Miyakogusa Predicted Gene

Lj0g3v0085909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085909.1 tr|C0Z237|C0Z237_ARATH AT3G58170 protein
OS=Arabidopsis thaliana GN=AT3G58170 PE=4 SV=1,60.53,2e-18,no
description,NULL; T_SNARE,Target SNARE coiled-coil domain; seg,NULL;
BET1-LIKE SNARE 1,NULL; GOLG,CUFF.4568.1
         (133 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14455.1 | Symbols: ATBET12, BET12, ATBS14B, BS14B | Target S...   149   4e-37
AT3G58170.1 | Symbols: ATBS14A, ATBET11, BET11, BS14A | BET1P/SF...   130   2e-31

>AT4G14455.1 | Symbols: ATBET12, BET12, ATBS14B, BS14B | Target
           SNARE coiled-coil domain protein | chr4:8310482-8311938
           FORWARD LENGTH=130
          Length = 130

 Score =  149 bits (377), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 72/130 (55%), Positives = 96/130 (73%), Gaps = 2/130 (1%)

Query: 1   MSYRRDNXXXXXXXXXXXXXXXXXXXKASSSYSHEINEQDNDKAVESLHDRVTFLKRLTG 60
           M++RR+N                   +ASSSY+H+  E+DND+A+E+L DRV+FLKR+TG
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAHD--ERDNDEALENLQDRVSFLKRVTG 58

Query: 61  DIHEEVESHNSLLDRVGSKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLAAYFTVAFIFI 120
           DIHEEVE+HN LLD+VG+KMD +RG+M GT++RFK VFEKKS RK+C L AYF + F+ +
Sbjct: 59  DIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIM 118

Query: 121 YYLIRMLGYF 130
           YYLIR+L Y 
Sbjct: 119 YYLIRLLNYI 128


>AT3G58170.1 | Symbols: ATBS14A, ATBET11, BET11, BS14A |
           BET1P/SFT1P-like protein 14A | chr3:21542632-21543775
           REVERSE LENGTH=122
          Length = 122

 Score =  130 bits (327), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/99 (60%), Positives = 78/99 (78%)

Query: 27  KASSSYSHEINEQDNDKAVESLHDRVTFLKRLTGDIHEEVESHNSLLDRVGSKMDGSRGM 86
           +A+SSYSHEINE +N++A+E L DRV  LKRL+GDI+EEV++HN +LDR+G+ MD SRG 
Sbjct: 24  RAASSYSHEINEHENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDRMGNDMDSSRGF 83

Query: 87  MLGTMDRFKKVFEKKSTRKTCSLAAYFTVAFIFIYYLIR 125
           + GTMDRFK VFE KS+R+  +L A F   F+ IYYL R
Sbjct: 84  LSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYLTR 122