Miyakogusa Predicted Gene
- Lj0g3v0089779.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0089779.1 Non Chatacterized Hit- tr|I1LXQ3|I1LXQ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43146
PE,66.76,0,BRCA2_REPEAT,BRCA2 repeat; Nucleic acid-binding
proteins,Nucleic acid-binding, OB-fold-like; BRCA2 h,CUFF.4845.1
(1065 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G01630.1 | Symbols: BRCA2B, BRCA2(V), ATBRCA2(V) | BRCA2-like... 852 0.0
AT4G00020.1 | Symbols: MEE43, EDA20, BRCA2(IV), BRCA2A | BREAST ... 842 0.0
AT4G00020.2 | Symbols: MEE43, EDA20, BRCA2(IV), BRCA2A | BREAST ... 798 0.0
>AT5G01630.1 | Symbols: BRCA2B, BRCA2(V), ATBRCA2(V) | BRCA2-like B |
chr5:235117-240911 REVERSE LENGTH=1155
Length = 1155
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/1013 (46%), Positives = 639/1013 (63%), Gaps = 41/1013 (4%)
Query: 72 GFG--NSLFKTGSGKRVTISSTGLVRAKTLLGLKEDAVGSTVLSPQHRIGEAHDGKXXXX 129
GFG NSLF+T S K+V +SS GL RAK LLGL+ED L+ + + ++
Sbjct: 162 GFGVPNSLFQTASNKKVNVSSAGLARAKALLGLEEDD-----LNGFNHVNQSSSSLQQHG 216
Query: 130 XXXXXXXXHGVKESCKIMSAVPFQ-SPLVSGRGSSTLENGFEPDTCGAAVKPAPIKFQTA 188
K S P Q VSG+ S L ++K P KFQTA
Sbjct: 217 WSGLKTHEEFDATVVKHHSGTPGQYENYVSGKRSEIL---------NPSLKVPPTKFQTA 267
Query: 189 GGRSLSISNDALRRARXXXXXXXXXXXXXXXXXXXXXXXXPDTRQTNAASPCERSAFSTP 248
GG+SLS+S +AL+RAR + + + S +
Sbjct: 268 GGKSLSVSAEALKRARNLLGDPELGSFFDDVAGGDQFFTPQKDERLSDIAINNGSVNTGY 327
Query: 249 LIHHVTSGNNDKMKSFTYPLQSSRQQTEFSTKFLCEGNGDNLIMKFDAVGNEKVSSRKSS 308
+ H + N SF PL SS +Q S +G NLI KFD +E + S
Sbjct: 328 IAHEEKTSNKHTSNSFVSPLHSSSKQFR-SVNLENLASGGNLIKKFDTAVDETNCALNIS 386
Query: 309 NVGGKKPLHDRNERADQAAYHSSLTGFSSKIDSCGVPVGGRPLVDISNTINTAHPNNRLP 368
++R +D A +S GF + G P +PLVDI+N +TA+ NN+
Sbjct: 387 KPATHGLSNNRPLASDMAVNNSKGNGFIPRARQLGRP-ADQPLVDITNRRDTAYANNKQD 445
Query: 369 ASGKRRLGLRVIASPFKKPRNSQVFADQEVENFPNASGAS--EC-----KKKVSTRYPFQ 421
++ K+RLG V SPFK+PR S + +SG S C KK +STRYP +
Sbjct: 446 STQKKRLGKTVSVSPFKRPRISSFKTPLKKNAQQASSGLSVVSCDTLTSKKVLSTRYPEK 505
Query: 422 YPRMHIKDYFAVPP--LQQEVHFPNPVGQVTSGNAEKYMFCDGSGNNGMGAEAFVNLLAQ 479
PR++IK++F + P + + P+ V ++ S NA+KY+FCD S +N +GAE F+ +LA+
Sbjct: 506 SPRVYIKEFFGMHPTATTRMDYVPDHVRRIKSSNADKYVFCDESSSNKVGAETFLQMLAE 565
Query: 480 HGTSLHFASKEWVLNHYKWIVWKLACYERCNPAKHAGKFLTVSNVLEELKYRYEREVNHG 539
G SL AS++WV NHY+WIVWKLACY+ PAK G FLT++NVLEELKYRYEREVNHG
Sbjct: 566 SGASLQHASRKWVTNHYRWIVWKLACYDIYYPAKCRGNFLTITNVLEELKYRYEREVNHG 625
Query: 540 HRSTIKKILEGDALPSAMMILCISRIHSDHVPESGSLFETRTGDQRKETVEIELTDGWYS 599
H S IK+IL GDA S+MM+LCIS I+ P + + + V++ELTDGWYS
Sbjct: 626 HCSAIKRILSGDAPASSMMVLCISAIN----PRTDNGSQEAHCSDNCSNVKVELTDGWYS 681
Query: 600 INAILDIPLSKQRAAGRLFVGQKLRIWGAGLCGWNEPVSPLE--VSSTVRLSLHINGTYR 657
+NA LD+ L+KQ AG+LFVGQKLRI GAGL GW P SPLE +SST+ L L+INGTYR
Sbjct: 682 MNAALDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTSPLEAVISSTICLLLNINGTYR 741
Query: 658 AHWAERLGFCKVAGPPLAFRCIKSNGGLIPQTLAGITRIYPILYKERLSSGRSVVISERM 717
AHWA+RLGFCK G PLAF CIK NGG +P+TLAGITRIYPILYKERL +S+V SER+
Sbjct: 742 AHWADRLGFCKEIGVPLAFNCIKCNGGPVPKTLAGITRIYPILYKERLGEKKSIVRSERI 801
Query: 718 ENKMMELYNQRRSAVIDSIVSEHQKERRGSHIYDDSES-EGAKIYKMLETAEEPEFLMAD 776
E+++++L+NQRRSA+++ I+ E+Q+ G H +D++S EGAK++K+LETA EPE LMA+
Sbjct: 802 ESRIIQLHNQRRSALVEGIMCEYQRGINGVHSQNDTDSEEGAKVFKLLETAAEPELLMAE 861
Query: 777 MSPEQLSSFSAYKAKLNAIRQSKMENSIEKSLQDAGLRHREVTQFMRLRIVGLT--YKNG 834
MS EQL+SF+ YKAK A +Q +ME S+ K+L+DAGL R VT FMR+R+VGLT G
Sbjct: 862 MSLEQLTSFTTYKAKFEAAKQMQMEKSVAKALEDAGLGERNVTPFMRIRLVGLTSLSNEG 921
Query: 835 QDKPKEGIVTIWNPTEKQRQELIEGEAYVISGLIPSGSDLDNLQLQTKGSSTKWLPLSSN 894
+ PKEGIVTIW+PTE+QR EL EG+ Y++ GL+P SD + L L +GSS++W PLS
Sbjct: 922 EHNPKEGIVTIWDPTERQRTELTEGKIYIMKGLVPMNSDSETLYLHARGSSSRWQPLSPK 981
Query: 895 SREQFKPFFSNRQSIPLSSLTDIPLSNEFDVAAYVVHVGEVYQSSQQKKQWIFVSDGSMY 954
E F+PFF+ R+ I LS+L +IPLS+EFD+AAYVV+VG+ Y QKKQW+FV+DGS
Sbjct: 982 DSENFQPFFNPRKPISLSNLGEIPLSSEFDIAAYVVYVGDAYTDVLQKKQWVFVTDGSTQ 1041
Query: 955 GLQSEKLTNTLLAICFCSPLIDHDSFPPINYNLAGSTVGFCNLIKKEKDHTNHVWVADAT 1014
S +++N+LLAI F +P +D S I++NL GS VGFCNLIK+ KD TN +WVA+ T
Sbjct: 1042 --HSGEISNSLLAISFSTPFMDDSSVSHISHNLVGSVVGFCNLIKRAKDATNEMWVAETT 1099
Query: 1015 ESSTYYLNFDSPYCSHLRNAASSVRAWAS--NSSLTIEKLKEKVLLMIGDSRT 1065
E+S Y++N ++ Y SHL+ ++ ++ WA +S I +L+++VL +IG ++
Sbjct: 1100 ENSVYFINAEAAYSSHLKTRSAHIQTWAKLYSSKSVIHELRQRVLFIIGACKS 1152
>AT4G00020.1 | Symbols: MEE43, EDA20, BRCA2(IV), BRCA2A | BREAST
CANCER 2 like 2A | chr4:4107-10364 REVERSE LENGTH=1151
Length = 1151
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/1017 (46%), Positives = 647/1017 (63%), Gaps = 53/1017 (5%)
Query: 72 GFG--NSLFKTGSGKRVTISSTGLVRAKTLLGLKEDAV-GSTVLSPQHRIGEAH--DGKX 126
GFG NSLF+T S K+V +SS GL RAK LLGL+ED + G ++ + H G
Sbjct: 162 GFGVSNSLFQTASNKKVNVSSAGLARAKALLGLEEDDLNGFNHVNQSSSSSQQHGWSGLK 221
Query: 127 XXXXXXXXXXXHGVKESCKIMSAVPFQ-SPLVSGRGSSTLENGFEPDTCGAAVKPAPIKF 185
H S P Q VSG+ S L ++K P KF
Sbjct: 222 THEEFDATVVKH--------HSGTPGQYEDYVSGKRSEVL---------NPSLKVPPTKF 264
Query: 186 QTAGGRSLSISNDALRRARXXXXXXXXXXXXXXXXXXXXXXXXPDTRQTNAASPCERSAF 245
QTAGG+SLS+S +AL+RAR + + + SA
Sbjct: 265 QTAGGKSLSVSAEALKRARNLLGDPELGSFFDDVAGGDQFFTPEKDERLSDIAINNGSAN 324
Query: 246 STPLIHHVTSGNNDKMKSFTYPLQSSRQQTEFSTKFLCE-GNGDNLIMKFDAVGNEKVSS 304
+ H + N SF PL SS +Q FS+ L +G NLI KFDA +E +
Sbjct: 325 RGYIAHEEKTSNKHTPNSFVSPLWSSSKQ--FSSVNLENLASGGNLIKKFDAAVDETDCA 382
Query: 305 RKSSNVGGKKPLHDRNERADQAAYHSSLTGFSSKIDSCGVPVGGRPLVDISNTINTAHPN 364
+++ ++R+ +D A +S + GF + G P +PLVDI+N +TA+
Sbjct: 383 LNATHGLS----NNRSLASDMAVNNSKVNGFIPRGRQPGRP-ADQPLVDITNRRDTAYAY 437
Query: 365 NRLPASGKRRLGLRVIASPFKKPRNSQVFADQEVENFPNASGAS--EC-----KKKVSTR 417
N+ ++ K+RLG V SPFK+PR S + +SG S C KK +STR
Sbjct: 438 NKQDSTQKKRLGKTVSVSPFKRPRISSFKTPSKKHALQASSGLSVVSCDTLTSKKVLSTR 497
Query: 418 YPFQYPRMHIKDYFAVPPL--QQEVHFPNPVGQVTSGNAEKYMFCDGSGNNGMGAEAFVN 475
YP + PR++IKD+F + P + + P+ V ++ S NA+KY+FCD S +N +GAE F+
Sbjct: 498 YPEKSPRVYIKDFFGMHPTATTRMDYVPDHVRRIKSSNADKYVFCDESSSNKVGAETFLQ 557
Query: 476 LLAQHGTSLHFASKEWVLNHYKWIVWKLACYERCNPAKHAGKFLTVSNVLEELKYRYERE 535
+LA+ G SL AS++WV NHY+WIVWKLACY+ PAK G FLT++NVLEELKYRYERE
Sbjct: 558 MLAESGASLQHASRKWVTNHYRWIVWKLACYDIYYPAKCRGNFLTITNVLEELKYRYERE 617
Query: 536 VNHGHRSTIKKILEGDALPSAMMILCISRIHSDHVPESGSLFETRTGDQRKETVEIELTD 595
VNHGH S IK+IL GDA S+MM+LCIS I+ P++ + + V++ELTD
Sbjct: 618 VNHGHCSAIKRILSGDAPASSMMVLCISAIN----PKTDNDSQEAHCSDSCSNVKVELTD 673
Query: 596 GWYSINAILDIPLSKQRAAGRLFVGQKLRIWGAGLCGWNEPVSPLE--VSSTVRLSLHIN 653
GWYS+NA LD+ L+KQ AG+LFVGQKLRI GAGL GW P SPLE +SST+ L L+IN
Sbjct: 674 GWYSMNAALDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTSPLEAVISSTICLLLNIN 733
Query: 654 GTYRAHWAERLGFCKVAGPPLAFRCIKSNGGLIPQTLAGITRIYPILYKERLSSGRSVVI 713
GTYRAHWA+RLGFCK G PLA CIK NGG +P+TLAGI RIYPILYKERL +S+V
Sbjct: 734 GTYRAHWADRLGFCKEIGVPLALNCIKCNGGPVPKTLAGIKRIYPILYKERLGEKKSIVR 793
Query: 714 SERMENKMMELYNQRRSAVIDSIVSEHQKERRGSHIYDDSES-EGAKIYKMLETAEEPEF 772
SER+E+++++L+NQRRSA+++ I+ E+Q+ G H +D++S EGAKI+K+LETA EPEF
Sbjct: 794 SERIESRIIQLHNQRRSALVEGIMCEYQRGINGVHSQNDTDSEEGAKIFKLLETAAEPEF 853
Query: 773 LMADMSPEQLSSFSAYKAKLNAIRQSKMENSIEKSLQDAGLRHREVTQFMRLRIVGLTYK 832
LMA+MSPEQL SF+ YKAK A +Q + E S+ ++L+DAGL R VT FMR+R+VGLT
Sbjct: 854 LMAEMSPEQLRSFTTYKAKFEAAQQMRKEKSVAETLEDAGLGERNVTPFMRIRLVGLTSL 913
Query: 833 N--GQDKPKEGIVTIWNPTEKQRQELIEGEAYVISGLIPSGSDLDNLQLQTKGSSTKWLP 890
+ G+ PKEGIVTIW+PTE+QR EL EG+ Y++ GL+P SD + L L +GSS++W P
Sbjct: 914 SYEGEHNPKEGIVTIWDPTERQRTELTEGKIYMMKGLVPINSDSEILYLHARGSSSRWQP 973
Query: 891 LSSNSREQFKPFFSNRQSIPLSSLTDIPLSNEFDVAAYVVHVGEVYQSSQQKKQWIFVSD 950
LS E F+PFF+ R+ I LS+L +IPLS+EFD+AAYVV+VG Y QKKQW+FV+D
Sbjct: 974 LSPKDSENFQPFFNPRKPISLSNLGEIPLSSEFDIAAYVVYVGNAYTDVLQKKQWVFVTD 1033
Query: 951 GSMYGLQSEKLTNTLLAICFCSPLIDHDSFPPINYNLAGSTVGFCNLIKKEKDHTNHVWV 1010
GS S +++N+LLAI F + +D S I++NL GS VGFCNLIK+ KD TN +WV
Sbjct: 1034 GS--AQHSGEISNSLLAISFSTSFMDDSSVSHISHNLVGSVVGFCNLIKRAKDVTNEIWV 1091
Query: 1011 ADATESSTYYLNFDSPYCSHLRNAASSVRAWA--SNSSLTIEKLKEKVLLMIGDSRT 1065
A+A E+S Y++N ++ Y SHL+ +++ ++ WA S+S I +L+++VL +IG ++
Sbjct: 1092 AEAAENSVYFINAEAAYSSHLKTSSAHIQTWAKLSSSKSVIHELRQRVLSIIGACKS 1148
>AT4G00020.2 | Symbols: MEE43, EDA20, BRCA2(IV), BRCA2A | BREAST
CANCER 2 like 2A | chr4:2895-10364 REVERSE LENGTH=1187
Length = 1187
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/992 (46%), Positives = 621/992 (62%), Gaps = 56/992 (5%)
Query: 72 GFG--NSLFKTGSGKRVTISSTGLVRAKTLLGLKEDAV-GSTVLSPQHRIGEAH--DGKX 126
GFG NSLF+T S K+V +SS GL RAK LLGL+ED + G ++ + H G
Sbjct: 162 GFGVSNSLFQTASNKKVNVSSAGLARAKALLGLEEDDLNGFNHVNQSSSSSQQHGWSGLK 221
Query: 127 XXXXXXXXXXXHGVKESCKIMSAVPFQ-SPLVSGRGSSTLENGFEPDTCGAAVKPAPIKF 185
H S P Q VSG+ S L ++K P KF
Sbjct: 222 THEEFDATVVKH--------HSGTPGQYEDYVSGKRSEVL---------NPSLKVPPTKF 264
Query: 186 QTAGGRSLSISNDALRRARXXXXXXXXXXXXXXXXXXXXXXXXPDTRQTNAASPCERSAF 245
QTAGG+SLS+S +AL+RAR + + + SA
Sbjct: 265 QTAGGKSLSVSAEALKRARNLLGDPELGSFFDDVAGGDQFFTPEKDERLSDIAINNGSAN 324
Query: 246 STPLIHHVTSGNNDKMKSFTYPLQSSRQQTEFSTKFLCE-GNGDNLIMKFDAVGNEKVSS 304
+ H + N SF PL SS +Q FS+ L +G NLI KFDA +E +
Sbjct: 325 RGYIAHEEKTSNKHTPNSFVSPLWSSSKQ--FSSVNLENLASGGNLIKKFDAAVDETDCA 382
Query: 305 RKSSNVGGKKPLHDRNERADQAAYHSSLTGFSSKIDSCGVPVGGRPLVDISNTINTAHPN 364
+++ ++R+ +D A +S + GF + G P +PLVDI+N +TA+
Sbjct: 383 LNATHGLS----NNRSLASDMAVNNSKVNGFIPRGRQPGRP-ADQPLVDITNRRDTAYAY 437
Query: 365 NRLPASGKRRLGLRVIASPFKKPRNSQVFADQEVENFPNASGAS--EC-----KKKVSTR 417
N+ ++ K+RLG V SPFK+PR S + +SG S C KK +STR
Sbjct: 438 NKQDSTQKKRLGKTVSVSPFKRPRISSFKTPSKKHALQASSGLSVVSCDTLTSKKVLSTR 497
Query: 418 YPFQYPRMHIKDYFAVPPL--QQEVHFPNPVGQVTSGNAEKYMFCDGSGNNGMGAEAFVN 475
YP + PR++IKD+F + P + + P+ V ++ S NA+KY+FCD S +N +GAE F+
Sbjct: 498 YPEKSPRVYIKDFFGMHPTATTRMDYVPDHVRRIKSSNADKYVFCDESSSNKVGAETFLQ 557
Query: 476 LLAQHGTSLHFASKEWVLNHYKWIVWKLACYERCNPAKHAGKFLTVSNVLEELKYRYERE 535
+LA+ + + + WIVWKLACY+ PAK G FLT++NVLEELKYRYERE
Sbjct: 558 MLAESEKVCDRSFEACM-----WIVWKLACYDIYYPAKCRGNFLTITNVLEELKYRYERE 612
Query: 536 VNHGHRSTIKKILEGDALPSAMMILCISRIHSDHVPESGSLFETRTGDQRKETVEIELTD 595
VNHGH S IK+IL GDA S+MM+LCIS I+ P++ + + V++ELTD
Sbjct: 613 VNHGHCSAIKRILSGDAPASSMMVLCISAIN----PKTDNDSQEAHCSDSCSNVKVELTD 668
Query: 596 GWYSINAILDIPLSKQRAAGRLFVGQKLRIWGAGLCGWNEPVSPLE--VSSTVRLSLHIN 653
GWYS+NA LD+ L+KQ AG+LFVGQKLRI GAGL GW P SPLE +SST+ L L+IN
Sbjct: 669 GWYSMNAALDVVLTKQLNAGKLFVGQKLRILGAGLSGWATPTSPLEAVISSTICLLLNIN 728
Query: 654 GTYRAHWAERLGFCKVAGPPLAFRCIKSNGGLIPQTLAGITRIYPILYKERLSSGRSVVI 713
GTYRAHWA+RLGFCK G PLA CIK NGG +P+TLAGI RIYPILYKERL +S+V
Sbjct: 729 GTYRAHWADRLGFCKEIGVPLALNCIKCNGGPVPKTLAGIKRIYPILYKERLGEKKSIVR 788
Query: 714 SERMENKMMELYNQRRSAVIDSIVSEHQKERRGSHIYDDSESE-GAKIYKMLETAEEPEF 772
SER+E+++++L+NQRRSA+++ I+ E+Q+ G H +D++SE GAKI+K+LETA EPEF
Sbjct: 789 SERIESRIIQLHNQRRSALVEGIMCEYQRGINGVHSQNDTDSEEGAKIFKLLETAAEPEF 848
Query: 773 LMADMSPEQLSSFSAYKAKLNAIRQSKMENSIEKSLQDAGLRHREVTQFMRLRIVGLTYK 832
LMA+MSPEQL SF+ YKAK A +Q + E S+ ++L+DAGL R VT FMR+R+VGLT
Sbjct: 849 LMAEMSPEQLRSFTTYKAKFEAAQQMRKEKSVAETLEDAGLGERNVTPFMRIRLVGLTSL 908
Query: 833 N--GQDKPKEGIVTIWNPTEKQRQELIEGEAYVISGLIPSGSDLDNLQLQTKGSSTKWLP 890
+ G+ PKEGIVTIW+PTE+QR EL EG+ Y++ GL+P SD + L L +GSS++W P
Sbjct: 909 SYEGEHNPKEGIVTIWDPTERQRTELTEGKIYMMKGLVPINSDSEILYLHARGSSSRWQP 968
Query: 891 LSSNSREQFKPFFSNRQSIPLSSLTDIPLSNEFDVAAYVVHVGEVYQSSQQKKQWIFVSD 950
LS E F+PFF+ R+ I LS+L +IPLS+EFD+AAYVV+VG Y QKKQW+FV+D
Sbjct: 969 LSPKDSENFQPFFNPRKPISLSNLGEIPLSSEFDIAAYVVYVGNAYTDVLQKKQWVFVTD 1028
Query: 951 GSMYGLQSEKLTNTLLAICFCSPLIDHDSFPPINYNLAGSTVGFCNLIKKEKDHTNHVWV 1010
GS S +++N+LLAI F + +D S I++NL GS VGFCNLIK+ KD TN +WV
Sbjct: 1029 GS--AQHSGEISNSLLAISFSTSFMDDSSVSHISHNLVGSVVGFCNLIKRAKDVTNEIWV 1086
Query: 1011 ADATESSTYYLNFDSPYCSHLRNAASSVRAWA 1042
A+A E+S Y++N ++ Y SHL+ +++ ++ WA
Sbjct: 1087 AEAAENSVYFINAEAAYSSHLKTSSAHIQTWA 1118