Miyakogusa Predicted Gene

Lj0g3v0085019.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085019.1 Non Chatacterized Hit- tr|K4CT64|K4CT64_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,83.67,0.000000000000002,coiled-coil,NULL; seg,NULL;
UNCHARACTERIZED,NULL,CUFF.4479.1
         (182 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30050.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   170   5e-43
AT5G01970.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   169   1e-42
AT2G30530.1 | Symbols:  | unknown protein; LOCATED IN: cellular_...   166   9e-42
AT4G02800.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   101   2e-22

>AT1G30050.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G01970.1); Has 246 Blast hits to 244 proteins
           in 61 species: Archae - 0; Bacteria - 8; Metazoa - 78;
           Fungi - 10; Plants - 117; Viruses - 0; Other Eukaryotes
           - 33 (source: NCBI BLink). | chr1:10543177-10544418
           FORWARD LENGTH=389
          Length = 389

 Score =  170 bits (430), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 82/101 (81%), Positives = 93/101 (92%), Gaps = 1/101 (0%)

Query: 12  RELKTVKADLAFAKDRCAQLEEENRILHENRERGDSHD-DDDLIRLQLETLLAEKARLAH 70
           RELKTVKADLAFAK+RC+QLEEEN+ L +NR++G+++  DDDLIRLQLETLLAEKARLAH
Sbjct: 205 RELKTVKADLAFAKERCSQLEEENKRLRDNRDKGNNNPADDDLIRLQLETLLAEKARLAH 264

Query: 71  ENSVYARENRFLREVVEYHQLTMQDVVYFDEANEEVTEVNP 111
           ENS+YARENRFLRE+VEYHQLTMQDVVY DE  EEV EVNP
Sbjct: 265 ENSIYARENRFLREIVEYHQLTMQDVVYIDEGIEEVAEVNP 305


>AT5G01970.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins
           in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51;
           Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes
           - 36 (source: NCBI BLink). | chr5:373014-374651 REVERSE
           LENGTH=351
          Length = 351

 Score =  169 bits (427), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 82/102 (80%), Positives = 93/102 (91%), Gaps = 1/102 (0%)

Query: 12  RELKTVKADLAFAKDRCAQLEEENRILHEN-RERGDSHDDDDLIRLQLETLLAEKARLAH 70
           RELKTVKADLAFAK+RCAQLEEEN+ L E+ RE+G +  D+DLIRLQLE+LLAEKARLAH
Sbjct: 208 RELKTVKADLAFAKERCAQLEEENKHLRESHREKGSNPADEDLIRLQLESLLAEKARLAH 267

Query: 71  ENSVYARENRFLREVVEYHQLTMQDVVYFDEANEEVTEVNPL 112
           ENSVYARENRFLRE+VEYHQLTMQDVVY DE +EEVT+V+P 
Sbjct: 268 ENSVYARENRFLREIVEYHQLTMQDVVYIDEGSEEVTQVSPF 309


>AT2G30530.1 | Symbols:  | unknown protein; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 25 plant
           structures; EXPRESSED DURING: 15 growth stages; BEST
           Arabidopsis thaliana protein match is: unknown protein
           (TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins
           in 154 species: Archae - 0; Bacteria - 30; Metazoa -
           615; Fungi - 144; Plants - 149; Viruses - 12; Other
           Eukaryotes - 4563 (source: NCBI BLink). |
           chr2:13009071-13010867 FORWARD LENGTH=371
          Length = 371

 Score =  166 bits (419), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 82/102 (80%), Positives = 89/102 (87%), Gaps = 2/102 (1%)

Query: 12  RELKTVKADLAFAKDRCAQLEEENRILHENRERGDSH-DDDDLIRLQLETLLAEKARLAH 70
           RELK VK+DLAFAK RCAQLEEEN++L ENR  GDS  DDDDL+RLQLETLLAEKARLAH
Sbjct: 248 RELKMVKSDLAFAKQRCAQLEEENKVLRENRS-GDSQTDDDDLVRLQLETLLAEKARLAH 306

Query: 71  ENSVYARENRFLREVVEYHQLTMQDVVYFDEANEEVTEVNPL 112
           ENS+Y REN +LR VVEYHQLTMQDVVYFDE  EEVTEV P+
Sbjct: 307 ENSIYTRENLYLRGVVEYHQLTMQDVVYFDEKTEEVTEVYPI 348


>AT4G02800.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast;
           EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9
           growth stages; BEST Arabidopsis thaliana protein match
           is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast
           hits to 2720 proteins in 308 species: Archae - 13;
           Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants -
           183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI
           BLink). | chr4:1250126-1251478 FORWARD LENGTH=333
          Length = 333

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/85 (57%), Positives = 67/85 (78%)

Query: 12  RELKTVKADLAFAKDRCAQLEEENRILHENRERGDSHDDDDLIRLQLETLLAEKARLAHE 71
           RELKT+K+DL+F ++RC  LEEEN+ L +   +G   ++DDL+RLQLE LLAEKARLA+E
Sbjct: 197 RELKTIKSDLSFIQERCGLLEEENKRLRDGFVKGVRPEEDDLVRLQLEVLLAEKARLANE 256

Query: 72  NSVYARENRFLREVVEYHQLTMQDV 96
           N+   REN+ L ++VEYHQ+T QD+
Sbjct: 257 NANLVRENQCLHQMVEYHQITSQDL 281