Miyakogusa Predicted Gene

Lj0g3v0085549.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085549.1 tr|Q9FPM4|Q9FPM4_PETCR Myosin subfamily VIII
heavy chain OS=Petroselinum crispum PE=2 SV=1,53.85,4e-19,MYOSIN
VIII,NULL; MYOSIN,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL,NODE_67526_length_1295_cov_36.851738.path2.1
         (201 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19960.2 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FO...   186   7e-48
AT3G19960.1 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FO...   186   7e-48
AT1G50360.1 | Symbols: VIIIA, ATVIIIA | P-loop containing nucleo...   170   7e-43
AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:220...   110   6e-25
AT4G27370.1 | Symbols: VIIIB, ATVIIIB | P-loop containing nucleo...    87   1e-17
AT5G54280.1 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:220...    71   4e-13
AT1G08730.1 | Symbols: XIC, ATXIC | Myosin family protein with D...    51   5e-07
AT2G33240.1 | Symbols: XID, ATXID | myosin XI D | chr2:14086942-...    50   8e-07
AT4G33200.3 | Symbols: XI-I | myosin, putative | chr4:16002768-1...    48   5e-06
AT4G33200.1 | Symbols: XI-I, ATXI-I, XI-15 | myosin, putative | ...    48   5e-06
AT4G33200.2 | Symbols: XI-I | myosin, putative | chr4:16002768-1...    48   5e-06
AT1G04600.1 | Symbols: XIA, ATXIA | myosin XI A | chr1:1262123-1...    47   7e-06

>AT3G19960.2 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736
           FORWARD LENGTH=1176
          Length = 1176

 Score =  186 bits (473), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/206 (54%), Positives = 130/206 (63%), Gaps = 17/206 (8%)

Query: 3   LASRVLPALQPMKSLPPDRRENCGDAKLRSSDVIGTSSPIDDALIGEEVSEEAQDRAG-- 60
           ++ +V P +Q +KSLP D R +        SD +  SS     L    V  +   R G  
Sbjct: 1   MSQKVTPFMQSLKSLPADYRFDGSPV----SDRLENSSGASVRLTNSNVPRKGGLRNGVS 56

Query: 61  --DNGLFD-EDLAYSGKGVSVEERPSTADED--LESVPLPFQPVSMSSRELRWSDTTPYA 115
             D    D ED  YSG GV VEE+  T D D    ++PLP       S E RWSDT+ YA
Sbjct: 57  RTDTAAGDSEDSPYSGHGVFVEEQSLTDDVDSGAATMPLP------QSDERRWSDTSAYA 110

Query: 116 SKKKLQSWFQLPNGNWELVKIITTSGTESVISLLDGKVLKVKEEILVQANPDILDGVDDL 175
            KK LQSW QLPNGNWEL KI++TSG ESVISL +GKV+KV  E LV ANPDILDGVDDL
Sbjct: 111 RKKILQSWIQLPNGNWELGKILSTSGEESVISLPEGKVIKVISETLVPANPDILDGVDDL 170

Query: 176 MQLSYLNEPSVLYNLQYRYNQNMIYV 201
           MQLSYLNEPSVLYNL YRYNQ+MIY 
Sbjct: 171 MQLSYLNEPSVLYNLNYRYNQDMIYT 196


>AT3G19960.1 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736
           FORWARD LENGTH=1166
          Length = 1166

 Score =  186 bits (473), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/206 (54%), Positives = 130/206 (63%), Gaps = 17/206 (8%)

Query: 3   LASRVLPALQPMKSLPPDRRENCGDAKLRSSDVIGTSSPIDDALIGEEVSEEAQDRAG-- 60
           ++ +V P +Q +KSLP D R +        SD +  SS     L    V  +   R G  
Sbjct: 1   MSQKVTPFMQSLKSLPADYRFDGSPV----SDRLENSSGASVRLTNSNVPRKGGLRNGVS 56

Query: 61  --DNGLFD-EDLAYSGKGVSVEERPSTADED--LESVPLPFQPVSMSSRELRWSDTTPYA 115
             D    D ED  YSG GV VEE+  T D D    ++PLP       S E RWSDT+ YA
Sbjct: 57  RTDTAAGDSEDSPYSGHGVFVEEQSLTDDVDSGAATMPLP------QSDERRWSDTSAYA 110

Query: 116 SKKKLQSWFQLPNGNWELVKIITTSGTESVISLLDGKVLKVKEEILVQANPDILDGVDDL 175
            KK LQSW QLPNGNWEL KI++TSG ESVISL +GKV+KV  E LV ANPDILDGVDDL
Sbjct: 111 RKKILQSWIQLPNGNWELGKILSTSGEESVISLPEGKVIKVISETLVPANPDILDGVDDL 170

Query: 176 MQLSYLNEPSVLYNLQYRYNQNMIYV 201
           MQLSYLNEPSVLYNL YRYNQ+MIY 
Sbjct: 171 MQLSYLNEPSVLYNLNYRYNQDMIYT 196


>AT1G50360.1 | Symbols: VIIIA, ATVIIIA | P-loop containing
           nucleoside triphosphate hydrolases superfamily protein |
           chr1:18650688-18657106 FORWARD LENGTH=1153
          Length = 1153

 Score =  170 bits (430), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/209 (48%), Positives = 125/209 (59%), Gaps = 31/209 (14%)

Query: 3   LASRVLPALQPMKSLPPDRRENCGDAKLRSSDVIGTSSPIDDALIGEEVSE-EAQDRAGD 61
           +A +V  + Q +K++P D R             +G  SPI D L    ++      + G 
Sbjct: 1   MAHKVKASFQSLKTMPADYR------------FLG--SPISDHLETNLITPPNGHLKNGV 46

Query: 62  NGL---------FDEDLAYSGKGVSVEERPSTADEDLESVPLPFQPVSMSSRELRWSDTT 112
           NG           +ED  YS + +   ER S  D D   +PLP       S + +WSDT 
Sbjct: 47  NGTASSVGGMDSVNEDSPYSVRSILNGERSSIGDGD-SILPLP------ESNDRKWSDTN 99

Query: 113 PYASKKKLQSWFQLPNGNWELVKIITTSGTESVISLLDGKVLKVKEEILVQANPDILDGV 172
            YA KK LQ W QLPNGNWEL KI++TSG ESVI + +GKVLKVK E LV ANPDILDGV
Sbjct: 100 VYARKKVLQFWVQLPNGNWELGKIMSTSGEESVIVVTEGKVLKVKSETLVPANPDILDGV 159

Query: 173 DDLMQLSYLNEPSVLYNLQYRYNQNMIYV 201
           DDLMQLSYLNEP+VLYNL+YRYNQ+MIY 
Sbjct: 160 DDLMQLSYLNEPAVLYNLEYRYNQDMIYT 188


>AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 |
           chr5:22039606-22045592 REVERSE LENGTH=1220
          Length = 1220

 Score =  110 bits (275), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 59/128 (46%), Positives = 80/128 (62%), Gaps = 7/128 (5%)

Query: 80  ERPSTADEDLESVPLPFQPVSMSSR-------ELRWSDTTPYASKKKLQSWFQLPNGNWE 132
           E P  A+++ E V +    VS+          E  W++   Y  KKKL+ W ++ NG W+
Sbjct: 116 ESPYAAEKEEEGVKISIAKVSLVENTEEHNKPESEWNNNVEYFIKKKLRVWCRVSNGQWQ 175

Query: 133 LVKIITTSGTESVISLLDGKVLKVKEEILVQANPDILDGVDDLMQLSYLNEPSVLYNLQY 192
           L KI +TS   S++ L    V+KV  E L  ANPDIL+GV+DL+QLSYLNEPSVLYNL+ 
Sbjct: 176 LGKIQSTSADTSLVMLSTANVVKVSTEELFPANPDILEGVEDLIQLSYLNEPSVLYNLRV 235

Query: 193 RYNQNMIY 200
           RY Q++IY
Sbjct: 236 RYLQDVIY 243


>AT4G27370.1 | Symbols: VIIIB, ATVIIIB | P-loop containing
           nucleoside triphosphate hydrolases superfamily protein |
           chr4:13694881-13700780 REVERSE LENGTH=1134
          Length = 1134

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 3/95 (3%)

Query: 108 WSDTTPYASKKKLQSWFQLP-NGNWELVKIITTSGTESVISLLDGKV-LKVKEEILVQAN 165
           W ++  Y  ++KL  W ++  NG W L KI +TS ++ V  +L     ++  EEI   AN
Sbjct: 101 WINSAEYFVREKLCVWCRVAANGQWHLGKIHSTSSSDDVCVMLSANDDVRTMEEIF-PAN 159

Query: 166 PDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIY 200
           P+IL+GV+DL QLSYLNEPS+LYNL+ RY+Q++IY
Sbjct: 160 PEILEGVEDLTQLSYLNEPSLLYNLRVRYSQDLIY 194


>AT5G54280.1 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 |
           chr5:22039606-22044715 REVERSE LENGTH=1030
          Length = 1030

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/48 (70%), Positives = 41/48 (85%)

Query: 153 VLKVKEEILVQANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIY 200
           V+KV  E L  ANPDIL+GV+DL+QLSYLNEPSVLYNL+ RY Q++IY
Sbjct: 7   VVKVSTEELFPANPDILEGVEDLIQLSYLNEPSVLYNLRVRYLQDVIY 54


>AT1G08730.1 | Symbols: XIC, ATXIC | Myosin family protein with Dil
           domain | chr1:2779963-2788325 FORWARD LENGTH=1538
          Length = 1538

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 7/82 (8%)

Query: 123 WFQLPNGNWELVKIITTSGTESVISLLDGKVLKVKEEILVQANPDILD----GVDDLMQL 178
           WF+ P   W   ++   +G E VI    GK +  K   L +  P  ++    GVDD+ +L
Sbjct: 22  WFEDPEVAWIDGEVEKINGQEVVIQATTGKKVTAK---LSKIYPKDVEAPAGGVDDMTKL 78

Query: 179 SYLNEPSVLYNLQYRYNQNMIY 200
           SYL+EP VL NL+ RY  N IY
Sbjct: 79  SYLHEPGVLQNLKIRYELNEIY 100


>AT2G33240.1 | Symbols: XID, ATXID | myosin XI D |
           chr2:14086942-14096914 REVERSE LENGTH=1770
          Length = 1770

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 108 WSDTTPYASKKKL--QSWFQLPNGNWELVKIITTSGTESVISLLDGKVLKVKEEILVQAN 165
           +S+ +P + K  +  Q W + P+  W   +++  +G E  ++    K +  K   +   +
Sbjct: 14  FSNVSPASVKVTVGSQVWVEDPDEAWLDGEVVEANGQEIKVNC-QTKTVVAKVNAVHPKD 72

Query: 166 PDILD-GVDDLMQLSYLNEPSVLYNLQYRYNQNMIYV 201
           P+  + GVDD+ +L+YL+EP VL NL+ RYN N IY 
Sbjct: 73  PEFPELGVDDMTKLAYLHEPGVLLNLKARYNANEIYT 109


>AT4G33200.3 | Symbols: XI-I | myosin, putative |
           chr4:16002768-16014792 REVERSE LENGTH=1503
          Length = 1503

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 151 GKVLKVKEEILVQANPD--ILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYV 201
           GK + V  E L + +PD    +GVDD+ +L+YL+E  VLYNLQ RY  N IY 
Sbjct: 46  GKKVFVSPEKLFRRDPDDEEHNGVDDMTKLTYLHEAGVLYNLQRRYALNDIYT 98


>AT4G33200.1 | Symbols: XI-I, ATXI-I, XI-15 | myosin, putative |
           chr4:16002768-16014792 REVERSE LENGTH=1522
          Length = 1522

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 151 GKVLKVKEEILVQANPD--ILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYV 201
           GK + V  E L + +PD    +GVDD+ +L+YL+E  VLYNLQ RY  N IY 
Sbjct: 46  GKKVFVSPEKLFRRDPDDEEHNGVDDMTKLTYLHEAGVLYNLQRRYALNDIYT 98


>AT4G33200.2 | Symbols: XI-I | myosin, putative |
           chr4:16002768-16014792 REVERSE LENGTH=1492
          Length = 1492

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 151 GKVLKVKEEILVQANPD--ILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYV 201
           GK + V  E L + +PD    +GVDD+ +L+YL+E  VLYNLQ RY  N IY 
Sbjct: 46  GKKVFVSPEKLFRRDPDDEEHNGVDDMTKLTYLHEAGVLYNLQRRYALNDIYT 98


>AT1G04600.1 | Symbols: XIA, ATXIA | myosin XI A |
           chr1:1262123-1272376 FORWARD LENGTH=1730
          Length = 1730

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 123 WFQLPNGNWELVKIITTSGTESVISLLDGKVLKVKEEILVQANPDILD-GVDDLMQLSYL 181
           W + P+  W +   +    +E +     GK +  K   +   +P+  + GVDD+ +L+YL
Sbjct: 14  WVEDPDDAW-IDGEVEEVNSEEITVNCSGKTVVAKLNNVYPKDPEFPELGVDDMTKLAYL 72

Query: 182 NEPSVLYNLQYRYNQNMIYV 201
           +EP VL NL+ RYN N IY 
Sbjct: 73  HEPGVLLNLKCRYNANEIYT 92