Miyakogusa Predicted Gene

Lj0g3v0084859.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0084859.1 Non Chatacterized Hit- tr|D8S2E4|D8S2E4_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.72,5e-19,Nucleotidyltransferase,NULL; no description,NULL;
NTP_transf_2,Nucleotidyl transferase domain; ZINC ,CUFF.4526.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39740.1 | Symbols:  | Nucleotidyltransferase family protein ...   197   2e-51
AT3G45750.1 | Symbols:  | Nucleotidyltransferase family protein ...   100   4e-22
AT3G45750.2 | Symbols:  | Nucleotidyltransferase family protein ...    71   4e-13
AT3G45760.1 | Symbols:  | Nucleotidyltransferase family protein ...    68   3e-12
AT2G45620.1 | Symbols:  | Nucleotidyltransferase family protein ...    66   1e-11
AT3G45760.2 | Symbols:  | Nucleotidyltransferase family protein ...    59   1e-09
AT5G53770.1 | Symbols:  | Nucleotidyltransferase family protein ...    47   4e-06

>AT2G39740.1 | Symbols:  | Nucleotidyltransferase family protein |
           chr2:16576250-16578704 FORWARD LENGTH=511
          Length = 511

 Score =  197 bits (502), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 97/166 (58%), Positives = 122/166 (73%)

Query: 1   MSTRSMLDIVLHDILRVVTPLQEDWAIRFAIINDFRSIVESVESLRGATVEPYGSFVSNL 60
           MS    LD  L +IL+V+ P + D   R  +I+  R +++SVE LRGATV+P+GSFVSNL
Sbjct: 1   MSRNPFLDPTLQEILQVIKPTRADRDTRITVIDQLRDVLQSVECLRGATVQPFGSFVSNL 60

Query: 61  FTRWGDLDISIELSNGSHISSIGKNQKQRLLGDLIKALKLKGGWINLQFISHARVPILKF 120
           FTRWGDLDIS++L +GS I   GK QKQ LLG L++AL+  G W  LQF+ HARVPILK 
Sbjct: 61  FTRWGDLDISVDLFSGSSILFTGKKQKQTLLGHLLRALRASGLWYKLQFVIHARVPILKV 120

Query: 121 KSRRQGVSCDISINNLQGVIKSKLLLSIDRIDGRFRDMVLVVKEWA 166
            S  Q +SCDISI+NL G++KS+ L  I  IDGRFRD+VL+VKEWA
Sbjct: 121 VSGHQRISCDISIDNLDGLLKSRFLFWISEIDGRFRDLVLLVKEWA 166


>AT3G45750.1 | Symbols:  | Nucleotidyltransferase family protein |
           chr3:16793855-16797380 REVERSE LENGTH=682
          Length = 682

 Score =  100 bits (249), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 12/168 (7%)

Query: 7   LDIVLHDILRVVTPLQEDWAIRFAIINDFRSIV-----ESVESLRGATVEPYGSFVSNLF 61
           LD VL+D+     P+  D+  R  ++ +  ++      +S ES     +E YGSFV +++
Sbjct: 43  LDKVLNDVYCSFRPVSADYNTRKELVKNLNTMALDIYGKSEES--SPVLEAYGSFVMDMY 100

Query: 62  TRWGDLDISIELSNGSHISSIGKNQKQRLLGDL---IKALKLKGGWINLQFISHARVPIL 118
           +   DLD+SI   NG+  S I + +K  +L      +++L+ +G   N++ I  A+VPI+
Sbjct: 101 SSQSDLDVSINFGNGT--SEIPREKKLEILKRFAKKLRSLQGEGQVKNVESIFSAKVPIV 158

Query: 119 KFKSRRQGVSCDISINNLQGVIKSKLLLSIDRIDGRFRDMVLVVKEWA 166
           KF  +  GV CD+S+ N  G++ S+++  I +IDGRF+ + L+VK WA
Sbjct: 159 KFSDQGTGVECDLSVENKDGILNSQIVRIISQIDGRFQKLCLLVKHWA 206


>AT3G45750.2 | Symbols:  | Nucleotidyltransferase family protein |
           chr3:16793855-16796913 REVERSE LENGTH=614
          Length = 614

 Score = 70.9 bits (172), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 33/139 (23%)

Query: 59  NLFTRWGDLDISIELSNGSHISSIGKNQKQRLLGDLIKALKLKGGWI------------- 105
           ++++   DLD+SI   NG+  S I + +K  +L    K L+   G I             
Sbjct: 2   DMYSSQSDLDVSINFGNGT--SEIPREKKLEILKRFAKKLRSLQGKIFVPFFLLLSCMPI 59

Query: 106 ------------------NLQFISHARVPILKFKSRRQGVSCDISINNLQGVIKSKLLLS 147
                             N++ I  A+VPI+KF  +  GV CD+S+ N  G++ S+++  
Sbjct: 60  PLLFSIYTKNPNREGQVKNVESIFSAKVPIVKFSDQGTGVECDLSVENKDGILNSQIVRI 119

Query: 148 IDRIDGRFRDMVLVVKEWA 166
           I +IDGRF+ + L+VK WA
Sbjct: 120 ISQIDGRFQKLCLLVKHWA 138


>AT3G45760.1 | Symbols:  | Nucleotidyltransferase family protein |
           chr3:16801996-16804759 REVERSE LENGTH=474
          Length = 474

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 87/155 (56%), Gaps = 12/155 (7%)

Query: 20  PLQEDWAIRFAIINDFRSIV-----ESVESLRGATVEPYGSFVSNLFTRWGDLDISIELS 74
           P+  D+  R  ++ +  ++      +S ES     +E YGSF  N F+   DLD+SI  S
Sbjct: 56  PVSADYNTRKELVKNLNAMAIDIFGKSEES--SPVLEAYGSFAMNTFSSQKDLDVSINFS 113

Query: 75  NGSHISSIGKNQKQRLL---GDLIKALKLKGGWINLQFISHARVPILKFKSRRQGVSCDI 131
           +G+  S   + +K  +L      +++L+ +G   N+  I  ARVPI++F  +  G+ CD+
Sbjct: 114 SGT--SEFYREKKLEILTRFATKLRSLEGQGFVRNVVPILSARVPIVRFCDQGTGIECDL 171

Query: 132 SINNLQGVIKSKLLLSIDRIDGRFRDMVLVVKEWA 166
           ++ +  G++ S+++  I +ID RF+ + L++K WA
Sbjct: 172 TVESKDGILTSQIIRIISQIDDRFQKLCLLIKHWA 206


>AT2G45620.1 | Symbols:  | Nucleotidyltransferase family protein |
           chr2:18792943-18795750 FORWARD LENGTH=764
          Length = 764

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 8/114 (7%)

Query: 53  YGSFVSNLFTRWGDLDISIELSNGSHISSIGKNQKQRLLGDLIKALKLKGGWINLQFISH 112
           YGS  ++      D+D+ + +        I K++    L +++++  L+    N+Q ++ 
Sbjct: 478 YGSCANSFGFPKSDIDVCLAIEG----DDINKSEMLLKLAEILESDNLQ----NVQALTR 529

Query: 113 ARVPILKFKSRRQGVSCDISINNLQGVIKSKLLLSIDRIDGRFRDMVLVVKEWA 166
           ARVPI+K      G+SCDI INN+  V+ +KLL    +ID R R +  +VK WA
Sbjct: 530 ARVPIVKLMDPVTGISCDICINNVLAVVNTKLLRDYAQIDVRLRQLAFIVKHWA 583


>AT3G45760.2 | Symbols:  | Nucleotidyltransferase family protein |
           chr3:16802253-16804759 REVERSE LENGTH=447
          Length = 447

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 83/150 (55%), Gaps = 12/150 (8%)

Query: 20  PLQEDWAIRFAIINDFRSIV-----ESVESLRGATVEPYGSFVSNLFTRWGDLDISIELS 74
           P+  D+  R  ++ +  ++      +S ES     +E YGSF  N F+   DLD+SI  S
Sbjct: 56  PVSADYNTRKELVKNLNAMAIDIFGKSEES--SPVLEAYGSFAMNTFSSQKDLDVSINFS 113

Query: 75  NGSHISSIGKNQKQRLLGDL---IKALKLKGGWINLQFISHARVPILKFKSRRQGVSCDI 131
           +G+  S   + +K  +L      +++L+ +G   N+  I  ARVPI++F  +  G+ CD+
Sbjct: 114 SGT--SEFYREKKLEILTRFATKLRSLEGQGFVRNVVPILSARVPIVRFCDQGTGIECDL 171

Query: 132 SINNLQGVIKSKLLLSIDRIDGRFRDMVLV 161
           ++ +  G++ S+++  I +ID RF+ + L+
Sbjct: 172 TVESKDGILTSQIIRIISQIDDRFQKLCLL 201


>AT5G53770.1 | Symbols:  | Nucleotidyltransferase family protein |
           chr5:21826733-21829858 FORWARD LENGTH=530
          Length = 530

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 10/126 (7%)

Query: 13  DILRVVTPLQEDWAIRFAIINDFRSIVESVESLRGATVEPYGSFVSNLFTRWGDLDISIE 72
           D    + P Q + A R A +    S+++ +       VE +GS+ + L+    D+D+ I 
Sbjct: 127 DFCDFLLPTQAEKAERDAAVESVSSVIKYIWP--SCKVEVFGSYKTGLYLPTSDIDVVIL 184

Query: 73  LSNGSHISSIGKNQKQRLLGDLIKALKLKGGWINLQFISHARVPILKFKSRRQGVSCDIS 132
            S        G    Q  L  L +AL  +G   NL  I+ ARVPI+KF  ++  ++ D+S
Sbjct: 185 ES--------GLTNPQLGLRALSRALSQRGIAKNLLVIAKARVPIIKFVEKKSNIAFDLS 236

Query: 133 INNLQG 138
            +   G
Sbjct: 237 FDMENG 242