Miyakogusa Predicted Gene
- Lj0g3v0089069.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0089069.1 Non Chatacterized Hit- tr|B9STP1|B9STP1_RICCO
Pentatricopeptide repeat-containing protein, putative
,24.06,1e-18,PPR,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; PPR_2,Pentatricopepti,CUFF.4786.1
(342 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 208 6e-54
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 4e-50
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 186 2e-47
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 7e-46
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 1e-45
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 179 2e-45
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 178 6e-45
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 175 4e-44
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 7e-44
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 172 2e-43
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 172 2e-43
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 4e-43
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 4e-43
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 5e-43
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 6e-43
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 1e-42
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 169 3e-42
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 4e-42
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 4e-42
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 8e-42
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 8e-42
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 167 1e-41
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 4e-41
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 6e-41
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 7e-41
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 164 8e-41
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 1e-40
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 162 3e-40
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 5e-40
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 7e-40
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 9e-40
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 160 1e-39
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 160 2e-39
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 3e-39
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 3e-39
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 4e-39
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 5e-39
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 5e-39
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 6e-39
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 157 8e-39
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 156 2e-38
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 155 3e-38
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 4e-38
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 6e-38
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 7e-38
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 7e-38
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 154 8e-38
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 9e-38
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 1e-37
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 153 2e-37
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 153 2e-37
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 151 5e-37
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 7e-37
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 9e-37
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 150 1e-36
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 2e-36
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 2e-36
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 5e-36
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 5e-36
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 5e-36
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 6e-36
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 7e-36
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 147 7e-36
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 7e-36
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 8e-36
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 8e-36
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 8e-36
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 147 1e-35
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 2e-35
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 3e-35
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 3e-35
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 4e-35
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 5e-35
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 145 6e-35
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 9e-35
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 9e-35
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 144 1e-34
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 1e-34
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 6e-34
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 141 7e-34
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 2e-33
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 139 2e-33
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 3e-33
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 5e-33
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 5e-33
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 5e-33
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 6e-33
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 7e-33
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 8e-33
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 9e-33
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 1e-32
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 136 2e-32
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 135 3e-32
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 135 5e-32
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 5e-32
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 7e-32
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 1e-31
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 5e-31
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 7e-31
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 1e-30
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 129 2e-30
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 2e-30
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 128 5e-30
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 7e-30
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 7e-30
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 127 1e-29
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 9e-29
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 6e-28
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 9e-27
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 8e-26
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 9e-23
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 8e-19
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 87 1e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 3e-15
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 77 2e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 72 4e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 66 3e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 7e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 65 9e-11
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 62 5e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 60 2e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 3e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 7e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 8e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 57 1e-08
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 57 2e-08
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 57 2e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 3e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 55 6e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 53 2e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 50 2e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 50 2e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 49 4e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 49 4e-06
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 5e-06
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 6e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/339 (60%), Positives = 251/339 (74%), Gaps = 3/339 (0%)
Query: 4 SSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTAL 63
SS Y+++ ++L+ TK ++S+ NQ H+QAL +F +HS+ LPLD HVFSL LKSC A
Sbjct: 2 SSSYASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAA 61
Query: 64 RRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMI 123
RP LG S+HAH+ KS+FLSNPF+ AL+++YG CLS++ AR LFDEIP RN VVWNAMI
Sbjct: 62 FRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMI 121
Query: 124 SLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKP 183
S Y H + A+EL+ MDV PNES+FN II L DG+++AI YR+M+E KP
Sbjct: 122 SHYTHC-GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKP 180
Query: 184 RLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVF 243
LITLLAL+ AC + A LIKEIH Y RN I PHPQL SGL+EAYGRCG +V + VF
Sbjct: 181 NLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVF 240
Query: 244 WKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGF 303
M D+DVV WSSLISAYALHG+A++AL+TF+EME+A V PD I FL VLKACSHAG
Sbjct: 241 DSME--DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGL 298
Query: 304 ADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
AD+AL YF RMQ DYG+ AS DHYSCLVDVLSR GR E
Sbjct: 299 ADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEE 337
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 188/342 (54%), Gaps = 9/342 (2%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHI-HSTLTLPLDPHVFSLVLKSC 60
A+ + ++ + + +I ++ + S + + ++ + + LP D F + KSC
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELP-DRFTFPFMFKSC 119
Query: 61 TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
+L +LG +H H K + +ALI++Y L A +FDE+ R+ + WN
Sbjct: 120 ASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWN 179
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF-KAIALYRRMLEL 179
+++S YA + A LFHLM + ++ +I+ G + +A+ +R M
Sbjct: 180 SLLSGYAR-LGQMKKAKGLFHLM-LDKTIVSWTAMISGYTGI--GCYVEAMDFFREMQLA 235
Query: 180 ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNS 239
++P I+L+++LP+C + +L L K IH Y R + + + LIE Y +CG + +
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQA 295
Query: 240 RNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
+F +M KDV+ WS++IS YA HG A A+ETF EM+ A VKP+GITFLG+L ACS
Sbjct: 296 IQLFGQMEG--KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACS 353
Query: 300 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
H G + L YF M++DY +E +HY CL+DVL+RAG+L
Sbjct: 354 HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLE 395
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 14/238 (5%)
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
+ ASI H S F+ + +++ + A LF+++ + N ++N++I Y
Sbjct: 29 INASIIIHGLSQS----SFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 84
Query: 128 HSP---DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPR 184
H+ D + +L P+ TF P + A + ++ + + +
Sbjct: 85 HNSLYCDVIRIYKQLLRKSFELPDRFTF-PFMFKSCASLGSCYLGKQVHGHLCKFGPRFH 143
Query: 185 LITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFW 244
++T AL+ + L ++ D++ L SG Y R G + ++ +F
Sbjct: 144 VVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSG----YARLGQMKKAKGLFH 199
Query: 245 KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
M +DK +V W+++IS Y G A++ F+EM++AG++PD I+ + VL +C+ G
Sbjct: 200 LM--LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLG 255
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 170/299 (56%), Gaps = 16/299 (5%)
Query: 52 VFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLS-LTSARHLFDE 110
++ LVLKS L F +H H KS F + +AL++ Y +S +T AR LFDE
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDE 187
Query: 111 IPHRNEVVWNAMISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAF 167
+ RN V W AM+S YA S D + A+ LF M DVP ++N I+AA QN
Sbjct: 188 MSERNVVSWTAMLSGYARSGD-ISNAVALFEDMPERDVP----SWNAILAA-CTQNGLFL 241
Query: 168 KAIALYRRML-ELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGL 226
+A++L+RRM+ E ++P +T++ +L AC L L K IH + R D+ + + L
Sbjct: 242 EAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSL 301
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM---EMAG 283
++ YG+CG L + +VF KM K + W+S+I+ +ALHG ++ A+ F+EM +
Sbjct: 302 VDLYGKCGNLEEASSVF-KMAS-KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIND 359
Query: 284 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+KPD ITF+G+L AC+H G YF M +G+E +HY CL+D+L RAGR E
Sbjct: 360 IKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDE 418
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 182/357 (50%), Gaps = 37/357 (10%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+I S+VN + + + VF + P D + F VLK+C+ +G IH A K
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRP-DHYTFPCVLKACSCSGTIVIGRKIHGSATKV 169
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSP---DSLPAA 136
S F+ + L+++YG C L+ AR + DE+ R+ V WN+++ YA + D+L
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 137 LEL------------FHLMDVPPNESTFN-------------------PIIAALAAQNDG 165
E+ L+ N +T N ++ + +N
Sbjct: 230 REMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAM 289
Query: 166 AFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG 225
+A+ LY RM +P +++ ++LPAC + +AL+L K+IHGY R ++P+ L +
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
LI+ Y +CGCL +R+VF M+ +DVV W+++ISAY G A+ F +++ +G+
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKS--RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Query: 286 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
PD I F+ L ACSHAG ++ F M Y + +H +C+VD+L RAG++ E
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Query: 177 LELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL 236
LEL+ K T+ L + ++ +H I D+ + LG L+ AY +
Sbjct: 31 LELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDV 90
Query: 237 VNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 296
++R VF ++ + ++V++ + +I +Y +G ++ F M V+PD TF VLK
Sbjct: 91 ASARKVFDEIPE--RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 297 ACSHAG 302
ACS +G
Sbjct: 149 ACSCSG 154
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 168/318 (52%), Gaps = 26/318 (8%)
Query: 26 NQSRHD-QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSN 84
+Q+ HD +AL +F + + L + + V+ +C +IH K +
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439
Query: 85 PFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD 144
F+ + L+++Y + A +F ++ R+ V WN MI+ Y S A L L + +
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 145 VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLI 204
+ S GA + + LKP ITL+ +LP+C ++AL
Sbjct: 500 LERKVSK-------------GASR----------VSLKPNSITLMTILPSCAALSALAKG 536
Query: 205 KEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYA 264
KEIH Y I+N++ +GS L++ Y +CGCL SR VF ++ K+V+ W+ +I AY
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ--KNVITWNVIIMAYG 594
Query: 265 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 324
+HG + A++ + M + GVKP+ +TF+ V ACSH+G D+ L F M+ DYGVE SS
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 325 DHYSCLVDVLSRAGRLHE 342
DHY+C+VD+L RAGR+ E
Sbjct: 655 DHYACVVDLLGRAGRIKE 672
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 42/289 (14%)
Query: 16 YFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAH 75
++ L+ S V + +A+ + + L + D + F +LK+ L+ LG IHAH
Sbjct: 64 WWIDLLRSKVRSNLLREAVLTYVDM-IVLGIKPDNYAFPALLKAVADLQDMELGKQIHAH 122
Query: 76 AAKSSF-LSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLP 134
K + + + +A+ L+NLY C + +FD I RN+V WN++IS S +
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC-SFEKWE 181
Query: 135 AALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
ALE F R ML+ ++P TL++++ A
Sbjct: 182 MALEAF---------------------------------RCMLDENVEPSSFTLVSVVTA 208
Query: 195 CVNV---AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
C N+ L + K++H YG+R + + + L+ YG+ G L +S+ + +
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGG--R 265
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
D+V W++++S+ + + ALE +EM + GV+PD T VL ACSH
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 51/286 (17%)
Query: 29 RHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPFLGASIHAHAAKSSFL-SNP 85
+++Q L ++ + ++P F++ VL +C+ L G +HA+A K+ L N
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 86 FIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDV 145
F+ SAL+++Y +C + S R +FD + R +WNAMI+ Y
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY------------------- 379
Query: 146 PPNESTFNPIIAALAAQNDGAFKAIALYRRMLE-LELKPRLITLLALLPACVNVAALNLI 204
+QN+ +A+ L+ M E L T+ ++PACV A +
Sbjct: 380 ---------------SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 205 KEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYA 264
+ IHG+ ++ + + + L++ Y R G + + +F KM D+D+V W+++I+ Y
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME--DRDLVTWNTMITGYV 482
Query: 265 L---HGEAKAALETFKEME--------MAGVKPDGITFLGVLKACS 299
H +A L + +E +KP+ IT + +L +C+
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 167/329 (50%), Gaps = 40/329 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T ++++ +++AL +F+ +H L D F VL +C LRR G IH
Sbjct: 229 VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIH 288
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ SN + S+L+++YG C S+ AR +F+ + +N V W+A++ Y
Sbjct: 289 GKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYC------ 342
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
QN KAI ++R M E +L +L
Sbjct: 343 ----------------------------QNGEHEKAIEIFREMEEKDL----YCFGTVLK 370
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC +AA+ L KEIHG +R + + S LI+ YG+ GC+ ++ V+ KM +++
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI--RNM 428
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
+ W++++SA A +G + A+ F +M G+KPD I+F+ +L AC H G D+ YF
Sbjct: 429 ITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVL 488
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M + YG++ ++HYSC++D+L RAG E
Sbjct: 489 MAKSYGIKPGTEHYSCMIDLLGRAGLFEE 517
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 136/294 (46%), Gaps = 54/294 (18%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPFLGASIHA 74
+T +++ +V H +AL VF + ++ LD + F+L +K+C+ L LG H
Sbjct: 131 WTSMMSGYVTGKEHVKALEVFVEM---VSFGLDANEFTLSSAVKACSELGEVRLGRCFHG 187
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLP 134
F N FI+S L LYG AR +FDE+P + + W A++S ++ + D
Sbjct: 188 VVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN-DLYE 246
Query: 135 AALELFHLM----DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
AL LF+ M + P+ STF +
Sbjct: 247 EALGLFYAMHRGKGLVPDGSTFGTV----------------------------------- 271
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
L AC N+ L KEIHG I N I + + S L++ YG+CG + +R VF M
Sbjct: 272 -LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS--K 328
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 304
K+ V WS+L+ Y +GE + A+E F+EME + D F VLKAC AG A
Sbjct: 329 KNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKAC--AGLA 376
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 177/336 (52%), Gaps = 13/336 (3%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + LIT +AL VF + + P D + V+ +C +L +G +H
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEP-DEVTLASVISACASLSAIKVGQEVH 276
Query: 74 AHAAKSSFLSNPFIAS-ALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
K+ L N I S A +++Y C + AR +FD +P RN + +MIS YA + S
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA-S 335
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
AA +F M N ++N +IA QN +A++L+ + + P + +L
Sbjct: 336 TKAARLMFTKM-AERNVVSWNALIAGYT-QNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 193 PACVNVAALNLIKEIH------GYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
AC ++A L+L + H G+ ++ +G+ LI+ Y +CGC+ VF KM
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 306
M++D V W+++I +A +G ALE F+EM +G KPD IT +GVL AC HAGF ++
Sbjct: 454 --MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 307 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
YF+ M RD+GV DHY+C+VD+L RAG L E
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEE 547
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 152/328 (46%), Gaps = 65/328 (19%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A S + S + +++ R ++AL F +H L+ + F+ VL +C+
Sbjct: 105 ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKE-GFVLNEYSFASVLSACS 163
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
L G +H+ AKS FLS+ +I SAL+++Y C ++ A+ +FDE+ RN V WN+
Sbjct: 164 GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS 223
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
+I+ + + ++ AL++F +M LE +
Sbjct: 224 LITCFEQNGPAVE-ALDVFQMM---------------------------------LESRV 249
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHP-QLGSGLIEAYGRCGCLVNSR 240
+P +TL +++ AC +++A+ + +E+HG ++ND + + L + ++ Y +C + +R
Sbjct: 250 EPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEAR 309
Query: 241 NVFWKM-----------------------------RDMDKDVVVWSSLISAYALHGEAKA 271
+F M + +++VV W++LI+ Y +GE +
Sbjct: 310 FIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 272 ALETFKEMEMAGVKPDGITFLGVLKACS 299
AL F ++ V P +F +LKAC+
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACA 397
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 136/268 (50%), Gaps = 6/268 (2%)
Query: 33 ALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGAS-IHAHAAKSSFLSNPFIASAL 91
A F + + L+ D F+ +L SC + + +HA KS F + FI + L
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRL 61
Query: 92 INLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNEST 151
I+ Y C SL R +FD++P RN WN++++ L A LF M ++ T
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT-KLGFLDEADSLFRSMP-ERDQCT 119
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
+N +++ AQ+D +A+ + M + + ++L AC + +N ++H
Sbjct: 120 WNSMVSGF-AQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 212 IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA 271
++ + +GS L++ Y +CG + +++ VF +M D++VV W+SLI+ + +G A
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG--DRNVVSWNSLITCFEQNGPAVE 236
Query: 272 ALETFKEMEMAGVKPDGITFLGVLKACS 299
AL+ F+ M + V+PD +T V+ AC+
Sbjct: 237 ALDVFQMMLESRVEPDEVTLASVISACA 264
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 176/343 (51%), Gaps = 9/343 (2%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL-VLKSC 60
A + + ++ + +I V + D+AL +F + S HV + VL +C
Sbjct: 185 ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA--SHVTMVGVLSAC 242
Query: 61 TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
+R G + ++ ++ N +A+A++++Y C S+ A+ LFD + ++ V W
Sbjct: 243 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 302
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNE-STFNPIIAALAAQNDGAFKAIALYRRMLEL 179
M+ YA S D AA E+ + M P + +N +I+A I + L+
Sbjct: 303 TMLDGYAISED-YEAAREVLNSM--PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359
Query: 180 ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNS 239
+K ITL++ L AC V AL L + IH Y ++ I + + S LI Y +CG L S
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 240 RNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
R VF + +DV VWS++I A+HG A++ F +M+ A VKP+G+TF V ACS
Sbjct: 420 REVFNSVEK--RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 300 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
H G D+A F +M+ +YG+ HY+C+VDVL R+G L +
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 145/326 (44%), Gaps = 69/326 (21%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
+ + F ++K+ + LG S+H A KS+ S+ F+A++LI+ Y C L SA +F
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 109 DEIPHRNEVVWNAMISLYAH--SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGA 166
I ++ V WN+MI+ + SPD ALELF
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDK---ALELF-------------------------- 220
Query: 167 FKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGL 226
++M ++K +T++ +L AC + L +++ Y N + + L + +
Sbjct: 221 -------KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMD-----------------------------KDVVVWS 257
++ Y +CG + +++ +F M + D KD+V W+
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 258 SLISAYALHGEAKAALETFKEMEM-AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
+LISAY +G+ AL F E+++ +K + IT + L AC+ G + + +++
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 317 DYGVEASSDHYSCLVDVLSRAGRLHE 342
+G+ + S L+ + S+ G L +
Sbjct: 394 -HGIRMNFHVTSALIHMYSKCGDLEK 418
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 40/246 (16%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINL--YGHCLSLTSARHLFDEIPH 113
+++ C +LR+ H H ++ S+P+ AS L + SL AR +FDEIP
Sbjct: 36 LIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 114 RNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALY 173
N WN + I A A+ D A
Sbjct: 93 PNSFAWNTL---------------------------------IRAYASGPDPVLSIWAFL 119
Query: 174 RRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRC 233
+ E + P T L+ A V++L+L + +HG +++ + + + LI Y C
Sbjct: 120 DMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC 179
Query: 234 GCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 293
G L ++ VF ++ +KDVV W+S+I+ + G ALE FK+ME VK +T +G
Sbjct: 180 GDLDSACKVFTTIK--EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 294 VLKACS 299
VL AC+
Sbjct: 238 VLSACA 243
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 173/343 (50%), Gaps = 44/343 (12%)
Query: 7 YSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTA---- 62
+ T R +Y + + + H + + + + + + D ++ VLK+C A
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 63 LRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAM 122
+ G IHAH + + S+ +I + L+++Y + A ++F +P RN V W+AM
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 123 ISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELK 182
I+ YA +N AF+A+ +R M+ E K
Sbjct: 255 IACYA----------------------------------KNGKAFEALRTFREMMR-ETK 279
Query: 183 ---PRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNS 239
P +T++++L AC ++AAL K IHGY +R + + S L+ YGRCG L
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 240 RNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
+ VF +M D +DVV W+SLIS+Y +HG K A++ F+EM G P +TF+ VL ACS
Sbjct: 340 QRVFDRMHD--RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACS 397
Query: 300 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
H G ++ F M RD+G++ +HY+C+VD+L RA RL E
Sbjct: 398 HEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 174/337 (51%), Gaps = 6/337 (1%)
Query: 8 SATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF 67
S + ++ + +++ H +A+ +F IH P D S VL S
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP-DQVTVSSVLPSVGDSEMLN 269
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
+G IH + K L + + SA+I++YG + LF++ V NA I+ +
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 128 HSP--DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
+ D ELF + N ++ IIA AQN +A+ L+R M +KP
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAG-CAQNGKDIEALELFREMQVAGVKPNH 388
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
+T+ ++LPAC N+AAL + HG+ +R ++ + +GS LI+ Y +CG + S+ VF
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
M K++V W+SL++ +++HG+AK + F+ + +KPD I+F +L AC G D
Sbjct: 449 MPT--KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 306 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ YF M +YG++ +HYSC+V++L RAG+L E
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 148/319 (46%), Gaps = 37/319 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
F+ LI + Q++ VF + S +P D HV + K C L +G IH +
Sbjct: 84 FSSLIYALTKAKLFTQSIGVFSRMFSHGLIP-DSHVLPNLFKVCAELSAFKVGKQIHCVS 142
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
S + F+ ++ ++Y C + AR +FD + ++ V +A++ YA L
Sbjct: 143 CVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARK-GCLEEV 201
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAF--KAIALYRRMLELELKPRLITLLALLPA 194
+ + M+ E+ L+ N + +A+ +++++ L P +T+ ++LP+
Sbjct: 202 VRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPS 261
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG------CLVN---------- 238
+ LN+ + IHGY I+ ++ + S +I+ YG+ G L N
Sbjct: 262 VGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC 321
Query: 239 -------SRN----------VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM 281
SRN +K + M+ +VV W+S+I+ A +G+ ALE F+EM++
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 282 AGVKPDGITFLGVLKACSH 300
AGVKP+ +T +L AC +
Sbjct: 382 AGVKPNHVTIPSMLPACGN 400
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 142 LMDVP-PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAA 200
L +P P +F+ +I AL ++I ++ RM L P L L C ++A
Sbjct: 73 LQSIPDPTIYSFSSLIYALTKAKLFT-QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 201 LNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLI 260
+ K+IH + + + + Y RCG + ++R VF +M D KDVV S+L+
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD--KDVVTCSALL 189
Query: 261 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 314
AYA G + + EME +G++ + +++ G+L + +G+ +A+ F ++
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 163/296 (55%), Gaps = 8/296 (2%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D VFS ++K+C L G +H H S + ++ + S+L+++Y C L SA+ +F
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG--A 166
D I +N + W AM+S YA S ALELF ++ V N ++ +I+ G A
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRK-EEALELFRILPVK-NLYSWTALISGFVQSGKGLEA 221
Query: 167 FKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGL 226
F RR L P + L +++ AC N+AA +++HG I + + L
Sbjct: 222 FSVFTEMRRERVDILDP--LVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
I+ Y +C ++ ++++F +MR +DVV W+SLI A HG+A+ AL + +M GVKP
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRH--RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKP 337
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ +TF+G++ ACSH GF + F M +DYG+ S HY+CL+D+L R+G L E
Sbjct: 338 NEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDE 393
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 114/261 (43%), Gaps = 39/261 (14%)
Query: 57 LKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNE 116
L+ C R ++HAH K + +A+ L+N+YG C + + A +FDE+PHR+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 117 VVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRM 176
+ W + ++ AL N
Sbjct: 70 IAWAS---------------------------------VLTALNQANLSGKTLSVFSSVG 96
Query: 177 LELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL 236
L+P AL+ AC N+ +++ +++H + I ++ + S L++ Y +CG L
Sbjct: 97 SSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLL 156
Query: 237 VNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 296
+++ VF +R K+ + W++++S YA G + ALE F+ + + + ++ ++
Sbjct: 157 NSAKAVFDSIR--VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL----YSWTALIS 210
Query: 297 ACSHAGFADDALCYFTRMQRD 317
+G +A FT M+R+
Sbjct: 211 GFVQSGKGLEAFSVFTEMRRE 231
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 170/303 (56%), Gaps = 12/303 (3%)
Query: 47 PLDPHVFSLVLKSCTALRRP--FLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSA 104
P D + +LK+ + R P LG +H K F S+ ++ +AL+ +Y ++ A
Sbjct: 118 PFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDA 177
Query: 105 RHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNES--TFNPIIAALAAQ 162
+FDE+P RN V WN MI+ + D AL M PN + ++ II A +
Sbjct: 178 HKVFDEMPERNPVTWNVMITGLTNLGD-FEKALCFLEKM---PNRTVVSWTTIIDGYA-R 232
Query: 163 NDGAFKAIALYRRMLELE-LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVP-HP 220
D +AI L+ RM+ + +KP IT+LA+LPA N+ L + +H Y + VP
Sbjct: 233 VDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDI 292
Query: 221 QLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEME 280
++ + LI+AY +CGC+ ++ F ++ + K++V W+++ISA+A+HG K A+ FK+ME
Sbjct: 293 RVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDME 352
Query: 281 MAGVKPDGITFLGVLKACSHAGFADDA-LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 339
G+KP+ +T + VL ACSH G A++ L +F M +Y + HY CLVD+L R GR
Sbjct: 353 RLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGR 412
Query: 340 LHE 342
L E
Sbjct: 413 LEE 415
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 171/327 (52%), Gaps = 12/327 (3%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I V+ R ++++H + LP D +V + VLK+C + IHA
Sbjct: 95 YTAMIDGFVSSGRSADGVSLYHRMIHNSVLP-DNYVITSVLKACDLK----VCREIHAQV 149
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K F S+ + ++ +YG L +A+ +FDE+P R+ V MI+ Y+ + A
Sbjct: 150 LKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG-FIKEA 208
Query: 137 LELFHLMDVPPNEST-FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
LELF DV ++ + +I L +N KA+ L+R M + T + +L AC
Sbjct: 209 LELFQ--DVKIKDTVCWTAMIDGLV-RNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
++ AL L + +H + + +G+ LI Y RCG + +R VF MRD KDV+
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD--KDVIS 323
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 315
++++IS A+HG + A+ F++M G +P+ +T + +L ACSH G D L F M+
Sbjct: 324 YNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMK 383
Query: 316 RDYGVEASSDHYSCLVDVLSRAGRLHE 342
R + VE +HY C+VD+L R GRL E
Sbjct: 384 RVFNVEPQIEHYGCIVDLLGRVGRLEE 410
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 183/329 (55%), Gaps = 12/329 (3%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L FT I + DQA ++ + S+ P + FS +LKSC+ G IH
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLLSSEINP-NEFTFSSLLKSCSTKS----GKLIH 149
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
H K +P++A+ L+++Y + SA+ +FD +P R+ V AMI+ YA + +
Sbjct: 150 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGN-V 208
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRML-ELELKPRLITLLALL 192
AA LF M + ++N +I A Q+ A+ L++++L E + KP IT++A L
Sbjct: 209 EAARALFDSM-CERDIVSWNVMIDGYA-QHGFPNDALMLFQKLLAEGKPKPDEITVVAAL 266
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
AC + AL + IH + + I + ++ +GLI+ Y +CG L + VF KD
Sbjct: 267 SACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR--KD 324
Query: 253 VVVWSSLISAYALHGEAKAALETFKEME-MAGVKPDGITFLGVLKACSHAGFADDALCYF 311
+V W+++I+ YA+HG ++ AL F EM+ + G++P ITF+G L+AC+HAG ++ + F
Sbjct: 325 IVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIF 384
Query: 312 TRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
M ++YG++ +HY CLV +L RAG+L
Sbjct: 385 ESMGQEYGIKPKIEHYGCLVSLLGRAGQL 413
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 179/320 (55%), Gaps = 6/320 (1%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+I N +++++V+ + LP D + ++KS + L LG S+H KS
Sbjct: 79 VIRGFSNSRNPEKSISVYIQMLRFGLLP-DHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS 137
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
+ FI + LI++YG SAR LFDE+PH+N V WN+++ YA S D + A L +
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL-V 196
Query: 140 FHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL-ELKPRLITLLALLPACVNV 198
F M + T++ +I + + KA+ ++ +M+ + K +T+++++ AC ++
Sbjct: 197 FDEMS-ERDVVTWSSMIDGYVKRGEYN-KALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSS 258
ALN K +H Y + + L + LI+ Y +CG + ++ +VF++ + D ++W++
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 259 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 318
+I A HG + +L+ F +M + + PD ITFL +L ACSH G +A +F + ++
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KES 373
Query: 319 GVEASSDHYSCLVDVLSRAG 338
G E S+HY+C+VDVLSRAG
Sbjct: 374 GAEPKSEHYACMVDVLSRAG 393
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 124/281 (44%), Gaps = 15/281 (5%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ ++ +I +V + +++AL +F + + + V+ +C L G ++H
Sbjct: 205 VVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVH 264
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF--DEIPHRNEVVWNAMISLYAHSPD 131
+ + ++LI++Y C S+ A +F + + ++WNA+I A S
Sbjct: 265 RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLA-SHG 323
Query: 132 SLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAF--KAIALYRRMLELELKPRLI 186
+ +L+LFH M + P+E TF + LAA + G +A ++ + E +P+
Sbjct: 324 FIRESLQLFHKMRESKIDPDEITF---LCLLAACSHGGLVKEAWHFFKSLKESGAEPKSE 380
Query: 187 TLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
++ ++ L+K+ H + I P + L+ G L + V K+
Sbjct: 381 HYACMVDV---LSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKL 437
Query: 247 RDMD-KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
++ + + L + YA++ + +AA + ME GVK
Sbjct: 438 IELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKK 478
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 169/332 (50%), Gaps = 12/332 (3%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + LI+S+V R + A+ VF + L D L +C+AL+ +G I+
Sbjct: 112 VVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY 171
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ F + I +AL++++ C L AR +FD + +N W +M+ Y S +
Sbjct: 172 RFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYV-STGRI 229
Query: 134 PAALELFH---LMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
A LF + DV + N + Q + +A+ L+R M ++P L++
Sbjct: 230 DEARVLFERSPVKDVVLWTAMMNGYV-----QFNRFDEALELFRCMQTAGIRPDNFVLVS 284
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
LL C AL K IHGY N + +G+ L++ Y +CGC+ + VF+++++
Sbjct: 285 LLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE-- 342
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 310
+D W+SLI A++G + AL+ + EME GV+ D ITF+ VL AC+H GF +
Sbjct: 343 RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKI 402
Query: 311 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
F M + V+ S+H SCL+D+L RAG L E
Sbjct: 403 FHSMTERHNVQPKSEHCSCLIDLLCRAGLLDE 434
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 138/320 (43%), Gaps = 68/320 (21%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
LL + K++ S + + L +F + P D +VLKS LR+ G +H
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYP-DNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+A K+ + +++++L+ +Y + +FDE+P R+ V WN +IS Y
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV------ 123
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK-AIALYRRM-LELELKPRLITLLAL 191
+G F+ AI +++RM E LK T+++
Sbjct: 124 -----------------------------GNGRFEDAIGVFKRMSQESNLKFDEGTIVST 154
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD- 250
L AC + L + + I+ + + + ++G+ L++ + +CGCL +R VF MRD +
Sbjct: 155 LSACSALKNLEIGERIYRF-VVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 251 ----------------------------KDVVVWSSLISAYALHGEAKAALETFKEMEMA 282
KDVV+W+++++ Y ALE F+ M+ A
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 283 GVKPDGITFLGVLKACSHAG 302
G++PD + +L C+ G
Sbjct: 274 GIRPDNFVLVSLLTGCAQTG 293
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 160/311 (51%), Gaps = 37/311 (11%)
Query: 32 QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASAL 91
+ ++F I LP D + F +LK+C + G +H + K N ++ L
Sbjct: 112 EVFSLFVEILEDGILP-DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTL 170
Query: 92 INLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNEST 151
IN+Y C + SAR +FD I V +NAMI+ YA PNE
Sbjct: 171 INMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRN---------------RPNE-- 213
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
A++L+R M LKP ITLL++L +C + +L+L K IH Y
Sbjct: 214 -----------------ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 212 IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA 271
++ + ++ + LI+ + +CG L ++ ++F KMR KD WS++I AYA HG+A+
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRY--KDTQAWSAMIVAYANHGKAEK 314
Query: 272 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 331
++ F+ M V+PD ITFLG+L ACSH G ++ YF++M +G+ S HY +V
Sbjct: 315 SMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMV 374
Query: 332 DVLSRAGRLHE 342
D+LSRAG L +
Sbjct: 375 DLLSRAGNLED 385
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 167/314 (53%), Gaps = 6/314 (1%)
Query: 30 HDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIAS 89
H A+TV+ + + P D F VLK + + G IH F S+ + +
Sbjct: 97 HSIAITVYRKLWALCAKP-DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVT 155
Query: 90 ALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDV-PPN 148
LI +Y C L AR +FDE+ ++ VWNA+++ Y + + A L +M N
Sbjct: 156 GLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE-MDEARSLLEMMPCWVRN 214
Query: 149 ESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIH 208
E ++ +I+ A ++ A +AI +++RML ++P +TLLA+L AC ++ +L L + I
Sbjct: 215 EVSWTCVISGYA-KSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 209 GYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGE 268
Y + L + +I+ Y + G + + +VF + + ++VV W+++I+ A HG
Sbjct: 274 SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE--RNVVTWTTIIAGLATHGH 331
Query: 269 AKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYS 328
AL F M AGV+P+ +TF+ +L ACSH G+ D F M+ YG+ + +HY
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 329 CLVDVLSRAGRLHE 342
C++D+L RAG+L E
Sbjct: 392 CMIDLLGRAGKLRE 405
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 174/354 (49%), Gaps = 36/354 (10%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+I ++ N S + ALTVF + P D + F+ VLK+C A G IH KS
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFP-DKYSFTFVLKACAAFCGFEEGRQIHGLFIKS 169
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
+++ F+ + L+N+YG AR + D +P R+ V WN+++S Y + A L
Sbjct: 170 GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEK-GLVDEARAL 228
Query: 140 FHLMDVPPNESTFNPIIAALAAQN-----------------------DGAFKAIALYRRM 176
F M+ N ++N +I+ AA A+ + Y +
Sbjct: 229 FDEME-ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEV 287
Query: 177 LEL--------ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
LE+ KP TL+++L AC ++ +L+ + +H Y ++ I L + L++
Sbjct: 288 LEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVD 347
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 288
Y +CG + + VF +DV W+S+IS ++HG K ALE F EM G KP+G
Sbjct: 348 MYSKCGKIDKALEVFRATSK--RDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNG 405
Query: 289 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
ITF+GVL AC+H G D A F M Y VE + +HY C+VD+L R G++ E
Sbjct: 406 ITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEE 459
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKE 206
PN T N +I A A + A+ ++R ML + P + +L AC ++
Sbjct: 103 PNGFTHNSVIRAYANSSTPEV-ALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 207 IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALH 266
IHG I++ +V + + L+ YGR G +R V +M +D V W+SL+SAY
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP--VRDAVSWNSLLSAYLEK 219
Query: 267 GEAKAALETFKEMEMAGVK 285
G A F EME V+
Sbjct: 220 GLVDEARALFDEMEERNVE 238
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 160/297 (53%), Gaps = 4/297 (1%)
Query: 46 LPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSAR 105
+ + F+ +L +C R+ L H + FLSN ++ ++I+ Y C + SA+
Sbjct: 175 IKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAK 234
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG 165
FDE+ ++ +W +IS YA D + AA +LF M N ++ +IA Q G
Sbjct: 235 RCFDEMTVKDIHIWTTLISGYAKLGD-MEAAEKLFCEMP-EKNPVSWTALIAGYVRQGSG 292
Query: 166 AFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG 225
+A+ L+R+M+ L +KP T + L A ++A+L KEIHGY IR ++ P+ + S
Sbjct: 293 N-RALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
LI+ Y + G L S VF ++ D D V W+++ISA A HG AL +M V+
Sbjct: 352 LIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 286 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
P+ T + +L ACSH+G ++ L +F M +G+ +HY+CL+D+L RAG E
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 153/360 (42%), Gaps = 51/360 (14%)
Query: 20 LITSHVNQSRHDQALTVFHHI-HSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAK 78
++ H ++ QA++ + + LP D + + +L+ C + G IH H
Sbjct: 17 FLSKHATKAELSQAVSRLESLTQQGIRLPFD--LLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 79 SSFLS-NPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAAL 137
+ F N +++ LI +Y C A +FD++ RN WN M+S Y S + A +
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 138 ELFHLMDVPPNES--TFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
+ D P ++N ++ A Q+ +A+ Y+ +K + LL AC
Sbjct: 135 ----VFDSMPERDVVSWNTMVIGYA-QDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTAC 189
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVF----------W- 244
V L L ++ HG + + + L +I+AY +CG + +++ F W
Sbjct: 190 VKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT 249
Query: 245 -------KMRDM-----------DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
K+ DM +K+ V W++LI+ Y G AL+ F++M GVKP
Sbjct: 250 TLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKP 309
Query: 287 DGITFLGVLKACSHAGFA-----DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
+ TF L C+ A A + Y R V ++ S L+D+ S++G L
Sbjct: 310 EQFTFSSCL--CASASIASLRHGKEIHGYMIRTN----VRPNAIVISSLIDMYSKSGSLE 363
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 171/327 (52%), Gaps = 37/327 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ LI + A +++ + + + D H + ++K+ T + LG +IH+
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
+S F S ++ ++L++LY +C + SA +FD++P ++ V WN++I+ +A
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA--------- 198
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
+N +A+ALY M +KP T+++LL AC
Sbjct: 199 -------------------------ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 233
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
+ AL L K +H Y I+ + + + L++ Y RCG + ++ +F +M +DK+ V W
Sbjct: 234 KIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM--VDKNSVSW 291
Query: 257 SSLISAYALHGEAKAALETFKEME-MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 315
+SLI A++G K A+E FK ME G+ P ITF+G+L ACSH G + YF RM+
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 351
Query: 316 RDYGVEASSDHYSCLVDVLSRAGRLHE 342
+Y +E +H+ C+VD+L+RAG++ +
Sbjct: 352 EEYKIEPRIEHFGCMVDLLARAGQVKK 378
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 157/313 (50%), Gaps = 39/313 (12%)
Query: 30 HDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIAS 89
H + + +F I + L + +D + V+ SC+ + LG S+H + K+S + +
Sbjct: 414 HVKCIELFRKIQN-LGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVN 472
Query: 90 ALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNE 149
+LI+LYG LT A +F E N + WNAMI+ Y H S
Sbjct: 473 SLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSE---------------- 515
Query: 150 STFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHG 209
KAIAL+ RM+ KP ITL+ LL ACVN +L + IH
Sbjct: 516 ------------------KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 210 YGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEA 269
Y + + L + LI+ Y +CG L SR +F KD V W+ +IS Y +HG+
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELF--DAGNQKDAVCWNVMISGYGMHGDV 615
Query: 270 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC 329
++A+ F +ME + VKP G TFL +L AC+HAG + F +M + Y V+ + HYSC
Sbjct: 616 ESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSC 674
Query: 330 LVDVLSRAGRLHE 342
LVD+LSR+G L E
Sbjct: 675 LVDLLSRSGNLEE 687
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 124/292 (42%), Gaps = 37/292 (12%)
Query: 1 MASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC 60
++S ++ T + + +I +H + + ++L F + + P D +V+ +C
Sbjct: 77 LSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSP-DHFTAPMVVSAC 135
Query: 61 TALRRPFLGASIHAHAAK-SSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVW 119
L +G +H K F N + ++ + Y C L A +FDE+P R+ V W
Sbjct: 136 AELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAW 195
Query: 120 NAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL 179
A+IS + + +S E + +A +D
Sbjct: 196 TAIISGHVQNGES----------------EGGLGYLCKMHSAGSDVD------------- 226
Query: 180 ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNS 239
KP TL AC N+ AL + +HG+ ++N + + S + Y + G N
Sbjct: 227 --KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSG---NP 281
Query: 240 RNVFWKMRDM-DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGIT 290
+ R++ D+D+ W+S+I++ A G+ + + + F EM+ G+ PDG+
Sbjct: 282 SEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 136/320 (42%), Gaps = 38/320 (11%)
Query: 7 YSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRP 66
+ + ++ + +I S+V+ + ++A+ +F + S P + +L++ +C
Sbjct: 491 FCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLM-ACVNTGSL 549
Query: 67 FLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLY 126
G IH + ++ N +++ALI++Y C L +R LFD ++ V WN MIS Y
Sbjct: 550 ERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGY 609
Query: 127 AHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI 186
D AIAL+ +M E ++KP
Sbjct: 610 GMHGD----------------------------------VESAIALFDQMEESDVKPTGP 635
Query: 187 TLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
T LALL AC + + K++ + D+ P+ + S L++ R G L + + M
Sbjct: 636 TFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSM 695
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 306
D V+W +L+S+ HGE + + + + + DG ++ + S AG ++
Sbjct: 696 -PFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY-YIMLANMYSAAGKWEE 753
Query: 307 ALCYFTRMQRDYGVEASSDH 326
A M R+ GV + H
Sbjct: 754 AE-RAREMMRESGVGKRAGH 772
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
+N II A + D A +++ + ML P T ++ AC + ++ +HG
Sbjct: 93 WNSIIKAHFSNGDYA-RSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 212 IR-NDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAK 270
++ + +G+ + Y +CG L ++ VF +M D +DVV W+++IS + +GE++
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPD--RDVVAWTAIISGHVQNGESE 209
Query: 271 AALETFKEMEMAGV---KPDGITFLGVLKACSHAGFADDALC 309
L +M AG KP+ T +ACS+ G + C
Sbjct: 210 GGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRC 251
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 164/292 (56%), Gaps = 8/292 (2%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
D F V+K+C A LG +H A K+ F ++ F + L++LY C S R +
Sbjct: 117 FDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKV 176
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDS-LPAALELFHLMDVPPNESTFNPIIAALAAQNDGA 166
FD++P R+ V W M LY +S L +A +F+ M + N ++ +I A +N
Sbjct: 177 FDKMPGRSIVSWTTM--LYGLVSNSQLDSAEIVFNQMPMR-NVVSWTAMITAYV-KNRRP 232
Query: 167 FKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGL 226
+A L+RRM ++KP T++ LL A + +L++ + +H Y +N V LG+ L
Sbjct: 233 DEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTAL 292
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM-AGVK 285
I+ Y +CG L ++R VF M+ K + W+S+I++ +HG + AL F+EME A V+
Sbjct: 293 IDMYSKCGSLQDARKVFDVMQG--KSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVE 350
Query: 286 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRA 337
PD ITF+GVL AC++ G D L YFTRM + YG+ +H +C++ +L +A
Sbjct: 351 PDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQA 402
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLV--LKSCTALRRPFLGASIHA 74
+T +IT++V R D+A +F + + P+ F++V L++ T L +G +H
Sbjct: 219 WTAMITAYVKNRRPDEAFQLFRRMQVD---DVKPNEFTIVNLLQASTQLGSLSMGRWVHD 275
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMI-SLYAHSPDSL 133
+A K+ F+ + F+ +ALI++Y C SL AR +FD + ++ WN+MI SL H
Sbjct: 276 YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGE- 334
Query: 134 PAALELFHLM----DVPPNESTFNPIIAALAAQNDGAFK-AIALYRRMLEL 179
AL LF M V P+ TF +++A A N G K + + RM+++
Sbjct: 335 -EALSLFEEMEEEASVEPDAITFVGVLSACA--NTGNVKDGLRYFTRMIQV 382
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 37/293 (12%)
Query: 51 HVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDE 110
+ F+ V+KSC L +G +H HA S F + ++ +AL+ Y C + AR +FD
Sbjct: 108 YTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDR 167
Query: 111 IPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAI 170
+P ++ V WN+++S + QN A +AI
Sbjct: 168 MPEKSIVAWNSLVSGFE----------------------------------QNGLADEAI 193
Query: 171 ALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAY 230
++ +M E +P T ++LL AC A++L +H Y I + + +LG+ LI Y
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 231 GRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM-AGVKPDGI 289
RCG + +R VF KM++ + V W+++ISAY HG + A+E F +ME G P+ +
Sbjct: 254 SRCGDVGKAREVFDKMKETN--VAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 290 TFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
TF+ VL AC+HAG ++ + RM + Y + +H+ C+VD+L RAG L E
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDE 364
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 155/296 (52%), Gaps = 5/296 (1%)
Query: 47 PLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARH 106
P + + F +LK+C+ L IHA K + ++ + ++LIN Y + A
Sbjct: 112 PHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHL 171
Query: 107 LFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGA 166
LFD IP ++V WN++I Y + + AL LF M N ++ +I+ Q D
Sbjct: 172 LFDRIPEPDDVSWNSVIKGYVKA-GKMDIALTLFRKM-AEKNAISWTTMISGYV-QADMN 228
Query: 167 FKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGL 226
+A+ L+ M +++P ++L L AC + AL K IH Y + I LG L
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
I+ Y +CG + + VF ++ K V W++LIS YA HG + A+ F EM+ G+KP
Sbjct: 289 IDMYAKCGEMEEALEVFKNIKK--KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKP 346
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ ITF VL ACS+ G ++ F M+RDY ++ + +HY C+VD+L RAG L E
Sbjct: 347 NVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDE 402
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
S D LP A +F D P+ +N +I + +D +++ LY+RML T
Sbjct: 61 SSDFLPYAQIVFDGFD-RPDTFLWNLMIRGFSC-SDEPERSLLLYQRMLCSSAPHNAYTF 118
Query: 189 LALLPACVNVAALNLIKEIHGY----GIRNDI-------------------------VPH 219
+LL AC N++A +IH G ND+ +P
Sbjct: 119 PSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE 178
Query: 220 PQLGS--GLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFK 277
P S +I+ Y + G + + +F KM +K+ + W+++IS Y K AL+ F
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKM--AEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 278 EMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRA 337
EM+ + V+PD ++ L AC+ G + + + + + S L+D+ ++
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR-IRMDSVLGCVLIDMYAKC 295
Query: 338 GRLHE 342
G + E
Sbjct: 296 GEMEE 300
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 165/329 (50%), Gaps = 38/329 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T +++++ +AL +F + P D VL + T L+ G SIH
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP-DWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
A K P + +L +Y C + +A+ LFD++ N ++WNAMIS YA
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA------ 299
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
+N A +AI ++ M+ +++P I++ + +
Sbjct: 300 ----------------------------KNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC V +L + ++ Y R+D + S LI+ + +CG + +R VF R +D+DV
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF--DRTLDRDV 389
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
VVWS++I Y LHG A+ A+ ++ ME GV P+ +TFLG+L AC+H+G + +F R
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR 449
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M D+ + HY+C++D+L RAG L +
Sbjct: 450 MA-DHKINPQQQHYACVIDLLGRAGHLDQ 477
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 34/227 (14%)
Query: 71 SIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSP 130
IHA + F+ + LI+ +T AR +FD++P WNA+I Y+ +
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 131 DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
H D A+ +Y M + P T
Sbjct: 99 ----------HFQD------------------------ALLMYSNMQLARVSPDSFTFPH 124
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
LL AC ++ L + + +H R + +GLI Y +C L ++R VF + +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 297
+ +V W++++SAYA +GE ALE F +M VKPD + + VL A
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 169/333 (50%), Gaps = 17/333 (5%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I + + + D+A+ ++ + P+ FS +LK+C ++ LG HA
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVS-FTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
+ ++ + +I++Y C S+ AR +FDE+P R+ + W +I+ YA + + A
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN-MECA 234
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
ELF +P + + AQN +A+ + RM + ++ +T+ + AC
Sbjct: 235 AELFE--SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 197 NVAALNL------IKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
+ A I + GY + +V +GS LI+ Y +CG + + NVF M +
Sbjct: 293 QLGASKYADRAVQIAQKSGYSPSDHVV----IGSALIDMYSKCGNVEEAVNVFMSMNN-- 346
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALC 309
K+V +SS+I A HG A+ AL F M +KP+ +TF+G L ACSH+G D
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 310 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
F M + +GV+ + DHY+C+VD+L R GRL E
Sbjct: 407 VFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQE 439
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 160 AAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPH 219
+ N G F I+ + +L + +L++ L C+N LN IK+IHG+ +R +
Sbjct: 31 TSNNSGTFSEISNQKELL-------VSSLISKLDDCIN---LNQIKQIHGHVLRKGLDQS 80
Query: 220 PQLGSGLIEAYGRCGCLVN--SRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFK 277
+ + LI + G ++ +R V ++ ++ +W+++I YA+ G+ A+ +
Sbjct: 81 CYILTKLIRTLTKLGVPMDPYARRVIEPVQF--RNPFLWTAVIRGYAIEGKFDEAIAMYG 138
Query: 278 EMEMAGVKPDGITFLGVLKACS 299
M + P TF +LKAC
Sbjct: 139 CMRKEEITPVSFTFSALLKACG 160
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 164/333 (49%), Gaps = 12/333 (3%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +++ H + + L FH + + + ++ C L + +H +
Sbjct: 262 WTSVLSCHSQCGKFEDVLKYFHLMRMSGN-AVSGEALAVFFSVCAELEALSIAEKVHGYV 320
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K F +ALI++YG + A HLF +I ++ WN++I+ + + L A
Sbjct: 321 IKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDA-GKLDEA 379
Query: 137 LELF-------HLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
L LF H+ +V N T+ +I Q G ++ +R+M ++ +T+
Sbjct: 380 LSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGD-DSLEYFRQMQFSKVLANSVTIC 438
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
+L C + ALNL +EIHG+ IR + + + + L+ Y +CG L VF +RD
Sbjct: 439 CILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRD- 497
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
KD++ W+S+I Y +HG A+ AL F M +G PDGI + VL ACSHAG +
Sbjct: 498 -KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGRE 556
Query: 310 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
F M + +G+E +HY+C+VD+L R G L E
Sbjct: 557 IFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKE 589
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 157/312 (50%), Gaps = 14/312 (4%)
Query: 12 SRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGAS 71
S L + ++ ++V+ ++ AL ++ + L D ++ L+L++C L R L +
Sbjct: 121 SDLRLWNSILKANVSHGLYENALELYRGMRQR-GLTGDGYILPLILRACRYLGRFGLCRA 179
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
H + N + + L+ LY + A +LF E+P RN + WN MI ++ D
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 132 SLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
+A+++F M + P+E T+ +++ + G F+ + Y ++ +
Sbjct: 240 C-ESAVKIFEWMQREEFKPDEVTWTSVLSCHS--QCGKFEDVLKYFHLMRMSGNAVSGEA 296
Query: 189 LAL-LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
LA+ C + AL++ +++HGY I+ + + LI YG+ G + ++ ++F ++R
Sbjct: 297 LAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR 356
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEME----MAGVKPDGITFLGVLKACSHAGF 303
+K + W+SLI+++ G+ AL F E+E + VK + +T+ V+K C+ G
Sbjct: 357 --NKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGR 414
Query: 304 ADDALCYFTRMQ 315
DD+L YF +MQ
Sbjct: 415 GDDSLEYFRQMQ 426
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 205 KEIHGYGIRND-IVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR-DMDKDVVVWSSLISA 262
+++H + +D I L + LI Y R G L+++RNVF + + D+ +W+S++ A
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 263 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
HG + ALE ++ M G+ DG +L+AC + G
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLG 172
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 171/327 (52%), Gaps = 44/327 (13%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF---LGASIHAHA 76
+I N D+A++VF + S+ +P + SL+ A +P G IH++
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL----CAQTKPMALSQGMQIHSYI 397
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR-NEVVWNAMISLYAHSPDSLPA 135
K FL++ + ++L+ +Y C L +LF++ + + V WN + L A
Sbjct: 398 IKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTI----------LTA 447
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
L Q++ + + L++ ML E +P IT+ LL C
Sbjct: 448 CL------------------------QHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
V +++L L ++H Y ++ + P + +GLI+ Y +CG L +R +F M + +DVV
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDN--RDVVS 541
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 315
WS+LI YA G + AL FKEM+ AG++P+ +TF+GVL ACSH G ++ L + MQ
Sbjct: 542 WSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
Query: 316 RDYGVEASSDHYSCLVDVLSRAGRLHE 342
++G+ + +H SC+VD+L+RAGRL+E
Sbjct: 602 TEHGISPTKEHCSCVVDLLARAGRLNE 628
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 129/297 (43%), Gaps = 35/297 (11%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
AS +Y L+ ++ +I +AL+ + S + ++F LK+C+
Sbjct: 222 ASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
+L RP G+ IH KS N +L ++Y C L SAR +FD+I
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER-------- 333
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
P+ +++N IIA LA N A +A++++ +M
Sbjct: 334 -------------------------PDTASWNVIIAGLA-NNGYADEAVSVFSQMRSSGF 367
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
P I+L +LL A AL+ +IH Y I+ + + + L+ Y C L N
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+F R+ + D V W+++++A H + L FK M ++ +PD IT +L+ C
Sbjct: 428 LFEDFRN-NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 135/304 (44%), Gaps = 46/304 (15%)
Query: 1 MASSSYYSATHSRLLYFTKLITSHVNQ----SRHDQALTVFHHIHSTLTLPLDPHVFSLV 56
+A+SS S + +L+ H+N + + +AL F + + + +
Sbjct: 19 LATSSVVSTIKTE-----ELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISL 73
Query: 57 LKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNE 116
+ +C++ R G IH H S+ + + + ++++YG C SL AR +FD +P RN
Sbjct: 74 ICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNL 133
Query: 117 VVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRM 176
V + ++I+ Y+ QN +AI LY +M
Sbjct: 134 VSYTSVITGYS----------------------------------QNGQGAEAIRLYLKM 159
Query: 177 LELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL 236
L+ +L P +++ AC + + + L K++H I+ + H + LI Y R +
Sbjct: 160 LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQM 219
Query: 237 VNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGV-KPDGITFLGVL 295
++ VF+ + KD++ WSS+I+ ++ G AL KEM GV P+ F L
Sbjct: 220 SDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 296 KACS 299
KACS
Sbjct: 278 KACS 281
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 38/285 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ +T +IT + + +A+ ++ + +P D F ++K+C + LG +H
Sbjct: 133 LVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP-DQFAFGSIIKACASSSDVGLGKQLH 191
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
A K S+ +ALI +Y ++ A +F IP ++ + W+++I+ ++
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS------ 245
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL-KPRLITLLALL 192
Q F+A++ + ML + P + L
Sbjct: 246 ----------------------------QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
AC ++ + +IHG I++++ + G L + Y RCG L ++R VF ++ D
Sbjct: 278 KACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE--RPD 335
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 297
W+ +I+ A +G A A+ F +M +G PD I+ +L A
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 176/362 (48%), Gaps = 45/362 (12%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+I + + ++L F ++ L LD + +LK+ L G IH K
Sbjct: 88 MIGACARNGYYQESLDFFREMYKD-GLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS---------- 129
S+ S+ FI S+LI++Y + +AR +F ++ ++ VV+NAMIS YA++
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 130 ---------PD------------------SLPAALELFHLMDVPPNESTFNPIIAALA-- 160
PD + LEL L P+ ++ II+ L
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHN 266
Query: 161 AQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHP 220
QN+ AF A +++ML L P T++ LLPAC +A + KEIHGY + + H
Sbjct: 267 FQNEKAFDA---FKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG 323
Query: 221 QLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEME 280
+ S L++ YG+CG + + +F K K V ++S+I YA HG A A+E F +ME
Sbjct: 324 FVRSALLDMYGKCGFISEAMILFRKTPK--KTTVTFNSMIFCYANHGLADKAVELFDQME 381
Query: 281 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
G K D +TF +L ACSHAG D F MQ Y + +HY+C+VD+L RAG+L
Sbjct: 382 ATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKL 441
Query: 341 HE 342
E
Sbjct: 442 VE 443
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 163/330 (49%), Gaps = 39/330 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + +I +V + + + + + T P + S +L +C+ R G IH
Sbjct: 274 LVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTS-ILMACSRSRNLLHGKFIH 332
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ +S ++ ++ +LI+LY C A +F + WN MIS Y
Sbjct: 333 GYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSY------- 385
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
++ N FKA+ +Y +M+ + +KP ++T ++LP
Sbjct: 386 -------------------------ISVGN--WFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM-DKD 252
AC +AAL K+IH + + L S L++ Y +CG N + F + KD
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG---NEKEAFRIFNSIPKKD 475
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
VV W+ +ISAY HG+ + AL F EM+ G+KPDG+T L VL AC HAG D+ L +F+
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS 535
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+M+ YG+E +HYSC++D+L RAGRL E
Sbjct: 536 QMRSKYGIEPIIEHYSCMIDILGRAGRLLE 565
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 131/292 (44%), Gaps = 38/292 (13%)
Query: 11 HSRLLYFTKLITSHVNQSRHDQALTVFHHI-HSTLTLPLDPHVFSLVLKSCTALRRPFLG 69
S + + L++ + S L VF + + ++ +P D F V+K+ AL R FLG
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVP-DSFTFPNVIKAYGALGREFLG 126
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
IH KS ++ + +AS+L+ +Y ++ +FDE+P R+ WN +IS + S
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
++ ALELF RM +P ++L
Sbjct: 187 GEA-EKALELFG---------------------------------RMESSGFEPNSVSLT 212
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
+ AC + L KEIH ++ + S L++ YG+C CL +R VF KM
Sbjct: 213 VAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP-- 270
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
K +V W+S+I Y G++K+ +E M + G +P T +L ACS +
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 125/287 (43%), Gaps = 43/287 (14%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLV--LKSCTALRRPFLGASIHA 74
+ +I+ ++AL +F + S+ +P+ SL + +C+ L G IH
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRMESS---GFEPNSVSLTVAISACSRLLWLERGKEIHR 232
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLP 134
K F + ++ SAL+++YG C L AR +F ++P ++ V W
Sbjct: 233 KCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAW--------------- 277
Query: 135 AALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
N +I A+ D + + RM+ +P TL ++L A
Sbjct: 278 ------------------NSMIKGYVAKGDSK-SCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
C L K IHGY IR+ + + LI+ Y +CG + VF K + KDV
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ---KDVA 375
Query: 255 -VWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
W+ +IS+Y G A+E + +M GVKPD +TF VL ACS
Sbjct: 376 ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 188 LLALLPACVN-VAALNLIKEIHG----YGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNV 242
LL+LL C N +L IK +H G+R D+V L LI Y C ++R+V
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVV----LCKSLINVYFTCKDHCSARHV 61
Query: 243 FWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGV-KPDGITFLGVLKA 297
F D+ DV +W+SL+S Y+ + LE FK + + PD TF V+KA
Sbjct: 62 FENF-DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 182/344 (52%), Gaps = 32/344 (9%)
Query: 21 ITSHVNQSRHDQAL---TVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAA 77
I ++S D+AL T+F+ + S + + F VLK+C + G IH A
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 78 KSSFLSNPFIASALINLYGHCLSLTSARHLF-------------DEIPHRNEVV-WNAMI 123
K F + F+ S L+ +Y C + AR LF D E+V WN MI
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 124 SLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK-AIALYRRMLELELK 182
Y D AA LF M + ++N +I+ + +G FK A+ ++R M + +++
Sbjct: 216 DGYMRLGDC-KAARMLFDKMR-QRSVVSWNTMISGYSL--NGFFKDAVEVFREMKKGDIR 271
Query: 183 PRLITLLALLPACVNVAALNLIKEIHGY----GIRNDIVPHPQLGSGLIEAYGRCGCLVN 238
P +TL+++LPA + +L L + +H Y GIR D V LGS LI+ Y +CG +
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV----LGSALIDMYSKCGIIEK 327
Query: 239 SRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+ +VF ++ ++V+ WS++I+ +A+HG+A A++ F +M AGV+P + ++ +L AC
Sbjct: 328 AIHVFERLPR--ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Query: 299 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
SH G ++ YF++M G+E +HY C+VD+L R+G L E
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 157/300 (52%), Gaps = 7/300 (2%)
Query: 45 TLPLDPHVFSLVLKSCTALRRPFLG--ASIHAHAAKSSFLSNPFIASALINLYGHCLSLT 102
++P D H F V K+C A + L ++H A + LS+ F + LI +Y +
Sbjct: 110 SVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPID 169
Query: 103 SARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQ 162
SA LFDE P R+ V +N +I + + + A ELF M + + ++N +I+ A
Sbjct: 170 SALQLFDENPQRDVVTYNVLIDGLVKARE-IVRARELFDSMPLR-DLVSWNSLISGYAQM 227
Query: 163 NDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQL 222
N +AI L+ M+ L LKP + +++ L AC K IH Y R + L
Sbjct: 228 NH-CREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFL 286
Query: 223 GSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMA 282
+GL++ Y +CG + + +F D K + W+++I+ A+HG + ++ F++M +
Sbjct: 287 ATGLVDFYAKCGFIDTAMEIFELCSD--KTLFTWNAMITGLAMHGNGELTVDYFRKMVSS 344
Query: 283 GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G+KPDG+TF+ VL CSH+G D+A F +M+ Y V HY C+ D+L RAG + E
Sbjct: 345 GIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEE 404
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 172/356 (48%), Gaps = 33/356 (9%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
F L+ + ++ VF + + D F+ V+K+ R G +H A
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K S+ F+ + LI +YG C + AR +FDE+ N V WNA+I+ D + A
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND-VAGA 191
Query: 137 LELFHLMDVPPNESTFNPIIAA-----------------------------LAAQNDGAF 167
E+F M V N +++N ++A + ++G+F
Sbjct: 192 REIFDKMLVR-NHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSF 250
Query: 168 KAIALYRRMLELE-LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGL 226
LY R L+ + P ++L +L AC + K +HG+ + + + L
Sbjct: 251 NESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNAL 310
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
I+ Y RCG + +R VF M++ + +V W+S+I+ A+HG+ + A+ F EM GV P
Sbjct: 311 IDMYSRCGNVPMARLVFEGMQE-KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTP 369
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
DGI+F+ +L ACSHAG ++ YF+ M+R Y +E +HY C+VD+ R+G+L +
Sbjct: 370 DGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQK 425
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 38/217 (17%)
Query: 131 DSLPAALELFHLMDVP-PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELK-PRLITL 188
D+LP A L L+ P P+ FN ++ + ++D ++A++ M+ P +
Sbjct: 53 DALPYARRL--LLCFPEPDAFMFNTLVRGYS-ESDEPHNSVAVFVEMMRKGFVFPDSFSF 109
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM-- 246
++ A N +L ++H +++ + H +G+ LI YG CGC+ +R VF +M
Sbjct: 110 AFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ 169
Query: 247 ----------------------RDMDKDVVV-----WSSLISAYALHGEAKAALETFKEM 279
R++ ++V W+ +++ Y GE ++A F EM
Sbjct: 170 PNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEM 229
Query: 280 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
D +++ ++ +H G +++ YF +QR
Sbjct: 230 P----HRDDVSWSTMIVGIAHNGSFNESFLYFRELQR 262
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 169/331 (51%), Gaps = 36/331 (10%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T +I+ + + + AL++F +H +P + + F+ V K+C+AL +G +IH
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIH 154
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP--HRNEVVWNAMISLYAHSPD 131
A S N ++S+L+++YG C + +AR +FD + RN V W +MI+ YA +
Sbjct: 155 ARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNAR 214
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
A+ELF +FN AAL + F L ++
Sbjct: 215 G-HEAIELFR---------SFN---AALTSDRANQF-------------------MLASV 242
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
+ AC ++ L K HG R + + + L++ Y +CG L + +F ++R
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIR--CH 300
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 311
V+ ++S+I A A HG +AA++ F EM + P+ +T LGVL ACSH+G ++ L Y
Sbjct: 301 SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYL 360
Query: 312 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ M YGV S HY+C+VD+L R GR+ E
Sbjct: 361 SLMAEKYGVVPDSRHYTCVVDMLGRFGRVDE 391
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 164/328 (50%), Gaps = 37/328 (11%)
Query: 15 LYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHA 74
+ ++ ++T + +A+ +F + S P + + VL +C+ + G +H+
Sbjct: 288 ITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG-VLNACSDICYLEEGKQLHS 346
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLP 134
K F + F +AL+++Y L AR FD + R+ +W ++IS Y + D
Sbjct: 347 FLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSD--- 403
Query: 135 AALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
NE +A+ LYRRM + P T+ ++L A
Sbjct: 404 -------------NE------------------EALILYRRMKTAGIIPNDPTMASVLKA 432
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
C ++A L L K++HG+ I++ +GS L Y +CG L + VF R +KDVV
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF--RRTPNKDVV 490
Query: 255 VWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 314
W+++IS + +G+ ALE F+EM G++PD +TF+ ++ ACSH GF + YF M
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550
Query: 315 QRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G++ DHY+C+VD+LSRAG+L E
Sbjct: 551 SDQIGLDPKVDHYACMVDLLSRAGQLKE 578
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 137/284 (48%), Gaps = 37/284 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDP-HVFSLVLKSCTALRRPFLGASIHAH 75
++ +++ + + R ++A+ VF+ D +VF+ VL S A LG IH
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI 246
Query: 76 AAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPA 135
K+ L +++AL+ +Y C SL A +FD RN + W+AM++ Y+ + +SL
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESL-- 304
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
+A+ L+ RM +KP T++ +L AC
Sbjct: 305 --------------------------------EAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
++ L K++H + ++ H + L++ Y + GCL ++R F ++ ++DV +
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ--ERDVAL 390
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
W+SLIS Y + + + AL ++ M+ AG+ P+ T VLKACS
Sbjct: 391 WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 147/337 (43%), Gaps = 53/337 (15%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPFLGAS 71
++ + LIT + + TV + P+ ++L + K+ ++L+ +G
Sbjct: 80 VVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQ 139
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
HA K S + ++ ++L+ +Y + +F +P RN W+ M+S YA +
Sbjct: 140 AHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA-TRG 198
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
+ A+++F+L E + +D F A+ L+
Sbjct: 199 RVEEAIKVFNLFLREKEE----------GSDSDYVFTAV------------------LSS 230
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM-- 249
L A + V L ++IH I+N ++ L + L+ Y +C S N KM D
Sbjct: 231 LAATIYVG---LGRQIHCITIKNGLLGFVALSNALVTMYSKC----ESLNEACKMFDSSG 283
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
D++ + WS++++ Y+ +GE+ A++ F M AG+KP T +GVL ACS +C
Sbjct: 284 DRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD-------IC 336
Query: 310 YFTRMQR------DYGVEASSDHYSCLVDVLSRAGRL 340
Y ++ G E + LVD+ ++AG L
Sbjct: 337 YLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 177 LELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL 236
+ EL P TLL L L + +HG IR Q + L+ Y +CG L
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 237 VNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAA---LETFKEMEMAGVKPDGITFLG 293
+ ++F + + KDVV W+SLI+ Y+ +G ++ ++ F+EM + P+ T G
Sbjct: 66 AKAHSIFNAI--ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAG 123
Query: 294 VLKA 297
+ KA
Sbjct: 124 IFKA 127
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 155/326 (47%), Gaps = 37/326 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ LI+ + S+ A +F + T + +D ++ CT +LG S+H
Sbjct: 124 YNALISGYTANSKVTDAAYMFRRMKET-GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC 182
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K S + ++ I +Y C S+ + R LFDE+P + + WNA+IS Y+
Sbjct: 183 VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYS--------- 233
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
QN A+ + LY +M + P TL+++L +C
Sbjct: 234 -------------------------QNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCA 268
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
++ A + E+ N VP+ + + I Y RCG L +R VF M K +V W
Sbjct: 269 HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV--KSLVSW 326
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
+++I Y +HG + L F +M G++PDG F+ VL ACSH+G D L F M+R
Sbjct: 327 TAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 386
Query: 317 DYGVEASSDHYSCLVDVLSRAGRLHE 342
+Y +E +HYSCLVD+L RAGRL E
Sbjct: 387 EYKLEPGPEHYSCLVDLLGRAGRLDE 412
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 39/278 (14%)
Query: 27 QSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPF 86
QS ++++++ + + + P D F +LKSC +L P G +H H K + PF
Sbjct: 31 QSLFSESISLYRSMLRSGSSP-DAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPF 89
Query: 87 IASALINLYGHCLSLTSARHLFDEIPHRNE--VVWNAMISLYAHSPDSLPAALELFHLMD 144
+ +ALI++Y C + AR +F+E P ++ V +NA+IS Y
Sbjct: 90 VLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGY------------------ 131
Query: 145 VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLI 204
A + D A+ ++RRM E + +T+L L+P C L L
Sbjct: 132 ------------TANSKVTDAAY----MFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLG 175
Query: 205 KEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYA 264
+ +HG ++ + + + I Y +CG + R +F +M K ++ W+++IS Y+
Sbjct: 176 RSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMP--VKGLITWNAVISGYS 233
Query: 265 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
+G A LE +++M+ +GV PD T + VL +C+H G
Sbjct: 234 QNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 37/267 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + +I+ + L ++ + S+ P DP VL SC L +G +
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP-DPFTLVSVLSSCAHLGAKKIGHEVG 280
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ F+ N F+++A I++Y C +L AR +FD +P ++ V W AMI Y
Sbjct: 281 KLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYG------ 334
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
H M + L+ M++ ++P + +L
Sbjct: 335 ------MHGM----------------------GEIGLMLFDDMIKRGIRPDGAVFVMVLS 366
Query: 194 ACVNVAALNLIKEIHGYGIRN-DIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
AC + + E+ R + P P+ S L++ GR G L + F + ++ D
Sbjct: 367 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAME-FIESMPVEPD 425
Query: 253 VVVWSSLISAYALHGEAKAALETFKEM 279
VW +L+ A +H A F ++
Sbjct: 426 GAVWGALLGACKIHKNVDMAELAFAKV 452
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 150/295 (50%), Gaps = 36/295 (12%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
+ P+ ++ +++ ++ G IHA K F SN + +++++LY C L+ A+H
Sbjct: 211 VTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHY 270
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
F E+ ++ + WN +IS S S
Sbjct: 271 FHEMEDKDLITWNTLISELERSDSS----------------------------------- 295
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
+A+ +++R P T +L+ AC N+AALN +++HG R + +L + LI
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 355
Query: 228 EAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
+ Y +CG + +S+ VF ++ D +++V W+S++ Y HG A+E F +M +G++PD
Sbjct: 356 DMYAKCGNIPDSQRVFGEIVD-RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPD 414
Query: 288 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
I F+ VL AC HAG + L YF M+ +YG+ D Y+C+VD+L RAG++ E
Sbjct: 415 RIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 150/327 (45%), Gaps = 44/327 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +IT + + + + +A FH + T P + S VLKSC ++ GA +H
Sbjct: 79 WTAMITGYASSNYNARAWECFHEMVKQGTSP-NEFTLSSVLKSCRNMKVLAYGALVHGVV 137
Query: 77 AKSSFLSNPFIASALINLYGHC-LSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPA 135
K + ++ +A++N+Y C +++ +A +F +I +N+V W +I+ + H D +
Sbjct: 138 VKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGI-- 195
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRML--ELELKPRLITLLALLP 193
G K +Y++ML E+ P IT+ +
Sbjct: 196 -----------------------------GGLK---MYKQMLLENAEVTPYCITI--AVR 221
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
A ++ ++ K+IH I+ + + + +++ Y RCG L +++ F +M DKD+
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME--DKDL 279
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
+ W++LIS ++ AL F+ E G P+ TF ++ AC++ + R
Sbjct: 280 ITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRL 340
+ R G + + + L+D+ ++ G +
Sbjct: 339 IFRR-GFNKNVELANALIDMYAKCGNI 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 219 HPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKE 278
H L + LI +Y G + +R++F +M D +DVV W+++I+ YA A E F E
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPD--RDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 279 MEMAGVKPDGITFLGVLKACSH 300
M G P+ T VLK+C +
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRN 123
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 140/260 (53%), Gaps = 4/260 (1%)
Query: 83 SNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHL 142
N +A+I+ Y C L A H F P R V W AMI+ Y + + A +F
Sbjct: 184 KNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAK-KVELAEAMFKD 242
Query: 143 MDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALN 202
M V N T+N +I+ +N + L+R MLE ++P L + L C ++AL
Sbjct: 243 MTVNKNLVTWNAMISGYV-ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 203 LIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISA 262
L ++IH ++ + + LI Y +CG L ++ +F M+ KDVV W+++IS
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK--KDVVAWNAMISG 359
Query: 263 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 322
YA HG A AL F+EM ++PD ITF+ VL AC+HAG + + YF M RDY VE
Sbjct: 360 YAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEP 419
Query: 323 SSDHYSCLVDVLSRAGRLHE 342
DHY+C+VD+L RAG+L E
Sbjct: 420 QPDHYTCMVDLLGRAGKLEE 439
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 9 ATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFL 68
+ L+ + +I+ +V SR + L +F + P + S +L C+ L L
Sbjct: 244 TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL-GCSELSALQL 302
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G IH +KS+ ++ ++LI++Y C L A LF+ + ++ V WNAMIS Y
Sbjct: 303 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGY-- 360
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
AQ+ A KA+ L+R M++ +++P IT
Sbjct: 361 --------------------------------AQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 189 LALLPACVNVAALNLIKEIHGYGIRN-DIVPHPQLGSGLIEAYGRCGCL 236
+A+L AC + +N+ +R+ + P P + +++ GR G L
Sbjct: 389 VAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL 437
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 171/346 (49%), Gaps = 6/346 (1%)
Query: 1 MASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC 60
+A+ + H ++ + I+ + + +VF+ + + + F + +C
Sbjct: 182 LAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC 241
Query: 61 TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPH-RNEVVW 119
+L G +H K F + +ALI++Y C SA +F E+ RN + W
Sbjct: 242 ASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISW 301
Query: 120 NAMISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALYRRM 176
N++IS + A+ELF +D + P+ +T+N +I+ + Q +A + RM
Sbjct: 302 NSVISGMMINGQH-ETAVELFEKLDSEGLKPDSATWNSLISGFS-QLGKVIEAFKFFERM 359
Query: 177 LELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL 236
L + + P L L +LL AC ++ L KEIHG+ I+ + + LI+ Y +CG
Sbjct: 360 LSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLS 419
Query: 237 VNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 296
+R +F + KD V W+ +IS Y HGE ++A+E F+ + V+P TF VL
Sbjct: 420 SWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLS 479
Query: 297 ACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
ACSH G + F MQ +YG + S++H C++D+L R+GRL E
Sbjct: 480 ACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLRE 525
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 34/246 (13%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G +H A KS F ++ ++L+++Y C A +F+++PH++ V +NA IS
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS---- 203
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
L +M++ P S FN L R+ E P +T
Sbjct: 204 -------GLMENGVMNLVP--SVFN------------------LMRKFSSEE--PNDVTF 234
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+ + AC ++ L +++HG ++ + +G+ LI+ Y +C C ++ VF +++D
Sbjct: 235 VNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKD 294
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 308
++++ W+S+IS ++G+ + A+E F++++ G+KPD T+ ++ S G +A
Sbjct: 295 -TRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAF 353
Query: 309 CYFTRM 314
+F RM
Sbjct: 354 KFFERM 359
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 164/329 (49%), Gaps = 37/329 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + +I + ++ AL + + +T P D S VL + G IH
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP-DSFTLSSVLPIFSEYVDVIKGKEIH 265
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ + S+ +I S+L+++Y + + +F + R+ + WN++++ Y
Sbjct: 266 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV------ 319
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
QN +A+ L+R+M+ ++KP + +++P
Sbjct: 320 ----------------------------QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIP 351
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC ++A L+L K++HGY +R + + S L++ Y +CG + +R +F +M +D+
Sbjct: 352 ACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE-- 409
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
V W+++I +ALHG A+ F+EM+ GVKP+ + F+ VL ACSH G D+A YF
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M + YG+ +HY+ + D+L RAG+L E
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEE 498
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 17/295 (5%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
+L + +I +QS +AL F + ++ P D +VF VLKSCT + G S+H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCP-DHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSL---TSARHLFDEIPHR-----NEVVWNAMISL 125
+ + + +AL+N+Y L + S ++FDE+P R +E V A +
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV-KAETCI 187
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
DS+ E+ DV ++N IIA A Q+ A+ + R M +LKP
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVV----SYNTIIAGYA-QSGMYEDALRMVREMGTTDLKPDS 242
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
TL ++LP + KEIHGY IR I +GS L++ Y + + +S VF +
Sbjct: 243 FTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSR 302
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
+ +D + W+SL++ Y +G AL F++M A VKP + F V+ AC+H
Sbjct: 303 L--YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 134/271 (49%), Gaps = 36/271 (13%)
Query: 71 SIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSP 130
+IH + KS+FLS+ +++AL +Y + SAR LFDE P ++ WNAMIS Y
Sbjct: 340 AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT--- 396
Query: 131 DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
QN AI+L+R M + E P +T+
Sbjct: 397 -------------------------------QNGLTEDAISLFREMQKSEFSPNPVTITC 425
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
+L AC + AL+L K +H D + + LI Y +CG + +R +F M
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM--TK 483
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 310
K+ V W+++IS Y LHG+ + AL F EM +G+ P +TFL VL ACSHAG +
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 311 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
F M YG E S HY+C+VD+L RAG L
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 40/278 (14%)
Query: 25 VNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSN 84
VN+S H +L+VF H+ + L + ++ + + + R G IH A S
Sbjct: 95 VNESPH-SSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 85 PFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD 144
+ S ++ +Y + AR +FD +P ++ ++WN MIS Y
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYR----------------- 196
Query: 145 VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL--ITLLALLPACVNVAALN 202
+N+ ++I ++R ++ E RL TLL +LPA + L
Sbjct: 197 -----------------KNEMYVESIQVFRDLIN-ESCTRLDTTTLLDILPAVAELQELR 238
Query: 203 LIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISA 262
L +IH + H + +G I Y +CG + +F + R D+V ++++I
Sbjct: 239 LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR--KPDIVAYNAMIHG 296
Query: 263 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
Y +GE + +L FKE+ ++G + T + ++ H
Sbjct: 297 YTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 53/283 (18%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I+ + + A+++F + + P +P + +L +C L LG +H
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSP-NPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
+ F S+ ++++ALI +Y C S+ AR LFD + +NEV WN MIS Y
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGY---------- 496
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
L Q +A+ ++ ML + P +T L +L AC
Sbjct: 497 ---------------------GLHGQGQ---EALNIFYEMLNSGITPTPVTFLCVLYACS 532
Query: 197 NVAALNLIKE--------IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+ L+KE IH YG P + + +++ GR G L + F +
Sbjct: 533 HAG---LVKEGDEIFNSMIHRYGFE----PSVKHYACMVDILGRAGHLQRALQ-FIEAMS 584
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITF 291
++ VW +L+ A +H + A T E ++ + PD + +
Sbjct: 585 IEPGSSVWETLLGACRIHKDTNLA-RTVSE-KLFELDPDNVGY 625
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 144/278 (51%), Gaps = 10/278 (3%)
Query: 68 LGASIHAHAAKSSFLSN-PFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLY 126
LG +H +A K N + +A+I +Y AR +FD + +N V WN MI Y
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGY 150
Query: 127 AHSPDSLPAALELFHLMDVPPNES--TFNPIIAALAAQNDGAFKAIALYRRMLELELKPR 184
S AA + D P ++ +I + +A+ +R M +KP
Sbjct: 151 MRSGQVDNAA----KMFDKMPERDLISWTAMINGFVKKGYQE-EALLWFREMQISGVKPD 205
Query: 185 LITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFW 244
+ ++A L AC N+ AL+ +H Y + D + ++ + LI+ Y RCGC+ +R VF+
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 245 KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 304
M + VV W+S+I +A +G A +L F++M+ G KPD +TF G L ACSH G
Sbjct: 266 NMEK--RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 305 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ L YF M+ DY + +HY CLVD+ SRAGRL +
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLED 361
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 106/262 (40%), Gaps = 51/262 (19%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ +T +I V + ++AL F + + P D L +CT L G +H
Sbjct: 171 LISWTAMINGFVKKGYQEEALLWFREMQISGVKP-DYVAIIAALNACTNLGALSFGLWVH 229
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ F +N ++++LI+LY C + AR +F + R V WN++I +
Sbjct: 230 RYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGF------- 282
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
A N A +++ +R+M E KP +T L
Sbjct: 283 ---------------------------AANGNAHESLVYFRKMQEKGFKPDAVTFTGALT 315
Query: 194 ACVNVAALNLIKEIHGYGIR--------NDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
AC +V L++E G+R I P + L++ Y R G L ++ +
Sbjct: 316 ACSHVG---LVEE----GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQS 368
Query: 246 MRDMDKDVVVWSSLISAYALHG 267
M M + VV SL++A + HG
Sbjct: 369 M-PMKPNEVVIGSLLAACSNHG 389
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 152/311 (48%), Gaps = 37/311 (11%)
Query: 32 QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASAL 91
+A+ F + L +D + F VL +C L G IHA +++F + ++ SAL
Sbjct: 253 EAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 92 INLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNEST 151
I++Y C L A+ +FD + +N V W AM+ Y
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYG------------------------ 347
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
Q A +A+ ++ M + P TL + AC NV++L + HG
Sbjct: 348 ----------QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 212 IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA 271
I + ++ + + + L+ YG+CG + +S +F +M +D V W++++SAYA G A
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV--RDAVSWTAMVSAYAQFGRAVE 455
Query: 272 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 331
++ F +M G+KPDG+T GV+ ACS AG + YF M +YG+ S HYSC++
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 332 DVLSRAGRLHE 342
D+ SR+GRL E
Sbjct: 516 DLFSRSGRLEE 526
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 124/233 (53%), Gaps = 6/233 (2%)
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
LG IH K F S + S L+ +Y + ++ A+ +F + RN V++N+++
Sbjct: 157 LGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
+ + AL+LF M+ + ++ +I LA QN A +AI +R M LK
Sbjct: 217 -ACGMIEDALQLFRGME--KDSVSWAAMIKGLA-QNGLAKEAIECFREMKVQGLKMDQYP 272
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
++LPAC + A+N K+IH IR + H +GS LI+ Y +C CL ++ VF +M+
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
K+VV W++++ Y G A+ A++ F +M+ +G+ PD T + AC++
Sbjct: 333 --QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 39/289 (13%)
Query: 53 FSLVLKSCTAL---RRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFD 109
+S+ +K C L + IH + ++ F+ + +++ Y S T AR +FD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 110 EIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNES-TFNPIIA--ALAAQNDGA 166
IP N WN + L A+S L + +E +P + T+N +I +L+ A
Sbjct: 66 RIPQPNLFSWNNL--LLAYSKAGLISEME-STFEKLPDRDGVTWNVLIEGYSLSGLVGAA 122
Query: 167 FKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGL 226
KA R L +TL+ +L + ++L K+IHG I+ + +GS L
Sbjct: 123 VKAYNTMMRDFSANLTR--VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 227 IEAYGRCGCLVNSRNVFWKM----------------------------RDMDKDVVVWSS 258
+ Y GC+ +++ VF+ + R M+KD V W++
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAA 240
Query: 259 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 307
+I A +G AK A+E F+EM++ G+K D F VL AC G ++
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 114/286 (39%), Gaps = 46/286 (16%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + + ++ +T ++ + R ++A+ +F + + P D + + +C
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP-DHYTLGQAISACA 382
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
+ G+ H A S + ++++L+ LYG C + + LF+E+ R+ V W A
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
M+S Y AQ A + I L+ +M++ L
Sbjct: 443 MVSAY----------------------------------AQFGRAVETIQLFDKMVQHGL 468
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGY----GIRNDIVPHPQLGSGLIEAYGRCGCLV 237
KP +TL ++ AC L+++ Y IVP S +I+ + R G L
Sbjct: 469 KPDGVTLTGVISACSRAG---LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLE 525
Query: 238 NSRNVFWKMRDMDKDVVVWSSLISAYALHGE---AKAALETFKEME 280
+ M D + W++L+SA G K A E+ E++
Sbjct: 526 EAMRFINGM-PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELD 570
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 167/361 (46%), Gaps = 68/361 (18%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLT-LPLDPHVFSLVLKSCTALRRPFLGASI 72
L +I +H +++ + I S+ L D + + ++++CT LR G +
Sbjct: 71 LFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQV 130
Query: 73 HAHAAKSSFLSNPFIASALINLYGH-------------------------------CLSL 101
H + F ++P + + LI+LY C +
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 102 TSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAA 161
AR LF+ +P R+ + WNAMIS YA +S AL +FHLM
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGES-REALNVFHLM------------------ 231
Query: 162 QNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQ 221
Q +G +K + ++++L AC + AL+ + H Y RN I +
Sbjct: 232 QLEG---------------VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVR 276
Query: 222 LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM 281
L + L++ Y +CG + + VFW M + K+V WSS ++ A++G + LE F M+
Sbjct: 277 LATTLVDLYAKCGDMEKAMEVFWGMEE--KNVYTWSSALNGLAMNGFGEKCLELFSLMKQ 334
Query: 282 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
GV P+ +TF+ VL+ CS GF D+ +F M+ ++G+E +HY CLVD+ +RAGRL
Sbjct: 335 DGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLE 394
Query: 342 E 342
+
Sbjct: 395 D 395
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 162/327 (49%), Gaps = 39/327 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I+ ++ +A+ +F + + D + +++ T L G +H++
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMM-IMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
KS + +++ALI++Y C + + +F + + V WN +IS
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS------------ 482
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAF-KAIALYRRMLELELKPRLITLLALLPAC 195
A G F + + +M + E+ P + T L LP C
Sbjct: 483 -----------------------ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
++AA L KEIH +R Q+G+ LIE Y +CGCL NS VF +M +DVV
Sbjct: 520 ASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSR--RDVVT 577
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 315
W+ +I AY ++GE + ALETF +ME +G+ PD + F+ ++ ACSH+G D+ L F +M+
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Query: 316 RDYGVEASSDHYSCLVDVLSRAGRLHE 342
Y ++ +HY+C+VD+LSR+ ++ +
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISK 664
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 151/328 (46%), Gaps = 71/328 (21%)
Query: 32 QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASAL 91
+AL + + + P D + F V+K+C L +G ++ F S+ F+ +AL
Sbjct: 89 EALEFYGKLRESKVSP-DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNAL 147
Query: 92 INLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD---VPPN 148
+++Y LT AR +FDE+P R+ V WN++IS Y+ S ALE++H + + P+
Sbjct: 148 VDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS-SHGYYEEALEIYHELKNSWIVPD 206
Query: 149 ESTFNPIIAALA-----AQNDG----AFKA------------IALY---------RRM-- 176
T + ++ A Q G A K+ +A+Y RR+
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD 266
Query: 177 -----------------LELEL---------------KPRLITLLALLPACVNVAALNLI 204
L+LE+ KP L+T+ ++L AC ++ L+L
Sbjct: 267 EMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLA 326
Query: 205 KEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYA 264
K I+ Y ++ V + + LI+ Y +CG ++ +R+VF M KD V W+S+IS Y
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME--CKDTVSWNSIISGYI 384
Query: 265 LHGEAKAALETFKEMEMAGVKPDGITFL 292
G+ A++ FK M + + D IT+L
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYL 412
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 54 SLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPH 113
S VL++C LR L I+ + K+ F+ + + LI++Y C + +AR +F+ +
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 114 RNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALY 173
++ V WN++IS Y S D LM+ A+ L+
Sbjct: 371 KDTVSWNSIISGYIQSGD----------LME------------------------AMKLF 396
Query: 174 RRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRC 233
+ M+ +E + IT L L+ +A L K +H GI++ I + + LI+ Y +C
Sbjct: 397 KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKC 456
Query: 234 GCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 293
G + +S +F M D V W+++ISA G+ L+ +M + V PD TFL
Sbjct: 457 GEVGDSLKIFSSMG--TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLV 514
Query: 294 VLKACSHAG---FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
L C+ + C R +G E+ + L+++ S+ G L
Sbjct: 515 TLPMCASLAAKRLGKEIHCCLLR----FGYESELQIGNALIEMYSKCGCLE 561
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 43/230 (18%)
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEI-PHRNEVVWNAMISLYAHSP 130
IHA S+ F + LI+ Y H S+ +F + P +N +WN++I ++ +
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN- 84
Query: 131 DSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
P ALE + + V P++ TF +I A A D + +Y ++L++
Sbjct: 85 GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL-VYEQILDM-------- 135
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
G +D+ +G+ L++ Y R G L +R VF +M
Sbjct: 136 -----------------------GFESDLF----VGNALVDMYSRMGLLTRARQVFDEMP 168
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 297
+D+V W+SLIS Y+ HG + ALE + E++ + + PD T VL A
Sbjct: 169 V--RDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 201 LNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLI 260
LN ++ IH I + LI+ Y +S +VF ++ K+V +W+S+I
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA-KNVYLWNSII 78
Query: 261 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ-RDYG 319
A++ +G ALE + ++ + V PD TF V+KAC AG D + Q D G
Sbjct: 79 RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVYEQILDMG 136
Query: 320 VEASSDHYSCLVDVLSRAGRL 340
E+ + LVD+ SR G L
Sbjct: 137 FESDLFVGNALVDMYSRMGLL 157
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 164/338 (48%), Gaps = 42/338 (12%)
Query: 10 THSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLG 69
HS ++ T + + SR ++A ++ + D H F VLK+C + G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
+H K F + ++ + LI+LYG C L AR +FDE+P R+ V WN+MI
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID----- 225
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
AL F D A+ L+R M + +P T+
Sbjct: 226 ------ALVRFGEYD-----------------------SALQLFREM-QRSFEPDGYTMQ 255
Query: 190 ALLPACVNVAALNLIKEIHGYGIRN---DIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
++L AC + +L+L H + +R D+ + + LIE Y +CG L + VF M
Sbjct: 256 SVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 315
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEM--EMAGVKPDGITFLGVLKACSHAGFA 304
+ +D+ W+++I +A HG A+ A+ F M + V+P+ +TF+G+L AC+H GF
Sbjct: 316 QK--RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFV 373
Query: 305 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ YF M RDY +E + +HY C+VD+++RAG + E
Sbjct: 374 NKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 52/259 (20%)
Query: 52 VFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTS-------A 104
+FSL ++C+ + + +HA ++++ P A + LYG L L+S A
Sbjct: 51 IFSLA-ETCSDMSQL---KQLHAFTLRTTYPEEP----ATLFLYGKILQLSSSFSDVNYA 102
Query: 105 RHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQND 164
+FD I + + +WN +I AH DV E F
Sbjct: 103 FRVFDSIENHSSFMWNTLIRACAH---------------DVSRKEEAF------------ 135
Query: 165 GAFKAIALYRRMLEL-ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLG 223
LYR+MLE E P T +L AC + + K++H +++ +
Sbjct: 136 ------MLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVN 189
Query: 224 SGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG 283
+GLI YG CGCL +R VF +M ++ +V W+S+I A GE +AL+ F+EM+ +
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMP--ERSLVSWNSMIDALVRFGEYDSALQLFREMQRS- 246
Query: 284 VKPDGITFLGVLKACSHAG 302
+PDG T VL AC+ G
Sbjct: 247 FEPDGYTMQSVLSACAGLG 265
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 176/346 (50%), Gaps = 23/346 (6%)
Query: 14 LLYFTKLITSHVNQ-----SRHDQALTVFHHIHSTLTL-------PLDP--HVFSLVLKS 59
L+Y KL H N ++ QA V H H ++ L L P H F+ + +
Sbjct: 32 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 91
Query: 60 CTALR--RPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEV 117
+ RP +H+ +S F S+ F + LI Y +L AR +FDE+ R+
Sbjct: 92 SASFSSARPL--RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVP 149
Query: 118 VWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRM- 176
VWNAMI+ Y D + AA+ELF M N +++ +I+ + QN +A+ ++ M
Sbjct: 150 VWNAMITGYQRRGD-MKAAMELFDSMP-RKNVTSWTTVISGFS-QNGNYSEALKMFLCME 206
Query: 177 LELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL 236
+ +KP IT++++LPAC N+ L + + + GY N + + + IE Y +CG +
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMI 266
Query: 237 VNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 296
++ +F ++ + +++ W+S+I + A HG+ AL F +M G KPD +TF+G+L
Sbjct: 267 DVAKRLFEELGN-QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLL 325
Query: 297 ACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
AC H G F M+ + + +HY C++D+L R G+L E
Sbjct: 326 ACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQE 371
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 51/265 (19%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I+ + +AL +F + ++ + VL +C L +G + +A
Sbjct: 182 WTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYA 241
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP-HRNEVVWNAMI-SLYAHSPDSLP 134
++ F N ++ +A I +Y C + A+ LF+E+ RN WN+MI SL H
Sbjct: 242 RENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD-- 299
Query: 135 AALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
+A+ L+ +ML KP +T + LL A
Sbjct: 300 ---------------------------------EALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 195 CVN----VAALNLIK---EIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
CV+ V L K E+H I P + +I+ GR G L + ++ K
Sbjct: 327 CVHGGMVVKGQELFKSMEEVH------KISPKLEHYGCMIDLLGRVGKLQEAYDLI-KTM 379
Query: 248 DMDKDVVVWSSLISAYALHGEAKAA 272
M D VVW +L+ A + HG + A
Sbjct: 380 PMKPDAVVWGTLLGACSFHGNVEIA 404
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 164/338 (48%), Gaps = 37/338 (10%)
Query: 6 YYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTL-TLPLDPHVFSLVLKSCTALR 64
+ S ++ + LI+ + +AL VF + +L D + + V +C L
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490
Query: 65 RPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMIS 124
G +H K+ + N F+ S+LI+LY C A +F + N V WN+MIS
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS 550
Query: 125 LYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPR 184
Y S ++LP EL +I L+ ML + P
Sbjct: 551 CY--SRNNLP---EL-----------------------------SIDLFNLMLSQGIFPD 576
Query: 185 LITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFW 244
+++ ++L A + A+L K +HGY +R I L + LI+ Y +CG + N+F
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 245 KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 304
KM+ K ++ W+ +I Y HG+ AL F EM+ AG PD +TFL ++ AC+H+GF
Sbjct: 637 KMQH--KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFV 694
Query: 305 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ F M++DYG+E + +HY+ +VD+L RAG L E
Sbjct: 695 EEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEE 732
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 38/249 (15%)
Query: 53 FSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP 112
F+ L +C+ G IH K ++P++ ++L+++Y C + A +F +
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 113 HRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIAL 172
+ +WNAM++ YA +ND + A+ L
Sbjct: 335 DKRLEIWNAMVAAYA----------------------------------ENDYGYSALDL 360
Query: 173 YRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGR 232
+ M + + P TL ++ C + N K +H + I + S L+ Y +
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 233 CGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM--EMAGVKPDGIT 290
CGC ++ VF M +KD+V W SLIS +G+ K AL+ F +M + +KPD
Sbjct: 421 CGCDPDAYLVFKSME--EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDI 478
Query: 291 FLGVLKACS 299
V AC+
Sbjct: 479 MTSVTNACA 487
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 139/342 (40%), Gaps = 67/342 (19%)
Query: 21 ITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSS 80
I + + + + QAL ++ + F +LK+C+AL G +IH
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLG 90
Query: 81 FLSNPFIASALINLYGHCLSLTSARHLFDE-------IPHRNEVVWNAMISLYAHSPDSL 133
+ +PFIA++L+N+Y C L A +FD + R+ VWN+MI
Sbjct: 91 WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI---------- 140
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK------AIALYRRMLELELKPRLIT 187
DG FK + +RRML ++P +
Sbjct: 141 ------------------------------DGYFKFRRFKEGVGCFRRMLVFGVRPDAFS 170
Query: 188 LLALLPACVNVAALNLI--KEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
L ++ K+IHG+ +RN + L + LI+ Y + G +++ VF +
Sbjct: 171 LSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVE 230
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH---AG 302
+ D +VV+W+ +I + G +++L+ + + VK +F G L ACS +G
Sbjct: 231 IED-KSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSG 289
Query: 303 FADDALCYFTRMQRDYGVEASSDHYSC--LVDVLSRAGRLHE 342
F C +M +D Y C L+ + S+ G + E
Sbjct: 290 FGRQIHCDVVKMG------LHNDPYVCTSLLSMYSKCGMVGE 325
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 166/342 (48%), Gaps = 38/342 (11%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
AS + A ++ +T +I V +A+ F + T + V S VLK+
Sbjct: 157 ASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVS-VLKAAG 215
Query: 62 ALRRPFLGASIHA-HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
+ G S+H + + FI S+L+++YG C A+ +FDE+P RN V W
Sbjct: 216 KVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWT 275
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE 180
A+I+ Y S F+ K + ++ ML+ +
Sbjct: 276 ALIAGYVQS--------------------RCFD--------------KGMLVFEEMLKSD 301
Query: 181 LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
+ P TL ++L AC +V AL+ + +H Y I+N I + G+ LI+ Y +CGCL +
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 241 NVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
VF ++ + K+V W+++I+ +A HG A+ A + F M + V P+ +TF+ VL AC+H
Sbjct: 362 LVFERLHE--KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAH 419
Query: 301 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G ++ F M+ + +E +DHY+C+VD+ R G L E
Sbjct: 420 GGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEE 461
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Query: 173 YRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGR 232
YR M + P T LL A + N + H + ++ + P + + LI Y
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF-QFHAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 233 CGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 292
G + +F D KDVV W+++I + +G A A+ F EM+ GV + +T +
Sbjct: 151 SGLFDFASRLFDGAED--KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVV 208
Query: 293 GVLKACSHAGFADD 306
VLKA AG +D
Sbjct: 209 SVLKA---AGKVED 219
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 162/340 (47%), Gaps = 49/340 (14%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ ++ I+ + + +AL V + S+ P + + S VL C ++ G IH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS-VLSGCASVGALMHGKEIH 388
Query: 74 AHAAK-------SSFLSNPFIASALINLYGHCLSLTSARHLFDEI--PHRNEVVWNAMIS 124
+A K + + + LI++Y C + +AR +FD + R+ V W MI
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 125 LYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLE--LELK 182
Y+ D A KA+ L M E + +
Sbjct: 449 GYSQHGD----------------------------------ANKALELLSEMFEEDCQTR 474
Query: 183 PRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG-LIEAYGRCGCLVNSRN 241
P T+ L AC ++AAL + K+IH Y +RN P S LI+ Y +CG + ++R
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
VF M M K+ V W+SL++ Y +HG + AL F EM G K DG+T L VL ACSH+
Sbjct: 535 VFDNM--MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Query: 302 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
G D + YF RM+ +GV +HY+CLVD+L RAGRL+
Sbjct: 593 GMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 160/345 (46%), Gaps = 22/345 (6%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + +I S+ + AL +F + + D VL C +L LG +H
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
A S + N F+ + L+++Y C + A +F + ++ V WNAM++ Y+
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ-IGRF 311
Query: 134 PAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
A+ LF M + + T++ I+ A + G ++A+ + R+ML +KP +TL++
Sbjct: 312 EDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG-YEALGVCRQMLSSGIKPNEVTLIS 370
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG--------LIEAYGRCGCLVNSRNV 242
+L C +V AL KEIH Y I+ I G G LI+ Y +C + +R +
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKN-GHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 243 FWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM--EMAGVKPDGITFLGVLKACSH 300
F + ++DVV W+ +I Y+ HG+A ALE EM E +P+ T L AC+
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 301 AG---FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
Y R Q++ S+ CL+D+ ++ G + +
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSN---CLIDMYAKCGSISD 531
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 36/293 (12%)
Query: 16 YFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAH 75
++ LI S+ + ++ L +F +HS P D + F V K+C + G S HA
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTP-DNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 76 AAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPA 135
+ + F+SN F+ +AL+ +Y C SL+ AR +FDE+ + V WN++I YA
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP-KV 211
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
ALE+F R E +P ITL+ +LP C
Sbjct: 212 ALEMFS--------------------------------RMTNEFGCRPDNITLVNVLPPC 239
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
++ +L K++H + + ++++ + +G+ L++ Y +CG + + VF M KDVV
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS--VKDVVS 297
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 308
W+++++ Y+ G + A+ F++M+ +K D +T+ + + G +AL
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 142 LMDVPPNEST---FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNV 198
L PP+++ +N +I + N A K + L+ M L P T + AC +
Sbjct: 82 LRRFPPSDAGVYHWNSLIRSYG-DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI 140
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSS 258
+++ + H + + + +G+ L+ Y RC L ++R VF +M DVV W+S
Sbjct: 141 SSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW--DVVSWNS 198
Query: 259 LISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAG---FADDALCY--FT 312
+I +YA G+ K ALE F M G +PD IT + VL C+ G C+ +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M ++ V +CLVD+ ++ G + E
Sbjct: 259 EMIQNMFVG------NCLVDMYAKCGMMDE 282
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 151/276 (54%), Gaps = 37/276 (13%)
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
LG +IH+ +S F S ++ ++L++LY +C + SA +FD++P ++ V WN++I+ +A
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
+N +A+ALY M +KP T
Sbjct: 66 ----------------------------------ENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
+++LL AC + AL L K +H Y I+ + + + L++ Y RCG + ++ +F +M
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM- 150
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEME-MAGVKPDGITFLGVLKACSHAGFADD 306
+DK+ V W+SLI A++G K A+E FK ME G+ P ITF+G+L ACSH G +
Sbjct: 151 -VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 209
Query: 307 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
YF RM+ +Y +E +H+ C+VD+L+RAG++ +
Sbjct: 210 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 198 VAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWS 257
+A + L + IH IR+ + + L+ Y CG + ++ VF KM +KD+V W+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP--EKDLVAWN 58
Query: 258 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRM 314
S+I+ +A +G+ + AL + EM G+KPDG T + +L AC+ G Y ++
Sbjct: 59 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 315 QRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G+ + + L+D+ +R GR+ E
Sbjct: 119 ----GLTRNLHSSNVLLDLYARCGRVEE 142
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 117/281 (41%), Gaps = 50/281 (17%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLV--LKSCTALRRPFLGAS 71
L+ + +I + ++AL ++ ++S + P F++V L +C + LG
Sbjct: 54 LVAWNSVINGFAENGKPEEALALYTEMNSK---GIKPDGFTIVSLLSACAKIGALTLGKR 110
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
+H + K N ++ L++LY C + A+ LFDE+ +N V W ++
Sbjct: 111 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL--------- 161
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE-LKPRLITLLA 190
I LA G +AI L++ M E L P IT +
Sbjct: 162 ------------------------IVGLAVNGFGK-EAIELFKYMESTEGLLPCEITFVG 196
Query: 191 LLPACVNVAALNLIKEIHGYGIR----NDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
+L AC + ++KE Y R I P + +++ R G V + K
Sbjct: 197 ILYACSHCG---MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG-QVKKAYEYIKS 252
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
M +VV+W +L+ A +HG++ L F +++ ++P+
Sbjct: 253 MPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 291
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 163/317 (51%), Gaps = 33/317 (10%)
Query: 54 SLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPH 113
SLV S A R G S+ AH K F + I + LI+ Y + AR +FDE+P
Sbjct: 876 SLVKASSFASR---FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE 932
Query: 114 RNEVVWNAMISLYAH-----SPDSLPAALE-------------LFHLMDVPPNESTFN-- 153
R+++ W M+S Y S +SL + L ++ ES FN
Sbjct: 933 RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQM 992
Query: 154 PIIAALA--------AQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIK 205
P+ ++ +QN +AIA++ +M+E + P +T+ ++ AC ++ L + K
Sbjct: 993 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 1052
Query: 206 EIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYAL 265
E+H Y ++N V +GS L++ Y +CG L + VF+ + K++ W+S+I A
Sbjct: 1053 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK--KNLFCWNSIIEGLAA 1110
Query: 266 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSD 325
HG A+ AL+ F +MEM VKP+ +TF+ V AC+HAG D+ + M DY + ++ +
Sbjct: 1111 HGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVE 1170
Query: 326 HYSCLVDVLSRAGRLHE 342
HY +V + S+AG ++E
Sbjct: 1171 HYGGMVHLFSKAGLIYE 1187
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 113/254 (44%), Gaps = 37/254 (14%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T +I + R+ +A+ VF+ + +P D S V+ +C L +G +H
Sbjct: 997 IISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIP-DEVTMSTVISACAHLGVLEIGKEVH 1055
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ ++ F+ + +I SAL+++Y C SL A +F +P +N WN+
Sbjct: 1056 MYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNS------------ 1103
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
II LAA A +A+ ++ +M +KP +T +++
Sbjct: 1104 ---------------------IIEGLAAHG-FAQEALKMFAKMEMESVKPNAVTFVSVFT 1141
Query: 194 ACVNVAALNLIKEIHGYGIRN-DIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
AC + ++ + I+ I + IV + + G++ + + G + + + M + + +
Sbjct: 1142 ACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM-EFEPN 1200
Query: 253 VVVWSSLISAYALH 266
V+W +L+ +H
Sbjct: 1201 AVIWGALLDGCRIH 1214
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 158/288 (54%), Gaps = 7/288 (2%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRN 115
V ++C G +H ++ + + +A+I Y C SL AR LFDE+ ++
Sbjct: 240 VFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKD 299
Query: 116 EVVWNAMISLY-AHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYR 174
V + A+IS Y AH + A+ LF M+ ST+N +I+ L QN+ + I +R
Sbjct: 300 SVTYGAIISGYMAHGL--VKEAMALFSEME-SIGLSTWNAMISGLM-QNNHHEEVINSFR 355
Query: 175 RMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG 234
M+ +P +TL +LLP+ + L KEIH + IRN + + + +I+ Y + G
Sbjct: 356 EMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG 415
Query: 235 CLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGV 294
L+ ++ VF +D + ++ W+++I+AYA+HG++ +A F +M+ G KPD +T V
Sbjct: 416 FLLGAQRVFDNCKD--RSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 295 LKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
L A +H+G +D A F M Y +E +HY+C+V VLSRAG+L +
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSD 521
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 138/340 (40%), Gaps = 87/340 (25%)
Query: 11 HSRLLYFT---------KLITSHVNQSRHDQALTVFHHI--------------------- 40
H+R++ F+ KLI+ + Q R QAL VF I
Sbjct: 45 HARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMY 104
Query: 41 ---------------HSTLTLPLDPHVFSLVLKSCTALRRPFLGA---SIHAHAAKSSFL 82
+S+ D S VLK+ + +LG+ +H + F
Sbjct: 105 FDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFD 164
Query: 83 SNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHL 142
S+ F+ + +I Y C ++ SAR +FDE+ R+ V WN+MIS Y+ S
Sbjct: 165 SDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQS------------- 211
Query: 143 MDVPPNESTFNPIIAALAAQNDGAFKAI-ALYRRMLEL-ELKPRLITLLALLPACVNVAA 200
G+F+ +Y+ ML + KP +T++++ AC +
Sbjct: 212 ----------------------GSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSD 249
Query: 201 LNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLI 260
L E+H I N I L + +I Y +CG L +R +F +M +KD V + ++I
Sbjct: 250 LIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS--EKDSVTYGAII 307
Query: 261 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
S Y HG K A+ F EME G+ G+++ H
Sbjct: 308 SGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHH 347
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 150/307 (48%), Gaps = 34/307 (11%)
Query: 32 QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASAL 91
+ +F + +LP +P S LK C G IH FLS+ + + L
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 92 INLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNEST 151
++LY C + T A +FDEIP R+ V WN + S Y N+ T
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR-------------------NKRT 195
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
+ ++ +ND ++ +KP +T L L AC N+ AL+ K++H +
Sbjct: 196 RDVLVLFDKMKND------------VDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI 243
Query: 212 IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA 271
N + L + L+ Y RCG + + VF+ MR+ ++VV W++LIS A++G K
Sbjct: 244 DENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRE--RNVVSWTALISGLAMNGFGKE 301
Query: 272 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR-DYGVEASSDHYSCL 330
A+E F EM G+ P+ T G+L ACSH+G + + +F RM+ ++ ++ + HY C+
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCV 361
Query: 331 VDVLSRA 337
VD+L RA
Sbjct: 362 VDLLGRA 368
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 165/326 (50%), Gaps = 42/326 (12%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
L+ ++ S+ + +F + T L LD ++K+C + +G +H + +
Sbjct: 181 LMKGYLKYSKDPEVFRLFCLMRDT-GLALDALTLICLVKACGNVFAGKVGKCVHGVSIRR 239
Query: 80 SFL-SNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALE 138
SF+ + ++ +++I++Y C L +AR LF+ RN V+W +IS +A
Sbjct: 240 SFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKC--------- 290
Query: 139 LFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNV 198
+ A +A L+R+ML + P TL A+L +C ++
Sbjct: 291 -------------------------ERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSL 325
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM--DKDVVVW 256
+L K +HGY IRN I + I+ Y RCG + +R VF DM +++V+ W
Sbjct: 326 GSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF----DMMPERNVISW 381
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
SS+I+A+ ++G + AL+ F +M+ V P+ +TF+ +L ACSH+G + F M R
Sbjct: 382 SSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441
Query: 317 DYGVEASSDHYSCLVDVLSRAGRLHE 342
DYGV +HY+C+VD+L RAG + E
Sbjct: 442 DYGVVPEEEHYACMVDLLGRAGEIGE 467
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 42/293 (14%)
Query: 53 FSLV--LKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDE 110
F+LV +K+C L G IH A K+ + ++A +L+ +Y ++ SA+ +FDE
Sbjct: 110 FNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDE 169
Query: 111 IPHRNEVVWNAMISLY-AHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKA 169
IP RN V+W ++ Y +S D P LF LM D
Sbjct: 170 IPVRNSVLWGVLMKGYLKYSKD--PEVFRLFCLM-------------------RDTGLAL 208
Query: 170 IALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQ-LGSGLIE 228
AL TL+ L+ AC NV A + K +HG IR + L + +I+
Sbjct: 209 DAL--------------TLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 288
Y +C L N+R +F +D++VV+W++LIS +A A A + F++M + P+
Sbjct: 255 MYVKCRLLDNARKLF--ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQ 312
Query: 289 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
T +L +CS G M R+ G+E + +++ +D+ +R G +
Sbjct: 313 CTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQ 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + ++ ++ +T LI+ R +A +F + LP + + +L SC+
Sbjct: 265 ARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP-NQCTLAAILVSCS 323
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
+L G S+H + ++ + ++ I++Y C ++ AR +FD +P RN + W++
Sbjct: 324 SLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSS 383
Query: 122 MISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAA 158
MI+ + + AL+ FH M +V PN TF +++A
Sbjct: 384 MINAFGING-LFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 87/232 (37%), Gaps = 36/232 (15%)
Query: 71 SIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP--HRNEVVWNAMISLYAH 128
+HA F + S+L N Y L A F+ IP RN WN ++S Y+
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK 84
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
S + + L LY RM L
Sbjct: 85 SKTCCYSDVLL--------------------------------LYNRMRRHCDGVDSFNL 112
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+ + ACV + L IHG ++N + + L+E Y + G + +++ VF ++
Sbjct: 113 VFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIP- 171
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
++ V+W L+ Y + + F M G+ D +T + ++KAC +
Sbjct: 172 -VRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 155/294 (52%), Gaps = 37/294 (12%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D HV KSC L R +G S+H + K+ + ++ F+ S+L+++Y C + AR +F
Sbjct: 115 DDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMF 174
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
DE+P RN V W+ M+ YA ++ AL LF E+ F + A ND +F
Sbjct: 175 DEMPQRNVVTWSGMMYGYAQMGEN-EEALWLF-------KEALFENL-----AVNDYSFS 221
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
++ + C N L L ++IHG I++ +GS L+
Sbjct: 222 SV---------------------ISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVS 260
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 288
Y +CG + VF ++ K++ +W++++ AYA H + +E FK M+++G+KP+
Sbjct: 261 LYSKCGVPEGAYQVFNEVPV--KNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 289 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
ITFL VL ACSHAG D+ YF +M ++ +E + HY+ LVD+L RAGRL E
Sbjct: 319 ITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQE 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 36/246 (14%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRN 115
+L S R G +H + KS P +A+ LIN Y +R F++ P ++
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 116 EVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRR 175
W+++IS +A QN+ + ++ ++
Sbjct: 81 STTWSSIISCFA----------------------------------QNELPWMSLEFLKK 106
Query: 176 MLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGC 235
M+ L+P L + +C ++ ++ + +H ++ +GS L++ Y +CG
Sbjct: 107 MMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGE 166
Query: 236 LVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 295
+V +R +F +M ++VV WS ++ YA GE + AL FKE + + +F V+
Sbjct: 167 IVYARKMFDEMP--QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVI 224
Query: 296 KACSHA 301
C+++
Sbjct: 225 SVCANS 230
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 123/292 (42%), Gaps = 46/292 (15%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ ++ ++ + +++AL +F L ++ + FS V+ C LG IH
Sbjct: 182 VVTWSGMMYGYAQMGENEEALWLFKEALFE-NLAVNDYSFSSVISVCANSTLLELGRQIH 240
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ KSSF S+ F+ S+L++LY C A +F+E+P +N +WNAM+ Y
Sbjct: 241 GLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAY------- 293
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
AQ+ K I L++RM +KP IT L +L
Sbjct: 294 ---------------------------AQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC + ++ + + I P + + L++ GR G L + V M +D
Sbjct: 327 ACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNM-PIDPTE 385
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
VW +L+++ +H K E+A D + LG + + H ++
Sbjct: 386 SVWGALLTSCTVH----------KNTELAAFAADKVFELGPVSSGMHISLSN 427
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 168/330 (50%), Gaps = 41/330 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ L+ + R + AL VF + + + H + VL + T G SIH A
Sbjct: 230 WNALVNGYSQIFRFEDALLVFSKMREE-GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLA 288
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K+ S+ +++ALI++YG L A +F+ + R+ WN+++ ++ + D
Sbjct: 289 VKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGD----- 343
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
+DG +AL+ RML ++P ++TL +LP C
Sbjct: 344 --------------------------HDGT---LALFERMLCSGIRPDIVTLTTVLPTCG 374
Query: 197 NVAALNLIKEIHGY----GIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
+A+L +EIHGY G+ N + + + L++ Y +CG L ++R VF MR KD
Sbjct: 375 RLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRV--KD 432
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
W+ +I+ Y + + AL+ F M AGVKPD ITF+G+L+ACSH+GF ++ +
Sbjct: 433 SASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLA 492
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+M+ Y + +SDHY+C++D+L RA +L E
Sbjct: 493 QMETVYNILPTSDHYACVIDMLGRADKLEE 522
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 38/253 (15%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSN-PFIASALINLYGHCLSLTSARHLFDEIPHR 114
L+ C + G IH + FL + P ++L+N+Y C + A +F R
Sbjct: 66 TLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SER 124
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYR 174
+ +NA+IS + N A+ YR
Sbjct: 125 DVFGYNALISGFV----------------------------------VNGSPLDAMETYR 150
Query: 175 RMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG 234
M + P T +LL + L+ +K++HG + +GSGL+ +Y +
Sbjct: 151 EMRANGILPDKYTFPSLLKGS-DAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFM 209
Query: 235 CLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGV 294
+ +++ VF ++ D D D V+W++L++ Y+ + AL F +M GV T V
Sbjct: 210 SVEDAQKVFDELPDRD-DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSV 268
Query: 295 LKACSHAGFADDA 307
L A + +G D+
Sbjct: 269 LSAFTVSGDIDNG 281
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 111/283 (39%), Gaps = 41/283 (14%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A+S + + L + ++ H HD L +F + + P D + VL +C
Sbjct: 316 ANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRP-DIVTLTTVLPTCG 374
Query: 62 ALRRPFLGASIHAHAAKSSFL----SNPFIASALINLYGHCLSLTSARHLFDEIPHRNEV 117
L G IH + S L SN FI ++L+++Y C L AR +FD + ++
Sbjct: 375 RLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSA 434
Query: 118 VWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRML 177
WN MI+ Y Q+ G A+ ++ M
Sbjct: 435 SWNIMINGY---------------------------------GVQSCGEL-ALDMFSCMC 460
Query: 178 ELELKPRLITLLALLPACVNVAALNLIKE-IHGYGIRNDIVPHPQLGSGLIEAYGRCGCL 236
+KP IT + LL AC + LN + + +I+P + +I+ GR L
Sbjct: 461 RAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKL 520
Query: 237 VNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM 279
+ + D + VVW S++S+ LHG AL K +
Sbjct: 521 EEAYELAISKPICD-NPVVWRSILSSCRLHGNKDLALVAGKRL 562
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 178 ELELKPR------LITLLALLPACVNVAALNLIKEIHGYGIRNDIVPH-PQLGSGLIEAY 230
++E P+ + T +A L C ++IHG+ +R + P+ G+ L+ Y
Sbjct: 47 QIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMY 106
Query: 231 GRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGIT 290
+CG + + VF ++DV +++LIS + ++G A+ET++EM G+ PD T
Sbjct: 107 AKCGLMRRAVLVFGGS---ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYT 163
Query: 291 FLGVLKACSHAGFAD 305
F +LK +D
Sbjct: 164 FPSLLKGSDAMELSD 178
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 160/324 (49%), Gaps = 18/324 (5%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I +H + + L +F + + P D F +LK+CT + G IH+
Sbjct: 451 WNAIIAAHEQNGKGYETLFLFVSMLRSRIEP-DEFTFGSILKACTGGSLGY-GMEIHSSI 508
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
KS SN + +LI++Y C + A + R V
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV-------------SGTMEE 555
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
LE H + ++N II+ + A L+ RM+E+ + P T +L C
Sbjct: 556 LEKMHNKRLQEMCVSWNSIISGYVMKEQSE-DAQMLFTRMMEMGITPDKFTYATVLDTCA 614
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
N+A+ L K+IH I+ ++ + S L++ Y +CG L +SR +F K + +D V W
Sbjct: 615 NLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK--SLRRDFVTW 672
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
+++I YA HG+ + A++ F+ M + +KP+ +TF+ +L+AC+H G D L YF M+R
Sbjct: 673 NAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 732
Query: 317 DYGVEASSDHYSCLVDVLSRAGRL 340
DYG++ HYS +VD+L ++G++
Sbjct: 733 DYGLDPQLPHYSNMVDILGKSGKV 756
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 154/349 (44%), Gaps = 65/349 (18%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +IT + + +AL +FH + S+ L D S V ++C ++ G I+ A
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSS-GLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
KSS + +A+A I++YG C +L A +FDE+ R+ V WNA+I+ AH
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIA--AHE------- 459
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
QN ++ + L+ ML ++P T ++L AC
Sbjct: 460 -------------------------QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 494
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL-----VNSR-----NVFWKM 246
+L EIH +++ + + +G LI+ Y +CG + ++SR NV M
Sbjct: 495 G-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTM 553
Query: 247 RDMDKD--------VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+++K V W+S+IS Y + +++ A F M G+ PD T+ VL C
Sbjct: 554 EELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Query: 299 SH---AGFADDALCYFTRMQRDYGVEASSDHYSC--LVDVLSRAGRLHE 342
++ AG + E SD Y C LVD+ S+ G LH+
Sbjct: 614 ANLASAGLGKQIHAQVIKK------ELQSDVYICSTLVDMYSKCGDLHD 656
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 150/337 (44%), Gaps = 61/337 (18%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
++ +I V + AL F + + + +++ VL+SC AL LG +HAHA
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQK-VNAGVSQSIYASVLRSCAALSELRLGGQLHAHA 307
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
KS F ++ + +A +++Y C ++ A+ LFD + N +NAMI+ Y
Sbjct: 308 LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY---------- 357
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
+Q + FKA+ L+ R++ L I+L + AC
Sbjct: 358 ------------------------SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 393
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
V L+ +I+G I++ + + + I+ YG+C L + VF +MR +D V W
Sbjct: 394 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR--RRDAVSW 451
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
+++I+A+ +G+ L F M + ++PD TF +LKAC+
Sbjct: 452 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLG------------ 499
Query: 317 DYGVE----------ASSDHYSC-LVDVLSRAGRLHE 342
YG+E AS+ C L+D+ S+ G + E
Sbjct: 500 -YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 535
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 5/247 (2%)
Query: 53 FSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP 112
FS V K C LG HAH S F F+ + L+ +Y + SA +FD++P
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 113 HRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIAL 172
R+ V WN MI+ Y+ S D A F++M V + ++N +++ QN + K+I +
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKAN-SFFNMMPV-RDVVSWNSMLSGY-LQNGESLKSIEV 167
Query: 173 YRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGR 232
+ M ++ T +L C + +L +IHG +R S L++ Y +
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 233 CGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 292
V S VF + +K+ V WS++I+ + AL+ FKEM+ +
Sbjct: 228 GKRFVESLRVFQGIP--EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 293 GVLKACS 299
VL++C+
Sbjct: 286 SVLRSCA 292
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 178/380 (46%), Gaps = 60/380 (15%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGA------ 70
+ L++++V S+ ++A +F + + + + V K R F +
Sbjct: 191 WNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV 250
Query: 71 ------------SIHAHAAKSSFLSNP----FIASALINLYGHCLSLTSARHLFDEIPHR 114
S A+ F +P F +A+++ Y + AR LFD++P R
Sbjct: 251 VSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER 310
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMDVPP--NESTFNPIIAALA------------ 160
NEV WNAM++ Y + + A ELF DV P N ST+N +I A
Sbjct: 311 NEVSWNAMLAGYVQG-ERMEMAKELF---DVMPCRNVSTWNTMITGYAQCGKISEAKNLF 366
Query: 161 ------------------AQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALN 202
+Q+ +F+A+ L+ +M + + + L C +V AL
Sbjct: 367 DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE 426
Query: 203 LIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISA 262
L K++HG ++ +G+ L+ Y +CG + + ++F +M KD+V W+++I+
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM--AGKDIVSWNTMIAG 484
Query: 263 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 322
Y+ HG + AL F+ M+ G+KPD T + VL ACSH G D YF M +DYGV
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544
Query: 323 SSDHYSCLVDVLSRAGRLHE 342
+S HY+C+VD+L RAG L +
Sbjct: 545 NSQHYACMVDLLGRAGLLED 564
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 44/252 (17%)
Query: 26 NQSRHD-QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSN 84
+QS H +AL +F + L+ FS L +C + LG +H K + +
Sbjct: 385 SQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 85 PFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD 144
F+ +AL+ +Y C S+ A LF E+ ++ V WN MI+ Y+
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG-------------- 489
Query: 145 VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLI 204
F + A+ + M LKP T++A+L AC + ++
Sbjct: 490 -------FGEV-------------ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 205 KEIHGYGIRND--IVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM--DKDVVVWSSLI 260
++ + Y + D ++P+ Q + +++ GR G L ++ N+ M++M + D +W +L+
Sbjct: 530 RQ-YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNL---MKNMPFEPDAAIWGTLL 585
Query: 261 SAYALHGEAKAA 272
A +HG + A
Sbjct: 586 GASRVHGNTELA 597
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 164/327 (50%), Gaps = 38/327 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
F +I +VN ++AL ++ + P D + +LK+CT L+ G IH
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEP-DNFTYPCLLKACTRLKSIREGKQIHGQV 158
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K ++ F+ ++LIN+YG C + + +F+++ + W++M+S A
Sbjct: 159 FKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA--------RAG 210
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRML-ELELKPRLITLLALLPAC 195
+ ++ + + L+R M E LK +++ L AC
Sbjct: 211 MGMWS--------------------------ECLLLFRGMCSETNLKAEESGMVSALLAC 244
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
N ALNL IHG+ +RN + + + L++ Y +CGCL + ++F KM ++ +
Sbjct: 245 ANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEK--RNNLT 302
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 315
+S++IS ALHGE ++AL F +M G++PD + ++ VL ACSH+G + F M
Sbjct: 303 YSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEML 362
Query: 316 RDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ VE +++HY CLVD+L RAG L E
Sbjct: 363 KEGKVEPTAEHYGCLVDLLGRAGLLEE 389
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 164/333 (49%), Gaps = 38/333 (11%)
Query: 44 LTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTS 103
L + D F VLKS + L +LG ++HA K+ + F+ +L+++Y L
Sbjct: 120 LGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKH 179
Query: 104 ARHLFDEIPHRNE----VVWNAMISLYAHSPD---------SLPA--------------- 135
A +F+E P R + ++WN +I+ Y + D S+P
Sbjct: 180 AFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVD 239
Query: 136 ------ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
A +LF LM N ++ +I + D AI+ Y MLE LKP T+
Sbjct: 240 SGELNRAKQLFELMP-EKNVVSWTTLINGFSQTGDYE-TAISTYFEMLEKGLKPNEYTIA 297
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
A+L AC AL IHGY + N I +G+ L++ Y +CG L + VF M
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH- 356
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
KD++ W+++I +A+HG A++ F++M +G KPD + FL VL AC ++ D L
Sbjct: 357 -KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLN 415
Query: 310 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+F M+ DY +E + HY +VD+L RAG+L+E
Sbjct: 416 FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNE 448
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 171/345 (49%), Gaps = 42/345 (12%)
Query: 1 MASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLV--LK 58
MA + + ++ FT +I+ +++ + +L +F + + + + P+ +LV L
Sbjct: 393 MAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL---VKVKISPNEITLVSILP 449
Query: 59 SCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVV 118
L LG +H K F + I A+I++Y C + A +F+ + R+ V
Sbjct: 450 VIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS 509
Query: 119 WNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLE 178
WN+MI+ AQ+D AI ++R+M
Sbjct: 510 WNSMITR----------------------------------CAQSDNPSAAIDIFRQMGV 535
Query: 179 LELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVN 238
+ +++ A L AC N+ + + K IHG+ I++ + S LI+ Y +CG L
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595
Query: 239 SRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKA 297
+ NVF M++ K++V W+S+I+A HG+ K +L F EM E +G++PD ITFL ++ +
Sbjct: 596 AMNVFKTMKE--KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653
Query: 298 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
C H G D+ + +F M DYG++ +HY+C+VD+ RAGRL E
Sbjct: 654 CCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 698
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 143/299 (47%), Gaps = 37/299 (12%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
AS + + + + + +I+ +V +++LT F+ + S+ LP D FS +L S +
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP-DAITFSSLLPSVS 351
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
IH + + S + F+ SALI+ Y C ++ A+++F + + VV+ A
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
MIS Y H N ++ ++R ++++++
Sbjct: 412 MISGYLH----------------------------------NGLYIDSLEMFRWLVKVKI 437
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
P ITL+++LP + AL L +E+HG+ I+ +G +I+ Y +CG + +
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
+F ++ +D+V W+S+I+ A AA++ F++M ++G+ D ++ L AC++
Sbjct: 498 IFERLS--KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 123/303 (40%), Gaps = 46/303 (15%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I+S V +QAL + + P D F ++K+C AL+ F G +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSP-DVSTFPCLVKACVALKN-FKGIDFLSDT 163
Query: 77 AKSSFLS-NPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSP--DSL 133
S + N F+AS+LI Y + LFD + ++ V+WN M++ YA DS+
Sbjct: 164 VSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
+ + + PN TF+ +L
Sbjct: 224 IKGFSVMRMDQISPNAVTFD------------------------------------CVLS 247
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
C + ++L ++HG + + + + + L+ Y +CG ++ +F M D
Sbjct: 248 VCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR--ADT 305
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS---HAGFADDALCY 310
V W+ +IS Y G + +L F EM +GV PD ITF +L + S + + CY
Sbjct: 306 VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCY 365
Query: 311 FTR 313
R
Sbjct: 366 IMR 368
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 36/243 (14%)
Query: 53 FSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP 112
F VL C + LG +H S I ++L+++Y C A LF +
Sbjct: 242 FDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS 301
Query: 113 HRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIAL 172
+ V WN MIS Y S LM+ +++
Sbjct: 302 RADTVTWNCMISGYVQS-----------GLME-----------------------ESLTF 327
Query: 173 YRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGR 232
+ M+ + P IT +LLP+ L K+IH Y +R+ I L S LI+AY +
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFK 387
Query: 233 CGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 292
C + ++N+F + + DVVV++++IS Y +G +LE F+ + + P+ IT +
Sbjct: 388 CRGVSMAQNIFSQCNSV--DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLV 445
Query: 293 GVL 295
+L
Sbjct: 446 SIL 448
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 50/264 (18%)
Query: 50 PHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFD 109
P SL+L++C+ G +HA +S + + ++ +Y C S + +F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 110 EIPHRNEVV--WNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
+ R + WN++IS + +N
Sbjct: 95 RLDLRRSSIRPWNSIISSFV----------------------------------RNGLLN 120
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVP------HPQ 221
+A+A Y +ML + P + T L+ ACV +K G +D V +
Sbjct: 121 QALAFYFKMLCFGVSPDVSTFPCLVKACV------ALKNFKGIDFLSDTVSSLGMDCNEF 174
Query: 222 LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM 281
+ S LI+AY G + +F R + KD V+W+ +++ YA G + ++ F M M
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLF--DRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 232
Query: 282 AGVKPDGITFLGVLKACSHAGFAD 305
+ P+ +TF VL C+ D
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLID 256
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 169 AIALYRRMLEL--------ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHP 220
AIA Y++ L L E PR ++LL L AC N L K++H + I N I
Sbjct: 13 AIAPYKKSLPLRNSSRFLEETIPRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDS 70
Query: 221 QLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEME 280
++ Y CG + +F+++ + W+S+IS++ +G AL + +M
Sbjct: 71 YTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKML 130
Query: 281 MAGVKPDGITFLGVLKAC 298
GV PD TF ++KAC
Sbjct: 131 CFGVSPDVSTFPCLVKAC 148
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 177/351 (50%), Gaps = 49/351 (13%)
Query: 31 DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASA 90
++ ++++ + P D + F+ VLK+C+ L G + H + F+ N ++ +A
Sbjct: 94 EKTVSLYTEMEKRGVSP-DRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNA 152
Query: 91 LINLYGHC---------------------LSLTS----------ARHLFDEIPHRNEVVW 119
LI + +C S+TS A LFDE+P++++V W
Sbjct: 153 LILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAW 212
Query: 120 NAMIS--LYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK-AIALYRRM 176
N MI+ L DS + F DV T+N +I+ N G K A+ +++ M
Sbjct: 213 NVMITGCLKCKEMDSARELFDRFTEKDV----VTWNAMISGYV--NCGYPKEALGIFKEM 266
Query: 177 LELELKPRLITLLALLPACVNVAALNLIKEIHGY-----GIRNDIVPHPQLGSGLIEAYG 231
+ P ++T+L+LL AC + L K +H Y + + I + + LI+ Y
Sbjct: 267 RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYA 326
Query: 232 RCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITF 291
+CG + + VF ++D +D+ W++LI ALH A+ ++E F+EM+ V P+ +TF
Sbjct: 327 KCGSIDRAIEVFRGVKD--RDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTF 383
Query: 292 LGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+GV+ ACSH+G D+ YF+ M+ Y +E + HY C+VD+L RAG+L E
Sbjct: 384 IGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEE 434
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 64/234 (27%)
Query: 132 SLPAALELFHLM--DVP-PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
S+P AL+ H + ++P P+ S N ++ +AQ+ K ++LY M + + P T
Sbjct: 57 SVPGALKYAHKLFDEIPKPDVSICNHVLRG-SAQSMKPEKTVSLYTEMEKRGVSPDRYTF 115
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL----------VN 238
+L AC + + HG +R+ V + + + LI + CG L
Sbjct: 116 TFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAK 175
Query: 239 SRNVFW---------------------------------------KMRDMD--------- 250
+ V W K ++MD
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 251 --KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
KDVV W+++IS Y G K AL FKEM AG PD +T L +L AC+ G
Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 150/325 (46%), Gaps = 36/325 (11%)
Query: 18 TKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAA 77
T L+ + R AL +F + T + D VFS+VLK+C +L LG IHA A
Sbjct: 254 TGLMVGYTQAGRARDALKLFVDL-VTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVA 312
Query: 78 KSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAAL 137
K S + + L++ Y C S SA F EI N+V W+A+IS Y A+
Sbjct: 313 KLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMS-QFEEAV 371
Query: 138 ELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVN 197
+ F + N S N T ++ AC
Sbjct: 372 KTFKSLR-SKNASILNSF-------------------------------TYTSIFQACSV 399
Query: 198 VAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWS 257
+A N+ ++H I+ ++ S LI Y +CGCL ++ VF M + D+V W+
Sbjct: 400 LADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDN--PDIVAWT 457
Query: 258 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 317
+ IS +A +G A AL F++M G+KP+ +TF+ VL ACSHAG + M R
Sbjct: 458 AFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRK 517
Query: 318 YGVEASSDHYSCLVDVLSRAGRLHE 342
Y V + DHY C++D+ +R+G L E
Sbjct: 518 YNVAPTIDHYDCMIDIYARSGLLDE 542
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 118/279 (42%), Gaps = 42/279 (15%)
Query: 25 VNQSRHDQALTVFHHIHS--TLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFL 82
V+ S+H + F + + + + + + ++C LR G +H +
Sbjct: 56 VSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMG--I 113
Query: 83 SNP--FIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELF 140
NP + + ++ +Y C SL A LFDE+ N V MIS YA
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQG---------- 163
Query: 141 HLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAA 200
++D KA+ L+ ML KP LL + VN A
Sbjct: 164 -ILD-----------------------KAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRA 199
Query: 201 LNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLI 260
L+ ++IH + IR + + + +G++ Y +CG LV ++ VF +M K V + L+
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM--AVKKPVACTGLM 257
Query: 261 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
Y G A+ AL+ F ++ GV+ D F VLKAC+
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
++ +I+ + S+ ++A+ F + S L+ ++ + ++C+ L +G +HA A
Sbjct: 354 WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADA 413
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K S + + + SALI +Y C L A +F+ + + + V W A IS +A+ ++ A
Sbjct: 414 IKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA-SEA 472
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
L LF +M+ +KP +T +A+L AC
Sbjct: 473 LRLFE---------------------------------KMVSCGMKPNSVTFIAVLTACS 499
Query: 197 NVAALNLIKEIHGYGIRN-DIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
+ + K +R ++ P +I+ Y R G L++ F K + D +
Sbjct: 500 HAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSG-LLDEALKFMKNMPFEPDAMS 558
Query: 256 WSSLISAYALH 266
W +S H
Sbjct: 559 WKCFLSGCWTH 569
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 174/324 (53%), Gaps = 7/324 (2%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+ +++V Q +AL VF+ + + P + S + SC+ LR G S H + ++
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS-AISSCSQLRNILWGKSCHGYVLRN 366
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
F S I +ALI++Y C +A +FD + ++ V WN++++ Y + + + AA E
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE-VDAAWET 425
Query: 140 FHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE-LKPRLITLLALLPACVNV 198
F M N ++N II+ L Q +AI ++ M E + +T++++ AC ++
Sbjct: 426 FETMP-EKNIVSWNTIISGLV-QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL 483
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSS 258
AL+L K I+ Y +N I +LG+ L++ + RCG ++ ++F + ++DV W++
Sbjct: 484 GALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL--TNRDVSAWTA 541
Query: 259 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 318
I A A+ G A+ A+E F +M G+KPDG+ F+G L ACSH G F M + +
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 319 GVEASSDHYSCLVDVLSRAGRLHE 342
GV HY C+VD+L RAG L E
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEE 625
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 38/294 (12%)
Query: 8 SATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF 67
S ++ + LI + + ++A+ +F + ++ P D + F L +C R
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISP-DKYTFPFGLSACAKSRAKG 151
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
G IH K + + F+ ++L++ Y C L SAR +FDE+ RN V W +MI YA
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
D A++LF M V E T P +T
Sbjct: 212 RR-DFAKDAVDLFFRM-VRDEEVT-------------------------------PNSVT 238
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRND-IVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
++ ++ AC + L ++++ + IRN I + + S L++ Y +C + ++ +F +
Sbjct: 239 MVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
+ D+ +++ S Y G + AL F M +GV+PD I+ L + +CS
Sbjct: 298 GASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Query: 131 DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
+SL A E+F + +N +I A+ +AI L+ RM+ + P T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSG-LCNEAILLFLRMMNSGISPDKYTFPF 139
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
L AC A +IHG ++ + + L+ Y CG L ++R VF +M +
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE-- 197
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALC 309
++VV W+S+I YA AK A++ F M V P+ +T + V+ AC+ +
Sbjct: 198 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 310 YFTRMQRDYGVEASSDHYSCLVDV 333
+ + R+ G+E + S LVD+
Sbjct: 258 VYAFI-RNSGIEVNDLMVSALVDM 280
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 174/324 (53%), Gaps = 7/324 (2%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+ +++V Q +AL VF+ + + P + S + SC+ LR G S H + ++
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS-AISSCSQLRNILWGKSCHGYVLRN 366
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
F S I +ALI++Y C +A +FD + ++ V WN++++ Y + + + AA E
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE-VDAAWET 425
Query: 140 FHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE-LKPRLITLLALLPACVNV 198
F M N ++N II+ L Q +AI ++ M E + +T++++ AC ++
Sbjct: 426 FETMP-EKNIVSWNTIISGLV-QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL 483
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSS 258
AL+L K I+ Y +N I +LG+ L++ + RCG ++ ++F + ++DV W++
Sbjct: 484 GALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL--TNRDVSAWTA 541
Query: 259 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 318
I A A+ G A+ A+E F +M G+KPDG+ F+G L ACSH G F M + +
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 319 GVEASSDHYSCLVDVLSRAGRLHE 342
GV HY C+VD+L RAG L E
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEE 625
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 38/294 (12%)
Query: 8 SATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF 67
S ++ + LI + + ++A+ +F + ++ P D + F L +C R
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISP-DKYTFPFGLSACAKSRAKG 151
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
G IH K + + F+ ++L++ Y C L SAR +FDE+ RN V W +MI YA
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
D A++LF M + + E+ P +T
Sbjct: 212 RR-DFAKDAVDLFFRM--------------------------------VRDEEVTPNSVT 238
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRND-IVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
++ ++ AC + L ++++ + IRN I + + S L++ Y +C + ++ +F +
Sbjct: 239 MVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
+ D+ +++ S Y G + AL F M +GV+PD I+ L + +CS
Sbjct: 298 GASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Query: 131 DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
+SL A E+F + +N +I A+ +AI L+ RM+ + P T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSG-LCNEAILLFLRMMNSGISPDKYTFPF 139
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
L AC A +IHG ++ + + L+ Y CG L ++R VF +M +
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE-- 197
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALC 309
++VV W+S+I YA AK A++ F M V P+ +T + V+ AC+ +
Sbjct: 198 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 310 YFTRMQRDYGVEASSDHYSCLVDV 333
+ + R+ G+E + S LVD+
Sbjct: 258 VYAFI-RNSGIEVNDLMVSALVDM 280
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 177/331 (53%), Gaps = 11/331 (3%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + +I+ ++ + +AL +F+ + + D + V+ +C L G +H
Sbjct: 284 VILWNSMISGYIANNMKMEALVLFNEMRNETRE--DSRTLAAVINACIGLGFLETGKQMH 341
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
HA K + + +AS L+++Y C S A LF E+ + ++ N+MI +Y S +
Sbjct: 342 CHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVY-FSCGRI 400
Query: 134 PAALELFHLMDVPPNES--TFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
A +F ++ N+S ++N + + QN + + + +M +L+L ++L ++
Sbjct: 401 DDAKRVFERIE---NKSLISWNSMTNGFS-QNGCTVETLEYFHQMHKLDLPTDEVSLSSV 456
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
+ AC ++++L L +++ + + S LI+ Y +CG + + R VF M +
Sbjct: 457 ISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM--VKS 514
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 311
D V W+S+IS YA +G+ A++ FK+M +AG++P ITF+ VL AC++ G ++ F
Sbjct: 515 DEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLF 574
Query: 312 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M+ D+G +H+SC+VD+L+RAG + E
Sbjct: 575 ESMKVDHGFVPDKEHFSCMVDLLARAGYVEE 605
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 126/311 (40%), Gaps = 72/311 (23%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNPFI-ASALINLYGHCLSLTSARHLFDEIPHR 114
+L+SC++ R L + K FLS+ I A+ L+ +Y + AR+LFDE+P R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNES-TFNPIIAALAAQ----------- 162
N WN MI Y +S + +L F +M P + ++N +++ A
Sbjct: 92 NYFSWNTMIEGYMNSGEK-GTSLRFFDMM--PERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 163 -------------------NDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNL 203
N A +A+ L++ EL ITL +L AC + AL
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFK---ELNFSADAITLTTVLKACAELEALKC 205
Query: 204 IKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL--------------------------- 236
K+IH + + ++ S L+ Y +CG L
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 237 ---VN-SRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 292
VN SR +F R ++ V++W+S+IS Y + AL F EM + D T
Sbjct: 266 CGRVNESRGLF--DRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLA 322
Query: 293 GVLKACSHAGF 303
V+ AC GF
Sbjct: 323 AVINACIGLGF 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 146/341 (42%), Gaps = 46/341 (13%)
Query: 31 DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASA 90
++AL +F L D + VLK+C L G IHA + + S+
Sbjct: 172 EEALRLFKE----LNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSS 227
Query: 91 LINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNES 150
L+N+Y C L A ++ ++I ++ +A+IS YA+ E L D N
Sbjct: 228 LVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC----GRVNESRGLFDRKSNRC 283
Query: 151 T--FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIH 208
+N +I+ A N+ +A+ L+ M E + TL A++ AC+ + L K++H
Sbjct: 284 VILWNSMISGYIA-NNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMH 341
Query: 209 ----GYGIRNDIVP-------HPQLGS--------------------GLIEAYGRCGCLV 237
+G+ +DIV + + GS +I+ Y CG +
Sbjct: 342 CHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRID 401
Query: 238 NSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 297
+++ VF ++ +K ++ W+S+ + ++ +G LE F +M + D ++ V+ A
Sbjct: 402 DAKRVFERIE--NKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA 459
Query: 298 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 338
C+ + F R G+++ S L+D+ + G
Sbjct: 460 CASISSLELGEQVFARATI-VGLDSDQVVSSSLIDLYCKCG 499
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 167/339 (49%), Gaps = 40/339 (11%)
Query: 6 YYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
+ S ++ + +I++ V D+ L + + + +D + +L + + LR
Sbjct: 376 FLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ-GFKIDYITVTALLSAASNLRN 434
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDE--IPHRNEVVWNAMI 123
+G HA + + + S LI++Y + ++ LF+ R++ WN+MI
Sbjct: 435 KEIGKQTHAFLIRQG-IQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
Query: 124 SLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKP 183
S Y QN K ++R+MLE ++P
Sbjct: 494 SGYT----------------------------------QNGHTEKTFLVFRKMLEQNIRP 519
Query: 184 RLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVF 243
+T+ ++LPAC + +++L K++HG+ IR + + + S L++ Y + G + + ++F
Sbjct: 520 NAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF 579
Query: 244 WKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGF 303
+ ++ ++ V ++++I Y HG + A+ F M+ +G+KPD ITF+ VL ACS++G
Sbjct: 580 SQTKE--RNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGL 637
Query: 304 ADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
D+ L F M+ Y ++ SS+HY C+ D+L R GR++E
Sbjct: 638 IDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNE 676
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 81 FLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELF 140
++ + F+ S+ I++Y + S+R +FD RN VWN MI +Y + D L ++ELF
Sbjct: 247 YVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN-DCLVESIELF 305
Query: 141 HLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAA 200
L + E + + LAA A + + L R
Sbjct: 306 -LEAIGSKEIVSDEVTYLLAASAVSALQQVELGR-------------------------- 338
Query: 201 LNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLI 260
+ HG+ +N + + L+ Y RCG + S VF MR+ +DVV W+++I
Sbjct: 339 -----QFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE--RDVVSWNTMI 391
Query: 261 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
SA+ +G L EM+ G K D IT +L A S+
Sbjct: 392 SAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASN 431
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 107/255 (41%), Gaps = 49/255 (19%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTS----- 103
D + +S LK+C + G ++H H + S+ + ++L+N+Y CL+
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 104 -ARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQ 162
R +FD + +N V WN +IS Y + +
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKT-------------------------------GR 194
Query: 163 NDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIR--NDIVPHP 220
N A + + M+ +E+KP ++ + + PA ++ +G ++ ++ V
Sbjct: 195 NAEACRQFGI---MMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDL 251
Query: 221 QLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEME 280
+ S I Y G + +SR VF +++++ VW+++I Y + ++E F +E
Sbjct: 252 FVVSSAISMYAELGDIESSRRVFDSC--VERNIEVWNTMIGVYVQNDCLVESIELF--LE 307
Query: 281 MAGVKP---DGITFL 292
G K D +T+L
Sbjct: 308 AIGSKEIVSDEVTYL 322
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 141/293 (48%), Gaps = 36/293 (12%)
Query: 50 PHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFD 109
P FS+VLK+C+A + G IHA K++F S+ FI SALI LY S F
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFA 417
Query: 110 EIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKA 169
++ W +MI + QN+ A
Sbjct: 418 STSKQDIASWTSMIDCHV----------------------------------QNEQLESA 443
Query: 170 IALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEA 229
L+R++ ++P T+ ++ AC + AAL+ ++I GY I++ I + + I
Sbjct: 444 FDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISM 503
Query: 230 YGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGI 289
Y + G + + VF ++++ DV +S++IS+ A HG A AL F+ M+ G+KP+
Sbjct: 504 YAKSGNMPLANQVFIEVQN--PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQ 561
Query: 290 TFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
FLGVL AC H G L YF M+ DY + + H++CLVD+L R GRL +
Sbjct: 562 AFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSD 614
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 40/315 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTA-LRRPFL--GASIH 73
+ LI+ +V ++ L + +H L L + VLK+C L F+ G +IH
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRD-GLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ AK + + +AL+++Y SL A LF +P +N V +NAMIS +
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF------- 328
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
L++ + D +E AFK L+ M L+P T +L
Sbjct: 329 ---LQMDEITDEASSE----------------AFK---LFMDMQRRGLEPSPSTFSVVLK 366
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC L ++IH +N+ +GS LIE Y G + F +D+
Sbjct: 367 ACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS--KQDI 424
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
W+S+I + + + ++A + F+++ + ++P+ T ++ AC A FA AL +
Sbjct: 425 ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSAC--ADFA--ALSSGEQ 480
Query: 314 MQRDYGVEASSDHYS 328
+Q Y +++ D ++
Sbjct: 481 IQ-GYAIKSGIDAFT 494
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 125/301 (41%), Gaps = 46/301 (15%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
LD + ++ ++ LG H H KSS ++ + L+N+Y C L AR L
Sbjct: 45 LDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQL 104
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
FD +P RN + +N++IS Y + +
Sbjct: 105 FDRMPERNIISFNSLISGYTQ--------MGFYE-------------------------- 130
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
+A+ L+ E LK T L C L+L + +HG + N + L + LI
Sbjct: 131 QAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLI 190
Query: 228 EAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
+ Y +CG L + ++F + + +D V W+SLIS Y G A+ L +M G+
Sbjct: 191 DMYSKCGKLDQAMSLFDRCDE--RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLT 248
Query: 288 GITFLGVLKACS---HAGFADDAL---CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
VLKAC + GF + + CY ++ ++ + + L+D+ ++ G L
Sbjct: 249 TYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVR----TALLDMYAKNGSLK 304
Query: 342 E 342
E
Sbjct: 305 E 305
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 124/300 (41%), Gaps = 53/300 (17%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ F LI+ + ++QA+ +F L LD ++ L C LG +H
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREA-NLKLDKFTYAGALGFCGERCDLDLGELLH 171
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ F+ + LI++Y C L A LFD R++V WN++IS Y +
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR----V 227
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
AA E +L+ ++R L L L ++L
Sbjct: 228 GAAEEPLNLL--------------------------AKMHRDGLNL----TTYALGSVLK 257
Query: 194 AC---VNVAALNLIKEIHGY----GIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
AC +N + IH Y G+ DIV + L++ Y + G L + +F M
Sbjct: 258 ACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVR----TALLDMYAKNGSLKEAIKLFSLM 313
Query: 247 RDMDKDVVVWSSLISAYALHGE-----AKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
K+VV ++++IS + E + A + F +M+ G++P TF VLKACS A
Sbjct: 314 P--SKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAA 371
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 160/299 (53%), Gaps = 9/299 (3%)
Query: 49 DPHVFSLVLKSC-----TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTS 103
D + S+VLK+ T + L +HA K + + +AL++ Y L S
Sbjct: 134 DGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLES 193
Query: 104 ARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQN 163
AR +F+ + N V +MIS Y + + A E+F+ V + +N ++ +
Sbjct: 194 ARTVFETMKDENVVCCTSMISGYMNQ-GFVEDAEEIFNTTKVK-DIVVYNAMVEGFSRSG 251
Query: 164 DGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLG 223
+ A +++ +Y M P + T +++ AC + + + +++H +++ + H ++G
Sbjct: 252 ETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMG 311
Query: 224 SGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG 283
S L++ Y +CG + ++R VF +M++ K+V W+S+I Y +G + ALE F M+
Sbjct: 312 SSLLDMYAKCGGINDARRVFDQMQE--KNVFSWTSMIDGYGKNGNPEEALELFTRMKEFR 369
Query: 284 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++P+ +TFLG L ACSH+G D F MQRDY ++ +HY+C+VD++ RAG L++
Sbjct: 370 IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNK 428
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 105/264 (39%), Gaps = 59/264 (22%)
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
P G IHA K+ F + I+ L+ L+ C L+ AR +FDE+P +N MIS
Sbjct: 50 PKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISG 109
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
Y + L L M ++ + L A N I PR
Sbjct: 110 YLKH-GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMIL-----------PR- 156
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
+L + +H I+ D+ L + L++ Y + G L ++R VF
Sbjct: 157 ----------------SLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 246 MRDMD-----------------------------KDVVVWSSLISAYALHGE-AKAALET 275
M+D + KD+VV+++++ ++ GE AK +++
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 276 FKEMEMAGVKPDGITFLGVLKACS 299
+ M+ AG P+ TF V+ ACS
Sbjct: 261 YISMQRAGFHPNISTFASVIGACS 284
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 163/327 (49%), Gaps = 42/327 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPFLGASIHA 74
+T LI+ + R AL F+ + L P+ F+L V+K+ A RR G +H
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQM---LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLP 134
K F SN + SAL++LY + A+ +FD + RN+V WNA+I+ +A
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA------- 238
Query: 135 AALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
+ G KA+ L++ ML +P + +L A
Sbjct: 239 ---------------------------RRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
C + L K +H Y I++ G+ L++ Y + G + ++R +F ++ +DVV
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL--AKRDVV 329
Query: 255 VWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 314
W+SL++AYA HG K A+ F+EM G++P+ I+FL VL ACSH+G D+ Y+ M
Sbjct: 330 SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM 389
Query: 315 QRDYGVEASSDHYSCLVDVLSRAGRLH 341
++D G+ + HY +VD+L RAG L+
Sbjct: 390 KKD-GIVPEAWHYVTVVDLLGRAGDLN 415
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 43/300 (14%)
Query: 46 LPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSAR 105
+P D ++ +LK CT + G +HAH +S F + + + L+N+Y C SL AR
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQ 162
+F+++P R+ V W +IS Y+ D AL F+ M PNE T + +I A AA+
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQH-DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 163 NDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQL 222
G C ++HG+ ++ + +
Sbjct: 175 RRG-----------------------------CCG-------HQLHGFCVKCGFDSNVHV 198
Query: 223 GSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMA 282
GS L++ Y R G + +++ VF + ++ V W++LI+ +A + ALE F+ M
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALE--SRNDVSWNALIAGHARRSGTEKALELFQGMLRD 256
Query: 283 GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G +P ++ + ACS GF + M + G + + + L+D+ +++G +H+
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGNTLLDMYAKSGSIHD 315
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 171/365 (46%), Gaps = 44/365 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I+ ++ QAL +F + +P + S V +C+ L+ G+ +H+ A
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV-SACSCLKVINQGSEVHSIA 378
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR---------------------- 114
K F+ + + ++L+++Y C L AR +FD + ++
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAY 438
Query: 115 -------------NEVVWNAMISLYAHSPDSLPAALELFHLMD----VPPNESTFNPIIA 157
N + WN MIS Y + D A++LF M+ V N +T+N IIA
Sbjct: 439 ELFTRMQDANLRPNIITWNTMISGYIKNGDE-GEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 158 ALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIV 217
QN +A+ L+R+M P +T+L+LLPAC N+ +++EIHG +R ++
Sbjct: 498 GYI-QNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLD 556
Query: 218 PHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFK 277
+ + L + Y + G + SR +F M KD++ W+SLI Y LHG AL F
Sbjct: 557 AIHAVKNALTDTYAKSGDIEYSRTIFLGMET--KDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 278 EMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRA 337
+M+ G+ P+ T ++ A G D+ F + DY + + +H S +V + RA
Sbjct: 615 QMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRA 674
Query: 338 GRLHE 342
RL E
Sbjct: 675 NRLEE 679
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 164/378 (43%), Gaps = 41/378 (10%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + S L ++ +I ++ ++R + +F + LP D +F +L+ C
Sbjct: 134 ARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLP-DDFLFPKILQGCA 192
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
G IH+ K S ++++++ +Y C L A F + R+ + WN+
Sbjct: 193 NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNS 252
Query: 122 MISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAA----------------- 161
++ Y + A+EL M+ + P T+N +I
Sbjct: 253 VLLAYCQNGKH-EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETF 311
Query: 162 -----------------QNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLI 204
N ++A+ ++R+M + P +T+++ + AC + +N
Sbjct: 312 GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG 371
Query: 205 KEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYA 264
E+H ++ + +G+ L++ Y +CG L ++R VF ++ +KDV W+S+I+ Y
Sbjct: 372 SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK--NKDVYTWNSMITGYC 429
Query: 265 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 324
G A E F M+ A ++P+ IT+ ++ G +A+ F RM++D V+ ++
Sbjct: 430 QAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNT 489
Query: 325 DHYSCLVDVLSRAGRLHE 342
++ ++ + G+ E
Sbjct: 490 ATWNLIIAGYIQNGKKDE 507
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 42/289 (14%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNP--FIASALINLYGHCLSLTSARHLFDEIPH 113
+L+SC LG +HA + + P F+ + L+++Y C + AR +FD +
Sbjct: 87 LLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRE 143
Query: 114 RNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALY 173
RN W+AMI Y+ A +LF LM DG L+
Sbjct: 144 RNLFTWSAMIGAYSRENRWREVA-KLFRLM------------------MKDGVLPDDFLF 184
Query: 174 RRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRC 233
++L+ C N + K IH I+ + ++ + ++ Y +C
Sbjct: 185 PKILQ---------------GCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 234 GCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 293
G L + F +MR ++DV+ W+S++ AY +G+ + A+E KEME G+ P +T+
Sbjct: 230 GELDFATKFFRRMR--ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 294 VLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ + G D A+ +M+ +G+ A ++ ++ L G ++
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKME-TFGITADVFTWTAMISGLIHNGMRYQ 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHG-YGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
K + T L LL +C++ +++L + +H +G+ + P + + L+ Y +CGC+ ++R
Sbjct: 78 KVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTE--PDVFVETKLLSMYAKCGCIADAR 135
Query: 241 NVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
VF MR+ +++ WS++I AY+ + + F+ M GV PD F +L+ C++
Sbjct: 136 KVFDSMRE--RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN 193
Query: 301 AG 302
G
Sbjct: 194 CG 195
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 154/337 (45%), Gaps = 36/337 (10%)
Query: 6 YYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
Y SA ++ T +++ + + D A+ F L + +D +L C
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQ-LCMKIDAVALVGILHGCKKSSH 362
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
+G S+H +A KS + + + LI +Y + + LF+++ + WN++IS
Sbjct: 363 IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 422
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
S + A E+FH M ML L P
Sbjct: 423 CVQSGRA-STAFEVFHQM--------------------------------MLTGGLLPDA 449
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
IT+ +LL C + LNL KE+HGY +RN+ + + LI+ Y +CG V + +VF
Sbjct: 450 ITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKS 509
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
++ W+S+IS Y+L G AL + EM G+KPD ITFLGVL AC+H GF D
Sbjct: 510 IKA--PCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVD 567
Query: 306 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ F M +++G+ + HY+ +V +L RA E
Sbjct: 568 EGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTE 604
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 43/288 (14%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVF--SLVLKSCTALRRPF--LG 69
L YF L+ S ++ +T+F + L L P+ F S+ L++ T F
Sbjct: 13 LSYFHSLLKSCIHGEISSSPITIFRDL---LRSSLTPNHFTMSIFLQATTTSFNSFKLQV 69
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
+ H KS ++ ++L+NLY +TSA+ LFDE+P R+ VVWNA+I Y+
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS-- 127
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
+N A L+ ML+ P TL+
Sbjct: 128 --------------------------------RNGYECDAWKLFIVMLQQGFSPSATTLV 155
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
LLP C ++ + +HG ++ + Q+ + LI Y +C L ++ +F +M+
Sbjct: 156 NLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMK-- 213
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 297
DK V W+++I AY+ G + A+ FK M V+ +T + +L A
Sbjct: 214 DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 118/284 (41%), Gaps = 44/284 (15%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + +I+ V R A VFH + T L D + +L C+ L LG +H
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH 472
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ +++F + F+ +ALI++Y C + A +F I WN+MIS Y+ S
Sbjct: 473 GYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG--- 529
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
L H +A++ Y M E LKP IT L +L
Sbjct: 530 -----LQH--------------------------RALSCYLEMREKGLKPDEITFLGVLS 558
Query: 194 AC-----VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
AC V+ + I +GI + + H L GL+ GR + + WKM D
Sbjct: 559 ACNHGGFVDEGKICFRAMIKEFGI-SPTLQHYALMVGLL---GRACLFTEALYLIWKM-D 613
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 292
+ D VW +L+SA +H E + ++M M K G+ L
Sbjct: 614 IKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVL 657
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 42/237 (17%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G S+H AAKS + + +ALI+ Y C L SA LF E+ ++ V WN MI Y+
Sbjct: 170 GRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQ 229
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
S Q + AI +++ M E ++ +T+
Sbjct: 230 S------------------------------GLQEE----AITVFKNMFEKNVEISPVTI 255
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+ LL A V+ L+ + + G+ NDI + + L+ AY RCGCLV++ ++ +
Sbjct: 256 INLLSAHVSHEPLHCL--VVKCGMVNDI----SVVTSLVCAYSRCGCLVSAERLYASAKQ 309
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
+V +S++S YA G+ A+ F + +K D + +G+L C + D
Sbjct: 310 --DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 179/329 (54%), Gaps = 11/329 (3%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ LI S++ + +L +F H+ ++ P + SL+ +C++ + G ++H A
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSY-GVALHGQA 112
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K FL +PF+ ++ + YG L S+R +FD+I + V N+++ + + + A
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE-MDYA 171
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE---LKPRLITLLALLP 193
E F M V + ++ +I + + A KA+ ++ M++ E + P T +++L
Sbjct: 172 FEYFQRMPVT-DVVSWTTVINGFSKKGLHA-KALMVFGEMIQNERAVITPNEATFVSVLS 229
Query: 194 ACVNV--AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
+C N + L K+IHGY + +I+ LG+ L++ YG+ G L + +F ++RD K
Sbjct: 230 SCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD--K 287
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 311
V W+++ISA A +G K ALE F+ M+ + V P+GIT L +L AC+ + D + F
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Query: 312 TRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
+ + +Y + +S+HY C+VD++ RAG L
Sbjct: 348 SSICSEYKIIPTSEHYGCVVDLIGRAGLL 376
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 167/339 (49%), Gaps = 36/339 (10%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + + + ++ +T +I + + +A+ +F + P D + + VL C
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP-DVYTVTAVLNCCA 408
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
R G +H ++ + F+++AL+++Y C S+ A +F E+ ++ + WN
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
+I Y+ + + AL LF+L+ + E
Sbjct: 469 IIGGYSKNCYA-NEALSLFNLL--------------------------------LEEKRF 495
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
P T+ +LPAC +++A + +EIHGY +RN + + L++ Y +CG L+ +
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
+F + KD+V W+ +I+ Y +HG K A+ F +M AG++ D I+F+ +L ACSH+
Sbjct: 556 LFDDI--ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Query: 302 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
G D+ +F M+ + +E + +HY+C+VD+L+R G L
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 139/306 (45%), Gaps = 37/306 (12%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
AS + + L++ L+ ++ +F + S+ + +D + FS V KS +
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCVSKSFS 206
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
+LR G +H KS F + ++L+ Y + SAR +FDE+ R+ + WN+
Sbjct: 207 SLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNS 266
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
+I+ Y N A K ++++ +ML +
Sbjct: 267 IINGYV----------------------------------SNGLAEKGLSVFVQMLVSGI 292
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
+ L T++++ C + ++L + +H G++ + + L++ Y +CG L +++
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
VF +M D + VV ++S+I+ YA G A A++ F+EME G+ PD T VL C+
Sbjct: 353 VFREMSD--RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 302 GFADDA 307
D+
Sbjct: 411 RLLDEG 416
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 147/346 (42%), Gaps = 51/346 (14%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + T ++ + +I +V+ ++ L+VF + + + +D V C
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCA 307
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
R LG ++H+ K+ F + L+++Y C L SA+ +F E+ R+ V + +
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
MI+ YA LA + A+ L+ M E +
Sbjct: 368 MIAGYARE----------------------------GLAGE------AVKLFEEMEEEGI 393
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
P + T+ A+L C L+ K +H + ND+ + + L++ Y +CG + +
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFK-EMEMAGVKPDGITFLGVLKACSH 300
VF +MR KD++ W+++I Y+ + A AL F +E PD T VL AC+
Sbjct: 454 VFSEMR--VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA- 510
Query: 301 AGFADDALCYFTRMQRDYGVEASSDHYS------CLVDVLSRAGRL 340
+L F + + +G + ++S LVD+ ++ G L
Sbjct: 511 ------SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 180 ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNS 239
++ PR TL ++L C + +L KE+ + N V LGS L Y CG L +
Sbjct: 91 DIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEA 148
Query: 240 RNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
VF +++ ++K + W+ L++ A G+ ++ FK+M +GV+ D TF V K+ S
Sbjct: 149 SRVFDEVK-IEK-ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFS 206
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 158/314 (50%), Gaps = 44/314 (14%)
Query: 32 QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASAL 91
+AL +F + L P F +L++ +L L IH K + F SAL
Sbjct: 437 EALNIFRDMRFRLIRP-SLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSAL 495
Query: 92 INLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNEST 151
I++Y +C L +R +FDE+ ++ V+WN+M + Y ++ AL LF
Sbjct: 496 IDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSEN-EEALNLF----------- 543
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELEL---KPRLITLLALLPACVNVAALNLIKEIH 208
LEL+L +P T ++ A N+A++ L +E H
Sbjct: 544 -------------------------LELQLSRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 209 GYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGE 268
++ + +P + + L++ Y +CG ++ F +DVV W+S+IS+YA HGE
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAF--DSAASRDVVCWNSVISSYANHGE 636
Query: 269 AKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYS 328
K AL+ ++M G++P+ ITF+GVL ACSHAG +D L F M R +G+E ++HY
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYV 695
Query: 329 CLVDVLSRAGRLHE 342
C+V +L RAGRL++
Sbjct: 696 CMVSLLGRAGRLNK 709
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 148/294 (50%), Gaps = 42/294 (14%)
Query: 11 HSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGA 70
+ ++ +T L++ + + H +A+ +F + S L D + S +L SC +L G
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLHALGFGT 370
Query: 71 SIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSP 130
+HA+ K++ ++ ++ ++LI++Y C LT AR +FD + V++NAMI Y+
Sbjct: 371 QVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR-- 428
Query: 131 DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
L EL +A+ ++R M ++P L+T ++
Sbjct: 429 --LGTQWEL---------------------------HEALNIFRDMRFRLIRPSLLTFVS 459
Query: 191 LLPACVNVAALNLIKEIHG----YGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
LL A ++ +L L K+IHG YG+ DI GS LI+ Y C CL +SR VF +M
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKYGLNLDIFA----GSALIDVYSNCYCLKDSRLVFDEM 515
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
+ KD+V+W+S+ + Y E + AL F E++++ +PD TF ++ A +
Sbjct: 516 K--VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 48/288 (16%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFL--GASIHA 74
+T +I+ V R +L +F+ + +P D ++ S VL +C+ L PFL G IHA
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVP-DGYILSTVLSACSIL--PFLEGGKQIHA 273
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLP 134
H + + + + LI+ Y C + +A LF+ +P++N + W ++S Y
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK------- 326
Query: 135 AALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
QN +A+ L+ M + LKP + ++L +
Sbjct: 327 ---------------------------QNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM--DKD 252
C ++ AL ++H Y I+ ++ + + LI+ Y +C CL ++R VF D+ D
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF----DIFAAAD 415
Query: 253 VVVWSSLISAYALHG---EAKAALETFKEMEMAGVKPDGITFLGVLKA 297
VV+++++I Y+ G E AL F++M ++P +TF+ +L+A
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 136/302 (45%), Gaps = 41/302 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTAL--RRPFLGAS 71
L+ ++ ++++ + ++++L VF T + ++ S +++C+ L R ++
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQ 169
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
+ + KS F + ++ + LI+ Y ++ AR +FD +P ++ V W MIS
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
S + ++ L+ +++E + P L +
Sbjct: 230 S----------------------------------YVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
L AC + L K+IH + +R + L + LI++Y +CG ++ + +F M + K
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN--K 313
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS--HA-GFADDAL 308
+++ W++L+S Y + K A+E F M G+KPD +L +C+ HA GF
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 309 CY 310
Y
Sbjct: 374 AY 375
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 119/302 (39%), Gaps = 37/302 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + + +V QS +++AL +F + + P D F+ ++ + L LG H
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERP-DEFTFANMVTAAGNLASVQLGQEFH 578
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
K NP+I +AL+++Y C S A FD R+ V WN++IS YA+ +
Sbjct: 579 CQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGK 638
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
A + + +M+ ++P IT + +L
Sbjct: 639 KA----------------------------------LQMLEKMMSEGIEPNYITFVGVLS 664
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC + + + +R I P + ++ GR G L +R + KM
Sbjct: 665 ACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKM-PTKPAA 723
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
+VW SL+S A G + A E EM + D +F + + G +A R
Sbjct: 724 IVWRSLLSGCAKAGNVELA-EHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRER 782
Query: 314 MQ 315
M+
Sbjct: 783 MK 784
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 40/260 (15%)
Query: 84 NPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH---SPDSLPAALELF 140
+ ++++ LINLY + AR +F+++P RN V W+ M+S H +SL LE +
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 141 HLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAA 200
PNE + I A + + R + +L+ L+
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRG--------RWMVFQLQSFLVK------------- 176
Query: 201 LNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLI 260
G D+ +G+ LI+ Y + G + +R VF + + K V W+++I
Sbjct: 177 ---------SGFDRDVY----VGTLLIDFYLKDGNIDYARLVFDALPE--KSTVTWTTMI 221
Query: 261 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGV 320
S G + +L+ F ++ V PDG VL ACS F + + R YG+
Sbjct: 222 SGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGL 280
Query: 321 EASSDHYSCLVDVLSRAGRL 340
E + + L+D + GR+
Sbjct: 281 EMDASLMNVLIDSYVKCGRV 300
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 174/344 (50%), Gaps = 10/344 (2%)
Query: 1 MASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC 60
MA + + + +I+ + +++++ + + L P + LVL +C
Sbjct: 188 MARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLL-LVLSAC 246
Query: 61 TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
+ ++ L +H + ++ + + +AL+N Y C + A +F + R+ + W
Sbjct: 247 SKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWT 306
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF-KAIALYRRMLEL 179
+++ Y + L A F M V S I L A G F +++ ++R M
Sbjct: 307 SIVKGYVERGN-LKLARTYFDQMPVRDRISWTIMIDGYLRA---GCFNESLEIFREMQSA 362
Query: 180 ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNS 239
+ P T++++L AC ++ +L + + I Y +N I +G+ LI+ Y +CGC +
Sbjct: 363 GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKA 422
Query: 240 RNVFWKMRDMD-KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+ VF DMD +D W++++ A +G+ + A++ F +M+ ++PD IT+LGVL AC
Sbjct: 423 QKVF---HDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC 479
Query: 299 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+H+G D A +F +M+ D+ +E S HY C+VD+L RAG + E
Sbjct: 480 NHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKE 523
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 113/289 (39%), Gaps = 74/289 (25%)
Query: 49 DPHVFSLVLKSCTALRRP----FLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSA 104
D H F +L L+R G +H H K SN ++ +AL+ +Y C + A
Sbjct: 133 DSHTFPFLL---NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMA 189
Query: 105 RHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQND 164
R +FD + WN MIS Y + ++EL
Sbjct: 190 RGVFDRRCKEDVFSWNLMISGYNRMKE-YEESIELL------------------------ 224
Query: 165 GAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGS 224
+ + R ++ P +TLL +L AC V +L K +H Y P +L +
Sbjct: 225 -----VEMERNLVS----PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 225 GLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAA------------ 272
L+ AY CG + + +F M+ +DV+ W+S++ Y G K A
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMK--ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR 333
Query: 273 -------------------LETFKEMEMAGVKPDGITFLGVLKACSHAG 302
LE F+EM+ AG+ PD T + VL AC+H G
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 43/274 (15%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I ++ +++L +F + S +P D VL +C L +G I +
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIP-DEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K+ ++ + +ALI++Y C A+ +F ++ R++ W AM
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM-------------- 440
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
+ LA G +AI ++ +M ++ ++P IT L +L AC
Sbjct: 441 -------------------VVGLANNGQGQ-EAIKVFFQMQDMSIQPDDITYLGVLSACN 480
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLG--SGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
+ ++ ++ +R+D P L +++ GR G + + + KM M+ + +
Sbjct: 481 HSGMVDQARKFFA-KMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM-PMNPNSI 538
Query: 255 VWSSLISAYALHG-EAKAALETFKEMEMAGVKPD 287
VW +L+ A LH E A L K +E+ +PD
Sbjct: 539 VWGALLGASRLHNDEPMAELAAKKILEL---EPD 569
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 148/297 (49%), Gaps = 38/297 (12%)
Query: 48 LDPHVFSL--VLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSAR 105
++P FS+ LK+C L+ +G IHA K + + + L+ LY AR
Sbjct: 232 IEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDAR 291
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG 165
+FD + RN V WN++IS+ + E+F+L
Sbjct: 292 KVFDGMSERNVVTWNSLISVLSKKV----RVHEMFNL----------------------- 324
Query: 166 AFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG 225
+R+M E + TL +LPAC VAAL KEIH +++ P L +
Sbjct: 325 -------FRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS 377
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
L++ YG+CG + SR VF M + KD+ W+ +++ YA++G + + F+ M +GV
Sbjct: 378 LMDMYGKCGEVEYSRRVFDVM--LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA 435
Query: 286 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
PDGITF+ +L CS G + L F RM+ ++ V + +HY+CLVD+L RAG++ E
Sbjct: 436 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKE 492
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 119/293 (40%), Gaps = 41/293 (13%)
Query: 13 RLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASI 72
R FTK + ++ D+A+T+ + S+ + P ++ +L +C + + G I
Sbjct: 95 RQFVFTKPL-GLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKI 153
Query: 73 HAHAAKS-SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRN---EVVWNAMISLYAH 128
+ + S NP + S LI L+ C L AR +FD++ + E VW AM Y+
Sbjct: 154 CSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYS- 212
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
+N A+ +Y ML ++P ++
Sbjct: 213 ---------------------------------RNGSPRDALIVYVDMLCSFIEPGNFSI 239
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
L ACV++ L + + IH ++ + + L++ Y G ++R VF M
Sbjct: 240 SVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS- 298
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
+++VV W+SLIS + F++M+ + T +L ACS
Sbjct: 299 -ERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 37/326 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I ++V +A+ +F + P D V L +C L G IH +
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG-ALHACADLGDLERGRFIHKLS 363
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
+ N + ++LI++Y C + +A +F ++ R V WNAMI +A
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA--------- 414
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
QN A+ + +M +KP T ++++ A
Sbjct: 415 -------------------------QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
++ + K IHG +R+ + + + + L++ Y +CG ++ +R +F M + + V W
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE--RHVTTW 507
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
+++I Y HG KAALE F+EM+ +KP+G+TFL V+ ACSH+G + L F M+
Sbjct: 508 NAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE 567
Query: 317 DYGVEASSDHYSCLVDVLSRAGRLHE 342
+Y +E S DHY +VD+L RAGRL+E
Sbjct: 568 NYSIELSMDHYGAMVDLLGRAGRLNE 593
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 44/292 (15%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
+LY T ++ S D+AL F + P+ + F+ +LK C +G IH
Sbjct: 101 VLYHT-MLKGFAKVSDLDKALQFFVRMRYDDVEPV-VYNFTYLLKVCGDEAELRVGKEIH 158
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
KS F + F + L N+Y C + AR +FD +P R+ V WN +++ Y+
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS------ 212
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
QN A A+ + + M E LKP IT++++LP
Sbjct: 213 ----------------------------QNGMARMALEMVKSMCEENLKPSFITIVSVLP 244
Query: 194 ACVNVAALNLI---KEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
A V+AL LI KEIHGY +R+ + + L++ Y +CG L +R +F M ++
Sbjct: 245 A---VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM--LE 299
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
++VV W+S+I AY + K A+ F++M GVKP ++ +G L AC+ G
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 38/272 (13%)
Query: 28 SRHDQALTVFHHIHSTLTLPLDPHVFSLV--LKSCTALRRPFLGASIHAHAAKSSFLSNP 85
S++ A + S L P ++V L + +ALR +G IH +A +S F S
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271
Query: 86 FIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDV 145
I++AL+++Y C SL +AR LFD + RN V WN+MI Y
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY------------------- 312
Query: 146 PPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIK 205
QN+ +A+ ++++ML+ +KP ++++ L AC ++ L +
Sbjct: 313 ---------------VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 206 EIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYAL 265
IH + + + + + LI Y +C + + ++F K++ + +V W+++I +A
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ--SRTLVSWNAMILGFAQ 415
Query: 266 HGEAKAALETFKEMEMAGVKPDGITFLGVLKA 297
+G AL F +M VKPD T++ V+ A
Sbjct: 416 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 128/288 (44%), Gaps = 43/288 (14%)
Query: 12 SRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGAS 71
S+L+ F+ + SRH L+ ++I + + H +L+L+ C++L+
Sbjct: 3 SQLVQFSTVPQIPNPPSRHRHFLSERNYIPANVY----EHPAALLLERCSSLKEL---RQ 55
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
I K+ F + L++L+ S+ A +F+ I + V+++ M+ +A D
Sbjct: 56 ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSD 115
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
+D KA+ + RM +++P + L
Sbjct: 116 -----------LD-----------------------KALQFFVRMRYDDVEPVVYNFTYL 141
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
L C + A L + KEIHG +++ +GL Y +C + +R VF +M + +
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE--R 199
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
D+V W+++++ Y+ +G A+ ALE K M +KP IT + VL A S
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 2 ASSSYYSATHSR-LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC 60
++S + SR L+ + +I R AL F + S P D + V+ +
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP-DTFTYVSVITAI 448
Query: 61 TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
L IH +S N F+ +AL+++Y C ++ AR +FD + R+ WN
Sbjct: 449 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWN 508
Query: 121 AMISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAA 158
AMI Y + AALELF M + PN TF +I+A
Sbjct: 509 AMIDGYG-THGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 154/335 (45%), Gaps = 46/335 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ LI+ VN +R A+ F + S + + + +L +C + G H
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSN-GVKANETIMVDLLVACGRCKDIVTGKWFHGFL 234
Query: 77 A--------KSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
+S N +A++LI++Y C L +AR+LFD +P R V WN++I+ Y+
Sbjct: 235 QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYS- 293
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
QN A +A+ ++ ML+L + P +T
Sbjct: 294 ---------------------------------QNGDAEEALCMFLDMLDLGIAPDKVTF 320
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
L+++ A + L + IH Y + V + L+ Y + G +++ F +
Sbjct: 321 LSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK 380
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGFADDA 307
KD + W+ +I A HG AL F+ M+ G PDGIT+LGVL ACSH G ++
Sbjct: 381 --KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEG 438
Query: 308 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
YF M+ +G+E + +HY C+VD+LSRAGR E
Sbjct: 439 QRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEE 473
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 139/314 (44%), Gaps = 50/314 (15%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A S + S + + +I + N D+AL + + P D F VLK+C+
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSP-DYFTFPYVLKACS 118
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
LR G+ +H K+ F N ++++ L+++Y C + +F++IP N V W +
Sbjct: 119 GLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGS 178
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
+IS + N + F+ AI +R M +
Sbjct: 179 LISGFV--------------------NNNRFS--------------DAIEAFREMQSNGV 204
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGY--GIRNDIVPHPQLG------SGLIEAYGRC 233
K ++ LL AC + K HG+ G+ D ++G + LI+ Y +C
Sbjct: 205 KANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKC 264
Query: 234 GCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 293
G L +R +F M ++ +V W+S+I+ Y+ +G+A+ AL F +M G+ PD +TFL
Sbjct: 265 GDLRTARYLFDGMP--ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 294 VLKA-----CSHAG 302
V++A CS G
Sbjct: 323 VIRASMIQGCSQLG 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 41/234 (17%)
Query: 71 SIHAHAAKSSFLSNPFIASALINLYGHC---LSLTSARHLFDEIPHRNEVVWNAMISLYA 127
+H KSS + N S LI+ C ++L+ AR +F+ I + +WN+MI Y+
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
+SP+ P+ KA+ Y+ ML P T
Sbjct: 84 NSPN---------------PD-------------------KALIFYQEMLRKGYSPDYFT 109
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
+L AC + + +HG+ ++ + + + L+ Y CG + VF
Sbjct: 110 FPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVF---E 166
Query: 248 DMDK-DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
D+ + +VV W SLIS + + A+E F+EM+ GVK + + +L AC
Sbjct: 167 DIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGR 220
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + +IT + ++AL +F + P D F V+++ LG SIH
Sbjct: 282 LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAP-DKVTFLSVIRASMIQGCSQLGQSIH 340
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN-AMISLYAHSPDS 132
A+ +K+ F+ + I AL+N+Y SA+ F+++ ++ + W +I L +H +
Sbjct: 341 AYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGN 400
Query: 133 LPAALELFHLMDVPPNES 150
AL +F M N +
Sbjct: 401 --EALSIFQRMQEKGNAT 416
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 166/329 (50%), Gaps = 6/329 (1%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + LI + ++A+ V+ + S P D + LV SC+ L G +
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV-SSCSMLGDLNRGKEFY 280
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ ++ + +AL++++ C + AR +FD + R V W MIS YA L
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC-GLL 339
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
+ +LF M+ + +N +I + Q A+AL++ M KP IT++ L
Sbjct: 340 DVSRKLFDDME-EKDVVLWNAMIGG-SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC + AL++ IH Y + + + LG+ L++ Y +CG + + +VF ++ ++
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT--RNS 455
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
+ ++++I ALHG+A A+ F EM AG+ PD ITF+G+L AC H G YF++
Sbjct: 456 LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQ 515
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M+ + + HYS +VD+L RAG L E
Sbjct: 516 MKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 12/297 (4%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D + ++ K C LR LG I H K + +A I+++ C + +AR +F
Sbjct: 155 DHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVF 214
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDG 165
DE P R+ V WN +I+ Y ++ A+ ++ LM+ V P++ T ++++ + D
Sbjct: 215 DESPVRDLVSWNCLINGYKKIGEA-EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGD- 272
Query: 166 AFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG 225
+ Y + E L+ + + AL+ ++ + I + IV + SG
Sbjct: 273 LNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISG 332
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
Y RCG L SR +F M +KDVV+W+++I + AL F+EM+ + K
Sbjct: 333 ----YARCGLLDVSRKLFDDME--EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 286 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
PD IT + L ACS G D + + R Y + + + LVD+ ++ G + E
Sbjct: 387 PDEITMIHCLSACSQLGALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 104/201 (51%), Gaps = 11/201 (5%)
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLE---LELKPRLITLLALLPACVNVAALNL 203
PN ++N I + +++ ++ LY++ML E +P T L C ++ +L
Sbjct: 116 PNIFSWNVTIRGFS-ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 204 IKEIHGY--GIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLIS 261
I G+ +R ++V H S I + CG + N+R VF + +D+V W+ LI+
Sbjct: 175 GHMILGHVLKLRLELVSHVHNAS--IHMFASCGDMENARKVFDE--SPVRDLVSWNCLIN 230
Query: 262 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 321
Y GEA+ A+ +K ME GVKPD +T +G++ +CS G + ++ ++ + G+
Sbjct: 231 GYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLR 289
Query: 322 ASSDHYSCLVDVLSRAGRLHE 342
+ + L+D+ S+ G +HE
Sbjct: 290 MTIPLVNALMDMFSKCGDIHE 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 41/310 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + +I V R AL +F + ++ T P D L +C+ L +G IH
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKP-DEITMIHCLSACSQLGALDVGIWIH 412
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ K S N + ++L+++Y C +++ A +F I RN +
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL---------------- 456
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
T+ II LA D A AI+ + M++ + P IT + LL
Sbjct: 457 -----------------TYTAIIGGLALHGD-ASTAISYFNEMIDAGIAPDEITFIGLLS 498
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLG--SGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
AC + + ++ +++ +PQL S +++ GR G L + + M M+
Sbjct: 499 ACCHGGMIQTGRDYFSQ-MKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM-PMEA 556
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 311
D VW +L+ +HG + + K++ GI L + A +DA
Sbjct: 557 DAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVL-LDGMYGEANMWEDAK-RA 614
Query: 312 TRMQRDYGVE 321
RM + GVE
Sbjct: 615 RRMMNERGVE 624
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 161/330 (48%), Gaps = 44/330 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I+ + R ++AL VF + + + L + V+ SC L LGAS+H +
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGS-DLSSEAIASVVASCAQLGSFDLGASVHGYV 372
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
+ + + ++LI +Y C L + +F+ + R+ V WNA+IS YA + D L A
Sbjct: 373 LRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVD-LCKA 431
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
L LF M FK + + T+++LL AC
Sbjct: 432 LLLFEEM----------------------KFKTVQ----------QVDSFTVVSLLQACS 459
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVF----WKMRDMDKD 252
+ AL + K IH IR+ I P + + L++ Y +CG L ++ F WK D
Sbjct: 460 SAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK------D 513
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
VV W LI+ Y HG+ ALE + E +G++P+ + FL VL +CSH G L F+
Sbjct: 514 VVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFS 573
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M RD+GVE + +H +C+VD+L RA R+ +
Sbjct: 574 SMVRDFGVEPNHEHLACVVDLLCRAKRIED 603
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 12 SRLLYFTKLITSHVNQ----SRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF 67
S +L TK SH+N H Q L+ F + + LP D F +LK+C +L+R
Sbjct: 5 SSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLP-DTFTFPSLLKACASLQRLS 63
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
G SIH + F S+ +I+S+L+NLY L AR +F+E+ R+ V W AMI Y+
Sbjct: 64 FGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYS 123
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
+ + A + N+ F+ I KP +T
Sbjct: 124 RA-----------------------GIVGEACSLVNEMRFQGI-----------KPGPVT 149
Query: 188 LLALLPACVNVAALNLIKEIHG-YGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
LL +L + + L + + YG DI + + ++ Y +C + +++++F +M
Sbjct: 150 LLEMLSGVLEITQLQCLHDFAVIYGFDCDIA----VMNSMLNLYCKCDHVGDAKDLFDQM 205
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITF 291
+D+V W+++IS YA G L+ M G++PD TF
Sbjct: 206 E--QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
FN I L++ D + ++ + ML +L P T +LL AC ++ L+ IH
Sbjct: 14 FNSHINHLSSHGDHK-QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 212 IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA 271
+ N + S L+ Y + G L ++R VF +MR ++DVV W+++I Y+ G
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR--ERDVVHWTAMIGCYSRAGIVGE 130
Query: 272 ALETFKEMEMAGVKPDGITFLGVLKA 297
A EM G+KP +T L +L
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEMLSG 156
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 36/234 (15%)
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
+H A F + + ++++NLY C + A+ LFD++ R+ V WN MIS YA S
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYA-SVG 224
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
++ L+L + M + DG L+P T A
Sbjct: 225 NMSEILKLLYRM------------------RGDG---------------LRPDQQTFGAS 251
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
L + L + + +H ++ L + LI Y +CG S V + + K
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN--K 309
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
DVV W+ +IS G A+ AL F EM +G V+ +C+ G D
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFD 363
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 162/340 (47%), Gaps = 43/340 (12%)
Query: 6 YYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
+ S L+ + +I+S+ A++V+ +H + + P F+ T+L
Sbjct: 346 FESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMH---IIGVKPDEFTFGSLLATSLDL 402
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
L + A K S I++ALI+ Y + A LF+ +N + WNA+IS
Sbjct: 403 DVL-EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELK--P 183
+ H N F+ + + +LE E++ P
Sbjct: 462 FYH----------------------------------NGFPFEGLERFSCLLESEVRILP 487
Query: 184 RLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVF 243
TL LL CV+ ++L L + H Y +R+ +G+ LI Y +CG + NS VF
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVF 547
Query: 244 WKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAG 302
+M + KDVV W+SLISAY+ HGE + A+ T+K M+ G V PD TF VL ACSHAG
Sbjct: 548 NQMSE--KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605
Query: 303 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ L F M +GV + DH+SCLVD+L RAG L E
Sbjct: 606 LVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDE 645
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 134/294 (45%), Gaps = 6/294 (2%)
Query: 12 SRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGAS 71
+ LL + +T + AL +F +H TL D + SL + + LR G
Sbjct: 19 TTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQ 78
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
+H +A +S L + +++ L++LY +L S + FDEI + W ++S D
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK-AIALYRRMLELELKPRLITLLA 190
+ A E+F M + + +N +I + G + ++ L+R M +L ++
Sbjct: 139 -IEYAFEVFDKMPERDDVAIWNAMIT--GCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
+L C + +L+ K++H I+ + + LI Y C +V++ VF +
Sbjct: 196 ILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV 254
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 304
+D V ++ +I A ++ L F++M A ++P +TF+ V+ +CS A
Sbjct: 255 RDQVTFNVVIDGLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSCSCAAMG 307
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 46/282 (16%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +IT H+ ++ +F +H L + D F+ +L C F G +H+
Sbjct: 158 WNAMITGCKESGYHETSVELFREMHK-LGVRHDKFGFATILSMCDYGSLDF-GKQVHSLV 215
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDE--IPHRNEVVWNAMISLYAHSPDSLP 134
K+ F + +ALI +Y +C + A +F+E + R++V
Sbjct: 216 IKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQV----------------- 258
Query: 135 AALELFHLMDVPPNESTFNPIIAALAA-QNDGAFKAIALYRRMLELELKPRLITLLALLP 193
TFN +I LA + D +++ ++R+MLE L+P +T ++++
Sbjct: 259 ----------------TFNVVIDGLAGFKRD---ESLLVFRKMLEASLRPTDLTFVSVMG 299
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
+C + AA+ ++HG I+ + + + + Y + VF + + KD+
Sbjct: 300 SC-SCAAMG--HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEE--KDL 354
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 295
V W+++IS+Y K+A+ +K M + GVKPD TF +L
Sbjct: 355 VTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL 396
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 146/296 (49%), Gaps = 40/296 (13%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D + V K+C L G +HA+A KS + + +++S ++++Y C +++A+ F
Sbjct: 516 DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 575
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPA--ALELFHLMDVPPNESTFNPIIAALAAQNDGA 166
D IP ++V W MIS + + A LM V P+E T
Sbjct: 576 DSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT--------------- 620
Query: 167 FKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGL 226
I LA +C+ AL ++IH ++ + P +G+ L
Sbjct: 621 -------------------IATLAKASSCLT--ALEQGRQIHANALKLNCTNDPFVGTSL 659
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
++ Y +CG + ++ +F ++ M+ + W++++ A HGE K L+ FK+M+ G+KP
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEMMN--ITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
D +TF+GVL ACSH+G +A + M DYG++ +HYSCL D L RAG + +
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQ 773
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 39/284 (13%)
Query: 52 VFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEI 111
S +LK C + S H +A K + F+A AL+N+Y + + LF+E+
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206
Query: 112 PHRNEVVWNAMISLYAHSPDSLPAALEL---FHLMDVPPNESTFNPI------------I 156
P+R+ V+WN M+ Y A++L FH + PNE T + +
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFK-EEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQV 265
Query: 157 AALAAQNDGAFKAIALYRR---------------------MLELELKPRLITLLALLPAC 195
+ A ND + + ++R M+E +++ +T + +L
Sbjct: 266 KSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATA 325
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
V V +L L +++H ++ + + + LI Y + +R VF M + +D++
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE--RDLIS 383
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
W+S+I+ A +G A+ F ++ G+KPD T VLKA S
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 39/299 (13%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + + + + L+ + +I +A+ +F + P D + + VLK+ +
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP-DQYTMTSVLKAAS 427
Query: 62 ALRRPF-LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
+L L +H HA K + +S+ F+++ALI+ Y + A LF E + + V WN
Sbjct: 428 SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWN 486
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE 180
AM++ Y S D L+LF LM S +D
Sbjct: 487 AMMAGYTQSHDG-HKTLKLFALMHKQGERS------------DD---------------- 517
Query: 181 LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
TL + C + A+N K++H Y I++ + SG+++ Y +CG + ++
Sbjct: 518 -----FTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 241 NVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
F + D V W+++IS +GE + A F +M + GV PD T + KA S
Sbjct: 573 FAFDSIPVPDD--VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 45/261 (17%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I+ + ++A VF + LP D + + K+ + L G IHA+A
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLP-DEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K + ++PF+ ++L+++Y C S+ A LF I N WNAM
Sbjct: 645 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM-------------- 690
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
+ LA +G + + L+++M L +KP +T + +L AC
Sbjct: 691 -------------------LVGLAQHGEGK-ETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Query: 197 NVA----ALNLIKEIHG-YGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
+ A ++ +HG YGI+ P + S L +A GR G + + N+ M M+
Sbjct: 731 HSGLVSEAYKHMRSMHGDYGIK----PEIEHYSCLADALGRAGLVKQAENLIESM-SMEA 785
Query: 252 DVVVWSSLISAYALHGEAKAA 272
++ +L++A + G+ +
Sbjct: 786 SASMYRTLLAACRVQGDTETG 806
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 75 HAAKSSFLSNP--FIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
HA +F NP F+ + LI++Y C SLT AR +FD++P R+ V WN++++ YA S +
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
+ ++ +A L+R + + + +TL +L
Sbjct: 122 VVENIQ-----------------------------QAFLLFRILRQDVVYTSRMTLSPML 152
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
C++ + + HGY + + + L+ Y + G + + +F +M +D
Sbjct: 153 KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP--YRD 210
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITF 291
VV+W+ ++ AY G + A++ +G+ P+ IT
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 218 PHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEA-----KAA 272
P L + LI Y +CG L +R VF KM D+D+V W+S+++AYA E + A
Sbjct: 72 PERFLINNLISMYSKCGSLTYARRVFDKMP--DRDLVSWNSILAAYAQSSECVVENIQQA 129
Query: 273 LETFKEMEMAGVKPDGITFLGVLKACSHAGF 303
F+ + V +T +LK C H+G+
Sbjct: 130 FLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 156/324 (48%), Gaps = 39/324 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I+ + + +AL +F + T P D V+ +C LG +H
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRP-DESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
F SN I +ALI+LY C L +A LF+ +P+++ + WN +I Y H
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH-------- 344
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
+ L+ +A+ L++ ML P +T+L++LPAC
Sbjct: 345 MNLYK--------------------------EALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 197 NVAALNLIKEIHGYGIR--NDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
++ A+++ + IH Y + + L + LI+ Y +CG + + VF + + K +
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI--LHKSLS 436
Query: 255 VWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 314
W+++I +A+HG A A+ + F M G++PD ITF+G+L ACSH+G D F M
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Query: 315 QRDYGVEASSDHYSCLVDVLSRAG 338
+DY + +HY C++D+L +G
Sbjct: 497 TQDYKMTPKLEHYGCMIDLLGHSG 520
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 142/313 (45%), Gaps = 21/313 (6%)
Query: 37 FHHIHSTLTLPLDP---HVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALIN 93
FH + S+ P D H +L +C L+ + IHA K + + S LI
Sbjct: 17 FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIE 73
Query: 94 ---LYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLM---DVPP 147
L H L A +F I N ++WN M +A S D + +AL+L+ M + P
Sbjct: 74 FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPV-SALKLYVCMISLGLLP 132
Query: 148 NESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEI 207
N TF P + A++ + ++ +L+L L +L+ V L ++
Sbjct: 133 NSYTF-PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 208 HGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHG 267
D+V + + LI+ Y G + N++ +F ++ KDVV W+++IS YA G
Sbjct: 192 FDKSPHRDVVSY----TALIKGYASRGYIENAQKLFDEIPV--KDVVSWNAMISGYAETG 245
Query: 268 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 327
K ALE FK+M V+PD T + V+ AC+ +G + + D+G ++
Sbjct: 246 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID-DHGFGSNLKIV 304
Query: 328 SCLVDVLSRAGRL 340
+ L+D+ S+ G L
Sbjct: 305 NALIDLYSKCGEL 317
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 164/329 (49%), Gaps = 45/329 (13%)
Query: 21 ITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVF---SLVLKSCTALRRPFLGASIHAHAA 77
I S+ N ++ A +++ I S+ + + P+ F SL S + G ++HAH
Sbjct: 81 IVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVL 140
Query: 78 KSSFLS----NPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
K FL + F+ +AL+ Y +C L AR LF+ I + WN +++ YA+S +
Sbjct: 141 K--FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEI- 197
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
D + + L+ RM +++P ++L+AL+
Sbjct: 198 ------------------------------DSDEEVLLLFMRM---QVRPNELSLVALIK 224
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
+C N+ H Y ++N++ + +G+ LI+ Y +CGCL +R VF +M +DV
Sbjct: 225 SCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ--RDV 282
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
++++I A+HG + +E +K + G+ PD TF+ + ACSH+G D+ L F
Sbjct: 283 SCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNS 342
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M+ YG+E +HY CLVD+L R+GRL E
Sbjct: 343 MKAVYGIEPKVEHYGCLVDLLGRSGRLEE 371
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 170/346 (49%), Gaps = 10/346 (2%)
Query: 1 MASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC 60
+A + H + F +I + Q +AL ++ + S P + V SL++ C
Sbjct: 184 VAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLV-CC 242
Query: 61 TALRRPFLGASIHAHAAKSS--FLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVV 118
L LG +H + + SN +++AL+++Y C A+ FD + ++
Sbjct: 243 GHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRS 302
Query: 119 WNAMISLYAHSPDSLPAALELFHLMDVPPNE-STFNPIIAALAAQNDGAFKAIALYRRML 177
WN M+ + D + AA +F M P + ++N ++ + + L+ M
Sbjct: 303 WNTMVVGFVRLGD-MEAAQAVFDQM--PKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMT 359
Query: 178 ELE-LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL 236
+E +KP +T+++L+ N L+ + +HG IR + L S LI+ Y +CG +
Sbjct: 360 IVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 237 VNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 296
+ VF +KDV +W+S+I+ A HG + AL+ F M+ GV P+ +T L VL
Sbjct: 420 ERAFMVF--KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLT 477
Query: 297 ACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
ACSH+G ++ L F M+ +G + ++HY LVD+L RAGR+ E
Sbjct: 478 ACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEE 523
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 167/331 (50%), Gaps = 44/331 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGAS-I 72
++ +T +I+ + ++A+ +F + P + +S++L TAL P + S +
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP-NEFTYSVIL---TAL--PVISPSEV 415
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
HA K+++ + + +AL++ Y + A +F I ++ V W+AM++ YA + ++
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 475
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
A I ++ + + +KP T ++L
Sbjct: 476 EAA----------------------------------IKMFGELTKGGIKPNEFTFSSIL 501
Query: 193 PACVNV-AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
C A++ K+ HG+ I++ + + S L+ Y + G + ++ VF + R+ K
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE--K 559
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 311
D+V W+S+IS YA HG+A AL+ FKEM+ VK DG+TF+GV AC+HAG ++ YF
Sbjct: 560 DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYF 619
Query: 312 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M RD + + +H SC+VD+ SRAG+L +
Sbjct: 620 DIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 42/287 (14%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + +I+ + +AL +F+ + + L F+ V+K C L+ +H
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSMRLNY-VRLSESSFASVIKLCANLKELRFTEQLH 318
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVV-WNAMISLYAHSPDS 132
K FL + I +AL+ Y C ++ A LF EI VV W AMIS +
Sbjct: 319 CSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL----- 373
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
QNDG +A+ L+ M ++P T +L
Sbjct: 374 -----------------------------QNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
A ++ E+H ++ + +G+ L++AY + G + + VF + D KD
Sbjct: 405 TALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD--KD 458
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
+V WS++++ YA GE +AA++ F E+ G+KP+ TF +L C+
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 118/287 (41%), Gaps = 43/287 (14%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ L+ R +A +F +IH L + +D +FS VLK L G +H
Sbjct: 61 YISLLFGFSRDGRTQEAKRLFLNIHR-LGMEMDCSIFSSVLKVSATLCDELFGRQLHCQC 119
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K FL + + ++L++ Y + R +FDE+ RN V W +IS YA + +
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMN-DEV 178
Query: 137 LELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
L LF M PN TF + LA + G R L
Sbjct: 179 LTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG--------RGL---------------- 214
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
++H ++N + + + LI Y +CG + +R +F K K V
Sbjct: 215 ------------QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE--VKSV 260
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
V W+S+IS YA +G AL F M + V+ +F V+K C++
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 131/287 (45%), Gaps = 42/287 (14%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T LI+ + S +D+ LT+F + + T P + F+ L G +H
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQP-NSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
K+ ++++LINLY C ++ AR LFD+ ++ V WN+MIS YA + L
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 134 PAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
A L +F+ M V +ES+F +I
Sbjct: 278 EA-LGMFYSMRLNYVRLSESSFASVI---------------------------------- 302
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
C N+ L +++H ++ + + + L+ AY +C ++++ +F ++ +
Sbjct: 303 --KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 297
+VV W+++IS + + + A++ F EM+ GV+P+ T+ +L A
Sbjct: 361 -NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 205 KEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYA 264
+++H I+ + +G+ L++ Y + + R VF +M++ ++VV W++LIS YA
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE--RNVVTWTTLISGYA 170
Query: 265 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 308
+ L F M+ G +P+ TF L + G L
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 37/337 (10%)
Query: 6 YYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
+Y + + +T L++ + R DQAL + P D + VL C LR
Sbjct: 375 FYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRP-DVVTIATVLPVCAELRA 433
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
G IH +A K+ FL N + ++L+ +Y C LFD + RN W AMI
Sbjct: 434 IKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDC 493
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
Y + D L A +E+F LM + + +P
Sbjct: 494 YVENCD-LRAGIEVFRLMLLSKH---------------------------------RPDS 519
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
+T+ +L C ++ AL L KE+HG+ ++ + P + + +I+ YG+CG L ++ F
Sbjct: 520 VTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDA 579
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
+ K + W+++I AY + + A+ F++M G P+ TF VL CS AGF D
Sbjct: 580 V--AVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVD 637
Query: 306 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+A +F M R Y ++ S +HYS ++++L+R GR+ E
Sbjct: 638 EAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEE 674
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 150/308 (48%), Gaps = 51/308 (16%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHV--NQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VL 57
A + +T S + + L+ V + R+ L+ F + L +D +V+SL V
Sbjct: 165 AQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE---LGVDLNVYSLSNVF 221
Query: 58 KS---CTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR 114
KS +ALR+ G HA A K+ ++ F+ ++L+++Y C + AR +FDEI R
Sbjct: 222 KSFAGASALRQ---GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER 278
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYR 174
+ VVW AMI+ AH N ++A+ L+R
Sbjct: 279 DIVVWGAMIAGLAH----------------------------------NKRQWEALGLFR 304
Query: 175 RML-ELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRN-DIVPHPQLGSGLIEAYGR 232
M+ E ++ P + L +LP +V AL L KE+H + +++ + V P + SGLI+ Y +
Sbjct: 305 TMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCK 364
Query: 233 CGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 292
CG + + R VF+ + ++ + W++L+S YA +G AL + M+ G +PD +T
Sbjct: 365 CGDMASGRRVFYGSKQ--RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIA 422
Query: 293 GVLKACSH 300
VL C+
Sbjct: 423 TVLPVCAE 430
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 117/270 (43%), Gaps = 36/270 (13%)
Query: 27 QSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPF 86
Q+ + ALT+ ++ +P++ FS +L++C + G +H H + SN F
Sbjct: 89 QNNLEVALTILDYLEQR-GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 87 IASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVP 146
+ + L+++Y C S+ A+ +FDE N WNA++
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLR---------------------- 185
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKE 206
+I+ D ++ + M EL + + +L + + +AL +
Sbjct: 186 ------GTVISGKKRYQD----VLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLK 235
Query: 207 IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALH 266
H I+N + L + L++ Y +CG + +R VF ++ +++D+VVW ++I+ A +
Sbjct: 236 THALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI--VERDIVVWGAMIAGLAHN 293
Query: 267 GEAKAALETFKEM-EMAGVKPDGITFLGVL 295
AL F+ M + P+ + +L
Sbjct: 294 KRQWEALGLFRTMISEEKIYPNSVILTTIL 323
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 45/333 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T L + + RH +A+ +F + P D + VL +C + G I
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP-DSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ + N F+ + L+NLY C + AR +FD + ++ V W+ MI YA +S
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYA--SNSF 293
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
P + I L+ +ML+ LKP +++ L
Sbjct: 294 PK--------------------------------EGIELFLQMLQENLKPDQFSIVGFLS 321
Query: 194 ACVNVAALNLIKEIHGYGI----RNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
+C ++ AL+L + +GI R++ + + + + LI+ Y +CG + VF +M++
Sbjct: 322 SCASLGALDLGE----WGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE- 376
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
KD+V+ ++ IS A +G K + F + E G+ PDG TFLG+L C HAG D L
Sbjct: 377 -KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLR 435
Query: 310 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+F + Y ++ + +HY C+VD+ RAG L +
Sbjct: 436 FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDD 468
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 138/304 (45%), Gaps = 40/304 (13%)
Query: 5 SYYSATHSR---LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
SY +H++ + + LI VN + L +F I L L F LVLK+CT
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKH-GLYLHGFTFPLVLKACT 122
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
LG +H+ K F + ++L+++Y L A LFDEIP R+ V W A
Sbjct: 123 RASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
+ S Y S +AI L+++M+E+ +
Sbjct: 183 LFSGYTTSGRHR----------------------------------EAIDLFKKMVEMGV 208
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
KP ++ +L ACV+V L+ + I Y ++ + + + L+ Y +CG + +R+
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
VF M ++KD+V WS++I YA + K +E F +M +KPD + +G L +C+
Sbjct: 269 VFDSM--VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASL 326
Query: 302 GFAD 305
G D
Sbjct: 327 GALD 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
+L AC ++ L ++H ++ + L+ Y G L ++ +F ++ D
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD-- 174
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 310
+ VV W++L S Y G + A++ FK+M GVKPD + VL AC H G D +
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE-W 233
Query: 311 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ + ++ +S + LV++ ++ G++ +
Sbjct: 234 IVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 148/299 (49%), Gaps = 37/299 (12%)
Query: 42 STLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSL 101
S+++ P D F+ LKSC ++ IH +S FL + +A++L+ Y S+
Sbjct: 100 SSVSRP-DLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSV 158
Query: 102 TSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAA 161
A +FDE+P R+ V WN MI ++H +
Sbjct: 159 EIASKVFDEMPVRDLVSWNVMICCFSH------------------------------VGL 188
Query: 162 QNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQ 221
N +A+++Y+RM + TL+ALL +C +V+ALN+ +H
Sbjct: 189 HN----QALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVF 244
Query: 222 LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM 281
+ + LI+ Y +CG L N+ VF MR +DV+ W+S+I Y +HG A+ F++M
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRK--RDVLTWNSMIIGYGVHGHGVEAISFFRKMVA 302
Query: 282 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
+GV+P+ ITFLG+L CSH G + + +F M + + + HY C+VD+ RAG+L
Sbjct: 303 SGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQL 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 113/258 (43%), Gaps = 46/258 (17%)
Query: 30 HDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIAS 89
H+QAL+++ + + D + +L SC + +G +H A S F+++
Sbjct: 189 HNQALSMYKRMGNEGVCG-DSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSN 247
Query: 90 ALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNE 149
ALI++Y C SL +A +F+ + R+ + WN+MI Y
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYG---------------------- 285
Query: 150 STFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKE-IH 208
+ +AI+ +R+M+ ++P IT L LL C + L+KE +
Sbjct: 286 ------------VHGHGVEAISFFRKMVASGVRPNAITFLGLLLGC---SHQGLVKEGVE 330
Query: 209 GYGIRND---IVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYAL 265
+ I + + P+ + +++ YGR G L NS + + +D V+W +L+ + +
Sbjct: 331 HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYA-SSCHEDPVLWRTLLGSCKI 389
Query: 266 HGE---AKAALETFKEME 280
H + A++ ++E
Sbjct: 390 HRNLELGEVAMKKLVQLE 407
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 154/312 (49%), Gaps = 37/312 (11%)
Query: 31 DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASA 90
++A+ +F + +P + S +L C + LG +H K F + ++++A
Sbjct: 330 NEAVDLFIRMREAFVVP-NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 91 LINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNES 150
LI++Y C + +A LF E+ + NE
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSK---------------------------------NEV 415
Query: 151 TFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGY 210
++N +I +G KA +++R L ++ +T + L AC ++A+++L ++HG
Sbjct: 416 SWNTVIVGYENLGEGG-KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGL 474
Query: 211 GIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAK 270
I+ + + + LI+ Y +CG + +++VF +M +D V W++LIS Y+ HG +
Sbjct: 475 AIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETID--VASWNALISGYSTHGLGR 532
Query: 271 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 330
AL M+ KP+G+TFLGVL CS+AG D F M RD+G+E +HY+C+
Sbjct: 533 QALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCM 592
Query: 331 VDVLSRAGRLHE 342
V +L R+G+L +
Sbjct: 593 VRLLGRSGQLDK 604
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 42/255 (16%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
L+PHVF+ LK +L + + +H+ K + SN F+ +ALIN Y C S+ SAR +
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 108 FDEIPHRNEVVWNAMISLYAHS---PDSLPAALELFHLMDVPPNESTFNPIIAALAAQND 164
F+ I ++ VVW ++S Y + DSL L + PN TF+
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLK-LLSCMRMAGFMPNNYTFD----------- 251
Query: 165 GAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGS 224
L A + + A + K +HG ++ V P++G
Sbjct: 252 -------------------------TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 225 GLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGV 284
GL++ Y + G + ++ VF +M DVV WS +I+ + +G A++ F M A V
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMP--KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFV 344
Query: 285 KPDGITFLGVLKACS 299
P+ T +L C+
Sbjct: 345 VPNEFTLSSILNGCA 359
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 105/260 (40%), Gaps = 44/260 (16%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
LD H + +L+ C P +IH K + F + L+N Y A +L
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
FDE+P RN V +F + A Q+
Sbjct: 107 FDEMPERNNV---------------------------------SFVTLAQGYACQD---- 129
Query: 168 KAIALYRRMLEL--ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG 225
I LY R+ EL P + T + L V++ + +H ++ + +G+
Sbjct: 130 -PIGLYSRLHREGHELNPHVFT--SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
LI AY CG + ++R VF + + KD+VVW+ ++S Y +G + +L+ M MAG
Sbjct: 187 LINAYSVCGSVDSARTVFEGI--LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM 244
Query: 286 PDGITFLGVLKACSHAGFAD 305
P+ TF LKA G D
Sbjct: 245 PNNYTFDTALKASIGLGAFD 264
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 115/286 (40%), Gaps = 37/286 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + +++ +V + +L + + +P + + F LK+ L +H
Sbjct: 212 IVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP-NNYTFDTALKASIGLGAFDFAKGVH 270
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
K+ ++ +P + L+ LY ++ A +F+E+P + V W+ MI+ +
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC------ 324
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
QN +A+ L+ RM E + P TL ++L
Sbjct: 325 ----------------------------QNGFCNEAVDLFIRMREAFVVPNEFTLSSILN 356
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
C L +++HG ++ + + LI+ Y +C + + +F ++ K+
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS--SKNE 414
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
V W+++I Y GE A F+E V +TF L AC+
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 172/390 (44%), Gaps = 74/390 (18%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
LI +H S+ QA VF + L D + +LK+C+ + +H H K
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQR-FGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKL 146
Query: 80 SFLSNPFIASALINLYGHCLSL---------------------------------TSARH 106
S+ ++ +ALI+ Y C L AR
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 107 LFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLM----------------------- 143
LFDE+P R+ + WN M+ YA + + A ELF M
Sbjct: 207 LFDEMPQRDLISWNTMLDGYARCRE-MSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 144 -----DVPP----NESTFNPIIAALAAQNDGAFK-AIALYRRMLELELKPRLITLLALLP 193
D P N T+ IIA A + G K A L +M+ LK ++++L
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEK--GLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM-DKD 252
AC L+L IH R+++ + + + L++ Y +CG L + +VF D+ KD
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF---NDIPKKD 380
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
+V W++++ +HG K A+E F M G++PD +TF+ VL +C+HAG D+ + YF
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M++ Y + +HY CLVD+L R GRL E
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKE 470
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 36/235 (15%)
Query: 46 LPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSAR 105
L D +L +CT LG IH+ +S+ SN ++ +AL+++Y C +L A
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG 165
+F++IP ++ V WN M+ L G
Sbjct: 371 DVFNDIPKKDLVSWNTMLH---------------------------------GLGVHGHG 397
Query: 166 AFKAIALYRRMLELELKPRLITLLALLPACVNVAALNL-IKEIHGYGIRNDIVPHPQLGS 224
+AI L+ RM ++P +T +A+L +C + ++ I + D+VP +
Sbjct: 398 K-EAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYG 456
Query: 225 GLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM 279
L++ GR G L + V M M+ +VV+W +L+ A +H E A E +
Sbjct: 457 CLVDLLGRVGRLKEAIKVVQTM-PMEPNVVIWGALLGACRMHNEVDIAKEVLDNL 510
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 24/202 (11%)
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKE 206
PN N +I A AQN ++A ++ M L T LL AC + L ++K
Sbjct: 80 PNVHLCNSLIRA-HAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKM 138
Query: 207 IHGY----GIRNDI-VPHPQLGSGLIEAYGRCGCL--VNSRNVFWKMRDMDKDVVVWSSL 259
+H + G+ +DI VP+ LI+ Y RCG L ++ +F KM ++D V W+S+
Sbjct: 139 MHNHIEKLGLSSDIYVPN-----ALIDCYSRCGGLGVRDAMKLFEKMS--ERDTVSWNSM 191
Query: 260 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 319
+ GE + A F EM + D I++ +L + A F +M
Sbjct: 192 LGGLVKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEKMP---- 243
Query: 320 VEASSDHYSCLVDVLSRAGRLH 341
E ++ +S +V S+AG +
Sbjct: 244 -ERNTVSWSTMVMGYSKAGDME 264
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 159/328 (48%), Gaps = 39/328 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +++ + N +++A++ F + P D S++L SC LR G IH
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKP-DKTTLSVILSSCARLRFLEGGKQIHGVV 442
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEV-VWNAMISLYAHSPDSLPA 135
++ N I S LI +Y C + + +FD+ + ++ WN+MIS + H
Sbjct: 443 IRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRH------- 495
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE-LKPRLITLLALLPA 194
+++D KA+ L+RRM + L P + +L +
Sbjct: 496 -----NMLDT----------------------KALILFRRMHQTAVLCPNETSFATVLSS 528
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
C + +L ++ HG +++ V + + L + Y +CG + ++R F + + K+ V
Sbjct: 529 CSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV--LRKNTV 586
Query: 255 VWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 314
+W+ +I Y +G A+ +++M +G KPDGITF+ VL ACSH+G + L + M
Sbjct: 587 IWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 646
Query: 315 QRDYGVEASSDHYSCLVDVLSRAGRLHE 342
QR +G+E DHY C+VD L RAGRL +
Sbjct: 647 QRIHGIEPELDHYICIVDCLGRAGRLED 674
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 58 KSCTALRRPF---LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR 114
+ C +L + LG IH A + F + + ++L+ +Y + A +F E+P
Sbjct: 254 EGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEV 313
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMD--VPPNESTFNPIIAALAAQND-------- 164
N V WN MI + S + L + D PNE T ++ A D
Sbjct: 314 NVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIF 373
Query: 165 --------GAF--------------KAIALYRRMLELELKPRLITLLALLPACVNVAALN 202
A+ +AI+ +R+M LKP TL +L +C + L
Sbjct: 374 SSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLE 433
Query: 203 LIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISA 262
K+IHG IR +I + + SGLI Y C + S +F + + D+ W+S+IS
Sbjct: 434 GGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCIN-ELDIACWNSMISG 492
Query: 263 YALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSH 300
+ + AL F+ M + A + P+ +F VL +CS
Sbjct: 493 FRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 8/234 (3%)
Query: 64 RRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMI 123
R G IH + S+ ++ + L++LY C AR +FDE+ R+ WNA +
Sbjct: 20 RCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFL 79
Query: 124 SLYAHSPDSLPAALELFHLMDVPPNE-STFNPIIAALAAQNDGAFKAIALYRRMLELELK 182
+ D L A E+F M P + ++N +I+ L + KA+ +Y+RM+
Sbjct: 80 TFRCKVGD-LGEACEVFDGM--PERDVVSWNNMISVLVRKGFEE-KALVVYKRMVCDGFL 135
Query: 183 PRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVN-SRN 241
P TL ++L AC V HG ++ + + +G+ L+ Y +CG +V+
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 295
VF + ++ V ++++I A + A++ F+ M GV+ D + +L
Sbjct: 196 VFESLSQPNE--VSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 167/330 (50%), Gaps = 7/330 (2%)
Query: 13 RLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASI 72
+L+ + +I+ +VN+ + +AL + + S+ + LD + V+++C LG +
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSS-GIELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
HA+ + S F ++L++LY C AR +F+++P ++ V WNA++S Y S
Sbjct: 309 HAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
A L +F M N ++ +I+ LA +N + + L+ M +P +
Sbjct: 368 GEAKL-IFKEMK-EKNILSWMIMISGLA-ENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
+C + A ++ H ++ G+ LI Y +CG + +R VF M +D
Sbjct: 425 KSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS- 483
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
V W++LI+A HG A++ ++EM G++PD IT L VL ACSHAG D YF
Sbjct: 484 -VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFD 542
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M+ Y + +DHY+ L+D+L R+G+ +
Sbjct: 543 SMETVYRIPPGADHYARLIDLLCRSGKFSD 572
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 120/285 (42%), Gaps = 40/285 (14%)
Query: 57 LKSCTALRRPFL--GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR 114
L+ C LRR L ++H + F I + LI++Y L AR LFDEI
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNEST-FNPIIAALAAQNDGAFKAIALY 173
+++ M+S Y S D + A +F V ++ +N +I + NDG + AI L+
Sbjct: 79 DKIARTTMVSGYCASGD-ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDG-YSAINLF 136
Query: 174 RRMLELELKPRLITLLALLPACVNVA-ALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGR 232
+M KP T ++L VA + H +++ + + L+ Y +
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK 196
Query: 233 CGC----LVNSRNVFWKMRDMDK------------------------------DVVVWSS 258
C L ++R VF ++ + D+ +V +++
Sbjct: 197 CASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNA 256
Query: 259 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGF 303
+IS Y G + ALE + M +G++ D T+ V++AC+ AG
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 167/329 (50%), Gaps = 42/329 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T +I+++ H +AL + + P + + +S VL+SC + + +H
Sbjct: 127 VISWTTMISAYSKCKIHQKALELLVLMLRDNVRP-NVYTYSSVLRSCNGMSDVRM---LH 182
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
K S+ F+ SALI+++ A +FDE+ + +VWN++I +A
Sbjct: 183 CGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA------ 236
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
QN + A+ L++RM TL ++L
Sbjct: 237 ----------------------------QNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC +A L L + H + ++ D L + L++ Y +CG L ++ VF +M++ +DV
Sbjct: 269 ACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKE--RDV 324
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
+ WS++IS A +G ++ AL+ F+ M+ +G KP+ IT +GVL ACSHAG +D YF
Sbjct: 325 ITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS 384
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M++ YG++ +HY C++D+L +AG+L +
Sbjct: 385 MKKLYGIDPVREHYGCMIDLLGKAGKLDD 413
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 7 YSATHSRLLY--FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALR 64
YS+T LL FT+L Q +A+ + S L D +S ++K C + R
Sbjct: 21 YSSTDQTLLLSEFTRLCY----QRDLPRAMKAMDSLQSH-GLWADSATYSELIKCCISNR 75
Query: 65 RPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMIS 124
G I H + F+ + LIN+Y L A LFD++P RN + W MIS
Sbjct: 76 AVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMIS 135
Query: 125 LYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
Y+ ALEL LM +V PN T++ ++ + +D
Sbjct: 136 AYSKCKIH-QKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD----------------- 177
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
V + +IKE G+ +D+ + S LI+ + + G ++ +
Sbjct: 178 --------------VRMLHCGIIKE----GLESDVF----VRSALIDVFAKLGEPEDALS 215
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
VF +M + D +VW+S+I +A + + ALE FK M+ AG + T VL+AC+
Sbjct: 216 VFDEM--VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 139/270 (51%), Gaps = 36/270 (13%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G +IH +A + FL + + +ALI++YG C L SA +FD + +N + WN++I+ Y
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV- 407
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
QN + A+ L++ + + L P T+
Sbjct: 408 ---------------------------------QNGKNYSALELFQELWDSSLVPDSTTI 434
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
++LPA +L+ +EIH Y +++ + + + L+ Y CG L ++R F +
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI-- 492
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 308
+ KDVV W+S+I AYA+HG + ++ F EM + V P+ TF +L ACS +G D+
Sbjct: 493 LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGW 552
Query: 309 CYFTRMQRDYGVEASSDHYSCLVDVLSRAG 338
YF M+R+YG++ +HY C++D++ R G
Sbjct: 553 EYFESMKREYGIDPGIEHYGCMLDLIGRTG 582
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 38/251 (15%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D + V+KS + G IHA K F+S+ ++ ++LI+LY A +F
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
+E+P R+ V WN+MIS Y A DG F
Sbjct: 189 EEMPERDIVSWNSMISGYL---------------------------------ALGDG-FS 214
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI-VPHPQLGSGLI 227
++ L++ ML+ KP + ++ L AC +V + + KEIH + +R+ I + + ++
Sbjct: 215 SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSIL 274
Query: 228 EAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKP 286
+ Y + G + + +F M + +++V W+ +I YA +G A F++M E G++P
Sbjct: 275 DMYSKYGEVSYAERIFNGM--IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQP 332
Query: 287 DGITFLGVLKA 297
D IT + +L A
Sbjct: 333 DVITSINLLPA 343
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF-KAIALYRRMLELELKPRLITLLAL 191
+ AL+LF M+ + +N +I + G + +A+ Y RM+ +K T +
Sbjct: 80 MEDALQLFDEMN-KADAFLWNVMIKGFTSC--GLYIEAVQFYSRMVFAGVKADTFTYPFV 136
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
+ + +++L K+IH I+ V + + LI Y + GC ++ VF +M + +
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE--R 194
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
D+V W+S+IS Y G+ ++L FKEM G KPD + + L ACSH
Sbjct: 195 DIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 161/332 (48%), Gaps = 47/332 (14%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ ++ S++ A+ V+ + + LP D + +V+K+ + LG +H+ A
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLP-DRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
+ F+ + F S I LY +AR +FDE P R WNA+I H+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR----- 198
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
A +A+ ++ M L+P T++++ +C
Sbjct: 199 -----------------------------ANEAVEMFVDMKRSGLEPDDFTMVSVTASCG 229
Query: 197 NVAALNLIKEIHGYGI------RNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
+ L+L ++H + ++DI+ + + LI+ YG+CG + + ++F +MR
Sbjct: 230 GLGDLSLAFQLHKCVLQAKTEEKSDIM----MLNSLIDMYGKCGRMDLASHIFEEMR--Q 283
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 310
++VV WSS+I YA +G ALE F++M GV+P+ ITF+GVL AC H G ++ Y
Sbjct: 284 RNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTY 343
Query: 311 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
F M+ ++ +E HY C+VD+LSR G+L E
Sbjct: 344 FAMMKSEFELEPGLSHYGCIVDLLSRDGQLKE 375
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 162/330 (49%), Gaps = 41/330 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPFLGAS 71
++ ++ +I +V +AL VF+ + T +P+V ++ VL++C A G
Sbjct: 229 VISWSTVIACYVQNGAAAEALLVFNDMMDDGT---EPNVATVLCVLQACAAAHDLEQGRK 285
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
H A + + +++AL+++Y C S A +F IP ++ V W A+IS + +
Sbjct: 286 THELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGM 345
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
+ ++E F +M +LE +P I ++ +
Sbjct: 346 A-HRSIEEFSIM--------------------------------LLENNTRPDAILMVKV 372
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
L +C + L K H Y I+ +P +G+ L+E Y RCG L N+ VF + K
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI--ALK 430
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCY 310
D VVW+SLI+ Y +HG+ ALETF M + + VKP+ +TFL +L ACSHAG + L
Sbjct: 431 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Query: 311 FTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
F M DY + + +HY+ LVD+L R G L
Sbjct: 491 FKLMVNDYRLAPNLEHYAVLVDLLGRVGDL 520
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 39/302 (12%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + T L + L+ S + + ++ L F H+ P D + LK+C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKP-DNFTLPVALKACG 71
Query: 62 ALRRPFLGASIHAHAAKSSFL-SNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
LR G IH K L S+ ++ S+LI +Y C + A +FDE+ + V W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRM-LEL 179
+M+S + +N ++A+ +RRM +
Sbjct: 132 SMVSGFE----------------------------------KNGSPYQAVEFFRRMVMAS 157
Query: 180 ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNS 239
++ P +TL+ L+ AC ++ L + +HG+ IR L + L+ Y + +
Sbjct: 158 DVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEA 217
Query: 240 RNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
N+F + +KDV+ WS++I+ Y +G A AL F +M G +P+ T L VL+AC+
Sbjct: 218 VNLFKMI--AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACA 275
Query: 300 HA 301
A
Sbjct: 276 AA 277
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 138/310 (44%), Gaps = 38/310 (12%)
Query: 32 QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASAL 91
QA+ F + + D ++ +CT L LG +H + F ++ + ++L
Sbjct: 145 QAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSL 204
Query: 92 INLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNEST 151
+N Y + A +LF I ++ + W+ +I+ Y
Sbjct: 205 LNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV------------------------ 240
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
QN A +A+ ++ M++ +P + T+L +L AC L ++ H
Sbjct: 241 ----------QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELA 290
Query: 212 IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA 271
IR + ++ + L++ Y +C + VF ++ KDVV W +LIS + L+G A
Sbjct: 291 IRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP--RKDVVSWVALISGFTLNGMAHR 348
Query: 272 ALETFKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 330
++E F M + +PD I + VL +CS GF + A C+ + + + YG +++ + L
Sbjct: 349 SIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASL 407
Query: 331 VDVLSRAGRL 340
V++ SR G L
Sbjct: 408 VELYSRCGSL 417
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRN 115
VL SC+ L H++ K F SNPFI ++L+ LY C SL +A +F+ I ++
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431
Query: 116 EVVWNAMISLYA-HSPDSLPAALELFHLM----DVPPNESTFNPIIAALAAQNDGAFKAI 170
VVW ++I+ Y H + ALE F+ M +V PNE TF I++A + + +
Sbjct: 432 TVVWTSLITGYGIHGKGT--KALETFNHMVKSSEVKPNEVTFLSILSA-CSHAGLIHEGL 488
Query: 171 ALYRRML-ELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEA 229
+++ M+ + L P L L+ V L+ EI R P PQ+ L+
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK---RMPFSPTPQILGTLL-- 543
Query: 230 YGRCGCLVN---SRNVFWKMRDMDKDVVVWSSLIS-AYALHGEAKAALETFKEMEMAGVK 285
G C N + V K+ +++ + + L+S Y + GE + + ++ G+K
Sbjct: 544 -GACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIK 602
Query: 286 PDGITFLGVLKACSHAGFADDAL 308
L ++ H ADD L
Sbjct: 603 KGLAESLIEIRRKVHRFVADDEL 625
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 168/330 (50%), Gaps = 8/330 (2%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L F LI + +A + + + P D F ++K+ + + +G H
Sbjct: 82 LFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWP-DNITFPFLIKASSEMECVLVGEQTH 140
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ + F ++ ++ ++L+++Y +C + +A +F ++ R+ V W +M++ Y +
Sbjct: 141 SQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKC-GMV 199
Query: 134 PAALELFHLMDVPPNESTFN-PIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
A E+F D P+ + F I+ A+N+ KAI L+ M + +++++
Sbjct: 200 ENAREMF---DEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
+C ++ AL + + Y +++ + + LG+ L++ + RCG + + +VF + + D
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS- 315
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
+ WSS+I A+HG A A+ F +M G P +TF VL ACSH G + L +
Sbjct: 316 -LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M++D+G+E +HY C+VD+L RAG+L E
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAE 404
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 130/302 (43%), Gaps = 32/302 (10%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLS----------LTSAR 105
+L+SC++ + IH ++ +S+ F+AS L+ L C+ L A
Sbjct: 18 LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLAL---CVDDSTFNKPTNLLGYAY 71
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD--VPPNESTFNPIIAALAAQN 163
+F +I + N V+N +I ++ + A ++ + P+ TF P + +++
Sbjct: 72 GIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITF-PFLIKASSEM 130
Query: 164 DGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLG 223
+ + +++ + + +L+ N + I G D+V +
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 224 SGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG 283
+G Y +CG + N+R +F +M +++ WS +I+ YA + + A++ F+ M+ G
Sbjct: 191 AG----YCKCGMVENAREMFDEMP--HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 284 VKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
V + + V+ +C+H G F + A Y + + + LVD+ R G +
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG----TALVDMFWRCGDI 300
Query: 341 HE 342
+
Sbjct: 301 EK 302
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 160/315 (50%), Gaps = 45/315 (14%)
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
LG + + + SF S+ +AS ++++Y C S+ A+ +FD ++ ++WN +++ YA
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYA 452
Query: 128 HSPDSLPAALELFHLMD---VPPNESTFNPIIAAL------------------------- 159
S S AL LF+ M VPPN T+N II +L
Sbjct: 453 ESGLS-GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNL 511
Query: 160 ---------AAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGY 210
QN + +AI R+M E L+P ++ L AC ++A+L++ + IHGY
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY 571
Query: 211 GIRNDIVPHPQLGS---GLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHG 267
IRN + H L S L++ Y +CG + + VF + ++ + +++ISAYAL+G
Sbjct: 572 IIRN--LQHSSLVSIETSLVDMYAKCGDINKAEKVFGS--KLYSELPLSNAMISAYALYG 627
Query: 268 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 327
K A+ ++ +E G+KPD IT VL AC+HAG + A+ FT + ++ +HY
Sbjct: 628 NLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHY 687
Query: 328 SCLVDVLSRAGRLHE 342
+VD+L+ AG +
Sbjct: 688 GLMVDLLASAGETEK 702
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 120/286 (41%), Gaps = 40/286 (13%)
Query: 31 DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASA 90
+ AL F + P D V V K+C AL+ G +H + KS F+AS+
Sbjct: 155 EGALMGFVEMLENEIFP-DNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASS 213
Query: 91 LINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNES 150
L ++YG C L A +FDEIP RN V WNA++ Y
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV----------------------- 250
Query: 151 TFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGY 210
QN +AI L+ M + ++P +T+ L A N+ + K+ H
Sbjct: 251 -----------QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAI 299
Query: 211 GIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAK 270
I N + LG+ L+ Y + G + + VF +M +KDVV W+ +IS Y G +
Sbjct: 300 AIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM--FEKDVVTWNLIISGYVQQGLVE 357
Query: 271 AALETFKEMEMAGVKPDGITFLGVLKACSHA---GFADDALCYFTR 313
A+ + M + +K D +T ++ A + + CY R
Sbjct: 358 DAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR 403
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 130/299 (43%), Gaps = 37/299 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ L+ +V ++++A+ +F + P V S L + + G HA A
Sbjct: 242 WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTV-STCLSASANMGGVEEGKQSHAIA 300
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
+ + + ++L+N Y + A +FD + ++ V WN +IS Y
Sbjct: 301 IVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYV--------- 351
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
Q AI + + M +LK +TL L+ A
Sbjct: 352 -------------------------QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
L L KE+ Y IR+ L S +++ Y +CG +V+++ VF ++KD+++W
Sbjct: 387 RTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF--DSTVEKDLILW 444
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 315
++L++AYA G + AL F M++ GV P+ IT+ ++ + G D+A F +MQ
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 43/300 (14%)
Query: 45 TLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSS--FLSNPFIASALINLYGHCLSLT 102
L + P ++ +L+ C R G IHA K+ + N +I + L+ Y C +L
Sbjct: 65 NLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALE 124
Query: 103 SARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQ 162
A LF ++ RN W A+I +
Sbjct: 125 IAEVLFSKLRVRNVFSWAAIIG-------------------------------VKCRIGL 153
Query: 163 NDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQL 222
+GA + MLE E+ P + + AC + + +HGY +++ + +
Sbjct: 154 CEGALMG---FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFV 210
Query: 223 GSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMA 282
S L + YG+CG L ++ VF ++ D ++ V W++L+ Y +G+ + A+ F +M
Sbjct: 211 ASSLADMYGKCGVLDDASKVFDEIPD--RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 283 GVKPDGITFLGVLKACSHAGFADD-----ALCYFTRMQRDYGVEASSDHYSCLVDVLSRA 337
GV+P +T L A ++ G ++ A+ M+ D + S ++ C V ++ A
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 165/337 (48%), Gaps = 44/337 (13%)
Query: 10 THSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPF 67
+H L+ +T +I + + ++AL++F + + + P+ ++ VL C +
Sbjct: 304 SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKG---VEIKPNCVTIASVLSGCGLIENLE 360
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
LG S+H + K + + +A+AL+++Y C A+++F+ ++ V WN++IS ++
Sbjct: 361 LGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFS 419
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
QN +A+ L+ RM + P +T
Sbjct: 420 ----------------------------------QNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQL--GSGLIEAYGRCGCLVNSRNVFWK 245
+ +L AC ++ +L + +H Y ++ + + G+ L++ Y +CG ++R +F
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT 505
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
+ + K+ + WS++I Y G+ +LE F+EM KP+ TF +L AC H G +
Sbjct: 506 IEE--KNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563
Query: 306 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ YF+ M +DY S+ HY+C+VD+L+RAG L +
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQ 600
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 134/293 (45%), Gaps = 38/293 (12%)
Query: 10 THSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLG 69
T ++ +T +I +V ++ L +F+ + L + + + ++ +CT L G
Sbjct: 203 TLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG-NEYTYGTLIMACTKLSALHQG 261
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
H KS + + ++L+++Y C +++AR +F+E H + V+W AMI Y H+
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
S+ AL LF ++M +E+KP +T+
Sbjct: 322 G-SVNEALSLF---------------------------------QKMKGVEIKPNCVTIA 347
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
++L C + L L + +HG I+ I + + L+ Y +C +++ VF +
Sbjct: 348 SVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVF--EMES 404
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
+KD+V W+S+IS ++ +G AL F M V P+G+T + AC+ G
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 37/251 (14%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D VFS LK+CT L+ G IH K N + + L+++Y C + SA +F
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN-VVLTGLLDMYAKCGEIKSAHKVF 199
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
++I RN V W +MI+ Y +ND +
Sbjct: 200 NDITLRNVVCWTSMIAGYV----------------------------------KNDLCEE 225
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
+ L+ RM E + T L+ AC ++AL+ K HG +++ I L + L++
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 288
Y +CG + N+R VF + + D+V+W+++I Y +G AL F++M+ +KP+
Sbjct: 286 MYVKCGDISNARRVFNEHSHV--DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 289 ITFLGVLKACS 299
+T VL C
Sbjct: 344 VTIASVLSGCG 354
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 178/386 (46%), Gaps = 69/386 (17%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+I +++ ++ + ++ + D F+ + KSC+ + G +H+ +
Sbjct: 48 MIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRF 107
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVW-------------------- 119
F ++ ++++ ++++Y + AR+ FDE+PHR+EV W
Sbjct: 108 GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF 167
Query: 120 ------------NAMISLYAHSPDSLPAALELF--------------------------- 140
NAM+ + S D + +A LF
Sbjct: 168 DQMPHVKDVVIYNAMMDGFVKSGD-MTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAA 226
Query: 141 -HLMDVPP--NESTFNPIIAALAAQNDGAFKAIALYRRML-ELELKPRLITLLALLPACV 196
L D P N ++N +I QN + I L++ M L P +T+L++LPA
Sbjct: 227 RKLFDAMPERNLVSWNTMIGGYC-QNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
+ AL+L + H + R + ++ + +++ Y +CG + ++ +F +M + K V W
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE--KQVASW 343
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
+++I YAL+G A+AAL+ F M M KPD IT L V+ AC+H G ++ +F M R
Sbjct: 344 NAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-R 401
Query: 317 DYGVEASSDHYSCLVDVLSRAGRLHE 342
+ G+ A +HY C+VD+L RAG L E
Sbjct: 402 EMGLNAKIEHYGCMVDLLGRAGSLKE 427
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Query: 2 ASSSYYSATHSR-LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC 60
A+ + A R L+ + +I + + + + +F + +T +L D VL +
Sbjct: 225 AARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAI 284
Query: 61 TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
+ LG H + + +A++++Y C + A+ +FDE+P + WN
Sbjct: 285 SDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWN 344
Query: 121 AMISLYAHSPDSLPAALELF--HLMDVPPNESTFNPIIAA 158
AMI YA + ++ AAL+LF +++ P+E T +I A
Sbjct: 345 AMIHGYALNGNA-RAALDLFVTMMIEEKPDEITMLAVITA 383
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 159/330 (48%), Gaps = 42/330 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLT-LPLDPHVFSLVLKSCTALRRPFLGASI 72
L+ + L++S+V D+A + + S D FS +L +C R G I
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQI 263
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
HA K S+ + +A+AL+N+Y L+ AR F+ + RN V WNAMI +A
Sbjct: 264 HAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFA----- 318
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
QN +A+ L+ +ML L+P +T ++L
Sbjct: 319 -----------------------------QNGEGREAMRLFGQMLLENLQPDELTFASVL 349
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
+C +A+ IK++ + + + LI +Y R G L + F +R+ D
Sbjct: 350 SSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE--PD 407
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
+V W+S+I A A HG A+ +L+ F+ M + ++PD ITFL VL ACSH G + L F
Sbjct: 408 LVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFK 466
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
RM Y +EA +HY+CL+D+L RAG + E
Sbjct: 467 RMTEFYKIEAEDEHYTCLIDLLGRAGFIDE 496
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 45/300 (15%)
Query: 46 LPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSAR 105
+ LD F +++ CT G +H K S+ F +++L++ YG C + AR
Sbjct: 138 VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEAR 197
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG 165
+F+ + R+ V+WNA++S Y + + A L LM N
Sbjct: 198 RVFEAVLDRDLVLWNALVSSYVLNG-MIDEAFGLLKLMGSDKN----------------- 239
Query: 166 AFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG 225
+ T +LL AC + K+IH + + +
Sbjct: 240 --------------RFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATA 281
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
L+ Y + L ++R F M + ++VV W+++I +A +GE + A+ F +M + ++
Sbjct: 282 LLNMYAKSNHLSDARECFESM--VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 286 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC---LVDVLSRAGRLHE 342
PD +TF VL +C A F+ A+ ++Q + S+D S L+ SR G L E
Sbjct: 340 PDELTFASVLSSC--AKFS--AIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSE 395
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 33/228 (14%)
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
H K ++ F+ + L+ Y A LFDE+P RN V WN +I
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILI--------- 109
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
+ +I N A R+L ++ ++ + L+
Sbjct: 110 --------------------HGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLI 149
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
C + + ++H ++ + + L+ YG+CG +V +R VF + +D+D
Sbjct: 150 RLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV--LDRD 207
Query: 253 VVVWSSLISAYALHGEAKAALETFKEM--EMAGVKPDGITFLGVLKAC 298
+V+W++L+S+Y L+G A K M + + D TF +L AC
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 144/296 (48%), Gaps = 38/296 (12%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
D + S ++SC R G+ H A K F+S+ ++ S+L+ LY + +A +
Sbjct: 118 FDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKV 177
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
F+E+P RN V W AMIS +A +D+
Sbjct: 178 FEEMPERNVVSWTAMISGFAQE-----------WRVDI---------------------- 204
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
+ LY +M + P T ALL AC AL + +H + + + + + LI
Sbjct: 205 -CLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLI 263
Query: 228 EAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFK-EMEMAGVKP 286
Y +CG L ++ +F + + KDVV W+S+I+ YA HG A A+E F+ M +G KP
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSN--KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
D IT+LGVL +C HAG + +F M ++G++ +HYSCLVD+L R G L E
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQE 376
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 47/276 (17%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I+ + R D L ++ + + + P D + F+ +L +CT G S+H
Sbjct: 189 WTAMISGFAQEWRVDICLKLYSKMRKSTSDPND-YTFTALLSACTGSGALGQGRSVHCQT 247
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
S I+++LI++Y C L A +FD+ +++ V WN+MI+ YA ++ A
Sbjct: 248 LHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQA- 306
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
+ELF LM P T KP IT L +L +C
Sbjct: 307 IELFELM--MPKSGT------------------------------KPDAITYLGVLSSCR 334
Query: 197 NVAALNLIKEIHGYGIRNDIVPH---PQLG--SGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
+ L+KE G N + H P+L S L++ GR G L + + M M
Sbjct: 335 HAG---LVKE--GRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENM-PMKP 388
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
+ V+W SL+ + +HG+ + +E M ++PD
Sbjct: 389 NSVIWGSLLFSCRVHGDVWTGIRAAEERLM--LEPD 422
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 163/326 (50%), Gaps = 43/326 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ LI+ + +++ A+ ++ + P D F VLK+C + +G +IH
Sbjct: 163 WNSLISGYAELGQYEDAMALYFQMAEDGVKP-DRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K F + ++ +AL+ +Y C + AR++FD IPH++ V WN+M++ Y H
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG------ 275
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
L H +A+ ++R M++ ++P + + ++L
Sbjct: 276 --LLH--------------------------EALDIFRLMVQNGIEPDKVAISSVL---A 304
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
V + +++HG+ IR + + + LI Y + G L + +F +M +++D V W
Sbjct: 305 RVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM--LERDTVSW 362
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
+++ISA H + L+ F++M A KPDGITF+ VL C++ G +D F+ M +
Sbjct: 363 NAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSK 419
Query: 317 DYGVEASSDHYSCLVDVLSRAGRLHE 342
+YG++ +HY+C+V++ RAG + E
Sbjct: 420 EYGIDPKMEHYACMVNLYGRAGMMEE 445
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 42/251 (16%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
+P +F+ +L++C +LR G +H +N I+S L+ LY C A +F
Sbjct: 91 EPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVF 150
Query: 109 DEIPHRNE--VVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGA 166
D + R+ WN++IS YA EL D
Sbjct: 151 DRMSKRDSSPFAWNSLISGYA----------ELGQYED---------------------- 178
Query: 167 FKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGL 226
A+ALY +M E +KP T +L AC + ++ + + IH ++ + + L
Sbjct: 179 --AMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNAL 236
Query: 227 IEAYGRCGCLVNSRNVFWKMRDM--DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGV 284
+ Y +CG +V +RNVF DM KD V W+S+++ Y HG AL+ F+ M G+
Sbjct: 237 VVMYAKCGDIVKARNVF----DMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGI 292
Query: 285 KPDGITFLGVL 295
+PD + VL
Sbjct: 293 EPDKVAISSVL 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 190 ALLPACVNVAALNLIKEIH----GYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
+LL C ++ A++ +H Y +RN++ + S L+ Y CG + VF +
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNL----GISSKLVRLYASCGYAEVAHEVFDR 152
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
M D W+SLIS YA G+ + A+ + +M GVKPD TF VLKAC G
Sbjct: 153 MSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIG 209
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 164/335 (48%), Gaps = 54/335 (16%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC-----TALRRPFLGAS 71
+T ++T +V + + ++AL ++ + P++F++ + +RR G
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSR--PNIFTVSIAVAAAAAVKCIRR---GKE 239
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
IH H ++ S+ + S+L+++YG C + AR++FD+I ++ V W +MI Y S
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS- 298
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
E F L F+ ++ + +P T +
Sbjct: 299 ---RWREGFSL---------FSELVGSCE---------------------RPNEYTFAGV 325
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
L AC ++ L K++HGY R P+ S L++ Y +CG + ++++V +D
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV------VDG 379
Query: 252 ----DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 307
D+V W+SLI A +G+ AL+ F + +G KPD +TF+ VL AC+HAG +
Sbjct: 380 CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 439
Query: 308 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
L +F + + + +SDHY+CLVD+L+R+GR +
Sbjct: 440 LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQ 474
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 141/290 (48%), Gaps = 13/290 (4%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRN 115
+++ C+ R G +H H S F+ I + L+ +Y C SL AR +FDE+P+R+
Sbjct: 91 LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRD 150
Query: 116 EVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRR 175
WN M++ YA L A +LF M + ++ ++ + D +A+ LY
Sbjct: 151 LCSWNVMVNGYAEV-GLLEEARKLFDEM-TEKDSYSWTAMVTGY-VKKDQPEEALVLYSL 207
Query: 176 MLEL-ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG 234
M + +P + T+ + A V + KEIHG+ +R + L S L++ YG+CG
Sbjct: 208 MQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267
Query: 235 CLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGV 294
C+ +RN+F K+ ++KDVV W+S+I Y + F E+ + +P+ TF GV
Sbjct: 268 CIDEARNIFDKI--VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 295 LKACSH---AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
L AC+ Y TR+ G + S S LVD+ ++ G +
Sbjct: 326 LNACADLTTEELGKQVHGYMTRV----GFDPYSFASSSLVDMYTKCGNIE 371
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
KP T L+ C AL K++H + + VP + + L+ Y +CG LV++R
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
VF +M ++D+ W+ +++ YA G + A + F EM + D ++ ++
Sbjct: 142 VFDEM--PNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSYSWTAMVTGYVKK 195
Query: 302 GFADDALCYFTRMQR 316
++AL ++ MQR
Sbjct: 196 DQPEEALVLYSLMQR 210
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 150/285 (52%), Gaps = 35/285 (12%)
Query: 89 SALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPP- 147
+ ++ YG + AR +FD +P + EV W +M+ Y + + A ELF +M V P
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQN-GRIEDAEELFEVMPVKPV 265
Query: 148 -----------------------------NESTFNPIIAALAAQNDGAFKAIALYRRMLE 178
N++++ +I + +N +A+ L+ M +
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI-KIHERNGFELEALDLFILMQK 324
Query: 179 LELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVN 238
++P TL+++L C ++A+L+ K++H +R + S L+ Y +CG LV
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 239 SRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKA 297
S+ +F R KD+++W+S+IS YA HG + AL+ F EM ++G KP+ +TF+ L A
Sbjct: 385 SKLIF--DRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Query: 298 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
CS+AG ++ L + M+ +GV+ + HY+C+VD+L RAGR +E
Sbjct: 443 CSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNE 487
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I H +AL +F + P P + S +L C +L G +HA
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS-ILSVCASLASLHHGKQVHAQL 357
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH---SPDSL 133
+ F + ++AS L+ +Y C L ++ +FD P ++ ++WN++IS YA ++L
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAA 161
E+ PNE TF +A L+A
Sbjct: 418 KVFCEMPLSGSTKPNEVTF---VATLSA 442
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 164/324 (50%), Gaps = 38/324 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ +T +I + H +AL +F + + + +D + +L++ + L+ + IH
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDV-AKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
H + L + I + L+++YG C ++ A +F+ I ++ V W +MIS A
Sbjct: 511 CHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA------ 563
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
+ NES +A+ L+RRM+E L + LL +L
Sbjct: 564 -----------LNGNES-----------------EAVELFRRMVETGLSADSVALLCILS 595
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
A +++ALN +EIH Y +R + +++ Y CG L +++ VF ++ K +
Sbjct: 596 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER--KGL 653
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
+ ++S+I+AY +HG KAA+E F +M V PD I+FL +L ACSHAG D+ +
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKI 713
Query: 314 MQRDYGVEASSDHYSCLVDVLSRA 337
M+ +Y +E +HY CLVD+L RA
Sbjct: 714 MEHEYELEPWPEHYVCLVDMLGRA 737
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 39/283 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I ++V+ AL ++ ++ +PL F +LK+C LR G+ +H+
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVE-GVPLGLSSFPALLKACAKLRDIRSGSELHSLL 208
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNE-VVWNAMISLYAHSPDSLPA 135
K + S FI +AL+++Y L++AR LFD + + V+WN+++S Y+ S SL
Sbjct: 209 VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSL-- 266
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
+ + L+R M P T+++ L AC
Sbjct: 267 --------------------------------ETLELFREMHMTGPAPNSYTIVSALTAC 294
Query: 196 VNVAALNLIKEIHGYGIRNDI-VPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
+ L KEIH +++ + + LI Y RCG + + + +M + DVV
Sbjct: 295 DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN--NADVV 352
Query: 255 VWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 297
W+SLI Y + K ALE F +M AG K D ++ ++ A
Sbjct: 353 TWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 42/294 (14%)
Query: 51 HVFSLVLKSCTALRRPFLGASIHAHAAKS--SFLSNPFIASALINLYGHCLSLTSARHLF 108
F+ VL+ C R G +H+ K+ SF + F+A L+ +YG C SL A +F
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVF 139
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
DE+P R WN MI Y + + PA+
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGE--PAS-------------------------------- 165
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
A+ALY M + L + ALL AC + + E+H ++ + + L+
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 288
Y + L +R +F ++ D V+W+S++S+Y+ G++ LE F+EM M G P+
Sbjct: 226 MYAKNDDLSAARRLFDGFQE-KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNS 284
Query: 289 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC--LVDVLSRAGRL 340
T + L AC GF+ L SS+ Y C L+ + +R G++
Sbjct: 285 YTIVSALTACD--GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKM 336
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 124/284 (43%), Gaps = 38/284 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +++S+ + + L +F +H T P + + L +C LG IHA
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAP-NSYTIVSALTACDGFSYAKLGKEIHASV 310
Query: 77 AKSSFLSNP-FIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPA 135
KSS S+ ++ +ALI +Y C + A + ++ + + V WN++I Y +
Sbjct: 311 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL-MYKE 369
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
ALE F M ++S + + +AA RL LLA +
Sbjct: 370 ALEFFSDMIAAGHKSDEVSMTSIIAASG--------------------RLSNLLAGM--- 406
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
E+H Y I++ + Q+G+ LI+ Y +C F +M DKD++
Sbjct: 407 ----------ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH--DKDLIS 454
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
W+++I+ YA + ALE F+++ ++ D + +L+A S
Sbjct: 455 WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 145/338 (42%), Gaps = 56/338 (16%)
Query: 10 THSRLLYFTKLITSHVNQSRHDQALTVFHHI----HSTLTLPLDPHVFSLVLKSCTALRR 65
++ ++ + LI +V + +AL F + H + D + ++ + L
Sbjct: 347 NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-----DEVSMTSIIAASGRLSN 401
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
G +HA+ K + SN + + LI++Y C F + ++ + W +I+
Sbjct: 402 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAG 461
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
YA QND +A+ L+R + + ++
Sbjct: 462 YA----------------------------------QNDCHVEALELFRDVAKKRMEIDE 487
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
+ L ++L A + ++ ++KEIH + +R ++ + + L++ YG+C + + VF
Sbjct: 488 MILGSILRASSVLKSMLIVKEIHCHILRKGLLD-TVIQNELVDVYGKCRNMGYATRVFES 546
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
++ KDVV W+S+IS+ AL+G A+E F+ M G+ D + L +L A + +
Sbjct: 547 IKG--KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALN 604
Query: 306 DAL---CYFTRMQRDYGVEAS-----SDHYSCLVDVLS 335
CY R + + +E S D Y+C D+ S
Sbjct: 605 KGREIHCYLLR--KGFCLEGSIAVAVVDMYACCGDLQS 640
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 47/275 (17%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A+ + S ++ +T +I+S +A+ +F + T L D +L +
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVET-GLSADSVALLCILSAAA 598
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
+L G IH + + F IA A++++Y C L SA+ +FD I + + + +
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
MI+ Y AA+ELF +M +
Sbjct: 659 MINAYGMHGCG-KAAVELFD---------------------------------KMRHENV 684
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGI------RNDIVPHPQLGSGLIEAYGRCGC 235
P I+ LALL AC + L+ G G ++ P P+ L++ GR C
Sbjct: 685 SPDHISFLALLYACSHAGLLD-----EGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANC 739
Query: 236 LVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAK 270
+V + F KM + VW +L++A H E +
Sbjct: 740 VVEAFE-FVKMMKTEPTAEVWCALLAACRSHSEKE 773
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 139/294 (47%), Gaps = 37/294 (12%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D L+L++C+A R G IH K F S+ F++SAL+ +Y L AR LF
Sbjct: 133 DDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLF 192
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
D++P R+ V++ AM Y Q A
Sbjct: 193 DDMPVRDSVLYTAMFGGYV----------------------------------QQGEAML 218
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
+A++R M + +++LL AC + AL K +HG+ IR LG+ + +
Sbjct: 219 GLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITD 278
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 288
Y +C L + VF M +DV+ WSSLI Y L G+ + + F EM G++P+
Sbjct: 279 MYVKCSILDYAHTVFVNMSR--RDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNA 336
Query: 289 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+TFLGVL AC+H G + + YF R+ ++Y + HY+ + D +SRAG L E
Sbjct: 337 VTFLGVLSACAHGGLVEKSWLYF-RLMQEYNIVPELKHYASVADCMSRAGLLEE 389
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 132/276 (47%), Gaps = 36/276 (13%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G +H A + S+ I ++LI++Y C + +F + W+A+I
Sbjct: 338 GKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAII----- 392
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
A QN+ A+ L++RM +++P + TL
Sbjct: 393 -----------------------------AGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+LLPA +A L IH Y + + +GL+ Y +CG L ++ +F +++
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 249 M--DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 306
KDVV+W +LIS Y +HG+ AL+ F EM +GV P+ ITF L ACSH+G ++
Sbjct: 484 KHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEE 543
Query: 307 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
L F M Y A S+HY+C+VD+L RAGRL E
Sbjct: 544 GLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDE 579
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 37/300 (12%)
Query: 11 HSRLLYFTKLITSHVNQSRHDQALTVF-HHIHSTLTLPLDPHVFSLVLKSCTALRRPFLG 69
S LL + +I +V + + A++VF + + D + + V K+ L+ LG
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
+H +S F + ++ +AL+ +Y + + AR +FD + +R+ + WN MIS Y +
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGY-YR 195
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
+ AL +F M NES ++L+ T++
Sbjct: 196 NGYMNDALMMFDWM---VNES--------------------------VDLDHA----TIV 222
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
++LP C ++ L + + +H + ++ + L+ Y +CG + +R VF +M
Sbjct: 223 SMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMER- 281
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
+DV+ W+ +I+ Y G+ + ALE + M+ GV+P+ +T ++ C A +D C
Sbjct: 282 -RDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKC 340
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 140/346 (40%), Gaps = 48/346 (13%)
Query: 1 MASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC 60
MA + + ++ + +I+ + + AL +F + + ++ LD +L C
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNE-SVDLDHATIVSMLPVC 228
Query: 61 TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
L+ +G ++H + + +AL+N+Y C + AR +FD + R+ + W
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWT 288
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE 180
MI+ Y D + ALEL LM Q +G
Sbjct: 289 CMINGYTEDGD-VENALELCRLM------------------QFEG--------------- 314
Query: 181 LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
++P +T+ +L+ C + +N K +HG+ +R + + + LI Y +C +
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 241 NVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
VF WS++I+ + AL FK M V+P+ T +L A +
Sbjct: 375 RVFSGASKYHTG--PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--Y 430
Query: 301 AGFAD-----DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
A AD + CY T+ G +S D + LV V S+ G L
Sbjct: 431 AALADLRQAMNIHCYLTKT----GFMSSLDAATGLVHVYSKCGTLE 472
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPFLGASIHA 74
++ +I V AL +F + ++P++ +L +L + AL +IH
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRRE---DVEPNIATLNSLLPAYAALADLRQAMNIHC 444
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNE----VVWNAMISLYAHSP 130
+ K+ F+S+ A+ L+++Y C +L SA +F+ I +++ V+W A+IS Y
Sbjct: 445 YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHG 504
Query: 131 DSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLE 178
D AL++F M V PNE TF + A + + + + L+R MLE
Sbjct: 505 DG-HNALQVFMEMVRSGVTPNEITFTSALNA-CSHSGLVEEGLTLFRFMLE 553
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 166/328 (50%), Gaps = 41/328 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPFLGASIHA 74
+ LI H +D L++ H+ ++ L P F++ +L +C+ L+ LG +H
Sbjct: 464 WNALIGGHAQS--NDPRLSLDAHLQMKIS-GLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLP 134
++ + F+ ++++LY HC L + + LFD + ++ V WN +I+ Y
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYL------- 573
Query: 135 AALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
QN +A+ ++R+M+ ++ I+++ + A
Sbjct: 574 ---------------------------QNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
C + +L L +E H Y +++ + + LI+ Y + G + S VF +++ K
Sbjct: 607 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE--KSTA 664
Query: 255 VWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 314
W+++I Y +HG AK A++ F+EM+ G PD +TFLGVL AC+H+G + L Y +M
Sbjct: 665 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 724
Query: 315 QRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ +G++ + HY+C++D+L RAG+L +
Sbjct: 725 KSSFGLKPNLKHYACVIDMLGRAGQLDK 752
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 145/300 (48%), Gaps = 35/300 (11%)
Query: 7 YSATHSRLLY-FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
+ A S+ L+ + +I+S+ +D+ L F + ST L D + V+K+C +
Sbjct: 143 FDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSD 202
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
+G ++H K+ + + F+ +AL++ YG +T A LFD +P RN V WN+MI +
Sbjct: 203 VGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRV 262
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
++ + S + L L +M+ DGAF P +
Sbjct: 263 FSDNGFSEESFLLLGEMME----------------ENGDGAF--------------MPDV 292
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
TL+ +LP C + L K +HG+ ++ + L + L++ Y +CGC+ N++ +F K
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-K 351
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG--VKPDGITFLGVLKACSHAGF 303
M + +K+VV W++++ ++ G+ + ++M G VK D +T L + C H F
Sbjct: 352 MNN-NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 36/252 (14%)
Query: 50 PHVFSLV--LKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
P V +LV L C R LG +H A K + +AL+++Y C +T+A+ +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
F ++N V WN M+ ++ D+ TF+ + LA D
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDT----------------HGTFDVLRQMLAGGED--- 390
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
+K +T+L +P C + + L +KE+H Y ++ + V + + + +
Sbjct: 391 -------------VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFV 437
Query: 228 EAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
+Y +CG L ++ VF +R K V W++LI +A + + +L+ +M+++G+ PD
Sbjct: 438 ASYAKCGSLSYAQRVFHGIR--SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Query: 288 GITFLGVLKACS 299
T +L ACS
Sbjct: 496 SFTVCSLLSACS 507
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 143/307 (46%), Gaps = 34/307 (11%)
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
P L H + F N +++I Y + SAR LFD++ R+ + WN MI
Sbjct: 262 PDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDG 321
Query: 126 YAHSPDSLPAALELF----------------------------HLMDVPPNEST--FNPI 155
Y H + A LF H + P + T +N I
Sbjct: 322 YVHVS-RMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSI 380
Query: 156 IAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRND 215
IAA D +A+ L+ RM KP TL +LL A + L L ++H ++
Sbjct: 381 IAAYEKNKDYK-EAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT- 438
Query: 216 IVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALET 275
++P + + LI Y RCG ++ SR +F +M+ + ++V+ W+++I YA HG A AL
Sbjct: 439 VIPDVPVHNALITMYSRCGEIMESRRIFDEMK-LKREVITWNAMIGGYAFHGNASEALNL 497
Query: 276 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 335
F M+ G+ P ITF+ VL AC+HAG D+A F M Y +E +HYS LV+V S
Sbjct: 498 FGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTS 557
Query: 336 RAGRLHE 342
G+ E
Sbjct: 558 GQGQFEE 564
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 33/236 (13%)
Query: 101 LTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALA 160
L AR LFDE+P R+ WN MIS YA + + AL LF M N +++ +I
Sbjct: 121 LEEARKLFDEMPSRDSFSWNTMISGYAKNR-RIGEALLLFEKMP-ERNAVSWSAMITGF- 177
Query: 161 AQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHG-YGI----RND 215
QN A+ L+R+M + P L AL+ + L+ + G YG R D
Sbjct: 178 CQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGRED 233
Query: 216 IVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM-------------DKDVVVWSSLISA 262
+V + LI YG+ G + +R +F ++ D+ K+VV W+S+I A
Sbjct: 234 LV---YAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKA 290
Query: 263 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM-QRD 317
Y G+ +A F +M+ D I++ ++ H +DA F+ M RD
Sbjct: 291 YLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD 342
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 6 YYSATHSR-LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALR 64
Y+ T + + + +I ++ + +A+ +F ++ P DPH + +L + T L
Sbjct: 365 YFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKP-DPHTLTSLLSASTGLV 423
Query: 65 RPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVV-WNAMI 123
LG +H K+ P + +ALI +Y C + +R +FDE+ + EV+ WNAMI
Sbjct: 424 NLRLGMQMHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Query: 124 SLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALA 160
YA ++ AL LF M + P+ TF ++ A A
Sbjct: 483 GGYAFHGNA-SEALNLFGSMKSNGIYPSHITFVSVLNACA 521
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 168/341 (49%), Gaps = 6/341 (1%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + + +H ++ + +I + D+A +F + + +P D + ++ +C
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP-DEMILCNIVSACG 223
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
+I+ ++ + + +AL+ +Y + AR F ++ RN V A
Sbjct: 224 RTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTA 283
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
M+S Y+ L A +F + + + +I+A ++D +A+ ++ M +
Sbjct: 284 MVSGYSKC-GRLDDAQVIFDQTE-KKDLVCWTTMISAYV-ESDYPQEALRVFEEMCCSGI 340
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
KP ++++ +++ AC N+ L+ K +H N + + + LI Y +CG L +R+
Sbjct: 341 KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRD 400
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
VF KM ++VV WSS+I+A ++HGEA AL F M+ V+P+ +TF+GVL CSH+
Sbjct: 401 VFEKMPR--RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458
Query: 302 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G ++ F M +Y + +HY C+VD+ RA L E
Sbjct: 459 GLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLRE 499
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 144/287 (50%), Gaps = 13/287 (4%)
Query: 25 VNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSN 84
+++S +A +F+ + LD F +LK+ + + F G +H A K + L +
Sbjct: 86 LSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCD 145
Query: 85 PFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLM- 143
PF+ + +++Y C + AR++FDE+ HR+ V WN MI Y + A +LF M
Sbjct: 146 PFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF-GLVDEAFKLFEEMK 204
Query: 144 --DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAAL 201
+V P+E I++A + + A+Y ++E +++ L AL+ +
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNR-AIYEFLIENDVRMDTHLLTALVTMYAGAGCM 263
Query: 202 NLIKE-IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLI 260
++ +E +RN V + ++ Y +CG L +++ +F + KD+V W+++I
Sbjct: 264 DMAREFFRKMSVRNLFV-----STAMVSGYSKCGRLDDAQVIFDQTE--KKDLVCWTTMI 316
Query: 261 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 307
SAY + AL F+EM +G+KPD ++ V+ AC++ G D A
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
AL +F + PP FNP + L+ ++ I Y+R+ + + + L +L A
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPR-ATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
V+AL E+HG + + P + +G ++ Y CG + +RNVF +M +DVV
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS--HRDVVT 179
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
W+++I Y G A + F+EM+ + V PD + ++ AC G
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG 226
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 47/279 (16%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTAL----RRPFLG 69
L+ +T +I+++V +AL VF + + P +FS V+ +C L + ++
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS-VISACANLGILDKAKWVH 367
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
+ IH + +S N +ALIN+Y C L + R +F+++P RN V W++MI+
Sbjct: 368 SCIHVNGLESELSIN----NALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMIN----- 418
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
AL+ + + A++L+ RM + ++P +T +
Sbjct: 419 ----------------------------ALSMHGEAS-DALSLFARMKQENVEPNEVTFV 449
Query: 190 ALLPACVNVAALNLIKEIHGYGIRN-DIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+L C + + K+I +I P + +++ +GR L + V M
Sbjct: 450 GVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM-P 508
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
+ +VV+W SL+SA +HGE + L F + ++PD
Sbjct: 509 VASNVVIWGSLMSACRIHGELE--LGKFAAKRILELEPD 545
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 136/297 (45%), Gaps = 36/297 (12%)
Query: 46 LPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSAR 105
L ++P ++++L+ C + G IHA F N ++ L+ LY L +A
Sbjct: 104 LQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 163
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG 165
LF + R+ + WNAMIS Y + +G
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQK------------------------------GLEQEG 193
Query: 166 AFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG 225
F +Y M + + P T ++ AC + L K H I+ I + + S
Sbjct: 194 LF----IYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSA 249
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
L++ Y +C + VF ++ ++V+ W+SLIS Y HG+ L+ F++M+ G +
Sbjct: 250 LVDMYFKCSSFSDGHRVFDQLST--RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCR 307
Query: 286 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
P+ +TFL VL AC+H G D +F M+RDYG+E HY+ +VD L RAGRL E
Sbjct: 308 PNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 39/259 (15%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + +I+ +V + + L +++ + +P D + F+ V ++C+AL R G H
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVP-DQYTFASVFRACSALDRLEHGKRAH 232
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
A K SN + SAL+++Y C S + +FD++ RN + W ++IS Y +
Sbjct: 233 AVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGY----- 287
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
+ + + + +M E +P +T L +L
Sbjct: 288 -----------------------------HGKVSEVLKCFEKMKEEGCRPNPVTFLVVLT 318
Query: 194 ACVNVAALNLIKEIHGYGIRND--IVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
AC + ++ E H Y ++ D I P Q + +++ GR G L + K +
Sbjct: 319 ACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMK-SPCKE 376
Query: 252 DVVVWSSLISAYALHGEAK 270
VW SL+ A +HG K
Sbjct: 377 HPPVWGSLLGACRIHGNVK 395
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 39/330 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + ++ +V+ D+AL + + +D +L C+ + +G H
Sbjct: 360 IVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE-NIDNVTLVWILNVCSGISDVQMGKQAH 418
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPH-RNEVVWNAMISLYAHSPDS 132
+ + +N +A+AL+++YG C +L SA F ++ R+EV WNA+++ A S
Sbjct: 419 GFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRS 478
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
AL F M V E KP TL LL
Sbjct: 479 -EQALSFFEGMQV----------------------------------EAKPSKYTLATLL 503
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
C N+ ALNL K IHG+ IR+ + +++ Y +C C + VF +D
Sbjct: 504 AGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVF--KEAATRD 561
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
+++W+S+I +G +K E F +E GVKPD +TFLG+L+AC G + YF+
Sbjct: 562 LILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFS 621
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M Y + +HY C++++ + G LH+
Sbjct: 622 SMSTKYHISPQVEHYDCMIELYCKYGCLHQ 651
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 146/283 (51%), Gaps = 10/283 (3%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
++ ++ +D+A+ +F + PL+ H S V+ +C+ +G IHA A K
Sbjct: 234 IVRRYLEMGFNDEAVVMFFKMLELNVRPLN-HTVSSVMLACSRSLALEVGKVIHAIAVKL 292
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
S +++ +++++ ++Y C L SAR +FD+ ++ W + +S YA S + A EL
Sbjct: 293 SVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAR-EL 351
Query: 140 FHLMDVPPNESTFNPIIAAL--AAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVN 197
F LM N ++N ++ A + D A + L R+ +E +TL+ +L C
Sbjct: 352 FDLMP-ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE---NIDNVTLVWILNVCSG 407
Query: 198 VAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWS 257
++ + + K+ HG+ R+ + + + L++ YG+CG L S N++++ +D V W+
Sbjct: 408 ISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTL-QSANIWFRQMSELRDEVSWN 466
Query: 258 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
+L++ A G ++ AL F+ M++ KP T +L C++
Sbjct: 467 ALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCAN 508
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 137/301 (45%), Gaps = 41/301 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +IT+ D+ +F ++ + F+ VLKSC + L +H
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETS-FAGVLKSCGLILDLRLLRQLHCAV 188
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K + N + ++++++YG C ++ AR +FDEI + ++V WN ++ Y
Sbjct: 189 VKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYL--------- 239
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
E FN +A+ ++ +MLEL ++P T+ +++ AC
Sbjct: 240 ------------EMGFND-------------EAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
AL + K IH ++ +V + + + + Y +C L ++R VF + R KD+ W
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR--SKDLKSW 332
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
+S +S YA+ G + A E F M + +++ +L HA D+AL + T M++
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMPERNI----VSWNAMLGGYVHAHEWDEALDFLTLMRQ 388
Query: 317 D 317
+
Sbjct: 389 E 389
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 123/298 (41%), Gaps = 46/298 (15%)
Query: 10 THSRL------LYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTAL 63
TH R+ L T+ I H+ +A++V P+ ++ + +SC++
Sbjct: 19 THKRVIGTGTKLTVTRQILEHLEGGNVSKAVSVLFASPE----PVSYWLYERLFRSCSSK 74
Query: 64 RRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMI 123
+ +H S L F+ + I YG C + AR LF+E+P R+ WNA+I
Sbjct: 75 ALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVI 134
Query: 124 SLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKP 183
+ AQN + + ++RRM ++
Sbjct: 135 TA----------------------------------CAQNGVSDEVFRMFRRMNRDGVRA 160
Query: 184 RLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVF 243
+ +L +C + L L++++H ++ + L + +++ YG+C + ++R VF
Sbjct: 161 TETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVF 220
Query: 244 WKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
++ ++ V W+ ++ Y G A+ F +M V+P T V+ ACS +
Sbjct: 221 DEI--VNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRS 276
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 17/153 (11%)
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
L +C + A + +++ + + +P L + IEAYG+CGC+ ++R +F +M +
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP--E 124
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 310
+D W+++I+A A +G + F+ M GV+ +F GVLK+C L
Sbjct: 125 RDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC--------GLIL 176
Query: 311 FTRMQRD-------YGVEASSDHYSCLVDVLSR 336
R+ R YG + D + +VDV +
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGK 209
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 167/338 (49%), Gaps = 25/338 (7%)
Query: 18 TKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPFLGASIHAH 75
T +I V +SRH +A F + L L + P+ F+ V+ S T R LG +H +
Sbjct: 62 TAVIGRFVKESRHVEASQAFKRL---LCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCY 118
Query: 76 AAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPA 135
A K SN F+ SA++N Y +LT AR FD+ N V +IS Y +
Sbjct: 119 ALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHE-FEE 177
Query: 136 ALELFHLMDVPPNES--TFNPIIAALAAQNDGAFKAIALYRRML-ELELKPRLITLLALL 192
AL LF M P S T+N +I +Q +A+ + ML E + P T +
Sbjct: 178 ALSLFRAM---PERSVVTWNAVIGGF-SQTGRNEEAVNTFVDMLREGVVIPNESTFPCAI 233
Query: 193 PACVNVAALNLIKEIHG-----YGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
A N+A+ K IH G R ++ + + LI Y +CG + +S F K+
Sbjct: 234 TAISNIASHGAGKSIHACAIKFLGKRFNVF----VWNSLISFYSKCGNMEDSLLAFNKLE 289
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADD 306
+ +++V W+S+I YA +G + A+ F++M + ++P+ +T LGVL AC+HAG +
Sbjct: 290 EEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQE 349
Query: 307 ALCYFTRMQRDYGVEA--SSDHYSCLVDVLSRAGRLHE 342
YF + DY +HY+C+VD+LSR+GR E
Sbjct: 350 GYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKE 387
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 155/333 (46%), Gaps = 37/333 (11%)
Query: 10 THSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLG 69
+H ++ T +I+ + H+ L +F + L P S L +C+ +R G
Sbjct: 217 SHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLS-ALAACSGSQRIVEG 275
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
IHA K S I SAL+++Y C S+ A +F+ +EV
Sbjct: 276 QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEV------------ 323
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
+ I+ LA QN +AI + RML+ ++ +
Sbjct: 324 ---------------------SMTVILVGLA-QNGSEEEAIQFFIRMLQAGVEIDANVVS 361
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
A+L +L L K++H I+ + + +GLI Y +CG L +S+ VF +M
Sbjct: 362 AVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPK- 420
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
++ V W+S+I+A+A HG AAL+ ++EM VKP +TFL +L ACSH G D
Sbjct: 421 -RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRE 479
Query: 310 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M+ +G+E ++HY+C++D+L RAG L E
Sbjct: 480 LLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKE 512
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 116/278 (41%), Gaps = 49/278 (17%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + + S T + T ++ ++A+ F + + +D +V S VL
Sbjct: 310 AWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQA-GVEIDANVVSAVLGVSF 368
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
LG +H+ K F N F+ + LIN+Y C LT ++ +F +P RN V WN+
Sbjct: 369 IDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNS 428
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
MI AA A G A+ LY M LE+
Sbjct: 429 MI---------------------------------AAFARHGHG-LAALKLYEEMTTLEV 454
Query: 182 KPRLITLLALLPACVNVAA-------LNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG 234
KP +T L+LL AC +V LN +KE+HG I P + + +I+ GR G
Sbjct: 455 KPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHG------IEPRTEHYTCIIDMLGRAG 508
Query: 235 CLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAA 272
L +++ F + D +W +L+ A + HG+ +
Sbjct: 509 LLKEAKS-FIDSLPLKPDCKIWQALLGACSFHGDTEVG 545
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 22/279 (7%)
Query: 79 SSFLSNPFIASALINLYGH---------CL--SLTSARHLFDEIP---HRNE-VVWNAMI 123
S+FL N S L+++ G CL S+ F+ + HRN VVWN+++
Sbjct: 38 STFLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLL 97
Query: 124 SLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKP 183
SLYA L A++LF M P + I+ +N L +RML
Sbjct: 98 SLYAKC-GKLVDAIKLFDEM--PMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFD 154
Query: 184 RLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVF 243
TL +L C + K IH I + +G+ LI +Y +CGC V+ R VF
Sbjct: 155 H-ATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213
Query: 244 WKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGF 303
M ++V+ +++IS + + L F M V P+ +T+L L ACS +
Sbjct: 214 DGMS--HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 304 ADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ + + YG+E+ S L+D+ S+ G + +
Sbjct: 272 IVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIED 309
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 142/259 (54%), Gaps = 13/259 (5%)
Query: 89 SALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPP- 147
+ +I+ Y ++ AR LFD++P R+ + WN ++ YA+ D + A +F D+P
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGD-MEACERVFD--DMPER 150
Query: 148 NESTFNPIIAALAAQNDGAFKAIALYRRML-ELELKPRLITLLALLPACVNVAALNLIKE 206
N ++N +I A QN + + ++RM+ E + P T+ +L AC + A + K
Sbjct: 151 NVFSWNGLIKGYA-QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 207 IHGYGIR---NDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAY 263
+H YG N + + + LI+ YG+CG + + VF ++ +D++ W+++I+
Sbjct: 210 VHKYGETLGYNKV--DVNVKNALIDMYGKCGAIEIAMEVFKGIKR--RDLISWNTMINGL 265
Query: 264 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 323
A HG AL F EM+ +G+ PD +TF+GVL AC H G +D L YF M D+ +
Sbjct: 266 AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPE 325
Query: 324 SDHYSCLVDVLSRAGRLHE 342
+H C+VD+LSRAG L +
Sbjct: 326 IEHCGCVVDLLSRAGFLTQ 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ LI + R + L F + ++ + +LVL +C L G +H +
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 77 AKSSFLS-NPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMIS-LYAHSPDSLP 134
+ + + +ALI++YG C ++ A +F I R+ + WN MI+ L AH +
Sbjct: 215 ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT-- 272
Query: 135 AALELFHLMD---VPPNESTFNPIIAA 158
AL LFH M + P++ TF ++ A
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCA 299
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 180/371 (48%), Gaps = 34/371 (9%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A S + T ++ +T +I + + +F + + ++ + +++ K+C
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
R G+ IH ++ + F+ ++L+++Y + A+ +F + +++ V WN+
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 122 MIS-------------LYAHSPDS-----------------LPAALELFHLMDVPPNEST 151
+I+ L+ P + +ELF +M N T
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDN-IT 405
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
+ +I+A + N +A+ + +ML+ E+ P T ++L A ++A L +IHG
Sbjct: 406 WTAMISAFVS-NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRV 464
Query: 212 IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA 271
++ +IV + + L+ Y +CG ++ +F + + ++V ++++IS Y+ +G K
Sbjct: 465 VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE--PNIVSYNTMISGYSYNGFGKK 522
Query: 272 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 331
AL+ F +E +G +P+G+TFL +L AC H G+ D YF M+ Y +E DHY+C+V
Sbjct: 523 ALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMV 582
Query: 332 DVLSRAGRLHE 342
D+L R+G L +
Sbjct: 583 DLLGRSGLLDD 593
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 76/260 (29%)
Query: 89 SALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPN 148
S++++ Y + AR LFD + RN + W AMI
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMI------------------------- 246
Query: 149 ESTFNPIIAALAAQNDGAFKA------IALYRRM-LELELKPRLITLLALLPACVNVAAL 201
DG FKA L+ RM E ++K TL + AC +
Sbjct: 247 ---------------DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRY 291
Query: 202 NLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLIS 261
+IHG R + LG+ L+ Y + G + ++ VF M+ +KD V W+SLI+
Sbjct: 292 REGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK--NKDSVSWNSLIT 349
Query: 262 AYALHGEAKAALETFKEM-------------------------EMAGVKP--DGITFLGV 294
+ A E F++M E+ G+ P D IT+ +
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAM 409
Query: 295 LKACSHAGFADDALCYFTRM 314
+ A G+ ++ALC+F +M
Sbjct: 410 ISAFVSNGYYEEALCWFHKM 429
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 155/326 (47%), Gaps = 37/326 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I+S+ +++ +L F + + F+ +L L +G +H A
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQ-CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
++ S + ++L+++Y C A +F +P R V W A+IS Y L A
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK--GLHGA 435
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
+ L+ +M L+ T +L A
Sbjct: 436 --------------------------------GLKLFTKMRGSNLRADQSTFATVLKASA 463
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
+ A+L L K++H + IR+ + + GSGL++ Y +CG + ++ VF +M D ++ V W
Sbjct: 464 SFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD--RNAVSW 521
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
++LISA+A +G+ +AA+ F +M +G++PD ++ LGVL ACSH GF + YF M
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 581
Query: 317 DYGVEASSDHYSCLVDVLSRAGRLHE 342
YG+ HY+C++D+L R GR E
Sbjct: 582 IYGITPKKKHYACMLDLLGRNGRFAE 607
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
Query: 51 HVFSLVLKSCTALRRP----FLGAS-IHAHAAKSSFLSNPFIASALINLYGHCLSLTSAR 105
V S L + LR+P FL + A K+ F ++ ++ ++ +++AR
Sbjct: 9 EVRSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAAR 68
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG 165
++DE+PH+N V N MIS + + D + +A +LF M P I+ A+N
Sbjct: 69 KVYDEMPHKNTVSTNTMISGHVKTGD-VSSARDLFDAM--PDRTVVTWTILMGWYARNSH 125
Query: 166 AFKAIALYRRMLELE--LKPRLITLLALLPACVNVAALNLIKEIHGYGIR--NDIVPHPQ 221
+A L+R+M P +T LLP C + N + ++H + ++ D P
Sbjct: 126 FDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLT 185
Query: 222 LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM 281
+ + L+++Y L + +F ++ + KD V +++LI+ Y G ++ F +M
Sbjct: 186 VSNVLLKSYCEVRRLDLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHLFLKMRQ 243
Query: 282 AGVKPDGITFLGVLKA 297
+G +P TF GVLKA
Sbjct: 244 SGHQPSDFTFSGVLKA 259
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 126/287 (43%), Gaps = 43/287 (14%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHI--HSTLTLPLDPHVFSLVLKSCTALRRPFLGAS 71
++ +T L+ + S D+A +F + S+ TLP D F+ +L C
Sbjct: 110 VVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP-DHVTFTTLLPGCNDAVPQNAVGQ 168
Query: 72 IHAHAAKSSFLSNPF--IASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
+HA A K F +NPF +++ L+ Y L A LF+EIP ++ V +N +I+ Y
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGY--- 225
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF-KAIALYRRMLELELKPRLITL 188
+ DG + ++I L+ +M + +P T
Sbjct: 226 --------------------------------EKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+L A V + L +++H + +G+ +++ Y + ++ +R +F +M +
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 295
+ D V ++ +IS+Y+ + +A+L F+EM+ G F +L
Sbjct: 314 L--DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 167/335 (49%), Gaps = 8/335 (2%)
Query: 10 THSRLLYFTKLITSHVNQSRHDQALTVF-HHIHSTLTLPLDPHVFSLVLKSCTALRRPFL 68
H + +I S + A+++F + S+ ++ + V K+ L +
Sbjct: 85 NHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARD 144
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G +H K + FI + ++++Y C L A +F + + V WN+MI +A
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK-AIALYRRMLELELKPRLIT 187
+ A LF M N ++N +I+ +G FK A+ ++R M E ++KP T
Sbjct: 205 C-GLIDQAQNLFDEMP-QRNGVSWNSMISGFV--RNGRFKDALDMFREMQEKDVKPDGFT 260
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
+++LL AC + A + IH Y +RN + + + LI+ Y +CGC+ NVF
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP 320
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 307
K + W+S+I A +G + A++ F E+E +G++PD ++F+GVL AC+H+G A
Sbjct: 321 K--KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 308 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+F M+ Y +E S HY+ +V+VL AG L E
Sbjct: 379 DEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEE 413
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 30/300 (10%)
Query: 55 LVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLS---LTSARHLFDEI 111
L+ C+ +R IHA K+ +S+ AS ++ C S + A +F I
Sbjct: 30 LIDTQCSTMREL---KQIHASLIKTGLISDTVTASRVLAFC--CASPSDMNYAYLVFTRI 84
Query: 112 PHRNEVVWNAMISLYAHSPDSLPA-ALELFHLM-----DVPPNESTFNPIIAA---LAAQ 162
H+N VWN +I ++ S S P A+ +F M V P T+ + A L
Sbjct: 85 NHKNPFVWNTIIRGFSRS--SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQA 142
Query: 163 NDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQL 222
DG + + LE + R L + + A + + G+ D+V
Sbjct: 143 RDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF----DVVAW--- 195
Query: 223 GSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMA 282
+ +I + +CG + ++N+F +M ++ V W+S+IS + +G K AL+ F+EM+
Sbjct: 196 -NSMIMGFAKCGLIDQAQNLFDEMP--QRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 283 GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
VKPDG T + +L AC++ G ++ + R+ E +S + L+D+ + G + E
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNR-FELNSIVVTALIDMYCKCGCIEE 311
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 153/327 (46%), Gaps = 39/327 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L + I++ V R +A+ F P + F L +C+ LG +H
Sbjct: 174 LETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP-NSITFCAFLNACSDWLHLNLGMQLH 232
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+S F ++ + + LI+ YG C + S+ +F E+ +N V W ++++ Y
Sbjct: 233 GLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYV------ 286
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
QN KA LY R + ++ + ++L
Sbjct: 287 ----------------------------QNHEDEKASVLYLRSRKDIVETSDFMISSVLS 318
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC +A L L + IH + ++ + +GS L++ YG+CGC+ +S F +M + K++
Sbjct: 319 ACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE--KNL 376
Query: 254 VVWSSLISAYALHGEAKAALETFKEM--EMAGVKPDGITFLGVLKACSHAGFADDALCYF 311
V +SLI YA G+ AL F+EM G P+ +TF+ +L ACS AG ++ + F
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIF 436
Query: 312 TRMQRDYGVEASSDHYSCLVDVLSRAG 338
M+ YG+E ++HYSC+VD+L RAG
Sbjct: 437 DSMRSTYGIEPGAEHYSCIVDMLGRAG 463
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 121/291 (41%), Gaps = 39/291 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T LI+ AL F + +P D F K+ +LR P G IH
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPND-FTFPCAFKAVASLRLPVTGKQIH 131
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
A A K + + F+ + ++Y AR LFDEIP RN WNA IS
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS--------- 182
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
+ D P E A +A +RR ++ P IT A L
Sbjct: 183 ------NSVTDGRPRE----------------AIEAFIEFRR---IDGHPNSITFCAFLN 217
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC + LNL ++HG +R+ + +GLI+ YG+C + +S +F +M K+
Sbjct: 218 ACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG--TKNA 275
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 304
V W SL++AY + E + A + V+ VL AC AG A
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMA 324
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 151/298 (50%), Gaps = 29/298 (9%)
Query: 60 CTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVW 119
C L H A K L++ + +AL+++YG C ++ + +F+E+ ++ V W
Sbjct: 121 CAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSW 180
Query: 120 NAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL 179
++ + L E+FH M P + ++ A + R +LEL
Sbjct: 181 TVVLDTVV-KWEGLERGREVFHEM--PERNAVAWTVMVA-------GYLGAGFTREVLEL 230
Query: 180 --ELKPR------LITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQ-------LGS 224
E+ R +TL ++L AC L + + +H Y ++ +++ + +G+
Sbjct: 231 LAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGT 290
Query: 225 GLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGV 284
L++ Y +CG + +S NVF MR ++VV W++L S A+HG+ + ++ F +M + V
Sbjct: 291 ALVDMYAKCGNIDSSMNVFRLMRK--RNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREV 347
Query: 285 KPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
KPD +TF VL ACSH+G D+ F + R YG+E DHY+C+VD+L RAG + E
Sbjct: 348 KPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEE 404
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 166/339 (48%), Gaps = 44/339 (12%)
Query: 6 YYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
+ S L+ + L++ + + +AL VF ++ + + S V+K+C +L+
Sbjct: 142 FESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE-RVEISEFTLSSVVKTCASLKI 200
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
G +HA + + + R L V+ AMIS
Sbjct: 201 LQQGKQVHA------------------------MVVVTGRDLV--------VLGTAMISF 228
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
Y+ S + A+++++ ++V +E N +I+ +N +A L R +P +
Sbjct: 229 YS-SVGLINEAMKVYNSLNVHTDEVMLNSLISG-CIRNRNYKEAFLLMSRQ-----RPNV 281
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
L + L C + + L + K+IH +RN V +L +GL++ YG+CG +V +R +F
Sbjct: 282 RVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRA 341
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEM--EMAGVKPDGITFLGVLKACSHAGF 303
+ K VV W+S+I AYA++G+ ALE F+EM E +GV P+ +TFL V+ AC+HAG
Sbjct: 342 IPS--KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGL 399
Query: 304 ADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ F M+ Y + ++HY C +D+LS+AG E
Sbjct: 400 VKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEE 438
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 43/235 (18%)
Query: 31 DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASA 90
+ L +F IH + L H F+ VL +C+ L P G +HA K + +A
Sbjct: 66 NDTLALFLQIHRA-SPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTA 124
Query: 91 LINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNES 150
LI++Y L + +F+ + ++ V WNA++S + + AL +F
Sbjct: 125 LIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKG-KEALGVFA--------- 174
Query: 151 TFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGY 210
A+YR +E+ TL +++ C ++ L K++H
Sbjct: 175 --------------------AMYRERVEIS----EFTLSSVVKTCASLKILQQGKQVHAM 210
Query: 211 GI---RNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISA 262
+ R+ +V LG+ +I Y G L+N + ++ D V+ +SLIS
Sbjct: 211 VVVTGRDLVV----LGTAMISFYSSVG-LINEAMKVYNSLNVHTDEVMLNSLISG 260
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 143/292 (48%), Gaps = 39/292 (13%)
Query: 52 VFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEI 111
F +LK+C + G I K F + ++ + LI+LYG C + AR +FDE+
Sbjct: 115 TFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM 174
Query: 112 PHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIA 171
RN V WN+ I+ AL +N
Sbjct: 175 TERNVVSWNS---------------------------------IMTALV-ENGKLNLVFE 200
Query: 172 LYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYG 231
+ M+ P T++ LL AC L+L K +H + ++ + +LG+ L++ Y
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYA 258
Query: 232 RCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETF-KEMEMAGVKPDGIT 290
+ G L +R VF +M +DK+V WS++I A +G A+ AL+ F K M+ + V+P+ +T
Sbjct: 259 KSGGLEYARLVFERM--VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVT 316
Query: 291 FLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
FLGVL ACSH G DD YF M++ + ++ HY +VD+L RAGRL+E
Sbjct: 317 FLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNE 368
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 40/287 (13%)
Query: 55 LVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR 114
+ LK C++++ IH SS ++ FI S L+ + SL+ A+ L
Sbjct: 18 IFLKLCSSIKHLL---QIHGQIHLSSLQNDSFIISELVRVS----SLSLAKDL------- 63
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYR 174
+L HS DS P ST+N +++ + +D ++I +Y
Sbjct: 64 -----AFARTLLLHSSDSTP---------------STWN-MLSRGYSSSDSPVESIWVYS 102
Query: 175 RMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG 234
M +KP +T LL AC + L ++I +++ +G+ LI YG C
Sbjct: 103 EMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCK 162
Query: 235 CLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGV 294
++R VF +M +++VV W+S+++A +G+ E F EM PD T + +
Sbjct: 163 KTSDARKVFDEM--TERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVL 220
Query: 295 LKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
L AC + L + M R+ +E + + LVD+ +++G L
Sbjct: 221 LSACG-GNLSLGKLVHSQVMVRE--LELNCRLGTALVDMYAKSGGLE 264
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 152/301 (50%), Gaps = 26/301 (8%)
Query: 51 HVFSLVLKSC--TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
+ FS LKSC T L++ +H+ + + N ++ S+L+ Y + A L
Sbjct: 417 YTFSTALKSCCVTELQQ------LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLL 470
Query: 109 DEIPHRNEVV-WNAMISLYA-----HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQ 162
D VV N + +Y+ H L + LE P+ ++N IAA ++
Sbjct: 471 DWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-------QPDTVSWNIAIAA-CSR 522
Query: 163 NDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI-VPHPQ 221
+D + I L++ ML+ ++P T +++L C + L L IHG + D
Sbjct: 523 SDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTF 582
Query: 222 LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM 281
+ + LI+ YG+CG + + VF + R+ K+++ W++LIS +HG + ALE FKE
Sbjct: 583 VCNVLIDMYGKCGSIRSVMKVFEETRE--KNLITWTALISCLGIHGYGQEALEKFKETLS 640
Query: 282 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
G KPD ++F+ +L AC H G + + F +M +DYGVE DHY C VD+L+R G L
Sbjct: 641 LGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLK 699
Query: 342 E 342
E
Sbjct: 700 E 700
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRN 115
VLK + ++ + +H A K + ++LI+ YG C + A +F + +
Sbjct: 221 VLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWD 280
Query: 116 EVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRR 175
V WNA+I A S NP+ KA+ L+
Sbjct: 281 IVSWNAIICATAKSE----------------------NPL------------KALKLFVS 306
Query: 176 MLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGC 235
M E P T +++L V L+ ++IHG I+N LG+ LI+ Y +CG
Sbjct: 307 MPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGN 366
Query: 236 LVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 295
L +SR F +R DK++V W++L+S YA + + L F +M G +P TF L
Sbjct: 367 LEDSRLCFDYIR--DKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTAL 423
Query: 296 KAC 298
K+C
Sbjct: 424 KSC 426
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Query: 30 HDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSF-LSNPFIA 88
H++ + +F H+ + P D + F +L C+ L LG+SIH K+ F ++ F+
Sbjct: 526 HEEVIELFKHMLQSNIRP-DKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVC 584
Query: 89 SALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMIS---LYAHSPDSLPAALELFHLMDV 145
+ LI++YG C S+ S +F+E +N + W A+IS ++ + ++L E L
Sbjct: 585 NVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSL-GF 643
Query: 146 PPNESTFNPIIAALAAQNDGAFK-AIALYRRMLELELKPRL 185
P+ +F I+ A ++ G K + L+++M + ++P +
Sbjct: 644 KPDRVSFISILT--ACRHGGMVKEGMGLFQKMKDYGVEPEM 682
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 115/297 (38%), Gaps = 57/297 (19%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G IH K+ + + +ALI+ Y C +L +R FD I +N V WNA++S YA+
Sbjct: 335 GRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN 394
Query: 129 --SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQ--------------NDGAFKAIAL 172
P L L++ M P E TF+ + + D + +L
Sbjct: 395 KDGPICLSLFLQMLQ-MGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSL 453
Query: 173 YRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGR 232
R + +L + LL +V LN++ I Y R +L S L +
Sbjct: 454 MRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI--YSRRGQYHESVKLISTLEQP--- 508
Query: 233 CGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 292
D V W+ I+A + + +E FK M + ++PD TF+
Sbjct: 509 -------------------DTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFV 549
Query: 293 GVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSC--------LVDVLSRAGRLH 341
+L CS LC T +G+ +D +SC L+D+ + G +
Sbjct: 550 SILSLCSK-------LCDLTLGSSIHGLITKTD-FSCADTFVCNVLIDMYGKCGSIR 598
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 164/301 (54%), Gaps = 10/301 (3%)
Query: 46 LPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFL---SNPFIASALINLYGHCLSLT 102
+ LD +LK C ++ +H ++ K+ L P + +AL++ Y C ++
Sbjct: 428 ITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVE 487
Query: 103 SARHLFDEIPHRNEVV-WNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAA 161
A +F + R +V +N+++S Y +S A + LF ++ + T ++ + A
Sbjct: 488 YAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQM-LF--TEMSTTDLTTWSLMVRIYA 544
Query: 162 QNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQ 221
++ +AI ++R + ++P +T++ LLP C +A+L+L+++ HGY IR + +
Sbjct: 545 ESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIR 603
Query: 222 LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM 281
L L++ Y +CG L ++ +VF D +D+V+++++++ YA+HG K AL + M
Sbjct: 604 LKGTLLDVYAKCGSLKHAYSVF--QSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTE 661
Query: 282 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
+ +KPD + +L AC HAG D L + ++ +G++ + + Y+C VD+++R GRL
Sbjct: 662 SNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLD 721
Query: 342 E 342
+
Sbjct: 722 D 722
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 132/333 (39%), Gaps = 68/333 (20%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A+S + L+ + +I + + +A +FH++ + D +L C
Sbjct: 282 AASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Query: 62 ALRRPFLGASIHAHAAKSSFL-SNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
L G IH++ + S+L + + +ALI+ Y ++A F + ++ + WN
Sbjct: 342 QLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWN 401
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE 180
A++ +A SP F + + +
Sbjct: 402 AILDAFADSPKQFQ--------------------------------FLNLLHHLLNEAIT 429
Query: 181 LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIV---PHPQLGSGLIEAYGRCGCLV 237
L +T+L+LL C+NV + +KE+HGY ++ ++ P+LG+ L++AY +CG +
Sbjct: 430 LDS--VTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVE 487
Query: 238 NSRNVFWKMRDM------------------------------DKDVVVWSSLISAYALHG 267
+ +F + + D+ WS ++ YA
Sbjct: 488 YAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESC 547
Query: 268 EAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
A+ F+E++ G++P+ +T + +L C+
Sbjct: 548 CPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQ 580
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 118/301 (39%), Gaps = 46/301 (15%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D VF V+K+C ++ G ++H K ++ ++ +++N+Y C + + +F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 109 DEIPHRNEVVWNAMIS-LYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
++ + VVWN +++ L + H D P
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEP--------------------- 118
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
KP +T +LP CV + K +H Y I+ + +G+ L+
Sbjct: 119 --------------KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALV 164
Query: 228 EAYGRCGCLV-NSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
Y + G + ++ F + DKDVV W+++I+ ++ + A +F M +P
Sbjct: 165 SMYAKFGFIFPDAYTAFDGI--ADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEP 222
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS---SDHYSC--LVDVLSRAGRLH 341
+ T VL C A + C R Y V+ S + + C LV R GR+
Sbjct: 223 NYATIANVLPVC--ASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIE 280
Query: 342 E 342
E
Sbjct: 281 E 281
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 166/325 (51%), Gaps = 7/325 (2%)
Query: 21 ITSHVNQSRHD-QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+ S NQ +D +AL +F + L D + VL +C L + +G IH+H +
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVV--WNAMISLYAHSPDSLPAAL 137
F + + +ALI++Y C + +AR L ++ ++ + + A++ Y D A
Sbjct: 309 GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 138 ELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVN 197
L D + + +I Q+ +AI L+R M+ +P TL A+L +
Sbjct: 369 IFVSLKD--RDVVAWTAMIVGYE-QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 425
Query: 198 VAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWS 257
+A+L+ K+IHG +++ + + + LI Y + G + ++ F +R ++D V W+
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR-CERDTVSWT 484
Query: 258 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 317
S+I A A HG A+ ALE F+ M M G++PD IT++GV AC+HAG + YF M+
Sbjct: 485 SMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 544
Query: 318 YGVEASSDHYSCLVDVLSRAGRLHE 342
+ + HY+C+VD+ RAG L E
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQE 569
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 131/277 (47%), Gaps = 19/277 (6%)
Query: 50 PHVFSLVLKSCTALRRP--------FLGASIHAHAAKSSFLSNPFIASALINLYGHCLSL 101
P S +L+ CT L + F +H KS + + ++ + L+N+Y
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 102 TSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAA 161
AR LFDE+P R WN ++S Y+ D + + E F D P + + +
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGD-MDSTCEFF---DQLPQRDSVSWTTMIVGY 121
Query: 162 QNDGAF-KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHP 220
+N G + KAI + M++ ++P TL +L + + K++H + ++ + +
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNV 181
Query: 221 QLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEME 280
+ + L+ Y +CG + ++ VF +M + +D+ W+++I+ + G+ A+ F++M
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRM--VVRDISSWNAMIALHMQVGQMDLAMAQFEQM- 238
Query: 281 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 317
+ D +T+ ++ + G+ AL F++M RD
Sbjct: 239 ---AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 50/273 (18%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + + S ++ +T +I + + +A+ +F + P + + + +L +
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP-NSYTLAAMLSVAS 424
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP-HRNEVVWN 120
+L G IH A KS + + +++ALI +Y ++TSA FD I R+ V W
Sbjct: 425 SLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWT 484
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE 180
+MI ALA Q+ A +A+ L+ ML
Sbjct: 485 SMI---------------------------------IALA-QHGHAEEALELFETMLMEG 510
Query: 181 LKPRLITLLALLPACVNVAALN-------LIKEIHGYGIRNDIVPHPQLGSGLIEAYGRC 233
L+P IT + + AC + +N ++K++ + I+P + +++ +GR
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV------DKIIPTLSHYACMVDLFGRA 564
Query: 234 GCLVNSRNVFWKMRDMDKDVVVWSSLISAYALH 266
G L ++ KM ++ DVV W SL+SA +H
Sbjct: 565 GLLQEAQEFIEKM-PIEPDVVTWGSLLSACRVH 596
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 37/265 (13%)
Query: 78 KSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAAL 137
K FL + I +A++ +Y + SAR +F+ +P+ + + WN +IS YA
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA---------- 426
Query: 138 ELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL-ELKPRLITLLALLPACV 196
QN A +AI +Y M E E+ T +++LPAC
Sbjct: 427 ------------------------QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
AL ++HG ++N + + + L + YG+CG L ++ ++F+++ ++ V W
Sbjct: 463 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS--VPW 520
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
++LI+ + HG + A+ FKEM GVKPD ITF+ +L ACSH+G D+ F MQ
Sbjct: 521 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 580
Query: 317 DYGVEASSDHYSCLVDVLSRAGRLH 341
DYG+ S HY C+VD+ RAG+L
Sbjct: 581 DYGITPSLKHYGCMVDMYGRAGQLE 605
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 53/295 (17%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+I+ + + + F + L D F VLK+C R G IH A K
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKF 179
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
F+ + ++A++LI+LY ++ +AR LFDE+P R+ WNAMIS Y S ++ A
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL--- 236
Query: 140 FHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVA 199
T + + A+ + +T+++LL AC
Sbjct: 237 -----------TLSNGLRAMDS------------------------VTVVSLLSACTEAG 261
Query: 200 ALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSL 259
N IH Y I++ + + + LI+ Y G L + + VF +M +D++ W+S+
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM--YVRDLISWNSI 319
Query: 260 ISAYALHGEAKAALETFKEMEMAGVKPDGITF---------LGVLKAC-SHAGFA 304
I AY L+ + A+ F+EM ++ ++PD +T LG ++AC S GF
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT 374
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 50/289 (17%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRN 115
+ + CT L+ +HA S + N I++ L+NLY + ++ ARH FD I +R+
Sbjct: 60 LFRYCTNLQSA---KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 116 EVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRR 175
WN MIS Y + +S + F L
Sbjct: 117 VYAWNLMISGYGRAGNS-SEVIRCFSLF-------------------------------- 143
Query: 176 MLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGC 235
ML L P T ++L AC V N +IH ++ + + + LI Y R
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGN---KIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 236 LVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 293
+ N+R +F +M RDM W+++IS Y G AK AL + D +T +
Sbjct: 201 VGNARILFDEMPVRDMGS----WNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVS 252
Query: 294 VLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+L AC+ AG + + + + +G+E+ + L+D+ + GRL +
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGRLRD 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 57/283 (20%)
Query: 11 HSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT---ALRRPF 67
++ ++ + +I+ + +A+ +++ + + + + VL +C+ ALR+
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ-- 469
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
G +H K+ + F+ ++L ++YG C L A LF +IP N V WN +I+ +
Sbjct: 470 -GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
FH KA+ L++ ML+ +KP IT
Sbjct: 529 ------------FH----------------------GHGEKAVMLFKEMLDEGVKPDHIT 554
Query: 188 LLALLPACVNVAALN-------LIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
+ LL AC + ++ +++ +G I P + +++ YGR G L +
Sbjct: 555 FVTLLSACSHSGLVDEGQWCFEMMQTDYG------ITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 241 NVFWKMRDMDKDVVVWSSLISAYALHGE---AKAALETFKEME 280
F K + D +W +L+SA +HG K A E E+E
Sbjct: 609 K-FIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 156/328 (47%), Gaps = 39/328 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I+ + +ALTVF + + P + F+ VL SC LG IH
Sbjct: 121 WTAMISRYSQTGHSSEALTVFAEMMRSDGKP-NEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K ++ S+ F+ S+L+++Y + AR +F+ +P R+ V A+I+ YA A
Sbjct: 180 VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD-EEA 238
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
LE+FH R+ + P +T +LL A
Sbjct: 239 LEMFH---------------------------------RLHSEGMSPNYVTYASLLTALS 265
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
+A L+ K+ H + +R ++ + L + LI+ Y +CG L +R +F M + + + W
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPE--RTAISW 323
Query: 257 SSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM- 314
++++ Y+ HG + LE F+ M + VKPD +T L VL CSH D L F M
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 315 QRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+YG + ++HY C+VD+L RAGR+ E
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 135/297 (45%), Gaps = 51/297 (17%)
Query: 51 HVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDE 110
H + +L +C R G +HAH K+ +L ++ + L+ YG C L AR + DE
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 111 IPHRNEVVWNAMISLYA---HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
+P +N V W AMIS Y+ HS ++L E+ D PNE TF +
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR-SDGKPNEFTFATV------------ 159
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
L +C+ + L L K+IHG ++ + H +GS L+
Sbjct: 160 ------------------------LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLL 195
Query: 228 EAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
+ Y + G + +R +F + ++DVV +++I+ YA G + ALE F + G+ P+
Sbjct: 196 DMYAKAGQIKEAREIFECLP--ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPN 253
Query: 288 GITFLGVLKACSHAGFAD---DALCYFTRMQRD-YGVEASSDHYSCLVDVLSRAGRL 340
+T+ +L A S D A C+ R + Y V +S L+D+ S+ G L
Sbjct: 254 YVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS-----LIDMYSKCGNL 305
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
ALL AC++ AL + +H + I+ +P L + L+ YG+C CL ++R V +M +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE- 115
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA---GFADD 306
K+VV W+++IS Y+ G + AL F EM + KP+ TF VL +C A G
Sbjct: 116 -KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 307 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ D + S L+D+ ++AG++ E
Sbjct: 175 IHGLIVKWNYDSHIFVGSS----LLDMYAKAGQIKE 206
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 163/327 (49%), Gaps = 39/327 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR-PFLGASIHAH 75
+T +I+ V ++ + +F + P + S VL +C L L IH
Sbjct: 219 WTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS-VLPACVELNYGSSLVKEIHGF 277
Query: 76 AAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPA 135
+ + ++ + +A + +Y C +++ +R LF+ R+ V+W++MIS YA + D
Sbjct: 278 SFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGD---- 333
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
E+ +L++ +M + ++ +TLLA++ AC
Sbjct: 334 CSEVMNLLN------------------------------QMRKEGIEANSVTLLAIVSAC 363
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
N L+ +H ++ + H LG+ LI+ Y +CG L +R VF+++ +KD+V
Sbjct: 364 TNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYEL--TEKDLVS 421
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 315
WSS+I+AY LHG ALE FK M G + D + FL +L AC+HAG ++A FT+
Sbjct: 422 WSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAG 481
Query: 316 RDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ Y + + +HY+C +++L R G++ +
Sbjct: 482 K-YHMPVTLEHYACYINLLGRFGKIDD 507
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 40/327 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +IT + +AL F S + + + + VL S + LG IH
Sbjct: 175 WTGIITGFTRTGLYKEALDTF----SKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLI 230
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K + L + +ALI++Y C L+ A +F E+ +++V WN+MIS H S A
Sbjct: 231 LKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERS-KEA 289
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
++LF LM +KP L ++L AC
Sbjct: 290 IDLFSLMQTSSG--------------------------------IKPDGHILTSVLSACA 317
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
++ A++ + +H Y + I +G+ +++ Y +CG + + +F +R K+V W
Sbjct: 318 SLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS--KNVFTW 375
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ- 315
++L+ A+HG +L F+EM G KP+ +TFL L AC H G D+ YF +M+
Sbjct: 376 NALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKS 435
Query: 316 RDYGVEASSDHYSCLVDVLSRAGRLHE 342
R+Y + +HY C++D+L RAG L E
Sbjct: 436 REYNLFPKLEHYGCMIDLLCRAGLLDE 462
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 49/298 (16%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D F V K+C G IH K F + ++ ++L++ YG C +A +F
Sbjct: 105 DMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVF 164
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
E+P R+ V W +I+ + + AL+ F MDV PN
Sbjct: 165 GEMPVRDVVSWTGIITGFTRT-GLYKEALDTFSKMDVEPN-------------------- 203
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
L T + +L + V L+L K IHG ++ + + G+ LI+
Sbjct: 204 ----------------LATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM-AGVKPD 287
Y +C L ++ VF ++ DK V W+S+IS +K A++ F M+ +G+KPD
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDK--VSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 288 GITFLGVLKACSHAGFADDALCYFTRMQRDY----GVEASSDHYSCLVDVLSRAGRLH 341
G VL AC+ G D R +Y G++ + + +VD+ ++ G +
Sbjct: 306 GHILTSVLSACASLGAVDHG-----RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 10/218 (4%)
Query: 89 SALINLYGHCLSLTSARHLFDEIPHRN----EVVWNAMISLYAHSPDSLPAALELFHLMD 144
S L+ L C SL + + ++ R+ +++ N +++ S D + + H +
Sbjct: 7 SVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIR 66
Query: 145 VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLI 204
+ ++N ++++ A D I Y+ + P + T + AC + +
Sbjct: 67 SVLSSFSYNTLLSSYAV-CDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 205 KEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYA 264
K+IHG + + + L+ YG CG N+ VF +M +DVV W+ +I+ +
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMP--VRDVVSWTGIITGFT 183
Query: 265 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
G K AL+TF +M+ V+P+ T++ VL + G
Sbjct: 184 RTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVG 218
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 156/337 (46%), Gaps = 44/337 (13%)
Query: 6 YYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
+ T ++ + ++ V+ R+D+AL +FH + + V SL L+ C +
Sbjct: 285 FDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSL-LRVCKFFEQ 343
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
P SIH + + SN S+LI+ Y C + A + D + +++ V + MIS
Sbjct: 344 PLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISG 403
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
AH+ S A H+ D P
Sbjct: 404 LAHAGRSDEAISIFCHMRDTP-------------------------------------NA 426
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDI-VPHPQLGSGLIEAYGRCGCLVNSRNVFW 244
IT+++LL AC A L K HG IR + + +G+ +++AY +CG + +R F
Sbjct: 427 ITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFD 486
Query: 245 KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 304
++ +K+++ W+ +ISAYA++G AL F EM+ G P+ +T+L L AC+H G
Sbjct: 487 QI--TEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLV 544
Query: 305 DDALCYFTRM-QRDYGVEASSDHYSCLVDVLSRAGRL 340
L F M + D+ + S HYSC+VD+LSRAG +
Sbjct: 545 KKGLMIFKSMVEEDH--KPSLQHYSCIVDMLSRAGEI 579
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHH-IHSTLTLPLDPHVFSLVLKSCTALRRPFLGASI 72
++ ++ +I S+V L +F +H T P D + VLK+CT + +G S+
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEP-DCVTVTSVLKACTVMEDIDVGRSV 248
Query: 73 HAHAAKSSF-LSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
H + + F L++ F+ ++LI++Y + SA +FDE RN V WN++++ + H+
Sbjct: 249 HGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQ- 307
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
ALE+FHL M++ ++ +T+++L
Sbjct: 308 RYDEALEMFHL---------------------------------MVQEAVEVDEVTVVSL 334
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
L C K IHG IR + S LI+AY C + ++ V M K
Sbjct: 335 LRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSM--TYK 392
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
DVV S++IS A G + A+ F M P+ IT + +L ACS
Sbjct: 393 DVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACS 437
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 114/246 (46%), Gaps = 41/246 (16%)
Query: 55 LVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR 114
LV+ +C +L F G IH + +S F + ++++ +Y SL SAR LFDE+ R
Sbjct: 132 LVIHACRSLW--FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSER 188
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYR 174
+ + W+ +I Y S + P++ + L++
Sbjct: 189 DVISWSVVIRSYVQSKE----------------------PVVG------------LKLFK 214
Query: 175 RML-ELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI-VPHPQLGSGLIEAYGR 232
M+ E + +P +T+ ++L AC + +++ + +HG+ IR + + + LI+ Y +
Sbjct: 215 EMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSK 274
Query: 233 CGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 292
+ ++ VF +++V W+S+++ + + ALE F M V+ D +T +
Sbjct: 275 GFDVDSAFRVF--DETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVV 332
Query: 293 GVLKAC 298
+L+ C
Sbjct: 333 SLLRVC 338
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 102/252 (40%), Gaps = 59/252 (23%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
DP VF +V K+C L F G SI + Y C L S F
Sbjct: 44 DPFVFPIVFKACAKLSWLFQGNSIA-------------------DFYMKCGDLCSGLREF 84
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
D + R+ V WN ++ F L+D E +
Sbjct: 85 DCMNSRDSVSWNVIV----------------FGLLDYGFEE------------------E 110
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
+ + ++ +P TL+ ++ AC ++ ++IHGY IR+ + + ++
Sbjct: 111 GLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFDG--EKIHGYVIRSGFCGISSVQNSILC 168
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPD 287
Y L ++R +F +M + +DV+ WS +I +Y E L+ FKEM A +PD
Sbjct: 169 MYADSDSL-SARKLFDEMSE--RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPD 225
Query: 288 GITFLGVLKACS 299
+T VLKAC+
Sbjct: 226 CVTVTSVLKACT 237
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 136/294 (46%), Gaps = 37/294 (12%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
LDP + LK+C+ + LG IH A SS+ + + LI +Y C L A +
Sbjct: 278 LDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIV 337
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
F + + WN++IS YA L + E HL+
Sbjct: 338 FRQTEENSLCTWNSIISGYAQ----LNKSEEASHLL------------------------ 369
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVP-HPQLGSGL 226
R ML +P ITL ++LP C +A L KE H Y +R + L + L
Sbjct: 370 ------REMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
++ Y + G +V ++ V M +D V ++SLI Y GE AL FKEM +G+KP
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSK--RDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP 481
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
D +T + VL ACSH+ + F +MQ +YG+ H+SC+VD+ RAG L
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFL 535
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 18/334 (5%)
Query: 15 LYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHA 74
L + LI S+ ++ + + + S P D + VLK+C G +H
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRP-DAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLP 134
SS+ S+ ++ +ALI++Y ++ AR LFD + R+ V WNA+I+ YA S
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA-SEGMWS 227
Query: 135 AALELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
A ELF M V + T+N II+ Q A+ L RM + ++
Sbjct: 228 EAFELFDKMWFSGVEVSVITWN-IISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG 286
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
L AC + A+ L KEIHG I + + + LI Y +C L ++ VF + +
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE--EN 344
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDAL 308
+ W+S+IS YA +++ A +EM +AG +P+ IT +L C+ +
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 309 CYFTRMQ--RDYGVEASSDHYSCLVDVLSRAGRL 340
CY R + +DY + ++ LVDV +++G++
Sbjct: 405 CYILRRKCFKDYTM-----LWNSLVDVYAKSGKI 433
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 117 VVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRM 176
++WN+++ +YA S + AA ++ LM +E T+ +I Q +G A+AL++ M
Sbjct: 418 MLWNSLVDVYAKS-GKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGV-ALALFKEM 474
Query: 177 LELELKPRLITLLALLPAC-----VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYG 231
+KP +T++A+L AC V+ +K YGIR P Q S +++ YG
Sbjct: 475 TRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIR----PCLQHFSCMVDLYG 530
Query: 232 RCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGE---AKAALETFKEMEMAGVKPDG 288
R G L ++++ M W++L++A +HG K A E EM KP+
Sbjct: 531 RAGFLAKAKDIIHNM-PYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEM-----KPEN 584
Query: 289 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 321
+ ++ A + L + RD GV+
Sbjct: 585 PGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVK 617
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 165/332 (49%), Gaps = 39/332 (11%)
Query: 13 RLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASI 72
R+ + L +V ++L ++ + P D + V+K+ + L G ++
Sbjct: 73 RIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRP-DEFTYPFVVKAISQLGDFSCGFAL 131
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
HAH K F +A+ L+ +Y L+SA LF+ + ++ V WNA +++ + +S
Sbjct: 132 HAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNS 191
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
ALE F+ M A A Q D T++++L
Sbjct: 192 -AIALEYFNKM-------------CADAVQFDS--------------------FTVVSML 217
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
AC + +L + +EI+ + +I + + + ++ + +CG +R +F +M+ ++
Sbjct: 218 SACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQ--RN 275
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
VV WS++I YA++G+++ AL F M+ G++P+ +TFLGVL ACSHAG ++ YF+
Sbjct: 276 VVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFS 335
Query: 313 RM--QRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M D +E +HY+C+VD+L R+G L E
Sbjct: 336 LMVQSNDKNLEPRKEHYACMVDLLGRSGLLEE 367
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 148/311 (47%), Gaps = 37/311 (11%)
Query: 32 QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASAL 91
+A+ +F + T P D + VL C++ G IH + ++ + SAL
Sbjct: 534 EAIGLFSEMLDDGTSP-DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSAL 592
Query: 92 INLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNEST 151
+N+Y C SL AR ++D +P + V +++IS Y+
Sbjct: 593 VNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQ----------------------- 629
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
+ +I DG L+R M+ + ++L A +L ++H Y
Sbjct: 630 -HGLI------QDG----FLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYI 678
Query: 212 IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA 271
+ + P +GS L+ Y + G + + F ++ D++ W++LI++YA HG+A
Sbjct: 679 TKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING--PDLIAWTALIASYAQHGKANE 736
Query: 272 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 331
AL+ + M+ G KPD +TF+GVL ACSH G +++ + M +DYG+E + HY C+V
Sbjct: 737 ALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMV 796
Query: 332 DVLSRAGRLHE 342
D L R+GRL E
Sbjct: 797 DALGRSGRLRE 807
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 36/230 (15%)
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
LG +H + KS + + + S+L LY C SL + LF IP ++ W +MIS +
Sbjct: 468 LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF- 526
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
NE + +AI L+ ML+ P T
Sbjct: 527 --------------------NEYGY-------------LREAIGLFSEMLDDGTSPDEST 553
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
L A+L C + +L KEIHGY +R I LGS L+ Y +CG L +R V+ ++
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 297
++D V SSLIS Y+ HG + F++M M+G D +LKA
Sbjct: 614 ELDP--VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 10/221 (4%)
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE 180
A+IS+Y+ S D + + ++F +D ++ N +I + + Q+ KAI L+ RML+
Sbjct: 391 ALISMYSKSGD-IDLSEQVFEDLDDIQRQNIVNVMITSFS-QSKKPGKAIRLFTRMLQEG 448
Query: 181 LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
L+ ++ +LL + LNL K++HGY +++ +V +GS L Y +CG L S
Sbjct: 449 LRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESY 505
Query: 241 NVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC-S 299
+F + KD W+S+IS + +G + A+ F EM G PD T VL C S
Sbjct: 506 KLFQGIP--FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSS 563
Query: 300 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
H + ++ G++ D S LV++ S+ G L
Sbjct: 564 HPSLPRGKEIHGYTLRA--GIDKGMDLGSALVNMYSKCGSL 602
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 44/284 (15%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+I+ + +++L F +H L + + V+ +C+AL+ P + H K
Sbjct: 121 MISGYKQHRLFEESLRFFSKMH-FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKM 179
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
+ + SALI+++ L A +F + N WN +I+
Sbjct: 180 GYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIA--------------- 224
Query: 140 FHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVA 199
AL QN GA L+ M KP T ++L AC ++
Sbjct: 225 -----------------GALRNQNYGA--VFDLFHEMCVGFQKPDSYTYSSVLAACASLE 265
Query: 200 ALNLIKEIHGYGIR---NDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
L K + I+ D+ + + +++ Y +CG + + VF ++ + VV W
Sbjct: 266 KLRFGKVVQARVIKCGAEDVF----VCTAIVDLYAKCGHMAEAMEVFSRIPN--PSVVSW 319
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
+ ++S Y +A +ALE FKEM +GV+ + T V+ AC
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 37/297 (12%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLY--GHCLSLTSAR 105
LD V+ +C+ + L SIH+ K F + + L++ Y G + AR
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVAR 240
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG 165
+FD+I ++ V +N+++S+YA S S A E+F + V TFN I
Sbjct: 241 KIFDQIVDKDRVSYNSIMSVYAQSGMS-NEAFEVFRRL-VKNKVVTFNAI---------- 288
Query: 166 AFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG 225
TL +L A + AL + K IH IR + +G+
Sbjct: 289 ---------------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
+I+ Y +CG + +R F +M++ K+V W+++I+ Y +HG A ALE F M +GV+
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKN--KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR 385
Query: 286 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
P+ ITF+ VL ACSHAG + +F M+ +GVE +HY C+VD+L RAG L +
Sbjct: 386 PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 34/292 (11%)
Query: 53 FSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP 112
F +K+C++L F G H A + S+ F++SALI +Y C L AR +FDEIP
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 113 HRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIAL 172
RN V W +MI Y + ++L A+ LF + V N+ + ++
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALD-AVSLFKDLLVDENDDDDAMFLDSMG------------ 185
Query: 173 YRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAY-- 230
L++++ AC V A L + IH + I+ +G+ L++AY
Sbjct: 186 ---------------LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAK 230
Query: 231 GRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGI 289
G G + +R +F ++ +DKD V ++S++S YA G + A E F+ + + V + I
Sbjct: 231 GGEGGVAVARKIFDQI--VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Query: 290 TFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
T VL A SH+G C ++ R G+E + ++D+ + GR+
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVE 339
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 48/263 (18%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT---ALRRPFLGASIH 73
+ +++ + ++A VF + + + S VL + + ALR +G IH
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR---IGKCIH 310
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ + + +++I++Y C + +AR FD + ++N W AMI+ Y +
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHA- 369
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
ALELF M ++ ++P IT +++L
Sbjct: 370 AKALELFPAM---------------------------------IDSGVRPNYITFVSVLA 396
Query: 194 AC----VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
AC ++V + G R + P + +++ GR G L + ++ +M+ M
Sbjct: 397 ACSHAGLHVEGWRWFNAMKG---RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK-M 452
Query: 250 DKDVVVWSSLISAYALHGEAKAA 272
D ++WSSL++A +H + A
Sbjct: 453 KPDSIIWSSLLAACRIHKNVELA 475
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 151 TFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHG- 209
++N +IA LA D A +A+ + M +L L P + + AC ++ + K+ H
Sbjct: 43 SWNSVIADLARSGDSA-EALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQ 101
Query: 210 ---YGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALH 266
+G ++DI + S LI Y CG L ++R VF ++ +++V W+S+I Y L+
Sbjct: 102 AFVFGYQSDIF----VSSALIVMYSTCGKLEDARKVFDEIPK--RNIVSWTSMIRGYDLN 155
Query: 267 GEAKAALETFKEMEMAGVKPDGITFL------GVLKACSHA---GFADDALCYFTRMQRD 317
G A A+ FK++ + D FL V+ ACS G + + + D
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 318 YGVEASSDHYSCLVDVLSRAG 338
GV + L+D ++ G
Sbjct: 216 RGVSVG----NTLLDAYAKGG 232
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 160/324 (49%), Gaps = 7/324 (2%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFL-GASIHAHAAK 78
+I+ H + + + L++F + + P D + FS ++ +C+A + G +HA K
Sbjct: 175 MISGHAHCGKLESCLSLFKEMLESEFKP-DCYTFSSLMNACSADSSNVVYGRMVHAVMLK 233
Query: 79 SSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALE 138
+ + S +++++ Y S A + I +V WN++I ++ ALE
Sbjct: 234 NGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGET-EKALE 292
Query: 139 LFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNV 198
+FHL N T+ +I DG +A+ + M++ + A+L AC +
Sbjct: 293 VFHLAP-EKNIVTWTTMITGYGRNGDGE-QALRFFVEMMKSGVDSDHFAYGAVLHACSGL 350
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSS 258
A L K IHG I + +G+ L+ Y +CG + + F + +KD+V W++
Sbjct: 351 ALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI--ANKDLVSWNT 408
Query: 259 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 318
++ A+ +HG A AL+ + M +G+KPD +TF+G+L CSH+G ++ F M +DY
Sbjct: 409 MLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDY 468
Query: 319 GVEASSDHYSCLVDVLSRAGRLHE 342
+ DH +C++D+ R G L E
Sbjct: 469 RIPLEVDHVTCMIDMFGRGGHLAE 492
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 138/325 (42%), Gaps = 56/325 (17%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ ++TS+ H +A+ +F + + P D + F+ +L +C +L G I +
Sbjct: 38 WNTMLTSYSRLGLHQEAIALFTQLRFSDAKP-DDYSFTAILSTCASLGNVKFGRKIQSLV 96
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFD--------------------------- 109
+S F ++ + ++LI++YG C SA +F
Sbjct: 97 IRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEA 156
Query: 110 ------EIPHRNEVVWNAMISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAALA 160
E+P R WN MIS +AH L + L LF M + P+ TF+ ++ A +
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCG-KLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
Query: 161 AQNDGAFKAIALYRRMLE------LELKPRLITLLALLPACVNVAALNLIKEIHGYGIRN 214
A + ++ ML+ +E K +++ L + + ++E+ +
Sbjct: 216 ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG-----SRDDAMRELESIEVLT 270
Query: 215 DIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALE 274
+ + +I+A + G + VF +K++V W+++I+ Y +G+ + AL
Sbjct: 271 QVSWNS-----IIDACMKIGETEKALEVF--HLAPEKNIVTWTTMITGYGRNGDGEQALR 323
Query: 275 TFKEMEMAGVKPDGITFLGVLKACS 299
F EM +GV D + VL ACS
Sbjct: 324 FFVEMMKSGVDSDHFAYGAVLHACS 348
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 69/245 (28%)
Query: 101 LTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALA 160
+ SAR +FD +P + V WN M++ Y+ L L
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSR--------LGLHQ------------------- 52
Query: 161 AQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHP 220
+AIAL+ ++ + KP + A+L C ++ + ++I IR+
Sbjct: 53 -------EAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASL 105
Query: 221 QLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSL--------------------- 259
+ + LI+ YG+C +++ VF M ++ V W SL
Sbjct: 106 PVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMP 165
Query: 260 ----------ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
IS +A G+ ++ L FKEM + KPD TF ++ ACS AD +
Sbjct: 166 KRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS----ADSSNV 221
Query: 310 YFTRM 314
+ RM
Sbjct: 222 VYGRM 226
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 151/333 (45%), Gaps = 40/333 (12%)
Query: 10 THSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLG 69
T + + +I+ + A+ +F + P D +L +C+ L G
Sbjct: 194 TERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP-DERTLVSMLGACSHLGDLRTG 252
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
+ A + F+ S LI++YG C L SAR +F+++ ++ V W AMI++Y+
Sbjct: 253 RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYS-- 310
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
QN + +A L+ M + + P TL
Sbjct: 311 --------------------------------QNGKSSEAFKLFFEMEKTGVSPDAGTLS 338
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
+L AC +V AL L K+I + + + + +GL++ YG+CG + + VF M
Sbjct: 339 TVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPV- 397
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
K+ W+++I+AYA G AK AL F M V P ITF+GVL AC HAG
Sbjct: 398 -KNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCR 453
Query: 310 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
YF M +G+ +HY+ ++D+LSRAG L E
Sbjct: 454 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDE 486
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 158/348 (45%), Gaps = 52/348 (14%)
Query: 3 SSSYYSAT----HSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLK 58
SS +S T H Y + +T+ N H+ AL+++ + + P D ++ V
Sbjct: 84 SSFLFSVTEEPNHYSFNYMIRGLTNTWND--HEAALSLYRRMKFSGLKP-DKFTYNFVFI 140
Query: 59 SCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVV 118
+C L +G S+H+ K + I +LI +Y C + AR LFDEI R+ V
Sbjct: 141 ACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVS 200
Query: 119 WNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLE 178
WN+MIS Y+ E+ + A A+ L+R+M E
Sbjct: 201 WNSMISGYS---------------------EAGY-------------AKDAMDLFRKMEE 226
Query: 179 LELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVN 238
+P TL+++L AC ++ L + + I I LGS LI YG+CG L +
Sbjct: 227 EGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDS 286
Query: 239 SRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+R VF +M + KD V W+++I+ Y+ +G++ A + F EME GV PD T VL AC
Sbjct: 287 ARRVFNQM--IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSAC 344
Query: 299 SHAGFADDALCYFTRMQRDYGVEASSDHY----SCLVDVLSRAGRLHE 342
G + + + E S H + LVD+ + GR+ E
Sbjct: 345 GSVGALE-----LGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 171/362 (47%), Gaps = 46/362 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + +I + R D+AL +F + + + V +LV + R ++
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRG-----RIDEAMNLF 194
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ +S +A+++ + AR LFD +P RN + WNAMI+ YA + + +
Sbjct: 195 ERMPRRDVVS----WTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQN-NRI 249
Query: 134 PAALELFHLMDVPPNE-STFNPIIAALAAQNDGAFKAIALYRRMLELEL----------- 181
A +LF +M P + +++N +I +N KA L+ RM E +
Sbjct: 250 DEADQLFQVM--PERDFASWNTMITGFI-RNREMNKACGLFDRMPEKNVISWTTMITGYV 306
Query: 182 ---------------------KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHP 220
KP + T +++L AC ++A L ++IH ++ +
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE 366
Query: 221 QLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEME 280
+ S L+ Y + G L+ +R +F +D++ W+S+I+ YA HG K A+E + +M
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Query: 281 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
G KP +T+L +L ACSHAG + + +F + RD + +HY+CLVD+ RAGRL
Sbjct: 427 KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRL 486
Query: 341 HE 342
+
Sbjct: 487 KD 488
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 48/257 (18%)
Query: 83 SNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHL 142
N +A+++ Y L+ A LF E+P RN V WN MI YA S + ALELF
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSG-RIDKALELFDE 165
Query: 143 MDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPR--LITLLALLPA------ 194
M N ++N ++ AL Q +A+ L+ RM PR +++ A++
Sbjct: 166 MP-ERNIVSWNSMVKAL-VQRGRIDEAMNLFERM------PRRDVVSWTAMVDGLAKNGK 217
Query: 195 ---------CV---NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEA-YGRCGCLVNSRN 241
C+ N+ + N + I GY N I QL + E + ++
Sbjct: 218 VDEARRLFDCMPERNIISWNAM--ITGYAQNNRIDEADQLFQVMPERDFASWNTMITG-- 273
Query: 242 VFWKMRDM-----------DKDVVVWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGI 289
F + R+M +K+V+ W+++I+ Y + E + AL F +M G VKP+
Sbjct: 274 -FIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Query: 290 TFLGVLKACSH-AGFAD 305
T++ +L ACS AG +
Sbjct: 333 TYVSILSACSDLAGLVE 349
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 165/331 (49%), Gaps = 44/331 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLV--LKSCTALRRPFLGAS 71
++ + LI+ + ++ QAL +F + +T + P F+L + +C LG
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQM---VTQRIKPDAFTLASSISACENAGLVPLGKQ 426
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
IH H ++ +S+ F+ ++LI++Y S+ SA +F++I HR+ V WN+M+ ++
Sbjct: 427 IHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS---- 481
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
QN + +AI+L+ M L+ +T LA+
Sbjct: 482 ------------------------------QNGNSVEAISLFDYMYHSYLEMNEVTFLAV 511
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
+ AC ++ +L K +H I + + + LI+ Y +CG L + VF M
Sbjct: 512 IQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSI 570
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 311
SS+I+AY +HG +A+ TF +M +G KP+ + F+ VL AC H+G ++ YF
Sbjct: 571 VSW--SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF 628
Query: 312 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M + +GV +S+H++C +D+LSR+G L E
Sbjct: 629 NLM-KSFGVSPNSEHFACFIDLLSRSGDLKE 658
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ ++ L++S + +AL +F + P D V++ C L + S+H
Sbjct: 167 LVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEP-DAVTMISVVEGCAELGCLRIARSVH 225
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ F + + ++L+ +Y C L S+ +F++I +N V W AMIS Y
Sbjct: 226 GQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY------- 278
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAF--KAIALYRRMLELELKPRLITLLAL 191
N G F KA+ + M++ ++P L+TL ++
Sbjct: 279 -----------------------------NRGEFSEKALRSFSEMIKSGIEPNLVTLYSV 309
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVP-HPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
L +C + + K +HG+ +R ++ P + L L+E Y CG L + V + D
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD-- 367
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGF 303
+++V W+SLIS YA G AL F++M +KPD T + AC +AG
Sbjct: 368 RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 129/274 (47%), Gaps = 38/274 (13%)
Query: 31 DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF-LGASIHAHAAKSSFLSNPFIAS 89
D A+ ++H + S T + VF VL++C R +G +H K + I +
Sbjct: 82 DAAIDLYHRLVSETT-QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIET 140
Query: 90 ALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNE 149
+L+ +YG +L+ A +FD +P R+ V W+ ++S + LE
Sbjct: 141 SLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVS----------SCLE----------- 179
Query: 150 STFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHG 209
N KA+ +++ M++ ++P +T+++++ C + L + + +HG
Sbjct: 180 -------------NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHG 226
Query: 210 YGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEA 269
R L + L+ Y +CG L++S +F K+ K+ V W+++IS+Y +
Sbjct: 227 QITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI--AKKNAVSWTAMISSYNRGEFS 284
Query: 270 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGF 303
+ AL +F EM +G++P+ +T VL +C G
Sbjct: 285 EKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 147/301 (48%), Gaps = 39/301 (12%)
Query: 46 LPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLY---GHCLSLT 102
+D + VL + T+L G H K+ F N + S LI+ Y G C +
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 103 SARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQ 162
+ +F EI + VVWN MIS Y+ M+ +E
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYS---------------MNEELSE------------- 327
Query: 163 NDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHP-Q 221
+A+ +R+M + +P + + + AC N+++ + K+IHG I++ I +
Sbjct: 328 -----EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 222 LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM 281
+ + LI Y + G L ++R VF +M +++ V ++ +I YA HG AL ++ M
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMPELN--AVSFNCMIKGYAQHGHGTEALLLYQRMLD 440
Query: 282 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
+G+ P+ ITF+ VL AC+H G D+ YF M+ + +E ++HYSC++D+L RAG+L
Sbjct: 441 SGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 342 E 342
E
Sbjct: 501 E 501
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 124/252 (49%), Gaps = 8/252 (3%)
Query: 47 PLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARH 106
P F +L A R F G S+HA KS S+ ++++ +NLY C L+ AR
Sbjct: 5 PWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARA 64
Query: 107 LFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVP-PNESTFNPIIAALAAQNDG 165
F N +N ++ YA + A +LF ++P P+ ++N +I+ A +
Sbjct: 65 AFYSTEEPNVFSYNVIVKAYAKDS-KIHIARQLFD--EIPQPDTVSYNTLISGYADARE- 120
Query: 166 AFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG 225
F A+ L++RM +L + TL L+ AC + ++LIK++H + + + + +
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNA 178
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
+ Y + G L + +VF+ M ++ +D V W+S+I AY H E AL +KEM G K
Sbjct: 179 FVTYYSKGGLLREAVSVFYGMDEL-RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFK 237
Query: 286 PDGITFLGVLKA 297
D T VL A
Sbjct: 238 IDMFTLASVLNA 249
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 154/312 (49%), Gaps = 29/312 (9%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A +++YS + + ++ ++ S+ A +F I T+ ++ ++
Sbjct: 62 ARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVS-----YNTLISGYA 116
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALI-------NLYG--HCLSLTSARHLFDEIP 112
R F + K F + F S LI +L HC S++ FD
Sbjct: 117 DARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGG---FDSYS 173
Query: 113 HRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIAL 172
N NA ++ Y+ L A+ +F+ MD +E ++N +I A +GA KA+AL
Sbjct: 174 SVN----NAFVTYYSKG-GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGA-KALAL 227
Query: 173 YRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGR 232
Y+ M+ K + TL ++L A ++ L ++ HG I+ + +GSGLI+ Y +
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSK 287
Query: 233 C-GC--LVNSRNVFWKMRDMDKDVVVWSSLISAYALHGE-AKAALETFKEMEMAGVKPDG 288
C GC + +S VF ++ + D+VVW+++IS Y+++ E ++ A+++F++M+ G +PD
Sbjct: 288 CGGCDGMYDSEKVFQEI--LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDD 345
Query: 289 ITFLGVLKACSH 300
+F+ V ACS+
Sbjct: 346 CSFVCVTSACSN 357
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 14 LLYFTKLITSH-VNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASI 72
L+ + +I+ + +N+ ++A+ F + P D F V +C+ L P I
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP-DDCSFVCVTSACSNLSSPSQCKQI 367
Query: 73 HAHAAKSSFLSNPF-IASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
H A KS SN + +ALI+LY +L AR +FD +P N V +N MI YA
Sbjct: 368 HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 132 SLPAALELFHLMD--VPPNESTFNPIIAALA 160
A L ++D + PN+ TF +++A A
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACA 458
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 152/328 (46%), Gaps = 38/328 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPL-DPHVFSLVLKSCTALRRPFLGASIHAH 75
++ +I +V +A VF + + + P L+L C G +H +
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCY 333
Query: 76 AAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPA 135
A K+ F+ + + + +I+ Y SL A F EI ++ + +N++I+
Sbjct: 334 AVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLIT----------- 382
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
+++ P ES L+ M ++P + TLL +L AC
Sbjct: 383 ----GCVVNCRPEES-------------------FRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
++AAL HGY + + + + + L++ Y +CG L ++ VF M +D+V
Sbjct: 420 SHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK--RDIVS 477
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 315
W++++ + +HG K AL F M+ GV PD +T L +L ACSH+G D+ F M
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMS 537
Query: 316 R-DYGVEASSDHYSCLVDVLSRAGRLHE 342
R D+ V DHY+C+ D+L+RAG L E
Sbjct: 538 RGDFNVIPRIDHYNCMTDLLARAGYLDE 565
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 52/299 (17%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+I ++ + ++AL +++ + ++ P + + VLK+C LR G IH+H S
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRP-TKYTYPFVLKACAGLRAIDDGKLIHSHVNCS 132
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
F ++ ++ +AL++ Y C L A +FDE+P R+ V WNAMIS + SL L
Sbjct: 133 DFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF-----SLHCCLT- 186
Query: 140 FHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE-LKPRLITLLALLPACVNV 198
I L+ M ++ L P L T++ + PA
Sbjct: 187 ----------------------------DVIGLFLDMRRIDGLSPNLSTIVGMFPALGRA 218
Query: 199 AALNLIKEIHGY----GIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
AL K +HGY G ND+V + +G+++ Y + C++ +R VF D K+ V
Sbjct: 219 GALREGKAVHGYCTRMGFSNDLV----VKTGILDVYAKSKCIIYARRVF--DLDFKKNEV 272
Query: 255 VWSSLISAYALHGEAKAALETFKEM----EMAGVKPDGITFLGVLKACSHAGFADDALC 309
WS++I Y + K A E F +M +A V P I +L C+ G C
Sbjct: 273 TWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRC 329
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 40/255 (15%)
Query: 52 VFSLVLKSCTALRRPFLGASIHAHAAKSSF-LSNPFIASALINLYGHCLSLTSARHLFDE 110
+F +L++C R LG IH H K S LS+ + L LY C + ARH+FDE
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 111 IPHR--NEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
IPH N + W+ MI YA ND A K
Sbjct: 61 IPHPRINPIAWDLMIRAYA----------------------------------SNDFAEK 86
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
A+ LY +ML ++P T +L AC + A++ K IH + +D + + L++
Sbjct: 87 ALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVD 146
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPD 287
Y +CG L + VF +M +D+V W+++IS ++LH + F +M + G+ P+
Sbjct: 147 FYAKCGELEMAIKVFDEMP--KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPN 204
Query: 288 GITFLGVLKACSHAG 302
T +G+ A AG
Sbjct: 205 LSTIVGMFPALGRAG 219
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + LIT V R +++ +FH + ++ P D VL +C+ L G+S H
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRP-DITTLLGVLTACSHLAALGHGSSCH 432
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ + N I +AL+++Y C L A+ +FD + R+ V WN M+
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTML---------- 482
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
F I L + A++L+ M E + P +TLLA+L
Sbjct: 483 ------------------FGFGIHGLGKE------ALSLFNSMQETGVNPDEVTLLAILS 518
Query: 194 ACVNVAALNLIKEIHGYGIRND--IVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
AC + ++ K++ R D ++P + + + R G L + + KM +
Sbjct: 519 ACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM-PFEP 577
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 292
D+ V +L+SA + A+ E K+M+ G + + L
Sbjct: 578 DIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVLL 618
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDI-VPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
L+LL C+ L L + IH + ++ + + + L Y C + +R+VF ++
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 306
+ + W +I AYA + A+ AL+ + +M +GV+P T+ VLKAC+ DD
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 307 ALCYFTRMQRDYGVEASSDHYSC--LVDVLSRAGRLH 341
+ + + ++D Y C LVD ++ G L
Sbjct: 122 GKLIHSHVNCS---DFATDMYVCTALVDFYAKCGELE 155
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 164/316 (51%), Gaps = 14/316 (4%)
Query: 32 QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASAL 91
++L+ F + S + D + ++ +LKSC++L G +H ++ F I +
Sbjct: 85 ESLSFFSSMKSR-GIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGV 143
Query: 92 INLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNEST 151
+ LY + A+ +FDE+ RN VVWN MI + S D + L LF M + +
Sbjct: 144 VELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGD-VERGLHLFKQMS-ERSIVS 201
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGY- 210
+N +I++L+ +A+ L+ M++ P T++ +LP ++ L+ K IH
Sbjct: 202 WNSMISSLSKCGRDR-EALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTA 260
Query: 211 ---GIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHG 267
G+ D + +G+ L++ Y + G L + +F KM+ ++VV W++LIS A++G
Sbjct: 261 ESSGLFKDFIT---VGNALVDFYCKSGDLEAATAIFRKMQR--RNVVSWNTLISGSAVNG 315
Query: 268 EAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 326
+ + ++ F M E V P+ TFLGVL CS+ G + F M + +EA ++H
Sbjct: 316 KGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEH 375
Query: 327 YSCLVDVLSRAGRLHE 342
Y +VD++SR+GR+ E
Sbjct: 376 YGAMVDLMSRSGRITE 391
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 4 SSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTAL 63
S ++ + ++ +T +I+S+ D A+++F ++ P + F ++ +
Sbjct: 332 SVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNMRFDGVYP-NEVTFVGLINAVKCN 385
Query: 64 RRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMI 123
+ G IH K+ F+S P + ++ I LY +L A+ F++I R + WNAMI
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 124 SLYAHSPDSLPAALELF--HLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
S +A + S AL++F + PNE TF ++ A+A D + K
Sbjct: 446 SGFAQNGFS-HEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQG----------- 493
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
+ H + ++ + P + S L++ Y + G + S
Sbjct: 494 -----------------------QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEK 530
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
VF +M K+ VW+S+ISAY+ HG+ + + F +M V PD +TFL VL AC+
Sbjct: 531 VFNEMSQ--KNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 302 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G D F M Y +E S +HYSC+VD+L RAGRL E
Sbjct: 589 GMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 629
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 40/250 (16%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
D +S L C LG + + K+ S+ + ++ I +Y S AR +
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRV 231
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
FDE+ ++ + WN+++S + E TF F
Sbjct: 232 FDEMSFKDMISWNSLLSGLSQ--------------------EGTF-------------GF 258
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
+A+ ++R M+ ++ ++ +++ C + L L ++IHG I+ ++G+ L+
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 228 EAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
Y +CG L ++VF +M +++VV W+++IS+ A+ F M GV P+
Sbjct: 319 SRYSKCGVLEAVKSVFHQMS--ERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPN 371
Query: 288 GITFLGVLKA 297
+TF+G++ A
Sbjct: 372 EVTFVGLINA 381
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 52/259 (20%)
Query: 48 LDPHVFSLVLKSCTA-LRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARH 106
+D L LK+C L+R G IH + S F S +++A++ +Y +A
Sbjct: 76 MDEVTLCLALKACRGDLKR---GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALC 132
Query: 107 LFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGA 166
+F+ + + V WN ++S + N+ N ++
Sbjct: 133 IFENLVDPDVVSWNTILSGF-------------------DDNQIALNFVV---------- 163
Query: 167 FKAIALYRRMLELELKPRLITLLALLPACVN----VAALNLIKEIHGYGIRNDIVPHPQL 222
RM + T L CV + L L + G+ +D+V +
Sbjct: 164 --------RMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV----V 211
Query: 223 GSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGE-AKAALETFKEMEM 281
G+ I Y R G +R VF +M KD++ W+SL+S + G A+ F++M
Sbjct: 212 GNSFITMYSRSGSFRGARRVFDEMSF--KDMISWNSLLSGLSQEGTFGFEAVVIFRDMMR 269
Query: 282 AGVKPDGITFLGVLKACSH 300
GV+ D ++F V+ C H
Sbjct: 270 EGVELDHVSFTSVITTCCH 288
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 42/296 (14%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
+D S LK+C +H + ++ + + L++ Y L SA L
Sbjct: 107 VDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKL 166
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
FDE+P R+ WNA+ IA L + N A
Sbjct: 167 FDEMPVRDVASWNAL---------------------------------IAGLVSGNR-AS 192
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEI-HGYGIRNDIVPHPQLGSGL 226
+A+ LY+RM ++ +T++A L AC ++ + + I HGY N IV +
Sbjct: 193 EAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAA----- 247
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
I+ Y +CG + + VF + K VV W+++I+ +A+HGEA ALE F ++E G+KP
Sbjct: 248 IDMYSKCGFVDKAYQVFEQFTG-KKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
D +++L L AC HAG + L F M GVE + HY C+VD+LSRAGRL E
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 361
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 10/176 (5%)
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI------ 186
L A+++F + P + +N II A + + A + YR ML+ I
Sbjct: 53 LSFAVQIFRYIPKPLT-NDWNAIIRGFAGSSHPSL-AFSWYRSMLQQSSSSSAICRVDAL 110
Query: 187 TLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
T L AC + + ++H R + L + L++AY + G L+++ +F +M
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
+DV W++LI+ A A+E +K ME G++ +T + L ACSH G
Sbjct: 171 P--VRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLG 224
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 68 LGASIHAHAAKSSFL-SNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLY 126
+G +H K FL + I + L++ Y L AR +FDE+P R V WNAMI Y
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 127 AHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRM--LELELKPR 184
D N A KA+ L+RR ++P
Sbjct: 189 CSHKDK-----------------------------GNHNARKAMVLFRRFSCCGSGVRPT 219
Query: 185 LITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQ--LGSGLIEAYGRCGCLVNSRNV 242
T++ +L A L + +HGY + P +G+ L++ Y +CGCL N+ +V
Sbjct: 220 DTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSV 279
Query: 243 FWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
F M+ K+V W+S+ + AL+G M +G+KP+ ITF +L A H G
Sbjct: 280 FELMKV--KNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIG 337
Query: 303 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ + F M+ +GV +HY C+VD+L +AGR+ E
Sbjct: 338 LVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQE 377
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 162/332 (48%), Gaps = 15/332 (4%)
Query: 19 KLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC-TALRRPFLGASIHAHAA 77
+ I +V+ + ++V+ + + P D H F +L S L P LG HA
Sbjct: 32 RAIVHNVSSPQRHSPISVYLRMRNHRVSP-DFHTFPFLLPSFHNPLHLP-LGQRTHAQIL 89
Query: 78 KSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAAL 137
+PF+ ++L+N+Y C L SA+ +FD+ ++ WN++++ YA + + A
Sbjct: 90 LFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA-GLIDDAR 148
Query: 138 ELFHLMDVPPNESTFNPIIAALAAQNDGAFK-AIALYRRML-----ELELKPRLITLLAL 191
+LF M P + + G +K A+ L+R M E ++P T+ +
Sbjct: 149 KLFDEM---PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
L AC + AL K +H Y + + LG+ LI+ Y +CG L ++ VF + K
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS-KK 264
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAGFADDALCY 310
DV +S++I A++G + F EM + + P+ +TF+G+L AC H G ++ Y
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 311 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
F M ++G+ S HY C+VD+ R+G + E
Sbjct: 325 FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 46/275 (16%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLP----LDPHVFSL--VLKSCTALRRPF 67
++ ++ LI +V ++ +AL +F + L P + P+ F++ VL +C L
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQ--LPKPNEAFVRPNEFTMSTVLSACGRLGALE 216
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEV-VWNAMISLY 126
G +HA+ K + + +ALI++Y C SL A+ +F+ + + +V ++AMI
Sbjct: 217 QGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI--- 273
Query: 127 AHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE-LKPRL 185
L ++ L D + L+ M + + P
Sbjct: 274 --------CCLAMYGLTD-----------------------ECFQLFSEMTTSDNINPNS 302
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRN-DIVPHPQLGSGLIEAYGRCGCLVNSRNVFW 244
+T + +L ACV+ +N K I I P Q +++ YGR G L+ F
Sbjct: 303 VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSG-LIKEAESFI 361
Query: 245 KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM 279
M+ DV++W SL+S + G+ K K +
Sbjct: 362 ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 156/330 (47%), Gaps = 42/330 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T +I+ + D+A+ + + P D + VL +C L G +H
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP-DEITVAAVLSACATLGDLDTGVELH 421
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
A K+ +S +A+ LIN+Y C + A +F IP +N + W ++I
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII---------- 471
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
A L L N+ F+A+ R+M ++ L+P ITL A L
Sbjct: 472 -AGLRL-----------------------NNRCFEALIFLRQM-KMTLQPNAITLTAALA 506
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFW-KMRDMDKD 252
AC + AL KEIH + +R + L + L++ Y RCG + N W + KD
Sbjct: 507 ACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM----NTAWSQFNSQKKD 562
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
V W+ L++ Y+ G+ +E F M + V+PD ITF+ +L CS + L YF+
Sbjct: 563 VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFS 622
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+M+ DYGV + HY+C+VD+L RAG L E
Sbjct: 623 KME-DYGVTPNLKHYACVVDLLGRAGELQE 651
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 10 THSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLG 69
+ L + L+ + Q D+A+ ++H + + D + F VL++C + G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
+H H + + + + +ALI +Y C + SAR LFD +P R+ + WNAMIS Y
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF-- 273
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
+N + + L+ M L + P L+TL
Sbjct: 274 --------------------------------ENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
+++ AC + L ++IH Y I + + L + Y G + +F +M
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER- 360
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 308
KD+V W+++IS Y + A++T++ M+ VKPD IT VL AC+ G D +
Sbjct: 361 -KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 31 DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASA 90
++A+ + + + L + +D VF +++ C R G+ +++ A S + +A
Sbjct: 76 EEAMKLLNSMQE-LRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 91 LINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNES 150
+ ++ +L A ++F ++ RN WN ++ YA
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQ--------------------- 173
Query: 151 TFNPIIAALAAQNDGAF-KAIALYRRMLEL-ELKPRLITLLALLPACVNVAALNLIKEIH 208
G F +A+ LY RML + +KP + T +L C + L KE+H
Sbjct: 174 --------------GYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 209 GYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGE 268
+ +R + + LI Y +CG + ++R +F +M +D++ W+++IS Y +G
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP--RRDIISWNAMISGYFENGM 277
Query: 269 AKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
LE F M V PD +T V+ AC G
Sbjct: 278 CHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 137/275 (49%), Gaps = 45/275 (16%)
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
AS+ H A + L F+ + ++ AR +FD+ ++ WNAMIS YA S
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVE---------QAREVFDQTHDKDIFSWNAMISGYAQS 415
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL-ELKPRLITL 188
+P +A + L+R M+ ++KP IT+
Sbjct: 416 ----------------------LSPQLA------------LHLFREMISSSQVKPDAITM 441
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+++ A ++ +L K H Y + I P+ L + +I+ Y +CG + + N+F + ++
Sbjct: 442 VSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKN 501
Query: 249 MDKDVVV-WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 307
+ + W+++I A HG AK AL+ + +++ +KP+ ITF+GVL AC HAG +
Sbjct: 502 ISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELG 561
Query: 308 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
YF M+ D+G+E HY C+VD+L +AGRL E
Sbjct: 562 KTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEE 596
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 143/318 (44%), Gaps = 38/318 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T LI + ++ +A+ +F + + L + L+ + V+ +C+ L + + + A
Sbjct: 141 YTTLIKGYAQNNQWSEAMELFREMRN-LGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K F+++ L+++Y CL L AR LFDE+P RN V WN M++ Y+ + + A
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAG-LIEQA 258
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
ELF + + ++ +I +N +A+ Y ML +KP + ++ LL A
Sbjct: 259 EELFDQI-TEKDIVSWGTMIDGCLRKNQ-LDEALVYYTEMLRCGMKPSEVMMVDLLSASA 316
Query: 197 NVAALNLIKEIHG--------------------YGIRNDI-----------VPHPQLGSG 225
+ ++HG Y + NDI H +
Sbjct: 317 RSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNA 376
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM-EMAGV 284
LI + + G + +R VF + DKD+ W+++IS YA + AL F+EM + V
Sbjct: 377 LIAGFVKNGMVEQAREVFDQTH--DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 285 KPDGITFLGVLKACSHAG 302
KPD IT + V A S G
Sbjct: 435 KPDAITMVSVFSAISSLG 452
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 138/285 (48%), Gaps = 17/285 (5%)
Query: 57 LKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNE 116
L SC + G IH KS SN +I ++++N+Y C L A +F + +
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 117 VVWNAMISLYAHSPDSLPAALELFHLMDVPPNES--TFNPIIAALAAQNDGAFKAIALYR 174
+N M+ Y S L AL+LF DV P S ++ +I AQN+ +A+ L+R
Sbjct: 108 ASFNIMVDGYVRSR-RLWDALKLF---DVMPERSCVSYTTLIKGY-AQNNQWSEAMELFR 162
Query: 175 RMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG 234
M L + +TL ++ AC ++ + + + I+ + + + L+ Y C
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 235 CLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGV 294
CL ++R +F +M ++++V W+ +++ Y+ G + A E F ++ + D +++ +
Sbjct: 223 CLKDARKLFDEMP--ERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTM 276
Query: 295 LKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 339
+ C D+AL Y+T M R G++ S +VD+LS + R
Sbjct: 277 IDGCLRKNQLDEALVYYTEMLR-CGMKPSE---VMMVDLLSASAR 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 36/267 (13%)
Query: 7 YSATHSRLLYFTKLITSHVNQSRHDQ-ALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
+ TH + ++ + S QS Q AL +F + S+ + D V + ++L
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
G H + S+ N + +A+I++Y C S+ +A ++F + + IS
Sbjct: 454 LEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKN---------ISS 504
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
SP +N II A A+ LY + L +KP
Sbjct: 505 STISP---------------------WNAIICGSATHGHAKL-ALDLYSDLQSLPIKPNS 542
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRND--IVPHPQLGSGLIEAYGRCGCLVNSRNVF 243
IT + +L AC + + L K + +++D I P + +++ G+ G L ++ +
Sbjct: 543 ITFVGVLSACCHAGLVELGK-TYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMI 601
Query: 244 WKMRDMDKDVVVWSSLISAYALHGEAK 270
KM + DV++W L+SA HG +
Sbjct: 602 KKM-PVKADVMIWGMLLSASRTHGNVE 627
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 176/370 (47%), Gaps = 49/370 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF---LGA 70
++ + L++ + ++ A+ V + P + SL+ A+ P LG
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLL----QAVAEPGHLKLGK 245
Query: 71 SIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS- 129
+IH + ++ + ++ + LI++Y L AR +FD + +N V WN+++S +++
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 130 ------------------PDSL---------------PAALELFHLMD---VPPNESTFN 153
PD++ AL++ M V PN ++
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 154 PIIAALAAQNDGAFK-AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGI 212
I + + +G F+ A+ ++ +M E + P T+ LL ++ L+ KE+HG+ +
Sbjct: 366 AIFSGCS--KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 213 RNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAA 272
R +++ + + L++ YG+ G L ++ +FW +++ K + W+ ++ YA+ G +
Sbjct: 424 RKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKN--KSLASWNCMLMGYAMFGRGEEG 481
Query: 273 LETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVD 332
+ F M AG++PD ITF VL C ++G + YF M+ YG+ + +H SC+VD
Sbjct: 482 IAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVD 541
Query: 333 VLSRAGRLHE 342
+L R+G L E
Sbjct: 542 LLGRSGYLDE 551
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 38/276 (13%)
Query: 67 FLGASIHAHAAKSSF-LSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
FLG +IH K S+ + SA + YG C+SL A LFDE+P R+++ WN ++ +
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
S + A+ELF M Q GA K
Sbjct: 64 NLRSGN-WEKAVELFREM------------------QFSGA---------------KAYD 89
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
T++ LL C N ++IHGY +R + + + + LI Y R G L SR VF
Sbjct: 90 STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNS 149
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
M+D +++ W+S++S+Y G A+ EME+ G+KPD +T+ +L + G +
Sbjct: 150 MKD--RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSK 207
Query: 306 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
DA+ RMQ G++ S+ S L+ ++ G L
Sbjct: 208 DAIAVLKRMQI-AGLKPSTSSISSLLQAVAEPGHLK 242
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 37/324 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I + + D+ALT F + + D + + +C L+ G IHA A
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDR-GIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
S F S+ +AL+ LY C + + F++ + + WNA++S + S +
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN----- 672
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
NE +A+ ++ RM + T + + A
Sbjct: 673 -----------NE------------------EALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
A + K++H + ++ + LI Y +CG + ++ F ++ K+ V W
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST--KNEVSW 761
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
+++I+AY+ HG AL++F +M + V+P+ +T +GVL ACSH G D + YF M
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 317 DYGVEASSDHYSCLVDVLSRAGRL 340
+YG+ +HY C+VD+L+RAG L
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLL 845
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 140/315 (44%), Gaps = 44/315 (13%)
Query: 31 DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASA 90
++A+ +F +H P D + + ++ +C+A F G +HA+ K F SN I A
Sbjct: 371 EKAMELFKRMHLDGLEP-DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 91 LINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNES 150
L+NLY C + +A F E N V+WN M+ Y L+D N
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG--------------LLDDLRN-- 473
Query: 151 TFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGY 210
+ ++R+M E+ P T ++L C+ + L L ++IH
Sbjct: 474 ------------------SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 211 GIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAK 270
I+ + + + S LI+ Y + G L + ++ +R KDVV W+++I+ Y +
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 271 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA-SSD--HY 327
AL TF++M G++ D + + AC AG AL ++ V SSD
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSAC--AGL--QALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 328 SCLVDVLSRAGRLHE 342
+ LV + SR G++ E
Sbjct: 630 NALVTLYSRCGKIEE 644
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 37/271 (13%)
Query: 32 QALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASAL 91
+A+ +F ++ +P P+ FS VL +C + +G +H K F S+ ++ +AL
Sbjct: 271 EAIRLFCDMYVLGIMPT-PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 92 INLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNEST 151
++LY H +L SA H+F + R+ V +N +I+ + A+ELF M +
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG-EKAMELFKRMHL------ 382
Query: 152 FNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
DG L+P TL +L+ AC L +++H Y
Sbjct: 383 ------------DG---------------LEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 212 IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA 271
+ + ++ L+ Y +C + + + F + ++VV+W+ ++ AY L + +
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYF--LETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 272 ALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
+ F++M++ + P+ T+ +LK C G
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 123/290 (42%), Gaps = 38/290 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF-LGASI 72
+ + K+I +++ + +F + S P + FS VL++C F + I
Sbjct: 151 IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP-NEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
HA + + + LI+LY + AR +FD + ++ W AMIS +
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS----- 264
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
+N+ +AI L+ M L + P ++L
Sbjct: 265 -----------------------------KNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 295
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
AC + +L + +++HG ++ + + L+ Y G L+++ ++F M +D
Sbjct: 296 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ--RD 353
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
V +++LI+ + G + A+E FK M + G++PD T ++ ACS G
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 153/327 (46%), Gaps = 38/327 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
F L + ++A V+ ++ P D +L++C G+ ++
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCP-DSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP-HRNEVVWNAMISLYAHSPDSLPA 135
K F S +A ALIN++ C +L +A LFD+ ++ V WN M++ Y
Sbjct: 529 IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGY--------- 579
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
L H A +A+A +R+M + +P +T + ++ A
Sbjct: 580 ---LLH----------------------GQAEEAVATFRQMKVEKFQPNAVTFVNIVRAA 614
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
++AL + +H I+ +G+ L++ Y +CG + +S F ++ + K +V
Sbjct: 615 AELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISN--KYIVS 672
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 315
W++++SAYA HG A A+ F M+ +KPD ++FL VL AC HAG ++ F M
Sbjct: 673 WNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMG 732
Query: 316 RDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ +EA +HY+C+VD+L +AG E
Sbjct: 733 ERHKIEAEVEHYACMVDLLGKAGLFGE 759
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 36/231 (15%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G +IH +A + + + +A++L+++Y C L A LF I R+ V W+AMI+ Y
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQ 378
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
A Q+D +AI+L+R M+ + +KP +TL
Sbjct: 379 -------------------------------AGQHD---EAISLFRDMMRIHIKPNAVTL 404
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
++L C VAA L K IH Y I+ DI + + +I Y +CG + F ++
Sbjct: 405 TSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP- 463
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
KD V +++L Y G+A A + +K M++ GV PD T +G+L+ C+
Sbjct: 464 -IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 56/316 (17%)
Query: 33 ALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALI 92
AL +FH + S + +D ++ + + L + + +H K F+ +S LI
Sbjct: 185 ALLLFHDMRSC-CVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSGLI 241
Query: 93 NLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLM---DVPPNE 149
++Y +C L +A +F+E+ ++E W M++ YAH+ LELF LM DV N+
Sbjct: 242 DMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNG-FFEEVLELFDLMRNYDVRMNK 300
Query: 150 STFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHG 209
+ A A D K IA IH
Sbjct: 301 VAAASALQAAAYVGD-LVKGIA-----------------------------------IHD 324
Query: 210 YGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEA 269
Y ++ ++ + + L+ Y +CG L + +F + D +DVV WS++I++Y G+
Sbjct: 325 YAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED--RDVVSWSAMIASYEQAGQH 382
Query: 270 KAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL-----CYFTRMQRDYGVEASS 324
A+ F++M +KP+ +T VL+ C AG A L CY + +E+
Sbjct: 383 DEAISLFRDMMRIHIKPNAVTLTSVLQGC--AGVAASRLGKSIHCYAIKAD----IESEL 436
Query: 325 DHYSCLVDVLSRAGRL 340
+ + ++ + ++ GR
Sbjct: 437 ETATAVISMYAKCGRF 452
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 44/279 (15%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + +I + H +AL F ++ + D + F+ LK+C G IH
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIH 123
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
A+ S+ +I +AL+ +Y L SAR +FD++ ++ V WN M+S A + S
Sbjct: 124 DLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCS- 182
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
AAL LFH M R +++ ++L L+P
Sbjct: 183 SAALLLFHDM-------------------------------RSCCVDIDH--VSLYNLIP 209
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVF---WKMRDMD 250
A + ++ + +HG I+ + SGLI+ Y C L + +VF W+
Sbjct: 210 AVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWR----- 262
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGI 289
KD W ++++AYA +G + LE F M V+ + +
Sbjct: 263 KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKV 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 43/223 (19%)
Query: 91 LINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD----VP 146
LIN Y +R +FD + V+WN+MI Y + AL F M +
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLH-REALGFFGYMSEEKGID 97
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKE 206
P++ +F + A A D +++ L + +LI E
Sbjct: 98 PDKYSFTFALKACAGSMD--------FKKGLRIH---------------------DLIAE 128
Query: 207 IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALH 266
+ G+ +D+ +G+ L+E Y + LV++R VF KM KDVV W++++S A +
Sbjct: 129 M---GLESDVY----IGTALVEMYCKARDLVSARQVFDKMHV--KDVVTWNTMVSGLAQN 179
Query: 267 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
G + AAL F +M V D ++ ++ A S +D C
Sbjct: 180 GCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRC 222
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Query: 187 TLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
LL +L C N L ++HG I + + PH QL I AY SR +F +
Sbjct: 7 NLLLMLRECKNFRCL---LQVHGSLIVSGLKPHNQL----INAYSLFQRQDLSRVIFDSV 59
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACS 299
RD VV+W+S+I Y G + AL F M E G+ PD +F LKAC+
Sbjct: 60 RD--PGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 153/329 (46%), Gaps = 37/329 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + +I + +AL +F + + S VL +C +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNE-GFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ K+ N ++ +AL++LY C + A +F+ + ++ V W++M++ Y
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV------ 239
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
QN +A+ LYRR + L+ TL +++
Sbjct: 240 ----------------------------QNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC N+AAL K++H ++ + + S ++ Y +CG L S +F ++++ K++
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE--KNL 329
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
+W+++IS +A H K + F++M+ G+ P+ +TF +L C H G ++ +F
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M+ YG+ + HYSC+VD+L RAG L E
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
+L C A+ K HG IR D+ L + LI AY +CG + +R VF M ++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM--LE 124
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 308
+ +V W+++I Y + AL+ F EM G K T VL AC G DAL
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDAL 179
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 143/331 (43%), Gaps = 38/331 (11%)
Query: 13 RLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASI 72
+L + +I + +++ L++F +H L D + V LR +G I
Sbjct: 55 KLTTWNAMIAGLIQFEFNEEGLSLFREMHG-LGFSPDEYTLGSVFSGSAGLRSVSIGQQI 113
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
H + K + + S+L ++Y L + +P RN V WN +I
Sbjct: 114 HGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI--------- 164
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
AQN + LY+ M +P IT + +L
Sbjct: 165 -------------------------MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 199
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
+C ++A ++IH I+ + S LI Y +CGCL ++ F + D D+
Sbjct: 200 SSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE- 258
Query: 253 VVVWSSLISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYF 311
V+WSS+ISAY HG+ A+E F M E ++ + + FL +L ACSH+G D L F
Sbjct: 259 -VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF 317
Query: 312 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M YG + HY+C+VD+L RAG L +
Sbjct: 318 DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQ 348
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 42/230 (18%)
Query: 71 SIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSP 130
+++ K +++S ++ LIN Y L +AR +FDE+P R WNAMI
Sbjct: 15 AVYGRMRKKNYMS----SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI------- 63
Query: 131 DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
A L F FN + ++L+R M L P TL +
Sbjct: 64 ----AGLIQFE----------FNE-------------EGLSLFREMHGLGFSPDEYTLGS 96
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
+ + ++++ ++IHGY I+ + + S L Y R G L + V +R M
Sbjct: 97 VFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV---IRSMP 153
Query: 251 -KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
+++V W++LI A +G + L +K M+++G +P+ ITF+ VL +CS
Sbjct: 154 VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 155/332 (46%), Gaps = 38/332 (11%)
Query: 12 SRLLY-FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGA 70
R LY + +I+ VN + +A +F + L+ + H F+++L++ L ++G
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELS-DCETHTFAVMLRASAGLGSIYVGK 244
Query: 71 SIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSP 130
+H A K + N F++ LI++Y C + AR F+ +P + V WN +I+ YA
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 131 DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
S A L+ + D + F TL
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQF----------------------------------TLSI 330
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
++ +A L L K+ H IRN + L++ Y + G + +R VF K+
Sbjct: 331 MIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP--R 388
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 310
K+++ W++L+ YA HG A++ F++M A V P+ +TFL VL AC+++G ++
Sbjct: 389 KNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEI 448
Query: 311 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
F M +G++ + HY+C++++L R G L E
Sbjct: 449 FLSMSEVHGIKPRAMHYACMIELLGRDGLLDE 480
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D F + SC G IH+HA + + I++Y SAR LF
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
D + R V W MIS YA D MD +
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGD-----------MD-----------------------E 340
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHG----YGIRNDIVPHPQLGS 224
A+AL+ M++ KP L+TLL+L+ C +L K I YG + D V + +
Sbjct: 341 ALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV---MICN 397
Query: 225 GLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGV 284
LI+ Y +CG + +R++F +K VV W+++I+ YAL+G AL+ F +M
Sbjct: 398 ALIDMYSKCGSIHEARDIF--DNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY 455
Query: 285 KPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
KP+ ITFL VL+AC+H+G + YF M++ Y + DHYSC+VD+L R G+L E
Sbjct: 456 KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEE 513
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 21 ITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSS 80
I VN++ ++L +F + P + F V K+C L +HAH KS
Sbjct: 24 IREAVNRNDPVESLLLFREMKRGGFEP-NNFTFPFVAKACARLADVGCCEMVHAHLIKSP 82
Query: 81 FLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELF 140
F S+ F+ +A ++++ C S+ A +F+ +P R+ WNAM+S + S
Sbjct: 83 FWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS----------- 131
Query: 141 HLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAA 200
D AF +L+R M E+ P +T++ L+ + +
Sbjct: 132 --------------------GHTDKAF---SLFREMRLNEITPDSVTVMTLIQSASFEKS 168
Query: 201 LNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLI 260
L L++ +H GIR + + + I YG+CG L +++ VF + D+ VV W+S+
Sbjct: 169 LKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF 228
Query: 261 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
AY++ GEA A + M KPD TF+ + +C +
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 130/329 (39%), Gaps = 60/329 (18%)
Query: 27 QSRH-DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNP 85
QS H D+A ++F + P V +L+ +S + + L ++HA +
Sbjct: 130 QSGHTDKAFSLFREMRLNEITPDSVTVMTLI-QSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 86 FIASALINLYGHCLSLTSARHLFDEIPH--RNEVVWNAMISLYAHSPDSLPAALELFHLM 143
+A+ I+ YG C L SA+ +F+ I R V WN+M Y
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAY----------------- 231
Query: 144 DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNL 203
S F AF A LY ML E KP L T + L +C N L
Sbjct: 232 ------SVFGE-----------AFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 274
Query: 204 IKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAY 263
+ IH + I + + I Y + ++R +F M + V W+ +IS Y
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM--TSRTCVSWTVMISGY 332
Query: 264 ALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEAS 323
A G+ AL F M +G KPD +T L ++ C F ++ ++A
Sbjct: 333 AEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK----------FGSLETGKWIDAR 382
Query: 324 SDHYSC----------LVDVLSRAGRLHE 342
+D Y C L+D+ S+ G +HE
Sbjct: 383 ADIYGCKRDNVMICNALIDMYSKCGSIHE 411
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 54/266 (20%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I+ + + D+AL +FH + + P + SL+ C G I A A
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI-SGCGKFGSLETGKWIDARA 383
Query: 77 -AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPA 135
N I +ALI++Y C S+ AR +FD P + V W MI+ YA + L
Sbjct: 384 DIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLE- 442
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
AL+LF M ++L+ KP IT LA+L AC
Sbjct: 443 ALKLFSKM---------------------------------IDLDYKPNHITFLAVLQAC 469
Query: 196 VNVAALN-------LIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+ +L ++K+++ +I P S +++ GR G L + + +R+
Sbjct: 470 AHSGSLEKGWEYFHIMKQVY------NISPGLDHYSCMVDLLGRKGKLEEALEL---IRN 520
Query: 249 MDK--DVVVWSSLISAYALHGEAKAA 272
M D +W +L++A +H K A
Sbjct: 521 MSAKPDAGIWGALLNACKIHRNVKIA 546
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 133/278 (47%), Gaps = 39/278 (14%)
Query: 68 LGASIHAHAAKSS-FLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLY 126
+G IH K+ FLS+ + + ++ +Y L AR +FDEIP + V W+ +++ Y
Sbjct: 134 VGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 127 AHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI 186
L ++ + ++R ML L+P
Sbjct: 194 VR----------------------------CGLGSE------GLEVFREMLVKGLEPDEF 219
Query: 187 TLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQ-LGSGLIEAYGRCGCLVNSRNVFWK 245
++ L AC V AL K IH + + + +G+ L++ Y +CGC+ + VF K
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKK 279
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSHAGFA 304
+ ++V W++LI YA +G AK A+ + +E G+KPD + LGVL AC+H GF
Sbjct: 280 L--TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFL 337
Query: 305 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ M+ Y + +HYSC+VD++ RAGRL +
Sbjct: 338 EEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDD 375
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Query: 113 HRNEVVWNAMISLYAHSPD---SLPAALELFHLMDVPPNESTFNPII--AALAAQNDGAF 167
HRN + +++ + H P+ A +F +++P N ++ +I + ++Q
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIP-NSFVYDTMIRICSRSSQPHLGL 98
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI-VPHPQLGSGL 226
+ L + E ++ P +T L+ AC+ ++ K+IH + ++N + + + +G+
Sbjct: 99 RYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGV 158
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
+ Y L+++R VF ++ DVV W L++ Y G LE F+EM + G++P
Sbjct: 159 LRIYVEDKLLLDARKVFDEIPQ--PDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 338
D + L AC+ G +++ +E+ + LVD+ ++ G
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCG 268
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 47/282 (16%)
Query: 68 LGASIHAHAAKSS-FLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLY 126
+G IH K+ FLS+ + + ++ +Y L AR +FDEIP + V W+ +++ Y
Sbjct: 134 VGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 127 AHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI 186
L ++ + +++ ML ++P
Sbjct: 194 VR----------------------------CGLGSE------GLEVFKEMLVRGIEPDEF 219
Query: 187 TLLALLPACVNVAALNLIKEIHGY-----GIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
++ L AC V AL K IH + I +D+ +G+ L++ Y +CGC+ +
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF----VGTALVDMYAKCGCIETAVE 275
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMA-GVKPDGITFLGVLKACSH 300
VF K+ ++V W++LI YA +G AK A +E G+KPD + LGVL AC+H
Sbjct: 276 VFEKL--TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAH 333
Query: 301 AGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
GF ++ M+ YG+ +HYSC+VD++ RAGRL +
Sbjct: 334 GGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDD 375
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 113 HRNEVVWNAMISLYAHSPD---SLPAALELFHLMDVPPNESTFNPII--AALAAQNDGAF 167
HRN + +++ + H P+ A +F +++P N ++ +I + ++Q
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIP-NSFVYDTMIRICSRSSQPHLGL 98
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI-VPHPQLGSGL 226
+ L + E ++ P +T L+ AC+ ++ K+IH + ++N + + + +G+
Sbjct: 99 RYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGV 158
Query: 227 IEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
+ Y L ++R VF ++ DVV W L++ Y G LE FKEM + G++P
Sbjct: 159 LRIYVEDKLLFDARKVFDEIPQ--PDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEP 216
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 338
D + L AC+ G +++ +E+ + LVD+ ++ G
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCG 268
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 156/329 (47%), Gaps = 38/329 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ T LI + + +A+ F + P + + ++ VL SC L+ G IH
Sbjct: 232 VVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQP-NEYTYASVLISCGNLKDIGNGKLIH 290
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
KS F S ++L+ +Y C + + +F I + N+V W ++
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSL----------- 339
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
I+ L QN A+ +R+M+ +KP TL + L
Sbjct: 340 ----------------------ISGLV-QNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
C N+A ++IHG + GSGLI+ YG+CGC +R VF + ++D V
Sbjct: 377 GCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVD--V 434
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
+ +++I +YA +G + AL+ F+ M G++P+ +T L VL AC+++ ++ F
Sbjct: 435 ISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDS 494
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++D + ++DHY+C+VD+L RAGRL E
Sbjct: 495 FRKD-KIMLTNDHYACMVDLLGRAGRLEE 522
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 42/253 (16%)
Query: 51 HVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDE 110
H FS +L+ C R +I AH KS F + S L++ C + AR +FD
Sbjct: 66 HNFSQLLRQCIDERSISGIKTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVFDG 124
Query: 111 IPHRNEVVWNAMISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAF 167
+ R+ V WN++I+ S A+E++ LM +V P+E T + + F
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRS-KEAVEMYRLMITNNVLPDEYTLSSV-----------F 172
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
KA + L LE + + LA+ I G + N V GS L+
Sbjct: 173 KAFS----DLSLEKEAQRSHGLAV---------------ILGLEVSNVFV-----GSALV 208
Query: 228 EAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
+ Y + G ++ V ++ + KDVV+ ++LI Y+ GE A++ F+ M + V+P+
Sbjct: 209 DMYVKFGKTREAKLVLDRVEE--KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPN 266
Query: 288 GITFLGVLKACSH 300
T+ VL +C +
Sbjct: 267 EYTYASVLISCGN 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
LL C++ +++ IK I + +++ P GS L++A +CG + +R VF M +
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGMSE-- 127
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 310
+ +V W+SLI+ H +K A+E ++ M V PD T V KA S +A
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA--- 184
Query: 311 FTRMQRDY------GVEASSDHY-SCLVDVLSRAGRLHE 342
QR + G+E S+ S LVD+ + G+ E
Sbjct: 185 ----QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 153/329 (46%), Gaps = 38/329 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T ++T + +A+ + + + D V +L++ L +G S+H
Sbjct: 182 VICWTTMVTGFAQAGKSLKAVEFYREMQNE-GFGRDRVVMLGLLQASGDLGDTKMGRSVH 240
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ ++ N + ++L+++Y + A +F + + V W ++IS +A
Sbjct: 241 GYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA------ 294
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
QN A KA M L +P L+TL+ +L
Sbjct: 295 ----------------------------QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLV 326
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC V +L + +H Y ++ ++ + L++ Y +CG L +SR +F + KD+
Sbjct: 327 ACSQVGSLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGR--KDL 383
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
V W+++IS Y +HG + + F +M + ++PD TF +L A SH+G + +F+
Sbjct: 384 VCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSV 443
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M Y ++ S HY CL+D+L+RAGR+ E
Sbjct: 444 MINKYKIQPSEKHYVCLIDLLARAGRVEE 472
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 57/281 (20%)
Query: 27 QSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA-AKSSFLSNP 85
Q++H F +H TL P L+S + L+R IHA + + L+
Sbjct: 3 QTKH------FCMLHRTLLCPKRIKF----LQSISKLKRHI--TQIHAFVISTGNLLNGS 50
Query: 86 FIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDV 145
I+ LI G ++ AR +FDE+P R V+N+MI +Y+ +
Sbjct: 51 SISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKN-------------- 96
Query: 146 PPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIK 205
P+E + LY +M+ +++P T + AC++ L +
Sbjct: 97 -PDE-------------------VLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGE 136
Query: 206 EIH----GYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLIS 261
+ +G +ND+ + S ++ Y +CG + + +F KM +DV+ W+++++
Sbjct: 137 AVWCKAVDFGYKNDVF----VCSSVLNLYMKCGKMDEAEVLFGKM--AKRDVICWTTMVT 190
Query: 262 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
+A G++ A+E ++EM+ G D + LG+L+A G
Sbjct: 191 GFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLG 231
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 136/247 (55%), Gaps = 16/247 (6%)
Query: 97 HCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPII 156
H L++ S R L ++ N +I++Y D + +A+++F L+ PN ++N +I
Sbjct: 604 HGLAIKSLRELDTQLQ-------NTLITMYGRCKD-IESAVKVFGLIS-DPNLCSWNCVI 654
Query: 157 AALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI 216
+AL+ QN + L+R L+L+P IT + LL A + + + + H + IR
Sbjct: 655 SALS-QNKAGREVFQLFRN---LKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGF 710
Query: 217 VPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETF 276
+P + + L++ Y CG L VF + W+S+ISA+ HG + A+E F
Sbjct: 711 QANPFVSAALVDMYSSCGMLETGMKVF--RNSGVNSISAWNSVISAHGFHGMGEKAMELF 768
Query: 277 KEMEM-AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 335
KE+ + ++P+ +F+ +L ACSH+GF D+ L Y+ +M+ +GV+ ++H +VD+L
Sbjct: 769 KELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLG 828
Query: 336 RAGRLHE 342
RAG+L E
Sbjct: 829 RAGKLRE 835
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 152/372 (40%), Gaps = 75/372 (20%)
Query: 31 DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPF-IAS 89
++A + + + S + D + C L G ++H + + S + +
Sbjct: 374 EEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVIN 433
Query: 90 ALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH--------------------- 128
++I++YG C T A LF HR+ V WN+MIS ++
Sbjct: 434 SVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCS 493
Query: 129 ---------------SPDSL----------------PAALELFHLMDVPPNESTFNPIIA 157
S DSL +A M + +++N +I+
Sbjct: 494 KFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVIS 553
Query: 158 ALAA-----QNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGI 212
A+ ++ AF+A++ E +++ LITLL + A N+ + + HG I
Sbjct: 554 GCASSGHHLESLRAFQAMSR-----EGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAI 608
Query: 213 RNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAA 272
++ QL + LI YGRC + ++ VF + D ++ W+ +ISA + + KA
Sbjct: 609 KSLRELDTQLQNTLITMYGRCKDIESAVKVFGLIS--DPNLCSWNCVISALS---QNKAG 663
Query: 273 LETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGVEASSDHYSC 329
E F+ ++P+ ITF+G+L A + G + A C+ R G +A+ +
Sbjct: 664 REVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIR----RGFQANPFVSAA 719
Query: 330 LVDVLSRAGRLH 341
LVD+ S G L
Sbjct: 720 LVDMYSSCGMLE 731
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 127/276 (46%), Gaps = 47/276 (17%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSF--LSNPFIASALINLYGHCLSLTSARH 106
D FS V+ +C+++ LG S+H KS + ++ + +++I++Y C +A
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 107 LFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGA 166
+F+E+ R+ + NA+++ +A +G
Sbjct: 348 VFEELVCRDVISSNAILNGFAA-----------------------------------NGM 372
Query: 167 FK-AIALYRRMLELE-LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHP-QLG 223
F+ A + +M ++ ++P + T++++ C +++ + +HGY +R ++ ++
Sbjct: 373 FEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVI 432
Query: 224 SGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM--EM 281
+ +I+ YG+CG + +F +D+V W+S+ISA++ +G A FKE+ E
Sbjct: 433 NSVIDMYGKCGLTTQAELLF--KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY 490
Query: 282 AGVKPDGITFLGVLKACSHAG---FADDALCYFTRM 314
+ K T L +L +C + F C+ ++
Sbjct: 491 SCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKL 526
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
+H A ++ + + + +AL+NLY +L+SA +F + HR+ V WN +++
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMT------- 262
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
LA N K++ ++ M + +T +
Sbjct: 263 -------------------------KCLA--NGHPRKSLQYFKSMTGSGQEADTVTFSCV 295
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVP--HPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
+ AC ++ L L + +HG I++ P H +G+ +I Y +CG + VF ++ +
Sbjct: 296 ISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL--V 353
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEME-MAGVKPDGITFLGVLKACSHAGFADDAL 308
+DV+ +++++ +A +G + A +M+ + ++PD T + + C F+ +
Sbjct: 354 CRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGR 413
Query: 309 C---YFTRMQ 315
Y RM+
Sbjct: 414 AVHGYTVRME 423
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 71 SIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSP 130
S+H A K L + +S L+ YG L S+ LFDE+ ++ +VWN+MI+
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT------ 161
Query: 131 DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
AL QN A+ L+ M+ + TLL
Sbjct: 162 -----ALN-----------------------QNGRYIAAVGLFIEMIHKGNEFDSTTLLL 193
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
A ++ +H I +V L + L+ Y + L ++ VF M
Sbjct: 194 AASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHME--H 251
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
+D+V W+++++ +G + +L+ FK M +G + D +TF V+ ACS
Sbjct: 252 RDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 57/258 (22%)
Query: 46 LPLDPHVFSLV--LKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTS 103
L L+P+ + V L + T L G H H + F +NPF+++AL+++Y C L +
Sbjct: 673 LKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLET 732
Query: 104 ARHLFDEIPHRNEVVWNAMISLYAHSPDSL-PAALELFHLM----DVPPNESTFNPIIAA 158
+F + WN++IS AH + A+ELF + ++ PN+S+F I+
Sbjct: 733 GMKVFRNSGVNSISAWNSVIS--AHGFHGMGEKAMELFKELSSNSEMEPNKSSF---ISL 787
Query: 159 LAAQNDGAF--KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI 216
L+A + F + ++ Y++M E +G++
Sbjct: 788 LSACSHSGFIDEGLSYYKQMEE------------------------------KFGVK--- 814
Query: 217 VPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETF 276
P + +++ GR G L + + + K VW +L+SA HG+ K E
Sbjct: 815 -PVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQK-AGVWGALLSACNYHGDTKLGKEVA 872
Query: 277 K---EMEMAGVKPDGITF 291
+ EME PD ++
Sbjct: 873 EVLFEME-----PDNASY 885
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 157/334 (47%), Gaps = 37/334 (11%)
Query: 9 ATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFL 68
A +S + + +++ + ++ AL + I+ + L D + S LK C L
Sbjct: 302 AVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQS-DLCFDSYTLSGALKICINYVNLRL 360
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G +H+ S + + + S L++L+ + ++ A LF +P+++ + ++ +I
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIR---- 416
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
+S FN + A L+R +++L L +
Sbjct: 417 -----------------GCVKSGFNSL-------------AFYLFRELIKLGLDADQFIV 446
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+L C ++A+L K+IHG I+ P + L++ Y +CG + N +F M
Sbjct: 447 SNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM-- 504
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 308
+++DVV W+ +I + +G + A F +M G++P+ +TFLG+L AC H+G ++A
Sbjct: 505 LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEAR 564
Query: 309 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M+ +YG+E +HY C+VD+L +AG E
Sbjct: 565 STLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQE 598
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 157/339 (46%), Gaps = 16/339 (4%)
Query: 10 THSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLG 69
+ ++ +T +++ + + + ++A+ ++ + + + ++S VLK+C + LG
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
++ K + + + ++++++Y L A F EI + WN +IS Y +
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
+ A+ LFH M PN ++N +I+ + G+ +A+ RM L L
Sbjct: 187 -GLMDEAVTLFHRMP-QPNVVSWNCLISGFV--DKGSPRALEFLVRMQREGLVLDGFALP 242
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR-D 248
L AC L + K++H +++ + P S LI+ Y CG L+ + +VF + +
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH-----AGF 303
++ V VW+S++S + ++ E +AAL ++ + + D T G LK C + G
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGL 362
Query: 304 ADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+L + + DY V S LVD+ + G + +
Sbjct: 363 QVHSLVVVSGYELDYIVG------SILVDLHANVGNIQD 395
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 30/307 (9%)
Query: 46 LPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSAR 105
+ +D + + L+ C ++ G SI AH K N FIA+ +I++Y L+ A
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH 60
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLP-AALELFHLM----DVPPNESTFNPIIAALA 160
+FDE+ RN V W M+S Y + D P A+EL+ M + NE ++ ++ A
Sbjct: 61 KVFDEMSERNIVTWTTMVSGY--TSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG 118
Query: 161 AQNDGAFKAIALYRRMLELELKPRLITLLALLPACVN----VAALNLIKEIHGYGIRNDI 216
D I +Y R+ + L+ ++ + +++ V + A + KEI +
Sbjct: 119 LVGDIQL-GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI--------L 169
Query: 217 VPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETF 276
P + LI Y + G + + +F +M +VV W+ LIS + G + ALE
Sbjct: 170 RPSSTSWNTLISGYCKAGLMDEAVTLFHRMP--QPNVVSWNCLISGFVDKGSPR-ALEFL 226
Query: 277 KEMEMAGVKPDGITFLGVLKACSHAGF---ADDALCYFTRMQRDYGVEASSDHYSCLVDV 333
M+ G+ DG LKACS G C + G+E+S S L+D+
Sbjct: 227 VRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVK----SGLESSPFAISALIDM 282
Query: 334 LSRAGRL 340
S G L
Sbjct: 283 YSNCGSL 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 104/261 (39%), Gaps = 45/261 (17%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ F+ LI V + A +F + L L D + S +LK C++L G IH
Sbjct: 408 IIAFSGLIRGCVKSGFNSLAFYLFREL-IKLGLDADQFIVSNILKVCSSLASLGWGKQIH 466
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
K + S P A+AL+++Y C + + LFD + R+ V W +I + + +
Sbjct: 467 GLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQN-GRV 525
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
A FH +M+ + ++P +T L LL
Sbjct: 526 EEAFRYFH---------------------------------KMINIGIEPNKVTFLGLLS 552
Query: 194 ACVNVAALNLIKEI-----HGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
AC + L + YG+ P+ + +++ G+ G + + KM
Sbjct: 553 ACRHSGLLEEARSTLETMKSEYGLE----PYLEHYYCVVDLLGQAGLFQEANELINKM-P 607
Query: 249 MDKDVVVWSSLISAYALHGEA 269
++ D +W+SL++A H A
Sbjct: 608 LEPDKTIWTSLLTACGTHKNA 628
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 155/329 (47%), Gaps = 37/329 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T LI ++ + +A+ F + ++ +P + F+ + +C +L R G +H
Sbjct: 275 VVSWTSLIVAYKRIGQEVKAVETFIKMRNS-QVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ + ++++++ +Y C +L SA LF + R+ + W+ +I Y
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQ----- 388
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
A + FK + R + KP L +LL
Sbjct: 389 --------------------------AGFGEEGFKYFSWMR---QSGTKPTDFALASLLS 419
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
N+A + +++H + + + + S LI Y +CG + + +F + D D D+
Sbjct: 420 VSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGET-DRD-DI 477
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
V +++I+ YA HG++K A++ F++ G +PD +TF+ VL AC+H+G D YF
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNM 537
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
MQ Y + + +HY C+VD+L RAGRL +
Sbjct: 538 MQETYNMRPAKEHYGCMVDLLCRAGRLSD 566
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 146/336 (43%), Gaps = 58/336 (17%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +IT V+ R+ + LT F + + L D + F++ LK+C LR+ G +IH H
Sbjct: 177 WTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
F++ +A++L +Y C + LF+ + R+ V W ++I Y + A
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK-A 294
Query: 137 LELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
+E F M VPPNE TF + +A A +L R + +L
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACA----------SLSRLVWGEQLH----------- 333
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
NV +L L ND + + + +++ Y CG LV++ +F MR +D+
Sbjct: 334 --CNVLSLGL----------NDSLS---VSNSMMKMYSTCGNLVSASVLFQGMR--CRDI 376
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD------- 306
+ WS++I Y G + + F M +G KP +L + +
Sbjct: 377 ISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHAL 436
Query: 307 ALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
ALC +G+E +S S L+++ S+ G + E
Sbjct: 437 ALC--------FGLEQNSTVRSSLINMYSKCGSIKE 464
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 39/291 (13%)
Query: 11 HSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTL-TLPLDPHVFSLVLKSCTALRRPFLG 69
H ++ +T +I +V + D+AL +F + + D V S+VLK+C G
Sbjct: 68 HGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYG 127
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
S+HA+A K+S LS+ ++ S+L+++Y + + +F E+P RN V W A+I+ H+
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHA 187
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK-AIALYRRMLELELKPRLITL 188
G +K + + M E T
Sbjct: 188 -----------------------------------GRYKEGLTYFSEMSRSEELSDTYTF 212
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
L AC + + K IH + I V + + L Y CG + + +F M
Sbjct: 213 AIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS- 271
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
++DVV W+SLI AY G+ A+ETF +M + V P+ TF + AC+
Sbjct: 272 -ERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 34/200 (17%)
Query: 100 SLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAAL 159
+L +AR +FD++PH + V W ++I Y + +S AL LF M
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNS-DEALILFSAM---------------- 97
Query: 160 AAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPH 219
R+++ + P L +L AC + + + +H Y ++ ++
Sbjct: 98 ---------------RVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSS 142
Query: 220 PQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM 279
+GS L++ Y R G + S VF +M ++ V W+++I+ G K L F EM
Sbjct: 143 VYVGSSLLDMYKRVGKIDKSCRVFSEMP--FRNAVTWTAIITGLVHAGRYKEGLTYFSEM 200
Query: 280 EMAGVKPDGITFLGVLKACS 299
+ D TF LKAC+
Sbjct: 201 SRSEELSDTYTFAIALKACA 220
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 157/335 (46%), Gaps = 45/335 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPFLGAS 71
L+ + +I V+ +AL F + + P F+L +LK+C++ + G
Sbjct: 173 LISWNAMIAGFVHAGYGSKALDTFGMMQEA-NIKERPDEFTLTSLLKACSSTGMIYAGKQ 231
Query: 72 IHAHAAKSSF--LSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
IH +S F S+ I +L++LY C L SAR FD+I + + W+++I YA
Sbjct: 232 IHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQE 291
Query: 130 PDSLPAALELFHLMDVPPNESTF--NPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
+ + A L ++ +F + II G F AL R+ +++
Sbjct: 292 GEFVEAMGLFKRLQELNSQIDSFALSSII--------GVFADFALLRQGKQMQ------A 337
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
L LP+ + + LN + ++ Y +CG + + F +M+
Sbjct: 338 LAVKLPSGLETSVLNSV----------------------VDMYLKCGLVDEAEKCFAEMQ 375
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 307
KDV+ W+ +I+ Y HG K ++ F EM ++PD + +L VL ACSH+G +
Sbjct: 376 --LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 433
Query: 308 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
F+++ +G++ +HY+C+VD+L RAGRL E
Sbjct: 434 EELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 113/253 (44%), Gaps = 44/253 (17%)
Query: 56 VLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRN 115
+L+ CT G +H + KS N ++ LI++Y C A +FD +P RN
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 116 EVVWNAMISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIAL 172
V W+A++S + + D L +L LF M + PNE TF+
Sbjct: 72 VVSWSALMSGHVLNGD-LKGSLSLFSEMGRQGIYPNEFTFSTN----------------- 113
Query: 173 YRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGR 232
L AC + AL +IHG+ ++ ++G+ L++ Y +
Sbjct: 114 -------------------LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 154
Query: 233 CGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK--PDGIT 290
CG + + VF R +D+ ++ W+++I+ + G AL+TF M+ A +K PD T
Sbjct: 155 CGRINEAEKVF--RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFT 212
Query: 291 FLGVLKACSHAGF 303
+LKACS G
Sbjct: 213 LTSLLKACSSTGM 225
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 133/310 (42%), Gaps = 42/310 (13%)
Query: 1 MASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC 60
MA + S ++ ++ L++ HV +L++F + P + FS LK+C
Sbjct: 59 MAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYP-NEFTFSTNLKAC 117
Query: 61 TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
L G IH K F + ++L+++Y C + A +F I R+ + WN
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE 180
AMI+ + H+ AL+ F +M ++
Sbjct: 178 AMIAGFVHAGYG-SKALDTFGMMQEA-------------------------------NIK 205
Query: 181 LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI-VPHPQLGSG-LIEAYGRCGCLVN 238
+P TL +LL AC + + K+IHG+ +R+ P +G L++ Y +CG L +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 239 SRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+R F +++ +K ++ WSSLI YA GE A+ FK ++ + D ++
Sbjct: 266 ARKAFDQIK--EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV- 322
Query: 299 SHAGFADDAL 308
FAD AL
Sbjct: 323 ----FADFAL 328
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 187 TLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
L+++L C + ++H Y +++ + + LI+ Y +C + + VF M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS-----HA 301
+ ++VV WS+L+S + L+G+ K +L F EM G+ P+ TF LKAC
Sbjct: 68 PE--RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125
Query: 302 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G C G E + + LVD+ S+ GR++E
Sbjct: 126 GLQIHGFCL------KIGFEMMVEVGNSLVDMYSKCGRINE 160
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 143/289 (49%), Gaps = 34/289 (11%)
Query: 84 NPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLM 143
N + +I Y + AR LF+ +P + EV W +M+ Y S + A E F +M
Sbjct: 202 NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS-GRIEDAEEFFEVM 260
Query: 144 DVPP------------------------------NESTFNPIIAALAAQNDGAFKAIALY 173
+ P + +T+ +I A + +A+ L+
Sbjct: 261 PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG-FELEALDLF 319
Query: 174 RRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRC 233
+M + ++P +L+++L C +A+L +++H + +R + S L+ Y +C
Sbjct: 320 AQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKC 379
Query: 234 GCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 293
G LV ++ VF R KD+++W+S+IS YA HG + AL+ F EM +G P+ +T +
Sbjct: 380 GELVKAKLVF--DRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIA 437
Query: 294 VLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+L ACS+AG ++ L F M+ + V + +HYSC VD+L RAG++ +
Sbjct: 438 ILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDK 486
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 101/248 (40%), Gaps = 37/248 (14%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
+I ++ + +AL +F + P P + S +L C L G +HAH +
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS-ILSVCATLASLQYGRQVHAHLVRC 360
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
F + ++AS L+ +Y C L A+ +FD ++ ++WN++IS YA S AL++
Sbjct: 361 QFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYA-SHGLGEEALKI 419
Query: 140 FHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVA 199
FH M P+ T P +TL+A+L AC
Sbjct: 420 FHEM---PSSGTM------------------------------PNKVTLIAILTACSYAG 446
Query: 200 ALNLIKEI-HGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSS 258
L EI + + P + S ++ GR G + + + M + D VW +
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM-TIKPDATVWGA 505
Query: 259 LISAYALH 266
L+ A H
Sbjct: 506 LLGACKTH 513
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 12/280 (4%)
Query: 69 GASIHAHAAKSSFLSNPF------IASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAM 122
G I A+ F PF S ++ +Y + + AR F++IP +N VW+ M
Sbjct: 155 GKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLM 214
Query: 123 ISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELK 182
+S Y D A + + + +N +IA A QN + AI + M +
Sbjct: 215 MSGYFRIGDVHEARAIFYRVF--ARDLVIWNTLIAGYA-QNGYSDDAIDAFFNMQGEGYE 271
Query: 183 PRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNV 242
P +T+ ++L AC L++ +E+H I + + + LI+ Y +CG L N+ +V
Sbjct: 272 PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSV 331
Query: 243 FWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
F + + V +S+IS A+HG+ K ALE F ME +KPD ITF+ VL AC H G
Sbjct: 332 FESISV--RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGG 389
Query: 303 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
F + L F+ M+ V+ + H+ CL+ +L R+G+L E
Sbjct: 390 FLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKE 428
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 163/330 (49%), Gaps = 18/330 (5%)
Query: 15 LYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALR-RPFLGASIH 73
+ + LI +H+++ QAL ++ I P L+L++C + R LG +H
Sbjct: 12 FHVSNLIKNHISRGSPIQALVLYGGIRRRGVYF--PGWVPLILRACACVVPRVVLGKLLH 69
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ + K S+ + S+LI++YG C + SAR +FDE+P RN WNAMI Y + D++
Sbjct: 70 SESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAV 129
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
A+ LF + V N T+ +I + + KA L+ RM ELK + +L
Sbjct: 130 LAS-GLFEEISVCRNTVTWIEMIKGYGKRIE-IEKARELFERM-PFELK-NVKAWSVMLG 185
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQ--LGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
VN + ++ + +P + S ++ Y R G + +R +F+ R +
Sbjct: 186 VYVNNRKMEDARKFF------EDIPEKNAFVWSLMMSGYFRIGDVHEARAIFY--RVFAR 237
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 311
D+V+W++LI+ YA +G + A++ F M+ G +PD +T +L AC+ +G D
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 312 TRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
+ + G+E + + L+D+ ++ G L
Sbjct: 298 SLINHR-GIELNQFVSNALIDMYAKCGDLE 326
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + +Y L+ + LI + D A+ F ++ P D S +L +C
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEP-DAVTVSSILSACA 285
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
R +G +H+ N F+++ALI++Y C L +A +F+ I R+ N+
Sbjct: 286 QSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNS 345
Query: 122 MISLYA-HSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAF--KAIALYRR 175
MIS A H ALE+F M D+ P+E TF IA L A G F + + ++
Sbjct: 346 MISCLAIHGKG--KEALEMFSTMESLDLKPDEITF---IAVLTACVHGGFLMEGLKIFSE 400
Query: 176 MLELELKPRLI---TLLALLPACVNVA-ALNLIKEIH 208
M ++KP + L+ LL + A L+KE+H
Sbjct: 401 MKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 437
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 164/384 (42%), Gaps = 64/384 (16%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
LI + N+ + +++ + T D + F LV+K C+ + +G+S+H +
Sbjct: 80 LIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRI 139
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
F + + ++ ++ YG C L SAR +F E+P RN V W A++ Y S + L A +
Sbjct: 140 GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE-LEEAKSM 198
Query: 140 FHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVA 199
F LM N ++N ++ L D A L+ M + ++ + V+
Sbjct: 199 FDLMP-ERNLGSWNALVDGLVKSGD-LVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVS 256
Query: 200 ALNLIKEIHGYGIR---------------------------NDIVPHPQLGSGLIEAYGR 232
A +L +E G +R ++ P + GL+ A +
Sbjct: 257 ARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQ 316
Query: 233 CGCL----------------VNSRNVFWKMRDMD------------------KDVVVWSS 258
GC +S V + DM+ +D+V + S
Sbjct: 317 MGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCS 376
Query: 259 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 318
++ A+HG A+ F++M G+ PD + F +LK C + ++ L YF M++ Y
Sbjct: 377 MMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKY 436
Query: 319 GVEASSDHYSCLVDVLSRAGRLHE 342
+ AS DHYSC+V++LSR G+L E
Sbjct: 437 SILASPDHYSCIVNLLSRTGKLKE 460
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 37/330 (11%)
Query: 14 LLYFTKLITSHV-NQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASI 72
++ +T LIT ++ N + +A+ +F + + + + FS K+C L P +G +
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
A K SN +A+++I+++ + A+ F+ + +N V +N
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT----------- 444
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
+D F +A L + E EL T +LL
Sbjct: 445 ---------FLDGTCRNLNFE--------------QAFKLLSEITERELGVSAFTFASLL 481
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
NV ++ ++IH ++ + + + + LI Y +CG + + VF M + ++
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN--RN 539
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
V+ W+S+I+ +A HG A LETF +M GVKP+ +T++ +L ACSH G + +F
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M D+ ++ +HY+C+VD+L RAG L +
Sbjct: 600 SMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 128/338 (37%), Gaps = 57/338 (16%)
Query: 9 ATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFL 68
+ +R+ +LI H+N A++ + P+D FS +LKSC R L
Sbjct: 21 SVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRL 80
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPH---RNEVVWNAMISL 125
G +HA + + + ++LI+LY A +F+ + R+ V W+AM++
Sbjct: 81 GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMAC 140
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
Y + N AI ++ LEL L P
Sbjct: 141 YGN----------------------------------NGRELDAIKVFVEFLELGLVPND 166
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRND-IVPHPQLGSGLIEAYGRC-GCLVNSRNVF 243
A++ AC N + + + G+ ++ +G LI+ + + N+ VF
Sbjct: 167 YCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVF 226
Query: 244 WKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH--- 300
KM ++ +VV W+ +I+ G + A+ F +M ++G + D T V AC+
Sbjct: 227 DKMSEL--NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 301 -------------AGFADDALCYFTRMQRDYGVEASSD 325
+G DD C M + S D
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVD 322
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 46/294 (15%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ ++ ++ + N R A+ VF +P D + ++ V+++C+ +G
Sbjct: 131 VVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPND-YCYTAVIRACSNSDFVGVGRVTL 189
Query: 74 AHAAKSS-FLSNPFIASALINLYGHCL-SLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
K+ F S+ + +LI+++ S +A +FD++ N V W MI+
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQ--- 246
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
M P +AI + M+ + TL ++
Sbjct: 247 -----------MGFPR--------------------EAIRFFLDMVLSGFESDKFTLSSV 275
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRC---GCLVNSRNVFWKMRD 248
AC + L+L K++H + IR+ +V + L++ Y +C G + + R VF +M
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRME- 332
Query: 249 MDKDVVVWSSLISAYALHGE-AKAALETFKEMEMAG-VKPDGITFLGVLKACSH 300
D V+ W++LI+ Y + A A+ F EM G V+P+ TF KAC +
Sbjct: 333 -DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 5/162 (3%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A ++ S + L+ + + +QA + I + L + F+ +L
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI-TERELGVSAFTFASLLSGVA 485
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
+ G IH+ K N + +ALI++Y C S+ +A +F+ + +RN + W +
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 122 MISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAALA 160
MI+ +A ++ LE F+ M V PNE T+ I++A +
Sbjct: 546 MITGFAKHGFAIR-VLETFNQMIEEGVKPNEVTYVAILSACS 586
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 155/324 (47%), Gaps = 48/324 (14%)
Query: 26 NQSRHDQALTVFHHIHSTLTLPLDPH--VFSLVLKSCTALRRPFLGASIHAHAAKSSFLS 83
+Q+ ++A+ +F + LT ++P F+ ++++C LG H K F S
Sbjct: 606 SQNNLEEAVVLFQEM---LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSS 662
Query: 84 -NPFIASALINLYGHCLSLTSARHLFDEIPH-RNEVVWNAMISLYAHSPDSLPAALELFH 141
++ +L+ +Y + +T A LF E+ ++ V+W M+S HS
Sbjct: 663 EGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS--GHS------------ 708
Query: 142 LMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAAL 201
QN +A+ Y+ M + P T + +L C +++L
Sbjct: 709 --------------------QNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL 748
Query: 202 NLIKEIHG--YGIRNDIVPHPQLGSG-LIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSS 258
+ IH + + +D+ +L S LI+ Y +CG + S VF +MR +VV W+S
Sbjct: 749 REGRAIHSLIFHLAHDL---DELTSNTLIDMYAKCGDMKGSSQVFDEMRRR-SNVVSWNS 804
Query: 259 LISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY 318
LI+ YA +G A+ AL+ F M + + PD ITFLGVL ACSHAG D F M Y
Sbjct: 805 LINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQY 864
Query: 319 GVEASSDHYSCLVDVLSRAGRLHE 342
G+EA DH +C+VD+L R G L E
Sbjct: 865 GIEARVDHVACMVDLLGRWGYLQE 888
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 36/233 (15%)
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
LG +HA A K SN ++ S+L+++Y C + +A +F+ + +N+V WNAMI YA
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA 404
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
H+ +S +ELF MD+ + + T
Sbjct: 405 HNGES-HKVMELF--MDMKSSGYNIDDF-------------------------------T 430
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
+LL C L + + H I+ + + +G+ L++ Y +CG L ++R +F +M
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM- 489
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
D+D V W+++I +Y A + FK M + G+ DG LKAC+H
Sbjct: 490 -CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 15 LYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHA 74
+++ +I + + + + +F + S+ +D F+ +L +C A +G+ H+
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSS-GYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLP 134
K N F+ +AL+++Y C +L AR +F+ + R+ V WN +I Y
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV------- 505
Query: 135 AALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
Q++ +A L++RM + L + L A
Sbjct: 506 ---------------------------QDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
C +V L K++H ++ + GS LI+ Y +CG + ++R VF + + VV
Sbjct: 539 CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW--SVV 596
Query: 255 VWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
++LI+ Y+ + A+ F+EM GV P ITF +++AC
Sbjct: 597 SMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 36/284 (12%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
+ FS+VL +C G IH K N + AL+++Y C ++ AR +F
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 109 DEIPHRNEVVWNAMISLY-------------------AHSPDSLP------AALELFHLM 143
+ I N V W + S Y H PD L + L L
Sbjct: 219 EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLK 278
Query: 144 DV--------PPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
D P+ +N +I+ + AI + M + +K TL ++L A
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETV-AIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
VA L+L +H I+ + + +GS L+ Y +C + + VF + +K+ V
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE--EKNDVF 395
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
W+++I YA +GE+ +E F +M+ +G D TF +L C+
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I S+V +A +F ++ + D + LK+CT + + G +H +
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMN-LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K + S+LI++Y C + AR +F +P + V NA+I+ Y+ +
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN------ 609
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
LE +A+ L++ ML + P IT ++ AC
Sbjct: 610 LE-----------------------------EAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQ-LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
+L L + HG + + LG L+ Y + + +F ++ K +V+
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS-PKSIVL 699
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
W+ ++S ++ +G + AL+ +KEM GV PD TF+ VL+ CS
Sbjct: 700 WTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 39/248 (15%)
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
+G ++H+ + S + +A+++LY C ++ A FD + ++ WN+M+S+Y+
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYS 136
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
S P K + + + E ++ P T
Sbjct: 137 ----------------------SIGKP------------GKVLRSFVSLFENQIFPNKFT 162
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVF-WKM 246
+L C + ++IH I+ + + G L++ Y +C + ++R VF W +
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 306
D + V W+ L S Y G + A+ F+ M G +PD + F+ V+ G D
Sbjct: 223 ---DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 307 ALCYFTRM 314
A F M
Sbjct: 280 ARLLFGEM 287
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 164/318 (51%), Gaps = 17/318 (5%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPH--VFSLVLKSCTALRRPFLGASIHA 74
+ +++ + + AL +F+ + L L + P+ + +V+ +C+ P L S+
Sbjct: 232 WNAMLSGYAQNGFTEDALRLFNDM---LRLGVRPNETTWVIVISACSFRADPSLTRSLVK 288
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEI-PHRNEVVWNAMISLYAHSPDSL 133
+ N F+ +AL++++ C + SAR +F+E+ RN V WNAMIS Y D +
Sbjct: 289 LIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGD-M 347
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL-ELKPRLITLLALL 192
+A +LF M N ++N +IA A A AI + M++ + KP +T++++L
Sbjct: 348 SSARQLFDTMP-KRNVVSWNSLIAGYAHNGQAAL-AIEFFEDMIDYGDSKPDEVTMISVL 405
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
AC ++A L L I Y +N I + LI Y R G L ++ VF +M++ +D
Sbjct: 406 SACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKE--RD 463
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
VV +++L +A+A +G+ L +M+ G++PD +T+ VL AC+ AG + F
Sbjct: 464 VVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFK 523
Query: 313 RMQRDYGVEASSDHYSCL 330
++ +DHY+C+
Sbjct: 524 SIR-----NPLADHYACM 536
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 26/265 (9%)
Query: 89 SALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLM---DV 145
+ +I + L +AR FD +P ++ V WNAM+S YA + + AL LF+ M V
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFT-EDALRLFNDMLRLGV 260
Query: 146 PPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL--ELKPRL-----ITLLALLPACVNV 198
PNE+T+ +I+A + + D +L R +++L E + RL LL + C ++
Sbjct: 261 RPNETTWVIVISACSFRADP-----SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDI 315
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSS 258
+ I + G + ++V + +I Y R G + ++R +F M ++VV W+S
Sbjct: 316 QSARRI--FNELGTQRNLVTW----NAMISGYTRIGDMSSARQLFDTMP--KRNVVSWNS 367
Query: 259 LISAYALHGEAKAALETFKEM-EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 317
LI+ YA +G+A A+E F++M + KPD +T + VL AC H + C ++++
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN 427
Query: 318 YGVEASSDHYSCLVDVLSRAGRLHE 342
++ + Y L+ + +R G L E
Sbjct: 428 -QIKLNDSGYRSLIFMYARGGNLWE 451
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNE-VVWNAMISLY 126
LG IH A K++ +ALI YG C + +F + R + V WN+MIS Y
Sbjct: 535 LGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 127 AHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI 186
H+ + L AL+L M L+ RL
Sbjct: 595 IHN-ELLAKALDLVWFM-----------------------------------LQTGQRLD 618
Query: 187 TLL--ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFW 244
+ + +L A +VA L E+H +R + +GS L++ Y +CG L + F
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 245 KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG-VKPDGITFLGVLKACSHAGF 303
M ++ W+S+IS YA HG+ + AL+ F+ M++ G PD +TF+GVL ACSHAG
Sbjct: 679 TMPV--RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL 736
Query: 304 ADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ +F M YG+ +H+SC+ DVL RAG L +
Sbjct: 737 LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 131/303 (43%), Gaps = 57/303 (18%)
Query: 50 PHVFSLV--LKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
P F+L+ L SC +L+ LG IH + K N +++AL+ LY L R +
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF 167
F +P ++V WN++I A S SLP A+ F L AQ G
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCF------------------LNAQRAGQ- 513
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
K IT ++L A +++ L K+IHG ++N+I + LI
Sbjct: 514 --------------KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALI 559
Query: 228 EAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA-ALETFKEMEMAGVKP 286
YG+CG + +F +M + +D V W+S+IS Y +H E A AL+ M G +
Sbjct: 560 ACYGKCGEMDGCEKIFSRMAER-RDNVTWNSMISGY-IHNELLAKALDLVWFMLQTGQRL 617
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY---------SCLVDVLSRA 337
D + VL A FA A ++R V A S S LVD+ S+
Sbjct: 618 DSFMYATVLSA-----FASVAT-----LERGMEVHACSVRACLESDVVVGSALVDMYSKC 667
Query: 338 GRL 340
GRL
Sbjct: 668 GRL 670
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 118/280 (42%), Gaps = 47/280 (16%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLV------LKSCTALRRPFLGASIH 73
L+ V Q ++A +F ++S + + + +V L L L++ G +H
Sbjct: 280 LMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKK---GREVH 336
Query: 74 AHAAKSSFLSNPF-IASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
H + + I + L+N+Y C S+ AR +F + ++ V WN+MI+
Sbjct: 337 GHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT-------- 388
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
L+ QN +A+ Y+ M ++ P TL++ L
Sbjct: 389 ---GLD-----------------------QNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
+C ++ L ++IHG ++ I + + + L+ Y G L R +F M + D+
Sbjct: 423 SSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ- 481
Query: 253 VVVWSSLISAYALHGEA-KAALETFKEMEMAGVKPDGITF 291
V W+S+I A A + A+ F + AG K + ITF
Sbjct: 482 -VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 48 LDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHL 107
LD +++ VL + ++ G +HA + ++ S+ + SAL+++Y C L A
Sbjct: 617 LDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 676
Query: 108 FDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDV----PPNESTFNPIIAA 158
F+ +P RN WN+MIS YA AL+LF M + PP+ TF +++A
Sbjct: 677 FNTMPVRNSYSWNSMISGYARHGQG-EEALKLFETMKLDGQTPPDHVTFVGVLSA 730
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 46/249 (18%)
Query: 57 LKSCTALRRPFLGAS--IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR 114
++SC R GA+ H+ K+ + ++ + LIN Y SAR +FDE+P R
Sbjct: 10 VQSCVGHR----GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYR 174
N V W ++S Y+ +N +A+ R
Sbjct: 66 NCVSWACIVSGYS----------------------------------RNGEHKEALVFLR 91
Query: 175 RMLELELKPRLITLLALLPACVNVAALNLI--KEIHGYGIRNDIVPHPQLGSGLIEAYGR 232
M++ + +++L AC + ++ ++ ++IHG + + + LI Y +
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 233 C-GCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITF 291
C G + + F + K+ V W+S+IS Y+ G+ ++A F M+ G +P TF
Sbjct: 152 CIGSVGYALCAFGDIEV--KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF 209
Query: 292 LG-VLKACS 299
V ACS
Sbjct: 210 GSLVTTACS 218
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 18/260 (6%)
Query: 89 SALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFH----LMD 144
+++I+ Y + A+ LFD +P R+ V W MI YA L H L D
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYA--------KLGFVHHAKTLFD 307
Query: 145 VPPNEST--FNPIIAALAAQNDGAFKAIALYRRM-LELELKPRLITLLALLPACVNVAAL 201
P+ +N ++A QN +A+ ++ M E L P TL+ +LPA + L
Sbjct: 308 QMPHRDVVAYNSMMAGYV-QNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 202 NLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLIS 261
+ ++H Y + +LG LI+ Y +CG + ++ VF + + K + W+++I
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN--KSIDHWNAMIG 424
Query: 262 AYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVE 321
A+HG ++A + ++E +KPD ITF+GVL ACSH+G + L F M+R + +E
Sbjct: 425 GLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE 484
Query: 322 ASSDHYSCLVDVLSRAGRLH 341
HY C+VD+LSR+G +
Sbjct: 485 PRLQHYGCMVDILSRSGSIE 504
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 20/301 (6%)
Query: 46 LPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSAR 105
+ +D SLVLK+C+ L G IH K+ S+ F+ + LI LY C L +R
Sbjct: 117 VSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSR 176
Query: 106 HLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVP-PNESTFNPIIAALAAQND 164
+FD +P R+ V +N+MI Y + +A ELF LM + N ++N +I+ A +D
Sbjct: 177 QMFDRMPKRDSVSYNSMIDGYVKC-GLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD 235
Query: 165 GAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGS 224
G A L+ M E + LI+ +++ V + K + R D+V +
Sbjct: 236 GVDIASKLFADMPEKD----LISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTW----A 287
Query: 225 GLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG- 283
+I+ Y + G + +++ +F +M +DVV ++S+++ Y + ALE F +ME
Sbjct: 288 TMIDGYAKLGFVHHAKTLFDQMP--HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESH 345
Query: 284 VKPDGITFLGVLKACSHAGFADDAL---CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
+ PD T + VL A + G A+ Y Q G + L+D+ S+ G +
Sbjct: 346 LLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG----VALIDMYSKCGSI 401
Query: 341 H 341
Sbjct: 402 Q 402
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 121/301 (40%), Gaps = 43/301 (14%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A + + H ++ + ++ +V H +AL +F + L D +VL +
Sbjct: 302 AKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIA 361
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
L R +H + + F + ALI++Y C S+ A +F+ I +++ WNA
Sbjct: 362 QLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNA 421
Query: 122 MISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
MI L + L ES F+ ++ ++ L L
Sbjct: 422 MI-----------GGLAIHGL-----GESAFDMLL------------------QIERLSL 447
Query: 182 KPRLITLLALLPACVNVAALNLIKE----IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLV 237
KP IT + +L AC + L+KE ++ I P Q +++ R G +
Sbjct: 448 KPDDITFVGVLNACSHSG---LVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Query: 238 NSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM-AGVKPDGITFLGVLK 296
++N+ +M ++ + V+W + ++A + H E + K + + AG P L +
Sbjct: 505 LAKNLIEEM-PVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMY 563
Query: 297 A 297
A
Sbjct: 564 A 564
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 151/357 (42%), Gaps = 71/357 (19%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ LI + ++AL + + L D H F VL ++L+ +G +HA
Sbjct: 228 WNTLIAGYAQNGYEEEALKMAVSMEEN-GLKWDEHSFGAVLNVLSSLKSLKIGKEVHARV 286
Query: 77 AKSSFLSNPFIASALINLYGHCLSL-------------------------------TSAR 105
K+ SN F++S ++++Y C ++ A+
Sbjct: 287 LKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAK 346
Query: 106 HLFDEIPHRNEVVWNAMISLYAH--SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQN 163
LFD + +N VVW AM Y + PDS+ F NE+
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF-----IANETN------------ 389
Query: 164 DGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLG 223
P + ++++L AC A + KEIHG+ +R I+ +L
Sbjct: 390 ------------------TPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV 431
Query: 224 SGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG 283
+ ++ Y +CG + + +F ++D V+++++I+ A HG + + F++M G
Sbjct: 432 TAFVDMYSKCGNVEYAERIF--DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGG 489
Query: 284 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
KPD ITF+ +L AC H G + YF M Y + + HY+C++D+ +A RL
Sbjct: 490 FKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRL 546
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
H + KS ++ L+NLY L AR++FDE+ RN WNA+I+ Y ++
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYV-KFNN 69
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI---TLL 189
+ A ELF + + T+N +++ A + +AI ++ M E I T+
Sbjct: 70 VKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVT 129
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG------------CL- 236
++ + + +++HG ++ S LI Y +CG C+
Sbjct: 130 TMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVE 189
Query: 237 -VNS--RN-----------------VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETF 276
V+S RN VFW+ +++ D + W++LI+ YA +G + AL+
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKALSVFWRNPELN-DTISWNTLIAGYAQNGYEEEALKMA 248
Query: 277 KEMEMAGVKPDGITFLGVLKACS 299
ME G+K D +F VL S
Sbjct: 249 VSMEENGLKWDEHSFGAVLNVLS 271
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 127/304 (41%), Gaps = 40/304 (13%)
Query: 32 QALTVFHHIHSTLT--LPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIAS 89
+A+ +F +H + +D + ++K L F G +H K+ F S
Sbjct: 105 EAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVS 164
Query: 90 ALINLYGHCLSLTSARHLFDE--IPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPP 147
+LI++Y C ++F+ + + V NAMI+ Y D + AL +F
Sbjct: 165 SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGD-IDKALSVFWRNPELN 223
Query: 148 NESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEI 207
+ ++N +IA A QN +A+ + M E LK + A+L ++ +L + KE+
Sbjct: 224 DTISWNTLIAGYA-QNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEV 282
Query: 208 HGYGIRNDIVPHPQLGSGLIEAYGRCGC-------------------------------L 236
H ++N + + SG+++ Y +CG +
Sbjct: 283 HARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKM 342
Query: 237 VNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKE-MEMAGVKPDGITFLGVL 295
V ++ +F + +K++VVW+++ Y + + LE + + PD + + VL
Sbjct: 343 VEAKRLFDSLS--EKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVL 400
Query: 296 KACS 299
ACS
Sbjct: 401 GACS 404
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 41/259 (15%)
Query: 8 SATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT--ALRR 65
S + L+ +T + ++N + D L + + T D V VL +C+ A
Sbjct: 351 SLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYME 410
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
P G IH H+ ++ L + + +A +++Y C ++ A +FD R+ V++NAMI+
Sbjct: 411 P--GKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAG 468
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
AH K+ + M E KP
Sbjct: 469 CAHHGHEA----------------------------------KSFQHFEDMTEGGFKPDE 494
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLG--SGLIEAYGRCGCLVNSRNVF 243
IT +ALL AC + L L E + + P+ G + +I+ YG+ L + +
Sbjct: 495 ITFMALLSACRH-RGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELM 553
Query: 244 WKMRDMDKDVVVWSSLISA 262
+ ++KD V+ + ++A
Sbjct: 554 EGIDQVEKDAVILGAFLNA 572
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 36/274 (13%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G IH K L + +A IN YG LTS+ LF+++ +N V WN MI
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI----- 207
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
+ HL QN A K +A + + +P T
Sbjct: 208 ----------VIHL-------------------QNGLAEKGLAYFNMSRRVGHEPDQATF 238
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
LA+L +C ++ + L + IHG + + + + L++ Y + G L +S VF ++
Sbjct: 239 LAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEI-- 296
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 308
D + W+++++AYA HG + A++ F+ M G+ PD +TF +L ACSH+G ++
Sbjct: 297 TSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGK 356
Query: 309 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
YF M + Y ++ DHYSC+VD+L R+G L +
Sbjct: 357 HYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQD 390
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 143/350 (40%), Gaps = 70/350 (20%)
Query: 1 MASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLV--LK 58
M ++ YS + R LY + ++ S+ LD +V SL+ +K
Sbjct: 1 MIKANVYSCSKFRFLYRRRFLS------------------QSSFVHSLDANVSSLIAAVK 42
Query: 59 SCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVV 118
SC ++ L +H KS + FI L+ Y A LFDE+P R+ V
Sbjct: 43 SCVSIE---LCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVS 99
Query: 119 WNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLE 178
WN++IS Y+ L E+ M + E
Sbjct: 100 WNSLISGYS-GRGYLGKCFEVLSRMMIS-------------------------------E 127
Query: 179 LELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVN 238
+ +P +T L+++ ACV + + IHG ++ ++ ++ + I YG+ G L +
Sbjct: 128 VGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTS 187
Query: 239 SRNVFWKMRDMD-KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA 297
S +F D+ K++V W+++I + +G A+ L F G +PD TFL VL++
Sbjct: 188 SCKLF---EDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRS 244
Query: 298 CSHAGFADDA-----LCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
C G A L F G + + L+D+ S+ GRL +
Sbjct: 245 CEDMGVVRLAQGIHGLIMFG------GFSGNKCITTALLDLYSKLGRLED 288
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 57 LKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNE 116
L+ + LR L +H+ + F + ALIN+YG C + A+ +FD+ H
Sbjct: 244 LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDD-THAQN 302
Query: 117 VVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRM 176
+ N I S AL LF MD
Sbjct: 303 IFLNTTIMDAYFQDKSFEEALNLFSKMDTK------------------------------ 332
Query: 177 LELELKPRLITLLALLPACVNVAALNLIKE---IHGYGIRNDIVPHPQLGSGLIEAYGRC 233
E+ P T LL + +A L+L+K+ +HG +++ H +G+ L+ Y +
Sbjct: 333 ---EVPPNEYTFAILLNS---IAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 234 GCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 293
G + ++R F M +D+V W+++IS + HG + ALE F M G P+ ITF+G
Sbjct: 387 GSIEDARKAFSGM--TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIG 444
Query: 294 VLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
VL+ACSH GF + L YF ++ + + V+ HY+C+V +LS+AG +
Sbjct: 445 VLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKD 493
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 124/304 (40%), Gaps = 53/304 (17%)
Query: 46 LPLDPHVFSLVLKSCTALRRPFLGASIHAH---AAKSSFLSNPFIASALINLYGHCLSLT 102
P+D + +LK C +G SIHAH +SS + + ++LINLY C
Sbjct: 29 FPIDR--LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETV 86
Query: 103 SARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQ 162
AR LFD +P RN V W AM+ Y Q
Sbjct: 87 RARKLFDLMPERNVVSWCAMMKGY-----------------------------------Q 111
Query: 163 NDG-AFKAIALYRRM-LELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHP 220
N G F+ + L++ M E +P + +C N + K+ HG ++ ++ H
Sbjct: 112 NSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHE 171
Query: 221 QLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK----DVVVWSSLISAYALHGEAKAALETF 276
+ + L+ Y C + +R +D D+ V+SS +S Y G K L+
Sbjct: 172 FVRNTLVYMYSLCSGNGEA------IRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVL 225
Query: 277 KEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSR 336
++ + +T+L L+ S+ + AL +RM R +G A + L+++ +
Sbjct: 226 RKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAEVEACGALINMYGK 284
Query: 337 AGRL 340
G++
Sbjct: 285 CGKV 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 112/260 (43%), Gaps = 42/260 (16%)
Query: 7 YSATHSRLLYF-TKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
+ TH++ ++ T ++ ++ ++AL +F + T +P + + F+++L S L
Sbjct: 295 FDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM-DTKEVPPNEYTFAILLNSIAELSL 353
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
G +H KS + ++ + +AL+N+Y S+ AR F + R+ V WN MIS
Sbjct: 354 LKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISG 413
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
+H L + A+ + RM+ P
Sbjct: 414 CSHH----------------------------GLGRE------ALEAFDRMIFTGEIPNR 439
Query: 186 ITLLALLPACVNVAALNLIKEIHGYG---IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNV 242
IT + +L AC ++ + + +H + + D+ P Q + ++ + G ++ +
Sbjct: 440 ITFIGVLQACSHIGFVE--QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAED- 496
Query: 243 FWKMRDMDKDVVVWSSLISA 262
F + ++ DVV W +L++A
Sbjct: 497 FMRTAPIEWDVVAWRTLLNA 516
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 145/330 (43%), Gaps = 38/330 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T +I R +AL +F ++ + F+ V+ +C +G +H
Sbjct: 190 VISWTTMICGLDQNERSGEALDLFKNMLRC-CIKSTSRPFTCVITACANAPAFHMGIQVH 248
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
K FL +++++LI Y +C + +R +FDE H VW A++S Y+
Sbjct: 249 GLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYS------ 302
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
N A++++ ML + P T + L
Sbjct: 303 ----------------------------LNKKHEDALSIFSGMLRNSILPNQSTFASGLN 334
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
+C + L+ KE+HG ++ + +G+ L+ Y G + ++ +VF K+ K +
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI--FKKSI 392
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
V W+S+I A HG K A F +M +PD ITF G+L ACSH GF + F
Sbjct: 393 VSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY 452
Query: 314 MQRDYG-VEASSDHYSCLVDVLSRAGRLHE 342
M ++ HY+C+VD+L R G+L E
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKE 482
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 16/290 (5%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPL-DPHVFSLVLKSCTALRRPFLGASIHAH 75
+TK+IT + +R AL +F +P+ D ++ ++ C +
Sbjct: 69 YTKMITGYTRSNRLVDALNLFDE------MPVRDVVSWNSMISGCVECGDMNTAVKLFDE 122
Query: 76 AAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPA 135
+ S +S +A++N + A LF ++P ++ WN+M+ Y +
Sbjct: 123 MPERSVVS----WTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFG-KVDD 177
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
AL+LF M N ++ +I L QN+ + +A+ L++ ML +K ++ AC
Sbjct: 178 ALKLFKQMP-GKNVISWTTMICGLD-QNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
N A ++ ++HG I+ + + + LI Y C + +SR VF + + V V
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVF--DEKVHEQVAV 293
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
W++L+S Y+L+ + + AL F M + P+ TF L +CS G D
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLD 343
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 147/328 (44%), Gaps = 39/328 (11%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
F+ L+ ++ S+ AL +F + + + + S L + + L S H
Sbjct: 195 FSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF-LSAISDLGDLSGAESAHVLC 253
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K + + +ALI +YG ++SAR +FD ++ V WN MI YA +
Sbjct: 254 IKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKT-----GL 308
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
LE + + L R+M ++KP T + LL +C
Sbjct: 309 LE-----------------------------ECVWLLRQMKYEKMKPNSSTFVGLLSSCA 339
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
A + + + I LG+ L++ Y + G L + +F +M+D KDV W
Sbjct: 340 YSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKD--KDVKSW 397
Query: 257 SSLISAYALHGEAKAALETFKEMEMAG--VKPDGITFLGVLKACSHAGFADDALCYFTRM 314
+++IS Y HG A+ A+ F +ME V+P+ ITFL VL ACSH G + + F RM
Sbjct: 398 TAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRM 457
Query: 315 QRDYGVEASSDHYSCLVDVLSRAGRLHE 342
Y +HY C+VD+L RAG+L E
Sbjct: 458 VEAYSFTPKVEHYGCVVDLLGRAGQLEE 485
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 45/283 (15%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR-NEVVWNAMISLYA 127
G IHA K F + I ++L+ Y + AR +FDE P + N V+W AMIS Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
+N+ + +AI L++RM +++ +
Sbjct: 144 ----------------------------------ENENSVEAIELFKRMEAEKIELDGVI 169
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRND--IVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
+ L AC ++ A+ + +EI+ I+ + L + L+ Y + G +R +F +
Sbjct: 170 VTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE 229
Query: 246 MRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG------VKPDGITFLGVLKACS 299
M KDV ++S+I YAL+G+A+ +LE FK+M+ + P+ +TF+GVL ACS
Sbjct: 230 --SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACS 287
Query: 300 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
H+G ++ +F M DY ++ H+ C+VD+ R+G L +
Sbjct: 288 HSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 162/338 (47%), Gaps = 37/338 (10%)
Query: 6 YYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
+ S L+ + +I + + D + ++F + + P D F +L++ ++
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP-DCFTFGSLLRASIVVKC 229
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISL 125
+ + +H A K F + + +L+N Y C SL +A L + R+ + A+I+
Sbjct: 230 LEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITG 289
Query: 126 YAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
++ QN+ A +++ M+ ++ K
Sbjct: 290 FSQ---------------------------------QNNCTSDAFDIFKDMIRMKTKMDE 316
Query: 186 ITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHP-QLGSGLIEAYGRCGCLVNSRNVFW 244
+ + ++L C +A++ + ++IHG+ +++ + LG+ LI+ Y + G + ++ F
Sbjct: 317 VVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFE 376
Query: 245 KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 304
+M++ KDV W+SLI+ Y HG + A++ + ME +KP+ +TFL +L ACSH G
Sbjct: 377 EMKE--KDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQT 434
Query: 305 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ + M +G+EA +H SC++D+L+R+G L E
Sbjct: 435 ELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEE 472
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 42/286 (14%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I+ H AL +F +H + + + VLKSC L G IH
Sbjct: 81 WTAMISRFSRCGYHPDALLLFKEMHRE-DVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K + N + SAL++LY C + AR FD + R+ V WNAMI Y
Sbjct: 140 EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYT--------- 190
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
N A + +L++ ML KP T +LL A +
Sbjct: 191 -------------------------ANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASI 225
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK--DVV 254
V L ++ E+HG I+ L L+ AY +CG L N+ WK+ + K D++
Sbjct: 226 VVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANA----WKLHEGTKKRDLL 281
Query: 255 VWSSLISAYALHGEAKA-ALETFKEMEMAGVKPDGITFLGVLKACS 299
++LI+ ++ + A + FK+M K D + +LK C+
Sbjct: 282 SCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICT 327
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 112/255 (43%), Gaps = 46/255 (18%)
Query: 48 LDPHVFSLVLKSCT--ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSAR 105
L P ++ LK C+ +++ L IH ++ + F SN + LI+LY + AR
Sbjct: 10 LSPSLYLKALKLCSYQNVKKQLL--LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHAR 67
Query: 106 HLFDEIPHRNEVVWNAMISLYA---HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQ 162
LFD I R+ V W AMIS ++ + PD+L E+ H DV N+ T+ +
Sbjct: 68 KLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEM-HREDVKANQFTYGSV------- 119
Query: 163 NDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQL 222
L +C ++ L +IHG + + + +
Sbjct: 120 -----------------------------LKSCKDLGCLKEGMQIHGSVEKGNCAGNLIV 150
Query: 223 GSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMA 282
S L+ Y RCG + +R F M+ ++D+V W+++I Y + A + F+ M
Sbjct: 151 RSALLSLYARCGKMEEARLQFDSMK--ERDLVSWNAMIDGYTANACADTSFSLFQLMLTE 208
Query: 283 GVKPDGITFLGVLKA 297
G KPD TF +L+A
Sbjct: 209 GKKPDCFTFGSLLRA 223
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 207 IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALH 266
IHG I N + QL LI+ Y + G + ++R +F ++ +DVV W+++IS ++
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISK--RDVVSWTAMISRFSRC 91
Query: 267 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 326
G AL FKEM VK + T+ VLK+C G C MQ VE +
Sbjct: 92 GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLG------CLKEGMQIHGSVEKGNCA 145
Query: 327 -----YSCLVDVLSRAGRLHE 342
S L+ + +R G++ E
Sbjct: 146 GNLIVRSALLSLYARCGKMEE 166
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 161/324 (49%), Gaps = 16/324 (4%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVF----SLVLKSCTALRRPFLGASIHAH 75
+ +++ S QAL + I +P D + F S + K+C G H
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVP-DSYTFVSLISCIEKTCCVDS----GKMCHGQ 143
Query: 76 AAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPA 135
A K + ++L+++Y C +L A+ LF EIP R+ V WN++I+ + D L A
Sbjct: 144 AIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL-A 202
Query: 136 ALELFHLMDVPPNESTFNPIIAA-LAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
A +LF M N ++N +I+A L A N G +I+L+R M+ + TL+ LL A
Sbjct: 203 AHKLFDEMP-DKNIISWNIMISAYLGANNPGV--SISLFREMVRAGFQGNESTLVLLLNA 259
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVV 254
C A L + +H IR + + + LI+ YG+C + +R +F + +K V
Sbjct: 260 CGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK--V 317
Query: 255 VWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 314
W+ +I A+ LHG + LE F+ M ++PD +TF+GVL C+ AG Y++ M
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM 377
Query: 315 QRDYGVEASSDHYSCLVDVLSRAG 338
++ ++ + H C+ ++ S AG
Sbjct: 378 VDEFQIKPNFGHQWCMANLYSSAG 401
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 143/311 (45%), Gaps = 36/311 (11%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D + VL+SC A HA K + + P + + + Y C AR L
Sbjct: 29 DHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRL- 87
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDV--------------PPNESTFNP 154
++W +SL SP L + LM + N T+N
Sbjct: 88 --------LLW--FLSL---SPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNL 134
Query: 155 IIAALA--AQNDGAFKAIALYRRMLEL-ELKPRLITLLALLPACVNVAALNLIKEIHGYG 211
+I Q + A KA+ + ML ++KP + + L AC + L+ K +H
Sbjct: 135 MIGGYVRNVQYEEALKAL---KNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLM 191
Query: 212 IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKA 271
I + I + L S L++ Y +CG + SR VF+ ++ DV +W+++I+ +A HG A
Sbjct: 192 IDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR--NDVSIWNAMITGFATHGLATE 249
Query: 272 ALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLV 331
A+ F EME V PD ITFLG+L CSH G ++ YF M R + ++ +HY +V
Sbjct: 250 AIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMV 309
Query: 332 DVLSRAGRLHE 342
D+L RAGR+ E
Sbjct: 310 DLLGRAGRVKE 320
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 136/273 (49%), Gaps = 11/273 (4%)
Query: 76 AAKSSFLSNPF---IASALINLYGHCLSLTSARHLFDEIPH-RNEVVWNAMISLYAHSPD 131
A+ S L+ F + +IN Y L A LF+ + ++V W +MI Y + D
Sbjct: 356 ASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGD 415
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
+ A LF + + T+ +I+ L QN+ +A +L M+ LKP T L
Sbjct: 416 -VSRAFGLFQKLH-DKDGVTWTVMISGLV-QNELFAEAASLLSDMVRCGLKPLNSTYSVL 472
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQL--GSGLIEAYGRCGCLVNSRNVFWKMRDM 249
L + + L+ K IH + P L + L+ Y +CG + ++ +F KM +
Sbjct: 473 LSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM--V 530
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
KD V W+S+I + HG A AL FKEM +G KP+ +TFLGVL ACSH+G L
Sbjct: 531 QKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLE 590
Query: 310 YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
F M+ Y ++ DHY ++D+L RAG+L E
Sbjct: 591 LFKAMKETYSIQPGIDHYISMIDLLGRAGKLKE 623
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 27/284 (9%)
Query: 63 LRRPFLGASIHAH-----AAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEV 117
LRR G +HA + ++ ++L++ Y L AR LF+ +P RN V
Sbjct: 50 LRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV 109
Query: 118 VWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG-AFKAIALYRRM 176
NAM++ Y + A LF M P N ++ ++ AL +DG + A+ L+ M
Sbjct: 110 TCNAMLTGYVKCR-RMNEAWTLFREM--PKNVVSWTVMLTALC--DDGRSEDAVELFDEM 164
Query: 177 LELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCL 236
E +++ L+ + + K++ D+V + G IE G +
Sbjct: 165 PE----RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDG----M 216
Query: 237 VNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 296
++ +F M +K+VV W+S++ Y +G+ + A F EM + +++ ++
Sbjct: 217 EEAKLLFGDMS--EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAMIS 270
Query: 297 ACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
+ +AL F M++D V+A S + L+ + G L
Sbjct: 271 GFAWNELYREALMLFLEMKKD--VDAVSPNGETLISLAYACGGL 312
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 128/246 (52%), Gaps = 13/246 (5%)
Query: 97 HCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNE-STFNPI 155
HCL + S H + V N++I++Y+ D L A +F V N ST+N I
Sbjct: 343 HCLVIRSC-----SFSHDIDNVRNSLITMYSRCSD-LRHAFIVFQ--QVEANSLSTWNSI 394
Query: 156 IAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRND 215
I+ A N+ + + L + ML P ITL ++LP V L KE H Y +R
Sbjct: 395 ISGFA-YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 216 IVPHPQ-LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALE 274
L + L++ Y + G ++ ++ VF MR DK V ++SLI Y G+ + AL
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK--VTYTSLIDGYGRLGKGEVALA 511
Query: 275 TFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVL 334
FK+M+ +G+KPD +T + VL ACSH+ + FT+M+ +G+ +HYSC+VD+
Sbjct: 512 WFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLY 571
Query: 335 SRAGRL 340
RAG L
Sbjct: 572 CRAGYL 577
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 152/333 (45%), Gaps = 24/333 (7%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
LI S++ R ++++V+ + S + D + V+K+C AL G +H S
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSK-GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVS 213
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
S N ++ +ALI++Y + AR LFD + R+ V WNA+I+ Y S + L A +L
Sbjct: 214 SHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT-SEEKLGEAFKL 272
Query: 140 FHLMDVPPNES---TFNPIIAAL--AAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
M + E+ T+N I A GA + M ++ + ++ L A
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVV---GMRNCNVRIGSVAMINGLKA 329
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPH--PQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
C ++ AL K H IR+ H + + LI Y RC L ++ VF ++
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE--ANS 387
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALC 309
+ W+S+IS +A + ++ KEM ++G P+ IT +L + G + C
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 310 YFTRMQ--RDYGVEASSDHYSCLVDVLSRAGRL 340
Y R Q +D + +S LVD+ +++G +
Sbjct: 448 YILRRQSYKDCLILWNS-----LVDMYAKSGEI 475
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 128/246 (52%), Gaps = 13/246 (5%)
Query: 97 HCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNE-STFNPI 155
HCL + S H + V N++I++Y+ D L A +F V N ST+N I
Sbjct: 343 HCLVIRSC-----SFSHDIDNVRNSLITMYSRCSD-LRHAFIVFQ--QVEANSLSTWNSI 394
Query: 156 IAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRND 215
I+ A N+ + + L + ML P ITL ++LP V L KE H Y +R
Sbjct: 395 ISGFA-YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 216 IVPHPQ-LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALE 274
L + L++ Y + G ++ ++ VF MR DK V ++SLI Y G+ + AL
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDK--VTYTSLIDGYGRLGKGEVALA 511
Query: 275 TFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVL 334
FK+M+ +G+KPD +T + VL ACSH+ + FT+M+ +G+ +HYSC+VD+
Sbjct: 512 WFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLY 571
Query: 335 SRAGRL 340
RAG L
Sbjct: 572 CRAGYL 577
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 152/333 (45%), Gaps = 24/333 (7%)
Query: 20 LITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKS 79
LI S++ R ++++V+ + S + D + V+K+C AL G +H S
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSK-GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVS 213
Query: 80 SFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALEL 139
S N ++ +ALI++Y + AR LFD + R+ V WNA+I+ Y S + L A +L
Sbjct: 214 SHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT-SEEKLGEAFKL 272
Query: 140 FHLMDVPPNES---TFNPIIAAL--AAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
M + E+ T+N I A GA + M ++ + ++ L A
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVV---GMRNCNVRIGSVAMINGLKA 329
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPH--PQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
C ++ AL K H IR+ H + + LI Y RC L ++ VF ++
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE--ANS 387
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG---FADDALC 309
+ W+S+IS +A + ++ KEM ++G P+ IT +L + G + C
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 310 YFTRMQ--RDYGVEASSDHYSCLVDVLSRAGRL 340
Y R Q +D + +S LVD+ +++G +
Sbjct: 448 YILRRQSYKDCLILWNS-----LVDMYAKSGEI 475
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 167/406 (41%), Gaps = 94/406 (23%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKSCTALRRPFLGASIHA 74
+T LIT +V + +F S++ P+ F+L VL SC R G +H
Sbjct: 130 WTALITGYVQAGNEQEGFCLF----SSMLSHCFPNEFTLSSVLTSC----RYEPGKQVHG 181
Query: 75 HAAKSSFLSNPFIASALINLYGHC---LSLTSARHLFDEIPHRNEVVWNAMISLYA---- 127
A K + ++A+A+I++YG C + A +F+ I +N V WN+MI+ +
Sbjct: 182 LALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNL 241
Query: 128 -----------HSPDS-------LPAALELFHLMDVPPNESTFN-------PIIAALAAQ 162
HS L L+ D+ PNE + + + L Q
Sbjct: 242 GKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQ 301
Query: 163 NDGAFKAIALYRRMLE-------------------------------------------- 178
+ A I +Y MLE
Sbjct: 302 TEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAIHLFGQLR 361
Query: 179 -LELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLV 237
+L P T ++L AC + IH I+ + L + LI AY +CG L
Sbjct: 362 QEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLD 421
Query: 238 NSRNVFWKMRDMD-KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLK 296
VF DMD +DVV W+S++ AY+LHG+ + L F++M+ + PD TF+ +L
Sbjct: 422 LCMRVF---DDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLS 475
Query: 297 ACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
ACSHAG ++ L F M +HY+C++D+LSRA R E
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAE 521
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 47/255 (18%)
Query: 31 DQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASA 90
++A+ +F + P D + FS VLK+C L SIHA K FL++ + ++
Sbjct: 351 ERAIHLFGQLRQEKLSP-DWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409
Query: 91 LINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA-HSPDSLPAALELFHLMDVPPNE 149
LI+ Y C SL +FD++ R+ V WN+M+ Y+ H + + L +F MD+ P+
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG--QVDSILPVFQKMDINPDS 467
Query: 150 STFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHG 209
+TF +++A + + + ++R M E KP +
Sbjct: 468 ATFIALLSA-CSHAGRVEEGLRIFRSMFE---KPETL----------------------- 500
Query: 210 YGIRNDIVPHPQLG--SGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHG 267
PQL + +I+ R + V +M MD D VVW +L+ + HG
Sbjct: 501 ----------PQLNHYACVIDMLSRAERFAEAEEVIKQM-PMDPDAVVWIALLGSCRKHG 549
Query: 268 E---AKAALETFKEM 279
K A + KE+
Sbjct: 550 NTRLGKLAADKLKEL 564
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 46/249 (18%)
Query: 51 HVFSLVLKSCTALRRPFLGASIHAHAAKSSFL--SNPFIASALINLYGHCLSLTSARHLF 108
++ + ++C R G ++H H + N +A+ LIN+Y C ++ AR +F
Sbjct: 60 QAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVF 119
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
D +P RN V W A+I+ Y + NE +
Sbjct: 120 DTMPERNVVSWTALITGYVQA-----------------GNEQ-----------------E 145
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
L+ ML P TL ++L +C K++HG ++ + + + +I
Sbjct: 146 GFCLFSSMLS-HCFPNEFTLSSVLTSCRYEPG----KQVHGLALKLGLHCSIYVANAVIS 200
Query: 229 AYGRC---GCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
YGRC + VF ++ K++V W+S+I+A+ K A+ F M GV
Sbjct: 201 MYGRCHDGAAAYEAWTVFEAIK--FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVG 258
Query: 286 PDGITFLGV 294
D T L +
Sbjct: 259 FDRATLLNI 267
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 161/344 (46%), Gaps = 17/344 (4%)
Query: 1 MASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSC 60
+A ++ + + L+ ++ D+A VF I D ++L++ S
Sbjct: 157 LAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEK-----DAVSWNLIISSY 211
Query: 61 TALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWN 120
++ +G + +A L +P + LI Y +C + AR FD +P +N V W
Sbjct: 212 A--KKGDMGNACSLFSAMP--LKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWI 267
Query: 121 AMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE 180
MIS Y D + +A ELF LM ++ ++ +IA QN A+ L+ +MLE
Sbjct: 268 TMISGYTKLGD-VQSAEELFRLMS-KKDKLVYDAMIACYT-QNGKPKDALKLFAQMLERN 324
Query: 181 --LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVN 238
++P ITL +++ A + + + Y + I L + LI+ Y + G
Sbjct: 325 SYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAK 384
Query: 239 SRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+ +F + KD V +S++I ++G A A F M + P+ +TF G+L A
Sbjct: 385 AFKMFSNLNK--KDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAY 442
Query: 299 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
SH+G + F M +D+ +E S+DHY +VD+L RAGRL E
Sbjct: 443 SHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEE 485
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 146/318 (45%), Gaps = 29/318 (9%)
Query: 29 RHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIA 88
+ + + V+ +H++ +P H + VL++C + G IHA A K+ ++
Sbjct: 84 KFKETVDVYIDMHNS-GIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQ 142
Query: 89 SALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPN 148
+ L+ LY + A+ FD+I +N V WN+++ Y S + L A +F +P
Sbjct: 143 TGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE-LDEARRVFD--KIPEK 199
Query: 149 ES-TFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEI 207
++ ++N II++ A + D A +L+ M LK + L+ VN + L +
Sbjct: 200 DAVSWNLIISSYAKKGDMG-NACSLFSAM---PLKSP-ASWNILIGGYVNCREMKLARTY 254
Query: 208 HGYGIRNDIVPHPQLGS--GLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYAL 265
D +P S +I Y + G + ++ +F M DK +V+ ++I+ Y
Sbjct: 255 F------DAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDK--LVYDAMIACYTQ 306
Query: 266 HGEAKAALETFKEM--EMAGVKPDGITFLGVLKACSHAG---FADDALCYFTRMQRDYGV 320
+G+ K AL+ F +M + ++PD IT V+ A S G F Y T ++G+
Sbjct: 307 NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYIT----EHGI 362
Query: 321 EASSDHYSCLVDVLSRAG 338
+ + L+D+ + G
Sbjct: 363 KIDDLLSTSLIDLYMKGG 380
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 39/289 (13%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T +I++ + +A+ +F + + LP + V S +LK+C+ + G +H
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCS-ILKACSEEKALRFGRQVH 307
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
+ K ++ F+ ++L+++Y C ++ R +FD + +RN V W +
Sbjct: 308 SLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTS------------ 355
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
IIAA A + G +AI+L+R M L +T++++L
Sbjct: 356 ---------------------IIAAHAREGFGE-EAISLFRIMKRRHLIANNLTVVSILR 393
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM-DKD 252
AC +V AL L KE+H I+N I + +GS L+ Y +CG SR+ F ++ + +D
Sbjct: 394 ACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCG---ESRDAFNVLQQLPSRD 450
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
VV W+++IS + G AL+ KEM GV+P+ T+ LKAC+++
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANS 499
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 37/282 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I +H + ++A+++F + + + V S +L++C ++ LG +HA
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVS-ILRACGSVGALLLGKELHAQI 411
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K+S N +I S L+ LY C A ++ ++P R+ V W AMIS
Sbjct: 412 IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMIS----------GC 461
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
L H ES +A+ + M++ ++P T + L AC
Sbjct: 462 SSLGH-------ES-----------------EALDFLKEMIQEGVEPNPFTYSSALKACA 497
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
N +L + + IH +N + + +GS LI Y +CG + + VF M +K++V W
Sbjct: 498 NSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP--EKNLVSW 555
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
++I YA +G + AL+ ME G + D F +L C
Sbjct: 556 KAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 37/286 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T +I ++ D+A +F + +F +L C+ LG +H +
Sbjct: 151 WTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNM 210
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K + N + S+L+ Y C LTSA FD + ++ + W A+IS
Sbjct: 211 VKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVIS------------ 257
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
A + + G KAI ++ ML P T+ ++L AC
Sbjct: 258 ---------------------ACSRKGHG-IKAIGMFIGMLNHWFLPNEFTVCSILKACS 295
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
AL +++H ++ I +G+ L++ Y +CG + + R VF M +++ V W
Sbjct: 296 EEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS--NRNTVTW 353
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
+S+I+A+A G + A+ F+ M+ + + +T + +L+AC G
Sbjct: 354 TSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 157/343 (45%), Gaps = 41/343 (11%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSL--VLKS 59
AS + + ++ +T LI V+ H F + + ++P+V +L VL++
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVD---HGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 60 CTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVW 119
C+ LR IHA+ + + ++L++ Y + A ++ + R+ + +
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITY 496
Query: 120 NAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL 179
++++ + + AL + + M DG RM +L
Sbjct: 497 TSLVTRF-NELGKHEMALSVINYM------------------YGDGI--------RMDQL 529
Query: 180 ELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNS 239
L P I+ A N+ AL K +H Y +++ + + L++ Y +CG L ++
Sbjct: 530 SL-PGFIS------ASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 240 RNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
+ VF ++ DVV W+ L+S A +G +AL F+EM M +PD +TFL +L ACS
Sbjct: 583 KKVFEEI--ATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS 640
Query: 300 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ D L YF M++ Y +E +HY LV +L RAGRL E
Sbjct: 641 NGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEE 683
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 137/335 (40%), Gaps = 61/335 (18%)
Query: 10 THSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLG 69
+H + +T +I++ AL++F + ++ T P + FS V++SC LR G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHP-NEFTFSSVVRSCAGLRDISYG 143
Query: 70 ASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS 129
+H K+ F N + S+L +LY C A LF + + + + W MIS
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLV-G 202
Query: 130 PDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI 186
AL+ + M VPPNE TF ++ A + L LE
Sbjct: 203 ARKWREALQFYSEMVKAGVPPNEFTFVKLLGASS---------------FLGLEFG---- 243
Query: 187 TLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
K IH I I + L + L++ Y + F KM
Sbjct: 244 ------------------KTIHSNIIVRGIPLNVVLKTSLVDFYSQ----------FSKM 275
Query: 247 RDM--------DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
D ++DV +W+S++S + + AK A+ TF EM G++P+ T+ +L C
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Query: 299 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDV 333
S D ++ + G E S+D + LVD+
Sbjct: 336 SAVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVDM 369
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 144/339 (42%), Gaps = 45/339 (13%)
Query: 8 SATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF 67
S+ + +T +++ V R +A+ F + S L L + +S +L C+A+R
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRS-LGLQPNNFTYSAILSLCSAVRSLD 342
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHC-LSLTSARHLFDEIPHRNEVVWNAMISLY 126
G IH+ K F + + +AL+++Y C S A +F + N V W +I
Sbjct: 343 FGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI--- 399
Query: 127 AHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI 186
L+D + F L M++ E++P ++
Sbjct: 400 -------------LGLVDHGFVQDCF------------------GLLMEMVKREVEPNVV 428
Query: 187 TLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
TL +L AC + + + EIH Y +R + +G+ L++AY + + NV M
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADD 306
+ +D + ++SL++ + G+ + AL M G++ D ++ G + A ++ G +
Sbjct: 489 K--RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALET 546
Query: 307 AL---CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
CY + G ++ + LVD+ S+ G L +
Sbjct: 547 GKHLHCYSVK----SGFSGAASVLNSLVDMYSKCGSLED 581
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 36/236 (15%)
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
+G IH K L N + + L++LY + +AR LFDE+ HR W MIS +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
S + A ++L+ M+ P T
Sbjct: 101 KSQEFASA----------------------------------LSLFEEMMASGTHPNEFT 126
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
+++ +C + ++ +HG I+ + +GS L + Y +CG + +F ++
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGF 303
+ D + W+ +IS+ + + AL+ + EM AGV P+ TF+ +L A S G
Sbjct: 187 --NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 207 IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALH 266
IH I+ ++ + L + L+ Y + + N+R +F +M + V W+ +ISA+
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH--RTVFAWTVMISAFTKS 102
Query: 267 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY---GVEAS 323
E +AL F+EM +G P+ TF V+++C AG D + Y R+ G E +
Sbjct: 103 QEFASALSLFEEMMASGTHPNEFTFSSVVRSC--AGLRD--ISYGGRVHGSVIKTGFEGN 158
Query: 324 SDHYSCLVDVLSRAGRLHE 342
S S L D+ S+ G+ E
Sbjct: 159 SVVGSSLSDLYSKCGQFKE 177
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 163/369 (44%), Gaps = 52/369 (14%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + L++ +V R + + +F +H + P + F+ L +C L LGA IH
Sbjct: 121 VISWNSLVSGYVQSGRFQEGICLFLELHRSDVFP-NEFSFTAALAACARLHLSPLGACIH 179
Query: 74 AHAAKSSF-LSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDS 132
+ K N + + LI++YG C + A +F + ++ V WNA+++ + +
Sbjct: 180 SKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRN-GK 238
Query: 133 LPAALELFHLMDVPPNESTFNPIIAALAAQND--GAFKAIALYRRMLELELKPRLITLLA 190
L L FH M P+ T+N +I A D AF+ ++ P +
Sbjct: 239 LELGLWFFHQMP-NPDTVTYNELIDAFVKSGDFNNAFQVLSDMP-------NPNSSSWNT 290
Query: 191 LLPACVNVA----ALNLIKEIHGYGIRND---------------IVPHPQL--------- 222
+L VN A ++H G+R D +VP L
Sbjct: 291 ILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLG 350
Query: 223 -------GSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALET 275
S LI+ Y +CG L ++ +FW M K+++VW+ +IS YA +G++ A++
Sbjct: 351 LDSRVVVASALIDMYSKCGMLKHAELMFWTMPR--KNLIVWNEMISGYARNGDSIEAIKL 408
Query: 276 FKEMEMAG-VKPDGITFLGVLKACSHAGFADDA-LCYFTRMQRDYGVEASSDHYSCLVDV 333
F +++ +KPD TFL +L CSH + L YF M +Y ++ S +H L+
Sbjct: 409 FNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRA 468
Query: 334 LSRAGRLHE 342
+ + G + +
Sbjct: 469 MGQRGEVWQ 477
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 45/246 (18%)
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS-- 129
+H + K F+SN ++++L+ Y SL A +FDE+P + + WN+++S Y S
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 130 -PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
+ + LEL H DV PNE +F +AA A L L P
Sbjct: 137 FQEGICLFLEL-HRSDVFPNEFSFTAALAACA-----------------RLHLSP----- 173
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
L AC++ + L E + ++V +G+ LI+ YG+CG + ++ VF M
Sbjct: 174 ---LGACIHSKLVKLGLE------KGNVV----VGNCLIDMYGKCGFMDDAVLVFQHME- 219
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 308
+KD V W++++++ + +G+ + L F +M PD +T+ ++ A +G ++A
Sbjct: 220 -EKDTVSWNAIVASCSRNGKLELGLWFFHQMP----NPDTVTYNELIDAFVKSGDFNNAF 274
Query: 309 CYFTRM 314
+ M
Sbjct: 275 QVLSDM 280
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 24/297 (8%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ ++T +VN + +A F +HS+ + D + S+VL + AL G+ IHA A
Sbjct: 288 WNTILTGYVNSEKSGEATEFFTKMHSS-GVRFDEYSLSIVLAAVAALAVVPWGSLIHACA 346
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K S +ASALI++Y C L A +F +P +N +VWN MIS YA + DS+ A
Sbjct: 347 HKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIE-A 405
Query: 137 LELFHLMD----VPPNESTFNPIIAALAAQNDGAFKAIALYRRML--ELELKPRLITLLA 190
++LF+ + + P+ TF ++ A+ + + + + Y M+ E +KP + +
Sbjct: 406 IKLFNQLKQERFLKPDRFTFLNLL-AVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCS 464
Query: 191 LLPACVNVAALNLIKE-IHGYGIRNDIVPHPQLGSGLIEAYGRCGC---LVNSRNVFWKM 246
L+ A + K+ I +G D V L G C L ++ V KM
Sbjct: 465 LIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRAL-------LGACSARKDLKAAKTVAAKM 517
Query: 247 ---RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGV-KPDGITFLGVLKACS 299
D DKD ++ + + YA H + + K M +GV K G +++ CS
Sbjct: 518 IELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCS 574
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 150 STFNPIIAALAAQNDGAFKAIALYRRMLEL---ELKPRLITLLALLPACVNVAALNLIKE 206
++++ I+ ALA F +I + R +EL KP L+ LL N ++L ++
Sbjct: 22 NSWSTIVPALAR-----FGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQ 76
Query: 207 IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALH 266
+HGY ++ V + +L + L+ Y L ++ VF +M D DV+ W+SL+S Y
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPD--PDVISWNSLVSGYVQS 134
Query: 267 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDH 326
G + + F E+ + V P+ +F L AC+ + C +++ + G+E +
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK-LGLEKGNVV 193
Query: 327 Y-SCLVDVLSRAGRLHE 342
+CL+D+ + G + +
Sbjct: 194 VGNCLIDMYGKCGFMDD 210
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 36/272 (13%)
Query: 71 SIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSP 130
S+HA K + S+ ++ AL+N+Y C+ + SA +F+ I + V +++I+ Y+
Sbjct: 228 SVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCG 287
Query: 131 DSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
+ AL LF + + KP + +
Sbjct: 288 NH-KEALHLFAELRMSGK---------------------------------KPDCVLVAI 313
Query: 191 LLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD 250
+L +C ++ KE+H Y IR + ++ S LI+ Y +CG L + ++F + +
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE-- 371
Query: 251 KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCY 310
K++V ++SLI LHG A A E F E+ G+ PD ITF +L C H+G +
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Query: 311 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
F RM+ ++G+E ++HY +V ++ AG+L E
Sbjct: 432 FERMKSEFGIEPQTEHYVYMVKLMGMAGKLEE 463
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 114/272 (41%), Gaps = 43/272 (15%)
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
IH A S + SA++ Y + A LF IP + +WN MI Y
Sbjct: 128 IHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYG-CCG 186
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
+ LF+LM Q+ G +P T++AL
Sbjct: 187 FWDKGINLFNLM------------------QHRGH---------------QPNCYTMVAL 213
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
++ + L + +H + ++ ++ H +G L+ Y RC C+ ++ +VF + +
Sbjct: 214 TSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS--EP 271
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC---SHAGFADDAL 308
D+V SSLI+ Y+ G K AL F E+ M+G KPD + VL +C S + +
Sbjct: 272 DLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVH 331
Query: 309 CYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
Y R+ G+E S L+D+ S+ G L
Sbjct: 332 SYVIRL----GLELDIKVCSALIDMYSKCGLL 359
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A S + S + L+ + LIT + H +AL +F + + P D + ++VL SC
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKP-DCVLVAIVLGSCA 319
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
L G +H++ + + + SALI++Y C L A LF IP +N V +N+
Sbjct: 320 ELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNS 379
Query: 122 MI---SLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAA 158
+I L+ + + E+ M + P+E TF+ ++
Sbjct: 380 LILGLGLHGFASTAFEKFTEILE-MGLIPDEITFSALLCT 418
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 85/225 (37%), Gaps = 40/225 (17%)
Query: 72 IHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
+H+ KS +P+ A+ L Y L SAR LFD
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFD---------------------- 64
Query: 132 SLPAALELFHLMDVPPNESTF--NPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
V P S F N II A A + ++L+ ++L + +P T
Sbjct: 65 -------------VFPERSVFLWNSIIRAYAKAHQFT-TVLSLFSQILRSDTRPDNFTYA 110
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM 249
L ++ IHG I + + GS +++AY + G +V + +F +
Sbjct: 111 CLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIP-- 168
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGV 294
D D+ +W+ +I Y G + F M+ G +P+ T + +
Sbjct: 169 DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVAL 213
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 155/345 (44%), Gaps = 45/345 (13%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A S + + ++ + LI S + + AL F + P D + S+V+ C+
Sbjct: 188 ALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQP-DEYTVSMVVSICS 246
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA 121
LR G A K FLSN + A I+++ C L + LF E+ + V+ N+
Sbjct: 247 DLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNS 306
Query: 122 MISLYAHSPDSLPAALELFHL---MDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLE 178
MI Y+ AL LF L V P++ TF+ +++++
Sbjct: 307 MIGSYSWHCCG-EDALRLFILAMTQSVRPDKFTFSSVLSSM------------------- 346
Query: 179 LELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVN 238
N L+ ++H I+ + + L+E Y + G +
Sbjct: 347 ------------------NAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDL 388
Query: 239 SRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEM-AGVKPDGITFLGVLKA 297
+ VF K KD++ W+++I A + A +L F ++ M +KPD +T +G+L A
Sbjct: 389 AMGVFAKTDG--KDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVA 446
Query: 298 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
C +AGF ++ + F+ M++ +GV ++HY+C++++L R G ++E
Sbjct: 447 CCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINE 491
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 17/252 (6%)
Query: 53 FSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP 112
FS ++ + P L +HA ++ F+ + + + LY S+ +A LFD+IP
Sbjct: 7 FSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIP 66
Query: 113 HRNEVVWNAMI-SLYAHSPDSLPAALELFHLMDVPPNE-STFNPIIAALAAQNDGAFKAI 170
+N + WN + L+ + L AL+LF M P + ++N +I+ L + + I
Sbjct: 67 DKNTITWNVCLKGLFKNG--YLNNALDLFDEM--PERDVVSWNTMISGLVSCGFHEY-GI 121
Query: 171 ALYRRMLELELKPRLIT--LLALLPACVNVAALNLIKEIHGYGIRNDIVPHP-QLGSGLI 227
++ M E++P T +LA L CV ++IHG I + + + + + ++
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVRHG-----EQIHGNAICSGVSRYNLVVWNSVM 176
Query: 228 EAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
+ Y R G + +VF M D+DVV W+ LI + + G + AL+ F M ++PD
Sbjct: 177 DMYRRLGVFDYALSVFLTME--DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
Query: 288 GITFLGVLKACS 299
T V+ CS
Sbjct: 235 EYTVSMVVSICS 246
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 143/331 (43%), Gaps = 38/331 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + +I + A +F + + D + ++ +L +C+ G S+H
Sbjct: 270 LISWNSMIAGFSKHELKESAFELFIQMQRHW-VETDIYTYTGLLSACSGEEHQIFGKSLH 328
Query: 74 AHAAKSSFLSNPFIASALINLYGH--CLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPD 131
K +ALI++Y ++ A LF+ + ++ + WN++I+ +A
Sbjct: 329 GMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFA---- 384
Query: 132 SLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
Q + A+ + + E+K AL
Sbjct: 385 ------------------------------QKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 414
Query: 192 LPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDK 251
L +C ++A L L ++IH ++ V + + S LI Y +CG + ++R F ++
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISS-KH 473
Query: 252 DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYF 311
V W+++I YA HG + +L+ F +M VK D +TF +L ACSH G + L
Sbjct: 474 STVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL 533
Query: 312 TRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M+ Y ++ +HY+ VD+L RAG +++
Sbjct: 534 NLMEPVYKIQPRMEHYAAAVDLLGRAGLVNK 564
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 43/287 (14%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +I+ + + + + A +F + + + +D + FS +LK +++R LG +H
Sbjct: 69 WNTMISGYTSCGKLEDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLV 127
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K + N ++ S+L+++Y C + A F EI N V WNA+I+ + D + A
Sbjct: 128 IKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRD-IKTA 186
Query: 137 LELFHLMD----VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALL 192
L LM+ V + TF P++ L +D F
Sbjct: 187 FWLLGLMEMKAAVTMDAGTFAPLLTLL---DDPMF------------------------- 218
Query: 193 PACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKD 252
NL+K++H ++ + + + +I +Y CG + +++ VF + KD
Sbjct: 219 --------CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG-SKD 269
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
++ W+S+I+ ++ H ++A E F +M+ V+ D T+ G+L ACS
Sbjct: 270 LISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A S + S L+ + +IT + + A+ F ++ S+ + +D + FS +L+SC+
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS-EIKVDDYAFSALLRSCS 419
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVV-WN 120
L LG IHA A KS F+SN F+ S+LI +Y C + SAR F +I ++ V WN
Sbjct: 420 DLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 479
Query: 121 AMISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAA 158
AMI YA +L+LF M +V + TF I+ A
Sbjct: 480 AMILGYAQHGLG-QVSLDLFSQMCNQNVKLDHVTFTAILTA 519
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 146/329 (44%), Gaps = 37/329 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + +I+ +QA+ ++ + T D + FS + + R G +H
Sbjct: 366 LVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH 425
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
K + + F+ + L+++Y SA+ +FD + R+ V+W MI ++ +S
Sbjct: 426 GQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNS- 484
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
A++ F M N S DG +L +++
Sbjct: 485 ELAVQFFIEMYREKNRS-------------DG--------------------FSLSSVIG 511
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
AC ++A L + H IR + L++ YG+ G + +F + D+
Sbjct: 512 ACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN--PDL 569
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
W+S++ AY+ HG + AL F+++ G PD +T+L +L ACSH G + +
Sbjct: 570 KCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQ 629
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M ++ G++A HYSC+V+++S+AG + E
Sbjct: 630 M-KEQGIKAGFKHYSCMVNLVSKAGLVDE 657
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 115/265 (43%), Gaps = 46/265 (17%)
Query: 46 LPLDPHVFSLV--LKSCTALRRPFLGASIHA---HAAKSSFLSNPFIASALINLYGHCLS 100
+PL+ S+V + C ++ IHA A + +P+ + LI++Y C S
Sbjct: 88 MPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGS 147
Query: 101 LTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIA 157
L AR +FD++PHRN V +NA+ S Y+ +PD A L M V PN STF ++
Sbjct: 148 LEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQ 207
Query: 158 ALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIV 217
A D L+ + +N + L GY N +V
Sbjct: 208 VCAVLED-------------------------VLMGSSLNSQIIKL-----GYS-DNVVV 236
Query: 218 PHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFK 277
LG Y CG L ++R +F + + +D V W+++I + + + L F+
Sbjct: 237 QTSVLG-----MYSSCGDLESARRIFDCVNN--RDAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 278 EMEMAGVKPDGITFLGVLKACSHAG 302
M M+GV P T+ VL CS G
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLG 314
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 37/253 (14%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
+ F+ +++ C L +G+S+++ K + N + ++++ +Y C L SAR +F
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
D + +R+ V WN MI + +L +ND
Sbjct: 258 DCVNNRDAVAWNTMI--------------------------------VGSL--KNDKIED 283
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
+ +R ML + P T +L C + + +L K IH I +D + L + L++
Sbjct: 284 GLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLD 343
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKE-MEMAGVKPD 287
Y CG + + VF ++ + ++V W+S+IS + +G + A+ ++ + M+ +PD
Sbjct: 344 MYCSCGDMREAFYVFGRIH--NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPD 401
Query: 288 GITFLGVLKACSH 300
TF + A +
Sbjct: 402 EYTFSAAISATAE 414
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 42/286 (14%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVF--SLVLKSCTALRRPFLGASIHA 74
+ +I + + + L F ++ L +DP F S+VL C+ L LG IHA
Sbjct: 268 WNTMIVGSLKNDKIEDGLMFFRNM---LMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA 324
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLP 134
S L++ + +AL+++Y C + A ++F I + N V WN++IS
Sbjct: 325 RIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG--------- 375
Query: 135 AALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL-KPRLITLLALLP 193
++N +A+ +YRR+L + +P T A +
Sbjct: 376 -------------------------CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
A K +HG + +G+ L+ Y + +++ VF M++ +DV
Sbjct: 411 ATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKE--RDV 468
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
V+W+ +I ++ G ++ A++ F EM + DG + V+ ACS
Sbjct: 469 VLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACS 514
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 117/228 (51%), Gaps = 5/228 (2%)
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYR 174
+E V N++I++YA D L ++ +LF+ +D N T+N ++AA A G + + L
Sbjct: 481 DEHVKNSLITMYAKCGD-LSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE-EVLKLVS 537
Query: 175 RMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG 234
+M + + L A +A L +++HG ++ + + + Y +CG
Sbjct: 538 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG 597
Query: 235 CLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGV 294
+ + +++ + W+ LISA HG + TF EM G+KP +TF+ +
Sbjct: 598 EIGEVVKML--PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 655
Query: 295 LKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
L ACSH G D L Y+ + RD+G+E + +H C++D+L R+GRL E
Sbjct: 656 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 703
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 37/329 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + L+ S VN R AL + + S+ ++ F+ L +C G +H
Sbjct: 310 LISWNSLMASFVNDGRSLDALGLLCSMISS-GKSVNYVTFTSALAACFTPDFFEKGRILH 368
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
S N I +AL+++YG ++ +R + ++P R+ V WNA+I YA D
Sbjct: 369 GLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP- 427
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
AL F M V S + +++ L+A LLP
Sbjct: 428 DKALAAFQTMRVEGVSSNYITVVSVLSA----------------------------CLLP 459
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
+ L K +H Y + + + LI Y +CG L +S+++F + ++++
Sbjct: 460 GDL----LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD--NRNI 513
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
+ W+++++A A HG + L+ +M GV D +F L A + ++
Sbjct: 514 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ-QLHG 572
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ G E S ++ D+ S+ G + E
Sbjct: 573 LAVKLGFEHDSFIFNAAADMYSKCGEIGE 601
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 38/231 (16%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G IH K F S + + L+ +Y A +F ++P ++ + WN++++ +
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV- 321
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG-AFKAIALYRRMLELELKPRLIT 187
NDG + A+ L M+ +T
Sbjct: 322 ----------------------------------NDGRSLDALGLLCSMISSGKSVNYVT 347
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
+ L AC + +HG + + + + +G+ L+ YG+ G + SR V +M
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+DVV W++LI YA + AL F+ M + GV + IT + VL AC
Sbjct: 408 R--RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 456
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 124/285 (43%), Gaps = 37/285 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T L+ + ++ ++ + ++ + + + + SLV+ SC L+ LG I
Sbjct: 108 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQII 166
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
KS S + ++LI++ G ++ A ++FD++ R+ + WN++ + YA +
Sbjct: 167 GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG--- 223
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
H+ + +F+ +L RR + + TLL++L
Sbjct: 224 -------HIEE---------------------SFRIFSLMRRFHDEVNSTTVSTLLSVLG 255
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
+V + IHG ++ + + L+ Y G V + VF +M KD+
Sbjct: 256 ---HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP--TKDL 310
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+ W+SL++++ G + AL M +G + +TF L AC
Sbjct: 311 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 81/154 (52%), Gaps = 6/154 (3%)
Query: 148 NESTFNPIIAALAAQNDGAF-KAIALYRRMLELELKPRLITLLALLPACVNVAAL-NLIK 205
NE ++N +++ + G + + + +R+M +L +KP + +L+ AC ++
Sbjct: 5 NEVSWNTMMSGIVRV--GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGV 62
Query: 206 EIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYAL 265
++HG+ ++ ++ + + ++ YG G + SR VF +M D++VV W+SL+ Y+
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP--DRNVVSWTSLMVGYSD 120
Query: 266 HGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
GE + ++ +K M GV + + V+ +C
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCG 154
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G +H AKS LS+ ++++A+++LYG ++ +R +F+E+P RN V W +++ Y+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 129 --SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI 186
P+ + + V NE++ + +I++ G K +L R+++ +K L
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC-----GLLKDESLGRQIIGQVVKSGLE 175
Query: 187 TLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
+ LA+ + LI G G + + +F +M
Sbjct: 176 SKLAVENS-------------------------------LISMLGSMGNVDYANYIFDQM 204
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEM 279
++D + W+S+ +AYA +G + + F M
Sbjct: 205 S--ERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 117/228 (51%), Gaps = 5/228 (2%)
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYR 174
+E V N++I++YA D L ++ +LF+ +D N T+N ++AA A G + + L
Sbjct: 498 DEHVKNSLITMYAKCGD-LSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE-EVLKLVS 554
Query: 175 RMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG 234
+M + + L A +A L +++HG ++ + + + Y +CG
Sbjct: 555 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG 614
Query: 235 CLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGV 294
+ + +++ + W+ LISA HG + TF EM G+KP +TF+ +
Sbjct: 615 EIGEVVKML--PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 672
Query: 295 LKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
L ACSH G D L Y+ + RD+G+E + +H C++D+L R+GRL E
Sbjct: 673 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 720
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 37/329 (11%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
L+ + L+ S VN R AL + + S+ ++ F+ L +C G +H
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISS-GKSVNYVTFTSALAACFTPDFFEKGRILH 385
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
S N I +AL+++YG ++ +R + ++P R+ V WNA+I YA D
Sbjct: 386 GLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP- 444
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
AL F M V S + +++ L+A LLP
Sbjct: 445 DKALAAFQTMRVEGVSSNYITVVSVLSA----------------------------CLLP 476
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
+ L K +H Y + + + LI Y +CG L +S+++F + ++++
Sbjct: 477 GDL----LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD--NRNI 530
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTR 313
+ W+++++A A HG + L+ +M GV D +F L A + ++
Sbjct: 531 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ-QLHG 589
Query: 314 MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ G E S ++ D+ S+ G + E
Sbjct: 590 LAVKLGFEHDSFIFNAAADMYSKCGEIGE 618
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 38/231 (16%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G IH K F S + + L+ +Y A +F ++P ++ + WN++++ +
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFV- 338
Query: 129 SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDG-AFKAIALYRRMLELELKPRLIT 187
NDG + A+ L M+ +T
Sbjct: 339 ----------------------------------NDGRSLDALGLLCSMISSGKSVNYVT 364
Query: 188 LLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR 247
+ L AC + +HG + + + + +G+ L+ YG+ G + SR V +M
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+DVV W++LI YA + AL F+ M + GV + IT + VL AC
Sbjct: 425 R--RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 124/285 (43%), Gaps = 37/285 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T L+ + ++ ++ + ++ + + + + SLV+ SC L+ LG I
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSL 133
KS S + ++LI++ G ++ A ++FD++ R+ + WN++ + YA +
Sbjct: 184 GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG--- 240
Query: 134 PAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLP 193
H+ + +F+ +L RR + + TLL++L
Sbjct: 241 -------HIEE---------------------SFRIFSLMRRFHDEVNSTTVSTLLSVLG 272
Query: 194 ACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDV 253
+V + IHG ++ + + L+ Y G V + VF +M KD+
Sbjct: 273 ---HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP--TKDL 327
Query: 254 VVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+ W+SL++++ G + AL M +G + +TF L AC
Sbjct: 328 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 372
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 141 HLMDVPP--NESTFNPIIAALAAQNDGAF-KAIALYRRMLELELKPRLITLLALLPACVN 197
HL D+ P NE ++N +++ + G + + + +R+M +L +KP + +L+ AC
Sbjct: 13 HLFDIMPVRNEVSWNTMMSGIVRV--GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 198 VAAL-NLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
++ ++HG+ ++ ++ + + ++ YG G + SR VF +M D++VV W
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP--DRNVVSW 128
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
+SL+ Y+ GE + ++ +K M GV + + V+ +C
Sbjct: 129 TSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCG 171
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
G +H AKS LS+ ++++A+++LYG ++ +R +F+E+P RN V W +++ Y+
Sbjct: 78 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137
Query: 129 --SPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI 186
P+ + + V NE++ + +I++ G K +L R+++ +K L
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC-----GLLKDESLGRQIIGQVVKSGLE 192
Query: 187 TLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
+ LA+ + LI G G + + +F +M
Sbjct: 193 SKLAVENS-------------------------------LISMLGSMGNVDYANYIFDQM 221
Query: 247 RDMDKDVVVWSSLISAYALHGEAKAALETFKEM 279
++D + W+S+ +AYA +G + + F M
Sbjct: 222 S--ERDTISWNSIAAAYAQNGHIEESFRIFSLM 252
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 124/235 (52%), Gaps = 10/235 (4%)
Query: 65 RPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMIS 124
+PF G+ IH++A ++ SN + ++ G + AR +FD++P R+E WN MI
Sbjct: 14 KPF-GSCIHSYADRTKLHSNLLLGD--LSKSGR---VDEARQMFDKMPERDEFTWNTMIV 67
Query: 125 LYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPR 184
Y++S L A +LF V N ++N +I+ ++ +A L+ M +KP
Sbjct: 68 AYSNSR-RLSDAEKLFRSNPVK-NTISWNALISGYC-KSGSKVEAFNLFWEMQSDGIKPN 124
Query: 185 LITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFW 244
TL ++L C ++ L ++IHG+ I+ + +GL+ Y +C + + +F
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE 184
Query: 245 KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
M + +K+ V W+S+++ Y+ +G A A+E F+++ G + + TF VL AC+
Sbjct: 185 TM-EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACA 238
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 38/280 (13%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ LI+ + +A +F + S P + + VL+ CT+L G IH H
Sbjct: 93 WNALISGYCKSGSKVEAFNLFWEMQSDGIKP-NEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP-HRNEVVWNAMISLYAHSPDSLPA 135
K+ F + + + L+ +Y C ++ A +LF+ + +N V W +M++ Y
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGY--------- 202
Query: 136 ALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPAC 195
+QN AFKAI +R + + T ++L AC
Sbjct: 203 -------------------------SQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 196 VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVV 255
+V+A + ++H +++ + + S LI+ Y +C + ++R + M ++D DVV
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM-EVD-DVVS 295
Query: 256 WSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 295
W+S+I G AL F M +K D T +L
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 148/390 (37%), Gaps = 106/390 (27%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T ++T + +A+ F + + + F VL +C ++ +G +H
Sbjct: 195 WTSMLTGYSQNGFAFKAIECFRDLRREGNQS-NQYTFPSVLTACASVSACRVGVQVHCCI 253
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMI------------- 123
KS F +N ++ SALI++Y C + SAR L + + + V WN+MI
Sbjct: 254 VKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEAL 313
Query: 124 SLYA--HSPD------SLPAALELF-------------HLMDVPPNESTF----NPIIAA 158
S++ H D ++P+ L F H + V +T+ N ++
Sbjct: 314 SMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDM 373
Query: 159 LAAQN--DGAFK----------------------------AIALYRRMLELELKPRLITL 188
A + D A K A+ L+ M + P I
Sbjct: 374 YAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVT 433
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
++L A + L +++HG I++ + + L+ Y +CG L ++ +F M
Sbjct: 434 ASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME- 492
Query: 249 MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDAL 308
+D++ W+ LI YA + G +DA
Sbjct: 493 -IRDLITWTCLIVGYAKN-----------------------------------GLLEDAQ 516
Query: 309 CYFTRMQRDYGVEASSDHYSCLVDVLSRAG 338
YF M+ YG+ +HY+C++D+ R+G
Sbjct: 517 RYFDSMRTVYGITPGPEHYACMIDLFGRSG 546
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 36/180 (20%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ +T L+T + + +D+AL +F ++ P D V + VL + L G +H
Sbjct: 395 VISWTALVTGNTHNGSYDEALKLFCNMRVGGITP-DKIVTASVLSASAELTLLEFGQQVH 453
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHS---- 129
+ KS F S+ + ++L+ +Y C SL A +F+ + R+ + W +I YA +
Sbjct: 454 GNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLE 513
Query: 130 ------------------PDSLPAALELF-------------HLMDVPPNESTFNPIIAA 158
P+ ++LF H M+V P+ + + I+AA
Sbjct: 514 DAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAA 573
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Query: 172 LYRRMLELELK---PRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
LY+ +EL K P + L +C N+ +L K++H + +++ P+L + +I
Sbjct: 220 LYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVIS 279
Query: 229 AYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 288
+G C + +++ VF M +DKD+ W ++ AY+ +G AL F+EM G+KP+
Sbjct: 280 MFGECSSITDAKRVFDHM--VDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 289 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
TFL V AC+ G ++A +F M+ ++G+ ++HY ++ VL + G L E
Sbjct: 338 ETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVE 391
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 48/244 (19%)
Query: 49 DPHVFSLVLKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLF 108
D F L+ +SC L+ +H H +S F +P + + +I+++G C S+T A+ +F
Sbjct: 235 DRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVF 294
Query: 109 DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFK 168
D + ++ W+ M+ Y + N
Sbjct: 295 DHMVDKDMDSWHLMMCAY----------------------------------SDNGMGDD 320
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKE--IHGYGIRND--IVPHPQLGS 224
A+ L+ M + LKP T L + AC V I+E +H ++N+ I P +
Sbjct: 321 ALHLFEEMTKHGLKPNEETFLTVFLACATVGG---IEEAFLHFDSMKNEHGISPKTEHYL 377
Query: 225 GLIEAYGRCGCLVNSRNVFWKMRDM--DKDVVVWSSLISAYALHGEAKAALETFKEMEMA 282
G++ G+CG LV + +RD+ + W ++ + LHG+ LE + E M
Sbjct: 378 GVLGVLGKCGHLVEAEQY---IRDLPFEPTADFWEAMRNYARLHGDID--LEDYMEELMV 432
Query: 283 GVKP 286
V P
Sbjct: 433 DVDP 436
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 69 GASIHAHAAKSSF-LSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYA 127
G IH + K F +S+ + SALI++YG C + ++ L+ +P N N++++
Sbjct: 334 GKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLM 393
Query: 128 HSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPR 184
H + +E+F LM +E T + ++ AL+
Sbjct: 394 HCGIT-KDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS---------------------- 430
Query: 185 LITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFW 244
LP ++ L +H I++ + LI+AY + G SR VF
Sbjct: 431 -------LPESLHSCTL-----VHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD 478
Query: 245 KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFA 304
++ ++ +S+I+ YA +G ++ +EM+ + PD +T L VL CSH+G
Sbjct: 479 ELDT--PNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLV 536
Query: 305 DDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 338
++ F ++ YG+ Y+C+VD+L RAG
Sbjct: 537 EEGELIFDSLESKYGISPGRKLYACMVDLLGRAG 570
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 107/249 (42%), Gaps = 38/249 (15%)
Query: 53 FSLVLKSCTALRRPFLGASIHAHAAKSSF-LSNPFIASALINLYGHCLSLTSARHLFDEI 111
+ +++ C+ R + G +H+ KS + +SN F+A+ L++ Y C L+ + F+ +
Sbjct: 216 YCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAV 275
Query: 112 PHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIA 171
P ++ + WN+++S+ A L +L+LF M + P
Sbjct: 276 PEKDVISWNSIVSVCADYGSVLD-SLDLFSKMQFWGKRPSIRP----------------- 317
Query: 172 LYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI-VPHPQLGSGLIEAY 230
++ L C + + K+IH Y ++ V + S LI+ Y
Sbjct: 318 ----------------FMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMY 361
Query: 231 GRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGIT 290
G+C + NS ++ + ++ + +SL+++ G K +E F M G D +T
Sbjct: 362 GKCNGIENSALLYQSLPCLNLECC--NSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVT 419
Query: 291 FLGVLKACS 299
VLKA S
Sbjct: 420 LSTVLKALS 428
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 112/281 (39%), Gaps = 59/281 (20%)
Query: 69 GASIHAHAAKSSFLSNPFIASALINLYGHCLSLTS-ARHLFDEIPHRNEVVWNAMISLYA 127
G +H F N F+ SAL+ LY CL L A LFDE+ RN V N ++ +
Sbjct: 131 GIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDEMLDRNLAVCNLLLRCFC 189
Query: 128 HSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELE-LKPRLI 186
+ +S + +Y RM ELE + +
Sbjct: 190 QTGESK----------------------------------RLFEVYLRM-ELEGVAKNGL 214
Query: 187 TLLALLPACVNVAALNLIKEIH------GYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
T ++ C + + K++H G+ I N V + L++ Y CG L S
Sbjct: 215 TYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANV-----LVDYYSACGDLSGSM 269
Query: 241 NVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSH 300
F + + KDV+ W+S++S A +G +L+ F +M+ G +P F+ L CS
Sbjct: 270 RSFNAVPE--KDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSR 327
Query: 301 AGFADDAL---CYFTRMQRDYGVEASSDHY-SCLVDVLSRA 337
CY +M G + SS H S L+D+ +
Sbjct: 328 NSDIQSGKQIHCYVLKM----GFDVSSLHVQSALIDMYGKC 364
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 122/295 (41%), Gaps = 39/295 (13%)
Query: 53 FSLV--LKSCTALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDE 110
FSL + +C + + IH K NP I +AL+++ C + A +FD+
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 111 IPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAI 170
P + DS A II A +N KA+
Sbjct: 478 WPS---------------NLDSSKAT----------------TSIIGGYA-RNGLPDKAV 505
Query: 171 ALYRRML-ELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEA 229
+L+ R L E +L ++L +L C + + +IH Y ++ LG+ LI
Sbjct: 506 SLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISM 565
Query: 230 YGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGI 289
Y +C ++ +F MR+ DV+ W+SLIS Y L AL + M +KPD I
Sbjct: 566 YAKCCDSDDAIKIFNTMRE--HDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDII 623
Query: 290 TFLGVLKACSHAGFADDALC--YFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
T V+ A + + C F M+ Y +E +++HY+ V VL G L E
Sbjct: 624 TLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEE 678
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 139/338 (41%), Gaps = 60/338 (17%)
Query: 6 YYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRR 65
+ S + ++ +T LI+ + +AL VF + + + + F +L +C + R
Sbjct: 137 FVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSR 196
Query: 66 PFLGASIHAHAAKSSFLSNPFIASALINLYGH--CLSLTSARHLFDEIPHRNEVVWNAMI 123
LG IH KS FL++ F++++L++LY S LFDEIP R+ WN ++
Sbjct: 197 FSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVV 256
Query: 124 SLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKP 183
S S A +LF+ M+ + +
Sbjct: 257 SSLVKEGKS-HKAFDLFYEMNR----------VEGFGVDS-------------------- 285
Query: 184 RLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVF 243
TL LL +C + + L +E+HG IR ++ + + LI Y + F
Sbjct: 286 --FTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSK----------F 333
Query: 244 WKMRD--------MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVL 295
W M+ M +D V ++ +I+AY G +A+E F + + + IT+ ++
Sbjct: 334 WDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV----TEKNTITYNALM 389
Query: 296 KACSHAGFADDALCYFTRM-QRDYGVEASSDHYSCLVD 332
G AL FT M QR GVE + + VD
Sbjct: 390 AGFCRNGHGLKALKLFTDMLQR--GVELTDFSLTSAVD 425
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 131/290 (45%), Gaps = 4/290 (1%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ +++S V + + +A +F+ ++ +D S +L SCT G +H A
Sbjct: 252 WNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRA 311
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
+ + + +ALI Y + L++ + ++ V + MI+ Y S + +A
Sbjct: 312 IRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM-SFGMVDSA 370
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
+E+F + N T+N ++A +N KA+ L+ ML+ ++ +L + + AC
Sbjct: 371 VEIFANV-TEKNTITYNALMAGFC-RNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACG 428
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVW 256
V+ + ++IHG+ I+ +P + + L++ RC + ++ +F +
Sbjct: 429 LVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKAT 488
Query: 257 SSLISAYALHGEAKAALETF-KEMEMAGVKPDGITFLGVLKACSHAGFAD 305
+S+I YA +G A+ F + + + D ++ +L C GF +
Sbjct: 489 TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFRE 538
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 50/264 (18%)
Query: 18 TKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAA 77
T +I + D+A+++FH L LD +L+L C L +G IH +A
Sbjct: 489 TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYAL 548
Query: 78 KSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAAL 137
K+ + S+ + ++LI++Y C A +F+ + + + WN++IS Y
Sbjct: 549 KAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY----------- 597
Query: 138 ELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVN 197
Q +G +A+AL+ RM E E+KP +ITL ++ A
Sbjct: 598 ----------------------ILQRNGD-EALALWSRMNEKEIKPDIITLTLVISAFRY 634
Query: 198 VAALNL---------IKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
+ L +K I+ DI P + + + G G L + + M
Sbjct: 635 TESNKLSSCRDLFLSMKTIY------DIEPTTEHYTAFVRVLGHWGLLEEAEDTINSM-P 687
Query: 249 MDKDVVVWSSLISAYALHGEAKAA 272
+ +V V +L+ + +H A
Sbjct: 688 VQPEVSVLRALLDSCRIHSNTSVA 711
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 148/336 (44%), Gaps = 22/336 (6%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+T LI++ N R+ +A+ VF + P ++++L + P+ +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPT-LITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 77 AKSSFLS-NPFIASALINLYGHCLSLTSARHLFDEIP----HRNEVVWNAMISLY--AHS 129
KS ++ + + + LI A +F+E+ ++V +NA++ +Y +H
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 130 PDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAF-KAIALYRRMLELELKPRLITL 188
P L L P+ T+N +I+A A DG +A+ L +M E KP + T
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYA--RDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 189 LALLPACVNV----AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFW 244
LL +A+++ +E+ G + +I + I+ YG G +F
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF----NAFIKMYGNRGKFTEMMKIFD 443
Query: 245 KMR--DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
++ + D+V W++L++ + +G FKEM+ AG P+ TF ++ A S G
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 303 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 338
+ A+ + RM D GV Y+ ++ L+R G
Sbjct: 504 SFEQAMTVYRRML-DAGVTPDLSTYNTVLAALARGG 538
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 20/277 (7%)
Query: 79 SSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR----NEVVWNAMISLYAHSPDSLP 134
S L N +A +I++ G ++SA ++F+ + + + ++IS +A+S
Sbjct: 168 QSMLDNSVVA-IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS-GRYR 225
Query: 135 AALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLAL 191
A+ +F M+ P T+N I+ K +L +M + P T L
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 192 LPAC----VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM- 246
+ C ++ A + +E+ G D V + + L++ YG+ + V +M
Sbjct: 286 ITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY----NALLDVYGKSHRPKEAMKVLNEMV 341
Query: 247 -RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFAD 305
+V ++SLISAYA G A+E +M G KPD T+ +L AG +
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 306 DALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
A+ F M R+ G + + ++ + + G+ E
Sbjct: 402 SAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTE 437
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 120/295 (40%), Gaps = 14/295 (4%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
+ LIT S H +A VF + + D ++ +L RP +
Sbjct: 282 YNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNE----VVWNAMISLYAHSPDS 132
+ F + ++LI+ Y L A L +++ + + ++S + +
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA-GK 399
Query: 133 LPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAF-KAIALYRRMLELELKPRLITL 188
+ +A+ +F M PN TFN I N G F + + ++ + L P ++T
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYG--NRGKFTEMMKIFDEINVCGLSPDIVTW 457
Query: 189 LALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD 248
LL + + + R VP + + LI AY RCG + V+ +M D
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 249 --MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
+ D+ ++++++A A G + + + EME KP+ +T+ +L A ++
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 161/344 (46%), Gaps = 31/344 (9%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
FT+++T ++ D + ++H + + L + D + F++++ R L ++
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMEN-LGISHDLYSFTILIHCFCRCSRLSLALALLGKM 140
Query: 77 AKSSFLSNPFIASALINLYGHC--------LSLTSARHLFDEIPHRNEVVWNAMISLYAH 128
K F + +L+N G C +SL + F +P N V++N +I+
Sbjct: 141 MKLGFRPSIVTLGSLLN--GFCQGNRFQEAVSLVDSMDGFGFVP--NVVIYNTVINGLCK 196
Query: 129 SPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAF-KAIALYRRMLELELKPR 184
+ D L ALE+F+ M+ + + T+N +I+ L+ N G + A L R M++ ++ P
Sbjct: 197 NRD-LNNALEVFYCMEKKGIRADAVTYNTLISGLS--NSGRWTDAARLLRDMVKRKIDPN 253
Query: 185 LITLLALLPACVN----VAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
+I AL+ V + A NL KE+ IR +VP+ + LI + GCL +++
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEM----IRRSVVPNVFTYNSLINGFCIHGCLGDAK 309
Query: 241 NVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+F M + DVV +++LI+ + + ++ F EM G+ D T+ ++
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 369
Query: 299 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
AG + A F RM D GV Y+ L+D L G++ +
Sbjct: 370 CQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEK 412
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 153/344 (44%), Gaps = 25/344 (7%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ FTKL+ + D + + H+ + + D + +L++ +P+L +S
Sbjct: 72 IIDFTKLLNVIAKMKKFDVVINLCDHLQ-IMGVSHDLYTCNLLMNCFCQSSQPYLASSFL 130
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAM---ISLYAHSP 130
K F + ++LIN G CL + + + N++V + + +Y
Sbjct: 131 GKMMKLGFEPDIVTFTSLIN--GFCL----GNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 131 DSLPA------ALELFHLMD---VPPNESTFNPIIAALAAQNDGAFK-AIALYRRMLELE 180
DSL AL LF M+ + P+ + ++ L N G ++ A +L R M + +
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC--NSGRWRDADSLLRGMTKRK 242
Query: 181 LKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
+KP +IT AL+ A V +E++ IR I P+ + LI + GC+ +R
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 241 NVFWKMRDMD--KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKAC 298
+F+ M DVV ++SLI+ + + A++ F EM G+ + IT+ +++
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 299 SHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G + A F+ M GV + Y+ L+ L G++ +
Sbjct: 363 GQVGKPNVAQEVFSHMV-SRGVPPNIRTYNVLLHCLCYNGKVKK 405
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
+A+ L+ M+E P +I LL N+I ++ + + ++ H Q+ G+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLL---------NVIAKMKKFDVVINLCDHLQI-MGVS 104
Query: 228 EAYGRCGCLVN----------SRNVFWKMRDM--DKDVVVWSSLISAYALHGEAKAALET 275
C L+N + + KM + + D+V ++SLI+ + L + A+
Sbjct: 105 HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 276 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 335
+M G+KPD + + ++ + G + AL F +M+ +YG+ Y+ LV+ L
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME-NYGIRPDVVMYTSLVNGLC 223
Query: 336 RAGRLHE 342
+GR +
Sbjct: 224 NSGRWRD 230
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 185 LITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSG--LIEAYGRCGCLVNSRNV 242
L LL L C L K +HG + V H L S L+E Y CG + +V
Sbjct: 254 LSRLLRLAKICGEAEGLQEAKTVHGK--ISASVSHLDLSSNHVLLEMYSNCGLANEAASV 311
Query: 243 FWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
F KM + K++ W +I +A +G + A++ F + G PDG F G+ AC G
Sbjct: 312 FEKMSE--KNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLG 369
Query: 303 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
D+ L +F M RDYG+ S + Y LV++ + G L E
Sbjct: 370 DVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDE 409
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 16/271 (5%)
Query: 79 SSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRN----EVVWNAMISLYAHSPDSLP 134
+ F N ++ + L+N + +++ A+ +FDEI R+ V +N +I+ Y + L
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN-LD 292
Query: 135 AALELFHLMD---VPPNESTFNPIIAALAAQN--DGAFKAIALYRRMLELELKPRLITLL 189
L H M+ P+ T++ +I AL +N DGA L+ M + L P +
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH---GLFDEMCKRGLIPNDVIFT 349
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--R 247
L+ ++L+KE + + + P L + L+ + + G LV +RN+ M R
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 307
+ D + +++LI + G+ + ALE KEM+ G++ D + F ++ G DA
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 308 LCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 338
M R G++ Y+ ++D + G
Sbjct: 470 ERALREMLR-AGIKPDDVTYTMMMDAFCKKG 499
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 183 PRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNV 242
PRL + L C + AL K +H + + + + +IE Y CG + ++ V
Sbjct: 182 PRLFWIAQL---CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTV 238
Query: 243 FWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
F M + +++ W +I +A +G+ + A++TF + G KPDG F + AC G
Sbjct: 239 FNSMPE--RNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLG 296
Query: 303 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ L +F M ++YG+ +HY LV +L+ G L E
Sbjct: 297 DMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDE 336
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 157/341 (46%), Gaps = 28/341 (8%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHV--FSLVLKSCTALRRPFLG-ASIH 73
F+ LI+++ H++A++VF+ + L P++ ++ V+ +C F A
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKE---YGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR----NEVVWNAMISLYAHS 129
++ + ++L+ + +AR+LFDE+ +R + +N ++
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 130 PDSLPAALELFHLMDVP---PNESTFNPIIAALAAQNDGAF-KAIALYRRMLELELKPRL 185
+ A E+ M V PN +++ +I A G F +A+ L+ M L +
Sbjct: 388 -GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKA--GRFDEALNLFGEMRYLGIALDR 444
Query: 186 ITLLALLPACVNVA----ALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
++ LL V AL++++E+ GI+ D+V + + L+ YG+ G +
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY----NALLGGYGKQGKYDEVKK 500
Query: 242 VFWKMRD--MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
VF +M+ + +++ +S+LI Y+ G K A+E F+E + AG++ D + + ++ A
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 300 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
G A+ M ++ G+ + Y+ ++D R+ +
Sbjct: 561 KNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATM 600
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 48/301 (15%)
Query: 87 IASALINLYGHCLSLTSARHLFDEI---PHRNEV-VWNAMISLYAHSPDSLPAALELFHL 142
+ASA+I+ G +T A+ +F+ + N V ++A+IS Y S A+ +F+
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRS-GLHEEAISVFNS 293
Query: 143 MD---VPPNESTFNPIIAALAAQNDGAFKAIA-LYRRMLELELKPRLITLLALLPACVN- 197
M + PN T+N +I A + FK +A + M ++P IT +LL C
Sbjct: 294 MKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 198 ---VAALNLIKEIHGYGIRND-------------------------------IVPHPQLG 223
AA NL E+ I D I+P+
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 224 SGLIEAYGRCGCLVNSRNVFWKMR--DMDKDVVVWSSLISAYALHGEAKAALETFKEMEM 281
S +I+ + + G + N+F +MR + D V +++L+S Y G ++ AL+ +EM
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 282 AGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
G+K D +T+ +L G D+ FT M+R++ V + YS L+D S+ G
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSKGGLYK 531
Query: 342 E 342
E
Sbjct: 532 E 532
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 221 QLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKE 278
+L S +I GR G + ++ +F V +S+LISAY G + A+ F
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 279 MEMAGVKPDGITFLGVLKACSHAGFADDALC-YFTRMQRDYGVEASSDHYSCLVDVLSRA 337
M+ G++P+ +T+ V+ AC G + +F MQR+ GV+ ++ L+ V SR
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRG 352
Query: 338 G 338
G
Sbjct: 353 G 353
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 155/385 (40%), Gaps = 52/385 (13%)
Query: 6 YYSATHSR----LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
+ HSR ++ FT+L++ +R+D +++F + L +P ++V+
Sbjct: 71 FTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ-ILGIPPLLCTCNIVMHCVC 129
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIP----HRNEV 117
+P + K F + ++L+N Y H + A LFD+I N V
Sbjct: 130 LSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVV 189
Query: 118 VWNAMISLYAHSPDSLPAALELFHLMDVP---PNESTFNPIIAALAAQNDGAFKAIALYR 174
+ +I + L A+ELF+ M PN T+N ++ L A L R
Sbjct: 190 TYTTLIRCLCKN-RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG-DAAWLLR 247
Query: 175 RMLELELKPRLITLLALLPACVNVAALNLIKEIHG-----------------------YG 211
M++ ++P +IT AL+ A V V L KE++ YG
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 212 I------------RNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWS 257
+ RN P+ + + LI + + + + +F++M + + + + ++
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 258 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 317
LI Y L G A E F +M PD T+ +L G + AL F M R
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM-RK 426
Query: 318 YGVEASSDHYSCLVDVLSRAGRLHE 342
++ + Y+ ++ + + G++ +
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVED 451
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 18/260 (6%)
Query: 89 SALINLYGHCLSLTSARHLFDEIPHR----NEVVWNAMISLYAHSPDSLPAALELFHLM- 143
S LI+ Y L LF + H+ + VV+++ I +Y S D A++ ++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 144 -DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA---CVNV- 198
+ PN T+ +I L Q+ ++A +Y ++L+ ++P ++T +L+ C N+
Sbjct: 385 QGISPNVVTYTILIKGLC-QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVW 256
+ L +++ G D+V + L GL + G ++++ KM + + +VVV+
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGL----SKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
+SLI + AL+ F+ M + G+KPD TF V++ G ++AL F RM +
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 317 DYGVEASSDHYSCLVDVLSR 336
G+E + Y L+D +
Sbjct: 560 -MGLEPDALAYCTLIDAFCK 578
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 20/284 (7%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
FT ++ + + R ++AL +F + + L D + ++ + +P +G +
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDE-IPHRNE---VVWNAMISLYAHSPDS 132
++ ++ + + +I+L C + A F+ I + E V +N MI Y S
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC-SLRR 651
Query: 133 LPAALELFHLMDVPP---NESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT-- 187
L A +F L+ V P N T +I L ND AI ++ M E KP +T
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD-GAIRMFSIMAEKGSKPNAVTYG 710
Query: 188 -LLALLPACVNV-AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWK 245
L+ V++ + L +E+ GI IV + S +I+ + G + + N+F +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY----SIIIDGLCKRGRVDEATNIFHQ 766
Query: 246 MRDMD--KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
D DVV ++ LI Y G A ++ M GVKPD
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 169/408 (41%), Gaps = 83/408 (20%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF-LGASI 72
++ F+KL+++ ++ D +++ + + L +P + + +S+++ +C R L ++
Sbjct: 81 IIEFSKLLSAIAKMNKFDVVISLGEQMQN-LGIPHNHYTYSILI-NCFCRRSQLPLALAV 138
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEI----PHRNEVVWNAMI-SLYA 127
K + N S+L+N Y H ++ A L D++ N V +N +I L+
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 128 HSPDSLPAAL-ELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI 186
H+ S AL + P+ T+ ++ L + D A L +M + +L+P ++
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL-AFNLLNKMEQGKLEPGVL 257
Query: 187 TLLALLPACVNVA----ALNLIKEIHGYGIRNDIVPHPQL-------------------- 222
++ ALNL KE+ GIR ++V + L
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 223 -----------GSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHG-- 267
S LI+A+ + G LV + ++ +M R +D +V +SSLI+ + +H
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 268 -EAKA--------------------------------ALETFKEMEMAGVKPDGITFLGV 294
EAK +E F+EM G+ + +T+ +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 295 LKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ AG D A F M D GV + Y+ L+D L + G+L +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEK 484
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 115/250 (46%), Gaps = 10/250 (4%)
Query: 101 LTSARHLFDEIPHR----NEVVWNAMISLYAHSPDSLPAALELFHLMD--VPPNESTFNP 154
+ A +LF E+ + N V ++++IS + A+ L +++ + P+ TF+
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 155 IIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRN 214
+I A + +A LY M++ + P ++T +L+ L+ K++ + +
Sbjct: 332 LIDAFVKEGK-LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 215 DIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAA 272
P + LI+ + + + VF +M R + + V ++ LI G+ A
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 273 LETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVD 332
E FKEM GV P+ +T+ +L G + A+ F +QR +E + Y+ +++
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIE 509
Query: 333 VLSRAGRLHE 342
+ +AG++ +
Sbjct: 510 GMCKAGKVED 519
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 152/391 (38%), Gaps = 74/391 (18%)
Query: 8 SATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF 67
S RL+ F++L + ++D L + + + + + S+++ C R+
Sbjct: 66 SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK-GIAHNLYTLSIMINCCCRCRKLS 124
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLS--LTSARHLFD---EIPHRNEVV-WNA 121
L S K + + S LIN G CL ++ A L D E+ H+ ++ NA
Sbjct: 125 LAFSAMGKIIKLGYEPDTVTFSTLIN--GLCLEGRVSEALELVDRMVEMGHKPTLITLNA 182
Query: 122 MISLYAHSPDSLPAALELFHLMDV--PPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL 179
+++ + A L + +++ PNE T+ P++ + A A+ L R+M E
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL-AMELLRKMEER 241
Query: 180 ELKPRLITLLALLPACVNVAAL----NLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGC 235
++K + ++ +L NL E+ G + DI+ + L G A GR
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA-GR--- 297
Query: 236 LVNSRNVFWK-----MRDMDK-----DVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
W +RDM K DVV +S+LI + G+ + A E KEM G+
Sbjct: 298 --------WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 286 PDGITF---------------------LGVLKACS--------------HAGFADDALCY 310
PD +T+ L V K C A DD L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 311 FTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
F +M GV A + Y+ L+ G+L
Sbjct: 410 FRKMSL-RGVVADTVTYNTLIQGFCELGKLE 439
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA-CVNVA---ALN 202
P+ TF+ +I L + + +A+ L RM+E+ KP LITL AL+ C+N A+
Sbjct: 140 PDTVTFSTLINGLCLEGRVS-EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 203 LIKEIHGYGIR-NDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSL 259
LI + G + N++ P +++ + G + + KM R + D V +S +
Sbjct: 199 LIDRMVETGFQPNEVTYGP-----VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 260 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDY- 318
I G A F EME+ G K D I + +++ +AG DD ++ RD
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG----AKLLRDMI 309
Query: 319 --GVEASSDHYSCLVDVLSRAGRLHE 342
+ +S L+D + G+L E
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLRE 335
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 170/408 (41%), Gaps = 83/408 (20%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPF-LGASI 72
++ F KL+++ ++ D +++ + + L + D + +++++ +C R L ++
Sbjct: 80 IVEFNKLLSAIAKMNKFDLVISLGERMQN-LRISYDLYSYNILI-NCFCRRSQLPLALAV 137
Query: 73 HAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEI----PHRNEVVWNAMI-SLYA 127
K + + S+L+N Y H ++ A L D++ N V +N +I L+
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 128 HSPDSLPAAL-ELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLI 186
H+ S AL + P+ T+ ++ L + D A++L ++M + +++ ++
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL-ALSLLKKMEKGKIEADVV 256
Query: 187 TLLALLPACVNVA----ALNLIKEIHGYGIRNDIV------------------------- 217
++ A N ALNL E+ GIR ++V
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 218 ------PHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHG-- 267
P+ S LI+A+ + G LV + ++ +M R +D D+ +SSLI+ + +H
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 268 -EAK--------------------------------AALETFKEMEMAGVKPDGITFLGV 294
EAK +E F+EM G+ + +T+ +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 295 LKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
++ AG D A F +M D GV YS L+D L + G+L +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEK 483
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 127/283 (44%), Gaps = 10/283 (3%)
Query: 68 LGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR----NEVVWNAMI 123
L S+ K ++ I + +I+ + ++ A +LF E+ ++ N V +N++I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 124 SLYAHSPDSLPAALELFHLMD--VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELEL 181
+ A+ L +++ + PN TF+ +I A + +A LY M++ +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK-LVEAEKLYDEMIKRSI 356
Query: 182 KPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRN 241
P + T +L+ L+ K + I D P+ + LI+ + + +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 242 VFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACS 299
+F +M R + + V +++LI G+ A + FK+M GV PD IT+ +L
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 300 HAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G + AL F +Q+ +E Y+ +++ + +AG++ +
Sbjct: 477 KYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVED 518
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 14/234 (5%)
Query: 117 VVWNAMIS---LYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAI 170
V++N +I Y H D AL LF M+ + PN T++ +I+ L + + A
Sbjct: 261 VIFNTIIDSLCKYRHVDD----ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS-DAS 315
Query: 171 ALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAY 230
L M+E ++ P L+T AL+ A V ++++ I+ I P + L+ +
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 231 GRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 288
L ++ +F M +D DVV +++LI + + E F+EM G+ D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 289 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+T+ +++ H G D+A F +M D GV YS L+D L G+L +
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEK 488
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 14/252 (5%)
Query: 101 LTSARHLFDEIPHR----NEVVWNAMISL---YAHSPDSLPAALELFHLMDVPPNESTFN 153
+ A +LF E+ + N V ++++IS Y D+ ++ + PN TFN
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFN 334
Query: 154 PIIAALAAQNDGAF-KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGI 212
+I A + G F +A LY M++ + P + T +L+ L+ K++ + +
Sbjct: 335 ALIDAFVKE--GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 213 RNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAK 270
D P + LI+ + + + + +F +M R + D V +++LI G+
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 271 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 330
A + FK+M GV PD +T+ +L + G + AL F MQ+ ++ Y+ +
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKLDIYIYTTM 511
Query: 331 VDVLSRAGRLHE 342
++ + +AG++ +
Sbjct: 512 IEGMCKAGKVDD 523
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 90/181 (49%), Gaps = 13/181 (7%)
Query: 169 AIALYRRMLELELKPRLITLLALLPACV--NVA--ALNLIKEIHGYGIRNDIVPHPQLGS 224
A+AL +M+E+ +P IT L+ N A A+ L+ + G + ++V + + +
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 225 GLIEAYGRCGCLVNSRNVFWKMR--DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMA 282
GL + G + N+ KM ++ DVV+++++I + + AL FKEME
Sbjct: 234 GLCKR----GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 283 GVKPDGITFLGVLKA-CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
G++P+ +T+ ++ CS+ ++D + +++ + + ++ L+D + G+
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK--INPNLVTFNALIDAFVKEGKFV 347
Query: 342 E 342
E
Sbjct: 348 E 348
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
L+ L V NE T+ I+ A+ D KA + R+ L + T ALL AC
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTG-KAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 197 N----VAALNLIKEIHGYGI-RNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD--M 249
+AL + KE+ I RN V + LI+ + R G + + ++ +M+ +
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNI-----LIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 250 DKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
D+ ++S ISA + G+ A +T +EME GVKP+ T+ ++K + A + AL
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 310 YFTRMQRDYGVEASSDHYSCLV-DVLSRA 337
+ M + G++ Y CL+ +LSRA
Sbjct: 821 CYEEM-KAMGIKPDKAVYHCLLTSLLSRA 848
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 16/234 (6%)
Query: 117 VVWNAMISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALY 173
V + +I+LY + ALE+ +M V N T++ +I D A A A++
Sbjct: 485 VTYGCLINLYTKV-GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA-NAFAVF 542
Query: 174 RRMLELELKPRLITLLALLPACVNVA----ALNLIKEIHGYGIRNDIVPHPQLGSGLIEA 229
M++ +KP +I ++ A + A+ +KE+ R P + +I
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR----PTTRTFMPIIHG 598
Query: 230 YGRCGCLVNSRNVFWKMRDMD--KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
Y + G + S VF MR V ++ LI+ + + A+E EM +AGV +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 288 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
T+ +++ + G A YFTR+Q + G++ Y L+ ++GR+
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNE-GLDVDIFTYEALLKACCKSGRMQ 711
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 16/158 (10%)
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVA----ALNLIKEIHGYGIRNDIVPHPQLG 223
K + +++R+ E P ++T L+ V AL + + + G+++++ + +
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 224 SGLIEAYGRCGCLVNSRNVFWKMRDMDK-----DVVVWSSLISAYALHGEAKAALETFKE 278
+G ++ L + N F DM K DV++++++ISA+ G A++T KE
Sbjct: 527 NGFVK-------LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
Query: 279 MEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
M+ +P TF+ ++ + +G +L F M+R
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 14/234 (5%)
Query: 117 VVWNAMIS---LYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAI 170
V++N +I Y H D AL LF M+ + PN T++ +I+ L + + A
Sbjct: 186 VIFNTIIDSLCKYRHVDD----ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS-DAS 240
Query: 171 ALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAY 230
L M+E ++ P L+T AL+ A V +++H I+ I P + LI +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 231 GRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDG 288
L ++ +F M +D D+ +++LI + + E F+EM G+ D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 289 ITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+T+ +++ H G D+A F +M D GV YS L+D L G+L +
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEK 413
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 103 SARHLFDEIPHR----NEVVWNAMISL---YAHSPDSLPAALELFHLMDVPPNESTFNPI 155
A +LF E+ + N V ++++IS Y D+ ++ + PN TFN +
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPNLVTFNAL 261
Query: 156 IAALAAQNDGAF-KAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRN 214
I A + G F +A L+ M++ + P + T +L+ L+ K++ + +
Sbjct: 262 IDAFVKE--GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 215 DIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAA 272
D P + LI+ + + + + +F +M R + D V +++LI G+ A
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 273 LETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVD 332
+ FK+M GV PD +T+ +L + G + AL F MQ+ ++ Y+ +++
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKLDIYIYTTMIE 438
Query: 333 VLSRAGRLHE 342
+ +AG++ +
Sbjct: 439 GMCKAGKVDD 448
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 91/181 (50%), Gaps = 13/181 (7%)
Query: 169 AIALYRRMLELELKPRLITLLALLPACV--NVA--ALNLIKEIHGYGIRNDIVPHPQLGS 224
A+AL +M+E+ +P IT L+ N A A+ L+ + G + ++V + + +
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 225 GLIEAYGRCGCLVNSRNVFWKMR--DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMA 282
GL + G + + N+ KM ++ DVV+++++I + + AL FKEME
Sbjct: 159 GLCKR----GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 283 GVKPDGITFLGVLKA-CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
G++P+ +T+ ++ CS+ ++D + +++ + + ++ L+D + G+
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK--INPNLVTFNALIDAFVKEGKFV 272
Query: 342 E 342
E
Sbjct: 273 E 273
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 12/245 (4%)
Query: 105 RHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD--VPPNESTFNPIIAALAAQ 162
R + + H NEV +N +I+ +++ L A+ L ++ + PN TFN +I ++
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386
Query: 163 NDGAFK-AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQ 221
G FK A+ ++ M L P ++ LL A +L + + RN +
Sbjct: 387 --GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 222 LGSGLIEAYGRCGCLVNSRNVFWKMRD--MDKDVVVWSSLISAYALHGEAKAALETFKEM 279
+G+I+ + G L + + +M +D D+V +S+LI+ + G K A E +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 280 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYS--CLVDVLSRA 337
G+ P+GI + ++ C G +A+ + M + + DH++ LV L +A
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE---GHTRDHFTFNVLVTSLCKA 561
Query: 338 GRLHE 342
G++ E
Sbjct: 562 GKVAE 566
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 133/326 (40%), Gaps = 34/326 (10%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
F++L+ + ++++ +++F H+ L + D + F+ ++ R L S
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLE-MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKM 140
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAA 136
K F + +L+N + H A L D+I
Sbjct: 141 MKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG----------------------- 177
Query: 137 LELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
+ PN +N II +L + A+ + + M ++ ++P ++T +L+
Sbjct: 178 ------LGYEPNVVIYNTIIDSLCEKGQ-VNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 197 NVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVV 254
+ + I +R I P S LI+ YG+ G L+ ++ + +M R ++ ++V
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIV 290
Query: 255 VWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRM 314
++SLI+ +HG A + + G P+ +T+ ++ A DD + M
Sbjct: 291 TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM 350
Query: 315 QRDYGVEASSDHYSCLVDVLSRAGRL 340
RD GV+ + Y+ L +AG+
Sbjct: 351 SRD-GVDGDTFTYNTLYQGYCQAGKF 375
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 94/177 (53%), Gaps = 16/177 (9%)
Query: 136 ALELFHLM-----DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
AL+LF+ M + P+ TF I+ + + + A++ M+ LKP +++ A
Sbjct: 170 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE-IENCRAVFEAMVAEGLKPNIVSYNA 228
Query: 191 LLPA----CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
L+ A ++ AL+++ +I GI D+V + + L+ +YGR ++ VF M
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY----TCLLNSYGRSRQPGKAKEVFLMM 284
Query: 247 RDMDK--DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
R + +VV +++LI AY +G A+E F++ME G+KP+ ++ +L ACS +
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 116/262 (44%), Gaps = 54/262 (20%)
Query: 89 SALINLYGHCLSLTSARHLF----DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD 144
+ L+N YG A+ +F E N V +NA+I Y S L A+E+F M+
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG-SNGFLAEAVEIFRQME 320
Query: 145 ---VPPNESTFNPIIAAL--------------AAQNDG------AF-------------- 167
+ PN + ++AA AAQ+ G A+
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVA----ALNLIKEIHGYGIRNDIVP-HPQL 222
KAIALY+ M + ++K +T L+ ++ A++ +KE+ I P ++
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI-----PLTKEV 435
Query: 223 GSGLIEAYGRCGCLVNSRNVF--WKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEME 280
S ++ AY + G + + ++F KM + DV+ ++S++ AY + A E F EME
Sbjct: 436 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 495
Query: 281 MAGVKPDGITFLGVLKACSHAG 302
G++PD I +++A + G
Sbjct: 496 ANGIEPDSIACSALMRAFNKGG 517
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 10/230 (4%)
Query: 117 VVWNAMISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALY 173
V N ++S Y S AL F LM V P+ +TFN II L+ + +A+ L+
Sbjct: 117 VTHNIVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS-QALDLF 174
Query: 174 RRMLE--LELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYG 231
M E E +P ++T +++ + + + + + P+ + L+ AY
Sbjct: 175 NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA 234
Query: 232 RCGCLVNSRNVFW--KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGI 289
G + +V K + DVV ++ L+++Y + A E F M KP+ +
Sbjct: 235 VHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 294
Query: 290 TFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 339
T+ ++ A GF +A+ F +M++D G++ + L+ SR+ +
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSKK 343
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 183 PRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVP-HPQLGSGLIEAYGRCGCLVNSRN 241
PRL+ L L C V AL + +H + I P + +IE Y C ++ N
Sbjct: 113 PRLLGLAKL---CGEVEALEEARVVH-----DCITPLDARSYHTVIEMYSGCRSTDDALN 164
Query: 242 VFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
VF +M + + W ++I A +GE + A++ F G KPD F V AC
Sbjct: 165 VFNEMPKRNSET--WGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSI 222
Query: 302 GFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G ++ L +F M RDYG+ S + Y ++++L+ G L E
Sbjct: 223 GDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDE 263
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 94/177 (53%), Gaps = 16/177 (9%)
Query: 136 ALELFHLM-----DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
AL+LF+ M + P+ TF I+ + + + A++ M+ LKP +++ A
Sbjct: 302 ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE-IENCRAVFEAMVAEGLKPNIVSYNA 360
Query: 191 LLPA----CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM 246
L+ A ++ AL+++ +I GI D+V + + L+ +YGR ++ VF M
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY----TCLLNSYGRSRQPGKAKEVFLMM 416
Query: 247 RDMDK--DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHA 301
R + +VV +++LI AY +G A+E F++ME G+KP+ ++ +L ACS +
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 116/262 (44%), Gaps = 54/262 (20%)
Query: 89 SALINLYGHCLSLTSARHLF----DEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMD 144
+ L+N YG A+ +F E N V +NA+I Y S L A+E+F M+
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG-SNGFLAEAVEIFRQME 452
Query: 145 ---VPPNESTFNPIIAAL--------------AAQNDG------AF-------------- 167
+ PN + ++AA AAQ+ G A+
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 168 KAIALYRRMLELELKPRLITLLALLPACVNVA----ALNLIKEIHGYGIRNDIVP-HPQL 222
KAIALY+ M + ++K +T L+ ++ A++ +KE+ I P ++
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI-----PLTKEV 567
Query: 223 GSGLIEAYGRCGCLVNSRNVF--WKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEME 280
S ++ AY + G + + ++F KM + DV+ ++S++ AY + A E F EME
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 281 MAGVKPDGITFLGVLKACSHAG 302
G++PD I +++A + G
Sbjct: 628 ANGIEPDSIACSALMRAFNKGG 649
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 10/227 (4%)
Query: 120 NAMISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALYRRM 176
N ++S Y S AL F LM V P+ +TFN II L+ + +A+ L+ M
Sbjct: 252 NIVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS-QALDLFNSM 309
Query: 177 LE--LELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCG 234
E E +P ++T +++ + + + + + P+ + L+ AY G
Sbjct: 310 REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
Query: 235 CLVNSRNVFW--KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFL 292
+ +V K + DVV ++ L+++Y + A E F M KP+ +T+
Sbjct: 370 MSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYN 429
Query: 293 GVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 339
++ A GF +A+ F +M++D G++ + L+ SR+ +
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSKK 475
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 159/370 (42%), Gaps = 48/370 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
F++L+++ ++D + ++ + L +P + +++L + L S
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQ-MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR----NEVVWNAMISLYAHSPDS 132
K + +L+N + + A ++FD++ N V++N +I S
Sbjct: 143 IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK-Q 201
Query: 133 LPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
+ AL+L + M+ + P+ T+N +I+ L + + A + M + E+ P + T
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS-DATRMVSCMTKREIYPDVFTFN 260
Query: 190 ALLPACVNVAALNLIKEIHGYGIRN----DIVPHPQLGSGLI---------EAYG---RC 233
AL+ ACV ++ +E + IR DIV + L GL E +G
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 234 GC---------LVN----SRNV------FWKM--RDMDKDVVVWSSLISAYALHGEAKAA 272
GC L+N S+ V F +M R + ++ V ++ LI Y G+ A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 273 LETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVD 332
E F+ M GV P+ IT+ +L G + AL MQ++ G++A Y+ ++
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN-GMDADIVTYNIIIR 439
Query: 333 VLSRAGRLHE 342
+ +AG + +
Sbjct: 440 GMCKAGEVAD 449
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 133/322 (41%), Gaps = 40/322 (12%)
Query: 17 FTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHA 76
F+K+++ +D +++FHH+ + D + +++V+ R + S+
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHME-VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKM 130
Query: 77 AKSSFLSNPFIASALINLYGHCLSLTSARHL---FDEIPHRNEVVWNAMISLYAHSPDSL 133
K + + S+LIN + + A L +E+ R +VV I + +
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 134 PAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLA 190
A+ELF M+ V + T+N ++A L + A L R M+ ++ P +IT A
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS-DAARLMRDMVMRDIVPNVITFTA 249
Query: 191 LLPACVNVA----ALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRC------------- 233
++ V A+ L +E+ + D+ + L +GL +GR
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC-MHGRVDEAKQMLDLMVTK 308
Query: 234 GCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 293
GCL DVV +++LI+ + + F+EM G+ D IT+
Sbjct: 309 GCL--------------PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 294 VLKACSHAGFADDALCYFTRMQ 315
+++ AG D A F+RM
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMD 376
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 226 LIEAYGRCGCLVNSRNVFWKMRDM--DKDVVVWSSLISAYALHGEAKAALETFKEMEMAG 283
+I RC V + +V KM + DVV SSLI+ + A++ +ME G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 284 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+PD + + ++ G +DA+ F RM+RD GV A + Y+ LV L +GR +
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSD 227
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 127/280 (45%), Gaps = 27/280 (9%)
Query: 83 SNPFIASALINLYGHCLSLT-SARHLFDEI----------PHRNEVVWNAMISLYAHSPD 131
NP I + +G S S+ +L +EI P + V ++ ++S A S +
Sbjct: 25 GNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKN 84
Query: 132 SLPAALELFHLMDVPP---NESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITL 188
+ LFH M+V + ++N +I L + A+++ +M++ +P ++T+
Sbjct: 85 -YDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVI-ALSVVGKMMKFGYEPDVVTV 142
Query: 189 LALLPACVN----VAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFW 244
+L+ A++L+ ++ G R D+V + + +I+ + G + ++ +F
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY----NTIIDGSCKIGLVNDAVELFD 198
Query: 245 KM-RD-MDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAG 302
+M RD + D V ++SL++ G A ++M M + P+ ITF V+ G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 303 FADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+A+ + M R V+ Y+ L++ L GR+ E
Sbjct: 259 KFSEAMKLYEEMTR-RCVDPDVFTYNSLINGLCMHGRVDE 297
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKE 206
PN T+N +I + N +A+ ++ +M E KP +T L+ L++ +
Sbjct: 397 PNTVTYNRLIHSYGRANY-LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 207 IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD--KDVVVWSSLISAYA 264
++ + P S +I G+ G L + +F +M D ++V ++ ++ +A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 265 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 324
+ AL+ +++M+ AG +PD +T+ V++ H G+ ++A FT MQ+ +
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDE 574
Query: 325 DHYSCLVDVLSRAGRLHE 342
Y LVD+ +AG + +
Sbjct: 575 PVYGLLVDLWGKAGNVEK 592
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKE 206
PN T+N +I + N +A+ ++ +M E KP +T L+ L++ +
Sbjct: 397 PNTVTYNRLIHSYGRANY-LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 207 IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD--KDVVVWSSLISAYA 264
++ + P S +I G+ G L + +F +M D ++V ++ ++ +A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 265 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 324
+ AL+ +++M+ AG +PD +T+ V++ H G+ ++A FT MQ+ +
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDE 574
Query: 325 DHYSCLVDVLSRAGRLHE 342
Y LVD+ +AG + +
Sbjct: 575 PVYGLLVDLWGKAGNVEK 592
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKE 206
PN T+N +I + N +A+ ++ +M E KP +T L+ L++ +
Sbjct: 397 PNTVTYNRLIHSYGRANY-LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 207 IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD--KDVVVWSSLISAYA 264
++ + P S +I G+ G L + +F +M D ++V ++ ++ +A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 265 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 324
+ AL+ +++M+ AG +PD +T+ V++ H G+ ++A FT MQ+ +
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDE 574
Query: 325 DHYSCLVDVLSRAGRLHE 342
Y LVD+ +AG + +
Sbjct: 575 PVYGLLVDLWGKAGNVEK 592
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 15/235 (6%)
Query: 118 VWNAMISLYAHSPDSLPAALELFHLM---DVPPNESTFNPII-AALAAQNDGAFKAIALY 173
V+NAM+ +Y+ S A EL M P+ +FN +I A L + A+ L
Sbjct: 227 VYNAMMGVYSRS-GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 174 RRMLELELKPRLITLLALLPACVNVA----ALNLIKEIHGYGIRNDIVPHPQLGSGLIEA 229
+ L+P IT LL AC + A+ + +++ + + D+ + + +I
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTY----NAMISV 341
Query: 230 YGRCGCLVNSRNVFW--KMRDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
YGRCG + +F +++ D V ++SL+ A+A + E +++M+ G D
Sbjct: 342 YGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD 401
Query: 288 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+T+ ++ G D AL + M+ G + Y+ L+D L +A R E
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 150/345 (43%), Gaps = 36/345 (10%)
Query: 20 LITSHVNQSRHDQALTVFH-----HIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHA 74
+ V Q +AL VF H HS + + + +L + L I
Sbjct: 161 FVVKSVGQESWQRALEVFEWLNLRHWHSP-----NARMVAAILGVLGRWNQESLAVEIFT 215
Query: 75 HAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR----NEVVWNAMISLYAHSP 130
A + + + +A++ +Y + A+ L D + R + + +N +I+ S
Sbjct: 216 RA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSG 274
Query: 131 DSLPA-ALELFHLM---DVPPNESTFNPIIAALAAQN--DGAFKAIALYRRMLELELKPR 184
P A+EL ++ + P+ T+N +++A + + DGA K ++ M +P
Sbjct: 275 GLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVK---VFEDMEAHRCQPD 331
Query: 185 LITLLALLPA---C-VNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
L T A++ C + A L E+ G D V + + L+ A+ R +
Sbjct: 332 LWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY----NSLLYAFARERNTEKVK 387
Query: 241 NVFWKMRDMD--KDVVVWSSLISAYALHGEAKAALETFKEME-MAGVKPDGITFLGVLKA 297
V+ +M+ M KD + ++++I Y G+ AL+ +K+M+ ++G PD IT+ ++ +
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 298 CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
A +A + M D G++ + YS L+ ++AG+ E
Sbjct: 448 LGKANRTVEAAALMSEML-DVGIKPTLQTYSALICGYAKAGKREE 491
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 23/302 (7%)
Query: 56 VLKSCTALRRPFLGA-SIHAHAAKSSFLSNPFIASALINLYGHCLS--LTSARHLFD--- 109
++ +C ++ L A S+ A K + + S L+N G CL ++ A L D
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN--GFCLEGRVSEAVALVDRMV 167
Query: 110 EIPHRNEVVWNAMISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGA 166
E+ R ++V + + + AL L M P+E T+ P++ L + A
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 167 FKAIALYRRMLELELKPRLITLLALLPA-CVNVA---ALNLIKEIHGYGIRNDIVPHPQL 222
A+ L+R+M E +K ++ ++ + C + + AL+L E+ GI+ D+V + L
Sbjct: 228 L-ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 223 GSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEME 280
GL G + + +M R++ DVV +S+LI + G+ A E + EM
Sbjct: 287 IGGLCND----GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 281 MAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
G+ PD IT+ ++ +A F M G E YS L++ +A R+
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRV 401
Query: 341 HE 342
+
Sbjct: 402 DD 403
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 110/248 (44%), Gaps = 12/248 (4%)
Query: 104 ARHLFDEIPHRN---EVVWNAMISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIA 157
A LF ++ RN VV +++ S AL LF+ M+ + + T++ +I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 158 ALAAQNDGAFKAIA-LYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI 216
L NDG + A + R M+ + P ++T AL+ V L KE++ I I
Sbjct: 289 GLC--NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 217 VPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALE 274
P + LI+ + + CL + +F M + + D+V +S LI++Y +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 275 TFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVL 334
F+E+ G+ P+ IT+ ++ +G + A F M GV S Y L+D L
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV-SRGVPPSVVTYGILLDGL 465
Query: 335 SRAGRLHE 342
G L++
Sbjct: 466 CDNGELNK 473
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 16/229 (6%)
Query: 120 NAMISLYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFKAIALYRRM 176
N +I +A S D AL+L + + +T II+ALA + +A AL+ +
Sbjct: 273 NDIIMGFAKSGDP-SKALQLLGMAQATGLSAKTATLVSIISALA-DSGRTLEAEALFEEL 330
Query: 177 LELELKPRLITLLALLPACVNVAAL----NLIKEIHGYGIRNDIVPHPQLGSGLIEAYGR 232
+ +KPR ALL V L +++ E+ G+ P S LI+AY
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS----PDEHTYSLLIDAYVN 386
Query: 233 CGCLVNSRNVFWKMR--DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGIT 290
G ++R V +M D+ + V+S L++ + GE + + KEM+ GVKPD
Sbjct: 387 AGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 291 FLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 339
+ V+ D A+ F RM + G+E ++ L+D + GR
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSE-GIEPDRVTWNTLIDCHCKHGR 494
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 145 VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL-ELKPRLITLLALLPACVNVA---- 199
V P+E T++ +I A N G +++ + + +E +++P LL +
Sbjct: 370 VSPDEHTYSLLIDAYV--NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427
Query: 200 ALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWS 257
++KE+ G++ P Q + +I+ +G+ CL ++ F +M ++ D V W+
Sbjct: 428 TFQVLKEMKSIGVK----PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 258 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 317
+LI + HG A E F+ ME G P T+ ++ + DD +M +
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM-KS 542
Query: 318 YGVEASSDHYSCLVDVLSRAGRLHE 342
G+ + ++ LVDV ++GR ++
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFND 567
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 151/356 (42%), Gaps = 24/356 (6%)
Query: 2 ASSSYYSATHSRLLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCT 61
A +Y ++ F LI V R D A V + ++ + D ++ ++
Sbjct: 341 AKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG-- 398
Query: 62 ALRRPFLGASIHAHAAKSSFLSNPFIASALINLYGHCL--SLTSARHLFDEIP----HRN 115
+ +G ++ + P + S I + G C + A ++ +E+ N
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 116 EVVWNAMISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIAL 172
V +N +IS + +P A+E+F M P+ TFN +I+ L + D A+ L
Sbjct: 459 TVGFNCLISAFCKE-HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWL 516
Query: 173 YRRMLELELKPRLITLLALLPACVNVA----ALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
R M+ + +T L+ A + A L+ E+ G D + + L GL
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC- 575
Query: 229 AYGRCGCLVNSRNVFWKM-RDMDK-DVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
R G + +R++F KM RD + + LI+ G + A+E KEM + G P
Sbjct: 576 ---RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
D +TF ++ AG +D L F ++Q + G+ + ++ L+ L + G +++
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYD 687
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 91 LINLYGHCLSLTSARHLFDEIPHRNEVVWN-AMISLYAHSPDSLPAALELFHLM------ 143
L L C +A +F E P V WN A ++ H L E HL+
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVG-VCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275
Query: 144 DVPPNESTFNPIIAALA--AQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAAL 201
P+ +++ ++ + D +K I + +R LKP +++ + L
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK---GLKPNSYIYGSIIGLLCRICKL 332
Query: 202 NLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSL 259
+E IR I+P + + LI+ + + G + + F++M RD+ DV+ ++++
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 260 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 319
IS + G+ A + F EM G++PD +TF ++ AG DA M + G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AG 451
Query: 320 VEASSDHYSCLVDVLSRAGRL 340
+ Y+ L+D L + G L
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDL 472
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 20/239 (8%)
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIA 171
N V + +I D L +A EL H M + PN T+N I+ L + +A+
Sbjct: 455 NVVTYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE-EAVK 512
Query: 172 LYRRMLELELKPRLITLLALLPACVNVAALN----LIKEIHGYGIRNDIVPHPQLGSGLI 227
L L +T L+ A ++ ++KE+ G G++ IV L +G
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF- 571
Query: 228 EAYGRC--GCLVNSRNVF-WKM-RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG 283
C G L + + W + + + + ++SL+ Y + KAA +K+M G
Sbjct: 572 -----CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 284 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
V PDG T+ ++K A +A F M + G S YS L+ + + E
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEM-KGKGFSVSVSTYSVLIKGFLKRKKFLE 684
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 91 LINLYGHCLSLTSARHLFDEIPHRNEVVWN-AMISLYAHSPDSLPAALELFHLM------ 143
L L C +A +F E P V WN A ++ H L E HL+
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVG-VCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELK 275
Query: 144 DVPPNESTFNPIIAALA--AQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAAL 201
P+ +++ ++ + D +K I + +R LKP +++ + L
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK---GLKPNSYIYGSIIGLLCRICKL 332
Query: 202 NLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSL 259
+E IR I+P + + LI+ + + G + + F++M RD+ DV+ ++++
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 260 ISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYG 319
IS + G+ A + F EM G++PD +TF ++ AG DA M + G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AG 451
Query: 320 VEASSDHYSCLVDVLSRAGRL 340
+ Y+ L+D L + G L
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDL 472
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 20/239 (8%)
Query: 115 NEVVWNAMISLYAHSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIA 171
N V + +I D L +A EL H M + PN T+N I+ L + +A+
Sbjct: 455 NVVTYTTLIDGLCKEGD-LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE-EAVK 512
Query: 172 LYRRMLELELKPRLITLLALLPACVNVAALN----LIKEIHGYGIRNDIVPHPQLGSGLI 227
L L +T L+ A ++ ++KE+ G G++ IV L +G
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF- 571
Query: 228 EAYGRC--GCLVNSRNVF-WKM-RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAG 283
C G L + + W + + + + ++SL+ Y + KAA +K+M G
Sbjct: 572 -----CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 284 VKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
V PDG T+ ++K A +A F M + G S YS L+ + + E
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEM-KGKGFSVSVSTYSVLIKGFLKRKKFLE 684
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 16/233 (6%)
Query: 117 VVWNAMIS---LYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAF-KA 169
V++N +I Y H D AL LF MD + P+ T++ +I+ L N G + A
Sbjct: 259 VIYNTIIDGLCKYKHMDD----ALNLFTEMDNKGIRPDVFTYSSLISCLC--NYGRWSDA 312
Query: 170 IALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEA 229
L M+E ++ P ++T AL+ A V L ++++ I+ I P S LI
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 230 YGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
+ L ++++F M +D +VV +S+LI + + +E F+EM G+ +
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 288 GITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
+T+ ++ A D+A F +M GV + Y+ L+D L + G+L
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKL 484
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 151/361 (41%), Gaps = 46/361 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ F KL+++ ++ + +++ + TL + D + +S+ + + L ++
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR----NEVVWNAMI-SLYAH 128
A K + + S+L+N Y H ++ A L D++ + + +I L+ H
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 129 SPDSLPAAL-ELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
+ S AL + P+ T+ ++ L + D A++L ++M + +++ ++
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL-ALSLLKKMEKGKIEADVVI 260
Query: 188 LLALLPACVNVA----ALNLIKEIHGYGIRNDIVPHPQL--------------------- 222
++ ALNL E+ GIR D+ + L
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 223 ----------GSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAK 270
S LI+A+ + G LV + ++ +M R +D D+ +SSLI+ + +H
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 271 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 330
A F+ M P+ +T+ ++K A ++ + F M + G+ ++ Y+ L
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYTTL 439
Query: 331 V 331
+
Sbjct: 440 I 440
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 4/200 (2%)
Query: 145 VPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLI 204
+ PN TF+ +I A + +A LY M++ + P + T +L+ L+
Sbjct: 324 INPNVVTFSALIDAFVKEGK-LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 205 KEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISA 262
K + I D P+ S LI+ + + + +F +M R + + V +++LI
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 263 YALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEA 322
+ + A FK+M GV P+ +T+ +L G A+ F +QR +E
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST-MEP 501
Query: 323 SSDHYSCLVDVLSRAGRLHE 342
Y+ +++ + +AG++ +
Sbjct: 502 DIYTYNIMIEGMCKAGKVED 521
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 169 AIALYRRMLELELKPRLITLLALLPACV--NVA--ALNLIKEIHGYGIRNDIVPHPQLGS 224
A+AL +M+E+ KP T L+ N A A+ L+ ++ G + D+V + + +
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 225 GLIEAYGRCGCLVNSRNVFWKMRD--MDKDVVVWSSLISAYALHGEAKAALETFKEMEMA 282
GL + G + + ++ KM ++ DVV+++++I + AL F EM+
Sbjct: 232 GLCKR----GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 283 GVKPDGITFLGVLKA-CSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLH 341
G++PD T+ ++ C++ ++D + ++R + + +S L+D + G+L
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLV 345
Query: 342 E 342
E
Sbjct: 346 E 346
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 14/236 (5%)
Query: 115 NEVVWNAMIS---LYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFK 168
N V+++ +I Y H D AL LF M+ V PN T++ +I+ L +
Sbjct: 259 NVVIYSTVIDSLCKYRHEDD----ALNLFTEMENKGVRPNVITYSSLISCLCNYERWS-D 313
Query: 169 AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIE 228
A L M+E ++ P ++T AL+ A V L ++++ I+ I P S LI
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 229 AYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKP 286
+ L ++++F M +D +VV +++LI+ + +E F+EM G+
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 287 DGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ +T+ ++ A D+A F +M D GV + Y+ L+D L + G+L +
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEK 488
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 113/248 (45%), Gaps = 10/248 (4%)
Query: 103 SARHLFDEIPHR----NEVVWNAMISLYAHSPDSLPAALELFHLMD--VPPNESTFNPII 156
A +LF E+ ++ N + ++++IS + A+ L +++ + PN TFN +I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 157 AALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDI 216
A + +A LY M++ + P + T +L+ L+ K + I D
Sbjct: 338 DAFVKEGK-LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 217 VPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALE 274
P+ + LI + + + +F +M R + + V +++LI + + A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 275 TFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVL 334
FK+M GV P+ +T+ +L G + A+ F +QR +E + Y+ +++ +
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGM 515
Query: 335 SRAGRLHE 342
+AG++ +
Sbjct: 516 CKAGKVED 523
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 4/198 (2%)
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKE 206
PN T+N +I + N +A+ ++ +M E +P +T L+ L++ +
Sbjct: 392 PNTVTYNRLIHSYGRANY-LKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 207 IHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYA 264
++ + P S +I G+ G L + +F +M + ++V ++ +I+ +A
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 265 LHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASS 324
+ AL+ +++M+ AG +PD +T+ V++ H GF ++A F MQR V
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDE 569
Query: 325 DHYSCLVDVLSRAGRLHE 342
Y LVD+ +AG + +
Sbjct: 570 PVYGLLVDLWGKAGNVDK 587
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 11/265 (4%)
Query: 87 IASALINLYGHCLSLTSARHLFDEIPHRNEVV----WNAMISLYAHSPDSLPAALELFHL 142
+ + + G + A L D+IP + ++ + ++ Y+ + A++LF
Sbjct: 177 VIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRT-GKYEKAIDLFER 235
Query: 143 MDV---PPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVA 199
M P T+N I+ K + + M LK T +L AC
Sbjct: 236 MKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREG 295
Query: 200 ALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDMD--KDVVVWS 257
L KE P + L++ +G+ G + +V +M + D V ++
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 258 SLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRD 317
L++AY G +K A + M GV P+ IT+ V+ A AG D+AL F M ++
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KE 414
Query: 318 YGVEASSDHYSCLVDVLSRAGRLHE 342
G ++ Y+ ++ +L + R +E
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNE 439
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 26/270 (9%)
Query: 89 SALINLYGHCLSLTSARHLFDEIPHRN----EVVWNAMISLYAHSPD--SLPAALELFHL 142
+ LI+ YG C S A ++ E+ +NA+++ A D S +
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 143 MDVPPNESTFNPIIAALAAQNDGAFKAIA-LYRRMLELELKPRLITLLALLPA---CVNV 198
P E++++ ++ A G + I + R+ E ++ P + L LL A C +
Sbjct: 555 KGFKPTETSYSLMLQCYA--KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 199 A----ALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD--MDKD 252
A A L K+ HGY P + + ++ + R + + +R+ + D
Sbjct: 613 AGSERAFTLFKK-HGYK------PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
+V ++SL+ Y GE A E K +E + +KPD +++ V+K G +A+ +
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
M + G+ Y+ V + G E
Sbjct: 726 EMT-ERGIRPCIFTYNTFVSGYTAMGMFAE 754
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 143/336 (42%), Gaps = 16/336 (4%)
Query: 19 KLITSHVNQSRHDQALT-VFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIHAHAA 77
K +TS VN R+ + + F + + V+ ++ A +R I
Sbjct: 42 KSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQK 101
Query: 78 KSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHRN----EVVWNAMISLYAHSPDSL 133
K +S A+ +I+LYG +A+ +F+E+P+R+ + +NA++S Y S
Sbjct: 102 KYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLS-KKF 160
Query: 134 PAALELFH----LMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLL 189
ELF+ + + P+ ++N +I AL + D +A+AL + LKP ++T
Sbjct: 161 DVVEELFNELPGKLSIKPDIVSYNTLIKALC-EKDSLPEAVALLDEIENKGLKPDIVTFN 219
Query: 190 ALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR-- 247
LL + L +EI + ++ + + + N+F +++
Sbjct: 220 TLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKAS 279
Query: 248 DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDA 307
+ DV ++++I G+ A +KE+ G +PD TF +L A AG + A
Sbjct: 280 GLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESA 339
Query: 308 LCYFTR-MQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ F + Y V ++ LVD L + + E
Sbjct: 340 IELFKETFSKRYLVGQTT--LQQLVDELVKGSKREE 373
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 110/229 (48%), Gaps = 12/229 (5%)
Query: 117 VVWNAMISLYAHSPDSLPAALELFHLMD--VPPNESTFNPIIAALAAQNDGAFKAIALYR 174
V +N+MI++Y + A L + + + V PN +++ +++ + +N +A++++
Sbjct: 261 VAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS-VYVENHKFLEALSVFA 319
Query: 175 RMLELELKPRLITLLALLPACVNVAALNLIKEIHG--YGIRN-DIVPHPQLGSGLIEAYG 231
M E+ L T ++ L+++KE + +R DI P+ + ++ YG
Sbjct: 320 EMKEVNCALDLTTCNIMIDVY---GQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 376
Query: 232 RCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGI 289
+ ++F M +D++++VV ++++I Y E + A +EM+ G++P+ I
Sbjct: 377 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 436
Query: 290 TFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAG 338
T+ ++ AG D A F ++ R GVE Y ++ R G
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKL-RSSGVEIDQVLYQTMIVAYERVG 484
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 16/235 (6%)
Query: 115 NEVVWNAMIS---LYAHSPDSLPAALELFHLMD---VPPNESTFNPIIAALAAQNDGAFK 168
N V+++ +I Y H D AL LF M+ V PN T++ +I+ L N G +
Sbjct: 252 NVVIYSTVIDSLCKYRHEDD----ALNLFTEMENKGVRPNVITYSSLISCLC--NYGRWS 305
Query: 169 -AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLI 227
A L M+E ++ P L+T AL+ A V L ++++ I+ I P+ S LI
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 228 EAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVK 285
+ L ++ + M +D +VV +++LI+ + +E F+EM G+
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 286 PDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRL 340
+ +T+ ++ A D+A F +M GV + Y+ L+D L + G+L
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKL 479
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 112/244 (45%), Gaps = 10/244 (4%)
Query: 104 ARHLFDEIPHR----NEVVWNAMISLYAHSPDSLPAALELFHLMD--VPPNESTFNPIIA 157
A +LF E+ ++ N + ++++IS + A+ L +++ + PN TF+ +I
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 158 ALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIV 217
A + KA LY M++ + P + T +L+ + L K++ IR D +
Sbjct: 332 AFVKKGK-LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 218 PHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALET 275
P+ + LI + + + +F +M R + + V +++LI + + A
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 276 FKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLS 335
FK+M GV P+ +T+ +L G A+ F +QR +E Y+ +++ +
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMC 509
Query: 336 RAGR 339
+AG+
Sbjct: 510 KAGK 513
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 147 PNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV--NVA--ALN 202
P+ T N ++ N + A+AL +M+E+ KP +T L+ N A A+
Sbjct: 146 PDIVTLNSLLNGFCHGNRIS-DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 203 LIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR--DMDKDVVVWSSLI 260
LI + G + D+V + + +GL + G + N+ KM ++ +VV++S++I
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKR----GDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 261 SAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKA-CSHAGFADDALCYFTRMQRDYG 319
+ + AL F EME GV+P+ IT+ ++ C++ ++D + ++R
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK-- 318
Query: 320 VEASSDHYSCLVDVLSRAGRL 340
+ + +S L+D + G+L
Sbjct: 319 INPNLVTFSALIDAFVKKGKL 339
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 21/233 (9%)
Query: 89 SALINLYGHCLSLTSARHLFDEIPHR----NEVVWNAMISLYAHSPDSLPAALELFHLM- 143
S LI+ Y L LF + H+ + VV+++ I +Y S D A++ ++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 144 -DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA---CVNV- 198
+ PN T+ +I L Q+ ++A +Y ++L+ ++P ++T +L+ C N+
Sbjct: 385 QGISPNVVTYTILIKGLC-QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVW 256
+ L +++ G D+V + L GL + G ++++ KM + + +VVV+
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGL----SKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALC 309
+SLI + AL+ F+ M + G+KPD TF V++ +DA C
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR----VSIMEDAFC 548
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 28/294 (9%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKS-------CTALRRP 66
++ F LI +R D+AL VF + + D F+ V++ C ++ P
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFR-LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK-P 553
Query: 67 FLGASIHAHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDE-IPHRNE---VVWNAM 122
+G + ++ ++ + + +I+L C + A F+ I + E V +N M
Sbjct: 554 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 613
Query: 123 ISLYAHSPDSLPAALELFHLMDVPP---NESTFNPIIAALAAQNDGAFKAIALYRRMLEL 179
I Y S L A +F L+ V P N T +I L ND AI ++ M E
Sbjct: 614 ICGYC-SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD-GAIRMFSIMAEK 671
Query: 180 ELKPRLIT---LLALLPACVNV-AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGC 235
KP +T L+ V++ + L +E+ GI IV + S +I+ + G
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY----SIIIDGLCKRGR 727
Query: 236 LVNSRNVFWKMRDMD--KDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPD 287
+ + N+F + D DVV ++ LI Y G A ++ M GVKPD
Sbjct: 728 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 170 IALYRRMLELELK----PRLITLLALLPACVNVA----ALNLIKEIHGYGIRNDIVPHPQ 221
I + R+L L L P ++T L+ A +L K + GI D++ +
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY-- 324
Query: 222 LGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEM 279
S LI+ Y + G L +F + + + DVVV+SS I Y G+ A +K M
Sbjct: 325 --STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 280 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 339
G+ P+ +T+ ++K G +A + ++ + G+E S YS L+D + G
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKCGN 441
Query: 340 LH 341
L
Sbjct: 442 LR 443
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 101 LTSARHLFDEIPHR----NEVVWNAMISLYAHSPDSLPAALELFHLM--DVPPNESTFNP 154
+ A LFD + + N V++ A+I Y + A L L ++ + PN TFN
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 155 IIAALAAQNDGAFK-AIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYG-- 211
+I L A DG K A L +M+++ L+P + T L+ + + H Y
Sbjct: 573 LIHGLCA--DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD-----HAYSRF 625
Query: 212 ---IRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD--MDKDVVVWSSLISAYALH 266
+ + P + I+ Y R G L+++ ++ KMR+ + D+ +SSLI Y
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 267 GEAKAALETFKEMEMAGVKPDGITFLGVLK 296
G+ A + K M G +P TFL ++K
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 46/300 (15%)
Query: 86 FIASALINLYGHCLSLTSARHLFDEIP----HRNEVVWNAMISLYAHSPDSLPAALELFH 141
F ++LI Y L SA +F+E+P RNEV + +I + + A++LF
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA-RRIDEAMDLFV 312
Query: 142 LM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACVNV 198
M + P T+ +I +L + +A+ L + M E +KP + T L+ + +
Sbjct: 313 KMKDDECFPTVRTYTVLIKSLCGSERKS-EALNLVKEMEETGIKPNIHTYTVLIDSLCSQ 371
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGC---------LVNSR--------- 240
+E+ G + ++P+ + LI Y + G L+ SR
Sbjct: 372 CKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Query: 241 ----------NVFWKMRDMDK--------DVVVWSSLISAYALHGEAKAALETFKEMEMA 282
NV M ++K DVV ++SLI G +A M
Sbjct: 432 NELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Query: 283 GVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
G+ PD T+ ++ + + ++A F +++ GV + Y+ L+D +AG++ E
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDE 550
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 125/270 (46%), Gaps = 16/270 (5%)
Query: 83 SNPFIASALINLYGHCLSLTSARHLFDEIPHRNEVVWNA--MISLYAH-SP-----DSLP 134
S+ +A+ L L ++R L+ E+ +E V N +IS+Y+ +P D++
Sbjct: 300 SSDLLANIFEYLGRFSLDSVASRFLW-ELRESDEGVKNVSDLISIYSTCTPNPTVEDTIL 358
Query: 135 AALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
++ +DV P+ +++ ++ N+ A+ + +M E L L +LL A
Sbjct: 359 KFNKMHEELDVMPSSTSYEKLVKYSCDSNE-VVTALDVVEKMGEAGLMISADILHSLLHA 417
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRD--MDKD 252
V +L++ IH + P+ + +I R + N+ +++ ++ +
Sbjct: 418 IDEVLEFDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPN 477
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
+++ +++ Y +AL K+M+ AGVKPD ITF ++ C+ +DA+ +
Sbjct: 478 SSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQ----EDAITKYY 533
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+ GV+A+ Y L+D + +G+ +
Sbjct: 534 EEMKQAGVQATKRIYMSLIDAYAASGKFEK 563
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 158/361 (43%), Gaps = 46/361 (12%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ F+KL+++ ++ D +++ + + L + + + +S+++ + L ++
Sbjct: 81 IVEFSKLLSAIAKMNKFDLVISLGEQMQN-LGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEIPHR----NEVVWNAMI-SLYAH 128
A K + + ++L+N + H ++ A L ++ + +N +I L+ H
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 129 SPDSLPAAL-ELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLIT 187
+ S AL + + P+ T+ ++ L + D A++L ++M + +++P ++
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL-ALSLLKKMEQGKIEPGVVI 258
Query: 188 LLALLPACVNVA----ALNLIKEIHGYGIRNDIV-------------------------- 217
++ A N ALNL E+ GIR ++V
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 218 -----PHPQLGSGLIEAYGRCGCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAK 270
P+ S LI+A+ + G LV + ++ +M R +D D+ +SSLI+ + +H
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 271 AALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCL 330
A F+ M P+ +T+ ++K A D+ + F M + G+ ++ Y+ L
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ-RGLVGNTVTYTTL 437
Query: 331 V 331
+
Sbjct: 438 I 438
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 112/266 (42%), Gaps = 14/266 (5%)
Query: 84 NPFIA--SALINLYGHCLSLTSARHLFDEIPHR----NEVVWNAMISLYAHSPDSLPAAL 137
NP + SALI+ + L A L+DE+ R + ++++I+ + D L A
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-DRLDEAK 381
Query: 138 ELFHLM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPA 194
+F LM D PN T+N +I + + L+R M + L +T L+
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKR-VDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 195 CVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMR--DMDKD 252
+ + + + + ++P S L++ G + + VF ++ M+ D
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 253 VVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFT 312
+ ++ +I G+ + + F + + GVKP+ +T+ ++ G ++A F
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 313 RMQRDYGVEASSDHYSCLVDVLSRAG 338
M+ + G S Y+ L+ R G
Sbjct: 561 EMKEE-GPLPDSGTYNTLIRAHLRDG 585
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 79/146 (54%), Gaps = 7/146 (4%)
Query: 199 AALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM--DKDVVVW 256
AA L +E+ G+ D V + + +I+ +G+ G L ++ F +M+DM + DV+ +
Sbjct: 280 AARGLFEEMKFRGLVPDTVTY----NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 257 SSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQR 316
++LI+ + G+ LE ++EM+ G+KP+ +++ ++ A G A+ ++ M+R
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 317 DYGVEASSDHYSCLVDVLSRAGRLHE 342
G+ + Y+ L+D + G L +
Sbjct: 396 -VGLVPNEYTYTSLIDANCKIGNLSD 420
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 213 RNDIVPHPQLGSGLIEAYGRCGCLVNSRNVFWKMRDM-----DKDVVVWSSLISAYALHG 267
R + P + +GL+ + + G + + F +DM V ++ +I G
Sbjct: 220 RFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF---KDMIGAGARPTVFTYNIMIDCMCKEG 276
Query: 268 EAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHY 327
+ +AA F+EM+ G+ PD +T+ ++ G DD +C+F M +D E Y
Sbjct: 277 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITY 335
Query: 328 SCLVDVLSRAGRL 340
+ L++ + G+L
Sbjct: 336 NALINCFCKFGKL 348
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 108/231 (46%), Gaps = 8/231 (3%)
Query: 117 VVWNAMISLYAHSPDSLPAALELFHL--MDVPPNESTFNPIIAALAAQNDGAFK-AIALY 173
V ++++I+ L L L + M V PN T+ ++ +L N ++ A+ALY
Sbjct: 260 VTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKAN--IYRHALALY 317
Query: 174 RRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRC 233
+M+ + L+ L+ L ++ + ++ VP+ + L++ +
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 377
Query: 234 GCLVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITF 291
G L ++ + +M + + +VV +SS+I+ Y G + A+ ++ME V P+G T+
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 437
Query: 292 LGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
V+ AG + A+ ++ R GVE ++ LV+ L R GR+ E
Sbjct: 438 GTVIDGLFKAGKEEMAI-ELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 113/299 (37%), Gaps = 55/299 (18%)
Query: 43 TLTLPLDPHVFSLVLKSCTALRRPFLGA-SIHAHAAKSSFLSNPFIASALINLYGHCLSL 101
+L+LP + ++S + K +A GA + H KSS + L+ ++ C L
Sbjct: 81 SLSLPGNEDIYSCLAKE-SARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRL 139
Query: 102 TSARHLFDEIPHRNEVVWNAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAA 161
R +FD +PHR+ W A+ +++ E ++ L
Sbjct: 140 DITRQMFDRMPHRDFHSW----------------AIVFLGCIEMGDYEDAAFLFVSMLKH 183
Query: 162 QNDGAFKAIALYRRMLELELKPRLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQ 221
GAFK P I L +L AC + L K++H + +
Sbjct: 184 SQKGAFKI-------------PSWI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEED 229
Query: 222 --LGSGLIEAYGRCGCLVNSRNVFWKMRDMDKDVVVWSSLISAYALHGEAKAALETFKEM 279
L LI YG CL ++ V ++ + + V W++ ++ GE + + F EM
Sbjct: 230 SYLSGSLIRFYGEFRCLEDANLVLHQLSNA--NTVAWAAKVTNDYREGEFQEVIRDFIEM 287
Query: 280 EMAGVKPDGITFLGVLKACS------------HA-----GFADDAL--CYFTRMQRDYG 319
G+K + F VLKACS HA GF D L C M YG
Sbjct: 288 GNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYG 346
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 143/349 (40%), Gaps = 53/349 (15%)
Query: 14 LLYFTKLITSHVNQSRHDQALTVFHHIHSTLTLPLDPHVFSLVLKSCTALRRPFLGASIH 73
++ + L+++ + D+A VF ++ +P D +S ++++ LRR +
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 74 AHAAKSSFLSNPFIASALINLYGHCLSLTSARHLFDEI------PHRNEVVWNAMISLYA 127
A L + + L+ Y S+ A +F ++ P+ N ++ +++L+
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN--TYSVLLNLFG 363
Query: 128 HSPDSLPAALELFHLM---DVPPNESTFNPIIAALAAQNDGAFK-AIALYRRMLELELKP 183
S +LF M + P+ +T+N +I G FK + L+ M+E ++P
Sbjct: 364 QS-GRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG--EGGYFKEVVTLFHDMVEENIEP 420
Query: 184 RLITLLALLPACVNVAALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYG------------ 231
+ T ++ AC ++I Y NDIVP + +G+IEA+G
Sbjct: 421 DMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAF 480
Query: 232 -----------------------RCGCLVNSRNVFWKMRD--MDKDVVVWSSLISAYALH 266
R G + S + ++ D + ++ +++ I AY
Sbjct: 481 NTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQG 540
Query: 267 GEAKAALETFKEMEMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQ 315
G+ + A++T+ +ME + PD T VL S A D+ F M+
Sbjct: 541 GKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMK 589
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 121/303 (39%), Gaps = 50/303 (16%)
Query: 86 FIASALINLYGHCLSLTSARHLFDEIPHRNEVV------WNAMISLYAHSPDSLPAALEL 139
F +ALIN YG ++ L D + +NE + +N +I+ A L L
Sbjct: 177 FSYTALINAYGRNGRYETSLELLDRM--KNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 140 FHLM---DVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLELELKPRLITLLALLPACV 196
F M + P+ T+N +++A A + G +A ++R M + + P L T L+
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGD-EAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 197 NVAAL----NLIKEIHGYGIRNDIV-------------------------------PHPQ 221
+ L +L+ E+ G DI P+
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 222 LGSGLIEAYGRCGCLVNSRNVFWKMR--DMDKDVVVWSSLISAYALHGEAKAALETFKEM 279
S L+ +G+ G + R +F +M+ + D D ++ LI + G K + F +M
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Query: 280 EMAGVKPDGITFLGVLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGR 339
++PD T+ G++ AC G +DA M + + SS Y+ +++ +A
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAAL 472
Query: 340 LHE 342
E
Sbjct: 473 YEE 475
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 132 SLPAALELFHLMDVPPNEST------FNPIIAALAAQNDGAFKAIALYRRMLELELKPRL 185
++ ALE++ + P+EST N I++ L +N I L+ +M LKP +
Sbjct: 146 NVSKALEIYQSI---PDESTKINVYICNSILSCLV-KNGKLDSCIKLFDQMKRDGLKPDV 201
Query: 186 ITLLALLPACVNVA-----ALNLIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGCLVNSR 240
+T LL C+ V A+ LI E+ GI+ D V + G + A C N R
Sbjct: 202 VTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMY-----GTVLAI----CASNGR 252
Query: 241 -----NVFWKMR--DMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 293
N +M+ ++ +SSL+++Y+ G+ K A E EM+ G+ P+ +
Sbjct: 253 SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTT 312
Query: 294 VLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
+LK G D + + ++ G + Y L+D LS+AG+L E
Sbjct: 313 LLKVYIKGGLFDRSRELLSELE-SAGYAENEMPYCMLMDGLSKAGKLEE 360
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 14/229 (6%)
Query: 120 NAMISLYAHSPDSLPAALELFHLMDVPPNESTFNPIIAALAAQNDGAFKAIALYRRMLEL 179
N ++S A DS E+ + P+ T+N +I KA+ R M
Sbjct: 230 NGLVS--AMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ-KAMEKLRDMETR 286
Query: 180 ELKPRLITLLALLPACVNVAALN----LIKEIHGYGIRNDIVPHPQLGSGLIEAYGRCGC 235
+ IT + ++ AC + L +E+ GI+ VP P S +I + G
Sbjct: 287 GHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ---VP-PHAFSLVIGGLCKEGK 342
Query: 236 LVNSRNVFWKM--RDMDKDVVVWSSLISAYALHGEAKAALETFKEMEMAGVKPDGITFLG 293
L VF M + +V +++ LI YA G + A+ M G KPD +T+
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 294 VLKACSHAGFADDALCYFTRMQRDYGVEASSDHYSCLVDVLSRAGRLHE 342
V+ G ++AL YF + D G+ +S YS L+D L +AGR+ E
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDE 450