Miyakogusa Predicted Gene
- Lj0g3v0089689.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0089689.1 Non Chatacterized Hit- tr|I1MUF8|I1MUF8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,77.53,0,Arginase/deacetylase,NULL; HDASUPER,Histone deacetylase
superfamily; HISTONE DEACETYLASE,NULL;
HISTO,NODE_59781_length_2227_cov_50.606647.path2.1
(566 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |... 545 e-155
AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |... 532 e-151
AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase... 255 7e-68
AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 | chr5:2456... 249 4e-66
AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of t... 234 9e-62
AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |... 167 2e-41
AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase... 134 2e-31
AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 | h... 98 2e-20
AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 | chr... 94 3e-19
AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone ... 85 1e-16
AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |... 85 2e-16
AT4G09784.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 2e-08
AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 | chr5:137701... 57 2e-08
>AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
chr3:6361605-6365367 FORWARD LENGTH=552
Length = 552
Score = 545 bits (1405), Expect = e-155, Method: Compositional matrix adjust.
Identities = 295/519 (56%), Positives = 349/519 (67%), Gaps = 12/519 (2%)
Query: 46 LQPEAKQKRARVQKELTFXXX--XXXXXXXXXXXXXXXXWXXXXXXXXXXXXXTKWVCKN 103
+ P KRARV +E+TF W KW C N
Sbjct: 39 VAPGVSAKRARVSREMTFEDIYGADALLNDDDDEDDDCDWEPVQAPMEF----VKWCCVN 94
Query: 104 CTGISLSHYDCCMICGEHKDSKIVSRGFFASPFAQDDDSAVVQSNAKDVSSQESAANSST 163
CT + C ICGEHK+S I+ G+ ASPF +D + +++ K S+A SST
Sbjct: 95 CTMSNPGDMVHCCICGEHKESGILRHGYLASPFFKD--TGLIEVEEK--YGGSSSATSST 150
Query: 164 AIGFDERMLLHEEADKKSHPHPERPDXXXXXXXXXXXXGIFPGRCYPIPAREITRKELTT 223
A+GFDERMLLH E + K+ PHPERPD G+FPGRC PI AREIT++EL
Sbjct: 151 AVGFDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQM 210
Query: 224 VHSLEHIDSVEVTSSLLSSYFTADTYANEHSXXXXXXXXXXXXXXXSEIVSGRVKNGFAL 283
VH+ EH+D+V+ TS LL SYFT+DTYANE+S ++I +GRVKNGFAL
Sbjct: 211 VHTSEHVDAVDTTSQLLYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFAL 270
Query: 284 VRPPGHHAGVRNAMGFCLHNNAAVAAMTAQISGARKVLILDWDVHHGNGTQEIFENNPSV 343
VRPPGHHAGVR+AMGFCLHNNAAVAA+ AQ +GA+KVLI+DWDVHHGNGTQEIFE N SV
Sbjct: 271 VRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSV 330
Query: 344 LYISLHRHEGGAFYPGTGAAVEVGSMGAEGYCVNIPWSRGGVGDNDYSFAFQHVVLPIAS 403
LYISLHRHEGG FYPGTGAA EVGS G EGYCVN+PWS GGVGD DY FAFQHVVLPIAS
Sbjct: 331 LYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIAS 390
Query: 404 EFAPDFTIISAGFDAARGDPLGGCDVTPTGYAHMTHMLKGISGGKLLVILEGGYNLRSIS 463
F+PDF IISAGFDAARGDPLG CDVTP GY+ MT ML + GGK+LVILEGGYNLRSIS
Sbjct: 391 AFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSIS 450
Query: 464 SSATAVIKVLLGEDPGRELE-NSFPSKAGIQTVLEVLKIQLNYWPSLGPIFSNLQSQWRM 522
+SATAVIKVLLGE+P EL + PS AG+QTVL+VL IQL +WPSL +S L S+
Sbjct: 451 ASATAVIKVLLGENPENELPIATTPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSELEA 510
Query: 523 YCLGXXXXXXXXXXXXLAPKWWRLGRKSFLFHYLNGHYL 561
+ + P WW+ GRK L+++L+ +
Sbjct: 511 RLIENKKNQMKRKVVRV-PTWWKWGRKKLLYNFLSARMI 548
>AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
chr3:6361605-6365399 FORWARD LENGTH=564
Length = 564
Score = 532 bits (1370), Expect = e-151, Method: Compositional matrix adjust.
Identities = 287/477 (60%), Positives = 333/477 (69%), Gaps = 11/477 (2%)
Query: 46 LQPEAKQKRARVQKELTFXXX--XXXXXXXXXXXXXXXXWXXXXXXXXXXXXXTKWVCKN 103
+ P KRARV +E+TF W KW C N
Sbjct: 39 VAPGVSAKRARVSREMTFEDIYGADALLNDDDDEDDDCDWEPVQAPMEF----VKWCCVN 94
Query: 104 CTGISLSHYDCCMICGEHKDSKIVSRGFFASPFAQDDDSAVVQSNAKDVSSQESAANSST 163
CT + C ICGEHK+S I+ G+ ASPF +D + +++ K S+A SST
Sbjct: 95 CTMSNPGDMVHCCICGEHKESGILRHGYLASPFFKD--TGLIEVEEK--YGGSSSATSST 150
Query: 164 AIGFDERMLLHEEADKKSHPHPERPDXXXXXXXXXXXXGIFPGRCYPIPAREITRKELTT 223
A+GFDERMLLH E + K+ PHPERPD G+FPGRC PI AREIT++EL
Sbjct: 151 AVGFDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQM 210
Query: 224 VHSLEHIDSVEVTSSLLSSYFTADTYANEHSXXXXXXXXXXXXXXXSEIVSGRVKNGFAL 283
VH+ EH+D+V+ TS LL SYFT+DTYANE+S ++I +GRVKNGFAL
Sbjct: 211 VHTSEHVDAVDTTSQLLYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFAL 270
Query: 284 VRPPGHHAGVRNAMGFCLHNNAAVAAMTAQISGARKVLILDWDVHHGNGTQEIFENNPSV 343
VRPPGHHAGVR+AMGFCLHNNAAVAA+ AQ +GA+KVLI+DWDVHHGNGTQEIFE N SV
Sbjct: 271 VRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSV 330
Query: 344 LYISLHRHEGGAFYPGTGAAVEVGSMGAEGYCVNIPWSRGGVGDNDYSFAFQHVVLPIAS 403
LYISLHRHEGG FYPGTGAA EVGS G EGYCVN+PWS GGVGD DY FAFQHVVLPIAS
Sbjct: 331 LYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIAS 390
Query: 404 EFAPDFTIISAGFDAARGDPLGGCDVTPTGYAHMTHMLKGISGGKLLVILEGGYNLRSIS 463
F+PDF IISAGFDAARGDPLG CDVTP GY+ MT ML + GGK+LVILEGGYNLRSIS
Sbjct: 391 AFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSIS 450
Query: 464 SSATAVIKVLLGEDPGRELE-NSFPSKAGIQTVLEVLKIQLNYWPSLGPIFSNLQSQ 519
+SATAVIKVLLGE+P EL + PS AG+QTVL+VL IQL +WPSL +S L S+
Sbjct: 451 ASATAVIKVLLGENPENELPIATTPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLSE 507
>AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase 5
| chr5:24567137-24570917 REVERSE LENGTH=660
Length = 660
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 145/372 (38%), Positives = 198/372 (53%), Gaps = 18/372 (4%)
Query: 158 AANSSTAIG--FDERMLLHEEADKKSHPHPERPDXXXXXXXXXXXXGIFPGRCYPIPARE 215
A N +G +DE M H+ D + HP E PD G+ RC + + +
Sbjct: 20 AGNRQRKVGLIYDETMCKHDTPDGEDHP--ECPDRIRVIWEKLQLAGV-SQRCVVLGSSK 76
Query: 216 ITRKELTTVHSLEHIDSVEVTSSLLSSYF-------TADTYANEHSXXXXXXXXXXXXXX 268
K L VH+ +H++ V+ S+ Y Y N S
Sbjct: 77 AEDKHLQLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAGSVVKL 136
Query: 269 XSEIVSGRVKNGFALVRPPGHHAGVRNAMGFCLHNNAAVAAMTAQIS----GARKVLILD 324
++ G + GFA+VRPPGHHA AMGFCL NN AVAA G +K+LI+D
Sbjct: 137 AEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVD 196
Query: 325 WDVHHGNGTQEIFENNPSVLYISLHRHEGGAFYPG--TGAAVEVGSMGAEGYCVNIPWSR 382
WDVHHGNGTQ++F +P VL+ S+HRHE G FYP G VG EG+ +N+PW +
Sbjct: 197 WDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQ 256
Query: 383 GGVGDNDYSFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGGCDVTPTGYAHMTHMLK 442
G GD DY A+ H+++P+A EF PD +SAGFDAA DPLGGC VTP GY+ M L
Sbjct: 257 GRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKLM 316
Query: 443 GISGGKLLVILEGGYNLRSISSSATAVIKVLLGEDPGRELENSFPSKAGIQTVLEVLKIQ 502
+ GK+++ LEGGYNL SI+ S+ A ++VLL + + ++P ++ + + V K
Sbjct: 317 EFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFESTWRVIQAVRKRL 376
Query: 503 LNYWPSLGPIFS 514
YWPSL S
Sbjct: 377 CTYWPSLADELS 388
>AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 |
chr5:24567137-24570917 REVERSE LENGTH=664
Length = 664
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 198/376 (52%), Gaps = 22/376 (5%)
Query: 158 AANSSTAIG--FDERMLLHEEADKKSHPHPERPDXXXXXXXXXXXXGIFPGRCYPIPARE 215
A N +G +DE M H+ D + HP E PD G+ RC + + +
Sbjct: 20 AGNRQRKVGLIYDETMCKHDTPDGEDHP--ECPDRIRVIWEKLQLAGV-SQRCVVLGSSK 76
Query: 216 ITRKELTTVHSLEHIDSVEVTSSLLSSYF-------TADTYANEHSXXXXXXXXXXXXXX 268
K L VH+ +H++ V+ S+ Y Y N S
Sbjct: 77 AEDKHLQLVHTKDHVNLVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAGSVVKL 136
Query: 269 XSEIVSGRVKNGFALVRPPGHHAGVRNAMGFCLHNNAAVAAMTAQIS----GARKVLILD 324
++ G + GFA+VRPPGHHA AMGFCL NN AVAA G +K+LI+D
Sbjct: 137 AEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVD 196
Query: 325 WDVHHGNGTQEIFENNPSVLYISLHRHEGGAFYPG--TGAAVEVGSMGAEGYCVNIPWSR 382
WDVHHGNGTQ++F +P VL+ S+HRHE G FYP G VG EG+ +N+PW +
Sbjct: 197 WDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQ 256
Query: 383 GGVGDNDYSFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGGCDVTPTGYAHMTHM-- 440
G GD DY A+ H+++P+A EF PD +SAGFDAA DPLGGC VTP GY+ M
Sbjct: 257 GRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKVG 316
Query: 441 --LKGISGGKLLVILEGGYNLRSISSSATAVIKVLLGEDPGRELENSFPSKAGIQTVLEV 498
L + GK+++ LEGGYNL SI+ S+ A ++VLL + + ++P ++ + + V
Sbjct: 317 VELMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEAYPFESTWRVIQAV 376
Query: 499 LKIQLNYWPSLGPIFS 514
K YWPSL S
Sbjct: 377 RKRLCTYWPSLADELS 392
>AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of the
RPD3/HDA1 superfamily 18 | chr5:24571297-24574372
REVERSE LENGTH=682
Length = 682
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 194/368 (52%), Gaps = 20/368 (5%)
Query: 158 AANSSTAIG--FDERMLLHEEADKKSHPHPERPDXXXXXXXXXXXXGIFPGRCYPIPARE 215
A S +G +DE M H+ + K E PD G+ RC + +
Sbjct: 53 AGKSQRKVGLVYDETMCKHDTPNGKVDV--ECPDRIRVIWEKLQLAGV-TQRCVVLGGSK 109
Query: 216 ITRKELTTVHSLEHIDSVEVTSSL--------LSSYFTADTYANEHSXXXXXXXXXXXXX 267
K L VH+ +H++ V+ S+ ++S + Y N S
Sbjct: 110 AEDKHLKLVHTKKHVNLVKSISTKKKDSRRNKIASQLDS-IYLNGGSSEAAYLAAGSVVK 168
Query: 268 XXSEIVSGRVKNGFALVRPPGHHAGVRNAMGFCLHNNAAVAAMTAQIS----GARKVLIL 323
++ G + GFA+VRPPGHHA AMGFCL NN AVAA +K+LI+
Sbjct: 169 VAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIV 228
Query: 324 DWDVHHGNGTQEIFENNPSVLYISLHRHEGGAFYP--GTGAAVEVGSMGAEGYCVNIPWS 381
DWD+HHGNGTQ++F + VL S+HRH+ G+FYP G VG EG+ +N+PW
Sbjct: 229 DWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWE 288
Query: 382 RGGVGDNDYSFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGGCDVTPTGYAHMTHML 441
+GG GD DY + H+++P+ EF PD ++SAGFDAA GDPLGGC VTP GY+ M L
Sbjct: 289 QGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKKL 348
Query: 442 KGISGGKLLVILEGGYNLRSISSSATAVIKVLLGEDPGRELENSFPSKAGIQTVLEVLKI 501
+ GK+++ LEGGYNL S+ S+ A ++VLL + ++P ++ + + V +
Sbjct: 349 MEFAHGKIVLALEGGYNLESLGKSSLACVQVLLEDKQIHGSSETYPLESTRRVIQAVRER 408
Query: 502 QLNYWPSL 509
YWPSL
Sbjct: 409 LCTYWPSL 416
>AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |
chr4:16102774-16105439 REVERSE LENGTH=423
Length = 423
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 119/203 (58%), Gaps = 9/203 (4%)
Query: 280 GFALVRPPGHHAGVRNAMGFCLHNNAAVAAMTAQIS-GARKVLILDWDVHHGNGTQEIFE 338
GFAL+RPPGHHA + MGFC+ N A+AA AQ + G +++ I+D+DVHHGNGT + F
Sbjct: 192 GFALIRPPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFT 251
Query: 339 NNPSVLYISLHRHEGGAFYPGTGAAVEVGSMGAEGYCVNIPWSRGGVGDNDYSFAFQHVV 398
+P + ++S H+ YPGTG ++G EG +N+P GG GD F+ ++
Sbjct: 252 EDPDIFFLSTHQDGS---YPGTGKISDIGKGKGEGTTLNLPLP-GGSGDIAMRTVFEEII 307
Query: 399 LPIASEFAPDFTIISAGFDAARGDPLGGCDVTPTGYAHMT----HMLKGISGGKLLVILE 454
+P A F PD ++SAG+DA DPL T Y + + K + GG+ + LE
Sbjct: 308 VPCAQRFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFLE 367
Query: 455 GGYNLRSISSSATAVIKVLLGED 477
GGYNL S+SSS + LLGED
Sbjct: 368 GGYNLESLSSSVADSFRALLGED 390
>AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase 8
| chr1:2672527-2674469 FORWARD LENGTH=377
Length = 377
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 135/263 (51%), Gaps = 9/263 (3%)
Query: 220 ELTTVHSLEHIDS-VEVTSSLLSSYFTADTYANEHSXXXXXXXXXXXXXXXSEIVSGRVK 278
EL H+ E+I+ VE S A T+ + S I+ K
Sbjct: 74 ELLMFHTSEYIEKLVEADKSGERCEIAAGTFMSPGSWEAALLAAGTTLSAMQHILDCHGK 133
Query: 279 NGFALVRPPGHHAGVRNAMGFCLHNNAAVAAMTAQISGA-RKVLILDWDVHHGNGTQEIF 337
+ALVRPPGHH+ A G+C NNAA+A A SG+ +V ++D DVH+GNGT E F
Sbjct: 134 IAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNGTAEGF 193
Query: 338 ENNPSVLYISLHRHEG--GAFYPGTGAAVEVGSMGAEGYCVNIPWSRGGVGDNDYSFAFQ 395
+ VL +SLH + G G+ +P G+ E+G GY +N+P G GD Y +A
Sbjct: 194 YTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNG-TGDRGYEYAMN 252
Query: 396 HVVLPIASEFAPDFTIISAGFDAARGDPLGGCDVTPTGYAHMTHMLKGI----SGGKLLV 451
+V+P F PD ++ G D++ DP G +T GY + +++G+ S G+LL+
Sbjct: 253 ELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHGRLLM 312
Query: 452 ILEGGYNLRSISSSATAVIKVLL 474
+ EGGY++ + A+++ +L
Sbjct: 313 VQEGGYHVTYAAYCLHAMLEGVL 335
>AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 |
histone deacetylase 6 | chr5:25315834-25318227 REVERSE
LENGTH=471
Length = 471
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 101/194 (52%), Gaps = 5/194 (2%)
Query: 289 HHAGVRNAMGFCLHNNAAVAAMTAQISGARKVLILDWDVHHGNGTQEIFENNPSVLYISL 348
HHA A GFC N+ V + + ++VL +D DVHHG+G +E F V+ +S
Sbjct: 152 HHAKKSEASGFCYVNDI-VLGILELLKMFKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSF 210
Query: 349 HRHEGGAFYPGTGAAVEVGSMGAEGYCVNIPWSRGGVGDNDYSFAFQHVVLPIASEFAPD 408
H+ G F+PGTG +VG+ + Y +N+P + G+ D + F+ ++ + + P+
Sbjct: 211 HKF--GDFFPGTGHIRDVGAEKGKYYALNVPLN-DGMDDESFRSLFRPLIQKVMEVYQPE 267
Query: 409 FTIISAGFDAARGDPLGGCDVTPTGYAHMTHMLKGISGGKLLVILEGGYNLRSISSSATA 468
++ G D+ GD LG +++ G+A L+ + L+V+ GGY +R+++
Sbjct: 268 AVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYN-VPLMVLGGGGYTIRNVARCWCY 326
Query: 469 VIKVLLGEDPGREL 482
V +G +P +L
Sbjct: 327 ETAVAVGVEPDNKL 340
>AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 |
chr3:16226769-16229752 REVERSE LENGTH=426
Length = 426
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 8/205 (3%)
Query: 289 HHAGVRNAMGFCLHNNAAVAAMTAQISGARKVLILDWDVHHGNGTQEIFENNPSVLYISL 348
HHA +A GFC N+ + + + +VL +D DVHHG+G +E F V+ +S
Sbjct: 136 HHAKKCDASGFCYINDLVLGILEL-LKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
Query: 349 HRHEGGAFYPGTGAAVEVGSMGAEGYCVNIPWSRGGVGDNDYSFAFQHVVLPIASEFAPD 408
H+ G F+PGTG E+G + Y +N+P + G+ D+ ++ F+ ++ + + P
Sbjct: 195 HKF-GDKFFPGTGDVKEIGEREGKFYAINVPL-KDGIDDSSFNRLFRTIISKVVEIYQPG 252
Query: 409 FTIISAGFDAARGDPLGGCDVTPTGYAHMTHMLKGISGGKLLVILEGGYNLRSISSSATA 468
++ G D+ D LG +++ G+A +K + LLV GGY +++ T
Sbjct: 253 AIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFN-LPLLVTGGGGYTKENVARCWTV 311
Query: 469 VIKVLLGEDPGRELENSFPSKAGIQ 493
+LL EL N P I+
Sbjct: 312 ETGILL----DTELPNEIPENDYIK 332
>AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone
deacetylase 1 | chr4:17896663-17899057 REVERSE
LENGTH=469
Length = 469
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 289 HHAGVRNAMGFCLHNNAAVAAMTAQISGARKVLILDWDVHHGNGTQEIFENNPSVLYISL 348
HHA A GFC N+ +A + + +VL +D D+HHG+G +E F V+ +S
Sbjct: 148 HHAKKCEASGFCYVNDIVLAILEL-LKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSF 206
Query: 349 HRHEGGAFYPGTGAAVEVGSMGAEGYCVNIPWSRGGVGDNDYSFAFQHVVLPIASEFAPD 408
H+ G ++PGTG ++G + Y +N+P G+ D Y F+ ++ + F P
Sbjct: 207 HKF--GDYFPGTGHIQDIGYGSGKYYSLNVPLD-DGIDDESYHLLFKPIMGKVMEIFRPG 263
Query: 409 FTIISAGFDAARGDPLGGCDVTPTGYAHMTHMLKGIS 445
++ G D+ GD LG +++ G+A ++ +
Sbjct: 264 AVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
>AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |
histone deacetylase 1 | chr4:17896493-17899057 REVERSE
LENGTH=501
Length = 501
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 289 HHAGVRNAMGFCLHNNAAVAAMTAQISGARKVLILDWDVHHGNGTQEIFENNPSVLYISL 348
HHA A GFC N+ +A + + +VL +D D+HHG+G +E F V+ +S
Sbjct: 148 HHAKKCEASGFCYVNDIVLAILEL-LKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSF 206
Query: 349 HRHEGGAFYPGTGAAVEVGSMGAEGYCVNIPWSRGGVGDNDYSFAFQHVVLPIASEFAPD 408
H+ G ++PGTG ++G + Y +N+P G+ D Y F+ ++ + F P
Sbjct: 207 HKF--GDYFPGTGHIQDIGYGSGKYYSLNVPLD-DGIDDESYHLLFKPIMGKVMEIFRPG 263
Query: 409 FTIISAGFDAARGDPLGGCDVTPTGYAHMTHMLKGIS 445
++ G D+ GD LG +++ G+A ++ +
Sbjct: 264 AVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
>AT4G09784.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: histone deacetylase 15
(TAIR:AT3G18520.2); Has 120 Blast hits to 120 proteins
in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr4:6162253-6162613 FORWARD
LENGTH=70
Length = 70
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/42 (57%), Positives = 27/42 (64%)
Query: 180 KSHPHPERPDXXXXXXXXXXXXGIFPGRCYPIPAREITRKEL 221
KSHPHPERPD G+FPGRC PI A EIT++EL
Sbjct: 8 KSHPHPERPDRLRAIAASLDTAGVFPGRCLPINAGEITKQEL 49
>AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 |
chr5:13770121-13771712 REVERSE LENGTH=409
Length = 409
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 289 HHAGVRNAMGFCLHNNAAVAAMTAQISGARKVLILDWDVHHGNGTQEIFENNPSVLYISL 348
HH A GF + N V A+ + ++VL ++ HG+ +E F++ V+ +S
Sbjct: 147 HHVKKDKASGFG-YVNDVVLAILELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSF 205
Query: 349 HRHEGGAFYPGTGAAVEVGSMGAEGYCVNIPWSRGGVGDNDYSFAFQHVVLPIASE---- 404
H+ TG + G + Y +N P + G+ D F+ + + +P+
Sbjct: 206 HK------VGDTGDISDYGEGKGQYYSLNAPL-KDGLDD----FSLRGLFIPVIHRAMEI 254
Query: 405 FAPDFTIISAGFDAARGDPLGGCDVTPTGYAHMTHMLKGISGGKLLVILEGGYNLRSISS 464
+ P+ ++ G D+ GDP G +++ G+ ++ + L+++ GGY L +++
Sbjct: 255 YEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFN-VPLMILGGGGYTLPNVAR 313
Query: 465 SATAVIKVLLGEDPGRELENSFP 487
+ +GE +L+N P
Sbjct: 314 CWCYETAIAVGE----QLDNDLP 332