Miyakogusa Predicted Gene

Lj0g3v0089739.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0089739.1 tr|F2E2M6|F2E2M6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,68.49,3e-18,BTB,BTB/POZ-like; FAMILY NOT NAMED,NULL; POZ
domain,BTB/POZ fold; Broad-Complex, Tramtrack and Bric
,NODE_65169_length_1420_cov_16.873943.path2.1
         (261 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G04740.1 | Symbols:  | ankyrin repeat family protein | chr2:1...   377   e-105
AT3G06190.1 | Symbols: ATBPM2, BPM2 | BTB-POZ and MATH domain 2 ...    48   6e-06

>AT2G04740.1 | Symbols:  | ankyrin repeat family protein |
           chr2:1657137-1659563 FORWARD LENGTH=578
          Length = 578

 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/237 (76%), Positives = 203/237 (85%)

Query: 8   DDLADVCVRVDRKIFRCHKVILASRSEYFKARLSRMEDFHEGKDALSVDFLPCIEEHDLS 67
           + LADVCVRVD++ F CH+VILASRSEYF+ARLSR+ DFHEGK+ L  D LP +EEHDLS
Sbjct: 335 ESLADVCVRVDKRNFYCHQVILASRSEYFRARLSRVNDFHEGKNGLPGDTLPFLEEHDLS 394

Query: 68  TEAFEKMIEYMYTDALQDINPDQAEEMLDVASRYLLFPLKRAVADVLLPHLEMVSPEELC 127
            EAFEKMIEYMYTD L++INP+QAEE+ DVASRYLLFPLKRAVAD LLPHLE  +P ELC
Sbjct: 395 AEAFEKMIEYMYTDGLKEINPNQAEEIFDVASRYLLFPLKRAVADALLPHLETATPAELC 454

Query: 128 HWLMLADMYGVFKIREYCLDTVACNFETFADTKEFRAMLLTLPPPSGDSSLRTTVPSIPG 187
            WL+L+DMYGV KIREYCLD VACNFE F +T EFRAMLLTLPPPSGDSSLRTTVPS PG
Sbjct: 455 QWLVLSDMYGVLKIREYCLDLVACNFEAFVETHEFRAMLLTLPPPSGDSSLRTTVPSAPG 514

Query: 188 SALNTDQGNLLDDLREKWLEIEAAELDKRDESALQFDKRLEMLMLVAEQEKSSENAD 244
           + + TDQGNLLDDLREKWLE EA ELD RDESAL FDKRL ML+ +AE+EKS   A+
Sbjct: 515 AMMTTDQGNLLDDLREKWLEAEALELDMRDESALIFDKRLAMLVEIAEREKSESEAE 571


>AT3G06190.1 | Symbols: ATBPM2, BPM2 | BTB-POZ and MATH domain 2 |
           chr3:1874577-1876575 REVERSE LENGTH=406
          Length = 406

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 25/165 (15%)

Query: 11  ADVCVRVDRKIFRCHKVILASRSEYFKARLSRMEDFHEGKDALSVDFLPCIEEHDLSTEA 70
           ADV   VD + F  HK++LA+RS  F+A+L            L  +   CI   D+    
Sbjct: 202 ADVTFEVDGETFPAHKLVLAARSAVFRAQLF---------GPLRSENTNCIIIEDVQAPI 252

Query: 71  FEKMIEYMYTDALQD----INPD-------QAEEMLDVASRYLLFPLKRAVADVLLPHLE 119
           F+ ++ ++Y D + D    I  D        A+ +L  A RY L  L+      L    E
Sbjct: 253 FKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHLLAAADRYALERLRTICESKL---CE 309

Query: 120 MVSPEELCHWLMLADMYGVFKIREYCLDTVAC--NFETFADTKEF 162
            +S   +   L LA+ +  F+++  CL  +A   N +   +T  F
Sbjct: 310 GISINTVATTLALAEQHHCFQLKAACLKFIALPENLKAVMETDGF 354