Miyakogusa Predicted Gene
- Lj0g3v0088649.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0088649.1 Non Chatacterized Hit- tr|G7INR8|G7INR8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,78.08,0,T-COMPLEX 11-RELATED,NULL; TESTIS-SPECIFIC PROTEIN
PBS13 (T-COMPLEX 11 ),T-complex 11; seg,NULL;
coi,NODE_60673_length_1079_cov_139.521774.path3.1
(279 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G22930.1 | Symbols: | T-complex protein 11 | chr1:8117521-81... 196 2e-50
AT4G09150.2 | Symbols: | T-complex protein 11 | chr4:5828753-58... 159 1e-39
AT4G09150.1 | Symbols: | T-complex protein 11 | chr4:5828753-58... 159 1e-39
AT1G22930.2 | Symbols: | T-complex protein 11 | chr1:8118049-81... 157 9e-39
>AT1G22930.1 | Symbols: | T-complex protein 11 |
chr1:8117521-8121854 FORWARD LENGTH=1131
Length = 1131
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 171/294 (58%), Gaps = 32/294 (10%)
Query: 9 EGRAAGIVMEFPVGDEESLSSPPRVPKRLRQRLLETEC---KSPSSVEEIEAKLRDAHLR 65
E R IV++ + + RVP+R+R+RLL ++C K+ SSV++IE KL AHLR
Sbjct: 3 EDRGEAIVLDISPEINNTPAVMMRVPRRIRERLL-SDCSNKKTVSSVQDIEDKLLHAHLR 61
Query: 66 RQKHYEELXXXXXXXXXXXXXXXXXXXXXXXXXXLEAKLQAAEQKRLSILTKXXXXXXXX 125
RQ+ Y + +EA+L AAEQKRL IL K
Sbjct: 62 RQQFYHNVSRKARAKPRSPSRSSDEELGQR----IEARLLAAEQKRLEILAKAQMRLAKL 117
Query: 126 XXXXXXXKNGVEMRHE----------------NEPNRMLILKAHRQRRASLRERASQSLM 169
K VE+R E E NRM ILKA Q+RA +ER SQS+M
Sbjct: 118 DELRQAAKTSVEIRSERERVKLGTQVESRVQKAEANRMKILKASHQKRACAKERTSQSMM 177
Query: 170 RRMAREIKYKECVRAAIHQKRVAAETKRLGLLEAEKKKARARVLQVRHVAKSVTHQREIE 229
RRMARE KYKE VRA+I+QKRVAAE KRLGLLEAEKKKARARV QVRHVA SV++QREIE
Sbjct: 178 RRMARESKYKERVRASINQKRVAAEKKRLGLLEAEKKKARARVQQVRHVANSVSNQREIE 237
Query: 230 RRKKKDELEDRLQRAKRQRAEYLRHRGR----LSAYAQENWIRMPKQAEYLYKK 279
R K +D+LED+LQRAKR R+E+LR R R +S Y M + A+ L +K
Sbjct: 238 RSKMRDKLEDKLQRAKRYRSEFLRQRRRQRDSISLYCD----MMQEDADLLSRK 287
>AT4G09150.2 | Symbols: | T-complex protein 11 |
chr4:5828753-5833475 FORWARD LENGTH=1098
Length = 1098
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 161/266 (60%), Gaps = 25/266 (9%)
Query: 8 PEGRAAGIVMEFPVGDEESLS--SPPRVPKRLRQRLLETECKSPSSVEEIEAKLRDAHLR 65
PE R GI + FPV +E++++ SP +P+RLR+R E KSP S EI++KLR+A LR
Sbjct: 4 PE-RLGGISLSFPVNEEDTVTTTSPKTLPRRLRRR--LLEPKSPVSAAEIDSKLREADLR 60
Query: 66 RQKHYEELXXXXXXXXXXXXXXXXXXXXXXXXXXLEAKLQAAEQKRLSILTKXXXXXXXX 125
RQ++YE L LE+KL AAEQKRLSIL K
Sbjct: 61 RQQYYESLSSKARPKMRSPRSGSIEELSQR----LESKLNAAEQKRLSILEKELARLAKM 116
Query: 126 XXXXXXXKNGVEMRHENE----------------PNRMLILKAHRQRRASLRERASQSLM 169
KNG+E R E E NRML+ KA QRRA+ R+RA+QSLM
Sbjct: 117 DEARQAAKNGLEQRVEKERDELESKVEERVLKAEKNRMLLFKAMAQRRAAKRQRAAQSLM 176
Query: 170 RRMAREIKYKECVRAAIHQKRVAAETKRLGLLEAEKKKARARVLQVRHVAKSVTHQREIE 229
++ +E +YKE VRAAI+QKR AAE+KR+G+LEAE+++A AR+ +V A SV Q+E E
Sbjct: 177 KKAIQETRYKESVRAAIYQKRAAAESKRMGILEAERRRANARLTRVFGAASSVRSQKEAE 236
Query: 230 RRKKKDELEDRLQRAKRQRAEYLRHR 255
RRK KD LE+RLQRAK+ +A+Y+R R
Sbjct: 237 RRKMKDRLEERLQRAKKLKAQYMRRR 262
>AT4G09150.1 | Symbols: | T-complex protein 11 |
chr4:5828753-5833475 FORWARD LENGTH=1097
Length = 1097
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 161/266 (60%), Gaps = 25/266 (9%)
Query: 8 PEGRAAGIVMEFPVGDEESLS--SPPRVPKRLRQRLLETECKSPSSVEEIEAKLRDAHLR 65
PE R GI + FPV +E++++ SP +P+RLR+R E KSP S EI++KLR+A LR
Sbjct: 4 PE-RLGGISLSFPVNEEDTVTTTSPKTLPRRLRRR--LLEPKSPVSAAEIDSKLREADLR 60
Query: 66 RQKHYEELXXXXXXXXXXXXXXXXXXXXXXXXXXLEAKLQAAEQKRLSILTKXXXXXXXX 125
RQ++YE L LE+KL AAEQKRLSIL K
Sbjct: 61 RQQYYESLSSKARPKMRSPRSGSIEELSQR----LESKLNAAEQKRLSILEKELARLAKM 116
Query: 126 XXXXXXXKNGVEMRHENE----------------PNRMLILKAHRQRRASLRERASQSLM 169
KNG+E R E E NRML+ KA QRRA+ R+RA+QSLM
Sbjct: 117 DEARQAAKNGLEQRVEKERDELESKVEERVLKAEKNRMLLFKAMAQRRAAKRQRAAQSLM 176
Query: 170 RRMAREIKYKECVRAAIHQKRVAAETKRLGLLEAEKKKARARVLQVRHVAKSVTHQREIE 229
++ +E +YKE VRAAI+QKR AAE+KR+G+LEAE+++A AR+ +V A SV Q+E E
Sbjct: 177 KKAIQETRYKESVRAAIYQKRAAAESKRMGILEAERRRANARLTRVFGAASSVRSQKEAE 236
Query: 230 RRKKKDELEDRLQRAKRQRAEYLRHR 255
RRK KD LE+RLQRAK+ +A+Y+R R
Sbjct: 237 RRKMKDRLEERLQRAKKLKAQYMRRR 262
>AT1G22930.2 | Symbols: | T-complex protein 11 |
chr1:8118049-8121854 FORWARD LENGTH=1020
Length = 1020
Score = 157 bits (396), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 108/141 (76%), Gaps = 8/141 (5%)
Query: 143 EPNRMLILKAHRQRRASLRERASQSLMRRMAREIKYKECVRAAIHQKRVAAETKRLGLLE 202
E NRM ILKA Q+RA +ER SQS+MRRMARE KYKE VRA+I+QKRVAAE KRLGLLE
Sbjct: 40 EANRMKILKASHQKRACAKERTSQSMMRRMARESKYKERVRASINQKRVAAEKKRLGLLE 99
Query: 203 AEKKKARARVLQVRHVAKSVTHQREIERRKKKDELEDRLQRAKRQRAEYLRHRGR----L 258
AEKKKARARV QVRHVA SV++QREIER K +D+LED+LQRAKR R+E+LR R R +
Sbjct: 100 AEKKKARARVQQVRHVANSVSNQREIERSKMRDKLEDKLQRAKRYRSEFLRQRRRQRDSI 159
Query: 259 SAYAQENWIRMPKQAEYLYKK 279
S Y M + A+ L +K
Sbjct: 160 SLYCD----MMQEDADLLSRK 176