Miyakogusa Predicted Gene
- Lj0g3v0087079.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0087079.1 tr|B7FMP7|B7FMP7_MEDTR Auxin-induced protein
OS=Medicago truncatula GN=MTR_1g070830 PE=2 SV=1,79.29,0,seg,NULL;
IAA_ARF,Aux/IAA-ARF-dimerisation; FAMILY NOT NAMED,NULL;
AUX_IAA,AUX/IAA protein; CAD & PB,CUFF.4745.1
(189 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional... 234 3e-62
AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional regu... 222 1e-58
AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |... 213 8e-56
AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducib... 198 2e-51
AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional reg... 175 2e-44
AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 172 9e-44
AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein... 172 1e-43
AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducib... 172 2e-43
AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated prot... 168 2e-42
AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein ... 155 2e-38
AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein ... 153 7e-38
AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein ... 152 1e-37
AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein ... 152 1e-37
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-aceti... 150 4e-37
AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 | chr... 148 2e-36
AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid induci... 146 8e-36
AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 145 1e-35
AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |... 145 1e-35
AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 | chr... 139 8e-34
AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 119 9e-28
AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15... 119 1e-27
AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 116 1e-26
AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 115 1e-26
AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 115 1e-26
AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11... 115 2e-26
AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 | chr2:1... 112 2e-25
AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 107 4e-24
AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated prot... 105 1e-23
AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18... 105 2e-23
AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induci... 99 2e-21
AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31... 98 3e-21
AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein... 97 5e-21
AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20... 87 8e-18
AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30... 85 3e-17
AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29... 70 7e-13
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 64 6e-11
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 64 8e-11
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 63 1e-10
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 60 1e-09
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 59 2e-09
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 59 2e-09
AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34... 55 2e-08
AT1G04550.1 | Symbols: IAA12, BDL | AUX/IAA transcriptional regu... 51 4e-07
AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32... 51 5e-07
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 50 1e-06
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 50 1e-06
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 50 1e-06
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 50 1e-06
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 49 1e-06
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 49 1e-06
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 49 2e-06
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 48 3e-06
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 47 5e-06
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 47 5e-06
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 47 5e-06
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 47 6e-06
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 47 1e-05
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | AUX/IAA transcriptional
regulator family protein | chr5:17550465-17551206
FORWARD LENGTH=186
Length = 186
Score = 234 bits (596), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/189 (64%), Positives = 141/189 (74%), Gaps = 18/189 (9%)
Query: 4 YETEMNLKATELRLGLPGRDELENAVVRC---NKRSSPEAXXXXXXXXXXXXXXITSDDK 60
Y+ +NLKATELRLGLPG +E V C NKR PEA ++
Sbjct: 7 YDELVNLKATELRLGLPGTEE----TVSCGKSNKRVLPEATEKEIE---------STGKT 53
Query: 61 DSAPPAKAQVVGWPPVRSFRKNSMQQKKGE--GAGMYVKVSMAGAPYLRKIDLKVYKSYP 118
++A P KAQ+VGWPPVRS+RKN++Q KK E G G YVKVSM GAPYLRKIDL +YK YP
Sbjct: 54 ETASPPKAQIVGWPPVRSYRKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYP 113
Query: 119 ELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIM 178
EL+K+LENMFK + GEY EREGY GS++VPTYEDKDGDWMLVGDVPW+MF+SSCKRLRIM
Sbjct: 114 ELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIM 173
Query: 179 KGSEAKGLG 187
KGSE KGLG
Sbjct: 174 KGSEVKGLG 182
>AT1G04240.1 | Symbols: SHY2, IAA3 | AUX/IAA transcriptional
regulator family protein | chr1:1128564-1129319 REVERSE
LENGTH=189
Length = 189
Score = 222 bits (565), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 134/187 (71%), Gaps = 12/187 (6%)
Query: 8 MNLKATELRLGLPGRDELENAVVR---CNKRSSPEAXXXXXXXXXXXXXXITSDDKDSAP 64
+NLK TELRLGLPG D + A R CN + +S +++P
Sbjct: 5 VNLKETELRLGLPGTDNVCEAKERVSCCNNNNK-----RVLSTDTEKEIESSSRKTETSP 59
Query: 65 PAKAQVVGWPPVRSFRKNSMQQKKGE----GAGMYVKVSMAGAPYLRKIDLKVYKSYPEL 120
P KAQ+VGWPPVRS+RKN++Q KK E G G+YVKVSM GAPYLRKIDL YK Y EL
Sbjct: 60 PRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSEL 119
Query: 121 LKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKG 180
LKALE MFK + GEY ER+GY GS++VPTYEDKDGDWML+GDVPW+MF+ +CKRLRIMKG
Sbjct: 120 LKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKG 179
Query: 181 SEAKGLG 187
SEAKGLG
Sbjct: 180 SEAKGLG 186
>AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 |
chr3:8181069-8181685 REVERSE LENGTH=174
Length = 174
Score = 213 bits (541), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 126/183 (68%), Gaps = 21/183 (11%)
Query: 6 TEMNLKATELRLGLPGRDEL--ENAVVRCNKRSSPEAXXXXXXXXXXXXXXITSDDKDSA 63
E+NLK TEL LGLPGR E E V C K ++ T D+++S
Sbjct: 7 NELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEE------------TRDEEEST 54
Query: 64 PPAKAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKA 123
PP K Q+VGWPPVRS RKN+ + YVKVSM GAPYLRKIDLK YK+YPELLKA
Sbjct: 55 PPTKTQIVGWPPVRSSRKNN-------NSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKA 107
Query: 124 LENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEA 183
LENMFK GEY EREGY GS +VPTYEDKDGDWMLVGDVPWDMF SSCKRLRIMKGS+A
Sbjct: 108 LENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDA 167
Query: 184 KGL 186
L
Sbjct: 168 PAL 170
>AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducible
| chr4:8361182-8361780 FORWARD LENGTH=168
Length = 168
Score = 198 bits (503), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 127/179 (70%), Gaps = 24/179 (13%)
Query: 8 MNLKATELRLGLPGRDE---LENAVVRCNKRSSPEAXXXXXXXXXXXXXXITSDDKDSAP 64
+NLK TELRLGLPG E LE + VR N + S ++ + P
Sbjct: 7 LNLKDTELRLGLPGAQEEQQLELSCVRSNNKRKNN----------------DSTEESAPP 50
Query: 65 PAKAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKAL 124
PAK Q+VGWPPVRS RKN+ + YVKVSM GAPYLRKIDLK+YK+YPELLKAL
Sbjct: 51 PAKTQIVGWPPVRSNRKNNNNKNV-----SYVKVSMDGAPYLRKIDLKMYKNYPELLKAL 105
Query: 125 ENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEA 183
ENMFK T GEYSEREGY GS +VPTYEDKDGDWMLVGDVPWDMF SSC++LRIMKGSEA
Sbjct: 106 ENMFKFTVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
>AT1G04250.1 | Symbols: AXR3, IAA17 | AUX/IAA transcriptional
regulator family protein | chr1:1136382-1138340 FORWARD
LENGTH=229
Length = 229
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 125/216 (57%), Gaps = 36/216 (16%)
Query: 6 TEMNLKATELRLGLPGRDELENAVVRCNKRSSPEAXXX--------XXXXXXXXXXXITS 57
E+NL+ TEL LGLPG D + A V NKR E +T
Sbjct: 5 VELNLRETELCLGLPGGDTV--APVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVVTF 62
Query: 58 DDKDSA--------PPAKAQVVGWPPVRSFRKNSM----QQKKGEGAGMYVKVSMAGAPY 105
D K+ + PPAKAQVVGWPPVRS+RKN M + G A +VKVSM GAPY
Sbjct: 63 DSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAAAFVKVSMDGAPY 122
Query: 106 LRKIDLKVYKSYPELLKALENMFKC-TFGEYSEREG-------------YNGSEYVPTYE 151
LRKIDL++YKSY EL AL NMF T G++ EG N +YVP+YE
Sbjct: 123 LRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYE 182
Query: 152 DKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
DKDGDWMLVGDVPW MF+ +CKRLR+MKGS+A GL
Sbjct: 183 DKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLA 218
>AT3G23050.1 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196716 FORWARD LENGTH=243
Length = 243
Score = 172 bits (437), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 122/227 (53%), Gaps = 48/227 (21%)
Query: 8 MNLKATELRLGLPGRDEL----------------ENAVVRCNKRSSPEAXXXXXXXXXXX 51
MNLKATEL LGLPG E E + N +S+ E
Sbjct: 6 MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAVP 65
Query: 52 XXXITSDDKDSAPPAKAQVVGWPPVRSFRKNSM-QQKKGEGA-----------------G 93
T D S PPAKAQVVGWPPVR++RKN M QQK GA
Sbjct: 66 KEKTTLKDP-SKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGA 124
Query: 94 MYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKC-TFGEYSER------------EG 140
VKVSM GAPYLRK+DLK+YKSY +L AL MF T G Y +
Sbjct: 125 GLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNL 184
Query: 141 YNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
N SEYVP+YEDKDGDWMLVGDVPW+MF+ SCKRLRIMKGSEA GL
Sbjct: 185 LNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLA 231
>AT3G04730.1 | Symbols: IAA16 | indoleacetic acid-induced protein 16
| chr3:1288993-1290415 REVERSE LENGTH=236
Length = 236
Score = 172 bits (436), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 122/223 (54%), Gaps = 44/223 (19%)
Query: 8 MNLKATELRLGLPGRDELENAVVRCN-KRSSPEAXXXXXXXXXXXXXXITSDD------K 60
+N +ATELRLGLPG + + N KR E ++ D K
Sbjct: 2 INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61
Query: 61 DSAPPAKAQVVGWPPVRSFRKNSMQ-QKKGEGAGM-----------------------YV 96
PPAKAQVVGWPPVRSFRKN M QK G YV
Sbjct: 62 VVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYV 121
Query: 97 KVSMAGAPYLRKIDLKVYKSYPELLKALENMFKC-TFGEYSER------------EGYNG 143
KVSM GAPYLRKIDLK+YK+Y +L AL MF T G Y + + NG
Sbjct: 122 KVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNG 181
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
S+YVPTYEDKDGDWMLVGDVPW+MF+ SCKR+RIMKGSEA GL
Sbjct: 182 SDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGL 224
>AT4G14550.1 | Symbols: IAA14, SLR | indole-3-acetic acid inducible
14 | chr4:8348521-8349923 REVERSE LENGTH=228
Length = 228
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 122/216 (56%), Gaps = 37/216 (17%)
Query: 8 MNLKATELRLGLPGRDELENAVVRC---NKRSSPEAXXXXXXXXXXXXXXITSDD----- 59
MNLK TEL LGLPG E + + NKR E + +
Sbjct: 1 MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60
Query: 60 -----KD-SAPPAKAQVVGWPPVRSFRKNSM-QQKKGE---------GAGMYVKVSMAGA 103
KD S PPAKAQVVGWPPVR++RKN M QK GE G +VKVSM GA
Sbjct: 61 EKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGA 120
Query: 104 PYLRKIDLKVYKSYPELLKALENMFKC-TFGEYSER------------EGYNGSEYVPTY 150
PYLRK+DLK+Y SY +L AL MF T G Y + + N SEYVP+Y
Sbjct: 121 PYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSY 180
Query: 151 EDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
EDKDGDWMLVGDVPW MF+ SCKRLRIMKGSEA GL
Sbjct: 181 EDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGL 216
>AT4G29080.1 | Symbols: PAP2, IAA27 | phytochrome-associated protein
2 | chr4:14323665-14325213 REVERSE LENGTH=305
Length = 305
Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 102/159 (64%), Gaps = 33/159 (20%)
Query: 62 SAPPAKAQVVGWPPVRSFRKNSMQQKKGEGAG------------------MYVKVSMAGA 103
+AP +KAQVVGWPP+RSFRKNSM + + G +YVKVSM GA
Sbjct: 136 TAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGA 195
Query: 104 PYLRKIDLKVYKSYPELLKALENMFKC-TFGEYSE-----REGYN---------GSEYVP 148
PYLRKIDLK YKSY EL ALE MF C T G++ R+G N GSEYV
Sbjct: 196 PYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVV 255
Query: 149 TYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
TYEDKD DWMLVGDVPW+MF+ SCK+LRIMK SEA GL
Sbjct: 256 TYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLA 294
>AT2G22670.2 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=319
Length = 319
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 102/153 (66%), Gaps = 27/153 (17%)
Query: 61 DSAPPAKAQVVGWPPVRSFRKNSMQQ-----------KKGEGAGMYVKVSMAGAPYLRKI 109
++AP AKAQVVGWPP+RS+RKN+M K G G ++VKVSM GAPYLRK+
Sbjct: 157 NNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGV-LFVKVSMDGAPYLRKV 215
Query: 110 DLKVYKSYPELLKALENMFKC-TFG--------------EYSEREGYNGSEYVPTYEDKD 154
DL+ Y SY +L ALE MF C T G E ++ +GSE+V TYEDKD
Sbjct: 216 DLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKD 275
Query: 155 GDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
GDWMLVGDVPW++F +C++L+IMKGS++ GLG
Sbjct: 276 GDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLG 308
>AT2G22670.4 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9636877-9638459 FORWARD LENGTH=338
Length = 338
Score = 153 bits (386), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 101/152 (66%), Gaps = 27/152 (17%)
Query: 61 DSAPPAKAQVVGWPPVRSFRKNSMQQ-----------KKGEGAGMYVKVSMAGAPYLRKI 109
++AP AKAQVVGWPP+RS+RKN+M K G G ++VKVSM GAPYLRK+
Sbjct: 174 NNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGV-LFVKVSMDGAPYLRKV 232
Query: 110 DLKVYKSYPELLKALENMFKC-TFG--------------EYSEREGYNGSEYVPTYEDKD 154
DL+ Y SY +L ALE MF C T G E ++ +GSE+V TYEDKD
Sbjct: 233 DLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKD 292
Query: 155 GDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
GDWMLVGDVPW++F +C++L+IMKGS++ GL
Sbjct: 293 GDWMLVGDVPWEIFTETCQKLKIMKGSDSIGL 324
>AT2G22670.3 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 101/152 (66%), Gaps = 27/152 (17%)
Query: 61 DSAPPAKAQVVGWPPVRSFRKNSMQQ-----------KKGEGAGMYVKVSMAGAPYLRKI 109
++AP AKAQVVGWPP+RS+RKN+M K G G ++VKVSM GAPYLRK+
Sbjct: 157 NNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGV-LFVKVSMDGAPYLRKV 215
Query: 110 DLKVYKSYPELLKALENMFKC-TFG--------------EYSEREGYNGSEYVPTYEDKD 154
DL+ Y SY +L ALE MF C T G E ++ +GSE+V TYEDKD
Sbjct: 216 DLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKD 275
Query: 155 GDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
GDWMLVGDVPW++F +C++L+IMKGS++ GL
Sbjct: 276 GDWMLVGDVPWEIFTETCQKLKIMKGSDSIGL 307
>AT2G22670.1 | Symbols: IAA8 | indoleacetic acid-induced protein 8 |
chr2:9637136-9638459 FORWARD LENGTH=321
Length = 321
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 101/152 (66%), Gaps = 27/152 (17%)
Query: 61 DSAPPAKAQVVGWPPVRSFRKNSMQQ-----------KKGEGAGMYVKVSMAGAPYLRKI 109
++AP AKAQVVGWPP+RS+RKN+M K G G ++VKVSM GAPYLRK+
Sbjct: 157 NNAPAAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGV-LFVKVSMDGAPYLRKV 215
Query: 110 DLKVYKSYPELLKALENMFKC-TFG--------------EYSEREGYNGSEYVPTYEDKD 154
DL+ Y SY +L ALE MF C T G E ++ +GSE+V TYEDKD
Sbjct: 216 DLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKD 275
Query: 155 GDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
GDWMLVGDVPW++F +C++L+IMKGS++ GL
Sbjct: 276 GDWMLVGDVPWEIFTETCQKLKIMKGSDSIGL 307
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | indole-3-acetic
acid inducible 5 | chr1:5365764-5366460 REVERSE
LENGTH=163
Length = 163
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 109/186 (58%), Gaps = 24/186 (12%)
Query: 1 MENYETEMNLKATELRLGLPGRDELENAVVRCNKRSSPEAXXXXXXXXXXXXXXITSDDK 60
M N + L+ TELRLGLPG + + KR+SPE D
Sbjct: 1 MANESNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEI----------------DL 44
Query: 61 DSAPPAKAQVVGWPPVRSFR-KNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPE 119
P K+QVVGWPPV S+R KNS+++ K YVKVS+ GA +LRKIDL++YK Y +
Sbjct: 45 KCEPAKKSQVVGWPPVCSYRRKNSLERTKSS----YVKVSVDGAAFLRKIDLEMYKCYQD 100
Query: 120 LLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMK 179
L AL+ +F C + + SE VP YEDKDGDWML GDVPW+MF+ SCKRLRIMK
Sbjct: 101 LASALQILFGCYI---NFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMK 157
Query: 180 GSEAKG 185
S +G
Sbjct: 158 RSCNRG 163
>AT1G52830.1 | Symbols: IAA6, SHY1 | indole-3-acetic acid 6 |
chr1:19672670-19673559 REVERSE LENGTH=189
Length = 189
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 107/183 (58%), Gaps = 6/183 (3%)
Query: 8 MNLKATELRLGLPGRDELENAVV---RCNKRSSPEAXXXXXXXXXXXXXXITSDDKDSAP 64
+ L+ TELRLGLPG + E +V + KR + ++S + +S P
Sbjct: 6 LALEITELRLGLPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVEDESLP 65
Query: 65 PAKAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKAL 124
K+Q VGWPPV S+R+ ++ + G YVKVSM G PY+RKIDL SY L+ L
Sbjct: 66 VVKSQAVGWPPVCSYRRKKNNEEASKAIG-YVKVSMDGVPYMRKIDLGSSNSYINLVTVL 124
Query: 125 ENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAK 184
EN+F C G +EG EY+ YEDKD DWMLVGDVPW MF SCKRLRI+K S+A
Sbjct: 125 ENLFGC-LGIGVAKEGKK-CEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDAT 182
Query: 185 GLG 187
G G
Sbjct: 183 GFG 185
>AT3G15540.1 | Symbols: IAA19, MSG2 | indole-3-acetic acid inducible
19 | chr3:5264100-5265378 FORWARD LENGTH=197
Length = 197
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 111/188 (59%), Gaps = 12/188 (6%)
Query: 8 MNLKATELRLGLPGRDELENAVVRCNKRSSPEAXXXXXXXXXXX-XXXITSDDKDS---- 62
+ L+ TELRLGLPGRD E + KR+ E + S D+
Sbjct: 6 LGLEITELRLGLPGRDVAEKMM---KKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEKVN 62
Query: 63 -APPAKAQVVGWPPVRSFRK-NSMQQKKGEGAGM-YVKVSMAGAPYLRKIDLKVYKSYPE 119
+P AK+QVVGWPPV S+RK NS ++ G+ YVKVSM G PYLRK+DL + Y +
Sbjct: 63 DSPAAKSQVVGWPPVCSYRKKNSCKEASTTKVGLGYVKVSMDGVPYLRKMDLGSSQGYDD 122
Query: 120 LLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMK 179
L AL+ +F + ++G N EYV YEDKDGDWML GDVPW MF+ SCKRLRIMK
Sbjct: 123 LAFALDKLFGFRGIGVALKDGDN-CEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMK 181
Query: 180 GSEAKGLG 187
S+A G G
Sbjct: 182 RSDATGFG 189
>AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=338
Length = 338
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 94/147 (63%), Gaps = 26/147 (17%)
Query: 66 AKAQVVGWPPVRSFRKNSMQQ----------KKGEGAGMYVKVSMAGAPYLRKIDLKVYK 115
AKAQ+VGWPPVRS+RKN++ + G GA ++VKVSM GAPYLRK+DL+ Y
Sbjct: 180 AKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGA-LFVKVSMDGAPYLRKVDLRSYT 238
Query: 116 SYPELLKALENMF---------------KCTFGEYSEREGYNGSEYVPTYEDKDGDWMLV 160
+Y EL ALE MF K E ++ NG +YV TYEDKDGDWMLV
Sbjct: 239 NYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLV 298
Query: 161 GDVPWDMFMSSCKRLRIMKGSEAKGLG 187
GDVPW+MF+ CK+L+IMKG +A GL
Sbjct: 299 GDVPWEMFIDVCKKLKIMKGCDAIGLA 325
>AT5G65670.2 | Symbols: IAA9 | indole-3-acetic acid inducible 9 |
chr5:26254463-26256134 FORWARD LENGTH=336
Length = 336
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 94/147 (63%), Gaps = 26/147 (17%)
Query: 66 AKAQVVGWPPVRSFRKNSMQQ----------KKGEGAGMYVKVSMAGAPYLRKIDLKVYK 115
AKAQ+VGWPPVRS+RKN++ + G GA ++VKVSM GAPYLRK+DL+ Y
Sbjct: 180 AKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGA-LFVKVSMDGAPYLRKVDLRSYT 238
Query: 116 SYPELLKALENMF---------------KCTFGEYSEREGYNGSEYVPTYEDKDGDWMLV 160
+Y EL ALE MF K E ++ NG +YV TYEDKDGDWMLV
Sbjct: 239 NYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLV 298
Query: 161 GDVPWDMFMSSCKRLRIMKGSEAKGLG 187
GDVPW+MF+ CK+L+IMKG +A GL
Sbjct: 299 GDVPWEMFIDVCKKLKIMKGCDAIGLA 325
>AT3G23050.2 | Symbols: IAA7, AXR2 | indole-3-acetic acid 7 |
chr3:8194768-8196214 FORWARD LENGTH=210
Length = 210
Score = 139 bits (351), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 104/206 (50%), Gaps = 48/206 (23%)
Query: 8 MNLKATELRLGLPGRDEL----------------ENAVVRCNKRSSPEAXXXXXXXXXXX 51
MNLKATEL LGLPG E E + N +S+ E
Sbjct: 6 MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAVP 65
Query: 52 XXXITSDDKDSAPPAKAQVVGWPPVRSFRKNSM-QQKKGEGA-----------------G 93
T D S PPAKAQVVGWPPVR++RKN M QQK GA
Sbjct: 66 KEKTTLKDP-SKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGA 124
Query: 94 MYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKC-TFGEYSER------------EG 140
VKVSM GAPYLRK+DLK+YKSY +L AL MF T G Y +
Sbjct: 125 GLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNL 184
Query: 141 YNGSEYVPTYEDKDGDWMLVGDVPWD 166
N SEYVP+YEDKDGDWMLVGDVPW+
Sbjct: 185 LNSSEYVPSYEDKDGDWMLVGDVPWE 210
>AT4G28640.3 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143677 FORWARD LENGTH=250
Length = 250
Score = 119 bits (299), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 84/165 (50%), Gaps = 36/165 (21%)
Query: 61 DSAPPAKAQVVGWPPVRSFRKNSMQQKKGEGA------------------------GMYV 96
DS QVVGWPP+R++R NSM + A M+V
Sbjct: 80 DSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFV 139
Query: 97 KVSMAGAPYLRKIDLKVYKSYPELLKALENMF-KCTFGEYS-EREGY----------NGS 144
KV+M G P RKIDL +K Y L LE MF K G + E +G+ S
Sbjct: 140 KVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSS 199
Query: 145 EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLGYF 189
V TYEDK+GDWMLVGDVPW MF+ S +RLRIMK SEA G G F
Sbjct: 200 GLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKGTF 244
>AT1G80390.1 | Symbols: IAA15 | indole-3-acetic acid inducible 15 |
chr1:30221780-30222702 REVERSE LENGTH=179
Length = 179
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 95/180 (52%), Gaps = 17/180 (9%)
Query: 9 NLKATELRLGLPGR--DELENAVVRCNKRSSPEAXXXXXXXXXXXXXXITSDDKDSAPPA 66
+L TEL L LPG + E NKR E ++ S+
Sbjct: 15 DLGGTELTLALPGTPTNASEGPKKFGNKRRFLETVDLKLGEAH-------ENNYISSMVT 67
Query: 67 KAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALEN 126
Q+VGWPPV + RK ++ YVKV++ GA YLRK+DL +Y Y +L ALEN
Sbjct: 68 NDQLVGWPPVATARKTVRRK--------YVKVALDGAAYLRKVDLGMYDCYGQLFTALEN 119
Query: 127 MFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
MF+ E E+V TYEDKDGD MLVGDVPW MF+ SCKR+R+MK +A GL
Sbjct: 120 MFQGIITICRVTELERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
>AT4G28640.1 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143755 FORWARD LENGTH=246
Length = 246
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 82/161 (50%), Gaps = 36/161 (22%)
Query: 61 DSAPPAKAQVVGWPPVRSFRKNSMQQKKGEGA------------------------GMYV 96
DS QVVGWPP+R++R NSM + A M+V
Sbjct: 80 DSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFV 139
Query: 97 KVSMAGAPYLRKIDLKVYKSYPELLKALENMF-KCTFGEYS-EREGY----------NGS 144
KV+M G P RKIDL +K Y L LE MF K G + E +G+ S
Sbjct: 140 KVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSS 199
Query: 145 EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKG 185
V TYEDK+GDWMLVGDVPW MF+ S +RLRIMK SEA G
Sbjct: 200 GLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATG 240
>AT2G33310.3 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 87/164 (53%), Gaps = 38/164 (23%)
Query: 62 SAPPAKAQVVGWPPVRSFRKNSMQQKKG-------EGAGM-------------------- 94
S+PP +QVVGWPP+ S R NS+ + E AG
Sbjct: 68 SSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQ 127
Query: 95 --YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMF----KCTFGEYSE-----REGYNG 143
++KV+M G RK+DL + SY L + LE+MF T G S+ R
Sbjct: 128 VGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGS 187
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
SE+V TYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GL
Sbjct: 188 SEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT2G33310.1 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=246
Length = 246
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 87/164 (53%), Gaps = 38/164 (23%)
Query: 62 SAPPAKAQVVGWPPVRSFRKNSMQQKKG-------EGAGM-------------------- 94
S+PP +QVVGWPP+ S R NS+ + E AG
Sbjct: 68 SSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQ 127
Query: 95 --YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMF----KCTFGEYSE-----REGYNG 143
++KV+M G RK+DL + SY L + LE+MF T G S+ R
Sbjct: 128 VGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGS 187
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
SE+V TYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GL
Sbjct: 188 SEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231
>AT4G28640.2 | Symbols: IAA11 | indole-3-acetic acid inducible 11 |
chr4:14142288-14143928 FORWARD LENGTH=302
Length = 302
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 82/161 (50%), Gaps = 36/161 (22%)
Query: 61 DSAPPAKAQVVGWPPVRSFRKNSMQQKKGEGA------------------------GMYV 96
DS QVVGWPP+R++R NSM + A M+V
Sbjct: 80 DSMAATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFV 139
Query: 97 KVSMAGAPYLRKIDLKVYKSYPELLKALENMF-KCTFGEYS-EREGY----------NGS 144
KV+M G P RKIDL +K Y L LE MF K G + E +G+ S
Sbjct: 140 KVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSS 199
Query: 145 EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKG 185
V TYEDK+GDWMLVGDVPW MF+ S +RLRIMK SEA G
Sbjct: 200 GLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATG 240
>AT2G33310.2 | Symbols: IAA13 | auxin-induced protein 13 |
chr2:14114569-14115757 REVERSE LENGTH=247
Length = 247
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 88/165 (53%), Gaps = 39/165 (23%)
Query: 62 SAPP-AKAQVVGWPPVRSFRKNSMQQKKG-------EGAGM------------------- 94
S+PP + +QVVGWPP+ S R NS+ + E AG
Sbjct: 68 SSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKV 127
Query: 95 ---YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMF----KCTFGEYSE-----REGYN 142
++KV+M G RK+DL + SY L + LE+MF T G S+ R
Sbjct: 128 QVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDG 187
Query: 143 GSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
SE+V TYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GL
Sbjct: 188 SSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
>AT1G04550.2 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241810 FORWARD
LENGTH=239
Length = 239
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 85/168 (50%), Gaps = 37/168 (22%)
Query: 56 TSDDKDSAPPAKAQVVGWPPVRSFRKNSMQQKKG-------EGAGM-------------- 94
+S + ++PP +QVVGWPP+ R NS+ + EG G
Sbjct: 56 SSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSM 115
Query: 95 ----------YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSE------R 138
+VKV+M G RK+D++ + SY L + LE MF G R
Sbjct: 116 KVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLR 175
Query: 139 EGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
S++V TYEDK+GDWMLVGDVPW MF++S KRLRIM SEA GL
Sbjct: 176 LLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGL 223
>AT3G16500.1 | Symbols: PAP1, IAA26 | phytochrome-associated protein
1 | chr3:5612801-5614208 REVERSE LENGTH=269
Length = 269
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 55/222 (24%)
Query: 11 KATELRLGLPGRDELENAVVRCNKRSSPEAXXXXXXXXXXXXXXITSD-----DKDSAPP 65
K ELRLG PG DE +++ + K+ + E + +K ++ P
Sbjct: 36 KKLELRLGPPGGDEEDHSAI---KKKNTEIRNIKKETEDKSFHCFNGNHFSPSNKTTSVP 92
Query: 66 AKAQ-------VVGWPPVRSFRKN------------------------SMQQKKGEGAGM 94
+Q VVGWPPVRSFRKN +Q + + GM
Sbjct: 93 HISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGM 152
Query: 95 YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGS---------- 144
+VK++M G P RK+DL Y SY +L ++ +F+ ++R+ +G
Sbjct: 153 FVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLA--AQRDISDGQGEEKPIIGLL 210
Query: 145 ----EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSE 182
E+ TYED +GD MLVGDVPW MF+SS KRLR++K SE
Sbjct: 211 DGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
>AT1G51950.1 | Symbols: IAA18 | indole-3-acetic acid inducible 18 |
chr1:19305670-19307130 FORWARD LENGTH=267
Length = 267
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 103/215 (47%), Gaps = 47/215 (21%)
Query: 11 KATELRLGLPGRDELENAVVRCNKRSSPEAXXXXXXXXXXXXXXI-TSDDKDSAPPAKAQ 69
K EL+LG PG ++ + +++R K+ + T+ K +AP
Sbjct: 40 KKLELKLGPPGEEDDDESMIRHMKKEPKDKSILSLAGKYFSPSSTKTTSHKRTAP---GP 96
Query: 70 VVGWPPVRSFRKN-------------------SMQQKKGEGA----------GMYVKVSM 100
VVGWPPVRSFRKN +++ +K + A GM+VK++M
Sbjct: 97 VVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINM 156
Query: 101 AGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGY-------------NGSEYV 147
G P RK+DL + SY +L ++ +F+ + NG EY
Sbjct: 157 YGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNG-EYT 215
Query: 148 PTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSE 182
TYED +GD MLVGDVPW MF+SS KRLR++K SE
Sbjct: 216 LTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
>AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible
28 | chr5:9033480-9034554 FORWARD LENGTH=175
Length = 175
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 16/129 (12%)
Query: 68 AQVVGWPPVRSFRKNSMQQ--------KKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPE 119
A VVGWPPVRS R+N Q + E +YVK++M G P RK++L Y +Y +
Sbjct: 47 APVVGWPPVRSSRRNLTAQLKEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQ 106
Query: 120 LLKALENMFKCTFGEYSEREGYN-GSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIM 178
L A++ +F S+++ ++ +Y YED +GD +LVGDVPW+MF+S+ KRL ++
Sbjct: 107 LSHAVDQLF-------SKKDSWDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVL 159
Query: 179 KGSEAKGLG 187
K S A L
Sbjct: 160 KTSHAFSLS 168
>AT3G17600.1 | Symbols: IAA31 | indole-3-acetic acid inducible 31 |
chr3:6020281-6021040 REVERSE LENGTH=158
Length = 158
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 8/122 (6%)
Query: 62 SAPPAKAQVVGWPPVRSFRKNSMQ----QKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSY 117
S P + WPP++S +++++ ++G+ ++VKV M G P RK+DL V+ Y
Sbjct: 37 STSPQREARQDWPPIKSRLRDTLKGRRLLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGY 96
Query: 118 PELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRI 177
LL+ L +MF + + + +V TYEDKDGDWM+VGD+PWDMF+ + +RL+I
Sbjct: 97 ESLLENLSHMFDTSIICGNR----DRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKI 152
Query: 178 MK 179
+
Sbjct: 153 TR 154
>AT1G04100.1 | Symbols: IAA10 | indoleacetic acid-induced protein 10
| chr1:1059809-1061026 FORWARD LENGTH=261
Length = 261
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 74/166 (44%), Gaps = 49/166 (29%)
Query: 71 VGWPPVRSFRKNSMQQK----------------------------------KGEGAGMYV 96
VGWPP+R++R NS+ + K M V
Sbjct: 95 VGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLV 154
Query: 97 KVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFG--EYSEREGY------------- 141
KV+M G RK+DL SY L K L+ MF S +GY
Sbjct: 155 KVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLLD 214
Query: 142 NGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
SEY+ TY+DKDGDWMLVGDVPW MF+ S RLRIMK S G+G
Sbjct: 215 GSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGVG 260
>AT2G46990.1 | Symbols: IAA20 | indole-3-acetic acid inducible 20 |
chr2:19307861-19308869 FORWARD LENGTH=175
Length = 175
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%)
Query: 94 MYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDK 153
YVKV+M G P RKIDL Y +L++ L+ MF + E + N +V TY DK
Sbjct: 85 FYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADK 144
Query: 154 DGDWMLVGDVPWDMFMSSCKRLRIMKGS 181
+GDWM+VGDVPW+MF+S+ +RL+I + +
Sbjct: 145 EGDWMMVGDVPWEMFLSTVRRLKISRAN 172
>AT3G62100.1 | Symbols: IAA30 | indole-3-acetic acid inducible 30 |
chr3:22995835-22996593 FORWARD LENGTH=172
Length = 172
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%)
Query: 94 MYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDK 153
YVKV+M G P RKIDL Y +L+ L+ MF + E + + +V TY DK
Sbjct: 83 FYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYADK 142
Query: 154 DGDWMLVGDVPWDMFMSSCKRLRIMK 179
+GDWM+VGDVPW+MF+SS +RL+I +
Sbjct: 143 EGDWMMVGDVPWEMFLSSVRRLKISR 168
>AT4G32280.1 | Symbols: IAA29 | indole-3-acetic acid inducible 29 |
chr4:15583479-15584628 FORWARD LENGTH=251
Length = 251
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 94 MYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDK 153
MYVKV M G RK+D+K++ SY L +L MF T E +RE N Y T++ K
Sbjct: 160 MYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMF--TEYEDCDREDTN---YTFTFQGK 214
Query: 154 DGDWMLVGDVPWDMFMSSCKRLRIMK 179
+GDW+L GDV W +F S R+ I++
Sbjct: 215 EGDWLLRGDVTWKIFAESVHRISIIR 240
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 85 QQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGS 144
+QK+ +KV M G R +DL + +SY EL+K LE MF+ GE S ++
Sbjct: 395 EQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIE-GELSPKD----- 448
Query: 145 EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
++ + D +GD MLVGD PW+ F K+L I E K +
Sbjct: 449 KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 490
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 63.5 bits (153), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 85 QQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGS 144
+QK+ +KV M G R +DL + +SY EL+K LE MF+ GE S ++
Sbjct: 503 EQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIE-GELSPKD----- 556
Query: 145 EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
++ + D +GD MLVGD PW+ F K+L I E K +
Sbjct: 557 KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 598
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 85 QQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGS 144
+QK+ +KV M G R +DL + +SY EL+K LE MF+ GE S ++
Sbjct: 482 EQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIE-GELSPKD----- 535
Query: 145 EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
++ + D +GD MLVGD PW+ F K+L I E K +
Sbjct: 536 KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 577
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 85 QQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGS 144
+QKK + + KV M G R +DL + KSY EL+ LE MF+ G+ R+
Sbjct: 481 EQKKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ-GQLLARD----- 534
Query: 145 EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
+++ + D +GD ML GD PW+ F K++ I E K +
Sbjct: 535 KWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKM 576
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 84 MQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNG 143
+Q K+ KV M G P R +DL K Y EL+ +E +F GE R N
Sbjct: 514 VQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIK-GELRSR---NQ 569
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
E V + D +GD MLVGD PW F + KR+ I E K +
Sbjct: 570 WEIV--FTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 610
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 84 MQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNG 143
+Q K+ KV M G P R +DL K Y EL+ +E +F GE R N
Sbjct: 512 VQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIK-GELRSR---NQ 567
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
E V + D +GD MLVGD PW F + KR+ I E K +
Sbjct: 568 WEIV--FTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 608
>AT1G15050.1 | Symbols: IAA34 | indole-3-acetic acid inducible 34 |
chr1:5182256-5183243 REVERSE LENGTH=185
Length = 185
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 95 YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKD 154
YVKV+M G RK+ + + SY L LE+MF R SE+ Y D++
Sbjct: 94 YVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQ-SVSGLRLFQMESEFCLVYRDEE 152
Query: 155 GDWMLVGDVPWDMFMSSCKRLRIMKGSEA 183
G W GDVPW+ F+ S +RLRI + ++A
Sbjct: 153 GLWRNAGDVPWNEFIESVERLRITRRNDA 181
>AT1G04550.1 | Symbols: IAA12, BDL | AUX/IAA transcriptional
regulator family protein | chr1:1240582-1241375 FORWARD
LENGTH=173
Length = 173
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 31/111 (27%)
Query: 56 TSDDKDSAPPAKAQVVGWPPVRSFRKNSMQQKKG-------EGAGM-------------- 94
+S + ++PP +QVVGWPP+ R NS+ + EG G
Sbjct: 56 SSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSM 115
Query: 95 ----------YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEY 135
+VKV+M G RK+D++ + SY L + LE MF G Y
Sbjct: 116 KVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGLY 166
>AT2G01200.2 | Symbols: IAA32 | indole-3-acetic acid inducible 32 |
chr2:118385-119219 FORWARD LENGTH=191
Length = 191
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 88 KGEGAG--MYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSE 145
+GE G YVKV++ G RK+ L +Y L L +MF R SE
Sbjct: 91 EGESRGKYAYVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQTVS-GLRLFQTESE 149
Query: 146 YVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEA 183
+ Y D++G W VGDVPW F+ S R+RI + ++A
Sbjct: 150 FSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDA 187
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 83 SMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYN 142
S Q+ + KV M G+ R IDL + Y +L K LE MF GE E +
Sbjct: 527 SPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIK-GELLE----S 581
Query: 143 GSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
++ Y D + D M+VGD PW+ F +++ I E K L
Sbjct: 582 TKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 625
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 83 SMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYN 142
S Q+ + KV M G+ R IDL + Y +L K LE MF GE E +
Sbjct: 529 SPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIK-GELLE----S 583
Query: 143 GSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
++ Y D + D M+VGD PW+ F +++ I E K L
Sbjct: 584 TKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 627
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 83 SMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYN 142
S Q+ + KV M G+ R IDL + Y +L K LE MF GE E +
Sbjct: 532 SPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIK-GELLE----S 586
Query: 143 GSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
++ Y D + D M+VGD PW+ F +++ I E K L
Sbjct: 587 TKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 83 SMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYN 142
S Q+ + KV M G+ R IDL + Y +L K LE MF GE E +
Sbjct: 532 SPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIK-GELLE----S 586
Query: 143 GSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
++ Y D + D M+VGD PW+ F +++ I E K L
Sbjct: 587 TKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 84 MQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNG 143
+Q K+ KV M G R +DL V Y +L+ LE +F G+ R
Sbjct: 500 IQSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLK-GQLQTR----- 553
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMK 179
+++ + D D D MLVGD PW F + K++ I K
Sbjct: 554 NQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIFK 589
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 84 MQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNG 143
+Q K+ + KV M G R +DL V Y +L+ LE +F G+ R
Sbjct: 502 IQSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIK-GQLQTR----- 555
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAK 184
+++ + D DG MLVGD PW F K++ I E K
Sbjct: 556 NQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 84 MQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNG 143
+Q K+ + KV M G R +DL V Y +L+ LE +F G+ R
Sbjct: 502 IQNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIK-GQLQTR----- 555
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMK 179
+++ + D D D MLVGD PW F + K++ I K
Sbjct: 556 NQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFIQK 591
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 84 MQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNG 143
+Q K+ KV M G R +DL V Y +L+ LE +F G+ R
Sbjct: 486 IQSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLK-GQLQTR----- 539
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAK 184
+++ + D DG MLVGD PW F K++ I E K
Sbjct: 540 NQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 95 YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKD 154
Y KV G+ R ID+ Y+ Y EL L MF G + E S++ Y D +
Sbjct: 1040 YTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMF----GIEGQLEDPQTSDWKLVYVDHE 1094
Query: 155 GDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
D +LVGD PW+ F++ + ++I+ +E + +
Sbjct: 1095 NDILLVGDDPWEEFVNCVQSIKILSSAEVQQM 1126
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 95 YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKD 154
Y KV G+ R ID+ Y+ Y EL L MF G + E S++ Y D +
Sbjct: 1040 YTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMF----GIEGQLEDPQTSDWKLVYVDHE 1094
Query: 155 GDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
D +LVGD PW+ F++ + ++I+ +E + +
Sbjct: 1095 NDILLVGDDPWEEFVNCVQSIKILSSAEVQQM 1126
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 95 YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKD 154
Y KV G+ R ID+ Y+ Y EL L MF G + E S++ Y D +
Sbjct: 1039 YTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMF----GIEGQLEDPQTSDWKLVYVDHE 1093
Query: 155 GDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
D +LVGD PW+ F++ + ++I+ +E + +
Sbjct: 1094 NDILLVGDDPWEEFVNCVQSIKILSSAEVQQM 1125
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 84 MQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNG 143
+Q K+ KV M G R +DL V Y +L+ LE +F G+ R
Sbjct: 507 IQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLK-GQLQTR----- 560
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMK 179
+++ + D D MLVGD PW F + KR+ I K
Sbjct: 561 NQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYIQK 596
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 46.6 bits (109), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 95 YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKD 154
Y KV G+ R ID+ +K Y EL A+E C FG S + Y D +
Sbjct: 795 YTKVQKTGS-VGRSIDVTSFKDYEELKSAIE----CMFGLEGLLTHPQSSGWKLVYVDYE 849
Query: 155 GDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
D +LVGD PW+ F+ + +RI+ +E + +
Sbjct: 850 SDVLLVGDDPWEEFVGCVRCIRILSPTEVQQM 881