + + PN++ + LLD F G++ AK +F+ M D+++++S+++G
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 333 QIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMV 388
+ID A + FD M + D VS+ +I+G+ + + + LFREM
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS------------ 357
Query: 389 SILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH-- 446
+ + ++T + LI +F+ G+V+KA++ F +M
Sbjct: 358 -----------------------QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 447 --QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG 504
D + + ++ GL NG E+AL +F +M + + D +TY V+ G VE+
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 505 RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA 540
F S++++ G+KP++ Y M+ L G L E
Sbjct: 455 WSLFCSLSLK-GLKPDIVTYTTMMSGLCTKGLLHEV 489
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 135/295 (45%), Gaps = 16/295 (5%)
Query: 283 VEPNLVMENVLLDMFGACGEMDAAKGVFDNM----KTRDVISWTSIVSGFANTGQIDLAR 338
+ +L N++++ F C ++ A + M D ++ S+V+GF ++ A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 339 KYFDQMPE----RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTAC 394
D+M E D V++ A+ID + +A F+E++ ++P+ T +++
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 395 AHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ----KDK 450
+ + + + K KI + SAL+D + K G V +A++ F+EM + D
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 451 FIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFAS 510
++++I GL ++ +EA MF M+ D ++Y +++ A VE G K F
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 511 MTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLLGA 562
M+ Q G+ N Y ++ +AG + +A + M + P+ + LLG
Sbjct: 356 MS-QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 115/263 (43%), Gaps = 48/263 (18%)
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALALF 372
D+ ++ +++ F Q+ LA +M E D V+ ++++G+ R N +A++L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 373 REMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKC 432
+M KPD + Y +A+ID K
Sbjct: 179 DKMVEIGYKPD----------------------IVAY-------------NAIIDSLCKT 203
Query: 433 GNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITY 488
V A FKE+ +K + +TA++ GL + +A + S+MI+ ITP+ ITY
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 489 IGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA---LDVIL 545
+L A G V + ++ F M ++ I P++ Y +++ L + EA D+++
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEM-VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 546 NMPVKPNSIVWGSLL-GACRVHK 567
+ + + + +L+ G C+ +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKR 345
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 126/584 (21%), Positives = 236/584 (40%), Gaps = 59/584 (10%)
Query: 92 FCCTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDS 151
FC + + +D+ R V + + N ++KG S + + + L+L P+
Sbjct: 228 FCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNV 286
Query: 152 FTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM 211
TF L+ GF + L + G++ +L I + G++ + HK+F+
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 212 ----GDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTD 267
G +VV ++ + Y + G+SPN VT +++ +
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 268 LAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNM----KTRDVISWTS 323
+ +Y + + +EP++V + L+D F CG + + ++++M DV+ +
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 324 IVSGFANTG----QIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSH 379
+V G + G + + K Q + V + ++IDG+ R+N F EAL +FR M +
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 380 VKPDEFTMVSILTACAHLGALE-----------------------------------LGE 404
+KPD T +++ G LE +G
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 405 WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM----HQKDKFIWTAMIVGL 460
+ + +NKI+ D + + +I + FKC +E A K F + + D + MI G
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Query: 461 AINGHGEEALTMFSNMIESSITPDDITY-IGVLSACTHAGMVEKGRKFFASMTIQHGIKP 519
+EA +F + + P+ +T I + C + M R F S+ + G KP
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF--SIMAEKGSKP 704
Query: 520 NVTHYGCMVDLLSRAGHLKEALDVILNMPVK--PNSIVWGSLL--GACRVHKNVELAEMA 575
N YGC++D S++ ++ + + M K SIV S++ G C+ + E +
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 576 AKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIK 619
+ I + Y +L Y R + M+ G+K
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 12/284 (4%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
P V + T+++ + + ++ M ++PD+ + L+ F M G L
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN---MGDAW-EVVTWNVMLSGYNR 229
D + + +++ V IHL C ++ A K FN G ++VT+N M+ GY
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
+ PN+VTL +++ K D+ G ++ + E +PN V
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQMP 345
L+D F +++ + +F+ M+ + ++S++ I+ G G++D A F Q
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 346 ER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEF 385
+ D V++ +I GY ++ EA L+ M + VKPD+
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 174/389 (44%), Gaps = 29/389 (7%)
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS 260
++ L ++ N+ ++++ ++N++++ + R G P+ VTL +L+
Sbjct: 99 VISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLN 158
Query: 261 A------CSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMK 314
S+ L +V +Y +PN V N L+ + A + D M
Sbjct: 159 GYCHGKRISEAVALVDQMFVMEY------QPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212
Query: 315 TR----DVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFR 366
R D+ ++ ++V+G G IDLA +M E D V +T +ID +
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 367 EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALI 426
+AL LF EM ++P+ T S++ + G + + + + KIN + SALI
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 427 DMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSIT 482
D + K G + +A K + EM ++ D F ++++I G ++ +EA MF MI
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 483 PDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALD 542
P+ +TY ++ A VE+G + F M+ Q G+ N Y ++ L +AG A
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 543 VILNM---PVKPNSIVWGSLL-GACRVHK 567
+ M V P+ I + LL G C+ K
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 192/470 (40%), Gaps = 57/470 (12%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
P + ++++ GY +++ M +P++ TF L+ G
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAW----EVVTWNVMLSGYN 228
L+D V G +LF ++ G +DLA + + +VV + ++
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
G+ PN VT ++ + + + + E + PN+V
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQM 344
+ L+D F G++ A+ ++D M R D+ +++S+++GF ++D A+ F+ M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 345 PERD----YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGAL 400
+D V++ +I G+ + E + LFREM
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS------------------------ 422
Query: 401 ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAM 456
+ + +T + LI F+ G+ + A+K FK+M D ++ +
Sbjct: 423 -----------QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 457 IVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHG 516
+ GL G E+AL +F + +S + PD TY ++ AG VE G F S++++ G
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-G 530
Query: 517 IKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK----PNSIVWGSLLGA 562
+KPNV Y M+ R G LKE D + + PNS + +L+ A
Sbjct: 531 VKPNVIIYTTMISGFCRKG-LKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 203/487 (41%), Gaps = 36/487 (7%)
Query: 36 ITAKCYSSHCDPHCF---GETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAF 92
I+ YS + +CF + P++L + K +K+G D V + ++
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLAL-----------AVLGKMMKLGYEPDIVTLSSLLNG 159
Query: 93 CC--TQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPD 150
C + S V Q+F P+ +NT+I G + +++ M+A +PD
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD 219
Query: 151 SFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGL------VDL 204
FT+ ++ G + LL K +++++ + I +LC ++L
Sbjct: 220 LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID--ALCNYKNVNDALNL 277
Query: 205 AHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSK 264
++ N G VVT+N ++ ++PN VT ++ A K
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Query: 265 LTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD----VIS 320
L +Y + + ++P++ + L++ F +D AK +F+ M ++D V++
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 321 WTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQ 376
+ +++ GF +++ + F +M +R + V++ +I G + A +F++M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
V PD T +L G LE V Y+ K+K+ D + + +I+ K G VE
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 437 KARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVL 492
F + K + I+T MI G G EEA +F M E P+ TY ++
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 493 SACTHAG 499
A G
Sbjct: 578 RARLRDG 584
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 95/234 (40%), Gaps = 8/234 (3%)
Query: 334 IDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA 393
+DL + P V + ++ +MN F ++L MQ + D ++ ++
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124
Query: 394 CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM----HQKD 449
L L V + K D S+L++ Y + +A +M +Q +
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 450 KFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFA 509
+ +I GL ++ EA+ + M+ PD TY V++ G ++
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 510 SMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLL 560
M + I+ +V Y ++D L ++ +AL++ M ++PN + + SL+
Sbjct: 245 KME-KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 214/496 (43%), Gaps = 53/496 (10%)
Query: 104 ARQVFDTIPH----PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLK 159
A Q+FD + PS+ +NT+I GY + P+ + M A +I+P TF LLK
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 160 GFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVT 219
G ++ + +L LG FV AF T
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLG-----FVPDAF--------------------------T 321
Query: 220 WNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVY-QYL 278
++++ GY+ GV N+ T ++L+A K + + + +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 279 TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQI 334
+G+V PN V+ N ++D + G++ A+ + M+ + D +++ ++ F G++
Sbjct: 382 AKGLV-PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 335 DLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSI 390
+ A K ++M + ++ +I GY R F + + +EM+ + P+ + ++
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 391 LTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-- 448
+ L + VK ++ ++ I + LID G +E A + KEM +K
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 449 --DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRK 506
+ + +I GL++ G EA + + + PD TY ++S AG V++
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 507 FFASMTIQHGIKPNVTHYGCMVDLLSRAG-HLKEALDVILNMPVKPNSIVWGSLLGACRV 565
+ M + GIKP + Y ++ L ++ G L E L M +KP+ +V+ +L V
Sbjct: 621 LYEEMK-RSGIKPTLKTYHLLISLCTKEGIELTERL--FGEMSLKPDLLVYNGVLHCYAV 677
Query: 566 HKNVELAEMAAKQIIE 581
H ++E A KQ+IE
Sbjct: 678 HGDMEKAFNLQKQMIE 693
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 187/440 (42%), Gaps = 57/440 (12%)
Query: 259 LSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR-- 316
+ A KL+D+ G ++ + + P++ + NVL+D M+ A+ +FD M R
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 317 --DVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALA 370
+I++ +++ G+ G + + K ++M E +++ ++ G + +A
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 371 LFREMQMSHVKPDEFTMVSIL--------TACAHLGALELGEWVKTYIDKNKINNDTFIG 422
+ +EM+ PD FT SIL A A LG E T +D + + +
Sbjct: 306 VLKEMKDLGFVPDAFTF-SILFDGYSSNEKAEAALGVYE------TAVDSG-VKMNAYTC 357
Query: 423 SALIDMYFKCGNVEKARKTF-KEMHQ---KDKFIWTAMIVGLAINGHGEEALTMFSNMIE 478
S L++ K G +EKA + +EM + ++ I+ MI G G A M +
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
+ PD + Y ++ G +E K M ++ G+ P+V Y ++ R
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-GVSPSVETYNILIGGYGRKYEFD 476
Query: 539 EALDVILNMP---VKPNSIVWGSLLGA-CRVHKNVELAEMAAKQIIELEPENGSV----- 589
+ D++ M PN + +G+L+ C+ K +E QI++ + E+ V
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE------AQIVKRDMEDRGVSPKVR 530
Query: 590 -YVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKE 648
Y +L + + + E+ M+++GI E+N + Y + S
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEMLKKGI---------ELNLVTYNTLIDGLSMTGK-- 579
Query: 649 IYAKLENMMQDLTNAGYSPD 668
++ E+++ +++ G PD
Sbjct: 580 -LSEAEDLLLEISRKGLKPD 598
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/464 (19%), Positives = 181/464 (39%), Gaps = 50/464 (10%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
PS+ +NT++KG + + ++ M PD+FTF L G++++ +
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM----GDAWEVVTWNVMLSGYN 228
+ + AV G+ N + ++ G ++ A +I G V +N M+ GY
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
R G+ P+ + ++ +L ++ + V P++
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 289 MENVLLDMFGACGEMDAA----KGVFDNMKTRDVISWTSIVS------------------ 326
N+L+ +G E D K + DN +V+S+ ++++
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 327 -----------------GFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHF 365
G + G+I+ A ++ +M ++ + V++ +IDG
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
EA L E+ +KPD FT S+++ G ++ + + ++ I L
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Query: 426 IDMYFKCGNVEKARKTFKEMHQK-DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPD 484
I + K G +E + F EM K D ++ ++ A++G E+A + MIE SI D
Sbjct: 641 ISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLD 699
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMV 528
TY ++ G + + R M + ++P Y +V
Sbjct: 700 KTTYNSLILGQLKVGKLCEVRSLIDEMNARE-MEPEADTYNIIV 742
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 194/466 (41%), Gaps = 59/466 (12%)
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCP----KSGISMYLLMLAHNIKPDSFTFPF 156
+D A + + + V + + ++R C + S+ M+ PD+ T+
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 157 LLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWE 216
+L N ++ +L + + GL ++++ + F GL++ A K FN + E
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN--EMRE 546
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
V G +PN VT ++ A K ++ N +++
Sbjct: 547 V-----------------------------GCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 277 -YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQID 335
L+EG + PN+V + L+D G+++ A +F+ M G + +D
Sbjct: 578 TMLSEGCL-PNIVTYSALIDGHCKAGQVEKACQIFERM------------CGSKDVPDVD 624
Query: 336 LARKYFDQMPER-DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTAC 394
+ K +D ER + V++ A++DG+ + + EA L M M +P++ +++
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 395 AHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DK 450
+G L+ + VKT + ++ + S+LID YFK + A K +M + +
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 451 FIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFAS 510
I+T MI GL G +EA + M E P+ +TY ++ G +E +
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 511 MTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVW 556
M G+ PN Y ++D + G ALDV N+ + W
Sbjct: 805 MG-SKGVAPNYVTYRVLIDHCCKNG----ALDVAHNLLEEMKQTHW 845
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 134/350 (38%), Gaps = 60/350 (17%)
Query: 330 NTGQIDLARKYFDQMPERDYVSWTAMIDGYLR----MNHFREALALFREMQMSHVKPDEF 385
N +DLA K + +M V + + R + +A ++ REM PD
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 386 TMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM 445
T +L + +EL + + + + D + + ++D + K G +E+ARK
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK----- 539
Query: 446 HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGR 505
W F+ M E TP+ +TY ++ A A V
Sbjct: 540 -------W-------------------FNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573
Query: 506 KFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM------------------ 547
+ F +M + G PN+ Y ++D +AG +++A + M
Sbjct: 574 ELFETM-LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDD 632
Query: 548 -PVKPNSIVWGSLL-GACRVHKNVELAEMAAKQIIELEPENGSVYVLLCNIYAACKRWEN 605
+PN + +G+LL G C+ H+ E ++ +E N VY L + + +
Sbjct: 633 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 692
Query: 606 LREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLEN 655
+EV+T M E G T L + +I + + SK + LEN
Sbjct: 693 AQEVKTEMSEHGFPAT----LYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/534 (20%), Positives = 231/534 (43%), Gaps = 26/534 (4%)
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG 160
VD + + P PS+ +N ++ ++++ + IS+ M I D +T+ +
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 161 FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFI----HLFSLCGLVDLAHKIFNMGDAWE 216
F L +L +KLG + ++ + + H + V L ++ MG +
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
T+ ++ G G P+ VT +++ K D+ +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTG 332
+ ++ N+V+ N ++D ++ A +F M+T+ +V+++ S+++ N G
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 333 QIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMV 388
+ A + M E+ + V++ A+ID + + EA L EM + PD T
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 389 SILTA-CAHLGALELGEWVKTYIDKNKINN-DTFIGSALIDMYFKCGNVEKARKTFKEMH 446
++ C H E + K + K+ + N T+ + LI+ + KC VE + F+EM
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY--NTLINGFCKCKRVEDGVELFREMS 425
Query: 447 QK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVE 502
Q+ + +T +I G G + A +F M+ + + D +TY +L G ++
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 503 KGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGA 562
F + + ++ N+ Y M++ + +AG + EA D+ ++ +KP+ + + +++
Sbjct: 486 TALVIFKYLQ-KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Query: 563 CRVHKNVELAEMAAKQIIE--LEPENGSVYVLLCNIYAACKR---WENLREVRT 611
+ ++ A+ +++ E P +G+ L+ C R E ++E+R+
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 155/351 (44%), Gaps = 19/351 (5%)
Query: 285 PNLVMENVLLDMFGACGEMDAAKGVFDNMKT----RDVISWTSIVSGFANTGQIDLARKY 340
P++V N LL + + + + M+T D+ +++ ++ F Q+ LA
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 341 FDQMP----ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTAC-A 395
+M E D V+ +++++GY +A+AL +M KPD FT +++
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 396 HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH----QKDKF 451
H A E V + + D +++ K G+++ A +M + +
Sbjct: 201 HNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 452 IWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASM 511
I+ +I L H E A+ +F+ M I P+ +TY +++ + G + ++M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 512 TIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV---ILNMPVKPNSIVWGSLLGACRVHKN 568
++ I PNV + ++D + G L EA + ++ + P++I + L+ +H
Sbjct: 320 -LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 569 VELAEMAAKQIIELE-PENGSVYVLLCNIYAACKRWENLREVRTIMMERGI 618
++ A+ K ++ + N Y L N + CKR E+ E+ M +RG+
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 206/486 (42%), Gaps = 27/486 (5%)
Query: 99 GDVDYARQVFDTIPH----PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTF 154
G VD +QV+ + P+++ +N M+ GY ++ + ++ + PD FT+
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTY 256
Query: 155 PFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF-NMGD 213
L+ G+ L + + G N IH + +D A +F M D
Sbjct: 257 TSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 214 AW---EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTL-VLILSACSKLTDLA 269
V T+ V++ G+ PN T VLI S CS+
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 270 GGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIV 325
+ Q L +G++ PN++ N L++ + G ++ A V + M++R + ++ ++
Sbjct: 377 ARELLGQMLEKGLM-PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 326 SGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVK 381
G+ + + A ++M ER D V++ ++IDG R +F A L M +
Sbjct: 436 KGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 382 PDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKT 441
PD++T S++ + +E + +++ +N + + +ALID Y K G V++A
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 442 FKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTH 497
++M K + + A+I GL +G +EA + M++ + P T ++
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 498 AGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VKPNSI 554
G + F M + G KP+ Y + R G L +A D++ M V P+
Sbjct: 615 DGDFDHAYSRFQQM-LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 555 VWGSLL 560
+ SL+
Sbjct: 674 TYSSLI 679
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/464 (19%), Positives = 179/464 (38%), Gaps = 62/464 (13%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
P+V +N +I GY + + + + LM + + P++ T+ L+KG+ K VL
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXX 233
+K+ +VVT+N ++ G R
Sbjct: 451 --------------------------------NKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 234 XXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVL 293
G+ P+ T ++ + K + ++ L + V PN+VM L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 294 LDMFGACGEMDAAKGVFDNMKTRDVI----SWTSIVSGFANTGQIDLARKYFDQMPE--- 346
+D + G++D A + + M +++ + ++ +++ G G++ A ++M +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 347 RDYVSW-TAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEW 405
+ VS T +I L+ F A + F++M S KPD T + + G L E
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 406 VKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH----QKDKFIWTAMIVGLA 461
+ + +N ++ D F S+LI Y G A K M + + + ++I L
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
Query: 462 INGHGEE------------------ALTMFSNMIESSITPDDITYIGVLSACTHAGMVEK 503
+G++ + + M+E S+TP+ +Y ++ G +
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778
Query: 504 GRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
K F M GI P+ + ++ + EA V+ +M
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/451 (18%), Positives = 173/451 (38%), Gaps = 36/451 (7%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
P V +N++I G R S + LM + PD +T+ ++ ++ L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAH----KIFNMGDAWEVVTWNVMLSGYNR 229
D + G++ N+ + A I + G VD AH K+ + +T+N ++ G
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
G+ P T +++ K D +Q + +P+
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMK----TRDVISWTSIVSGFANTGQ----IDLARKYF 341
+ + G + A+ + M+ + D+ +++S++ G+ + GQ D+ ++
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 342 DQMPERDYVSWTAMIDGYLRMNH------------------FREALALFREMQMSHVKPD 383
D E ++ ++I L M + F + L +M V P+
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759
Query: 384 EFTMVSILTACAHLGALELGEWVKTYIDKNK-INNDTFIGSALIDMYFKCGNVEKARKTF 442
+ ++ +G L + E V ++ +N+ I+ + +AL+ K +A K
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Query: 443 KEM----HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHA 498
+M H +I GL G E ++F N+++ D++ + ++
Sbjct: 820 DDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQ 879
Query: 499 GMVEKGRKFFASMTIQHGIKPNVTHYGCMVD 529
G+VE + F M ++G K + Y +++
Sbjct: 880 GLVEAFYELFNVME-KNGCKFSSQTYSLLIE 909
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/466 (19%), Positives = 200/466 (42%), Gaps = 17/466 (3%)
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG 160
VD R + + P P+V +N + ++ + +++ M + I +T ++
Sbjct: 73 VDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINC 132
Query: 161 FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSL-CGL---VDLAHKIFNMGDAWE 216
F L Y + +KLG + + + ++ L C + ++L ++ MG
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 217 VVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQ 276
++T N +++G G PN VT +L+ K A + +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 277 YLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTG 332
+ E ++ + V ++++D G +D A +F+ M+ + D+I++ +++ GF N G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 333 QIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMV 388
+ D K M +R + V+++ +ID +++ REA L +EM + P+ T
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372
Query: 389 SILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK 448
S++ LE + + + D + LI+ Y K ++ + F+EM +
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 449 ----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG 504
+ + ++ G +G E A +F M+ + PD ++Y +L G +EK
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 505 RKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK 550
+ F + + ++ ++ Y ++ + A + +A D+ ++P+K
Sbjct: 493 LEIFGKIE-KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/512 (20%), Positives = 217/512 (42%), Gaps = 55/512 (10%)
Query: 204 LAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
L ++ + G A + T ++M++ + R G P++V +L+
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 264 KLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVI 319
++ + + E +P L+ N L++ G++ A + D M + +
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 320 SWTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREM 375
++ +++ +GQ LA + +M ER D V ++ +IDG + A LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 376 QMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNV 435
++ K D T +++ + G + G + + K KI+ + S LID + K G +
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 436 EKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGV 491
+A + KEM Q+ + + ++I G EEA+ M MI PD +T+ +
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 492 LSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL---KEALDVILNMP 548
++ A ++ G + F M+++ G+ N Y +V ++G L K+ +++
Sbjct: 410 INGYCKANRIDDGLELFREMSLR-GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 549 VKPNSIVWGSLL-GAC---RVHKNVELAEMAAKQIIELEPENGSVYVL----LCNIYAAC 600
V+P+ + + LL G C + K +E+ K +EL+ +Y++ +CN
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI---GIYMIIIHGMCNASKVD 525
Query: 601 KRWENLREVRTIMMERGIKKTPGCSL----MEMNGIIYEFVAGDQSHPQSKEIYAKLENM 656
W+ CSL ++++ Y + + S +K + +
Sbjct: 526 DAWDLF-----------------CSLPLKGVKLDARAYNIMISELCRKDS---LSKADIL 565
Query: 657 MQDLTNAGYSPD--TSEVFLD--IGEEDKETA 684
+ +T G++PD T + + +G++D TA
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTA 597
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 165/401 (41%), Gaps = 45/401 (11%)
Query: 30 ITNAPAITAKCYSSHCDPHCFGETPISLLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKV 89
+T P + C S G+T +++ L+++ + IK+ D V + +
Sbjct: 229 VTYGPVLNVMCKS--------GQTALAM-------ELLRKMEERNIKL----DAVKYSII 269
Query: 90 IAFCCTQESGDVDYARQVFDTIP----HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAH 145
I C + G +D A +F+ + + +NT+I G+ G + M+
Sbjct: 270 IDGLC--KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 146 NIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLF----SLCGL 201
I P+ TF L+ F + L+ LL ++ G+ N + I F L
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 202 VDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSA 261
+ + + + G +++T+N++++GY + GV N+VT ++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 262 CSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----D 317
+ L ++Q + V P++V +LLD GE++ A +F ++ D
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 318 VISWTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFR 373
+ + I+ G N ++D A F +P + D ++ MI R + +A LFR
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Query: 374 EMQMSHVKPDEFTMVSILTACAHLG------ALELGEWVKT 408
+M PDE T ++ AHLG A EL E +K+
Sbjct: 568 KMTEEGHAPDELTYNILIR--AHLGDDDATTAAELIEEMKS 606
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 123/544 (22%), Positives = 228/544 (41%), Gaps = 46/544 (8%)
Query: 91 AFCCTQESGD-VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKP 149
C E G V R++ P VF +NT+I+G+ C + L LA+ +K
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGF----CEGKELEKA-LELANEMKG 205
Query: 150 DSFTFPFLLKGFTNDMALKYGKV-----LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDL 204
++ + G D K GK+ L +GL+++L V + I F CG +D
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 205 AHKIFN----MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS 260
+F+ GD+ +T+N ++ G+ ++ GV PN T ++
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 261 ACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR---- 316
+ + + E EPN V N++++ G + A + + MK R
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQM------PERDYVSWTAMIDGYLRMNHFREALA 370
D I++ ++ G G +D A K M + D +S+ A+I G + N +AL
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 371 LFREMQMSHVKPDEFTMVSILTACAHLG----ALELGEWVKTYIDKNKINNDTFIGSALI 426
++ + D T +L + G A+EL W + K N+DT+ +A+I
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL--WKQISDSKIVRNSDTY--TAMI 501
Query: 427 DMYFKCGNVEKARKTFKEMH----QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSIT 482
D + K G + A+ +M Q F + ++ L G ++A +F M +
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561
Query: 483 PDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEAL- 541
PD +++ ++ AG ++ M+ + G+ P++ Y +++ + G+L EA+
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMS-RAGLSPDLFTYSKLINRFLKLGYLDEAIS 620
Query: 542 --DVILNMPVKPNSIVWGSLLGAC----RVHKNVELAEMAAKQIIELEPE-NGSVYVLLC 594
D +++ +P++ + S+L C K EL + + I L+ E +V +C
Sbjct: 621 FFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Query: 595 NIYA 598
N A
Sbjct: 681 NSSA 684
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 189/450 (42%), Gaps = 61/450 (13%)
Query: 77 MGLSSDPVFGNKVI-AFCCTQESGDVDYARQVFDTI----PHPSVFIWNTMIKGYSRISC 131
MGL +D V +I FC + G++D + +FD + P +NT+I+G+ ++
Sbjct: 241 MGLEADLVVYTSLIRGFC---DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 132 PKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKA 191
K ++ M+ ++P+ +T+ L+ G K LL+ ++ + N
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 192 FIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPN 251
I+ GLV DA E+V +M R P+
Sbjct: 358 IINKLCKDGLV---------ADAVEIV--ELMKKRRTR--------------------PD 386
Query: 252 SVTLVLILSACSKLTDL-AGGNYVYQYLTEG-IVEPNLVMENVLLDMFGACGE------M 303
++T ++L DL +Y L + +P+++ N L+ G C E +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI--HGLCKENRLHQAL 444
Query: 304 DAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE----RDYVSWTAMIDGY 359
D + + + D ++ +++ G ++ A + + Q+ + R+ ++TAMIDG+
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 360 LRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINN-- 417
+ A L +M++S ++P F +L++ G+L+ W + + + + NN
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA-W-RLFEEMQRDNNFP 562
Query: 418 DTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMF 473
D + +ID K G+++ A M + D F ++ +I G+ +EA++ F
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Query: 474 SNMIESSITPDDITYIGVLSACTHAGMVEK 503
M++S PD VL C G +K
Sbjct: 623 DKMVDSGFEPDAHICDSVLKYCISQGETDK 652
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 144/317 (45%), Gaps = 26/317 (8%)
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTR------DVISWTSIVSGFANTGQIDLARK 339
N+ N+LL G C ++ K V + R DV S+ +++ GF +++ A +
Sbjct: 141 NVYNHNILLK--GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALE 198
Query: 340 YFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
++M V+W +ID + + EA+ +EM+ ++ D S++
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 396 HLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKF 451
G L+ G+ + + + + + LI + K G +++A + F+ M ++ + +
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 452 IWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASM 511
+T +I GL G +EAL + + MIE P+ +TY +++ G+V + M
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 512 TIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP-----VKPNSIVWGSLL-GAC-- 563
+ +P+ Y ++ L G L EA ++ M P+ I + +L+ G C
Sbjct: 379 K-KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 564 -RVHKNVELAEMAAKQI 579
R+H+ +++ ++ +++
Sbjct: 438 NRLHQALDIYDLLVEKL 454
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/521 (21%), Positives = 219/521 (42%), Gaps = 61/521 (11%)
Query: 99 GDVDYARQVFDTIPH----PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTF 154
GD+ AR+ F+ + P+ I+ ++I Y+ +S M I+ T+
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 155 PFLLKGFTN-----------DMALK---------YGKVLLDHAV---------------K 179
++ GF+ D A + YGK++ H +
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 180 LGLDSNLFVQKAFIHLFSLC-----GLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXX 234
G+D+ + + + +++ GLV + ++ G VVT+ +++ Y +V
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLV-VFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501
Query: 235 XXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLL 294
GV N T ++++ KL D A V++ + + ++P++++ N ++
Sbjct: 502 KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 295 DMFGACGEMDAA-KGVFDNMKTR---DVISWTSIVSGFANTGQIDLARKYFDQMPERDYV 350
F G MD A + V + K R ++ I+ G+A +G + + + FD M V
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 351 ----SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
++ +I+G + +A+ + EM ++ V +E T I+ A +G
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKD----KFIWTAMIVGLAI 462
T + ++ D F AL+ K G ++ A KEM ++ F++ +I G A
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 463 NGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVT 522
G EA + M + + PD TY +SAC+ AG + + + M G+KPN+
Sbjct: 742 RGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL-GVKPNIK 800
Query: 523 HYGCMVDLLSRAGHLKEAL---DVILNMPVKPNSIVWGSLL 560
Y ++ +RA ++AL + + M +KP+ V+ LL
Sbjct: 801 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 182/466 (39%), Gaps = 48/466 (10%)
Query: 84 VFGNKVIAFC--CTQESGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLL 141
++G + A C C E + + I P + I++TM+ GY+ ++ K G+ ++
Sbjct: 416 IYGKIIYAHCQTCNMERAEALVREMEEEGIDAP-IAIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 142 MLAHNIKPDSFTFPFLLKGFTN----DMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFS 197
+ P T+ L+ +T AL+ +V+ + VK L + + F+ L
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 198 LCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVL 257
+ + G +V+ +N ++S + + P + T +
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 258 ILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD 317
I+ +K D+ V+ DM CG +
Sbjct: 595 IIHGYAKSGDMRRSLEVF-------------------DMMRRCGCVPT------------ 623
Query: 318 VISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALALFR 373
V ++ +++G Q++ A + D+M + ++T ++ GY + +A F
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 683
Query: 374 EMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCG 433
+Q + D FT ++L AC G ++ V + I ++F+ + LID + + G
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 434 NVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYI 489
+V +A ++M ++ D +T+ I + G A M + P+ TY
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 803
Query: 490 GVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMV-DLLSRA 534
++ A + EK + M GIKP+ Y C++ LLSRA
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAM-GIKPDKAVYHCLLTSLLSRA 848
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 158/397 (39%), Gaps = 48/397 (12%)
Query: 280 EGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARK 339
E I +P+ +++ +G G+M A+ F+ M+ R G T +I
Sbjct: 302 EKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRAR----------GITPTSRI----- 346
Query: 340 YFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGA 399
+T++I Y EAL+ R+M+ ++ T I+ + G
Sbjct: 347 ------------YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 400 LELGE-WVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDK----FIWT 454
E + W +K N + G +I + + N+E+A +EM ++ I+
Sbjct: 395 AEAADYWFDEAKRIHKTLNASIYGK-IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYH 453
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
M+ G + ++ L +F + E TP +TY +++ T G + K + M +
Sbjct: 454 TMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK-E 512
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM---PVKPNSIVWGSLLGACRVHKNVEL 571
G+K N+ Y M++ + A V +M +KP+ I++ +++ A N++
Sbjct: 513 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 572
Query: 572 AEMAAKQIIELEPENGSVYVLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLMEMNG 631
A K++ +L + + I+ K + R + M R P ++ NG
Sbjct: 573 AIQTVKEMQKLR-HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP--TVHTFNG 629
Query: 632 IIYEFVAGDQSHPQSKEIYAKLENMMQDLTNAGYSPD 668
+I V Q K ++ ++T AG S +
Sbjct: 630 LINGLVEKRQ--------MEKAVEILDEMTLAGVSAN 658
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 147/330 (44%), Gaps = 17/330 (5%)
Query: 250 PNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGV 309
P+ +LSA SK+ Y+++ + + NL N+LL+ F C ++ A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 310 FDNM----KTRDVISWTSIVSGFANTGQIDLARKYFDQMPERDY----VSWTAMIDGYLR 361
M ++++ S+++GF ++ A FDQM Y V + +IDG +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 362 MNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFI 421
AL L M+ + PD T S+++ G + + + K +I D F
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 422 GSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMI 477
+ALID K G V +A + ++EM ++ D ++ +I GL + +EA MF M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 478 ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL 537
PD +TY +++ + VE G K F M+ Q G+ N Y ++ RAG L
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS-QRGVVRNTVTYTILIQGYCRAGKL 377
Query: 538 KEALDVILNM---PVKPNSIVWGSLL-GAC 563
A ++ M V PN I + LL G C
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 171/395 (43%), Gaps = 25/395 (6%)
Query: 111 IPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYG 170
IPH ++ N ++ + R S +S M+ +P TF LL GF +
Sbjct: 112 IPH-NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIHLFSLC------GLVDLAHKIFNMGDAWEVVTWNVML 224
+ D V +G N+ + I LC +DL +++ G +VVT+N ++
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIID--GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 225 SGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
SG + P+ T ++ AC K ++ Y+ + ++
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 285 PNLVMENVLLDMFGAC--GEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLAR 338
P++V ++L+ +G C +D A+ +F M ++ DV++++ +++G+ + +++
Sbjct: 289 PDIVTYSLLI--YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 339 KYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTAC 394
K F +M +R + V++T +I GY R A +FR M V P+ T +L
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 395 AHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DK 450
G +E + + KN ++ D + +I K G V A + ++ + D
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 451 FIWTAMIVGLAINGHGEEALTMFSNMIESSITPDD 485
+ +T M++GL G EA +F M E I P++
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/438 (20%), Positives = 172/438 (39%), Gaps = 17/438 (3%)
Query: 119 WNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAV 178
+ M++ R + ++ M+ P F LL + L +
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 179 KLGLDSNLFVQKAFIHLFSLCGLVDLA----HKIFNMGDAWEVVTWNVMLSGYNRVXXXX 234
LG+ NL ++ F C + LA K+ +G +VT+ +L+G+ R
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 235 XXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLL 294
G PN V I+ K + + + + + P++V N L+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 295 DMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQMPER--- 347
+ G A + M R DV ++ +++ G++ A +++++M R
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 348 -DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
D V+++ +I G + EA +F M PD T ++ +E G +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH----QKDKFIWTAMIVGLAI 462
+ + + +T + LI Y + G + A + F+ M + + ++ GL
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 463 NGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVT 522
NG E+AL + ++M ++ + D +TY ++ AG V + S+ Q G+ P++
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ-GLMPDIW 467
Query: 523 HYGCMVDLLSRAGHLKEA 540
Y M+ L + G +EA
Sbjct: 468 TYTTMMLGLYKKGLRREA 485
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 192/488 (39%), Gaps = 78/488 (15%)
Query: 78 GLSSDPVFGNKVIAFCCTQE--SGDVDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSG 135
G++ D + +I CC Q S D ++ T P + I+N + G + +
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 136 ISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL---------------------- 173
+M +KP T +++G + L +
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAA 545
Query: 174 --LDHAVKLGLDSNLFVQKA--FIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
LDHA + + + K+ F SLC D K ++ D W +
Sbjct: 546 GCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDR----MWKL------- 594
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
GV P ++ A ++ ++ ++ L + P+L
Sbjct: 595 -----------------GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFT 637
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTG-QIDLARKY--FDQMPE 346
++++ + E A +F++MK RDV S N+ ++D+ R+ FD +P
Sbjct: 638 YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIP- 696
Query: 347 RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWV 406
D V +T MI+ Y +N ++ ALF++M+ + PD T +L + L +
Sbjct: 697 -DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK---NKPERNLSREM 752
Query: 407 KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAI 462
K + + D F + LID K G++ +A++ F +M + D +TA+I
Sbjct: 753 KAF----DVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 463 NGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKP--- 519
G+ +EA +F MIES + PD + Y +++ C G V K K M ++ GIKP
Sbjct: 809 MGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEM-LEKGIKPTKA 867
Query: 520 --NVTHYG 525
+ HY
Sbjct: 868 SLSAVHYA 875
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 109/572 (19%), Positives = 216/572 (37%), Gaps = 105/572 (18%)
Query: 137 SMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLF 196
S+ L M H I PD + + +++G +M + + + +K N + + + +
Sbjct: 312 SVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCY 371
Query: 197 SLCGLVDLAHKIFN----MGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNS 252
G A+ +F + + V +NV ++ G++P+
Sbjct: 372 CQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDV 431
Query: 253 VTLVLILSAC---SKLTD----------------------LAGG---NYVYQYLTEGI-- 282
+ ++ C K +D LAGG N + Q E +
Sbjct: 432 INYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKM 491
Query: 283 -----VEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLA 337
V+P V N++++ GE+D A+ +++++ + + S+V GF G +D A
Sbjct: 492 MENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHA 551
Query: 338 RKYFDQM-----------------PERDYVS--------------------WTAMIDGYL 360
+ F ++ E+DY+S + +I +
Sbjct: 552 FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWC 611
Query: 361 RMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTF 420
R+N+ R+A F + + PD FT ++ L + + + + + D
Sbjct: 612 RVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVV 671
Query: 421 IGSALIDMYFKCGNVEKARKTFKEMHQ----KDKFIWTAMIVGLAINGHGEEALTMFSNM 476
S L+ N + +EM D +T MI ++ +F +M
Sbjct: 672 TYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDM 724
Query: 477 IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
I PD +TY +L + + + F +KP+V +Y ++D + G
Sbjct: 725 KRREIVPDVVTYTVLLKNKPERNLSREMKAF--------DVKPDVFYYTVLIDWQCKIGD 776
Query: 537 LKEA---LDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIE--LEPENGSVYV 591
L EA D ++ V P++ + +L+ C ++ A+M ++IE ++P+
Sbjct: 777 LGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTA 836
Query: 592 LLCNIYAACKRWENLREVRTI--MMERGIKKT 621
L I C+ L+ V+ + M+E+GIK T
Sbjct: 837 L---IAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 177/416 (42%), Gaps = 34/416 (8%)
Query: 51 GETP----ISLLERCKSTYQLKQIHSKTIKM----GLSSDPVFGNKVIAFCCTQESGDVD 102
G+TP ++L +T L Q +T+KM G+ V N VI ++G++D
Sbjct: 461 GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLI--DAGELD 518
Query: 103 YARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFT 162
A ++++ H S +M+KG+ C ++ + P S F
Sbjct: 519 KAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRL--EFPLPKSVYFTLFTSLCA 576
Query: 163 NDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVV---- 218
+ + LLD KLG++ + I + V A + F + ++V
Sbjct: 577 EKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLF 636
Query: 219 TWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYL 278
T+ +M++ Y R+ V P+ VT ++L++ +L D+ +
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPEL-DMKREMEAFD-- 693
Query: 279 TEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQI 334
V P++V ++++ + ++ +F +MK R DV+++T ++ N +
Sbjct: 694 ----VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK---NKPER 746
Query: 335 DLAR--KYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILT 392
+L+R K FD P D +T +ID ++ EA +F +M S V PD +++
Sbjct: 747 NLSREMKAFDVKP--DVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Query: 393 ACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK 448
C +G L+ + + + ++ + D +ALI + G V KA K KEM +K
Sbjct: 805 CCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEK 860
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 124/320 (38%), Gaps = 56/320 (17%)
Query: 298 GACGEM---DAAKGVFDNMK---TRDVISWTSIVSGFANTGQIDLARKYFDQMPER---- 347
G C EM DA V D K DV +++I+ G I A F++M ++
Sbjct: 300 GLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRI 359
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALE-----L 402
+ V ++++ Y +M +F EA LF+E + +++ D A LG +E
Sbjct: 360 NCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELF 419
Query: 403 GEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM----HQKDKFIWTAMIV 458
E I + IN T IG + G A EM D I+ +
Sbjct: 420 REMTGKGIAPDVINYTTLIGGCCLQ-----GKCSDAFDLMIEMDGTGKTPDIVIYNVLAG 474
Query: 459 GLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMT------ 512
GLA NG +EA M + P +T+ V+ AG ++K F+ S+
Sbjct: 475 GLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREN 534
Query: 513 -------------IQHGIK---------PNVTHYGCMVDLLSRAGHLKEA---LDVILNM 547
+ H + P ++ L + ++ +A LD + +
Sbjct: 535 DASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKL 594
Query: 548 PVKPNSIVWGSLLGA-CRVH 566
V+P ++G L+GA CRV+
Sbjct: 595 GVEPEKSMYGKLIGAWCRVN 614
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/526 (20%), Positives = 227/526 (43%), Gaps = 62/526 (11%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTI----PHPSVFIWNTMIK 124
++ + + G+S + V +I C ++ D+ A +FD + P P+ ++ +I+
Sbjct: 325 RLKDEMLSDGISMNVVAATSLITGHC--KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 125 GYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDS 184
+ + + + Y M + P F +++G+ + L D + + GL +
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-A 441
Query: 185 NLFVQKAFIHLFSLCGLVD----LAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXX 240
N+FV + G D L K+ + G VV++N ++ G+ R
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 241 XXXXXXGVSPNSVTLVLILSACSKLTD---------------LAGGNYVYQYLTEGIVE- 284
G+ PN+ T +++ C + D + VYQ + G+ +
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561
Query: 285 ----------PNLVME----------NVLLDMFGACGEMDAAKGVFDNM----KTRDVIS 320
N++ E N ++D F GEMD+A ++ M + +VI+
Sbjct: 562 GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVIT 621
Query: 321 WTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQ 376
+TS+++G ++D A + D+M + D ++ A+IDG+ + ++ A ALF E+
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 377 MSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVE 436
+ P + S+++ +LG + + + K+ + D + LID K GN+
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 437 KARKTFKEMHQ----KDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVL 492
A + + EM D+ I+T ++ GL+ G + + MF M ++++TP+ + Y V+
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 493 SACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
+ G +++ + M + GI P+ + +V + G+L+
Sbjct: 802 AGHYREGNLDEAFRLHDEM-LDKGILPDGATFDILVS--GQVGNLQ 844
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 165/358 (46%), Gaps = 23/358 (6%)
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
G N ++++ K +++ V+ +T+ ++P +V N L++ + G +D
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 307 ---KGVFDNMKTR-DVISWTSIVSGFANTGQIDLARKYFDQMPERDYVS----WTAMIDG 358
K + +TR DV +++++++ ++D A FD+M +R + +T +I G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
+ R +++M ++PD +++ G L + + + + D
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFS 474
+ LID + + G+VE A + KEM Q D+ ++A++ G+ G +A
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 475 NMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRA 534
M+ + I PDD+TY ++ A G + G K M G P+V Y +++ L +
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ-SDGHVPSVVTYNVLLNGLCKL 533
Query: 535 GHLKEA---LDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGSV 589
G +K A LD +LN+ V P+ I + +LL H N ++K+ I+ +PE G V
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN------SSKRYIQ-KPEIGIV 584
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 144/350 (41%), Gaps = 28/350 (8%)
Query: 84 VFGNKVIAFCCTQESGDVDYARQVFDTIP----HPSVFIWNTMIKGYSRISCPKSGISMY 139
VF + FC + G++ A++VFD I P+V +NT+I GY ++ G +
Sbjct: 242 VFNILMNKFC---KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 140 LLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLC 199
M +PD FT+ L+ + + L D K GL N + IH S
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 200 GLVDLA----HKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTL 255
G +DL K+ + G ++V +N +++G+ + G+ P+ +T
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 256 VLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGE---MDAAKGVFDN 312
++ + D+ + + + + +E + V + L+ G C E +DA + + +
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV--CGMCKEGRVIDAERALREM 476
Query: 313 MKT---RDVISWTSIVSGFANTGQIDLARKYFDQMPERDY----VSWTAMIDGYLRMNHF 365
++ D +++T ++ F G K +M + V++ +++G ++
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
+ A L M V PD+ T ++L G K YI K +I
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLE-----GHHRHANSSKRYIQKPEI 581
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 188/423 (44%), Gaps = 23/423 (5%)
Query: 201 LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILS 260
++ K+ +G + + T+N++++ + R G P+ VTL +L+
Sbjct: 97 VISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLN 156
Query: 261 ACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR---- 316
++ + + E +P+ V L+ + A + D M R
Sbjct: 157 GFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQP 216
Query: 317 DVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALALF 372
D++++ ++V+G G DLA ++M E + V ++ +ID + H +AL LF
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Query: 373 REMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKC 432
EM+ V+P+ T S+++ + G + + + + KIN + SALID + K
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 433 GNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITY 488
G + KA K ++EM ++ + F ++++I G + EA M MI P+ +TY
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 489 IGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDV---IL 545
+++ A V+KG + F M+ Q G+ N Y ++ +A A V ++
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMS-QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455
Query: 546 NMPVKPNSIVWGSLL-GACRVHKNVELAE-MAAKQIIELEPENGSVYVLLCNIYAACK-- 601
++ V PN + + LL G C KN +LA+ M + ++ +Y I CK
Sbjct: 456 SVGVHPNILTYNILLDGLC---KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Query: 602 RWE 604
+W+
Sbjct: 513 KWK 515
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 194/448 (43%), Gaps = 27/448 (6%)
Query: 112 PHPSVFIWNTMIKGYSRIS----CPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMAL 167
P PS+ ++ ++ ++++ G M +L ++HN+ +T+ L+ F L
Sbjct: 74 PFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNL----YTYNILINCFCRCSRL 129
Query: 168 KYGKVLLDHAVKLGLDSNLF----VQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVM 223
LL +KLG + ++ + F H + V L ++ MG + VT+ +
Sbjct: 130 SLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTL 189
Query: 224 LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIV 283
+ G G P+ VT +++ K D + + +
Sbjct: 190 IHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARK 339
E N+V+ + ++D D A +F M+ + +VI+++S++S N G+ A +
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 340 YFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
M ER + V+++A+ID +++ +A L+ EM + P+ FT S++
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 396 HLGAL-ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DK 450
L L E + ++ I K+ + N + LI+ + K V+K + F+EM Q+ +
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPN-VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 451 FIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFAS 510
+T +I G + A +F M+ + P+ +TY +L G + K F
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 511 MTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
+ + ++P++ Y M++ + +AG K
Sbjct: 489 LQ-RSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 9/206 (4%)
Query: 102 DYARQVFDTIP---HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
D +R + D I +P++ ++ +I + + +Y M+ +I P+ FT+ L+
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF----NMGDA 214
GF L K +L+ ++ N+ I+ F VD ++F G
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 215 WEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYV 274
VT+ ++ G+ + GV PN +T ++L K LA V
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Query: 275 YQYLTEGIVEPNLVMENVLLDMFGAC 300
++YL +EP++ N++++ G C
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIE--GMC 509
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/546 (21%), Positives = 231/546 (42%), Gaps = 80/546 (14%)
Query: 72 SKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDT-IPH---PSVFIWNTMIKGYS 127
K I+ G P N I ++S ++ A V++T I H P+V +NTM+
Sbjct: 192 EKMIRKGFL--PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLD--- 246
Query: 128 RISCPKSGI-----SMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGL 182
SC K+G ++L M NI+ T+ L+ GF+ + ++ + + G
Sbjct: 247 --SCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF 304
Query: 183 DSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXX 242
+ I + GL D DAW V + ML+
Sbjct: 305 AVTPYSFNPLIEGYCKQGLFD---------DAWGVT--DEMLNA---------------- 337
Query: 243 XXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGE 302
G+ P + T + + A + + L + P++V N L+ + G+
Sbjct: 338 ----GIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGK 389
Query: 303 MDAAKGVFDNMKTRDV----ISWTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTA 354
A +FD+++ D+ +++ +++ G +G ++ A++ ++M + D +++T
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 355 MIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTY----- 409
++ G+++ + A ++ EM +KPD + + +G L LG+ K +
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT-----RAVGELRLGDSDKAFRLHEE 504
Query: 410 -IDKNKINNDTFIGSALIDMYFKCGNVEKA----RKTFKEMHQKDKFIWTAMIVGLAING 464
+ + D I + ID K GN+ KA RK F+ D +T +I G NG
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 465 HGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHY 524
+ A ++ M+ + P ITY ++ AG +E+ ++ M + G++PNV +
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK-KRGVRPNVMTH 623
Query: 525 GCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLLGA-CRVHKNVELAEMAAKQI- 579
++ + +AG++ EA + M + PN + L+ C K E+ ++ + +
Sbjct: 624 NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Query: 580 IELEPE 585
E+EP+
Sbjct: 684 KEIEPD 689
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 176/456 (38%), Gaps = 84/456 (18%)
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
G+ P +T +L +C K DL + ++ + +E + V N+L++ F G+M+ A
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 307 K-----------------------------------GVFDNMKTRDVISWTSI----VSG 327
+ GV D M + TS +
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 328 FANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTM 387
+ G+ID AR+ M D VS+ ++ GY++M F EA LF +++ + P T
Sbjct: 353 LCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 388 VSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ 447
+++ G LE + +K + I D + L+ + K GN+ A + + EM +
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 448 K----DKFIWTAMIVGLAINGHGEEALTMFSNMIESS----------------------- 480
K D + +T VG G ++A + M+ +
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 481 -------------ITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCM 527
+ PD +TY V+ G + R + M ++ + P+V Y +
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM-LRKRLYPSVITYFVL 591
Query: 528 VDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLL-GACRVHKNVELAEMAAKQIIELE 583
+ ++AG L++A M V+PN + +LL G C+ E K E
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Query: 584 PENGSVYVLLCNIYAACKRWENLREVRTIMMERGIK 619
P N Y +L + ++WE + ++ M+++ I+
Sbjct: 652 PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 17/289 (5%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
HPS+ +NT+I G + + M I PD T+ L+KGF + L
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
Query: 173 LLDHAVKLGL--DSNLFVQKAFIHLFSLCGLVDLAHKIFNM-----GDAWEVVTWNVMLS 225
+ D ++ G+ D + +A L G D A ++ A ++ +NV +
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGEL--RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523
Query: 226 GYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEP 285
G +V G+ P+ VT ++ + +Y + + P
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 583
Query: 286 NLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYF 341
+++ VL+ G ++ A MK R +V++ +++ G G ID A +Y
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Query: 342 DQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFT 386
+M E + S+T +I + E + L++EM ++PD +T
Sbjct: 644 CKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/504 (21%), Positives = 209/504 (41%), Gaps = 63/504 (12%)
Query: 118 IWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHA 177
I+N MI+ ++R + ++ M + KPD+ T+ L+ ++ L+D
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 178 VKLGLDSNLFVQKAFIHLFSLCG-------LVDLAHKIFNMGDAWEVVTWNVMLSGYNRV 230
++ + + + + +L + CG +++ K+ + G ++VT N++LS Y
Sbjct: 73 LRAAIAPS---RSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 129
Query: 231 XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE--PNLV 288
V P++ T +I+ SKL + ++ + E E P++V
Sbjct: 130 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTR-------------------------------- 316
++ ++ GE++ + VF+ M
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 317 -------DVISWTSIVSGFANTGQIDLARKYFDQM-PER---DYVSWTAMIDGYLRMNHF 365
DV+S+T +++ + + Q A++ F M ER + V++ A+ID Y
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 309
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
EA+ +FR+M+ +KP+ ++ ++L AC+ + V + IN +T ++
Sbjct: 310 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 369
Query: 426 IDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSI 481
I Y +EKA ++ M +K D +T +I G EA++ M + SI
Sbjct: 370 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 429
Query: 482 TPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEAL 541
Y VL A + G V + F M + G +P+V Y M+ + + +A
Sbjct: 430 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA-GCEPDVIAYTSMLHAYNASEKWGKAC 488
Query: 542 DVILNMP---VKPNSIVWGSLLGA 562
++ L M ++P+SI +L+ A
Sbjct: 489 ELFLEMEANGIEPDSIACSALMRA 512
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 166/401 (41%), Gaps = 23/401 (5%)
Query: 192 FIHLFSLCGLVDLAHKIFNMGDAW----EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG 247
I L + VD A +F W + T++ +++ + R
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 76
Query: 248 VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAK 307
++P+ T +++AC + V + +T+ V P+LV N++L + + + A
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 136
Query: 308 GVFDNMK----TRDVISWTSIVSGFANTGQIDLARKYFDQMPER------DYVSWTAMID 357
F+ MK D ++ I+ + GQ A F+ M E+ D V++T+++
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 358 GYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINN 417
Y A+F M +KP+ + +++ A A G V I +N I
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 418 DTFIGSALIDMYFKCGNVEKARKTF----KEMHQKDKFIWTAMIVGLAINGHGEEALTMF 473
D + L++ Y + KA++ F KE + + + A+I NG EA+ +F
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 474 SNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSR 533
M + I P+ ++ +L+AC+ + + S GI N Y +
Sbjct: 317 RQMEQDGIKPNVVSVCTLLAACSRSKK-KVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 375
Query: 534 AGHLKEALDVILNM---PVKPNSIVWGSLL-GACRVHKNVE 570
A L++A+ + +M VK +S+ + L+ G+CR+ K E
Sbjct: 376 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/420 (18%), Positives = 169/420 (40%), Gaps = 24/420 (5%)
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL-- 158
++ +++ D P + N ++ Y +S + LM ++PD+ TF ++
Sbjct: 101 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 160
Query: 159 --KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM----G 212
K + AL + + + D F + +HL+S+ G ++ +F G
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFT--SIMHLYSVKGEIENCRAVFEAMVAEG 218
Query: 213 DAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGN 272
+V++N ++ Y G+ P+ V+ +L++ +
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 278
Query: 273 YVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGF 328
V+ + + +PN+V N L+D +G+ G + A +F M+ +V+S ++++
Sbjct: 279 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 329 ANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
+ + + R + ++ + I Y+ +A+AL++ M+ VK D
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Query: 385 FTMVSILTACAHLGAL-ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK 443
T +++ + E ++K D + I + S+++ Y K G V +A F
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEMEDLS-IPLTKEVYSSVLCAYSKQGQVTEAESIFN 457
Query: 444 EMH----QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAG 499
+M + D +T+M+ + +A +F M + I PD I ++ A G
Sbjct: 458 QMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/458 (21%), Positives = 193/458 (42%), Gaps = 47/458 (10%)
Query: 168 KYGKV-----LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN----MGDAWEVV 218
+YGKV + + A G + ++ A I + GL + A +FN G +V
Sbjct: 245 RYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLV 304
Query: 219 TWNVMLSGYNRVXXXXXXXXXX-XXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQY 277
T+N ++ + GV P+ +T +L+ CS+ ++
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQ 333
+T +E ++ N LLD G+MD A + M + +V+S+++++ GFA G+
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 334 IDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVS 389
D A F +M D VS+ ++ Y ++ EAL + REM +K D T +
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 390 ILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH--- 446
+L G + + V T + + + + S LID Y K G ++A + F+E
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 447 -QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGR 505
+ D +++A+I L NG A+++ M + I+P+ +TY ++ A + +++
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSA 604
Query: 506 KF------------FASMTIQHGIK------------PNVTHYGCMVDLLSRAGHLKEAL 541
+ +++T G + N T C + + + E
Sbjct: 605 DYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCE-EGMQELSCILEVF 663
Query: 542 DVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQI 579
+ + +KPN + + ++L AC + E A M +++
Sbjct: 664 RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 133/310 (42%), Gaps = 17/310 (5%)
Query: 267 DLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKT----RDVISWT 322
D A G Y + E + + ++ G G++ AK +F+ V +++
Sbjct: 213 DKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFS 272
Query: 323 SIVSGFANTGQIDLARKYFDQMPE----RDYVSWTAMIDGYLRMN-HFREALALFREMQM 377
+++S + +G + A F+ M E + V++ A+ID + F++ F EMQ
Sbjct: 273 ALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR 332
Query: 378 SHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEK 437
+ V+PD T S+L C+ G E + + +I D F + L+D K G ++
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 438 ARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLS 493
A + +M K + ++ +I G A G +EAL +F M I D ++Y +LS
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 494 ACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMP---VK 550
T G E+ M GIK +V Y ++ + G E V M V
Sbjct: 453 IYTKVGRSEEALDILREMA-SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 551 PNSIVWGSLL 560
PN + + +L+
Sbjct: 512 PNLLTYSTLI 521
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/487 (18%), Positives = 202/487 (41%), Gaps = 39/487 (8%)
Query: 99 GDVDYARQVFDTI----PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTF 154
G V A+++F+T +V+ ++ +I Y R + IS++ M + ++P+ T+
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 155 PFLLKG-FTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF---- 209
++ M K D + G+ + + + + S GL + A +F
Sbjct: 307 NAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT 366
Query: 210 NMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLA 269
N +V ++N +L + + PN V+ ++ +K
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 270 GGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKT----RDVISWTSIV 325
++ + + + V N LL ++ G + A + M + +DV+++ +++
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 326 SGFANTGQIDLARKYFDQMPERDYV-----SWTAMIDGYLRMNHFREALALFREMQMSHV 380
G+ G+ D +K F +M +R++V +++ +IDGY + ++EA+ +FRE + + +
Sbjct: 487 GGYGKQGKYDEVKKVFTEM-KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 381 KPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARK 440
+ D +++ A G + + + K I+ + +++ID + + ++++
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS-- 603
Query: 441 TFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESS---ITPDDITYIGVLSACTH 497
+ +++ + G + +F + S T D + LS
Sbjct: 604 --ADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSC--- 658
Query: 498 AGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVKPN---SI 554
++E RK Q IKPNV + +++ SR ++A ++ + + N +
Sbjct: 659 --ILEVFRKMH-----QLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGV 711
Query: 555 VWGSLLG 561
V G L+G
Sbjct: 712 VHGLLMG 718
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/378 (18%), Positives = 146/378 (38%), Gaps = 49/378 (12%)
Query: 66 QLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPH----PSVFIWNT 121
Q+ + + + G+ D + N ++A C G + AR +FD + + VF +NT
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCS--RGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 122 MIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLG 181
++ + + M I P+ ++ ++ GF L LG
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 182 LDSNLFVQKAFIHLFSLCG----LVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXX 237
+ + + +++ G +D+ ++ ++G +VVT+N +L GY +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 238 XXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY-----VYQYLTEGIVEPNLVMENV 292
V PN +T ++ SK GG Y +++ + ++V+ +
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSK-----GGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 293 LLDMFGACGEMDAAKGVFDNMK----TRDVISWTSIVSGFANTGQIDLARKYFD--QMP- 345
L+D G + +A + D M + +V+++ SI+ F + +D + Y + +P
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPF 614
Query: 346 ERDYVSWTAMIDGYLRMNHFRE----------------------ALALFREMQMSHVKPD 383
+S +G + F + L +FR+M +KP+
Sbjct: 615 SSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPN 674
Query: 384 EFTMVSILTACAHLGALE 401
T +IL AC+ + E
Sbjct: 675 VVTFSAILNACSRCNSFE 692
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 412 KNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM----HQKDKFIWTAMIVGLAINGHGE 467
+ + N + SA+I + G V A++ F+ + + ++A+I +G E
Sbjct: 226 ERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHE 285
Query: 468 EALTMFSNMIESSITPDDITYIGVLSACTHAGM-VEKGRKFFASMTIQHGIKPNVTHYGC 526
EA+++F++M E + P+ +TY V+ AC GM ++ KFF M ++G++P+ +
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ-RNGVQPDRITFNS 344
Query: 527 MVDLLSRAGHLKEA---LDVILNMPVKPNSIVWGSLLGACRVHKNVELA-EMAAKQIIEL 582
++ + SR G + A D + N ++ + + +LL A ++LA E+ A+ ++
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 583 EPENGSVYVLLCNIYAACKRWE 604
N Y + + +A R++
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFD 426
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/504 (21%), Positives = 209/504 (41%), Gaps = 63/504 (12%)
Query: 118 IWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHA 177
I+N MI+ ++R + ++ M + KPD+ T+ L+ ++ L+D
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 178 VKLGLDSNLFVQKAFIHLFSLCG-------LVDLAHKIFNMGDAWEVVTWNVMLSGYNRV 230
++ + + + + +L + CG +++ K+ + G ++VT N++LS Y
Sbjct: 205 LRAAIAPS---RSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 261
Query: 231 XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE--PNLV 288
V P++ T +I+ SKL + ++ + E E P++V
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTR-------------------------------- 316
++ ++ GE++ + VF+ M
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381
Query: 317 -------DVISWTSIVSGFANTGQIDLARKYFDQM-PER---DYVSWTAMIDGYLRMNHF 365
DV+S+T +++ + + Q A++ F M ER + V++ A+ID Y
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 366 REALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSAL 425
EA+ +FR+M+ +KP+ ++ ++L AC+ + V + IN +T ++
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501
Query: 426 IDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSI 481
I Y +EKA ++ M +K D +T +I G EA++ M + SI
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 482 TPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEAL 541
Y VL A + G V + F M + G +P+V Y M+ + + +A
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA-GCEPDVIAYTSMLHAYNASEKWGKAC 620
Query: 542 DVILNMP---VKPNSIVWGSLLGA 562
++ L M ++P+SI +L+ A
Sbjct: 621 ELFLEMEANGIEPDSIACSALMRA 644
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 166/400 (41%), Gaps = 23/400 (5%)
Query: 193 IHLFSLCGLVDLAHKIFNMGDAW----EVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGV 248
I L + VD A +F W + T++ +++ + R +
Sbjct: 150 IRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAI 209
Query: 249 SPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKG 308
+P+ T +++AC + V + +T+ V P+LV N++L + + + A
Sbjct: 210 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 269
Query: 309 VFDNMK----TRDVISWTSIVSGFANTGQIDLARKYFDQMPER------DYVSWTAMIDG 358
F+ MK D ++ I+ + GQ A F+ M E+ D V++T+++
Sbjct: 270 YFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHL 329
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
Y A+F M +KP+ + +++ A A G V I +N I D
Sbjct: 330 YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 389
Query: 419 TFIGSALIDMYFKCGNVEKARKTF----KEMHQKDKFIWTAMIVGLAINGHGEEALTMFS 474
+ L++ Y + KA++ F KE + + + A+I NG EA+ +F
Sbjct: 390 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
Query: 475 NMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRA 534
M + I P+ ++ +L+AC+ + + S GI N Y + A
Sbjct: 450 QMEQDGIKPNVVSVCTLLAACSRSKK-KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 508
Query: 535 GHLKEALDVILNM---PVKPNSIVWGSLL-GACRVHKNVE 570
L++A+ + +M VK +S+ + L+ G+CR+ K E
Sbjct: 509 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/420 (18%), Positives = 169/420 (40%), Gaps = 24/420 (5%)
Query: 101 VDYARQVFDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL-- 158
++ +++ D P + N ++ Y +S + LM ++PD+ TF ++
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 292
Query: 159 --KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM----G 212
K + AL + + + D F + +HL+S+ G ++ +F G
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFT--SIMHLYSVKGEIENCRAVFEAMVAEG 350
Query: 213 DAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGN 272
+V++N ++ Y G+ P+ V+ +L++ +
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 273 YVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGF 328
V+ + + +PN+V N L+D +G+ G + A +F M+ +V+S ++++
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Query: 329 ANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDE 384
+ + + R + ++ + I Y+ +A+AL++ M+ VK D
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 385 FTMVSILTACAHLGAL-ELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFK 443
T +++ + E ++K D + I + S+++ Y K G V +A F
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLS-IPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 444 EMH----QKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAG 499
+M + D +T+M+ + +A +F M + I PD I ++ A G
Sbjct: 590 QMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/535 (20%), Positives = 223/535 (41%), Gaps = 34/535 (6%)
Query: 69 QIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPH----PSVFIWNTMIK 124
++ K + G+S NK++ C + GDV ++ D + P++F +N I+
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKK--GDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259
Query: 125 GYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDS 184
G + + M ++ KPD T+ L+ G + + +V L V GL+
Sbjct: 260 GLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 185 NLFVQKAFIHLFSLCGLVDLAHKIFNMGDAW------EVVTWNVMLSGYNRVXXXXXXXX 238
+ + I + G+V LA +I +GDA + T+ ++ G
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERI--VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 239 XXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFG 298
G+ PN + ++ S + + ++E + P + N+L++
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 299 ACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQMPER----DYV 350
G + A G+ M ++ D+ ++ ++ G++ +++ A + D M + D
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 351 SWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYI 410
++ ++++G + + F + + ++ M P+ FT +L + L+ + +
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 411 DKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEE-- 468
+N D LID + K G+++ A F++M + K + + I+ E+
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 469 ---ALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYG 525
A +F M++ + PD TY ++ G V G KF M +++G P++T G
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM-MENGFIPSLTTLG 676
Query: 526 CMVDLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQII 580
+++ L + EA +I M K +V ++ C V K E+AA +++
Sbjct: 677 RVINCLCVEDRVYEAAGIIHRMVQK--GLVPEAVNTICDVDKK----EVAAPKLV 725
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 113/504 (22%), Positives = 207/504 (41%), Gaps = 53/504 (10%)
Query: 99 GDVDYARQVFDTIP----HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTF 154
G V A VF+ + P+VF +N ++ +Y+ M I PD ++F
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 155 PFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLV------------ 202
+K F K HA L L +N+ Q +++ + C +V
Sbjct: 150 TIRMKSFC--------KTSRPHAA-LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 203 -DLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSA 261
+L K+ G + + T+N +L + GV PN T L +
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 262 CSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGAC-------GEMDAAKGVFDNMK 314
+ +L G + L E +P+++ N L+ +G C E+ K V + ++
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI--YGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 315 TRDVISWTSIVSGFANTGQIDLARKYFDQMPERDYV----SWTAMIDGYLRMNHFREALA 370
D ++ ++++G+ G + LA + +V ++ ++IDG ALA
Sbjct: 319 P-DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 371 LFREMQMSHVKPDEFTMVSILTACAHLGA-LELGEWVKTYIDKNKINN-DTFIGSALIDM 428
LF E +KP+ +++ ++ G LE + +K I TF + L++
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF--NILVNG 435
Query: 429 YFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPD 484
K G V A K M K D F + +I G + E AL + M+++ + PD
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 485 DITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
TY +L+ E + + +M ++ G PN+ + +++ L R L EAL ++
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTM-VEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 545 LNM---PVKPNSIVWGSLL-GACR 564
M V P+++ +G+L+ G C+
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCK 578
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/513 (20%), Positives = 208/513 (40%), Gaps = 39/513 (7%)
Query: 45 CDPHCFGETPI-SLLERCKSTYQLKQIHSKTIKMGLSSDPV-FGNKVIAFCCTQESGDVD 102
C+P F I S+L Q +++ + G++ D F ++ +FC T
Sbjct: 107 CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRP---H 163
Query: 103 YARQVFDTIPHP----SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLL 158
A ++ + + +V + T++ G+ + G ++ MLA + TF LL
Sbjct: 164 AALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLL 223
Query: 159 KGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLC------GLVDLAHKIFNMG 212
+ +K + LLD +K G+ NLF FI LC G V + + G
Sbjct: 224 RVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ--GLCQRGELDGAVRMVGCLIEQG 281
Query: 213 DAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTL-VLILSACS----KLTD 267
+V+T+N ++ G + G+ P+S T LI C +L +
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 268 LAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTS 323
G+ V+ G V P+ L+D GE + A +F+ + +VI + +
Sbjct: 342 RIVGDAVFN----GFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 324 IVSGFANTGQIDLARKYFDQMPERDYV----SWTAMIDGYLRMNHFREALALFREMQMSH 379
++ G +N G I A + ++M E+ + ++ +++G +M +A L + M
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 380 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKAR 439
PD FT ++ + +E + + N ++ D + ++L++ K E
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 440 KTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSAC 495
+T+K M +K + F + ++ L +EAL + M S+ PD +T+ ++
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 496 THAGMVEKGRKFFASMTIQHGIKPNVTHYGCMV 528
G ++ F M + + + Y ++
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 222/540 (41%), Gaps = 73/540 (13%)
Query: 112 PHPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKG---FTNDMALK 168
P PS +++ + Y P + ++ M+ +KP+ T LL G + + ++
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186
Query: 169 YGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCG-LVDLAHKIFNMGDAWEV----VTWNVM 223
+ + D VK+G+ N+ ++ + L G L D + M ++V VT+N +
Sbjct: 187 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 224 LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIV 283
L ++ G+ PN VT ++ KL L + + + + V
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKT----RDVISWTSIVSGFANTGQIDLARK 339
P+L N+L++ G M + D MK+ DV+++ +++ G G ARK
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Query: 340 YFDQMPER----------------------------------------DYVSWTAMIDGY 359
+QM D V++ +I Y
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 360 LRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDT 419
L++ AL + REM +K + T+ +IL A L+ + K D
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 420 FIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWT-----AMIVGLAINGHGEEALTMFS 474
LI +F+ VEKA + + EM +K K T ++I GL +G E A+ F
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEM-KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545
Query: 475 NMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDL--LS 532
+ ES + PDD T+ ++ G VEK +F+ +I+H KP+ +Y C + L L
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE-SIKHSFKPD--NYTCNILLNGLC 602
Query: 533 RAGHLKEALDVI--LNMPVKPNSIVWGSLLGA-CRVHKNVE----LAEMAAKQIIELEPE 585
+ G ++AL+ L + +++ + +++ A C+ K E L+EM K LEP+
Sbjct: 603 KEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG---LEPD 659
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 176/441 (39%), Gaps = 40/441 (9%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
P+ +N ++ GY ++ K + LM N+ PD T+ L+ G N +++ G L
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF----NMGDAWEVVTWNVMLSGY-N 228
+D L L ++ I GL A K+ N G VT N+ L
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
G SP+ VT ++ A K+ DL+G + + + + ++ N +
Sbjct: 393 EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERD 348
N +LD ++D A + ++ R I D
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIV---------------------------D 485
Query: 349 YVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELG-EWVK 407
V++ +I G+ R +AL ++ EM+ + P T S++ H G EL E
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKA----RKTFKEMHQKDKFIWTAMIVGLAIN 463
+ + +D+ S ++ Y K G VEKA ++ K + D + ++ GL
Sbjct: 546 ELAESGLLPDDSTFNSIILG-YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 464 GHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTH 523
G E+AL F+ +IE D +TY ++SA +++ + M + G++P+
Sbjct: 605 GMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEME-EKGLEPDRFT 662
Query: 524 YGCMVDLLSRAGHLKEALDVI 544
Y + LL G L E +++
Sbjct: 663 YNSFISLLMEDGKLSETDELL 683
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 220/466 (47%), Gaps = 40/466 (8%)
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEG---IVEPNLVMENVLLDMFGACGEM 303
G P+ ++ ++ + D+ + V + L I +P++V N L + F +
Sbjct: 86 GCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKML 145
Query: 304 DAA---KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPERD-----YVSWTAM 355
D GV + +V+++++ + F +G++ LA K F M +RD V++T +
Sbjct: 146 DEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSM-KRDALSPNVVTFTCL 204
Query: 356 IDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
IDGY + A++L++EM+ + + T +++ G ++ E + + + ++++
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264
Query: 416 NNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALT 471
++ + + +ID +F+ G+ + A K +M + D + +I GL NG +EA
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE 324
Query: 472 MFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLL 531
+ +M +S + PD + + +++A +G ++ + + I+ G +P+V M+D +
Sbjct: 325 IVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL-IERGFEPDVVALSTMIDGI 383
Query: 532 SRAGHLKEALDVILNMPVKPNSIVWGSLLGA-CRVHKNVELAEMAAKQIIE--LEPENGS 588
++ G L EA ++ K N +++ L+ A C+ +E+ + +K I E L P+
Sbjct: 384 AKNGQLHEA--IVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSK-ISEAGLVPDK-- 438
Query: 589 VYVLLCNIYAACKRWE--NLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQS 646
++ I CK+ + +++T M++ G+ L+ +IY S
Sbjct: 439 -FMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL----LDLLAYTTLIYGLA--------S 485
Query: 647 KEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEEDKETALFRHSEKL 692
K + + + ++ N+G SPD++ L I +KE + S+ L
Sbjct: 486 KGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 168/447 (37%), Gaps = 83/447 (18%)
Query: 92 FCCTQESGDVDYARQVFDTIPH----PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNI 147
FC +SG++ A + F ++ P+V + +I GY + + +S+Y M +
Sbjct: 173 FC---KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 148 KPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLA-- 205
+ T+ L+ GF ++ + + V+ ++ N V I F G D A
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 206 --HKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACS 263
K+ N G ++ + V++SG L
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISG--------------------------------LCGNG 317
Query: 264 KLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVI 319
KL + + + + + + P++V+ +++ + G M AA ++ + R DV+
Sbjct: 318 KLKE---ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Query: 320 SWTSIVSGFANTGQIDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSH 379
+ ++++ G A GQ+ A YF D V +T +ID + F E LF ++ +
Sbjct: 375 ALSTMIDGIAKNGQLHEAIVYFCIEKAND-VMYTVLIDALCKEGDFIEVERLFSKISEAG 433
Query: 380 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKAR 439
+ PD+F S + G L +D K+ L+D+
Sbjct: 434 LVPDKFMYTSWIAGLCKQGNL---------VDAFKLKTRMVQEGLLLDL----------- 473
Query: 440 KTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAG 499
+T +I GLA G EA +F M+ S I+PD + ++ A G
Sbjct: 474 -----------LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Query: 500 MVEKGRKFFASMTIQHGIKPNVTHYGC 526
+ M + G+ V+ C
Sbjct: 523 NMAAASDLLLDMQ-RRGLVTAVSDADC 548
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 196/476 (41%), Gaps = 45/476 (9%)
Query: 101 VDYARQV-FDTIPHPSVFIWNTMIKGYSRISCPKSGISMYLL--MLAHNIKPDSFTFPFL 157
+D+ +Q+ + I H +++ N MI + R C K+ + +L ++ +PD+ TF L
Sbjct: 108 LDFCKQLELNGIAH-NIYTLNIMINCFCR--CCKTCFAYSVLGKVMKLGYEPDTTTFNTL 164
Query: 158 LKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCG----LVDLAHKIFNMGD 213
+KG + + VL+D V+ G ++ + ++ G +DL K+
Sbjct: 165 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 224
Query: 214 AWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY 273
+V T++ ++ R G+ + VT ++ K G
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 274 VYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDVISWTSIVSGFANTGQ 333
+ + + + PN++ NVLLD+F G++ A ++ M TR +
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI--------------- 329
Query: 334 IDLARKYFDQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTA 393
+ +++ ++DGY N EA + M + PD T S++
Sbjct: 330 ------------SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 394 CAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQ----KD 449
+ ++ G V I K + + S L+ + + G ++ A + F+EM D
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 450 KFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFA 509
+ ++ GL NG E+AL +F ++ +S + + Y ++ G VE F
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 510 SMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNMPVK---PNSIVWGSLLGA 562
S+ + G+KPNV Y M+ L + G L EA ++ M PN + +L+ A
Sbjct: 498 SLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 179/440 (40%), Gaps = 21/440 (4%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
P +NT+IKG + + M+ + +PD T+ ++ G
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLC--GLVDLAHKIF----NMGDAWEVVTWNVMLSG 226
LL + + +++F I SLC G +D A +F G VVT+N ++ G
Sbjct: 215 LLRKMEERNVKADVFTYSTIID--SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN 286
+ + PN +T ++L K L N +Y+ + + PN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 287 LVMENVLLDMFGACGEMDAAKGVFD----NMKTRDVISWTSIVSGFANTGQIDLARKYFD 342
++ N L+D + + A + D N + D++++TS++ G+ ++D K F
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 343 QMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLG 398
+ +R + V+++ ++ G+ + + A LF+EM V PD T +L G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWT 454
LE + + K+K++ + + +I+ K G VE A F + K + +T
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
MI GL G EA + M E P+D TY ++ A G + K M
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK-S 571
Query: 515 HGIKPNVTHYGCMVDLLSRA 534
G + + ++D+L A
Sbjct: 572 CGFSADASSIKMVIDMLLSA 591
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 148/323 (45%), Gaps = 30/323 (9%)
Query: 284 EPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARK 339
EP+ N L+ G++ A + D M DV+++ SIV+G +G LA
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 340 YFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACA 395
+M ER D +++ +ID R A++LF+EM+ +K T S++
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 396 HL-----GALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK-- 448
GAL L + V I N I TF + L+D++ K G +++A + +KEM +
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVI---TF--NVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 449 --DKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRK 506
+ + ++ G + EA M M+ + +PD +T+ ++ V+ G K
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 507 FFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM---PVKPNSIVWGSLL-GA 562
F +++ + G+ N Y +V ++G +K A ++ M V P+ + +G LL G
Sbjct: 390 VFRNIS-KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 563 C---RVHKNVELAEMAAKQIIEL 582
C ++ K +E+ E K ++L
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDL 471
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 144/683 (21%), Positives = 260/683 (38%), Gaps = 124/683 (18%)
Query: 47 PHCFGETPISLL---ERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVIAFCCTQESGDV-- 101
PHC E+ SLL RC++ L QI +G S FG V C G V
Sbjct: 95 PHC-PESYNSLLLVMARCRNFDALDQI------LGEMSVAGFGPSVNT-CIEMVLGCVKA 146
Query: 102 DYARQVFDTIP-------HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTF 154
+ R+ +D + P+ + T+I +S ++ ++++ M +P F
Sbjct: 147 NKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLF 206
Query: 155 PFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN---- 210
L++GF + + LLD LD+++ + I F G VD+A K F+
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 211 ----------------------MGDAWEVV-------------TWNVMLSGYNRVXXXXX 235
+ +A E+ +N M+ GY
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLD 295
G P+ + IL+ K+ + V++ + + PNL N+L+D
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILID 385
Query: 296 MFGACGEMDAA---------KGVFDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPE 346
M G++D A G+F N++T +++ V + ++D A F++M
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM-----VDRLCKSQKLDEACAMFEEMDY 440
Query: 347 R----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALEL 402
+ D +++ ++IDG ++ +A ++ +M S + + S++ + G E
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 403 GEWV-KTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMI 457
G + K I++N + D + + +D FK G EK R F+E+ + D ++ +I
Sbjct: 501 GHKIYKDMINQN-CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
GL G E +F +M E D Y V+ G V K + M + G
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK-GF 618
Query: 518 KPNVTHYGCMVDLLSRAGHLKEA------------------------------------- 540
+P V YG ++D L++ L EA
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 541 -LDVILNMPVKPNSIVWGSLLGACRVHKNVELAEMAAKQIIELE-PENGSVYVLLCNIYA 598
L+ ++ + PN W SLL A + + A + + + EL+ N Y +L N
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 599 ACKRWENLREVRTIMMERGIKKT 621
+++ M ++G+K +
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPS 761
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 190/462 (41%), Gaps = 37/462 (8%)
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
G P+ T + ++ C K L G V Q + + P L+ F A D
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 307 KGVFDNMKT----RDVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDG 358
+F M+ V +T+++ GFA G++D A D+M + D V + ID
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 359 YLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINND 418
+ ++ A F E++ + +KPDE T S++ L+ + +++KN+
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 419 TFIGSALIDMYFKCGNVEKARKTFKEMHQKDK----FIWTAMIVGLAINGHGEEALTMFS 474
T+ + +I Y G ++A + K + ++ L G +EAL +F
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 475 NMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRA 534
M + P+ TY ++ AG ++ + SM + G+ PNV MVD L ++
Sbjct: 368 EM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ-KAGLFPNVRTVNIMVDRLCKS 425
Query: 535 GHLKEALDVILNMPVK---PNSIVWGSLLGACRVHKNVELAEMAAKQIIELEPENGS-VY 590
L EA + M K P+ I + SL+ V+ A +++++ + S VY
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 591 VLLCNIYAACKRWENLREVRTIMMERGIKKTPGCSLM-------------EMNGIIYEFV 637
L + R E+ ++ M+ + +P L+ E ++E +
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNC--SPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 638 AGDQSHPQSKEIYAKLENMMQDLTNAGYSPDTSEVFLDIGEE 679
+ P ++ Y+ L + L AG++ +T E+F + E+
Sbjct: 544 KARRFVPDARS-YSIL---IHGLIKAGFANETYELFYSMKEQ 581
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/483 (18%), Positives = 178/483 (36%), Gaps = 98/483 (20%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV- 172
PSV +N ++ ++ + ++ M + P+ T+ L+ DM + GK+
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILI-----DMLCRAGKLD 394
Query: 173 ----LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGD----AWEVVTWNVML 224
L D K GL N+ + +D A +F D + +T+ ++
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 225 SGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
G +V NS+ ++ G+ +Y+ +
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 285 PNLVMENVLLDMFGACGEMDAAKGVFDNMKTR---------------------------- 316
P+L + N +D GE + + +F+ +K R
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 317 -----------DVISWTSIVSGFANTGQIDLARKYFDQMPERDY----VSWTAMIDGYLR 361
D ++ ++ GF G+++ A + ++M + + V++ ++IDG +
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 362 MNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFI 421
++ EA LF E + +I + I
Sbjct: 635 IDRLDEAYMLFEEAK-----------------------------------SKRIELNVVI 659
Query: 422 GSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEALTMFSNMI 477
S+LID + K G +++A +E+ QK + + W +++ L EAL F +M
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 478 ESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHL 537
E TP+ +TY +++ K F+ M Q G+KP+ Y M+ L++AG++
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ-GMKPSTISYTTMISGLAKAGNI 778
Query: 538 KEA 540
EA
Sbjct: 779 AEA 781
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 116/299 (38%), Gaps = 16/299 (5%)
Query: 94 CTQESGDVDYARQVFDTIPH----PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKP 149
C ++G+ + R +F+ I P ++ +I G + ++ M
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 150 DSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF 209
D+ + ++ GF + LL+ G + + + I + +D A+ +F
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 210 NMGDA----WEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKL 265
+ VV ++ ++ G+ +V G++PN T +L A K
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 266 TDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISW 321
++ +Q + E PN V +L++ + + A + M+ + IS+
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 322 TSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQ 376
T+++SG A G I A FD+ D + AMI+G N +A +LF E +
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 177/443 (39%), Gaps = 17/443 (3%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
PS+ +N++I Y+R + + M KPD FT+ LL GF ++ +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM----GDAWEVVTWNVMLSGYNR 229
+ G N+ AFI ++ G KIF+ G + ++VTWN +L+ + +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
G P T ++SA S+ VY+ + + V P+L
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMK----TRDVISWTSIVSGFANTGQI----DLARKYF 341
N +L G + ++ V M+ + +++ S++ +AN +I LA + +
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 342 DQMPERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALE 401
+ E V ++ + + EA F E++ PD T+ S+++ +
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 402 LGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMI 457
V Y+ + ++L+ M+ + + K+ + +E+ K D + +I
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGI 517
N +A +FS M S I PD ITY + + M E+ M I+HG
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM-IKHGC 765
Query: 518 KPNVTHYGCMVDLLSRAGHLKEA 540
+PN Y +VD + EA
Sbjct: 766 RPNQNTYNSIVDGYCKLNRKDEA 788
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/512 (20%), Positives = 206/512 (40%), Gaps = 77/512 (15%)
Query: 181 GLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM----GDAWEVVTWNVMLSGYNRVXXX-XX 235
G +++ + I F+ G A +F G ++T+NV+L+ + ++
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 236 XXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLD 295
G++P++ T +++ C + + V++ + + V N LLD
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 296 MFGACGEMDAAKGVFDNMK----TRDVISWTSIVSGFANTGQIDLARKYFDQMPER---- 347
++G A V + M + ++++ S++S +A G +D A + +QM E+
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVK 407
D ++T ++ G+ R A+++F EM+ + KP+ T
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF-------------------- 422
Query: 408 TYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMH----QKDKFIWTAMIVGLAIN 463
+A I MY G + K F E++ D W ++ N
Sbjct: 423 ---------------NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 464 GHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTH 523
G E +F M + P+ T+ ++SA + G E+ + M + G+ P+++
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM-LDAGVTPDLST 526
Query: 524 YGCMVDLLSRAGHLKEALDVILNMP---VKPNSIVWGSLLGACRVHKNVELAEMAAKQII 580
Y ++ L+R G +++ V+ M KPN + + SLL A K + L A+++
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 581 E--LEPENGSVYVLLCNIYAACKRWENLREVR---TIMMERGIKKTPGCSLMEMNGIIYE 635
+EP VLL + C + + L E + + ERG +P + + IY
Sbjct: 587 SGVIEPRA----VLLKTLVLVCSKCDLLPEAERAFSELKERGF--SPDITTLNSMVSIY- 639
Query: 636 FVAGDQSHPQSKEIYAKLENMMQDLTNAGYSP 667
+++ AK ++ + G++P
Sbjct: 640 ---------GRRQMVAKANGVLDYMKERGFTP 662
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/507 (17%), Positives = 194/507 (38%), Gaps = 62/507 (12%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGI-SMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
P++ +N ++ + ++ P + I S+ M + I PD++T+ L+ +
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNM----GDAWEVVTWNVMLSGYN 228
+ + G + A + ++ A K+ N G + +VT+N ++S Y
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLV 288
R G P+ T +LS + + +++ + +PN+
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 289 MENVLLDMFGACGEMDAAKGVFDNMK----TRDVISWTSIVSGFANTGQIDLARKYFDQM 344
N + M+G G+ +FD + + D+++W ++++ F G F +M
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 345 ------PERDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLG 398
PER+ ++ +I Y R F +A+ ++R M + V PD T ++L A A G
Sbjct: 481 KRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYF---------------------------- 430
E E V ++ + + +L+ Y
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598
Query: 431 -------KCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSN-----MIE 478
KC + +A + F E+ ++ F + ++ +G + +N M E
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERG-FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE 657
Query: 479 SSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLK 538
TP TY ++ + + K + + + GIKP++ Y ++ R ++
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREI-LAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 539 EALDV---ILNMPVKPNSIVWGSLLGA 562
+A + + N + P+ I + + +G+
Sbjct: 717 DASRIFSEMRNSGIVPDVITYNTFIGS 743
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 158/416 (37%), Gaps = 93/416 (22%)
Query: 292 VLLDMFGACGEMDAAKGVFDNMK----TRDVISWTSIVSGFANTGQIDLARKYFDQMPER 347
+++ M G G + +A +F+ ++ + DV S+TS++S FAN+G+
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGR-------------- 223
Query: 348 DYVSWTAMIDGYLRMNHFREALALFREMQMSHVK-------------------------- 381
+REA+ +F++M+ K
Sbjct: 224 -----------------YREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 382 ----------PDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFK 431
PD +T +++T C + V + + D +AL+D+Y K
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 432 CGNVEKARKTFKEM----HQKDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDIT 487
++A K EM + ++I A +G +EA+ + + M E PD T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 488 YIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM 547
Y +LS AG VE F M G KPN+ + + + G E + + +
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMR-NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 548 PV---KPNSIVWGSLL---GACRVHKNVE--LAEMAAKQIIELEPENGSVYVLLCNIYAA 599
V P+ + W +LL G + V EM + PE + L + Y+
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV---PER-ETFNTLISAYSR 501
Query: 600 CKRWENLREVRTIMMERGIKKTPGCSLMEMNGIIYEFVAGDQSHPQSKEIYAKLEN 655
C +E V M++ G+ TP L N ++ G QS+++ A++E+
Sbjct: 502 CGSFEQAMTVYRRMLDAGV--TP--DLSTYNTVLAALARGGMWE-QSEKVLAEMED 552
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 151/420 (35%), Gaps = 86/420 (20%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
P VF + T++ G+ R +S +S++ M KP+ TF +K + N +
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN----MGDAWEVVTWNVMLSGYNR 229
D GL ++ + +F G+ +F G E T+N ++S Y+R
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSA---------------------------- 261
GV+P+ T +L+A
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 262 -CSKLTDLAGGNYV------YQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMK 314
CS L A G + + + G++EP V+ L+ + C + A+ F +K
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 621
Query: 315 TR----DVISWTSIVSGFANTGQIDLARKYFDQMPER----------------------- 347
R D+ + S+VS + + A D M ER
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 348 ----------------DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSIL 391
D +S+ +I Y R R+A +F EM+ S + PD T + +
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 392 TACAHLGALELGEWVKTYIDKN--KINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKD 449
+ A E V Y+ K+ + N +T+ ++++D Y K ++A+ +++ D
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTY--NSIVDGYCKLNRKDEAKLFVEDLRNLD 799
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 219/538 (40%), Gaps = 45/538 (8%)
Query: 78 GLSSDP-VFGNKVIAFCCTQESGDVDYARQVFDTIPH----PSVFIWNTMIKGYSRISCP 132
G+S D +F + AFC + G V+ A ++F + P+V +NT+I G
Sbjct: 255 GVSPDVYLFTTAINAFC---KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 133 KSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQK-- 190
M+ ++P T+ L+KG T + +L K G N+ V
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 191 --AFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG- 247
+FI SL +++ + + G + T+N ++ GY + G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 248 -VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
V+ S T V+ L CS L + +V + L + P + L+ G C +
Sbjct: 432 NVNQGSFTSVICL-LCSHLMFDSALRFVGEMLLRNM-SPGGGLLTTLIS--GLCKHGKHS 487
Query: 307 KGV------FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMI 356
K + + D + +++ G G++D A + ++ R D VS+ +I
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 357 DGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID--KNK 414
G EA EM +KPD +T ++ ++ +E E ++ + D +N
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE--EAIQFWDDCKRNG 605
Query: 415 INNDTFIGSALIDMYFKCGNVEKARKTFKEMH----QKDKFIWTAMIVGLAINGHGEEAL 470
+ D + S +ID K E+ ++ F EM Q + ++ +I +G AL
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 471 TMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDL 530
+ +M I+P+ TY ++ + VE+ + F M ++ G++PNV HY ++D
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDG 724
Query: 531 LSRAGHLKEALDVILNM---PVKPNSIVWGSLLGACRVHKNVE-----LAEMAAKQII 580
+ G + + ++ M V PN I + ++G NV L EM K I+
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 170/429 (39%), Gaps = 57/429 (13%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
P+V ++N +I + I + LM++ + S T+ L+KG+ + + L
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 174 LDHAVKLGLDSN---------------------LFVQKAFIHLFS---------LCGL-- 201
L + +G + N FV + + S + GL
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 202 -------VDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVT 254
++L + N G + T N +L G G + V+
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 255 LVLILSACSKLTDLAGGNYVYQYLTEGI---VEPNLVMENVLLDMFGACGEMDAAKGVFD 311
++S C L + + +L E + ++P+ ++L+ +++ A +D
Sbjct: 543 YNTLISGCCGKKKL---DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 312 NMKTR----DVISWTSIVSGFANTGQIDLARKYFDQMPERDY----VSWTAMIDGYLRMN 363
+ K DV +++ ++ G + + +++FD+M ++ V + +I Y R
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
AL L +M+ + P+ T S++ + + +E + + + + + F +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKD----KFIWTAMIVGLAINGHGEEALTMFSNMIES 479
ALID Y K G + K +EMH K+ K +T MI G A +G+ EA + + M E
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 480 SITPDDITY 488
I PD ITY
Sbjct: 780 GIVPDSITY 788
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 120/304 (39%), Gaps = 41/304 (13%)
Query: 150 DSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF 209
D ++ L+ G L + LD VK GL + + I CGL F
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-----CGL-------F 586
Query: 210 NMGDAWEVVT-WNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDL 268
NM E + W+ G+ P+ T +++ C K
Sbjct: 587 NMNKVEEAIQFWD--------------------DCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 269 AGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDV----ISWTSI 324
G + + V+PN V+ N L+ + G + A + ++MK + + ++TS+
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 325 VSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHV 380
+ G + +++ A+ F++M E + +TA+IDGY ++ + L REM +V
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 381 KPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARK 440
P++ T ++ A G + + + + I D+ I Y K G V +A K
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Query: 441 TFKE 444
E
Sbjct: 807 GSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 219/538 (40%), Gaps = 45/538 (8%)
Query: 78 GLSSDP-VFGNKVIAFCCTQESGDVDYARQVFDTIPH----PSVFIWNTMIKGYSRISCP 132
G+S D +F + AFC + G V+ A ++F + P+V +NT+I G
Sbjct: 255 GVSPDVYLFTTAINAFC---KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 133 KSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQK-- 190
M+ ++P T+ L+KG T + +L K G N+ V
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 191 --AFIHLFSLCGLVDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXG- 247
+FI SL +++ + + G + T+N ++ GY + G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 248 -VSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAA 306
V+ S T V+ L CS L + +V + L + P + L+ G C +
Sbjct: 432 NVNQGSFTSVICL-LCSHLMFDSALRFVGEMLLRNM-SPGGGLLTTLIS--GLCKHGKHS 487
Query: 307 KGV------FDNMKTRDVISWTSIVSGFANTGQIDLARKYFDQMPER----DYVSWTAMI 356
K + + D + +++ G G++D A + ++ R D VS+ +I
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 357 DGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYID--KNK 414
G EA EM +KPD +T ++ ++ +E E ++ + D +N
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE--EAIQFWDDCKRNG 605
Query: 415 INNDTFIGSALIDMYFKCGNVEKARKTFKEMH----QKDKFIWTAMIVGLAINGHGEEAL 470
+ D + S +ID K E+ ++ F EM Q + ++ +I +G AL
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 471 TMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDL 530
+ +M I+P+ TY ++ + VE+ + F M ++ G++PNV HY ++D
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDG 724
Query: 531 LSRAGHLKEALDVILNM---PVKPNSIVWGSLLGACRVHKNVE-----LAEMAAKQII 580
+ G + + ++ M V PN I + ++G NV L EM K I+
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 170/429 (39%), Gaps = 57/429 (13%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
P+V ++N +I + I + LM++ + S T+ L+KG+ + + L
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 174 LDHAVKLGLDSN---------------------LFVQKAFIHLFS---------LCGL-- 201
L + +G + N FV + + S + GL
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 202 -------VDLAHKIFNMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVT 254
++L + N G + T N +L G G + V+
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 255 LVLILSACSKLTDLAGGNYVYQYLTEGI---VEPNLVMENVLLDMFGACGEMDAAKGVFD 311
++S C L + + +L E + ++P+ ++L+ +++ A +D
Sbjct: 543 YNTLISGCCGKKKL---DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 312 NMKTR----DVISWTSIVSGFANTGQIDLARKYFDQMPERDY----VSWTAMIDGYLRMN 363
+ K DV +++ ++ G + + +++FD+M ++ V + +I Y R
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 364 HFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGS 423
AL L +M+ + P+ T S++ + + +E + + + + + F +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 424 ALIDMYFKCGNVEKARKTFKEMHQKD----KFIWTAMIVGLAINGHGEEALTMFSNMIES 479
ALID Y K G + K +EMH K+ K +T MI G A +G+ EA + + M E
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 480 SITPDDITY 488
I PD ITY
Sbjct: 780 GIVPDSITY 788
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 120/304 (39%), Gaps = 41/304 (13%)
Query: 150 DSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIF 209
D ++ L+ G L + LD VK GL + + I CGL F
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-----CGL-------F 586
Query: 210 NMGDAWEVVT-WNVMLSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDL 268
NM E + W+ G+ P+ T +++ C K
Sbjct: 587 NMNKVEEAIQFWD--------------------DCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 269 AGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDV----ISWTSI 324
G + + V+PN V+ N L+ + G + A + ++MK + + ++TS+
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 325 VSGFANTGQIDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFREALALFREMQMSHV 380
+ G + +++ A+ F++M E + +TA+IDGY ++ + L REM +V
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 381 KPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARK 440
P++ T ++ A G + + + + I D+ I Y K G V +A K
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Query: 441 TFKE 444
E
Sbjct: 807 GSDE 810
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 214/512 (41%), Gaps = 32/512 (6%)
Query: 57 LLERCKSTYQLKQIHSKTIKMGLSSDPVFGNKVI-AFC-CTQESGDVDYARQVFDTIPHP 114
L R + ++ L I K +K+G V N ++ FC + S V Q+ + P
Sbjct: 110 LCRRSQLSFAL-AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTN----DMALKYG 170
+ T++ G + + +++ M+ +PD T+ ++ G D+AL
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN-- 226
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIHLFSLCGL--VDLAHKIF----NMGDAWEVVTWNVML 224
LL+ K +++++ + I SLC VD A +F N G +V T++ ++
Sbjct: 227 --LLNKMEKGKIEADVVIYSTVID--SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 225 SGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVE 284
S ++PN VT ++ A +K L ++ + + ++
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 285 PNLVMENVLLDMFGACGEMDAAKGVFDNMKTRD----VISWTSIVSGFANTGQIDLARKY 340
PN+V N L++ F +D A+ +F M ++D V+++ ++++GF ++ +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 341 FDQMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAH 396
F M R + V++T +I G+ + + A +F++M V P+ T ++L
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 397 LGALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFI 452
G LE V Y+ K+K+ D + + + + K G VE F + K D
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 453 WTAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMT 512
+ MI G G EEA T+F M E PD TY ++ A G + M
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Query: 513 IQHGIKPNVTHYGCMVDLLSRAGHLKEALDVI 544
+ + YG + D+L K L+V+
Sbjct: 583 -SCRFAGDASTYGLVTDMLHDGRLDKGFLEVL 613
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 202/472 (42%), Gaps = 30/472 (6%)
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIK----PDSFTFPFLLKGFTNDMALKYG 170
+++ +N MI C +S +S L +L +K P T LL GF + +
Sbjct: 99 NLYTYNIMINCL----CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 171 KVLLDHAVKLGLDSNLFVQKAFIH-LFS---LCGLVDLAHKIFNMGDAWEVVTWNVMLSG 226
L+D V++G + +H LF V L ++ G ++VT+ +++G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 227 YNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPN 286
+ + + V ++ + K + ++ + + P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 287 LVMENVLLDMFGACGEMDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFD 342
+ + L+ G A + +M R +V+++ S++ FA G++ A K FD
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 343 QMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLG 398
+M +R + V++ ++I+G+ + EA +F M PD T +++
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWT 454
+ G + + + + +T + LI +F+ + + A+ FK+M + +
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 455 AMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQ 514
++ GL NG E+A+ +F + +S + PD TY + AG VE G F S++++
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 515 HGIKPNVTHYGCMVDLLSRAGHLKEALDVILNM----PVKPNSIVWGSLLGA 562
G+KP+V Y M+ + G +EA + + M P+ P+S + +L+ A
Sbjct: 515 -GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTLIRA 564
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 207/493 (41%), Gaps = 27/493 (5%)
Query: 113 HPSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKV 172
+PSV+ N ++ + S S ML I PD TF L+ + + +
Sbjct: 195 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 254
Query: 173 LLDHAVKLGLDSNLFVQKAFIHLFSLCG----LVDLAHKIFNMGDAWEVVTWNVMLSGYN 228
L+ K G + +H + G ++L + + G +V T+N+++
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 314
Query: 229 RVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTD-LAGGNYVYQYLTEGIVEPNL 287
R + PN VT +++ S L + + L+ G+ PN
Sbjct: 315 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL-SPNH 373
Query: 288 VMENVLLDMFGACGEMDAAKGVFDNMKTRDV----ISWTSIVSGFANTGQIDLARKYFDQ 343
V N L+D + G A +F M+ + + +S+ ++ G + DLAR ++ +
Sbjct: 374 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 433
Query: 344 MPERDY----VSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGA 399
M +++T MIDG + EA+ L EM + PD T +++ +G
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 400 LELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEM----HQKDKFIWTA 455
+ + + I + ++ + I S LI + G +++A + ++ M H +D F +
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553
Query: 456 MIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQH 515
++ L G EA M I P+ +++ +++ ++G K F MT +
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT-KV 612
Query: 516 GIKPNVTHYGCMVDLLSRAGHLKEA---LDVILNMPVKPNSIVWGSLLGA-CR---VHKN 568
G P YG ++ L + GHL+EA L + +P +++++ +LL A C+ + K
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Query: 569 VEL-AEMAAKQII 580
V L EM + I+
Sbjct: 673 VSLFGEMVQRSIL 685
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 118/550 (21%), Positives = 202/550 (36%), Gaps = 118/550 (21%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGI--SMYLL--MLAHNIKPDSFTFPFLLKGFTNDMALKY 169
P V +N +I + C + S YL+ M P T+ +L + K
Sbjct: 231 PDVATFNILIN----VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 286
Query: 170 GKVLLDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFNMGDAWEV------VTWNVM 223
LLDH G+D+++ IH LC +A + D + VT+N +
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIH--DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 224 LSGYNRVXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNY------VYQY 277
++G++ G+SPN VT ++ ++ GN+ Y
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG-----HISEGNFKEALKMFYMM 399
Query: 278 LTEGIVEPNLVMENVLLDMFGACGEMDAAKGVFDNMKTRDV----ISWTSIVSGFANTGQ 333
+G+ P+ V VLLD E D A+G + MK V I++T ++ G G
Sbjct: 400 EAKGLT-PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 334 IDLARKYFDQMP----ERDYVSWTAMIDGYLRMNHFR----------------------- 366
+D A ++M + D V+++A+I+G+ ++ F+
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 367 ------------EALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNK 414
EA+ ++ M + D FT ++T+ G + E + +
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 415 INNDTFIGSALIDMYFKCGNVEKARKTFKEM----HQKDKFIWTAMIVGLAINGHGEEA- 469
I +T LI+ Y G KA F EM H F + +++ GL GH EA
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 470 ----------------------------------LTMFSNMIESSITPDDITYIGVLSAC 495
+++F M++ SI PD TY ++S
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 496 THAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAG------HLKEALDVILNMP- 548
G F + + PN Y C VD + +AG + +E +D + + P
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Query: 549 -VKPNSIVWG 557
V N+++ G
Sbjct: 759 IVTTNAMIDG 768
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 97/480 (20%), Positives = 193/480 (40%), Gaps = 36/480 (7%)
Query: 118 IWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTND----MALKYGKVL 173
++NT++ + +S++ M+ +I PDS+T+ L+ G +A+ + K
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK-- 712
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGL----VDLAHKIFNMGDAWEVVTWNVMLSGYNR 229
+ + + N + F+ G + ++ N+G ++VT N M+ GY+R
Sbjct: 713 -EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLT-EGIVEPNLV 288
+ PN T ++L SK D++ +Y+ + GI+ L
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 289 MENVLLDMFGACGE--MDAAKGVFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFD 342
+++L G C ++ + R D ++ ++S G+I+ A
Sbjct: 832 CHSLVL---GICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888
Query: 343 QMPER----DYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLG 398
M D + AM+ R + F+E+ + EM + P+ + ++ +G
Sbjct: 889 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948
Query: 399 ALELGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFI-----W 453
++ VK + +KI SA++ KCG ++A + M K K + +
Sbjct: 949 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM-LKMKLVPTIASF 1007
Query: 454 TAMIVGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTI 513
T ++ NG+ EAL + M + D ++Y +++ G + + + M
Sbjct: 1008 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMK- 1066
Query: 514 QHGIKPNVTHYGCMV-DLLSRAGHLKEALDVILNMPVKPNSIVWGSLLGACRVHKNVELA 572
G N T Y ++ LL+R A D+IL + I SL + H+N+++A
Sbjct: 1067 GDGFLANATTYKALIRGLLARETAFSGA-DIILKDLLARGFITSMSL--SQDSHRNLKMA 1123
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 191/471 (40%), Gaps = 34/471 (7%)
Query: 77 MGLSSDPVFGNKVIAFCCTQESGDVDYARQVFDTIPH----PSVFIWNTMIKGYSRISCP 132
+G + P I C + GDV+ AR +F+ + P +N+MI G+ ++
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 133 KSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLLDHAVKLGLDSNLFVQKAF 192
+ + M +PD T+ L+ F L G GL N+
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 193 IHLFSLCGLVDLAHKIF----NMGDAWEVVTWNVMLSGYNRVXXXXXXXXXXXXXXXXGV 248
+ F G++ A K + +G T+ ++ ++ GV
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 249 SPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVMENVLLDMFGACGEMDAAKG 308
N VT ++ + ++ + V PNL N L+ F MD A
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 309 VFDNMKTR----DVISWTSIVSGFANTGQIDLARKYFDQMPE----RDYVSWTAMIDGYL 360
+ + +K R D++ + + + G + +I+ A+ ++M E + + +T ++D Y
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 361 RMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDK-NKINND- 418
+ + E L L EM+ ++ V+++T C + L + V +D N+I+ND
Sbjct: 554 KSGNPTEGLHLLDEMKELDIE------VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 419 -----TFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMIVGLAINGHGEEA 469
I +A+ID K VE A F++M QK D+ +T+++ G G+ EA
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 470 LTMFSNMIESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPN 520
L + M E + D + Y ++ +H ++K R F M I GI P+
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM-IGEGIHPD 717
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 137/352 (38%), Gaps = 52/352 (14%)
Query: 114 PSVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVL 173
P+ + + ++I +I + ML ++ + T+ L+ G + +K + L
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 174 LDHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN----MGDAWEVVTWNVMLSGYNR 229
G+ NL A IH F +D A ++ N G +++ + + G
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 230 VXXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGIVEPNLVM 289
+ G+ NS+ ++ A K + G ++ + E +E +V
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579
Query: 290 ENVLLDMFGACGEMDAAKGV-FDNMKTRD------VISWTSIVSGFANTGQIDLARKYFD 342
VL+D G C +K V + N + D +T+++ G Q++ A F+
Sbjct: 580 FCVLID--GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Query: 343 QMPER----DYVSWTAMIDGYLRMNHFREALALFREMQ-----------------MSH-- 379
QM ++ D ++T+++DG + + EALAL +M +SH
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN 697
Query: 380 ----------------VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKI 415
+ PDE +S+L LG ++ +++Y+ K+++
Sbjct: 698 QLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQL 749
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 174/407 (42%), Gaps = 19/407 (4%)
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLL 174
S + +N + + + M+ M + + P++ FL+ F L + LL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN----MGDAWEVVTWNVMLSGYNRV 230
+ ++ + V + ++ V+ A K+F+ + T+N+++ G V
Sbjct: 162 LQSFEV--EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219
Query: 231 XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEG-IVEPNLVM 289
G P+ VT ++ K +L + +++ + G + P++V
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDV----ISWTSIVSGFANTGQIDLARKYFDQMP 345
++ + G+M A + D+M + +++ +V G+A G++ A + +M
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 346 E----RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALE 401
D V++T++IDGY R+ + L+ EM + P+ FT ++ A + L
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 402 LGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMI 457
+ + I F+ + +ID + K G V +A +EM +K DK +T +I
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG 504
+G + G EA+++F M+ +PD IT +LS AGM ++
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 140/350 (40%), Gaps = 53/350 (15%)
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEPNLVMENVLLDMFGACGEMDA 305
GVSPN+ L ++S+ ++ L ++ L + VE ++ N LL+ ++
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKL---HFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVED 189
Query: 306 AKGVFDN----MKTRDVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMID 357
A +FD D ++ ++ G G+ + A + M E D V++ +I
Sbjct: 190 AMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 358 GYLRMNHFREALALFREMQMSHV-KPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN 416
G+ + N +A +F++++ V PD T S+++ G +
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA------------- 296
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM 476
S+L+D + G + TF ++ G A G A + M
Sbjct: 297 ------SSLLDDMLRLG-IYPTNVTF-----------NVLVDGYAKAGEMLTAEEIRGKM 338
Query: 477 IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
I PD +T+ ++ G V +G + + M + G+ PN Y +++ L
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYSILINALCNENR 397
Query: 537 LKEALDVILNMPVK---PNSIVWGSLL-GACRVHK----NVELAEMAAKQ 578
L +A +++ + K P ++ ++ G C+ K NV + EM K+
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 10/217 (4%)
Query: 371 LFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYF 430
+F M+ V P+ + ++++ A G L + + ++ + ++L++
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL--LLQSFEVEGCCMVVNSLLNTLV 182
Query: 431 KCGNVEKARKTFKEMHQ----KDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
K VE A K F E + D + +I GL G E+AL + M PD +
Sbjct: 183 KLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIV 242
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA---LDV 543
TY ++ + + K + F + P+V Y M+ +AG ++EA LD
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 544 ILNMPVKPNSIVWGSLL-GACRVHKNVELAEMAAKQI 579
+L + + P ++ + L+ G + + + E+ K I
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 174/407 (42%), Gaps = 19/407 (4%)
Query: 115 SVFIWNTMIKGYSRISCPKSGISMYLLMLAHNIKPDSFTFPFLLKGFTNDMALKYGKVLL 174
S + +N + + + M+ M + + P++ FL+ F L + LL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 175 DHAVKLGLDSNLFVQKAFIHLFSLCGLVDLAHKIFN----MGDAWEVVTWNVMLSGYNRV 230
+ ++ + V + ++ V+ A K+F+ + T+N+++ G V
Sbjct: 162 LQSFEV--EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV 219
Query: 231 XXXXXXXXXXXXXXXXGVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEG-IVEPNLVM 289
G P+ VT ++ K +L + +++ + G + P++V
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 290 ENVLLDMFGACGEMDAAKGVFDNMKTRDV----ISWTSIVSGFANTGQIDLARKYFDQMP 345
++ + G+M A + D+M + +++ +V G+A G++ A + +M
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 346 E----RDYVSWTAMIDGYLRMNHFREALALFREMQMSHVKPDEFTMVSILTACAHLGALE 401
D V++T++IDGY R+ + L+ EM + P+ FT ++ A + L
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 402 LGEWVKTYIDKNKINNDTFIGSALIDMYFKCGNVEKARKTFKEMHQK----DKFIWTAMI 457
+ + I F+ + +ID + K G V +A +EM +K DK +T +I
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 458 VGLAINGHGEEALTMFSNMIESSITPDDITYIGVLSACTHAGMVEKG 504
+G + G EA+++F M+ +PD IT +LS AGM ++
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 140/350 (40%), Gaps = 53/350 (15%)
Query: 247 GVSPNSVTLVLILSACSKLTDLAGGNYVYQYLTEGI-VEPNLVMENVLLDMFGACGEMDA 305
GVSPN+ L ++S+ ++ L ++ L + VE ++ N LL+ ++
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKL---HFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVED 189
Query: 306 AKGVFDN----MKTRDVISWTSIVSGFANTGQIDLARKYFDQMP----ERDYVSWTAMID 357
A +FD D ++ ++ G G+ + A + M E D V++ +I
Sbjct: 190 AMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 358 GYLRMNHFREALALFREMQMSHV-KPDEFTMVSILTACAHLGALELGEWVKTYIDKNKIN 416
G+ + N +A +F++++ V PD T S+++ G +
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA------------- 296
Query: 417 NDTFIGSALIDMYFKCGNVEKARKTFKEMHQKDKFIWTAMIVGLAINGHGEEALTMFSNM 476
S+L+D + G + TF ++ G A G A + M
Sbjct: 297 ------SSLLDDMLRLG-IYPTNVTF-----------NVLVDGYAKAGEMLTAEEIRGKM 338
Query: 477 IESSITPDDITYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGH 536
I PD +T+ ++ G V +G + + M + G+ PN Y +++ L
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYSILINALCNENR 397
Query: 537 LKEALDVILNMPVK---PNSIVWGSLL-GACRVHK----NVELAEMAAKQ 578
L +A +++ + K P ++ ++ G C+ K NV + EM K+
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 10/217 (4%)
Query: 371 LFREMQMSHVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNKINNDTFIGSALIDMYF 430
+F M+ V P+ + ++++ A G L + + ++ + ++L++
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL--LLQSFEVEGCCMVVNSLLNTLV 182
Query: 431 KCGNVEKARKTFKEMHQ----KDKFIWTAMIVGLAINGHGEEALTMFSNMIESSITPDDI 486
K VE A K F E + D + +I GL G E+AL + M PD +
Sbjct: 183 KLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIV 242
Query: 487 TYIGVLSACTHAGMVEKGRKFFASMTIQHGIKPNVTHYGCMVDLLSRAGHLKEA---LDV 543
TY ++ + + K + F + P+V Y M+ +AG ++EA LD
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 544 ILNMPVKPNSIVWGSLL-GACRVHKNVELAEMAAKQI 579
+L + + P ++ + L+ G + + + E+ K I
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339