Miyakogusa Predicted Gene
- Lj0g3v0088629.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0088629.1 tr|G7IPE1|G7IPE1_MEDTR Serine
hydroxymethyltransferase OS=Medicago truncatula GN=MTR_2g006570 PE=3
S,90.28,0,PLP-dependent transferases,Pyridoxal phosphate-dependent
transferase, major domain; seg,NULL;
SUBFAM,NODE_31526_length_2364_cov_86.197548.path3.1
(419 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G22020.1 | Symbols: SHM6 | serine hydroxymethyltransferase 6 ... 667 0.0
AT1G36370.1 | Symbols: SHM7 | serine hydroxymethyltransferase 7 ... 651 0.0
AT4G13930.1 | Symbols: SHM4 | serine hydroxymethyltransferase 4 ... 549 e-156
AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | Pyridoxal phosphate ... 532 e-151
AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | serine transhydroxymet... 450 e-126
AT5G26780.1 | Symbols: SHM2 | serine hydroxymethyltransferase 2 ... 445 e-125
AT5G26780.2 | Symbols: SHM2 | serine hydroxymethyltransferase 2 ... 435 e-122
AT5G26780.3 | Symbols: SHM2 | serine hydroxymethyltransferase 2 ... 435 e-122
AT4G32520.2 | Symbols: SHM3 | serine hydroxymethyltransferase 3 ... 429 e-120
AT4G32520.1 | Symbols: SHM3, AtSHMT3 | serine hydroxymethyltrans... 429 e-120
>AT1G22020.1 | Symbols: SHM6 | serine hydroxymethyltransferase 6 |
chr1:7754599-7757087 FORWARD LENGTH=599
Length = 599
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/422 (74%), Positives = 365/422 (86%), Gaps = 3/422 (0%)
Query: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIENLCCERALAAFNLDPKCWGVNVQPYSCT 60
MEALGSHLTNKYSEGMPGARYY GNQYID+IE LC ERALAAF L+ + WGVNVQPYSCT
Sbjct: 178 MEALGSHLTNKYSEGMPGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCT 237
Query: 61 SANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSASSIFFESLPYKVNPQSGY 120
SANFAV+TGLL PG+RIMGLD+PSGG+ SHGYYTP GKKVS +SIFFES PYKV+P++GY
Sbjct: 238 SANFAVFTGLLMPGERIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGY 297
Query: 121 VDYDKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGLIAAKE 180
+DYDKLEE+ALD+RPKILICGGSSYPR+W++ RFRHIADKCGAVL+ DMAQISGL+AAKE
Sbjct: 298 IDYDKLEEKALDYRPKILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKE 357
Query: 181 CSSPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGNESDQYDFEEKINFS 240
+PFDYCD+VTSTTHKSLRGPRGGIIFY++G KP+K+ I L+ + QYDFEEKINFS
Sbjct: 358 SPNPFDYCDIVTSTTHKSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFS 417
Query: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALATALLRKNCRLVTGGTD 300
VFPSLQGGPHNNHIAALAIALKQ A+PEYK YM+QVKKNA+ALA+AL+ + C+L+TGGTD
Sbjct: 418 VFPSLQGGPHNNHIAALAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTD 477
Query: 301 NHXXXXXXXXXXXXXKFFEKICEICHITLNKIAIFGENGTIIPGGVRIGTPAMTSRGCLE 360
NH K +EK+CE+CHIT+NK+AIF ENG I PGGVRIG+PAMTSRGCLE
Sbjct: 478 NHLLLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLE 537
Query: 361 PDFETMAEFLFRAVQIAS-KQREHGKFQS--LKGLESNRDILELRSRVESFATQFAMPGF 417
P+FETMA+FL+RA QIAS QREHGK Q LK + ++I +LR++VE+FATQFAMP F
Sbjct: 538 PEFETMADFLYRAAQIASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAF 597
Query: 418 DI 419
D+
Sbjct: 598 DM 599
>AT1G36370.1 | Symbols: SHM7 | serine hydroxymethyltransferase 7 |
chr1:13696240-13698576 REVERSE LENGTH=598
Length = 598
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/419 (75%), Positives = 356/419 (84%), Gaps = 3/419 (0%)
Query: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIENLCCERALAAFNLDPKCWGVNVQPYSCT 60
MEALGSHLTNKYSEGMPGARYY GNQYID+IENLC ERAL AF L+ WGVNVQPYSCT
Sbjct: 174 MEALGSHLTNKYSEGMPGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCT 233
Query: 61 SANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSASSIFFESLPYKVNPQSGY 120
SANFAVYTGLL PG+RIMGLD+PSGG+ SHGY TP GKK+SA+SIFFES PYKVNPQ+GY
Sbjct: 234 SANFAVYTGLLLPGERIMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGY 293
Query: 121 VDYDKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGLIAAKE 180
+DYDKLE++ALD+RPKILICGGSSYPR+WD+AR R IADKCGAVL+CDMA ISGL+A KE
Sbjct: 294 IDYDKLEDKALDYRPKILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKE 353
Query: 181 CSSPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGNESDQYDFEEKINFS 240
CS+PFD+CD+VTSTTHK LRGPRGGIIFYR+G K RK+G S + S YD EEKINF+
Sbjct: 354 CSNPFDHCDIVTSTTHKGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFA 413
Query: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALATALLRKNCRLVTGGTD 300
VFPSLQGGPHNNHIAALAIALKQVATPEYKAY+QQ+KKNAQALA ALLR+ CRLVTGGTD
Sbjct: 414 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTD 473
Query: 301 NHXXXXXXXXXXXXXKFFEKICEICHITLNKIAIFGENGTIIPGGVRIGTPAMTSRGCLE 360
NH K +EK+CE+CHITLNK AIFG+NGTI PGGVRIGTPAMT+RGC+E
Sbjct: 474 NHLLLWDLTPMGLTGKVYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIE 533
Query: 361 PDFETMAEFLFRAVQIASK-QREHGKFQS--LKGLESNRDILELRSRVESFATQFAMPG 416
DFETMA+FL +A QI S QREHGK +K L +N+DI ELR+RVE+FA Q+ MP
Sbjct: 534 SDFETMADFLIKAAQITSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQYEMPA 592
>AT4G13930.1 | Symbols: SHM4 | serine hydroxymethyltransferase 4 |
chr4:8048013-8050021 REVERSE LENGTH=471
Length = 471
Score = 549 bits (1415), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/420 (62%), Positives = 321/420 (76%), Gaps = 8/420 (1%)
Query: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIENLCCERALAAFNLDPKCWGVNVQPYSCT 60
+EALGS LTNKYSEG+PG RYYGGN++IDEIENLC RAL AF+ DP WGVNVQPYS +
Sbjct: 48 IEALGSALTNKYSEGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGS 107
Query: 61 SANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSASSIFFESLPYKVNPQSGY 120
ANFA YT LL P DRIMGLD PSGG+ +HGYYT GKK+SA+SI+FESLPYKVN +GY
Sbjct: 108 PANFAAYTALLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGY 167
Query: 121 VDYDKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGLIAAKE 180
+DYDKLEE+ALDFRPK+LICGGS+YPR+WDYARFR IADK GA+LLCDMA ISGL+AA+E
Sbjct: 168 IDYDKLEEKALDFRPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQE 227
Query: 181 CSSPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGNESDQYDFEEKINFS 240
++PF+YCDVVT+TTHKSLRGPR G+IFYRKG KP K+G E YDFE+KINF+
Sbjct: 228 AANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKKG-----QPEGAVYDFEDKINFA 282
Query: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALATALLRKNCRLVTGGTD 300
VFP+LQGGPHN+ I ALA+ALKQ TP +K Y +QVK NA AL L+ K ++VT GT+
Sbjct: 283 VFPALQGGPHNHQIGALAVALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTE 342
Query: 301 NHXXXXXXXXXXXXXKFFEKICEICHITLNKIAIFGENGTIIPGGVRIGTPAMTSRGCLE 360
NH EK+C++C ITLNK A+FG++ + PGGVRIG PAMTSRG +E
Sbjct: 343 NHLVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVE 402
Query: 361 PDFETMAEFLFRAVQIA-SKQREHGKFQS--LKGLESNRDILELRSRVESFATQFAMPGF 417
DFE + EFL RAV + Q+ +GK KGL +N+D+ +L++ VE F+ + MPGF
Sbjct: 403 KDFEQIGEFLSRAVTLTLDIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGF 462
>AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | Pyridoxal phosphate
(PLP)-dependent transferases superfamily protein |
chr4:8032146-8033718 REVERSE LENGTH=470
Length = 470
Score = 532 bits (1370), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/422 (60%), Positives = 316/422 (74%), Gaps = 8/422 (1%)
Query: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIENLCCERALAAFNLDPKCWGVNVQPYSCT 60
MEALGS LTNKYSEGMPG RYYGG ++IDEIE+LC R+L AF+ +P+ WGVNVQPYS +
Sbjct: 48 MEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGS 107
Query: 61 SANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSASSIFFESLPYKVNPQSGY 120
ANFA YT LL P DRIMGLD PSGG+ +HGYY+ GK +SA+SI+FE+LPYKV+ ++GY
Sbjct: 108 PANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGY 167
Query: 121 VDYDKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGLIAAKE 180
+DYDKLEE+A+DFRPK++ICGG+SYPREWDYARFR +ADK GA LLCDMA S L+AA+E
Sbjct: 168 IDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQE 227
Query: 181 CSSPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGNESDQYDFEEKINFS 240
+ PF+YCDVVT++THKSLRGPR G+IFYRKG KP K+G E + YDF+ KIN +
Sbjct: 228 AADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKG-----QPEGEVYDFDAKINSA 282
Query: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALATALLRKNCRLVTGGTD 300
VFP+LQ GPHNN I ALA+ALKQV P +K Y +QVK NA LA+ L+ K LVT GTD
Sbjct: 283 VFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTD 342
Query: 301 NHXXXXXXXXXXXXXKFFEKICEICHITLNKIAIFGENGTIIPGGVRIGTPAMTSRGCLE 360
NH EK+CE+C+ITLN+ A+FG+ + PGGVRIGTPAMTSRG +E
Sbjct: 343 NHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVE 402
Query: 361 PDFETMAEFLFRAVQIA-SKQREHGKFQSL--KGLESNRDILELRSRVESFATQFAMPGF 417
DFE + EFL RAV I Q ++GK KGL +N++I E+++ VE F F MPGF
Sbjct: 403 KDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGF 462
Query: 418 DI 419
I
Sbjct: 463 FI 464
>AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | serine
transhydroxymethyltransferase 1 | chr4:17831891-17834742
REVERSE LENGTH=517
Length = 517
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/426 (52%), Positives = 287/426 (67%), Gaps = 15/426 (3%)
Query: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIENLCCERALAAFNLDPKCWGVNVQPYSCT 60
M+A+GS +TNKYSEG PGARYYGGN+YID E LC +RAL AF LDP+ WGVNVQP S +
Sbjct: 91 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGS 150
Query: 61 SANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSASSIFFESLPYKVNPQSGY 120
ANF VYT LL P +RIM LD P GG+ SHGY T + KK+SA SIFFE++PY+++ +GY
Sbjct: 151 PANFHVYTALLKPHERIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLDESTGY 209
Query: 121 VDYDKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGLIAAKE 180
+DYD++E+ A FRPK+++ G S+Y R +DYAR R + +K AV+L DMA ISGL+AA
Sbjct: 210 IDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANV 269
Query: 181 CSSPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGNESDQYDFEEKINFS 240
SPFDY DVVT+TTHKSLRGPRG +IF+RKG K + QG E YDFE+KIN +
Sbjct: 270 IPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINK-----QGKEV-LYDFEDKINQA 323
Query: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALATALLRKNCRLVTGGTD 300
VFP LQGGPHN+ I LA+ALKQ T EYKAY +QV N+ A L+ + LV+GGTD
Sbjct: 324 VFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTD 383
Query: 301 NHXXXXXXXXXXXXXKFFEKICEICHITLNKIAIFGENGTIIPGGVRIGTPAMTSRGCLE 360
NH EK+ E HI NK + G+ ++PGG+R+GTPA+TSRG +E
Sbjct: 384 NHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVE 443
Query: 361 PDFETMAEFLFRAVQIASKQREHGKFQSLK----GLESN----RDILELRSRVESFATQF 412
DF +AE+ +AV IA K + + LK +ES+ +I +LR VE FA QF
Sbjct: 444 EDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQF 503
Query: 413 AMPGFD 418
GF+
Sbjct: 504 PTIGFE 509
>AT5G26780.1 | Symbols: SHM2 | serine hydroxymethyltransferase 2 |
chr5:9418299-9421725 FORWARD LENGTH=517
Length = 517
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/426 (52%), Positives = 287/426 (67%), Gaps = 15/426 (3%)
Query: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIENLCCERALAAFNLDPKCWGVNVQPYSCT 60
M+A+GS +TNKYSEG PGARYYGGN+YID E LC +RAL AF LDP WGVNVQ S +
Sbjct: 91 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGS 150
Query: 61 SANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSASSIFFESLPYKVNPQSGY 120
ANF VYT LL P +RIM LD P GG+ SHGY T + KK+SA SIFFE++PY+++ +GY
Sbjct: 151 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLDENTGY 209
Query: 121 VDYDKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGLIAAKE 180
+DYD+LE+ A+ FRPK+++ G S+Y R +DYAR R + +K AV+L DMA ISGL+AA
Sbjct: 210 IDYDQLEKSAVLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGV 269
Query: 181 CSSPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGNESDQYDFEEKINFS 240
SPF+Y DVVT+TTHKSLRGPRG +IF+RKG K + QG E YD+E++IN +
Sbjct: 270 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGLKEINK-----QGKEV-MYDYEDRINQA 323
Query: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALATALLRKNCRLVTGGTD 300
VFP LQGGPHN+ I LA+ALKQ TPEYKAY QV +N A LL K LV+GGTD
Sbjct: 324 VFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCSKFAETLLAKGYDLVSGGTD 383
Query: 301 NHXXXXXXXXXXXXXKFFEKICEICHITLNKIAIFGENGTIIPGGVRIGTPAMTSRGCLE 360
NH EK+ E+ HI NK + G+ ++PGG+R+GTPA+TSRG +E
Sbjct: 384 NHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIE 443
Query: 361 PDFETMAEFLFRAVQIASKQREHGKFQSLKG----LESNR----DILELRSRVESFATQF 412
DF +AE+ AV+IA K + + LK ++SN ++ +LR VE +A QF
Sbjct: 444 EDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQF 503
Query: 413 AMPGFD 418
GF+
Sbjct: 504 PTIGFE 509
>AT5G26780.2 | Symbols: SHM2 | serine hydroxymethyltransferase 2 |
chr5:9418299-9421725 FORWARD LENGTH=533
Length = 533
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/442 (50%), Positives = 287/442 (64%), Gaps = 31/442 (7%)
Query: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIENLCCERALAAFNLDPKCWGVNVQPYSCT 60
M+A+GS +TNKYSEG PGARYYGGN+YID E LC +RAL AF LDP WGVNVQ S +
Sbjct: 91 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGS 150
Query: 61 SANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSASSIFFESLPYKVNPQSGY 120
ANF VYT LL P +RIM LD P GG+ SHGY T + KK+SA SIFFE++PY+++ +GY
Sbjct: 151 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLDENTGY 209
Query: 121 VDYDKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGLIAAKE 180
+DYD+LE+ A+ FRPK+++ G S+Y R +DYAR R + +K AV+L DMA ISGL+AA
Sbjct: 210 IDYDQLEKSAVLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGV 269
Query: 181 CSSPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGNESDQYDFEEKINFS 240
SPF+Y DVVT+TTHKSLRGPRG +IF+RKG K + QG E YD+E++IN +
Sbjct: 270 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGLKEINK-----QGKEV-MYDYEDRINQA 323
Query: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALA---------------- 284
VFP LQGGPHN+ I LA+ALKQ TPEYKAY QV +N A
Sbjct: 324 VFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCSKFAELDIRPTVIISYGLSM 383
Query: 285 TALLRKNCRLVTGGTDNHXXXXXXXXXXXXXKFFEKICEICHITLNKIAIFGENGTIIPG 344
LL K LV+GGTDNH EK+ E+ HI NK + G+ ++PG
Sbjct: 384 QTLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPG 443
Query: 345 GVRIGTPAMTSRGCLEPDFETMAEFLFRAVQIASKQREHGKFQSLKG----LESNR---- 396
G+R+GTPA+TSRG +E DF +AE+ AV+IA K + + LK ++SN
Sbjct: 444 GIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQS 503
Query: 397 DILELRSRVESFATQFAMPGFD 418
++ +LR VE +A QF GF+
Sbjct: 504 EMSKLREMVEEYAKQFPTIGFE 525
>AT5G26780.3 | Symbols: SHM2 | serine hydroxymethyltransferase 2 |
chr5:9418299-9421725 FORWARD LENGTH=533
Length = 533
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/442 (50%), Positives = 287/442 (64%), Gaps = 31/442 (7%)
Query: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIENLCCERALAAFNLDPKCWGVNVQPYSCT 60
M+A+GS +TNKYSEG PGARYYGGN+YID E LC +RAL AF LDP WGVNVQ S +
Sbjct: 91 MQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGS 150
Query: 61 SANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSASSIFFESLPYKVNPQSGY 120
ANF VYT LL P +RIM LD P GG+ SHGY T + KK+SA SIFFE++PY+++ +GY
Sbjct: 151 PANFQVYTALLKPHERIMALDLPHGGHLSHGYQT-DTKKISAVSIFFETMPYRLDENTGY 209
Query: 121 VDYDKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGLIAAKE 180
+DYD+LE+ A+ FRPK+++ G S+Y R +DYAR R + +K AV+L DMA ISGL+AA
Sbjct: 210 IDYDQLEKSAVLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGV 269
Query: 181 CSSPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGNESDQYDFEEKINFS 240
SPF+Y DVVT+TTHKSLRGPRG +IF+RKG K + QG E YD+E++IN +
Sbjct: 270 IPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGLKEINK-----QGKEV-MYDYEDRINQA 323
Query: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALA---------------- 284
VFP LQGGPHN+ I LA+ALKQ TPEYKAY QV +N A
Sbjct: 324 VFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCSKFAELDIRPTVIISYGLSM 383
Query: 285 TALLRKNCRLVTGGTDNHXXXXXXXXXXXXXKFFEKICEICHITLNKIAIFGENGTIIPG 344
LL K LV+GGTDNH EK+ E+ HI NK + G+ ++PG
Sbjct: 384 QTLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPG 443
Query: 345 GVRIGTPAMTSRGCLEPDFETMAEFLFRAVQIASKQREHGKFQSLKG----LESNR---- 396
G+R+GTPA+TSRG +E DF +AE+ AV+IA K + + LK ++SN
Sbjct: 444 GIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQS 503
Query: 397 DILELRSRVESFATQFAMPGFD 418
++ +LR VE +A QF GF+
Sbjct: 504 EMSKLREMVEEYAKQFPTIGFE 525
>AT4G32520.2 | Symbols: SHM3 | serine hydroxymethyltransferase 3 |
chr4:15689642-15692334 REVERSE LENGTH=529
Length = 529
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/425 (49%), Positives = 281/425 (66%), Gaps = 24/425 (5%)
Query: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIENLCCERALAAFNLDPKCWGVNVQPYSCT 60
MEA+GS LTNKYSEG+PG RYYGGN+YID++E LC RALAAF LD WGVNVQP S +
Sbjct: 119 MEAVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGS 178
Query: 61 SANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSASSIFFESLPYKVNPQSGY 120
ANFAVYT +LSP DRIMGLD P GG+ SHG+ T ++VS +SI+FES+PY+++ +G
Sbjct: 179 PANFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAK-RRVSGTSIYFESMPYRLDESTGI 237
Query: 121 VDYDKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGLIAAKE 180
VDYD LE+ A FRPK++I G S+Y R++DY R R IAD GA L+ DMA ISGL+AA
Sbjct: 238 VDYDMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASV 297
Query: 181 CSSPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGNESDQYDFEEKINFS 240
+ PF+YCD+VT+TTHKSLRGPRGG+IF+RK + + D E +N +
Sbjct: 298 VADPFEYCDIVTTTTHKSLRGPRGGMIFFRK--------------DPINGVDLESAVNNA 343
Query: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALATALLRKNCRLVTGGTD 300
VFP LQGGPHN+ I LA+ LK +PE+KAY ++V N +ALA L+ +LV+GG+D
Sbjct: 344 VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSD 403
Query: 301 NHXXXXXXXXXXXXXKFFEKICEICHITLNKIAIFGENGTIIPGGVRIGTPAMTSRGCLE 360
NH EKI ++ ITLNK ++ G+ ++PGG+RIG+PAMT+RG E
Sbjct: 404 NHLVLVDLRPMGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSE 463
Query: 361 PDFETMAEFLFRAVQIA---------SKQREHGKFQSLKGLESNRDILELRSRVESFATQ 411
DF +A+F+ V+I SK ++ KF + + L+ RVE+F ++
Sbjct: 464 KDFVVVADFIKEGVEITMEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSR 523
Query: 412 FAMPG 416
F +PG
Sbjct: 524 FPIPG 528
>AT4G32520.1 | Symbols: SHM3, AtSHMT3 | serine
hydroxymethyltransferase 3 | chr4:15689642-15692334
REVERSE LENGTH=529
Length = 529
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/425 (49%), Positives = 281/425 (66%), Gaps = 24/425 (5%)
Query: 1 MEALGSHLTNKYSEGMPGARYYGGNQYIDEIENLCCERALAAFNLDPKCWGVNVQPYSCT 60
MEA+GS LTNKYSEG+PG RYYGGN+YID++E LC RALAAF LD WGVNVQP S +
Sbjct: 119 MEAVGSCLTNKYSEGLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGS 178
Query: 61 SANFAVYTGLLSPGDRIMGLDTPSGGNTSHGYYTPNGKKVSASSIFFESLPYKVNPQSGY 120
ANFAVYT +LSP DRIMGLD P GG+ SHG+ T ++VS +SI+FES+PY+++ +G
Sbjct: 179 PANFAVYTAILSPHDRIMGLDLPHGGHLSHGFMTAK-RRVSGTSIYFESMPYRLDESTGI 237
Query: 121 VDYDKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLLCDMAQISGLIAAKE 180
VDYD LE+ A FRPK++I G S+Y R++DY R R IAD GA L+ DMA ISGL+AA
Sbjct: 238 VDYDMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADSVGAFLMMDMAHISGLVAASV 297
Query: 181 CSSPFDYCDVVTSTTHKSLRGPRGGIIFYRKGTKPRKRGILLSQGNESDQYDFEEKINFS 240
+ PF+YCD+VT+TTHKSLRGPRGG+IF+RK + + D E +N +
Sbjct: 298 VADPFEYCDIVTTTTHKSLRGPRGGMIFFRK--------------DPINGVDLESAVNNA 343
Query: 241 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALATALLRKNCRLVTGGTD 300
VFP LQGGPHN+ I LA+ LK +PE+KAY ++V N +ALA L+ +LV+GG+D
Sbjct: 344 VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVSNCRALANRLVELGFKLVSGGSD 403
Query: 301 NHXXXXXXXXXXXXXKFFEKICEICHITLNKIAIFGENGTIIPGGVRIGTPAMTSRGCLE 360
NH EKI ++ ITLNK ++ G+ ++PGG+RIG+PAMT+RG E
Sbjct: 404 NHLVLVDLRPMGMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSE 463
Query: 361 PDFETMAEFLFRAVQIA---------SKQREHGKFQSLKGLESNRDILELRSRVESFATQ 411
DF +A+F+ V+I SK ++ KF + + L+ RVE+F ++
Sbjct: 464 KDFVVVADFIKEGVEITMEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSR 523
Query: 412 FAMPG 416
F +PG
Sbjct: 524 FPIPG 528