Miyakogusa Predicted Gene
- Lj0g3v0085019.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0085019.1 Non Chatacterized Hit- tr|K4CT64|K4CT64_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,83.67,0.000000000000002,coiled-coil,NULL; seg,NULL;
UNCHARACTERIZED,NULL,CUFF.4479.1
(182 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30050.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 170 5e-43
AT5G01970.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 169 1e-42
AT2G30530.1 | Symbols: | unknown protein; LOCATED IN: cellular_... 166 9e-42
AT4G02800.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 101 2e-22
>AT1G30050.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G01970.1); Has 246 Blast hits to 244 proteins
in 61 species: Archae - 0; Bacteria - 8; Metazoa - 78;
Fungi - 10; Plants - 117; Viruses - 0; Other Eukaryotes
- 33 (source: NCBI BLink). | chr1:10543177-10544418
FORWARD LENGTH=389
Length = 389
Score = 170 bits (430), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/101 (81%), Positives = 93/101 (92%), Gaps = 1/101 (0%)
Query: 12 RELKTVKADLAFAKDRCAQLEEENRILHENRERGDSHD-DDDLIRLQLETLLAEKARLAH 70
RELKTVKADLAFAK+RC+QLEEEN+ L +NR++G+++ DDDLIRLQLETLLAEKARLAH
Sbjct: 205 RELKTVKADLAFAKERCSQLEEENKRLRDNRDKGNNNPADDDLIRLQLETLLAEKARLAH 264
Query: 71 ENSVYARENRFLREVVEYHQLTMQDVVYFDEANEEVTEVNP 111
ENS+YARENRFLRE+VEYHQLTMQDVVY DE EEV EVNP
Sbjct: 265 ENSIYARENRFLREIVEYHQLTMQDVVYIDEGIEEVAEVNP 305
>AT5G01970.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins
in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51;
Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes
- 36 (source: NCBI BLink). | chr5:373014-374651 REVERSE
LENGTH=351
Length = 351
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/102 (80%), Positives = 93/102 (91%), Gaps = 1/102 (0%)
Query: 12 RELKTVKADLAFAKDRCAQLEEENRILHEN-RERGDSHDDDDLIRLQLETLLAEKARLAH 70
RELKTVKADLAFAK+RCAQLEEEN+ L E+ RE+G + D+DLIRLQLE+LLAEKARLAH
Sbjct: 208 RELKTVKADLAFAKERCAQLEEENKHLRESHREKGSNPADEDLIRLQLESLLAEKARLAH 267
Query: 71 ENSVYARENRFLREVVEYHQLTMQDVVYFDEANEEVTEVNPL 112
ENSVYARENRFLRE+VEYHQLTMQDVVY DE +EEVT+V+P
Sbjct: 268 ENSVYARENRFLREIVEYHQLTMQDVVYIDEGSEEVTQVSPF 309
>AT2G30530.1 | Symbols: | unknown protein; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G01970.1); Has 5513 Blast hits to 872 proteins
in 154 species: Archae - 0; Bacteria - 30; Metazoa -
615; Fungi - 144; Plants - 149; Viruses - 12; Other
Eukaryotes - 4563 (source: NCBI BLink). |
chr2:13009071-13010867 FORWARD LENGTH=371
Length = 371
Score = 166 bits (419), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/102 (80%), Positives = 89/102 (87%), Gaps = 2/102 (1%)
Query: 12 RELKTVKADLAFAKDRCAQLEEENRILHENRERGDSH-DDDDLIRLQLETLLAEKARLAH 70
RELK VK+DLAFAK RCAQLEEEN++L ENR GDS DDDDL+RLQLETLLAEKARLAH
Sbjct: 248 RELKMVKSDLAFAKQRCAQLEEENKVLRENRS-GDSQTDDDDLVRLQLETLLAEKARLAH 306
Query: 71 ENSVYARENRFLREVVEYHQLTMQDVVYFDEANEEVTEVNPL 112
ENS+Y REN +LR VVEYHQLTMQDVVYFDE EEVTEV P+
Sbjct: 307 ENSIYTRENLYLRGVVEYHQLTMQDVVYFDEKTEEVTEVYPI 348
>AT4G02800.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G01970.1); Has 3209 Blast
hits to 2720 proteins in 308 species: Archae - 13;
Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants -
183; Viruses - 21; Other Eukaryotes - 1325 (source: NCBI
BLink). | chr4:1250126-1251478 FORWARD LENGTH=333
Length = 333
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 67/85 (78%)
Query: 12 RELKTVKADLAFAKDRCAQLEEENRILHENRERGDSHDDDDLIRLQLETLLAEKARLAHE 71
RELKT+K+DL+F ++RC LEEEN+ L + +G ++DDL+RLQLE LLAEKARLA+E
Sbjct: 197 RELKTIKSDLSFIQERCGLLEEENKRLRDGFVKGVRPEEDDLVRLQLEVLLAEKARLANE 256
Query: 72 NSVYARENRFLREVVEYHQLTMQDV 96
N+ REN+ L ++VEYHQ+T QD+
Sbjct: 257 NANLVRENQCLHQMVEYHQITSQDL 281