Miyakogusa Predicted Gene
- Lj0g3v0086789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0086789.1 Non Chatacterized Hit- tr|D5A823|D5A823_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,26.42,0.000000000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PPR,Pentatricopeptide repeat; PPR:
pentatricopeptid,CUFF.4616.1
(308 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 2e-58
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 67 1e-11
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 3e-08
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 56 4e-08
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 55 7e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 54 9e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 54 2e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 53 2e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-07
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 8e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 51 9e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 3e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 49 4e-06
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 8e-06
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 176/294 (59%), Gaps = 29/294 (9%)
Query: 34 PDHPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDV 93
P + +D+L EAG+SGD +R +LN R G FNT TF F+T T S+ ++D+
Sbjct: 34 PGRRKTTEFDKLINEAGSSGDFETVRRLLNNRIVLGSFNTSDTFKFLTNTASYSSYLEDL 93
Query: 94 VRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVV----------------------- 130
R L ++ GF+RK+A++ L++RLCKL R DDAL V+
Sbjct: 94 RRVLPQIDGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLT 153
Query: 131 ------ESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPR 184
E+ V M + +D+TA+N FL S+C+ G+LE+A+ V+++IE +G + D R
Sbjct: 154 RKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSR 213
Query: 185 TFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSF 244
++DALVLGAC+AG V+ A+A++RRM EDGV +LYSTH VIT L+ Y ++ ++
Sbjct: 214 SYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMAY 273
Query: 245 GGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLPMGQKLKAFYLKNA 298
GKD LD++ G L KL+ K+ +EAM+++ EM +GL MG +L+ FY N
Sbjct: 274 AGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLRMGDELRQFYEGNV 327
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 177/296 (59%), Gaps = 32/296 (10%)
Query: 34 PDHPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDV 93
P T +D L +AG+SGD A+R +LN R + CFNT TF F+T T+ S+ ++D+
Sbjct: 52 PGRRTCVEFDNLIFKAGSSGDFEAVRRLLNSRVVNACFNTTATFKFLTNTDSYSSSLEDL 111
Query: 94 VRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAV------------------ 135
R L + G+TRK ++E+L+ RLCKL R DDAL ++ MA+
Sbjct: 112 RRILPQTDAGYTRKHSYETLIARLCKLGRIDDALVLINDMAIGEFGLSTCVFHPILNTLT 171
Query: 136 -EGR----------MAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEG---LAA 181
+ R M + +D+T++N FL S+C+ GD+ A+ VL+++E E ++
Sbjct: 172 KKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSP 231
Query: 182 DPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYA 241
D RT+DALVLGACK+G V+ A+A++RRM E+G+ +LY+TH VI ++ Y + ++
Sbjct: 232 DTRTYDALVLGACKSGRVEAAMAILRRMEEEGLSVLYATHAHVIGEMVESGYYALSVEFV 291
Query: 242 RSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLPMGQKLKAFYLKN 297
++ GKD LD + LG L SKL+ K+ KEA ++L EM+ +GL MG L+ F+ KN
Sbjct: 292 MAYAGKDKRLDEENLGSLASKLIKRKRFKEAKMVLKEMSVRGLRMGDALREFHEKN 347
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P A Y+E+ + G SG + ++ IL C TF + + L D+++
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 97 LSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLM 156
+ + F K R+ L ++L++VE +M+ +G++ D++ N+ +
Sbjct: 141 VDWMIDEFGLKPD-THFYNRMLNLLVDGNSLKLVE--ISHAKMSVWGIKPDVSTFNVLIK 197
Query: 157 SYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPM 216
+ C + L A +L+ + + GL D +TF ++ G + G +DGA+ + +MVE G
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 217 LYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTL-DTQLLGCLGSKLMMLKKVKEAMLI 275
+ ++ + + A + + +D D L + L VK A+ I
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 276 LDEMNQKG 283
+D M Q+G
Sbjct: 318 MDVMLQEG 325
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 103 GFTRKSA-FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFS 161
G +R S + +L+ LCK R +DA Q+++ M +EG+ + D +N L +C
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ------KPDKYTYNSLLTHFCRG 553
Query: 162 GDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTH 221
GD++ AA +++ + + G D T+ L+ G CKAG V+ A ++R + G+ + +
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 222 MCVITTLLR 230
VI L R
Sbjct: 614 NPVIQGLFR 622
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 5/171 (2%)
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
+V CK R +DAL ++ M+ + G D N + C +G ++ A ++
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQD-----GFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 173 RIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMN 232
+ EG D T+++++ G CK G V A+ V+ +M+ T+ +I+TL + N
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 233 CYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG 283
++A + AR K D L L + + + AM + +EM KG
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 60 DILNKRFQDGCFNTKHTFSFITATNLTS-------TLIDDVVRTLSGLNPGFTRKSAFES 112
D+ K D CF T T++ + + S L+ ++ T G+ P +
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET--GIKPNIHTYTVLID 366
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
+ CK E+A + L G+M GL ++ +N + YC G +E A V++
Sbjct: 367 SLCSQCKFEKARELL---------GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 173 RIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMN 232
+E+ L+ + RT++ L+ G CK+ V A+ V+ +M+E V T+ +I R
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 233 CYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ A + + D + L K+V+EA + D + QKG+
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P + Y+EL ++ +++ +LNK + T++ + S D R
Sbjct: 426 PNTRTYNEL-IKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 97 LS-----GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
LS GL P + + S++ LCK +R ++A + +S+ +G + ++ +
Sbjct: 485 LSLMNDRGLVPD---QWTYTSMIDSLCKSKRVEEACDLFDSLEQKG------VNPNVVMY 535
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
+ YC +G ++ A +L+++ ++ + TF+AL+ G C G + A + +MV+
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 212 DGVPMLYSTHMCVITTLLR 230
G+ ST +I LL+
Sbjct: 596 IGLQPTVSTDTILIHRLLK 614
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ LV CKL + D+A V+ M+ +G L+ + N + ++C + A
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADG------LKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+ + + +G D TF++L+ G C+ + A+ ++R M+ +GV T+ +I
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG 283
LR K+ARK + + LD L L +V +A + ++M + G
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 5/175 (2%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F +L+ R DDA V+ M + +G+ D+ +N + Y G + A
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDM-----VTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
VL + N+G + ++ LV G CK G +D A V+ M DG+ C+I+
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ + +A + R K D L S L + ++K A+ +L +M +G+
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
L+ LC+ ++A++ + M + G D+ N + C +G +E + +
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTP------DIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 173 RIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMN 232
+++ EG+ D TF+ L+ CK G V A ++ +EDG + T ++ +++
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
Query: 233 CYKQARKYARSF 244
+ R Y +F
Sbjct: 719 TLDRRRFYNAAF 730
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ SL+ LC+ D A + E M +G + N+ + C SG +E A
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN------ISCNILINGLCRSGMVEEAVE 620
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVP 215
K + G D TF++L+ G C+AG ++ + + R++ +G+P
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 14/239 (5%)
Query: 51 TSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRTL-----SGLNPGFT 105
+SGDL+ +I+ + GC ++ + T L ++ D +R L G+ P
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 106 RKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLE 165
+ SL+ L K +R D+A S VE M GL+ + + F+ Y + +
Sbjct: 489 ---CYNSLIIGLSKAKRMDEA----RSFLVE--MVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 166 AAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVI 225
+A +K + G+ + L+ CK G V A + R MV+ G+ T+ ++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 226 TTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
L + + A + R GK D G L + L +++A I DEM ++GL
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 14/263 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P Y L GDL++ ++L++ ++ G T++ I S I++ V+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 97 L-----SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
+ +GLN + +L+ CK D A ++++ M G GL+ +
Sbjct: 514 VGEFEAAGLNAD---TVTYTTLMDAYCKSGEMDKAQEILKEML------GKGLQPTIVTF 564
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
N+ + +C G LE +L + +G+A + TF++LV C + A A+ + M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 212 DGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKE 271
GV T+ ++ + K+A + GK ++ L + KK E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 272 AMLILDEMNQKGLPMGQKLKAFY 294
A + D+M ++GL +++ F+
Sbjct: 685 AREVFDQMRREGLAADKEIFDFF 707
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 14/263 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P Y L GDL++ ++L++ ++ G T++ I S I++ V+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 97 L-----SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
+ +GLN + +L+ CK D A ++++ M G GL+ +
Sbjct: 514 VGEFEAAGLNAD---TVTYTTLMDAYCKSGEMDKAQEILKEML------GKGLQPTIVTF 564
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
N+ + +C G LE +L + +G+A + TF++LV C + A A+ + M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 212 DGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKE 271
GV T+ ++ + K+A + GK ++ L + KK E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 272 AMLILDEMNQKGLPMGQKLKAFY 294
A + D+M ++GL +++ F+
Sbjct: 685 AREVFDQMRREGLAADKEIFDFF 707
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 9/176 (5%)
Query: 112 SLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVL 171
SL+ C+ R DA+ +V +M G R D+ +N + C G + A +
Sbjct: 144 SLINGFCQGNRVFDAIDLV------SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 172 KRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMV-EDGVPMLYSTHMCVITTLLR 230
R+E +G+ AD T+++LV G C +G A ++R MV D VP + T VI ++
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI-TFTAVIDVFVK 256
Query: 231 MNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG-LP 285
+ +A K + D L + L M +V EA +LD M KG LP
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ ++ LC+ R AL VV G+M FG D+ + + +C + A
Sbjct: 106 SYNIVINCLCRCSRFVIALSVV------GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
++ ++E G D ++ ++ G+CK G+V+ A+ + RM DGV T+ ++ L
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQK 282
+ A + R +D + + + K EAM + +EM ++
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 9/186 (4%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
G +PG + S++ +LC+ R +A +++ M+G + D N + +Y
Sbjct: 337 GFSPGVV---TYNSILRKLCEDGRIREANRLL------TEMSGKKIEPDNITCNTLINAY 387
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLY 218
C D+ +A V K++ GL D ++ AL+ G CK ++ A + M+E G Y
Sbjct: 388 CKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGY 447
Query: 219 STHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDE 278
+T+ ++ N + K F + D L L ++ L++V A ++ +
Sbjct: 448 ATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFES 507
Query: 279 MNQKGL 284
M +KGL
Sbjct: 508 MEKKGL 513
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 24/193 (12%)
Query: 47 VEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRTLSGLNPG-FT 105
VE G S ++ + ++N G + FSF+T + + TLS L G F
Sbjct: 273 VEKGISPNVISYSTLINVLCNSG--QIELAFSFLT--QMLKRGCHPNIYTLSSLVKGCFL 328
Query: 106 RKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLE 165
R + F DAL + M + GFGL+ ++ A+N + +C G++
Sbjct: 329 RGTTF--------------DALDLWNQM-----IRGFGLQPNVVAYNTLVQGFCSHGNIV 369
Query: 166 AAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVI 225
A V +E G + + RT+ +L+ G K G +DGA+ + +M+ G + ++
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 226 TTLLRMNCYKQAR 238
L R + +K+A
Sbjct: 430 EALCRHSKFKEAE 442
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 35/188 (18%)
Query: 128 QVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFD 187
Q+ +++ V M G+R + T N + YC SG L A + R+ + L D T++
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYN 405
Query: 188 ALVLGACKAGVVDGAIAVVRRMVE-DGVPMLYSTHM------------------------ 222
LV G C+AG VD A+ + +M + + VP + + ++
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR 465
Query: 223 ----------CVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEA 272
++ L ++ + +A K + + DT L + S L ++KV EA
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525
Query: 273 MLILDEMN 280
ILD +N
Sbjct: 526 KEILDNVN 533
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 23/243 (9%)
Query: 67 QDGCFNTKHTFSFITATNLTSTL--IDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERAD 124
+DG ++ H ++ I +S L I V T L P ++ +E ++ LC+ +
Sbjct: 89 EDGDWSKDHFWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISENNYERIIRFLCEEKSMS 148
Query: 125 DALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPR 184
+A++ SM + ++ L +N + SY G E A L ++ GL
Sbjct: 149 EAIRAFRSMIDDHELSP-----SLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITE 203
Query: 185 TFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSF 244
T+D L+ K + D + ++RM DG + T+ +I R K+ + +S
Sbjct: 204 TYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSL 263
Query: 245 GGKDTTLDTQLLGCLGSKLMMLKKVKEAMLI--LDEMNQKGLPMG--------QKLKAFY 294
+ TL+ L L ML+ E LI ++E K + G +KL Y
Sbjct: 264 MSRKMTLEPSTL------LSMLEAYAEFGLIEKMEETCNKIIRFGISLDEGLVRKLANVY 317
Query: 295 LKN 297
++N
Sbjct: 318 IEN 320
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 89/212 (41%), Gaps = 39/212 (18%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P + Y+ + + G L+ +LN+ D C T T++ + + +D+ ++
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 97 LS-----GLNPG-FTRKSAFESLVTRLCKLERADDALQVVESMAVEG------------- 137
+ GL P FT + +++ +CK D A ++V ++ ++G
Sbjct: 251 MDEMLSRGLKPDMFT----YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLR 306
Query: 138 ----------------RMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAA 181
+M ++ +++ + + C G +E A +LK ++ +GL
Sbjct: 307 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Query: 182 DPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
D ++D L+ C+ G +D AI + M+ DG
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 41/211 (19%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
A+ +L+ CK+ R DDA +V++ RM D +N+ + S C G L+ A
Sbjct: 160 AYNALINGFCKMNRIDDATRVLD------RMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 169 GVLKRIENE-----------------------------------GLAADPRTFDALVLGA 193
VL ++ ++ GL D T++ ++ G
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 194 CKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDT 253
CK G+VD A +VR + G ++ ++ LL +++ K + +
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 254 QLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
L + L K++EAM +L M +KGL
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 69 GCFNTKHTFSFITATNLTSTLIDDVVRTL-----SGLNPGFTRKSAFESLVTRLCKLERA 123
G F TF+ + T +++ + L +G++P + SL+ LCK +
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV---YTYNSLLNGLCKTSKF 512
Query: 124 DDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADP 183
+D ++ ++M +G +L N+ L S C L+ A G+L+ ++N+ + D
Sbjct: 513 EDVMETYKTMVEKGCAP------NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 184 RTFDALVLGACKAGVVDGAIAVVRRMVE 211
TF L+ G CK G +DGA + R+M E
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F SL+ CK R D AL++ M L+LDL A+ + +C D++ A
Sbjct: 628 FTSLINGFCKSNRMDLALEMTH------EMKSMELKLDLPAYGALIDGFCKKNDMKTAYT 681
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ + GL + +++L+ G G +D AI + ++MV DG+ T+ +I LL
Sbjct: 682 LFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLL 741
Query: 230 R 230
+
Sbjct: 742 K 742
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 92 DVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
D++R + G + + S++ K ++A++V++ M GFG+ + + A
Sbjct: 295 DLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD------EMVGFGIPMSVIAA 348
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRM 209
+ YC +L A + R+E EGLA D F +V CK ++ AI RM
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM 406
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 11/191 (5%)
Query: 89 LIDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDL 148
L D +V GL P F +L+ LC R V+E+ A+ +M G GL +D+
Sbjct: 213 LFDQMVEI--GLTPVVI---TFNTLINGLCLEGR------VLEAAALVNKMVGKGLHIDV 261
Query: 149 TAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRR 208
+ + C GD ++A +L ++E + D + A++ CK G A +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 209 MVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKK 268
M+E G+ T+ C+I + A++ R ++ D L S + K
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 269 VKEAMLILDEM 279
+ EA + DEM
Sbjct: 382 LFEAEKLCDEM 392
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 11/191 (5%)
Query: 89 LIDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDL 148
L D +V GL P F +L+ LC R V+E+ A+ +M G GL +D+
Sbjct: 213 LFDQMVEI--GLTPVVI---TFNTLINGLCLEGR------VLEAAALVNKMVGKGLHIDV 261
Query: 149 TAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRR 208
+ + C GD ++A +L ++E + D + A++ CK G A +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 209 MVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKK 268
M+E G+ T+ C+I + A++ R ++ D L S + K
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 269 VKEAMLILDEM 279
+ EA + DEM
Sbjct: 382 LFEAEKLCDEM 392
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 7/200 (3%)
Query: 107 KSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEA 166
K+ ++ + L + R D+A ++ ++M R AG+ D ++ + C + LE
Sbjct: 370 KAVYDGIHRSLTSVGRFDEAEEITKAM----RNAGY--EPDNITYSQLVFGLCKAKRLEE 423
Query: 167 AAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVIT 226
A GVL ++E +G D +T+ L+ G CK +D A+A M+E G + + +I
Sbjct: 424 ARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLID 483
Query: 227 TLLRMNCYKQARKYARSFGGKDTTLDTQ-LLGCLGSKLMMLKKVKEAMLILDEMNQKGLP 285
+ N ++ A + Q L KL+ +KK +EA+ +L M ++ P
Sbjct: 484 GFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP 543
Query: 286 MGQKLKAFYLKNAGTVNGVK 305
+ YL GT+ K
Sbjct: 544 AYAEAFDGYLAKFGTLEDAK 563
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ +++ K R D+AL + G M G+ LD ++N L Y G E A
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLF------GEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+L+ + + G+ D T++AL+ G K G D V M + V T+ +I
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ YK+A + R F D L L L V A+ ++DEM ++G+
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
L+ LCK R D+AL+V E M + G ++ D N + C G L+ A +L
Sbjct: 335 LINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 173 RIE-NEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
R++ E A + T++ L+ G C+AG ++ A VV RM ED +
Sbjct: 395 RMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 86/177 (48%), Gaps = 5/177 (2%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F +L+ LCK+ R +A +++ M +E R A + +N + YC +G LE A
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAP-----NAVTYNCLIDGYCRAGKLETAKE 427
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
V+ R++ + + + T + +V G C+ ++ A+ M ++GV T+M +I
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLPM 286
++ ++A + + D ++ L S L +++ +A+ +++++ + G +
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +L++ LC++ R DA++VVE + EG G LDL A+NM + +C + E
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLK-EG-----GFSLDLLAYNMLIGLFCDKNNTEKVYE 567
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+L +E EG D T++ L+ K + ++ +M EDG+ +T+ VI
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 230 RMNCYKQARKYARSFG 245
+ +A K + G
Sbjct: 628 SVGELDEALKLFKDMG 643
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 9/187 (4%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
GL P + SL+ +CK + A++ ++ M V G L + + + +
Sbjct: 340 GLTPSVI---TYTSLIHSMCKAGNMNRAMEFLDQMRVRG------LCPNERTYTTLVDGF 390
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLY 218
G + A VL+ + + G + T++AL+ G C G ++ AIAV+ M E G+
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 219 STHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDE 278
++ V++ R +A + R K DT L ++ KEA + +E
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 279 MNQKGLP 285
M + GLP
Sbjct: 511 MLRVGLP 517
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P+ Y L +G++N + L++ G + T++ + +++ R
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 97 LSGLNP-GFTRKSA-FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMF 154
L +N GF+ + +L+ C + +DA+ V+E M +G L D+ +++
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG------LSPDVVSYSTV 456
Query: 155 LMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
L +C S D++ A V + + +G+ D T+ +L+ G C+ A + M+ G+
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 215 P 215
P
Sbjct: 517 P 517
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 82/204 (40%), Gaps = 29/204 (14%)
Query: 110 FESLVTRLCKLERADDALQVVESMAV-------------------EGRMAGF-------- 142
+ +L+ CKL + DD +++ SMA+ EGRM
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 143 --GLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVD 200
G LD +N + YC G+ A + + GL T+ +L+ CKAG ++
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 201 GAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLG 260
A+ + +M G+ T+ ++ + +A + R + L
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 261 SKLMMLKKVKEAMLILDEMNQKGL 284
+ + K+++A+ +L++M +KGL
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGL 446
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 41 YYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT-LSG 99
+Y+ + + +G +N +IL GC+ + +F+FI +++ L D++ + +S
Sbjct: 134 FYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSA 193
Query: 100 LNPGFTRKSA-FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
G + L+ LC+ + ALQ+++ + R ++ + + +
Sbjct: 194 PKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKS------RPNVMTFSPLIRGF 247
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLY 218
C G E A +L+R+E E + D TF+ L+ G K G V+ I ++ RM G
Sbjct: 248 CNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNP 307
Query: 219 STHMCVITTLL 229
T+ V+ LL
Sbjct: 308 GTYQEVLYGLL 318
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +L+ LCK ER D+A+ +++ M EG +N+ + C GDL
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEG------CSPSPVIYNVLIDGLCKKGDLTRVTK 278
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
++ + +G + T++ L+ G C G +D A++++ RMV T+ +I L+
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG 283
+ A + S + L+ + L S L K +EAM + +M +KG
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 106/251 (42%), Gaps = 10/251 (3%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P+ Y+ L GDL + +++ F GC + T++ + +D V
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 97 LSGL--NPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMF 154
L + + + +L+ L K RA DA++++ SM E R G L+ +++
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM--EER----GYHLNQHIYSVL 368
Query: 155 LMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG- 213
+ G E A + +++ +G + + LV G C+ G + A ++ RM+ G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
+P Y T+ ++ + ++A + + + + L L + +VKEAM
Sbjct: 429 LPNAY-TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 274 LILDEMNQKGL 284
++ +M G+
Sbjct: 488 MVWSKMLTIGI 498
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
L+ LCK R D+AL+V E M + G ++ D N + C G L+ A +L
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 173 RIE-NEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
R++ E + T++ L+ G C+AG ++ A VV RM ED +
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +L++ LC++ R DA++VVE + EG G LDL A+NM + +C + E
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLK-EG-----GFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+L +E EG D T++ L+ K + ++ +M EDG+ +T+ VI
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 230 RMNCYKQARKYARSFG 245
+ +A K + G
Sbjct: 628 SVGELDEALKLFKDMG 643
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F +L+ LCK+ R +A +++ M +E R + +N + YC +G LE A
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVP-----NAVTYNCLIDGYCRAGKLETAKE 427
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
V+ R++ + + + T + +V G C+ ++ A+ M ++GV T+M +I
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLPM 286
++ ++A + + D ++ L S L +++ +A+ +++++ + G +
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 89 LIDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDL 148
L D++V+ ++P + SL+ C +R D+A Q+ E M + D+
Sbjct: 348 LYDEMVK--RSIDPSIV---TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP------DV 396
Query: 149 TAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRR 208
+N + +C +E V + + GL + T++ L+ G +AG D A + +
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 209 MVEDGVP---MLYST 220
MV DGVP M Y+T
Sbjct: 457 MVSDGVPPNIMTYNT 471
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 9/185 (4%)
Query: 100 LNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYC 159
L PG + +++ LCK + DDAL + + M +G +R ++ ++ + C
Sbjct: 252 LEPGVL---IYNTIIDGLCKYKHMDDALNLFKEMETKG------IRPNVVTYSSLISCLC 302
Query: 160 FSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYS 219
G A+ +L + + D TF AL+ K G + A + MV+ +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 220 THMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEM 279
T+ +I + +A++ K D L K+V+E M + EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 280 NQKGL 284
+Q+GL
Sbjct: 423 SQRGL 427
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
L+ LCK R D+AL+V E M + G ++ D N + C G L+ A +L
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 173 RIE-NEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
R++ E + T++ L+ G C+AG ++ A VV RM ED +
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +L++ LC++ R DA++VVE + EG G LDL A+NM + +C + E
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLK-EG-----GFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+L +E EG D T++ L+ K + ++ +M EDG+ +T+ VI
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 230 RMNCYKQARKYARSFG 245
+ +A K + G
Sbjct: 628 SVGELDEALKLFKDMG 643
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F +L+ LCK+ R +A +++ M +E R + +N + YC +G LE A
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVP-----NAVTYNCLIDGYCRAGKLETAKE 427
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
V+ R++ + + + T + +V G C+ ++ A+ M ++GV T+M +I
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLPM 286
++ ++A + + D ++ L S L +++ +A+ +++++ + G +
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL 544
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 10/188 (5%)
Query: 42 YDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRTLSGLN 101
Y+ L G GD++ ++I T ++S + + + + R +
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 102 PGFTRKSAF--ESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYC 159
+ + S++ C+ A D +E M EG + D ++N + +
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP------DCISYNTLIYGFV 631
Query: 160 FSGDLEAAAGVLKRIENE--GLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPML 217
++ A G++K++E E GL D T+++++ G C+ + A V+R+M+E GV
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 218 YSTHMCVI 225
ST+ C+I
Sbjct: 692 RSTYTCMI 699
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ LV LC +A +V + M + ++ + N + YC SG+
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKN------IKPTVMICNSMIKGYCRSGNASDGE 605
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG---VPMLYSTHMCVI 225
L+++ +EG D +++ L+ G + + A +V++M E+ VP ++ T+ ++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF-TYNSIL 664
Query: 226 TTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLP 285
R N K+A R + D C+ + + + EA I DEM Q+G
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Query: 286 MGQKL 290
K
Sbjct: 725 PDDKF 729
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 104 FTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGD 163
F + S++ CK +R DDA ++++SMA +G D+ + + YC +
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG------CSPDVVTFSTLINGYCKAKR 60
Query: 164 LEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMC 223
++ + + G+ A+ T+ L+ G C+ G +D A ++ M+ GV Y T C
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 224 VITTL 228
++ L
Sbjct: 121 MLAGL 125
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 104 FTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGD 163
F + S++ CK +R DDA ++++SMA +G D+ + + YC +
Sbjct: 112 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG------CSPDVVTFSTLINGYCKAKR 165
Query: 164 LEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMC 223
++ + + G+ A+ T+ L+ G C+ G +D A ++ M+ GV Y T C
Sbjct: 166 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 224 VITTL 228
++ L
Sbjct: 226 MLAGL 230
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+F L+ +C ++ + E+M + ++ G + D +N + +C A
Sbjct: 232 SFTILIDNVC------NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
GV K+++ EG+ D T++ L+ G KAG V+ A ++ MV+ G Y T+L
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG----YEPDTATYTSL 341
Query: 229 LRMNCYKQ---------ARKYARSFGGKDTTLDTQLLGCLGSKLM 264
+ C K AR D T +T L G ++LM
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM 386
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 98 SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMS 157
+G++P + SL+ LCK R D AL++ + M +G ++LD+ A+ +
Sbjct: 613 NGISPNVI---TYTSLMNGLCKNNRMDQALEMRDEMKNKG------VKLDIPAYGALIDG 663
Query: 158 YCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPML 217
+C ++E+A+ + + EGL +++L+ G G + A+ + ++M++DG+
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 723
Query: 218 YSTHMCVITTLLR 230
T+ +I LL+
Sbjct: 724 LGTYTTLIDGLLK 736
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ +L+ LC+ + ++A +VV+ M +G + +L +N + +C G L A
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDG------INPNLITYNTLIDGFCGVGKLGKAL 358
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+ + +++ GL+ T++ LV G C+ G GA +V+ M E G+ T+ +I T
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 229 LRMNCYKQA 237
R + ++A
Sbjct: 419 ARSDNMEKA 427
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 125 DALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPR 184
+A ++ +S + + FG ++ + + C G++E A + + GL A+ R
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 185 TFDALVLGACKAGVVDGAIAVVRRMVEDGV-PMLYSTHMCVITTLLRMNCYKQARKYARS 243
T+ L+ G K GV + +M EDGV P LY T+ CV+ L + K A +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY-TYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 244 FGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ + + L L K+ EA ++D+M G+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 100/253 (39%), Gaps = 14/253 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P Y+ L G L+ LN GC T + I + ++ D +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 97 LSG-LNPGFTRKSA-FESLVTRLCK---LERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
L+ L GF+ F L+ LC+ L RA D L+ +M G + + ++
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE---------KMPQHGCQPNSLSY 382
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
N L +C ++ A L+R+ + G D T++ ++ CK G V+ A+ ++ ++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 212 DGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKE 271
G + T+ VI L + +A K KD DT L L KV E
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 272 AMLILDEMNQKGL 284
A+ E + G+
Sbjct: 503 AIKFFHEFERMGI 515
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 124 DDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADP 183
++ + +E+M G + D+ + +C G AA +L+ +E G D
Sbjct: 119 EEGFKFLENMVYHGNVP------DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 184 RTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARS 243
T++ ++ G CKAG ++ A++V+ RM + Y+T ++ +L KQA +
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNT---ILRSLCDSGKLKQAMEVLDR 229
Query: 244 FGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG 283
+D D L V AM +LDEM +G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 112/260 (43%), Gaps = 11/260 (4%)
Query: 42 YDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRTLSGLN 101
+D L +GD +++ + +G + H + L ID + ++
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 102 P-GFTRK-SAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYC 159
G+ + F ++ CK + + E+++V RM G+ ++ + NM + C
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESK------LFEALSVFYRMLKCGVWPNVVSFNMMIDGAC 264
Query: 160 FSGDLEAAAGVLKRI---ENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPM 216
+GD+ A +L ++ ++ + T+++++ G CKAG +D A + MV+ GV
Sbjct: 265 KTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC 324
Query: 217 LYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLIL 276
T+ ++ R +A + K ++T + + L M ++ AM +L
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 277 DEMNQKGLPMGQKLKAFYLK 296
+MN K + + + +A ++
Sbjct: 385 RDMNSKNMQIDRFTQAIVVR 404
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 6/197 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F ++ L K ++A++ +++ GRM G D++ + + C + ++ A
Sbjct: 344 FALMIVALAKNDKAEECFELI------GRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYK 397
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
L + N+G D T++ + C+ D A+ + RMVE T+ +I+
Sbjct: 398 FLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLPMGQK 289
M+ A +D D + + + L + KEA +L+E+ KGL + +
Sbjct: 458 EMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYR 517
Query: 290 LKAFYLKNAGTVNGVKG 306
+ +L V +K
Sbjct: 518 VFDSFLMRLSEVGNLKA 534
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F L+ LC + +A+ AL+++ G M+GFG D+ +N + +C S +L A+
Sbjct: 209 FNILIRGLCGVGKAEKALELL------GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 170 VLKRIENEGLAA-DPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+ K +++ + + D T+ +++ G CKAG + A +++ M+ G+ Y T+ +T
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI---YPTN---VTFN 316
Query: 229 LRMNCYKQARKY--ARSFGGKDTTL----DTQLLGCLGSKLMMLKKVKEAMLILDEMNQK 282
+ ++ Y +A + A GK + D L + +V + + +EMN +
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Query: 283 GL 284
G+
Sbjct: 377 GM 378
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F L+ LC + +A+ AL+++ G M+GFG D+ +N + +C S +L A+
Sbjct: 209 FNILIRGLCGVGKAEKALELL------GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASE 262
Query: 170 VLKRIENEGLAA-DPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+ K +++ + + D T+ +++ G CKAG + A +++ M+ G+ Y T+ +T
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI---YPTN---VTFN 316
Query: 229 LRMNCYKQARKY--ARSFGGKDTTL----DTQLLGCLGSKLMMLKKVKEAMLILDEMNQK 282
+ ++ Y +A + A GK + D L + +V + + +EMN +
Sbjct: 317 VLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Query: 283 GL 284
G+
Sbjct: 377 GM 378
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ SL+ LC + ++ E++++ +M G++ +L +N + +C + L+ A
Sbjct: 333 SYNSLINGLC------NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+ ++ +G R ++ L+ CK G +D A+ M +G+ T+ C+I L
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
R + A+K K D L + ++A ++L EM++ GL
Sbjct: 447 CRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ L+ CKL + DD + E M EG + D+ +N + C +G++EAA
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVP------DVGTYNCLIAGLCRNGNIEAAKK 457
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ ++GL D TF L+ G C+ G A +++ M + G+ + T+ V+
Sbjct: 458 LFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQL--LGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ K A R+ K+ L + L K+++A ++L+EM +KGL
Sbjct: 517 KEGNLKAATN-MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 106 RKSA--FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGD 163
R SA F SL+ K + D AL++ + M G FGL + M + S+ SG
Sbjct: 380 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL------YTMIIESHAKSGK 433
Query: 164 LEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMC 223
LE A V K +E G P T+ L+ +G VD A+ + M G+ S+++
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYIS 493
Query: 224 VITTL 228
++T L
Sbjct: 494 LLTLL 498
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
A+ +L+ LCK D ++ + M GL+ D + +F+ +YC +GD+ +A
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMG------NLGLKPDAYSFAIFIHAYCDAGDVHSAY 298
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
VL R++ L + TF+ ++ CK VD A ++ M++ G
Sbjct: 299 KVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+F L+ +C ++ + E+M + ++ G + D +N + +C A
Sbjct: 232 SFTILIDNVC------NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
GV K+++ EG+ D T++ L+ G KAG V+ A ++ MV+ G Y T+L
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG----YEPDTATYTSL 341
Query: 229 LRMNCYK 235
+ C K
Sbjct: 342 MNGMCRK 348
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ + + CK AL+ SM + L ++ + YC +GDLE A
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDA------LSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV---PMLYSTHMCVIT 226
+ K + ++ + T+ AL+ G CK G + A + RMVED V ++Y+T +I
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT---IID 276
Query: 227 TLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ A K+ + LD G + S L K+KEA I+++M + L
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ LCK + AL + + +M +G+R D+ + + C SG A
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFD------QMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+L+ + + D TF+AL+ K G A + M+ + T+ +I
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
C +AR+ K D L + KKV +AM I EM+QKGL
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
Query: 98 SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMS 157
+GL P + + S++ LCK R D+A+++ E + R+ A+N +M
Sbjct: 267 NGLKPD---EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC------TYAYNTMIMG 317
Query: 158 YCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPML 217
Y +G + A +L+R +G ++ ++ K G VD A+ V M +D P L
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNL 377
Query: 218 YSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILD 277
ST+ +I L R A + S + + + + +L +K+ EA + +
Sbjct: 378 -STYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 278 EMNQK 282
EM+ K
Sbjct: 437 EMDYK 441
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 92/230 (40%), Gaps = 48/230 (20%)
Query: 34 PDHPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCF-NTKHTFSFITATNLTSTLI-- 90
P +Y E+ ++AG ++ ++NK ++G + + F IT +L T++
Sbjct: 220 PTGTIWGFYMEI-LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSF 278
Query: 91 -------------DDVVRTLSGLNPGFTRKSAF--ESLVTRLCKLERADDALQVVESMAV 135
D+ R + TR F +L+ LCK + D A + + M
Sbjct: 279 NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 136 EG-----------------------------RMAGFGLRLDLTAHNMFLMSYCFSGDLEA 166
G +M GL+ D+ +N + +C +GDL A
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 167 AAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPM 216
A ++ + GL D T+ L+ G C+ G V+ A+ + + M ++G+ +
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 9/116 (7%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
GL P + +LV CK A +V+ M G LR D + + +
Sbjct: 375 GLQPDIV---LYNTLVNGFCKNGDLVAARNIVDGMIRRG------LRPDKITYTTLIDGF 425
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
C GD+E A + K ++ G+ D F ALV G CK G V A +R M+ G+
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 128 QVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFD 187
+ E M + + GL D+ N L + +G +GV K ++ G + TF+
Sbjct: 434 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 188 ALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARK 239
L+ + G + A+ V RRM++ GV ST+ V+ L R ++Q+ K
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ CK +A Q+ + M +G D+ +++ + SYC + ++
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKG------CEPDIVTYSILINSYCKAKRVDDGM 405
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVP 215
+ + I ++GL + T++ LVLG C++G ++ A + + MV GVP
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 12/181 (6%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+E+L+ CK R AL AV M+ + + +N+ + + GD+ AA
Sbjct: 697 YEALLKACCKSGRMQSAL------AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
++++++ EG+ D T+ + + KAG ++ A + M GV T+ +I
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEA------MLILDEMNQKG 283
R + ++A D + CL + L+ + EA M I EM + G
Sbjct: 811 RASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 870
Query: 284 L 284
L
Sbjct: 871 L 871
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F L+ L + + + A+++++ M + G A + + + Y GD A
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSA------NEHTYTKIMQGYASVGDTGKAFE 680
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVP 215
R++NEGL D T++AL+ CK+G + A+AV + M +P
Sbjct: 681 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIP 726
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
AF ++ LCK + ++ V E+M +G + ++ + + + Y SG +E A
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGS------KPNVAIYTVLIDGYAKSGSVEDAI 382
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV---PMLYSTHMCVI 225
+L R+ +EG D T+ +V G CK G V+ A+ DG+ M YS+ +I
Sbjct: 383 RLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS---LI 439
Query: 226 TTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQK 282
L + +A + K T D+ L +KV EA+ + M ++
Sbjct: 440 DGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/265 (18%), Positives = 103/265 (38%), Gaps = 31/265 (11%)
Query: 50 GTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRTLSGLNPGFTRKS- 108
G G + L + K ++G T +T++F+ +++ +D R + G +
Sbjct: 198 GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDI 257
Query: 109 -AFESLVTRLCKLERADDALQVVESMAVEGR----------------------------- 138
+ +++ CK + A++ + M G
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 139 MAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGV 198
M G+++ A ++ + C G L V + + +G + + L+ G K+G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 199 VDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGC 258
V+ AI ++ RM+++G T+ V+ L + ++A Y + +++
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 259 LGSKLMMLKKVKEAMLILDEMNQKG 283
L L +V EA + +EM++KG
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKG 462
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
L+ LCK R A++V+E M G + D +A+ + C G++ A +++
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIP------DASAYTYLVNQLCKRGNVGYAMQLVE 165
Query: 173 RIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
++E+ G ++ T++ALV G C G ++ ++ V R+++ G+
Sbjct: 166 KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 11/142 (7%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
GL P + L+ C+ + D AL + G M GL+L + +N + +
Sbjct: 397 GLRPN---DVTYSILIDMFCRRGKLDTALSFL------GEMVDTGLKLSVYPYNSLINGH 447
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV-PML 217
C GD+ AA G + + N+ L T+ +L+ G C G ++ A+ + M G+ P +
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 218 YSTHMCVITTLLRMNCYKQARK 239
Y T +++ L R + A K
Sbjct: 508 Y-TFTTLLSGLFRAGLIRDAVK 528
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P A Y+ L G +G+ +A + + ++G T+S + +D+ +
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 97 L-----SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
SGLNP + ++ L K R ++AL + M G+ DL +
Sbjct: 984 FKELKESGLNPDVV---CYNLIINGLGKSHRLEEALVLFNEMKTSR-----GITPDLYTY 1035
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
N +++ +G +E A + I+ GL + TF+AL+ G +G + A AV + MV
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Query: 212 DG 213
G
Sbjct: 1096 GG 1097
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P A Y+ L G SG ++ L ++ + C T + + + + + +DD +
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 97 LSGL--NPGFTRKSA-FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNM 153
L + F+ + + L+ L K R +A Q+ E M +G R + +N+
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML------DYGCRPNCAIYNI 931
Query: 154 FLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ + +G+ +AA + KR+ EG+ D +T+ LV C G VD + + + E G
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 214 V 214
+
Sbjct: 992 L 992
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F L+ CK R DD L++ M++ G +A + +N + +C SG LE A
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIA------NTVTYNTLVQGFCQSGKLEVAKK 459
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ + + + + D ++ L+ G C G ++ A+ + ++ + + + +M +I +
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG 283
+ A S K LD + + S+L + +A ++ +M ++G
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 18/197 (9%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILN--KRFQDGCFNTKHTFSFITATNLTSTLIDDVV 94
P + Y+ L +G + R +++ K D FN I+A LI +V
Sbjct: 215 PNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNI-----LISAYCNEQKLIQSMV 269
Query: 95 RTLSGLNPGFTRKSAFESLVTR-LCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNM 153
+ GF + V LC R +AL+V+E R+ G ++D+ A N
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLE------RVESKGGKVDVVACNT 323
Query: 154 FLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ YC G + A +E +G + T++ L+ G C G++D A+ M D
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDA 383
Query: 214 VPMLYSTHMCVITTLLR 230
+ ++T TL+R
Sbjct: 384 IRWNFAT----FNTLIR 396
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 131 ESMAVEGRMAG-FGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDAL 189
E + + R+ G L+ DL +N L Y GD+E A + K++ + + D T+++L
Sbjct: 647 EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL 706
Query: 190 VLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDT 249
+LG K G + +++ M + T+ ++ + Y A + R K
Sbjct: 707 ILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Query: 250 TLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
LD + L S L + KEA +++ EMN + L
Sbjct: 767 LLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 7/248 (2%)
Query: 33 FPDHPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDD 92
F PT Y+ L G + R I+++ G T++ I + +
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE 313
Query: 93 VVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHN 152
V+R + + G S +++ R C + L++ + A M G+ +N
Sbjct: 314 VLREMKEI--GLVPDSVSYNILIRGCS---NNGDLEM--AFAYRDEMVKQGMVPTFYTYN 366
Query: 153 MFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVED 212
+ +EAA +++ I +G+ D T++ L+ G C+ G A A+ M+ D
Sbjct: 367 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 213 GVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEA 272
G+ T+ +I L R N ++A + GK D ++ L + + A
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 273 MLILDEMN 280
+L EM+
Sbjct: 487 FSLLKEMD 494
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F SL+ C+ +R DAL + + +M G G + ++ +N + C S ++ A
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFD------QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
+L R+E +G+ D T+++L+ G C +G A +V M +
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 98/257 (38%), Gaps = 20/257 (7%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFS-----FITATNLTSTLI 90
HP Y+ L G + +LN+ G TF+ I+ N L
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 394
Query: 91 DDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTA 150
+ GL P + ++ L+ LCK D A M G G R+ T
Sbjct: 395 MFYMMEAKGLTPS---EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG---RITYTG 448
Query: 151 HNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMV 210
+ C +G L+ A +L + +G+ D T+ AL+ G CK G A +V R+
Sbjct: 449 ---MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 211 EDGVP---MLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLK 267
G+ ++YST +I RM C K+A + + + T D L + L
Sbjct: 506 RVGLSPNGIIYST---LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562
Query: 268 KVKEAMLILDEMNQKGL 284
KV EA + M G+
Sbjct: 563 KVAEAEEFMRCMTSDGI 579
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 45/234 (19%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVR 95
H Y L++ AG + +L+ + +++++ ++GC T++ + + + I +
Sbjct: 187 HRVGIYNTMLSI-AGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLL 245
Query: 96 TLSGL-NPGFT-RKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLR-------- 145
+ GF +A+ ++ LC R D AL+ + M +G FGLR
Sbjct: 246 VFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKG--ITFGLRTYKMLLDC 303
Query: 146 --------------------LDLTAHNMF---LMSYCFSGDLEAAAGVLKRIENEGLAAD 182
+++ H+ F L S+C SG ++ A +++ ++N+ + D
Sbjct: 304 IAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD 363
Query: 183 PRTFDALVLGACKAGVVDGAIAVV----RRMVEDGVPMLYSTHMCVITTLLRMN 232
+ F+ LV G C+A + A+ +V RR ++D + + +I+ LR N
Sbjct: 364 AKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDS-----NVYGIIISGYLRQN 412
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Query: 117 LCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIEN 176
CK+ + ++A++++ S F LR ++ ++ FL + C +GD+ A+ + + I
Sbjct: 351 FCKVGKPEEAIKLIHS---------FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 177 EGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQ 236
GL D + ++ G C G D A +++ G P +T +I R
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISD 461
Query: 237 ARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
A R+ + LD L ++ + ++DEM G+
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI 509
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Query: 117 LCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIEN 176
CK+ + ++A++++ S F LR ++ ++ FL + C +GD+ A+ + + I
Sbjct: 351 FCKVGKPEEAIKLIHS---------FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 177 EGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQ 236
GL D + ++ G C G D A +++ G P +T +I R
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISD 461
Query: 237 ARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
A R+ + LD L ++ + ++DEM G+
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI 509
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 86/201 (42%), Gaps = 6/201 (2%)
Query: 103 GFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSG 162
GF ++ +L+ C+ A ++ E M +G + +++ + + ++ G
Sbjct: 321 GFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKG------MVMNVVTYTSLIKAFLREG 374
Query: 163 DLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHM 222
+ A +L ++ GL+ D + ++ CK+G VD A V M+E + ++
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Query: 223 CVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQK 282
+I+ L R +A K GK+ D + L+ KK+ A + D+M K
Sbjct: 435 SLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDK 494
Query: 283 GLPMGQKLKAFYLKNAGTVNG 303
G + + + +K + +++
Sbjct: 495 GFTLDRDVSDTLIKASCSMSA 515
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ SL+ C +R D+A + E M + ++ +N + +C + +E
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFP------NVVTYNTLIKGFCKAKRVEEGME 416
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVP 215
+ + + GL + T++ L+ G +AG D A + ++MV DGVP
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462