Miyakogusa Predicted Gene

Lj0g3v0088419.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0088419.2 tr|C7IY37|C7IY37_ORYSJ Os02g0519300 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os02g05193,50,1e-18,seg,NULL; coiled-coil,NULL,CUFF.4738.2
         (190 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G10010.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   224   2e-59
AT5G64910.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   168   2e-42
AT5G64910.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   168   2e-42

>AT5G10010.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: nucleolus;
           EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
           growth stages; BEST Arabidopsis thaliana protein match
           is: unknown protein (TAIR:AT5G64910.1); Has 33260 Blast
           hits to 16857 proteins in 1270 species: Archae - 88;
           Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants -
           1371; Viruses - 424; Other Eukaryotes - 13285 (source:
           NCBI BLink). | chr5:3128098-3131452 FORWARD LENGTH=434
          Length = 434

 Score =  224 bits (572), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 109/191 (57%), Positives = 136/191 (71%), Gaps = 2/191 (1%)

Query: 1   MKQMKMDWVPYIPLENRESQVDRLKSQIFILSCTQRRAALKHMKIDRVKKYDYCLPYFYD 60
           MK+MKMDW+PYIP+E R+ QVD++ SQIF L CTQRR+AL+HMK D++KK++YCLPYFY 
Sbjct: 245 MKKMKMDWLPYIPIEKRDRQVDKMNSQIFTLGCTQRRSALRHMKEDQLKKFEYCLPYFYQ 304

Query: 61  PFKEDELEQSTEVPILFPAEPNPVVCGFDWELDELEEFTDKLIQKEVLSEDHKDAFKEFA 120
           PFKEDELEQSTEV I+FP+EP PVVC FDWE DEL+EF DKL+++E L  +  D FKE+ 
Sbjct: 305 PFKEDELEQSTEVQIMFPSEP-PVVCEFDWEFDELQEFVDKLVEEEALPAEQADEFKEYV 363

Query: 121 KEKVXXXXXXXXXXXXXXXXXXXXXXXXTKAVIKNKRSYKFYPVKSPDTPDVS-MKSRYI 179
           KE+V                        TK   +  + YKFYP  SPDTPDVS ++S +I
Sbjct: 364 KEQVRAAKKANREAKDARKKAIEEMSEDTKQAFQKMKFYKFYPQPSPDTPDVSGVQSPFI 423

Query: 180 NRYYGNANEEL 190
           NRYYG A+E L
Sbjct: 424 NRYYGKAHEVL 434


>AT5G64910.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G10010.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:25940900-25944114
           FORWARD LENGTH=487
          Length = 487

 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 88/173 (50%), Positives = 107/173 (61%), Gaps = 1/173 (0%)

Query: 1   MKQMKMDWVPYIPLENRESQVDRLKSQIFILSCTQRRAALKHMKIDRVKKYDYCLPYFYD 60
           MK MKM WVPYIPLE R+ QVD     IFIL CTQRR+ALKH+  DRVKK++YCLPY  +
Sbjct: 284 MKTMKMAWVPYIPLEQRDRQVDNKNFPIFILGCTQRRSALKHLPDDRVKKFNYCLPYINN 343

Query: 61  PFKEDELEQSTEVPILFPAEPNPVVCGFDWELDELEEFTDKLIQKEVLSEDHKDAFKEFA 120
           P+K D+ E+ST V I+FP+EP PV C +DW    +EEFTD LI +EVL  + K AF+EF 
Sbjct: 344 PYKVDDSEKSTVVKIMFPSEP-PVECEYDWVKSVIEEFTDSLINEEVLLPEQKVAFEEFV 402

Query: 121 KEKVXXXXXXXXXXXXXXXXXXXXXXXXTKAVIKNKRSYKFYPVKSPDTPDVS 173
           KEK                         TK   +  R YKFYP+ SPDTP  +
Sbjct: 403 KEKSDKAMAAYDTAQEALEKAKEGLSEETKKAYQEMRLYKFYPLPSPDTPHTA 455


>AT5G64910.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; BEST Arabidopsis thaliana
           protein match is: unknown protein (TAIR:AT5G10010.1). |
           chr5:25940900-25944114 FORWARD LENGTH=484
          Length = 484

 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 88/173 (50%), Positives = 107/173 (61%), Gaps = 1/173 (0%)

Query: 1   MKQMKMDWVPYIPLENRESQVDRLKSQIFILSCTQRRAALKHMKIDRVKKYDYCLPYFYD 60
           MK MKM WVPYIPLE R+ QVD     IFIL CTQRR+ALKH+  DRVKK++YCLPY  +
Sbjct: 281 MKTMKMAWVPYIPLEQRDRQVDNKNFPIFILGCTQRRSALKHLPDDRVKKFNYCLPYINN 340

Query: 61  PFKEDELEQSTEVPILFPAEPNPVVCGFDWELDELEEFTDKLIQKEVLSEDHKDAFKEFA 120
           P+K D+ E+ST V I+FP+EP PV C +DW    +EEFTD LI +EVL  + K AF+EF 
Sbjct: 341 PYKVDDSEKSTVVKIMFPSEP-PVECEYDWVKSVIEEFTDSLINEEVLLPEQKVAFEEFV 399

Query: 121 KEKVXXXXXXXXXXXXXXXXXXXXXXXXTKAVIKNKRSYKFYPVKSPDTPDVS 173
           KEK                         TK   +  R YKFYP+ SPDTP  +
Sbjct: 400 KEKSDKAMAAYDTAQEALEKAKEGLSEETKKAYQEMRLYKFYPLPSPDTPHTA 452