Miyakogusa Predicted Gene

Lj0g3v0085719.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085719.1 tr|A9TMC7|A9TMC7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_147689,37.7,0.000000000000001,Allene oxide
cyclase-like,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Allene_ox_cyc,Allen,gene.g6397.t1.1
         (257 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13280.1 | Symbols: AOC4 | allene oxide cyclase 4 | chr1:4547...   185   2e-47
AT3G25780.1 | Symbols: AOC3 | allene oxide cyclase 3 | chr3:9409...   181   3e-46
AT3G25760.1 | Symbols: AOC1, ERD12 | allene oxide cyclase 1 | ch...   179   1e-45
AT3G25770.1 | Symbols: AOC2 | allene oxide cyclase 2 | chr3:9406...   179   1e-45

>AT1G13280.1 | Symbols: AOC4 | allene oxide cyclase 4 |
           chr1:4547624-4548552 FORWARD LENGTH=254
          Length = 254

 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/187 (52%), Positives = 117/187 (62%), Gaps = 36/187 (19%)

Query: 107 CRSHATESSDTEKVQELNVYEINERDRGSPAYLRLGFKPVN-SLGDLVPFSNKLYTGDLQ 165
           C S + + S   K+QELNVYE NE DR SPA L+LG KP    LGDLVPF+NKLYTGDL 
Sbjct: 68  CSSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLT 127

Query: 166 KRIVISAGICILIEHKEEKQGARYEAIYAFYFGDYGHIAVQGPYLTYEDTWLAVT----- 220
           KRI I+AG+C+LI+H  EK+G R+EA Y+FYFGDYGHI+VQGPYLTYEDT+LA+T     
Sbjct: 128 KRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLAITGGSGV 187

Query: 221 ------------------------------DLPQELLGKPVEPHPSVEATPAAKALEPHA 250
                                         DLP EL GK VEP   V+    A+A +P A
Sbjct: 188 FEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEAQATQPGA 247

Query: 251 TIAGFTN 257
           TIA FTN
Sbjct: 248 TIANFTN 254


>AT3G25780.1 | Symbols: AOC3 | allene oxide cyclase 3 |
           chr3:9409362-9410409 FORWARD LENGTH=258
          Length = 258

 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/194 (50%), Positives = 117/194 (60%), Gaps = 36/194 (18%)

Query: 100 VPKKSFSCRSHATESSDTEKVQELNVYEINERDRGSPAYLRLGFKPVN-SLGDLVPFSNK 158
           V +  F      TE+S   K+QELNVYE+NE DR SPA L+LG KP    LGDLVPF+NK
Sbjct: 65  VTRAFFWNWGKKTENSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNK 124

Query: 159 LYTGDLQKRIVISAGICILIEHKEEKQGARYEAIYAFYFGDYGHIAVQGPYLTYEDTWLA 218
           LYTGDL+KR+ I+AG+C+LI+H  EK G R+EA Y+FYFGDYGH++VQG YLTYEDT+LA
Sbjct: 125 LYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFLA 184

Query: 219 VT-----------------------------------DLPQELLGKPVEPHPSVEATPAA 243
           VT                                   DLP EL G  V P   V+  P A
Sbjct: 185 VTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAPEA 244

Query: 244 KALEPHATIAGFTN 257
           KA+EP   I+ FTN
Sbjct: 245 KAMEPSGVISNFTN 258


>AT3G25760.1 | Symbols: AOC1, ERD12 | allene oxide cyclase 1 |
           chr3:9403972-9405105 FORWARD LENGTH=254
          Length = 254

 Score =  179 bits (455), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 93/194 (47%), Positives = 117/194 (60%), Gaps = 35/194 (18%)

Query: 99  LVPKKSFSCRSHATESSDTEKVQELNVYEINERDRGSPAYLRLGFKPVNSLGDLVPFSNK 158
           L P ++ S     TE+    KVQEL+VYEIN+ DR SP  L+  F     LGDLVPF+NK
Sbjct: 61  LTPTRALSQNLGNTENPRPSKVQELSVYEINDLDRHSPKILKNAFSFRFGLGDLVPFTNK 120

Query: 159 LYTGDLQKRIVISAGICILIEHKEEKQGARYEAIYAFYFGDYGHIAVQGPYLTYEDTWLA 218
           LYTGDL+KR+ I+AG+C++IEH  EK G R+EA Y+FYFGDYGH++VQGPYLTYED++LA
Sbjct: 121 LYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDSFLA 180

Query: 219 VT-----------------------------------DLPQELLGKPVEPHPSVEATPAA 243
           +T                                   DLP EL+G PV P   VE  P A
Sbjct: 181 ITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPAPEA 240

Query: 244 KALEPHATIAGFTN 257
           KAL+P   ++ FTN
Sbjct: 241 KALKPSGVVSNFTN 254


>AT3G25770.1 | Symbols: AOC2 | allene oxide cyclase 2 |
           chr3:9406975-9407839 FORWARD LENGTH=253
          Length = 253

 Score =  179 bits (455), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 120/200 (60%), Gaps = 40/200 (20%)

Query: 98  SLVPKKSFSCRSHATESSDTE-----KVQELNVYEINERDRGSPAYLRLGFKPVNSLGDL 152
           S   KK+ +     +++ + E     KVQEL+VYEINE DR SP  L+  F  +  LGDL
Sbjct: 54  SFTAKKNLTASRALSQNGNIENPRPSKVQELSVYEINELDRHSPKILKNAFSLMFGLGDL 113

Query: 153 VPFSNKLYTGDLQKRIVISAGICILIEHKEEKQGARYEAIYAFYFGDYGHIAVQGPYLTY 212
           VPF+NKLYTGDL+KR+ I+AG+C++IEH  EK+G R+EA Y+FYFGDYGH++VQGPYLTY
Sbjct: 114 VPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTY 173

Query: 213 EDTWLAVT-----------------------------------DLPQELLGKPVEPHPSV 237
           ED++LA+T                                   DLP EL G PV P   +
Sbjct: 174 EDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDI 233

Query: 238 EATPAAKALEPHATIAGFTN 257
           E  P AKALEP   I+ +TN
Sbjct: 234 EPAPEAKALEPSGVISNYTN 253