Miyakogusa Predicted Gene
- Lj0g3v0084789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0084789.1 Non Chatacterized Hit- tr|I1L9W3|I1L9W3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,74.49,0,seg,NULL;
PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide repeat; no
description,Tetratricopep,CUFF.4459.1
(737 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 735 0.0
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 6e-95
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 345 8e-95
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 1e-94
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 3e-94
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 336 4e-92
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 1e-91
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 331 9e-91
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 1e-90
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 4e-90
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 8e-89
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 4e-88
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 322 6e-88
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 318 6e-87
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 6e-87
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 314 1e-85
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 9e-85
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 4e-84
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 307 2e-83
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 6e-83
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 8e-83
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 297 2e-80
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 9e-80
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 1e-79
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 4e-79
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 1e-78
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 3e-78
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 5e-78
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 1e-76
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 4e-76
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 5e-76
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 280 2e-75
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 4e-73
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 272 5e-73
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 272 7e-73
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 7e-73
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 268 8e-72
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 4e-70
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 4e-70
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 2e-69
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 3e-69
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 259 4e-69
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 4e-69
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 4e-68
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 9e-68
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 1e-67
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 254 1e-67
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 254 1e-67
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 9e-67
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 249 5e-66
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 7e-66
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 247 2e-65
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 246 3e-65
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 246 3e-65
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 8e-65
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 8e-65
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 1e-64
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 5e-64
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 2e-63
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 240 3e-63
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 3e-63
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 238 1e-62
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 2e-62
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 237 2e-62
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 236 5e-62
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 9e-62
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 2e-61
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 234 2e-61
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 7e-61
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 231 2e-60
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 7e-60
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 228 9e-60
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 223 3e-58
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 5e-58
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 8e-58
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 7e-57
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 219 7e-57
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 8e-57
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 218 2e-56
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 5e-56
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 1e-55
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 8e-55
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 2e-54
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 210 3e-54
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 208 1e-53
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 1e-53
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 207 2e-53
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 7e-53
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 9e-53
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 9e-53
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 3e-52
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 7e-51
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 1e-49
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 2e-48
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 1e-47
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 6e-47
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 185 1e-46
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 184 2e-46
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 4e-46
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 7e-46
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 9e-44
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 3e-42
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 3e-41
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 6e-41
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 1e-40
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 6e-40
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 5e-25
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 6e-25
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 106 5e-23
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 3e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 98 2e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 95 2e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 8e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 8e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 92 1e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 91 3e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-18
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 5e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 87 4e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 5e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 86 1e-16
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 86 1e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 9e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 1e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 77 3e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 6e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 6e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 73 8e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 8e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 8e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 69 1e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 2e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 66 8e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 66 9e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 64 3e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 64 5e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 63 6e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 7e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 61 3e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 56 9e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 56 9e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 54 4e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 4e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/739 (49%), Positives = 503/739 (68%), Gaps = 11/739 (1%)
Query: 2 KKCWFSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLST 61
K + +S +S +L LN L LTRS ++ +LKLF +H TLRPD Y++S
Sbjct: 3 KALCLTESLSAIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSL 62
Query: 62 AITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEI 121
AIT + + R T FG Q+H +AIR+GL HSHV+N+LLSLY + +LAS+++ F EI
Sbjct: 63 AITTARHLRD----TIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEI 118
Query: 122 EYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDL 181
+ PD YSWTT+LSAS +LG + A ++FD+MP R +VA+WNA+IT C ++G+ + + +L
Sbjct: 119 DEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGC-KESGYHETSVEL 177
Query: 182 FRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNC 241
FR+M K+GVR D + F ++LS+C LDFG+ VHS+VI++GF +SVVN+LITMYFNC
Sbjct: 178 FREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNC 237
Query: 242 GCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
VVDA VF E + +RD VT+N +IDGL R+E + ++FR M +A P + TFVS
Sbjct: 238 QVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDE-SLLVFRKMLEASLRPTDLTFVS 296
Query: 302 VMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS 361
VM SCS +G Q +IKTG++ YT V+NATMTMYS F A +FE +EE+DLV+
Sbjct: 297 VMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIG 421
WN MIS + Q L ++A+ Y +M +G++PDEFT+GSLL S L V+EMV + + K G
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFG 416
Query: 422 LM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFS 480
L K+E+ N+LI+AY +NG+I A +F K+LISWN IISGF NG P +GLE+FS
Sbjct: 417 LSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFS 476
Query: 481 ALLNTPLK--PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK 538
LL + ++ P+AY G Q H Y+LRHG E +GNAL+ MY++
Sbjct: 477 CLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQ 536
Query: 539 CGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTI 598
CG++ SL VFN M ++D +SWN+LISAY++HG+G+ AV ++ MQ + PD ATF+
Sbjct: 537 CGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSA 596
Query: 599 VLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK--GGY 656
VLSACSH GLV++G IF+ MV +G + +VDHFSC+VDLLGR+G+L+EAE L+K
Sbjct: 597 VLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKT 656
Query: 657 FGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAAN 716
G+ ++ W+LFSACAAHG+L+LG+MVA+LL+EK+ ++PSVYV LSNI A AG W+EA
Sbjct: 657 IGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEE 716
Query: 717 LRDMMREFGTTKQPGCSWI 735
R + G KQ GCSW+
Sbjct: 717 TRRAINMIGAMKQRGCSWM 735
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 230/732 (31%), Positives = 367/732 (50%), Gaps = 53/732 (7%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+SS ++ N +++ + T +++ F + S +++ TL + ++A
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS-SVKSTRSTLGSVLSAIG----IVA 341
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G +HA AI+ GL ++ +V +SL+S+Y+K E + + + F +E +D
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND-------- 393
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
WNA+I R A NG +LF DM+ G D
Sbjct: 394 ------------------------VFWNAMI-RGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 195 YTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
+TFTS+LS C+ L+ G HS++I+ V N+L+ MY CG + DA Q+F
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLR 310
+ RD+VT+N +I V+ + +AF +F+ M A S + +C+ L
Sbjct: 489 MCD--RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLY 546
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFF 370
G Q S+K G D ++ + MYS G + +A+ +F + E +VS N +I+ +
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS 606
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGLM-KVE 426
Q NL E +L + +M G+ P E T+ +++ A +SL + H ++K G + E
Sbjct: 607 QNNLEEAVVL-FQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 427 VLN-SLIAAYCRNGRINWALQIFSNLPY-KSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
L SL+ Y + + A +FS L KS++ W ++SG NG + L+ + + +
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
+ P+ G+ +H I + N L+ MYAKCG + G
Sbjct: 726 DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 545 SLGVFNAMVKR-DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
S VF+ M +R + +SWN+LI+ YA++G ++A+ F++M+ S I PD TF VL+AC
Sbjct: 786 SSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH-IMPDEITFLGVLTAC 844
Query: 604 SHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNI 663
SH G V DG +IF+MM+ YG VDH +C+VDLLGR GYL+EA+ I+ ++ +
Sbjct: 845 SHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARL 904
Query: 664 CWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
SL AC HG+ G + A L+E + N S YVLLSNI A+ G WE+A LR +MR+
Sbjct: 905 WSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRD 964
Query: 724 FGTTKQPGCSWI 735
G K PG SWI
Sbjct: 965 RGVKKVPGYSWI 976
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 184/678 (27%), Positives = 314/678 (46%), Gaps = 62/678 (9%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N +L+ + + + L+ F + + P+ +T S ++ A T FG Q+H
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIF-PNKFTFSIVLSTCARE----TNVEFGRQIH 183
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWT------------- 130
I+ GL+ +S+ +L+ +YAK + ++ R F I P+ WT
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 131 ----------------------TMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRC 168
T+++ RLG + DA LF +M + +V WN +I+
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-PDVVAWNVMISGH 302
Query: 169 GADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLAR 227
G G + VA + F +M+K V+ T S+LS V LD G VH+ I+ G +
Sbjct: 303 GK-RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 228 TSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
V +SL++MY C + A +VF +E ++ V +NAMI G + +F DM
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEE--KNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 288 QKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKV 344
+ + ++ + TF S++S+C++ L +G Q + IK V NA + MY+ G +
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 345 NEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS 404
+A+ IFERM +RD V+WN +I + Q+ A + +M GI D S L A
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 405 DSLQVV---EMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWN 460
+ + + VH L K GL + + +SLI Y + G I A ++FS+LP S++S N
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 461 TIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
+I+G+ N + + F +L + P+ G Q HG I +
Sbjct: 600 ALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR 658
Query: 521 GFSSEIS-LGNALVTMYAKCGSLDGSLGVFNAMVKRDTIS-WNALISAYAQHGQGKEAVC 578
GFSSE LG +L+ MY + + +F+ + +I W ++S ++Q+G +EA+
Sbjct: 659 GFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALK 718
Query: 579 CFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPS------VDHF 632
++ M+ G+ PD ATF VL CS + + +G I ++ ++ + +D +
Sbjct: 719 FYKEMR-HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 777
Query: 633 SCIVDLLGRSGYLEEAER 650
+ D+ G S +E R
Sbjct: 778 AKCGDMKGSSQVFDEMRR 795
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/584 (24%), Positives = 262/584 (44%), Gaps = 75/584 (12%)
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
A A G +H+ ++ G+ + + N+++ LYAK ++ E+ F +E D +W +M
Sbjct: 73 ALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSM 131
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
LS + +G G L+ F LF + + P
Sbjct: 132 LSMYSSIGKPGKVLRSF-----------------------------VSLFENQ----IFP 158
Query: 193 DGYTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
+ +TF+ +LS C+ E ++FGR +H +I+ G + +L+ MY C + DA +VF
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV 311
+ + V + + G V+ E+A ++F M+ P FV+V+++
Sbjct: 219 EWIVDP--NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT------ 270
Query: 312 GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQ 371
Y GK+ +A+ +F M D+V+WN+MIS +
Sbjct: 271 --------------------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGK 304
Query: 372 ENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIGLM-KVEV 427
AI + MR+ ++ T GS+L G +L + +VH+ K+GL + V
Sbjct: 305 RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYV 364
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
+SL++ Y + ++ A ++F L K+ + WN +I G+ NG + +E F + ++
Sbjct: 365 GSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGY 424
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
+ + G Q H I++ + + +GNALV MYAKCG+L+ +
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQ 484
Query: 548 VFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG 607
+F M RD ++WN +I +Y Q EA F+ M + GI D A L AC+HV
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC-GIVSDGACLASTLKACTHVH 543
Query: 608 LVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
+ G ++ + V G + S ++D+ + G +++A ++
Sbjct: 544 GLYQGKQVHCLSVKC-GLDRDLHTGSSLIDMYSKCGIIKDARKV 586
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 345 bits (884), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 230/737 (31%), Positives = 380/737 (51%), Gaps = 70/737 (9%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
LL + RSN E++ + + ++PD+Y + A A+ + G Q+HAH
Sbjct: 68 LLRSKVRSNLLREAVLTYVDM-IVLGIKPDNYAFPALLKAVADLQD----MELGKQIHAH 122
Query: 86 AIRTGLKAHS-HVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGD 144
+ G S VAN+L++LY K D +V
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCGDFGAV------------------------------ 152
Query: 145 ALKLFDQMPNRSNVAVWNAIITR-CGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
K+FD++ R+ V+ WN++I+ C + ++A + FR M V P +T S+++
Sbjct: 153 -YKVFDRISERNQVS-WNSLISSLCSFEKW--EMALEAFRCMLDENVEPSSFTLVSVVTA 208
Query: 204 CS----VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLR 259
CS E L G+ VH+ +R G L + ++N+L+ MY G + + + G G R
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSF--GGR 265
Query: 260 DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQ 316
D VT+N ++ L + ++ +A R+M P E T SV+ +CS L R G +
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 317 AQSIKTG-FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
A ++K G D + V +A + MY +V + +F+ M +R + WN MI+ + Q +
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 376 ETAILTYLKMRR-VGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGLMKVE-VLNS 430
+ A+L ++ M G+ + T ++ A S + E +H + K GL + V N+
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 431 LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGC---------PLQGLEQ--F 479
L+ Y R G+I+ A++IF + + L++WNT+I+G++ + +Q LE+
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 480 SALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKC 539
LKPN+ GK++H Y +++ ++++++G+ALV MYAKC
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 540 GSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIV 599
G L S VF+ + +++ I+WN +I AY HG G+EA+ M + G++P+ TF V
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ-GVKPNEVTFISV 624
Query: 600 LSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGA 659
+ACSH G+VD+G RIF +M YG PS DH++C+VDLLGR+G ++EA +L+
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF 684
Query: 660 NSNICW-SLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLR 718
N W SL A H NL +G + A+ L++ + N S YVLL+NI ++AG W++A +R
Sbjct: 685 NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVR 744
Query: 719 DMMREFGTTKQPGCSWI 735
M+E G K+PGCSWI
Sbjct: 745 RNMKEQGVRKEPGCSWI 761
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 160/632 (25%), Positives = 291/632 (46%), Gaps = 78/632 (12%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
IS + N L+++L + +L+ F + + P +TL + +TA +N P
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNL-PMPE 216
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G Q+HA+ +R G + +S + N+L+++Y K LAS + D +W T+LS
Sbjct: 217 GLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+ + + +AL + R+M GV PD
Sbjct: 276 SLCQNEQLLEAL---------------------------------EYLREMVLEGVEPDE 302
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNS-LITMYFNCGCVVDAYQVFG 252
+T +S+L CS +E+L G+ +H+ +++G L S V S L+ MY NC V+ +VF
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 253 EVEAGLRDHVT--YNAMIDGLVRVDRNEDAFVMFRDMQK-ACFSPMEATFVSVMSSCSSL 309
G+ D +NAMI G + + +++A ++F M++ A T V+ +C +
Sbjct: 363 ----GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC--V 416
Query: 310 RVGCQAQAQSI-----KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
R G ++ ++I K G D V N M MYS GK++ A IF +ME+RDLV+WN
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476
Query: 365 MISMFFQENLNETAILTYLKMR-----------RVGIEPDEFTYGSLLGASDSLQVV--- 410
MI+ + +E A+L KM+ RV ++P+ T ++L + +L +
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 411 EMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
+ +H+ K L V V ++L+ Y + G + + ++F +P K++I+WN II + +
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG 529
G + ++ ++ +KPN G ++ Y+++ + E S
Sbjct: 597 GNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSD 655
Query: 530 N--ALVTMYAKCGSLDGSLGVFNAMVKRD---TISWNALISAYAQHGQGKEAVCCFEAMQ 584
+ +V + + G + + + N M+ RD +W++L+ A H + A Q
Sbjct: 656 HYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSLLGASRIHNNLEIGEI---AAQ 711
Query: 585 ISPGIEPDHATFTIVLSAC-SHVGLVDDGTRI 615
+EP+ A+ ++L+ S GL D T +
Sbjct: 712 NLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 217/480 (45%), Gaps = 41/480 (8%)
Query: 192 PDGYTFT--SMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ 249
P +TF+ S+ S +LL F RH H ++R+ + T V S ++ A
Sbjct: 4 PLAFTFSLPSIFPFPS-QLLPFSRHKHPYLLRATPTSATEDVASAVS---------GAPS 53
Query: 250 VFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
+F R + ++ VR + +A + + DM P F +++ + + L
Sbjct: 54 IFISQS---RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADL 110
Query: 310 R---VGCQAQAQSIKTGF--DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
+ +G Q A K G+ D+ T V N + +Y G +F+R+ ER+ VSWN
Sbjct: 111 QDMELGKQIHAHVYKFGYGVDSVT-VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 169
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE--MVHSLLSKIGL 422
+IS E A+ + M +EP FT S++ A +L + E M+ + GL
Sbjct: 170 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL 229
Query: 423 MKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQ 478
K E ++N+L+A Y + G++ + + + + L++WNT++S N L+ LE
Sbjct: 230 RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEIS-LGNALVTMYA 537
++ ++P+ + GK++H Y L++G E S +G+ALV MY
Sbjct: 290 LREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 349
Query: 538 KCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFT 597
C + VF+ M R WNA+I+ Y+Q+ KEA+ F M+ S G+ + T
Sbjct: 350 NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMA 409
Query: 598 IVLSACSHVGLVDDGTRIFDMMVNIYGFVPS----VDHF--SCIVDLLGRSGYLEEAERL 651
V+ AC G F I+GFV D F + ++D+ R G ++ A R+
Sbjct: 410 GVVPACVRSG-------AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 213/619 (34%), Positives = 310/619 (50%), Gaps = 77/619 (12%)
Query: 193 DGYTFTSMLSLCSVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
D F +L C L + R+VH+ VI+SGF + N LI Y CG + D QV
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 251 FGE-----------VEAGL------------------RDHVTYNAMIDGLVRVDRNEDAF 281
F + V GL RD T+N+M+ G + DR E+A
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 282 VMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMY 338
F M K F E +F SV+S+CS L G Q + K+ F + + +A + MY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 339 SCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYG 398
S G VN+AQ +F+ M +R++VSWN +I+ F Q A+ + M +EPDE T
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 399 SLLGASDSLQVVEM---VHSLLSKIGLMKVEVL--NSLIAAYCRNGRINWALQIFSNLPY 453
S++ A SL +++ VH + K ++ +++ N+ + Y + RI A IF ++P
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 454 KSLI-------------------------------SWNTIISGFLTNGCPLQGLEQFSAL 482
+++I SWN +I+G+ NG + L F L
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 483 LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFS------SEISLGNALVTMY 536
+ P Y G Q H ++L+HGF +I +GN+L+ MY
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 537 AKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATF 596
KCG ++ VF M++RD +SWNA+I +AQ+G G EA+ F M + G +PDH T
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM-LESGEKPDHITM 496
Query: 597 TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGY 656
VLSAC H G V++G F M +G P DH++C+VDLLGR+G+LEEA+ +I+
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 657 FGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAAN 716
+S I SL +AC H N+ LG+ VA LLE + +N YVLLSN+ A G+WE+ N
Sbjct: 557 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616
Query: 717 LRDMMREFGTTKQPGCSWI 735
+R MR+ G TKQPGCSWI
Sbjct: 617 VRKSMRKEGVTKQPGCSWI 635
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 137/537 (25%), Positives = 248/537 (46%), Gaps = 52/537 (9%)
Query: 82 LHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGH 141
+HA I++G + N L+ Y+K L + F ++ + Y+W ++++ T+LG
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 142 VGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML 201
+ +A LF MP R WN++++ A + + A F M K G + Y+F S+L
Sbjct: 102 LDEADSLFRSMPERDQ-CTWNSMVSGF-AQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 202 SLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRD 260
S CS + ++ G VHS++ +S FL+ + ++L+ MY CG V DA +VF E+ G R+
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM--GDRN 217
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQA 317
V++N++I + +A +F+ M ++ P E T SV+S+C+SL +VG +
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 318 QSIKTG-FDAYTAVNNATMTMYSCFGKVNEAQNIFE------------------------ 352
+ +K ++NA + MY+ ++ EA+ IF+
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 353 -------RMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASD 405
+M ER++VSWN +I+ + Q NE A+ + ++R + P +++ ++L A
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 406 SLQVVEM-----VHSLLSKIGLMKVE-----VLNSLIAAYCRNGRINWALQIFSNLPYKS 455
L + + VH L E V NSLI Y + G + +F + +
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 456 LISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHG 515
+SWN +I GF NG + LE F +L + KP+ G+
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 516 YILRH-GFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQH 570
+ R G + +V + + G L+ + + M ++ D++ W +L++A H
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 211/718 (29%), Positives = 355/718 (49%), Gaps = 49/718 (6%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
+++ L+++ E+++LF ++ + P Y S+ ++A + G QLH
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIM-PTPYAFSSVLSACKKIE----SLEIGEQLHGL 313
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
++ G + ++V N+L+SLY +L S E F+ + D ++ T+++ ++ G+ A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
++LF +M H D G+ PD T S++ CS
Sbjct: 374 MELFKRM---------------------HLD------------GLEPDSNTLASLVVACS 400
Query: 206 VELLDF-GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTY 264
+ F G+ +H+ + GF + + +L+ +Y C + A F E E + + V +
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE--VENVVLW 458
Query: 265 NAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIK 321
N M+ +D ++F +FR MQ P + T+ S++ +C L +G Q +Q IK
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 322 TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILT 381
T F V + + MY+ GK++ A +I R +D+VSW MI+ + Q N ++ A+ T
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 382 YLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGL-MKVEVLNSLIAAYCR 437
+ +M GI DE + + A LQ + + +H+ G + N+L+ Y R
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSR 638
Query: 438 NGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXX 497
G+I + F I+WN ++SGF +G + L F + + N +
Sbjct: 639 CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 698
Query: 498 XXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDT 557
GKQVH I + G+ SE + NAL++MYAKCGS+ + F + ++
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758
Query: 558 ISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFD 617
+SWNA+I+AY++HG G EA+ F+ M I + P+H T VLSACSH+GLVD G F+
Sbjct: 759 VSWNAIINAYSKHGFGSEALDSFDQM-IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 817
Query: 618 MMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNL 677
M + YG P +H+ C+VD+L R+G L A+ I+ ++ + +L SAC H N+
Sbjct: 818 SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 877
Query: 678 RLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+G A LLE + + + YVLLSN+ A + +W+ R M+E G K+PG SWI
Sbjct: 878 EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 165/639 (25%), Positives = 291/639 (45%), Gaps = 49/639 (7%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFG 79
I N ++ L N E LF ++ S + P+ T S + A R + A
Sbjct: 151 IFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEA---CRGGSVAFDVV 206
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRL 139
Q+HA + GL+ + V N L+ LY++ + R F + D SW M+S ++
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK- 265
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTS 199
C A+ A LF DM +G+ P Y F+S
Sbjct: 266 --------------------------NECEAE------AIRLFCDMYVLGIMPTPYAFSS 293
Query: 200 MLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
+LS C +E L+ G +H +V++ GF + T V N+L+++YF+ G ++ A +F +
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ-- 351
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQA 315
RD VTYN +I+GL + E A +F+ M P T S++ +CS +L G Q
Sbjct: 352 RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
A + K GF + + A + +Y+ + A + F E ++V WN+M+ + +
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGL-MKVEVLNSL 431
+ + +M+ I P+++TY S+L L++ E +HS + K + V + L
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531
Query: 432 IAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
I Y + G+++ A I K ++SW T+I+G+ + L F +L+ ++ +
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 591
Query: 492 YXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNA 551
G+Q+H GFSS++ NALVT+Y++CG ++ S F
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 552 MVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDD 611
D I+WNAL+S + Q G +EA+ F M GI+ ++ TF + A S +
Sbjct: 652 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN-REGIDNNNFTFGSAVKAASETANMKQ 710
Query: 612 GTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAER 650
G ++ ++ G+ + + ++ + + G + +AE+
Sbjct: 711 GKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEK 748
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 181/681 (26%), Positives = 295/681 (43%), Gaps = 65/681 (9%)
Query: 52 LRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDL 111
+RP+H TL + T + G +LH+ ++ GL ++ ++ L Y DL
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDE---GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 112 ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD 171
A K+FD+MP R+ + WN +I +
Sbjct: 137 YG-------------------------------AFKVFDEMPERT-IFTWNKMIKELASR 164
Query: 172 NGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC---SVELLDFGRHVHSVVIRSGFLART 228
N +V F LF M V P+ TF+ +L C SV D +H+ ++ G T
Sbjct: 165 NLIGEV-FGLFVRMVSENVTPNEGTFSGVLEACRGGSVA-FDVVEQIHARILYQGLRDST 222
Query: 229 SVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQ 288
V N LI +Y G V A +VF + L+DH ++ AMI GL + + +A +F DM
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLR--LKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 289 KACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVN 345
P F SV+S+C SL +G Q +K GF + T V NA +++Y G +
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 346 EAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL---G 402
A++IF M +RD V++N +I+ Q E A+ + +M G+EPD T SL+
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 403 ASDSLQVVEMVHSLLSKIGLM---KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISW 459
A +L + +H+ +K+G K+E +L+ Y + I AL F ++++ W
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 460 NTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR 519
N ++ + F + + PN Y G+Q+H I++
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 520 HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCC 579
F + + L+ MYAK G LD + + +D +SW +I+ Y Q+ +A+
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 580 FEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLL 639
F M + GI D T +SAC+ + + +G +I + GF + + +V L
Sbjct: 579 FRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLY 636
Query: 640 GRSGYLEEAERLIKGGYFGANSNICW-SLFSACAAHGNLRLG-RMVARLLLEKDHNNPSV 697
R G +EE+ + A NI W +L S GN R+ R+ E NN
Sbjct: 637 SRCGKIEESYLAFEQT--EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN-- 692
Query: 698 YVLLSNICAAAGQWEEAANLR 718
+ S + AA+ E AN++
Sbjct: 693 FTFGSAVKAAS----ETANMK 709
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 226/489 (46%), Gaps = 18/489 (3%)
Query: 189 GVRPDGYTFTSMLSLC--SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
G+RP+ T +L C + LD GR +HS +++ G + + L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC 306
A++VF E+ R T+N MI L + + F +F M +P E TF V+ +C
Sbjct: 139 AFKVFDEMPE--RTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 307 S----SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSW 362
+ V Q A+ + G T V N + +YS G V+ A+ +F+ + +D SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 363 NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSK 419
MIS + AI + M +GI P + + S+L A +SL++ E +H L+ K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 420 IGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQ 478
+G V N+L++ Y G + A IFSN+ + +++NT+I+G G + +E
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK 538
F + L+P++ G+Q+H Y + GF+S + AL+ +YAK
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 539 CGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTI 598
C ++ +L F + + WN ++ AY + + F MQI I P+ T+
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE-IVPNQYTYPS 495
Query: 599 VLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA-ERLIKGGYF 657
+L C +G ++ G +I ++ F + S ++D+ + G L+ A + LI+ F
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDILIR---F 551
Query: 658 GANSNICWS 666
+ W+
Sbjct: 552 AGKDVVSWT 560
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 155/361 (42%), Gaps = 53/361 (14%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N L++ +S + E+L++F +++ + +++T +A+ A++ T G Q+H
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNR-EGIDNNNFTFGSAVKAASETANMKQ----GKQVH 715
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
A +TG + + V N+L+S+YAK ++ E+ F E+ ++ SW +++A ++ G
Sbjct: 716 AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGS 775
Query: 144 DALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK---IGVRPDGYTF 197
+AL FDQM + R N +++ C + G D F M + +P+ Y
Sbjct: 776 EALDSFDQMIHSNVRPNHVTLVGVLSAC-SHIGLVDKGIAYFESMNSEYGLSPKPEHY-- 832
Query: 198 TSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVV--------NSLITMYFNCGCVVDAYQ 249
+C V++L R+G L+R ++L+ CVV
Sbjct: 833 -----VCVVDML----------TRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 877
Query: 250 VFGE------VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEA--TFVS 301
GE +E D TY ++ L V + DA + R K E +++
Sbjct: 878 EIGEFAAHHLLELEPEDSATY-VLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Query: 302 VMSSCSSLRVGCQAQ--AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL 359
V +S S VG Q A I F T + + CF +NE Q+ E++D
Sbjct: 937 VKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQH-----EQKDP 991
Query: 360 V 360
+
Sbjct: 992 I 992
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 340 bits (873), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 221/717 (30%), Positives = 354/717 (49%), Gaps = 49/717 (6%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
LL +R + E+ +LF IH + D S+ + SA FG QLH
Sbjct: 64 LLFGFSRDGRTQEAKRLFLNIHR-LGMEMDCSIFSSVLKVSATL----CDELFGRQLHCQ 118
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
I+ G V SL+ Y K + D
Sbjct: 119 CIKFGFLDDVSVGTSLVDTYMKGSNFK-------------------------------DG 147
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
K+FD+M R NV W +I+ A N +D LF MQ G +P+ +TF + L + +
Sbjct: 148 RKVFDEMKER-NVVTWTTLISGY-ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLA 205
Query: 206 VELLD-FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTY 264
E + G VH+VV+++G V NSLI +Y CG V A +F + E ++ VT+
Sbjct: 206 EEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE--VKSVVTW 263
Query: 265 NAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIK 321
N+MI G + +A MF M+ E++F SV+ C++L R Q +K
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK 323
Query: 322 TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME-ERDLVSWNIMISMFFQENLNETAIL 380
GF + A M YS + +A +F+ + ++VSW MIS F Q + E A+
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383
Query: 381 TYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNS-LIAAYCRNG 439
+ +M+R G+ P+EFTY +L A + E VH+ + K + + + L+ AY + G
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLG 442
Query: 440 RINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
++ A ++FS + K +++W+ +++G+ G ++ F L +KPN +
Sbjct: 443 KVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 500 X-XXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTI 558
GKQ HG+ ++ S + + +AL+TMYAK G+++ + VF ++D +
Sbjct: 503 VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV 562
Query: 559 SWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDM 618
SWN++IS YAQHGQ +A+ F+ M+ ++ D TF V +AC+H GLV++G + FD+
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMK-KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Query: 619 MVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLR 678
MV P+ +H SC+VDL R+G LE+A ++I+ A S I ++ +AC H
Sbjct: 622 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTE 681
Query: 679 LGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
LGR+ A ++ + + YVLLSN+ A +G W+E A +R +M E K+PG SWI
Sbjct: 682 LGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/590 (24%), Positives = 269/590 (45%), Gaps = 24/590 (4%)
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
+A LFD+ P R + + + + +G A LF ++ ++G+ D F+S+L +
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGF--SRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 204 CSVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH 261
S L D FGR +H I+ GFL SV SL+ Y D +VF E++ R+
Sbjct: 103 -SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE--RNV 159
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQAQ 318
VT+ +I G R N++ +F MQ P TF + + + V G Q
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 319 SIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETA 378
+K G D V+N+ + +Y G V +A+ +F++ E + +V+WN MIS + L+ A
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 379 ILTYLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIG-LMKVEVLNSLIAA 434
+ + MR + E ++ S++ L+ E +H + K G L + +L+ A
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 435 YCRNGRINWALQIFSNLP-YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYX 493
Y + + AL++F + +++SW +ISGFL N + ++ FS + ++PN +
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 494 XXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMV 553
+VH +++ + ++G AL+ Y K G ++ + VF+ +
Sbjct: 400 YSVILTALPVISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Query: 554 KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT 613
+D ++W+A+++ YAQ G+ + A+ F + GI+P+ TF+ +L+ C+
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMGQG 514
Query: 614 RIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SLFSACA 672
+ F S+ S ++ + + G +E AE + K + W S+ S A
Sbjct: 515 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR--EKDLVSWNSMISGYA 572
Query: 673 AHGN-LRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMM 721
HG ++ + + K + ++ + C AG EE D+M
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 141/298 (47%), Gaps = 12/298 (4%)
Query: 318 QSIKTGFDAYTAVNNATMTMYSCFGKVNE-----AQNIFERMEERDLVSWNIMISMFFQE 372
++ K F Y N CFG V+ A N+F++ RD S+ ++ F ++
Sbjct: 14 ENFKPKFRIYA--NGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRD 71
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL---QVVEMVHSLLSKIGLM-KVEVL 428
+ A +L + R+G+E D + S+L S +L +H K G + V V
Sbjct: 72 GRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVG 131
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
SL+ Y + ++F + +++++W T+ISG+ N + L F + N +
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
PN++ G QVH ++++G I + N+L+ +Y KCG++ + +
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 549 FNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
F+ + ++WN++IS YA +G EA+ F +M+++ + ++F V+ C+++
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY-VRLSESSFASVIKLCANL 308
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 47/246 (19%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I + I+ + +LA ++ + ++K+F ++ + ++P+ +T S+ + A T +
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMG 512
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G Q H AI++ L + V+++LL++YAK ++ S E F D SW +M+S
Sbjct: 513 Q---GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+ G AL D+F++M+K V+ DG
Sbjct: 570 GYAQHGQAMKAL---------------------------------DVFKEMKKRKVKMDG 596
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
TF + + C+ L++ G +++R +A T NS C+VD Y G+
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNS---------CMVDLYSRAGQ 647
Query: 254 VEAGLR 259
+E ++
Sbjct: 648 LEKAMK 653
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 336 bits (861), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 215/612 (35%), Positives = 319/612 (52%), Gaps = 17/612 (2%)
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG-VR 191
L+ R G++ DA +F +M R N+ WN ++ A G+ D A L+ M +G V+
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSER-NLFSWNVLVGGY-AKQGYFDEAMCLYHRMLWVGGVK 193
Query: 192 PDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
PD YTF +L C + L G+ VH V+R G+ VVN+LITMY CG V A +
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL- 309
F + RD +++NAMI G + +F M+ P T SV+S+C L
Sbjct: 254 FDRMPR--RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 310 --RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMIS 367
R+G A I TGF +V N+ MY G EA+ +F RME +D+VSW MIS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 368 MFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGLMK 424
+ L + AI TY M + ++PDE T ++L A +L ++ +H L K L+
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 425 -VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALL 483
V V N+LI Y + I+ AL IF N+P K++ISW +II+G N + L F +
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQM 490
Query: 484 NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLD 543
L+PNA GK++H ++LR G + L NAL+ MY +CG ++
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 544 GSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
+ FN+ K+D SWN L++ Y++ GQG V F+ M + + PD TF +L C
Sbjct: 551 TAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRM-VKSRVRPDEITFISLLCGC 608
Query: 604 SHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNI 663
S +V G F M + YG P++ H++C+VDLLGR+G L+EA + I+ + +
Sbjct: 609 SKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 664 CWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
+L +AC H + LG + A+ + E D + Y+LL N+ A G+W E A +R MM+E
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 724 FGTTKQPGCSWI 735
G T GCSW+
Sbjct: 728 NGLTVDAGCSWV 739
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 238/494 (48%), Gaps = 30/494 (6%)
Query: 172 NGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELL-DFGRHVHSVVIRSGFLARTSV 230
NG + A L MQ++ V D F +++ LC + + G V+S+ + S +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 231 VNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMF-RDMQK 289
N+ + M+ G +VDA+ VFG++ R+ ++N ++ G + ++A ++ R +
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSE--RNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWV 189
Query: 290 ACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNE 346
P TF V+ +C L G + ++ G++ V NA +TMY G V
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249
Query: 347 AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS 406
A+ +F+RM RD++SWN MIS +F+ + + + MR + ++PD T S++ A +
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 407 L---QVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTI 462
L ++ +H+ + G + + V NSL Y G A ++FS + K ++SW T+
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
ISG+ N P + ++ + + +KP+ G ++H ++
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEA 582
S + + N L+ MY+KC +D +L +F+ + +++ ISW ++I+ + + CFEA
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNR------CFEA 483
Query: 583 M----QISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM----VNIYGFVPSVDHFSC 634
+ Q+ ++P+ T T L+AC+ +G + G I + V + F+P+
Sbjct: 484 LIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA----- 538
Query: 635 IVDLLGRSGYLEEA 648
++D+ R G + A
Sbjct: 539 LLDMYVRCGRMNTA 552
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 181/362 (50%), Gaps = 9/362 (2%)
Query: 268 IDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGF 324
+ GL + E+A + MQ+ + E FV+++ C R G + + ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 325 DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLK 384
+ NA + M+ FG + +A +F +M ER+L SWN+++ + ++ + A+ Y +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 385 MRRV-GIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNG 439
M V G++PD +T+ +L G L + VH + + G + ++V+N+LI Y + G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 440 RINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
+ A +F +P + +ISWN +ISG+ NG +GLE F A+ + P+
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 500 XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTIS 559
G+ +H Y++ GF+ +IS+ N+L MY GS + +F+ M ++D +S
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 560 WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
W +IS Y + +A+ + M ++PD T VLSAC+ +G +D G + +
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMD-QDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 620 VN 621
+
Sbjct: 425 IK 426
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 137/567 (24%), Positives = 240/567 (42%), Gaps = 54/567 (9%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+S + N L+ + E++ L+ ++ ++PD YT + A
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G ++H H +R G + V N+L+++Y K D+ S F + D SW M+S
Sbjct: 215 ----GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+NG +LF M+ + V PD
Sbjct: 271 GYF---------------------------------ENGMCHEGLELFFAMRGLSVDPDL 297
Query: 195 YTFTSMLSLCSVELLD---FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
T TS++S C ELL GR +H+ VI +GF SV NSL MY N G +A ++F
Sbjct: 298 MTLTSVISAC--ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS--- 308
+E +D V++ MI G + A +R M + P E T +V+S+C++
Sbjct: 356 SRMER--KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD 413
Query: 309 LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISM 368
L G + +IK +Y V N + MYS +++A +IF + ++++SW +I+
Sbjct: 414 LDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG 473
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGLMKV 425
N A L +L+ ++ ++P+ T + L A +L + +H+ + + G+
Sbjct: 474 LRLNNRCFEA-LIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 426 EVL-NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
+ L N+L+ Y R GR+N A F N K + SWN +++G+ G +E F ++
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVK 591
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
+ ++P+ G + +G + + +V + + G L
Sbjct: 592 SRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQE 651
Query: 545 SLGVFNAM-VKRDTISWNALISAYAQH 570
+ M V D W AL++A H
Sbjct: 652 AHKFIQKMPVTPDPAVWGALLNACRIH 678
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 32/312 (10%)
Query: 342 GKVNEAQNIFERMEE-RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSL 400
GK+ EA + M+E R V ++ + A++ + +R E GS
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFV-----------ALVRLCEWKRAQEE------GS- 114
Query: 401 LGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWN 460
+V + S +S +G VE+ N+ +A + R G + A +F + ++L SWN
Sbjct: 115 -------KVYSIALSSMSSLG---VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWN 164
Query: 461 TIISGFLTNGCPLQGLEQFSALLNT-PLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR 519
++ G+ G + + + +L +KP+ Y GK+VH +++R
Sbjct: 165 VLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR 224
Query: 520 HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCC 579
+G+ +I + NAL+TMY KCG + + +F+ M +RD ISWNA+IS Y ++G E +
Sbjct: 225 YGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLEL 284
Query: 580 FEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLL 639
F AM+ ++PD T T V+SAC +G G I ++ GF + + + +
Sbjct: 285 FFAMR-GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT-GFAVDISVCNSLTQMY 342
Query: 640 GRSGYLEEAERL 651
+G EAE+L
Sbjct: 343 LNAGSWREAEKL 354
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 335 bits (858), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 213/680 (31%), Positives = 346/680 (50%), Gaps = 20/680 (2%)
Query: 70 RPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSW 129
+P+ ++ A I+TG + +N ++ + +++ + + E+ + + S
Sbjct: 23 QPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVST 82
Query: 130 TTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG 189
TM+S + G V A LFD MP+R+ V W I+ A N H D AF LFR M +
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRT-VVTWT-ILMGWYARNSHFDEAFKLFRQMCRSS 140
Query: 190 --VRPDGYTFTSMLSLC--SVELLDFGRHVHSVVIRSGFLART--SVVNSLITMYFNCGC 243
PD TFT++L C +V G+ VH+ ++ GF +V N L+ Y
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQ-VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRR 199
Query: 244 VVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM 303
+ A +F E+ +D VT+N +I G + ++ +F M+++ P + TF V+
Sbjct: 200 LDLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 304 SSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLV 360
+ L +G Q A S+ TGF +V N + YS +V E + +F+ M E D V
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 361 SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKI 420
S+N++IS + Q + E ++ + +M+ +G + F + ++L + +L ++M L +
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 421 GLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGL 476
L + V NSL+ Y + A IF +LP ++ +SW +ISG++ G GL
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGL 437
Query: 477 EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMY 536
+ F+ + + L+ + GKQ+H +I+R G + G+ LV MY
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMY 497
Query: 537 AKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATF 596
AKCGS+ ++ VF M R+ +SWNALISA+A +G G+ A+ F M I G++PD +
Sbjct: 498 AKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM-IESGLQPDSVSI 556
Query: 597 TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGY 656
VL+ACSH G V+ GT F M IYG P H++C++DLLGR+G EAE+L+
Sbjct: 557 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 657 FGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDH-NNPSVYVLLSNICAAAGQWEEAA 715
F + + S+ +AC H N L A L + + + YV +SNI AAAG+WE+
Sbjct: 617 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 676
Query: 716 NLRDMMREFGTTKQPGCSWI 735
+++ MRE G K P SW+
Sbjct: 677 DVKKAMRERGIKKVPAYSWV 696
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 331 bits (849), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 334/651 (51%), Gaps = 14/651 (2%)
Query: 94 HSHVANSLLSLYAKAEDLASV-ERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQM 152
+ H A LL + ++L + F Y + + T ++S R G V +A ++F+ +
Sbjct: 36 YEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPI 95
Query: 153 PNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVEL-LDF 211
++ NV +++ ++ + A D A F M+ V P Y FT +L +C E L
Sbjct: 96 DSKLNV-LYHTML-KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 212 GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGL 271
G+ +H ++++SGF + L MY C V +A +VF + RD V++N ++ G
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE--RDLVSWNTIVAGY 211
Query: 272 VRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYT 328
+ A M + M + P T VSV+ + S+LR VG + ++++GFD+
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271
Query: 329 AVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRV 388
++ A + MY+ G + A+ +F+ M ER++VSWN MI + Q + A+L + KM
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 389 GIEP-DEFTYGSLLGASD--SLQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWA 444
G++P D G+L +D L+ +H L ++GL + V V+NSLI+ YC+ ++ A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 445 LQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXX 504
+F L ++L+SWN +I GF NG P+ L FS + + +KP+ +
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 505 XXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALI 564
H K +HG ++R + + ALV MYAKCG++ + +F+ M +R +WNA+I
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511
Query: 565 SAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYG 624
Y HG GK A+ FE MQ I+P+ TF V+SACSH GLV+ G + F MM Y
Sbjct: 512 DGYGTHGFGKAALELFEEMQ-KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
Query: 625 FVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVA 684
S+DH+ +VDLLGR+G L EA I N+ ++ AC H N+ A
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAA 630
Query: 685 RLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
L E + ++ +VLL+NI AA WE+ +R M G K PGCS +
Sbjct: 631 ERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 197/435 (45%), Gaps = 58/435 (13%)
Query: 52 LRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDL 111
L+P T+ + + A + R + G ++H +A+R+G + +++ +L+ +YAK
Sbjct: 232 LKPSFITIVSVLPAVSALR----LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKC--- 284
Query: 112 ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD 171
G + A +LFD M R NV WN++I
Sbjct: 285 ----------------------------GSLETARQLFDGMLER-NVVSWNSMID-AYVQ 314
Query: 172 NGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSV 230
N + A +F+ M GV+P + L C+ + L+ GR +H + + G SV
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 231 VNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
VNSLI+MY C V A +FG++++ R V++NAMI G + R DA F M+
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQS--RTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 291 CFSPMEATFVSVMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
P T+VSV+++ + L + A+ +++ D V A + MY+ G + A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 348 QNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
+ IF+ M ER + +WN MI + + A+ + +M++ I+P+ T+ S++ A
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 408 QVVEMVHSLLSKIGLMK--------VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISW 459
+VE + L +MK ++ +++ R GR+N A +P K ++
Sbjct: 553 GLVE---AGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN- 608
Query: 460 NTIISGFLTNGCPLQ 474
+ G + C +
Sbjct: 609 ---VYGAMLGACQIH 620
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 207/630 (32%), Positives = 342/630 (54%), Gaps = 30/630 (4%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAII---TRCGADNGHDDVAFDL 181
D Y +L + + G +G A LFD+MP R +V+ WN +I T CG A+ L
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVS-WNTMISGYTSCGKLED----AWCL 88
Query: 182 FRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFN 240
F M++ G DGY+F+ +L + SV+ D G VH +VI+ G+ V +SL+ MY
Sbjct: 89 FTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAK 148
Query: 241 CGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEA-TF 299
C V DA++ F E+ + V++NA+I G V+V + AF + M+ M+A TF
Sbjct: 149 CERVEDAFEAFKEISE--PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTF 206
Query: 300 VSVMS------SCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
+++ C+ L+ Q A+ +K G + NA ++ Y+ G V++A+ +F+
Sbjct: 207 APLLTLLDDPMFCNLLK---QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDG 263
Query: 354 ME-ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA--SDSLQVV 410
+ +DL+SWN MI+ F + L E+A +++M+R +E D +TY LL A + Q+
Sbjct: 264 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIF 323
Query: 411 -EMVHSLLSKIGLMKV-EVLNSLIAAYCR--NGRINWALQIFSNLPYKSLISWNTIISGF 466
+ +H ++ K GL +V N+LI+ Y + G + AL +F +L K LISWN+II+GF
Sbjct: 324 GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGF 383
Query: 467 LTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEI 526
G ++ FS L ++ +K + Y G+Q+H + GF S
Sbjct: 384 AQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNE 443
Query: 527 SLGNALVTMYAKCGSLDGSLGVFNAMV-KRDTISWNALISAYAQHGQGKEAVCCFEAMQI 585
+ ++L+ MY+KCG ++ + F + K T++WNA+I YAQHG G+ ++ F M
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM-C 502
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYL 645
+ ++ DH TFT +L+ACSH GL+ +G + ++M +Y P ++H++ VDLLGR+G +
Sbjct: 503 NQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLV 562
Query: 646 EEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNIC 705
+A+ LI+ + + + C A G + + VA LLE + + YV LS++
Sbjct: 563 NKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMY 622
Query: 706 AAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ +WEE A+++ MM+E G K PG SWI
Sbjct: 623 SDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 232/476 (48%), Gaps = 49/476 (10%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N +++ T + ++ LFT + S + D Y+ S + A+ + G Q+H
Sbjct: 70 NTMISGYTSCGKLEDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVK----RFDLGEQVH 124
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
I+ G + + +V +SL+ +YAK E + AF EI P+ SW +++ ++ +
Sbjct: 125 GLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIK 184
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
A L M ++ V + D TF +L+L
Sbjct: 185 TAFWLLGLMEMKAAVTM--------------------------------DAGTFAPLLTL 212
Query: 204 CSVELL-DFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
+ + + VH+ V++ G ++ N++I+ Y +CG V DA +VF + G +D +
Sbjct: 213 LDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGL-GGSKDLI 271
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQS 319
++N+MI G + + E AF +F MQ+ T+ ++S+CS G
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 320 IKTGFDAYTAVNNATMTMYSCF--GKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
IK G + T+ NA ++MY F G + +A ++FE ++ +DL+SWN +I+ F Q+ L+E
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 378 AILTYLKMRRVGIEPDEFTYGSLL-GASD--SLQVVEMVHSLLSKIGLMKVE-VLNSLIA 433
A+ + +R I+ D++ + +LL SD +LQ+ + +H+L +K G + E V++SLI
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV 451
Query: 434 AYCRNGRINWALQIFSNLPYK-SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
Y + G I A + F + K S ++WN +I G+ +G L+ FS + N +K
Sbjct: 452 MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVK 507
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 149/310 (48%), Gaps = 43/310 (13%)
Query: 319 SIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETA 378
+IK G + V+N + Y FG + A +F+ M +RD VSWN MIS + E A
Sbjct: 26 AIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDA 85
Query: 379 ILTYLKMRRVGIEPDEFTYGSLLGASDSLQ---VVEMVHSLLSKIGL-MKVEVLNSLIAA 434
+ M+R G + D +++ LL S++ + E VH L+ K G V V +SL+
Sbjct: 86 WCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDM 145
Query: 435 YCRNGRINWALQIFSNLPYKSLISWNTIISGF-----LTNGCPLQGLEQFSA-------- 481
Y + R+ A + F + + +SWN +I+GF + L GL + A
Sbjct: 146 YAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGT 205
Query: 482 ------LLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTM 535
LL+ P+ N KQVH +L+ G EI++ NA+++
Sbjct: 206 FAPLLTLLDDPMFCNLL------------------KQVHAKVLKLGLQHEITICNAMISS 247
Query: 536 YAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHA 594
YA CGS+ + VF+ + +D ISWN++I+ +++H + A F MQ +E D
Sbjct: 248 YADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ-RHWVETDIY 306
Query: 595 TFTIVLSACS 604
T+T +LSACS
Sbjct: 307 TYTGLLSACS 316
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 2/135 (1%)
Query: 514 HGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQG 573
H Y ++ G S+I + N ++ Y K G L + +F+ M KRD++SWN +IS Y G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 574 KEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFS 633
++A C F M+ S G + D +F+ +L + V D G ++ +++ G+ +V S
Sbjct: 83 EDAWCLFTCMKRS-GSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIK-GGYECNVYVGS 140
Query: 634 CIVDLLGRSGYLEEA 648
+VD+ + +E+A
Sbjct: 141 SLVDMYAKCERVEDA 155
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 205/667 (30%), Positives = 352/667 (52%), Gaps = 53/667 (7%)
Query: 78 FGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAST 137
FG+ +H++A RT K HS N LL +K+ + + F ++ D+++W TM+ A +
Sbjct: 16 FGSCIHSYADRT--KLHS---NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 138 RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
+ DA KLF P ++ ++ WNA+I+ +G AF+LF +MQ G++P+ YT
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTIS-WNALISGY-CKSGSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 198 TSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
S+L +C S+ LL G +H I++GF +VVN L+ MY C + +A +F +E
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME- 187
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGC 313
G +++VT+ +M+ G + A FRD+++ + TF SV+++C+S+ RVG
Sbjct: 188 GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGV 247
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQEN 373
Q +K+GF V +A + MY+ ++ A+ + E ME D+VSWN MI ++
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307
Query: 374 LNETAILTYLKMRRVGIEPDEFTYGSLLG----ASDSLQVVEMVHSLLSKIGLMKVEVLN 429
L A+ + +M ++ D+FT S+L + +++ H L+ K G +++N
Sbjct: 308 LIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN 367
Query: 430 -SLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
+L+ Y + G ++ AL++F + K +ISW +++G NG + L+ F + +
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT 427
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
P+ G+QVHG ++ GF S +S+ N+LVTMY KCGSL+ + +
Sbjct: 428 PDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVI 487
Query: 549 FNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGL 608
FN+M RD I+W LI YA++G ++A F++M+
Sbjct: 488 FNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMR------------------------ 523
Query: 609 VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLF 668
+YG P +H++C++DL GRSG + E+L+ ++ + ++
Sbjct: 524 ------------TVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAIL 571
Query: 669 SACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTK 728
+A HGN+ G A+ L+E + NN YV LSN+ +AAG+ +EAAN+R +M+ +K
Sbjct: 572 AASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISK 631
Query: 729 QPGCSWI 735
+PGCSW+
Sbjct: 632 EPGCSWV 638
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 194/404 (48%), Gaps = 62/404 (15%)
Query: 53 RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLA 112
+ + YT + +TA A + +A G Q+H +++G K + +V ++L+ +YAK ++
Sbjct: 224 QSNQYTFPSVLTACA----SVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREME 279
Query: 113 SVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADN 172
S +E D SW +M+ R G +G+AL +F +M
Sbjct: 280 SARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM-------------------- 319
Query: 173 GHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVEL--LDFGRHVHSVVIRSGFLARTSV 230
H+ RDM + D +T S+L+ ++ + H +++++G+ V
Sbjct: 320 -HE-------RDM-----KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLV 366
Query: 231 VNSLITMYFNCGCVVDAYQVF-GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK 289
N+L+ MY G + A +VF G +E +D +++ A++ G ++A +F +M+
Sbjct: 367 NNALVDMYAKRGIMDSALKVFEGMIE---KDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 290 ACFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNE 346
+P + SV+S+ + L + G Q IK+GF + +VNN+ +TMY+ G + +
Sbjct: 424 GGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLED 483
Query: 347 AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRV-GIEPDEFTYGSLLG--- 402
A IF ME RDL++W +I + + L E A + MR V GI P Y ++
Sbjct: 484 ANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFG 543
Query: 403 -ASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRI 441
+ D ++V +++H M+VE V +++AA ++G I
Sbjct: 544 RSGDFVKVEQLLHQ-------MEVEPDATVWKAILAASRKHGNI 580
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 40/272 (14%)
Query: 18 EQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATT 77
+ ++ N ++ R E+L +F ++H ++ D +T+ + + A +R T
Sbjct: 291 DDVVSWNSMIVGCVRQGLIGEALSMFGRMHE-RDMKIDDFTIPSILNCFALSR---TEMK 346
Query: 78 FGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAST 137
+ H ++TG + V N+L+ +YAK + S + F + D SWT +++ +T
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNT 406
Query: 138 RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
G +ALKLF M R G G+ PD
Sbjct: 407 HNGSYDEALKLFCNM--------------RVG-------------------GITPDKIVT 433
Query: 198 TSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
S+LS + + LL+FG+ VH I+SGF + SV NSL+TMY CG + DA +F +E
Sbjct: 434 ASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME- 492
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQ 288
+RD +T+ +I G + EDA F M+
Sbjct: 493 -IRDLITWTCLIVGYAKNGLLEDAQRYFDSMR 523
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 223/736 (30%), Positives = 355/736 (48%), Gaps = 55/736 (7%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ S+ + + N ++++ +R+ + E L+ F ++ S+ L PDH+T I A A +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA----GMS 201
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G +H ++TGL V N+L+S Y
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH-------------------------- 235
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI----GV 190
G V DAL+LFD MP R N+ WN++I R +DNG + +F L +M +
Sbjct: 236 -----GFVTDALQLFDIMPER-NLVSWNSMI-RVFSDNGFSEESFLLLGEMMEENGDGAF 288
Query: 191 RPDGYTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ 249
PD T ++L +C+ E + G+ VH ++ + N+L+ MY CGC+ +A
Sbjct: 289 MPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQM 348
Query: 250 VFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC--FSPMEATFVSVMSSC- 306
+F ++ V++N M+ G F + R M E T ++ + C
Sbjct: 349 IFKMNNN--KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 307 --SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
S L + S+K F V NA + Y+ G ++ AQ +F + + + SWN
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIG 421
+I Q N ++ +L+M+ G+ PD FT SLL A L+ + + VH + +
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 422 LMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFS 480
L + + V S+++ Y G + +F + KSL+SWNT+I+G+L NG P + L F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 481 ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
++ ++ G++ H Y L+H + + +L+ MYAK G
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNG 646
Query: 541 SLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
S+ S VFN + ++ T SWNA+I Y HG KEA+ FE MQ G PD TF VL
Sbjct: 647 SITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ-RTGHNPDDLTFLGVL 705
Query: 601 SACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYF-GA 659
+AC+H GL+ +G R D M + +G P++ H++C++D+LGR+G L++A R++ A
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Query: 660 NSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRD 719
+ I SL S+C H NL +G VA L E + P YVLLSN+ A G+WE+ +R
Sbjct: 766 DVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825
Query: 720 MMREFGTTKQPGCSWI 735
M E K GCSWI
Sbjct: 826 RMNEMSLRKDAGCSWI 841
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 191/427 (44%), Gaps = 18/427 (4%)
Query: 209 LDFGRHVHSVVIRSGFLARTSVV-NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAM 267
++ GR +H +V S L V+ +ITMY CG D+ VF + + ++ +NA+
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS--KNLFQWNAV 157
Query: 268 IDGLVRVDRNEDAFVMFRDMQKAC-FSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTG 323
I R + ++ F +M P T+ V+ +C S + +G +KTG
Sbjct: 158 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG 217
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
V NA ++ Y G V +A +F+ M ER+LVSWN MI +F +E + L
Sbjct: 218 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLG 277
Query: 384 KMRRV----GIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIGLMKVEVL-NSLIAAY 435
+M PD T ++L + + + VH K+ L K VL N+L+ Y
Sbjct: 278 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMY 337
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALL--NTPLKPNAYX 493
+ G I A IF K+++SWNT++ GF G + +L +K +
Sbjct: 338 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 397
Query: 494 XXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMV 553
K++H Y L+ F + NA V YAKCGSL + VF+ +
Sbjct: 398 ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR 457
Query: 554 KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT 613
+ SWNALI +AQ + ++ M+IS G+ PD T +LSACS + + G
Sbjct: 458 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS-GLLPDSFTVCSLLSACSKLKSLRLGK 516
Query: 614 RIFDMMV 620
+ ++
Sbjct: 517 EVHGFII 523
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 9/216 (4%)
Query: 398 GSLLGASDSLQVVEM---VHSLLS-KIGLMKVEVL-NSLIAAYCRNGRINWALQIFSNLP 452
G LL AS + +EM +H L+S L +VL +I Y G + + +F L
Sbjct: 88 GLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR 147
Query: 453 YKSLISWNTIISGFLTNGCPLQGLEQFSALLNT-PLKPNAYXXXXXXXXXXXXXXXXHGK 511
K+L WN +IS + N + LE F +++T L P+ + G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 512 QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHG 571
VHG +++ G ++ +GNALV+ Y G + +L +F+ M +R+ +SWN++I ++ +G
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 572 QGKEAVCCFEAMQISPG---IEPDHATFTIVLSACS 604
+E+ M G PD AT VL C+
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 532 LVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEP 591
++TMYA CGS D S VF+A+ ++ WNA+IS+Y+++ E + F M + + P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 592 DHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
DH T+ V+ AC+ + V G + ++V G V V + +V G G++ +A +L
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKT-GLVEDVFVGNALVSFYGTHGFVTDALQL 244
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 325 bits (833), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 226/736 (30%), Positives = 367/736 (49%), Gaps = 56/736 (7%)
Query: 12 TTTISSEQILKLNHLLATLTRSNQHTESLKLF--TQIHSSHTLRPDHYTLSTAITASANT 69
+TI +E+++ N + +L +SN + E+L+ F Q +SS +R Y + I A +++
Sbjct: 25 VSTIKTEELM--NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI--SLICACSSS 80
Query: 70 RPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSW 129
R A G ++H H + + K + + N +LS+Y K
Sbjct: 81 RSLAQ----GRKIHDHILNSNCKYDTILNNHILSMYGKC--------------------- 115
Query: 130 TTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG 189
G + DA ++FD MP R N+ + ++IT + NG A L+ M +
Sbjct: 116 ----------GSLRDAREVFDFMPER-NLVSYTSVITG-YSQNGQGAEAIRLYLKMLQED 163
Query: 190 VRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAY 248
+ PD + F S++ C S + G+ +H+ VI+ + N+LI MY + DA
Sbjct: 164 LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDAS 223
Query: 249 QVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK-ACFSPMEATFVSVMSSCS 307
+VF + ++D ++++++I G ++ +A ++M F P E F S + +CS
Sbjct: 224 RVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 308 SL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
SL G Q IK+ + MY+ G +N A+ +F+++E D SWN+
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIG 421
+I+ + A+ + +MR G PD + SLL A + +HS + K G
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401
Query: 422 -LMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKS-LISWNTIISGFLTNGCPLQGLEQF 479
L + V NSL+ Y + +F + + +SWNTI++ L + P++ L F
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 480 SALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKC 539
+L + +P+ G QVH Y L+ G + E + N L+ MYAKC
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKC 521
Query: 540 GSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIV 599
GSL + +F++M RD +SW+ LI YAQ G G+EA+ F+ M+ S GIEP+H TF V
Sbjct: 522 GSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK-SAGIEPNHVTFVGV 580
Query: 600 LSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGA 659
L+ACSHVGLV++G +++ M +G P+ +H SC+VDLL R+G L EAER I
Sbjct: 581 LTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEP 640
Query: 660 NSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRD 719
+ + +L SAC GN+ L + A +L+ D N + +VLL ++ A++G WE AA LR
Sbjct: 641 DVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRS 700
Query: 720 MMREFGTTKQPGCSWI 735
M++ K PG SWI
Sbjct: 701 SMKKHDVKKIPGQSWI 716
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 225/698 (32%), Positives = 358/698 (51%), Gaps = 68/698 (9%)
Query: 99 NSLLSLYAKAEDLASVERAFAEIEY----PDDYSWTTML--------------------- 133
NS++S+Y++A D S R F+ ++Y P +Y++ +++
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 134 ----------------SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDV 177
SA + G + A K+F+QM R+ V + ++ G +
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEE-- 292
Query: 178 AFDLFRDMQK-IGVRPDGYTFT----SMLSLCSVELLDFGRHVHSVVIRSGFLA-RTSVV 231
A LF DM I V P+ Y SL L GR VH VI +G + +
Sbjct: 293 ATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIG 352
Query: 232 NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNE---DAFVMFRDMQ 288
N L+ MY CG + DA +VF + +D V++N+MI GL D+N +A ++ M+
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTD--KDSVSWNSMITGL---DQNGCFIEAVERYKSMR 407
Query: 289 KACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVN 345
+ P T +S +SSC+SL+ +G Q +S+K G D +V+NA MT+Y+ G +N
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 467
Query: 346 EAQNIFERMEERDLVSWNIMISMFFQ-ENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS 404
E + IF M E D VSWN +I + E A++ +L +R G + + T+ S+L A
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAV 527
Query: 405 DSLQVVEM---VHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNL-PYKSLISW 459
SL E+ +H L K + + N+LIA Y + G ++ +IFS + + ++W
Sbjct: 528 SSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTW 587
Query: 460 NTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR 519
N++ISG++ N + L+ +L T + +++ G +VH +R
Sbjct: 588 NSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR 647
Query: 520 HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCC 579
S++ +G+ALV MY+KCG LD +L FN M R++ SWN++IS YA+HGQG+EA+
Sbjct: 648 ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKL 707
Query: 580 FEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLL 639
FE M++ PDH TF VLSACSH GL+++G + F+ M + YG P ++HFSC+ D+L
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVL 767
Query: 640 GRSGYLEEAERLIKGGYFGANSNICWSLFSACA-AHG-NLRLGRMVARLLLEKDHNNPSV 697
GR+G L++ E I+ N I ++ AC A+G LG+ A +L + + N
Sbjct: 768 GRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN 827
Query: 698 YVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
YVLL N+ AA G+WE+ R M++ K+ G SW+
Sbjct: 828 YVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 240/521 (46%), Gaps = 60/521 (11%)
Query: 82 LHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGH 141
H+ + L ++ N+L++ Y + D S + F E+ + SW ++S +R
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR--- 79
Query: 142 VGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML 201
NG A RDM K G+ + Y F S+L
Sbjct: 80 ------------------------------NGEHKEALVFLRDMVKEGIFSNQYAFVSVL 109
Query: 202 SLC----SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNC-GCVVDAYQVFGEVEA 256
C SV +L FGR +H ++ + + V N LI+MY+ C G V A FG++E
Sbjct: 110 RACQEIGSVGIL-FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIE- 167
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL-----RV 311
+++ V++N++I + AF +F MQ P E TF S++++ SL R+
Sbjct: 168 -VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRL 226
Query: 312 GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQ 371
Q K+G V + ++ ++ G ++ A+ +F +ME R+ V+ N ++ +
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Query: 372 ENLNETAILTYLKMRR-VGIEPDEFTYGSLLGASDSLQVVE--------MVHSLLSKIGL 422
+ E A ++ M + + P+ +Y LL + + E VH + GL
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 344
Query: 423 MK--VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFS 480
+ V + N L+ Y + G I A ++F + K +SWN++I+G NGC ++ +E++
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 481 ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
++ + P ++ G+Q+HG L+ G +S+ NAL+T+YA+ G
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464
Query: 541 SLDGSLGVFNAMVKRDTISWNALISAYAQHGQG-KEAVCCF 580
L+ +F++M + D +SWN++I A A+ + EAV CF
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 227/461 (49%), Gaps = 31/461 (6%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
R HS + ++ + N+LI Y G V A +VF E+ LR+ V++ ++ G
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP--LRNCVSWACIVSGYS 78
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR-----VGCQAQAQSIKTGFDAY 327
R +++A V RDM K + FVSV+ +C + G Q K +
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138
Query: 328 TAVNNATMTMY-SCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMR 386
V+N ++MY C G V A F +E ++ VSWN +IS++ Q +A + M+
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 387 RVGIEPDEFTYGSLLGASDSL-----QVVEMVHSLLSKIGLM-KVEVLNSLIAAYCRNGR 440
G P E+T+GSL+ + SL +++E + + K GL+ + V + L++A+ ++G
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 441 INWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN-TPLKPNAYXXXXXX- 498
+++A ++F+ + ++ ++ N ++ G + + + F + + + P +Y
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSF 318
Query: 499 --XXXXXXXXXXHGKQVHGYILRHGFSS-EISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
G++VHG+++ G + +GN LV MYAKCGS+ + VF M +
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQ---ISPGIEPDHATFTIV--LSACSHVGLVD 610
D++SWN++I+ Q+G EAV +++M+ I PG +FT++ LS+C+ +
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG------SFTLISSLSSCASLKWAK 432
Query: 611 DGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
G +I + + G +V + ++ L +GYL E ++
Sbjct: 433 LGQQIHGESLKL-GIDLNVSVSNALMTLYAETGYLNECRKI 472
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 148/600 (24%), Positives = 265/600 (44%), Gaps = 51/600 (8%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + + LN L+ L R E+ KLF ++S + P+ Y + + + +
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLS-SFPEYSLAEEV 327
Query: 75 ATTFGNQLHAHAIRTGL-KAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
G ++H H I TGL + N L+++YAK +A R F + D SW +M+
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
+ DQ NG A + ++ M++ + P
Sbjct: 388 TG-------------LDQ--------------------NGCFIEAVERYKSMRRHDILPG 414
Query: 194 GYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
+T S LS C S++ G+ +H ++ G SV N+L+T+Y G + + ++F
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRN-EDAFVMFRDMQKACFSPMEATFVSVMSSCSSL-- 309
+ D V++N++I L R +R+ +A V F + Q+A TF SV+S+ SSL
Sbjct: 475 SMPE--HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 310 -RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM-EERDLVSWNIMIS 367
+G Q ++K NA + Y G+++ + IF RM E RD V+WN MIS
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Query: 368 MFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-M 423
+ L A+ M + G D F Y ++L A S+ +E VH+ + L
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 424 KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL- 482
V V ++L+ Y + GR+++AL+ F+ +P ++ SWN++ISG+ +G + L+ F +
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 483 LNTPLKPNAYXXXXXXXXXXXXXXXXHG-KQVHGYILRHGFSSEISLGNALVTMYAKCGS 541
L+ P+ G K +G + I + + + + G
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 542 LDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
LD M +K + + W ++ A + G++A +A ++ +EP++A ++L
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCR-ANGRKAELGKKAAEMLFQLEPENAVNYVLL 831
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 218/725 (30%), Positives = 358/725 (49%), Gaps = 62/725 (8%)
Query: 23 LNHLLATLTRSNQHTESLKLFTQ-IHSSHTLRP-DHYTLSTAITASANTRPAATATTFGN 80
+NH ++ R N +L +F + + + R D TL A+ A G
Sbjct: 43 INHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDLKR------GC 96
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
Q+H + +G + V+N+++ +Y KA + F + PD SW T+LS
Sbjct: 97 QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG----- 151
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSM 200
FD DN +A + M+ GV D +T+++
Sbjct: 152 --------FD--------------------DN---QIALNFVVRMKSAGVVFDAFTYSTA 180
Query: 201 LSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLR 259
LS C E G + S V+++G + V NS ITMY G A +VF E+ +
Sbjct: 181 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEM--SFK 238
Query: 260 DHVTYNAMIDGLVRVDR-NEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQA 315
D +++N+++ GL + +A V+FRDM + +F SV+++C + L++ Q
Sbjct: 239 DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQI 298
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
IK G+++ V N M+ YS G + +++F +M ER++VSW MIS +
Sbjct: 299 HGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNK 353
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGLM-KVEVLNSL 431
+ A+ +L MR G+ P+E T+ L+ A ++ ++ +H L K G + + V NS
Sbjct: 354 DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSF 413
Query: 432 IAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQF-SALLNTPLKPN 490
I Y + + A + F ++ ++ +ISWN +ISGF NG + L+ F SA T
Sbjct: 414 ITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEY 473
Query: 491 AYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFN 550
+ G++ H ++L+ G +S + +AL+ MYAK G++D S VFN
Sbjct: 474 TFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFN 533
Query: 551 AMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVD 610
M +++ W ++ISAY+ HG + + F M I + PD TF VL+AC+ G+VD
Sbjct: 534 EMSQKNQFVWTSIISAYSSHGDFETVMNLFHKM-IKENVAPDLVTFLSVLTACNRKGMVD 592
Query: 611 DGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSA 670
G IF+MM+ +Y PS +H+SC+VD+LGR+G L+EAE L+ G ++ S+ +
Sbjct: 593 KGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGS 652
Query: 671 CAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQP 730
C HGN+++G VA L +E YV + NI A +W++AA +R MR+ +K+
Sbjct: 653 CRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEA 712
Query: 731 GCSWI 735
G SWI
Sbjct: 713 GFSWI 717
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 98/194 (50%), Gaps = 11/194 (5%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I+ +I+ N +++ ++ E+LK+F + ++ P+ YT + + A A +
Sbjct: 433 ITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDISV 490
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G + HAH ++ GL + V+++LL +YAK ++ E+ F E+ + + WT+++S
Sbjct: 491 KQ--GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVA----VWNAIITRCGADNGHDDVAFDLFRDMQKI-G 189
A + G + LF +M + NVA + +++T C G D +++F M ++
Sbjct: 549 AYSSHGDFETVMNLFHKMI-KENVAPDLVTFLSVLTACNR-KGMVDKGYEIFNMMIEVYN 606
Query: 190 VRPDGYTFTSMLSL 203
+ P ++ M+ +
Sbjct: 607 LEPSHEHYSCMVDM 620
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 332/607 (54%), Gaps = 27/607 (4%)
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAII---TRCGADNGHDDVAFDLFRDMQKIGVR 191
A +RL + DAL+LFD+M N+++ +WN +I T CG A + M GV+
Sbjct: 75 ADSRL--MEDALQLFDEM-NKADAFLWNVMIKGFTSCGLYIE----AVQFYSRMVFAGVK 127
Query: 192 PDGYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
D +T+ ++ S+ + L+ G+ +H++VI+ GF++ V NSLI++Y GC DA +V
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL- 309
F E+ RD V++N+MI G + + + ++F++M K F P + +S + +CS +
Sbjct: 188 FEEMPE--RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 310 ------RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
+ C A I+TG V + + MYS +G+V+ A+ IF M +R++V+WN
Sbjct: 246 SPKMGKEIHCHAVRSRIETG---DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 364 IMISMFFQENLNETAILTYLKM-RRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGL 422
+MI + + A L + KM + G++PD T +LL AS L+ +H + G
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEG-RTIHGYAMRRGF 361
Query: 423 MKVEVLNS-LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSA 481
+ VL + LI Y G++ A IF + K++ISWN+II+ ++ NG LE F
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE 421
Query: 482 LLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGS 541
L ++ L P++ G+++H YI++ + S + N+LV MYA CG
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 542 LDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLS 601
L+ + FN ++ +D +SWN++I AYA HG G+ +V F M I+ + P+ +TF +L+
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM-IASRVNPNKSTFASLLA 540
Query: 602 ACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANS 661
ACS G+VD+G F+ M YG P ++H+ C++DL+GR+G A+R ++ F +
Sbjct: 541 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA 600
Query: 662 NICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMM 721
I SL +A H ++ + A + + +H+N YVLL N+ A AG+WE+ ++ +M
Sbjct: 601 RIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLM 660
Query: 722 REFGTTK 728
G ++
Sbjct: 661 ESKGISR 667
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 142/606 (23%), Positives = 266/606 (43%), Gaps = 54/606 (8%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++ T + E+++ ++++ + ++ D +T I + A ++ G ++H
Sbjct: 99 NVMIKGFTSCGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVAGI----SSLEEGKKIH 153
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
A I+ G + +V NSL+SLY K E+ F E+ D SW +M+S LG
Sbjct: 154 AMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGF 213
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
+L LF++M K G +PD ++ S L
Sbjct: 214 SSLM---------------------------------LFKEMLKCGFKPDRFSTMSALGA 240
Query: 204 CS-VELLDFGRHVHSVVIRSGF-LARTSVVNSLITMYFNCGCVVDAYQVF-GEVEAGLRD 260
CS V G+ +H +RS V+ S++ MY G V A ++F G ++ R+
Sbjct: 241 CSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ---RN 297
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSLRVGCQAQAQS 319
V +N MI R R DAF+ F+ M ++ P T ++++ + S++ G +
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA-SAILEGRTIHGYA 356
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
++ GF + + A + MY G++ A+ IF+RM E++++SWN +I+ + Q N +A+
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGA-SDSLQVVE--MVHSLLSKIGLM-KVEVLNSLIAAY 435
+ ++ + PD T S+L A ++SL + E +H+ + K +LNSL+ Y
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
G + A + F+++ K ++SWN+II + +G + FS ++ + + PN
Sbjct: 477 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFA 536
Query: 496 XXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK 554
G + + R +G I ++ + + G+ + M
Sbjct: 537 SLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF 596
Query: 555 RDTIS-WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT 613
T W +L++A H + F A QI + + ++L+ + G +D
Sbjct: 597 VPTARIWGSLLNASRNHKD--ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVN 654
Query: 614 RIFDMM 619
RI +M
Sbjct: 655 RIKLLM 660
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 133/289 (46%), Gaps = 44/289 (15%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFG 79
I+ N ++ R+ + T++ F ++ + L+PD + S N PA +A G
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPD-------VITSINLLPA-SAILEG 349
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRL 139
+H +A+R G H + +L+ +Y + L S E F + + SW ++++A +
Sbjct: 350 RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ- 408
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTS 199
NG + A +LF+++ + PD T S
Sbjct: 409 --------------------------------NGKNYSALELFQELWDSSLVPDSTTIAS 436
Query: 200 MLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
+L + L L GR +H+ +++S + + T ++NSL+ MY CG + DA + F + L
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL--L 494
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
+D V++N++I + +F +M + +P ++TF S++++CS
Sbjct: 495 KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 99/196 (50%), Gaps = 16/196 (8%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
++ + ++ N ++A ++ ++ +L+LF ++ S +L PD T+++ + A A +
Sbjct: 391 MAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS-SLVPDSTTIASILPAYAES----L 445
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
+ + G ++HA+ +++ +++ + NSL+ +YA DL + F I D SW +++
Sbjct: 446 SLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIM 505
Query: 135 ASTRLGHVGDALKLFDQM------PNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK- 187
A G ++ LF +M PN+S A +++ C +G D ++ F M++
Sbjct: 506 AYAVHGFGRISVWLFSEMIASRVNPNKSTFA---SLLAACSI-SGMVDEGWEYFESMKRE 561
Query: 188 IGVRPDGYTFTSMLSL 203
G+ P + ML L
Sbjct: 562 YGIDPGIEHYGCMLDL 577
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 322 bits (825), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 197/667 (29%), Positives = 336/667 (50%), Gaps = 47/667 (7%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G++LH+ ++ G + + N+L+S+YAK +DL++ R
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR---------------------- 238
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
LFD + + +WN+I++ + +G +LFR+M G P+ YT
Sbjct: 239 ---------LFDGFQEKGDAVLWNSILSSY-STSGKSLETLELFREMHMTGPAPNSYTIV 288
Query: 199 SMLSLCS-VELLDFGRHVHSVVIRSG-FLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
S L+ C G+ +H+ V++S + V N+LI MY CG + A ++ ++
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 348
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGC 313
D VT+N++I G V+ ++A F DM A E + S++++ S+L G
Sbjct: 349 A--DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 406
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQEN 373
+ A IK G+D+ V N + MYS F RM ++DL+SW +I+ + Q +
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466
Query: 374 LNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ---VVEMVHSLLSKIGLMKVEVLNS 430
+ A+ + + + +E DE GS+L AS L+ +V+ +H + + GL+ + N
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE 526
Query: 431 LIAAY--CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
L+ Y CRN + +A ++F ++ K ++SW ++IS NG + +E F ++ T L
Sbjct: 527 LVDVYGKCRN--MGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
++ G+++H Y+LR GF E S+ A+V MYA CG L + V
Sbjct: 585 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 644
Query: 549 FNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGL 608
F+ + ++ + + ++I+AY HG GK AV F+ M+ + PDH +F +L ACSH GL
Sbjct: 645 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMR-HENVSPDHISFLALLYACSHAGL 703
Query: 609 VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLF 668
+D+G +M + Y P +H+ C+VD+LGR+ + EA +K + + +L
Sbjct: 704 LDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALL 763
Query: 669 SACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTK 728
+AC +H +G + A+ LLE + NP VL+SN+ A G+W + +R M+ G K
Sbjct: 764 AACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEK 823
Query: 729 QPGCSWI 735
PGCSWI
Sbjct: 824 HPGCSWI 830
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 165/618 (26%), Positives = 290/618 (46%), Gaps = 46/618 (7%)
Query: 138 RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGA--DNGHDDVAFDLFRDMQKIGVRPDGY 195
+ G + DA K+FD+MP+R+ A WN +I GA NG A L+ +M+ GV
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFA-WNTMI---GAYVSNGEPASALALYWNMRVEGVPLGLS 183
Query: 196 TFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF-G 252
+F ++L C+ +L D G +HS++++ G+ + +VN+L++MY + A ++F G
Sbjct: 184 SFPALLKACA-KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSL 309
E G D V +N+++ ++ + +FR+M +P T VS +++C S
Sbjct: 243 FQEKG--DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 310 RVGCQAQAQSIKTG-FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISM 368
++G + A +K+ + V NA + MY+ GK+ +A+ I +M D+V+WN +I
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGL-MK 424
+ Q + + A+ + M G + DE + S++ AS L + +H+ + K G
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
++V N+LI Y + + + F + K LISW T+I+G+ N C ++ LE F +
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
++ + K++H +ILR G + + N LV +Y KC ++
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGY 539
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+ VF ++ +D +SW ++IS+ A +G EAV F M + G+ D +LSA +
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM-VETGLSADSVALLCILSAAA 598
Query: 605 HVGLVDDGTRIFDMMVNIYGF-------VPSVDHFSCIVDLLGRSGYLEEAERLIKGGYF 657
+ ++ G I ++ GF V VD ++C DL + ER Y
Sbjct: 599 SLSALNKGREIHCYLLR-KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYT 657
Query: 658 GANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSV----YVLLSNICAAAGQWEE 713
S+ +A HG G+ L + H N S ++ L C+ AG +E
Sbjct: 658 --------SMINAYGMHG---CGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDE 706
Query: 714 AAN-LRDMMREFGTTKQP 730
L+ M E+ P
Sbjct: 707 GRGFLKIMEHEYELEPWP 724
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 215/461 (46%), Gaps = 44/461 (9%)
Query: 197 FTSMLSLC-SVELLDFGRHVHSVVIRS------GFLARTSVVNSLITMYFNCGCVVDAYQ 249
F +L LC + GR +HS + ++ FLA L+ MY CG + DA +
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLA-----GKLVFMYGKCGSLDDAEK 137
Query: 250 VFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
VF E+ R +N MI V A ++ +M+ ++F +++ +C+ L
Sbjct: 138 VFDEMPD--RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 195
Query: 310 ---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER-DLVSWNIM 365
R G + + +K G+ + + NA ++MY+ ++ A+ +F+ +E+ D V WN +
Sbjct: 196 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 255
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHS--LLSKI 420
+S + + + + +M G P+ +T S L A D ++ +H+ L S
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 421 GLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFS 480
++ V N+LIA Y R G++ A +I + +++WN++I G++ N + LE FS
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375
Query: 481 ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
++ K + G ++H Y+++HG+ S + +GN L+ MY+KC
Sbjct: 376 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC- 434
Query: 541 SLDGSLG-VFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIV 599
+L +G F M +D ISW +I+ YAQ+ EA+ F + +E D +
Sbjct: 435 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA-KKRMEIDEMILGSI 493
Query: 600 LSACS-------------HV---GLVDDGTRIFDMMVNIYG 624
L A S H+ GL+D T I + +V++YG
Sbjct: 494 LRASSVLKSMLIVKEIHCHILRKGLLD--TVIQNELVDVYG 532
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 159/321 (49%), Gaps = 14/321 (4%)
Query: 293 SPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTA--VNNATMTMYSCFGKVNEA 347
SP+EA F V+ C R G Q ++ KT F ++ + + MY G +++A
Sbjct: 78 SPVEA-FAYVLELCGKRRAVSQGRQLHSRIFKT-FPSFELDFLAGKLVFMYGKCGSLDDA 135
Query: 348 QNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
+ +F+ M +R +WN MI + +A+ Y MR G+ ++ +LL A L
Sbjct: 136 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 195
Query: 408 QVVE---MVHSLLSKIGLMKVE-VLNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNTI 462
+ + +HSLL K+G ++N+L++ Y +N ++ A ++F K + WN+I
Sbjct: 196 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 255
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG- 521
+S + T+G L+ LE F + T PN+Y GK++H +L+
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 522 FSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFE 581
SSE+ + NAL+ MY +CG + + + M D ++WN+LI Y Q+ KEA+ F
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375
Query: 582 AMQISPGIEPDHATFTIVLSA 602
M I+ G + D + T +++A
Sbjct: 376 DM-IAAGHKSDEVSMTSIIAA 395
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 209/476 (43%), Gaps = 50/476 (10%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N +L++ + S + E+L+LF ++H + P+ YT+ +A+TA + G ++H
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPA-PNSYTIVSALTAC----DGFSYAKLGKEIH 307
Query: 84 AHAIRTGLKAHS-HVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHV 142
A +++ + +V N+L+++Y + + ER
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER-------------------------- 341
Query: 143 GDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS 202
+ QM N ++V WN++I + N A + F DM G + D + TS+++
Sbjct: 342 -----ILRQMNN-ADVVTWNSLI-KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394
Query: 203 LCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH 261
+ L G +H+ VI+ G+ + V N+LI MY C + F + +D
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD--KDL 452
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQ 318
+++ +I G + D + +A +FRD+ K E S++ + S L+ + +
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 319 SIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETA 378
++ G T + N + +Y + A +FE ++ +D+VSW MIS A
Sbjct: 513 ILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEA 571
Query: 379 ILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAA 434
+ + +M G+ D +L A+ SL + +H L + G ++ + +++
Sbjct: 572 VELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDM 631
Query: 435 YCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
Y G + A +F + K L+ + ++I+ + +GC +E F + + + P+
Sbjct: 632 YACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPD 687
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 509 HGKQVHGYILRHGFSSEIS-LGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAY 567
G+Q+H I + S E+ L LV MY KCGSLD + VF+ M R +WN +I AY
Sbjct: 98 QGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157
Query: 568 AQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVP 627
+G+ A+ + M++ G+ ++F +L AC+ + + G+ + ++V + G+
Sbjct: 158 VSNGEPASALALYWNMRVE-GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKL-GYHS 215
Query: 628 SVDHFSCIVDLLGRSGYLEEAERLIKG 654
+ + +V + ++ L A RL G
Sbjct: 216 TGFIVNALVSMYAKNDDLSAARRLFDG 242
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 211/713 (29%), Positives = 352/713 (49%), Gaps = 52/713 (7%)
Query: 36 HTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHS 95
+ ESL +F + + P+ Y LS+ I A + F QL + +++G
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDV 183
Query: 96 HVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNR 155
+V L+ Y K G++ A +FD +P +
Sbjct: 184 YVGTLLIDFYLKD-------------------------------GNIDYARLVFDALPEK 212
Query: 156 SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSV-ELLDFGRH 214
S V W +I+ C G V+ LF + + V PDGY +++LS CS+ L+ G+
Sbjct: 213 STVT-WTTMISGC-VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQ 270
Query: 215 VHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRV 274
+H+ ++R G S++N LI Y CG V+ A+++F + ++ +++ ++ G +
Sbjct: 271 IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN--KNIISWTTLLSGYKQN 328
Query: 275 DRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVN 331
+++A +F M K P S+++SC+SL G Q A +IK + V
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 332 NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMF----FQENLNETAILTYLKMRR 387
N+ + MY+ + +A+ +F+ D+V +N MI + Q L+E A+ + MR
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE-ALNIFRDMRF 447
Query: 388 VGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINW 443
I P T+ SLL AS SL + + +H L+ K GL + + ++LI Y +
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 444 ALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXX 503
+ +F + K L+ WN++ +G++ + L F L + +P+ +
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 504 XXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNAL 563
G++ H +L+ G + NAL+ MYAKCGS + + F++ RD + WN++
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 564 ISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIY 623
IS+YA HG+GK+A+ E M +S GIEP++ TF VLSACSH GLV+DG + F++M+ +
Sbjct: 628 ISSYANHGEGKKALQMLEKM-MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-F 685
Query: 624 GFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMV 683
G P +H+ C+V LLGR+G L +A LI+ + + SL S CA GN+ L
Sbjct: 686 GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHA 745
Query: 684 ARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWIG 736
A + + D + + +LSNI A+ G W EA +R+ M+ G K+PG SWIG
Sbjct: 746 AEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIG 798
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 224/460 (48%), Gaps = 46/460 (10%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ ++ I+ LL+ ++ H E+++LFT + S L+PD Y S+ +T+ A+
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLH---- 364
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A FG Q+HA+ I+ L S+V NSL+ +YAK + L + F D + M+
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+RLG W H+ A ++FRDM+ +RP
Sbjct: 425 GYSRLG------------------TQWEL----------HE--ALNIFRDMRFRLIRPSL 454
Query: 195 YTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
TF S+L + S+ L + +H ++ + G ++LI +Y NC C+ D+ VF E
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE 514
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLR 310
++ ++D V +N+M G V+ NE+A +F ++Q + P E TF +++++ +S++
Sbjct: 515 MK--VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQ 572
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFF 370
+G + Q +K G + + NA + MY+ G +A F+ RD+V WN +IS +
Sbjct: 573 LGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYA 632
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLLSKIGLM-KVE 426
+ A+ KM GIEP+ T+ +L A +VE L+ + G+ + E
Sbjct: 633 NHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETE 692
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNTIISG 465
+++ R GR+N A ++ +P K + I W +++SG
Sbjct: 693 HYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 222/465 (47%), Gaps = 19/465 (4%)
Query: 188 IGVRPDGYTFTSMLSL-CSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
IG+R F +L L S +LL + VH +I G T + N LI +Y G +V
Sbjct: 39 IGIRGR-REFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVY 97
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACF-SPMEATFVSVMSS 305
A +VF ++ R+ V+++ M+ E++ V+F + + SP E S + +
Sbjct: 98 ARKVFEKMPE--RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQA 155
Query: 306 CSSLR-----VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLV 360
CS L + Q Q+ +K+GFD V + Y G ++ A+ +F+ + E+ V
Sbjct: 156 CSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV 215
Query: 361 SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLL 417
+W MIS + + ++ + ++ + PD + ++L A L +E +H+ +
Sbjct: 216 TWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI 275
Query: 418 SKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGL 476
+ GL M ++N LI +Y + GR+ A ++F+ +P K++ISW T++SG+ N + +
Sbjct: 276 LRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAM 335
Query: 477 EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMY 536
E F+++ LKP+ Y G QVH Y ++ ++ + N+L+ MY
Sbjct: 336 ELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMY 395
Query: 537 AKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHG---QGKEAVCCFEAMQISPGIEPDH 593
AKC L + VF+ D + +NA+I Y++ G + EA+ F M+ I P
Sbjct: 396 AKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL-IRPSL 454
Query: 594 ATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDL 638
TF +L A + + + +I +M YG + S ++D+
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSALIDV 498
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 9/200 (4%)
Query: 513 VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQ 572
VHG I+ G + L N L+ +Y++ G + + VF M +R+ +SW+ ++SA HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 573 GKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT-RIFDMMVNIY--GFVPSV 629
+E++ F + P+ + + ACS GL G +F + + GF V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 630 DHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SLFSACAAHGNLRLGRMVARLLL 688
+ ++D + G ++ A + S + W ++ S C G + + L+
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDA--LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 689 EKDHNNPSVYVLLSNICAAA 708
E D+ P Y+L + + A +
Sbjct: 242 E-DNVVPDGYILSTVLSACS 260
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 197/608 (32%), Positives = 316/608 (51%), Gaps = 14/608 (2%)
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYT 196
T G + +A ++FD++ + WN ++ A +G + LF+ M GV D YT
Sbjct: 140 TNCGDLKEASRVFDEVKIEKAL-FWNILMNEL-AKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 197 FTSM-LSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
F+ + S S+ + G +H +++SGF R SV NSL+ Y V A +VF E+
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---G 312
RD +++N++I+G V E +F M + AT VSV + C+ R+ G
Sbjct: 258 E--RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
+ +K F N + MYS G ++ A+ +F M +R +VS+ MI+ + +E
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLLSKIGL-MKVEVL 428
L A+ + +M GI PD +T ++L ++++ VH + + L + V
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP-L 487
N+L+ Y + G + A +FS + K +ISWNTII G+ N + L F+ LL
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF 495
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
P+ G+++HGYI+R+G+ S+ + N+LV MYAKCG+L +
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555
Query: 548 VFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG 607
+F+ + +D +SW +I+ Y HG GKEA+ F M+ GIE D +F +L ACSH G
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR-QAGIEADEISFVSLLYACSHSG 614
Query: 608 LVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSL 667
LVD+G R F++M + P+V+H++CIVD+L R+G L +A R I+ ++ I +L
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 668 FSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTT 727
C H +++L VA + E + N YVL++NI A A +WE+ LR + + G
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 728 KQPGCSWI 735
K PGCSWI
Sbjct: 735 KNPGCSWI 742
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 228/467 (48%), Gaps = 23/467 (4%)
Query: 193 DGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
D T S+L LC+ + L G+ V + + +GF+ +++ + L MY NCG + +A +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV 311
EV+ + + +N +++ L + + +F+ M + TF V S SSLR
Sbjct: 153 DEVK--IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 312 ---GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISM 368
G Q +K+GF +V N+ + Y +V+ A+ +F+ M ERD++SWN +I+
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLL-GASDS--LQVVEMVHSLLSKIGLMKV 425
+ L E + +++M GIE D T S+ G +DS + + VHS+ K +
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 426 EVL-NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
+ N+L+ Y + G ++ A +F + +S++S+ ++I+G+ G + ++ F +
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
+ P+ Y GK+VH +I + +I + NAL+ MYAKCGS+
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+ VF+ M +D ISWN +I Y+++ EA+ F + PD T VL AC+
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFS------CIVDLLGRSGYL 645
+ D G I+G++ +FS +VD+ + G L
Sbjct: 511 SLSAFDKGR-------EIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 183/360 (50%), Gaps = 11/360 (3%)
Query: 298 TFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM 354
T SV+ C+ SL+ G + GF + + + MY+ G + EA +F+ +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 355 EERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---E 411
+ + WNI+++ + +I + KM G+E D +T+ + + SL+ V E
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 412 MVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNG 470
+H + K G + V NSL+A Y +N R++ A ++F + + +ISWN+II+G+++NG
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 471 CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN 530
+GL F +L + ++ + G+ VH ++ FS E N
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 531 ALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIE 590
L+ MY+KCG LD + VF M R +S+ ++I+ YA+ G EAV FE M+ GI
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME-EEGIS 394
Query: 591 PDHATFTIVLSACSHVGLVDDGTRIFD-MMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
PD T T VL+ C+ L+D+G R+ + + N GF V + ++D+ + G ++EAE
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAE 452
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 149/601 (24%), Positives = 261/601 (43%), Gaps = 60/601 (9%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ E+ L N L+ L +S + S+ LF ++ SS + D YT S + ++ R
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G QLH +++G + V NSL++ Y K + + S + F E+ D SW ++++
Sbjct: 214 ----GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
G+V NG + +F M G+ D
Sbjct: 270 -----GYVS----------------------------NGLAEKGLSVFVQMLVSGIEIDL 296
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
T S+ + C+ L+ GR VHS+ +++ F N+L+ MY CG + A VF E
Sbjct: 297 ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE 356
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC 313
+ R V+Y +MI G R +A +F +M++ SP T +V++ C+ R+
Sbjct: 357 MSD--RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 314 QAQA--QSIKT---GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISM 368
+ + + IK GFD + V+NA M MY+ G + EA+ +F M +D++SWN +I
Sbjct: 415 EGKRVHEWIKENDLGFDIF--VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 369 FFQE-NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGLM- 423
+ + NE L L + PDE T +L A SL + +H + + G
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 424 KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALL 483
V NSL+ Y + G + A +F ++ K L+SW +I+G+ +G + + F+ +
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 484 NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN--ALVTMYAKCGS 541
++ + G + I+RH E ++ + +V M A+ G
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFN-IMRHECKIEPTVEHYACIVDMLARTGD 651
Query: 542 LDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
L + M + D W AL+ H K A E + +EP++ + +++
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV---FELEPENTGYYVLM 708
Query: 601 S 601
+
Sbjct: 709 A 709
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 212/688 (30%), Positives = 327/688 (47%), Gaps = 64/688 (9%)
Query: 76 TTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSA 135
T+ G Q+H +R G A++LL +YAK + F E
Sbjct: 196 TSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG-------KRFVE--------------- 233
Query: 136 STRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
+L++F +P +++V+ W+AII C N +A F++MQK+
Sbjct: 234 ---------SLRVFQGIPEKNSVS-WSAIIAGC-VQNNLLSLALKFFKEMQKVNAGVSQS 282
Query: 196 TFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV 254
+ S+L C+ + L G +H+ ++S F A V + + MY C + DA +F
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS 342
Query: 255 EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRV 311
E R +YNAMI G + + A ++F + + E + V +C+ L
Sbjct: 343 ENLNRQ--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 312 GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQ 371
G Q +IK+ V NA + MY + EA +F+ M RD VSWN +I+ Q
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 372 ENLNETAILTYLKMRRVGIEPDEFTYGSLLGA--SDSLQVVEMVHSLLSKIGLM-KVEVL 428
+ ++ M R IEPDEFT+GS+L A SL +HS + K G+ V
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKS--------------------LISWNTIISGFLT 468
SLI Y + G I A +I S ++ +SWN+IISG++
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 469 NGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISL 528
F+ ++ + P+ + GKQ+H +++ S++ +
Sbjct: 581 KEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYI 640
Query: 529 GNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPG 588
+ LV MY+KCG L S +F ++RD ++WNA+I YA HG+G+EA+ FE M I
Sbjct: 641 CSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM-ILEN 699
Query: 589 IEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA 648
I+P+H TF +L AC+H+GL+D G F MM YG P + H+S +VD+LG+SG ++ A
Sbjct: 700 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 759
Query: 649 ERLIKGGYFGANSNICWSLFSACAAH-GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAA 707
LI+ F A+ I +L C H N+ + LL D + S Y LLSN+ A
Sbjct: 760 LELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYAD 819
Query: 708 AGQWEEAANLRDMMREFGTTKQPGCSWI 735
AG WE+ ++LR MR F K+PGCSW+
Sbjct: 820 AGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 180/693 (25%), Positives = 323/693 (46%), Gaps = 54/693 (7%)
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A G Q HAH I +G + + V N LL +Y + D S F ++ D SW M++
Sbjct: 63 ALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMIN 122
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
++ + A F+ MP R +V WN++++ NG + ++F DM + G+ DG
Sbjct: 123 GYSKSNDMFKANSFFNMMPVR-DVVSWNSMLSGY-LQNGESLKSIEVFVDMGREGIEFDG 180
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
TF +L +CS +E G +H +V+R G ++L+ MY V++ +VF
Sbjct: 181 RTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 240
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLR 310
+ ++ V+++A+I G V+ + A F++MQK ++ + SV+ SC S LR
Sbjct: 241 IPE--KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFF 370
+G Q A ++K+ F A V AT+ MY+ + +AQ +F+ E + S+N MI+ +
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLL-------GASDSLQVVEM-VHSLLSKIGL 422
QE A+L + ++ G+ DE + + G S+ LQ+ + + S LS
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS---- 414
Query: 423 MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL 482
+ V V N+ I Y + + A ++F + + +SWN II+ NG + L F ++
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 483 LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSL 542
L + ++P+ + +G ++H I++ G +S S+G +L+ MY+KCG +
Sbjct: 475 LRSRIEPDEF-TFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 543 DGSLGVFNAMVKRDT--------------------ISWNALISAYAQHGQGKEAVCCFEA 582
+ + + + +R +SWN++IS Y Q ++A F
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRS 642
M + GI PD T+ VL C+++ G +I ++ V S +VD+ +
Sbjct: 594 M-MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK-KELQSDVYICSTLVDMYSKC 651
Query: 643 GYLEEA----ERLIKGGYFGANSNICWSLFSACAAHGNLRLG-RMVARLLLEKDHNNPSV 697
G L ++ E+ ++ + N+ IC A HG ++ R++LE N
Sbjct: 652 GDLHDSRLMFEKSLRRDFVTWNAMIC-----GYAHHGKGEEAIQLFERMILENIKPNHVT 706
Query: 698 YVLLSNICAAAGQWEEAANLRDMM-REFGTTKQ 729
++ + CA G ++ MM R++G Q
Sbjct: 707 FISILRACAHMGLIDKGLEYFYMMKRDYGLDPQ 739
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 315 bits (808), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 220/735 (29%), Positives = 352/735 (47%), Gaps = 48/735 (6%)
Query: 11 STTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTR 70
S + +S+ + N ++ + + E + F ++ +RPD ++LS I S +
Sbjct: 124 SQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV-FGVRPDAFSLS--IVVSVMCK 180
Query: 71 PAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWT 130
G Q+H +R L S + +L+ +Y K
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFK----------------------- 217
Query: 131 TMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGV 190
G DA ++F ++ ++SNV +WN +I G +G + + DL+ + V
Sbjct: 218 --------FGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG-SGICESSLDLYMLAKNNSV 268
Query: 191 RPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ 249
+ +FT L CS E FGR +H V++ G V SL++MY CG V +A
Sbjct: 269 KLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAET 328
Query: 250 VFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
VF V + +NAM+ D A +F M++ P T +V+S CS L
Sbjct: 329 VFSCVVD--KRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVL 386
Query: 310 RV---GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMI 366
+ G A+ K + + + +A +T+YS G +A +F+ MEE+D+V+W +I
Sbjct: 387 GLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLI 446
Query: 367 SMFFQENLNETAILTYLKMRRV--GIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIG 421
S + + A+ + M+ ++PD S+ A L+ + VH + K G
Sbjct: 447 SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTG 506
Query: 422 L-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFS 480
L + V V +SLI Y + G AL++F+++ +++++WN++IS + N P ++ F+
Sbjct: 507 LVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFN 566
Query: 481 ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
+L+ + P++ GK +HGY LR G S+ L NAL+ MY KCG
Sbjct: 567 LMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCG 626
Query: 541 SLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
+ +F M + I+WN +I Y HG A+ F+ M+ G PD TF ++
Sbjct: 627 FSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMK-KAGESPDDVTFLSLI 685
Query: 601 SACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGAN 660
SAC+H G V++G IF+ M YG P+++H++ +VDLLGR+G LEEA IK A+
Sbjct: 686 SACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEAD 745
Query: 661 SNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDM 720
S+I L SA H N+ LG + A LL + S YV L N+ AG EAA L +
Sbjct: 746 SSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGL 805
Query: 721 MREFGTTKQPGCSWI 735
M+E G KQPGCSWI
Sbjct: 806 MKEKGLHKQPGCSWI 820
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 166/717 (23%), Positives = 320/717 (44%), Gaps = 53/717 (7%)
Query: 23 LNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQL 82
+N + L + ++ ++L L+++ S +T + + A + A T ++G +
Sbjct: 27 INSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACS----ALTNLSYGKTI 82
Query: 83 HAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHV 142
H + G + +A SL+++Y K L + F W+ S +
Sbjct: 83 HGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD--------GWSQSQSGVSA---- 130
Query: 143 GDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS 202
+V VWN++I + FR M GVRPD ++ + ++S
Sbjct: 131 -------------RDVTVWNSMIDGYFKFRRFKE-GVGCFRRMLVFGVRPDAFSLSIVVS 176
Query: 203 LCSVE---LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLR 259
+ E + G+ +H ++R+ + + +LI MYF G +DA++VF E+E
Sbjct: 177 VMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK-S 235
Query: 260 DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQ 316
+ V +N MI G E + ++ + + +F + +CS G Q
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIH 295
Query: 317 AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNE 376
+K G V + ++MYS G V EA+ +F + ++ L WN M++ + + +
Sbjct: 296 CDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGY 355
Query: 377 TAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLMKVEVLNS-LI 432
+A+ + MR+ + PD FT +++ L + + VH+ L K + + S L+
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL 415
Query: 433 AAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALL--NTPLKPN 490
Y + G A +F ++ K +++W ++ISG NG + L+ F + + LKP+
Sbjct: 416 TLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPD 475
Query: 491 AYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFN 550
+ G QVHG +++ G + +G++L+ +Y+KCG + +L VF
Sbjct: 476 SDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFT 535
Query: 551 AMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVD 610
+M + ++WN++IS Y+++ + ++ F M +S GI PD + T VL A S +
Sbjct: 536 SMSTENMVAWNSMISCYSRNNLPELSIDLFNLM-LSQGIFPDSVSITSVLVAISSTASLL 594
Query: 611 DGTRIFDMMVNIYGFVPSVDHF-SCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSL-F 668
G + + + +PS H + ++D+ + G+ + AE + K S I W+L
Sbjct: 595 KGKSLHGYTLRLG--IPSDTHLKNALIDMYVKCGFSKYAENIFKK--MQHKSLITWNLMI 650
Query: 669 SACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNI--CAAAGQWEEAANLRDMMRE 723
+HG+ + + ++K +P LS I C +G EE N+ + M++
Sbjct: 651 YGYGSHGDC-ITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 453 YKSLISWNTIISGFLTNGCPLQGLEQFSALL-NTPLKPNAYXXXXXXXXXXXXXXXXHGK 511
Y S S N+ I + G LQ L +S ++P + + +GK
Sbjct: 21 YISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80
Query: 512 QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK-------RDTISWNALI 564
+HG ++ G+ + + +LV MY KCG LD ++ VF+ + RD WN++I
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI 140
Query: 565 SAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLV--DDGTRIFDMMV 620
Y + + KE V CF M + G+ PD + +IV+S G ++G +I M+
Sbjct: 141 DGYFKFRRFKEGVGCFRRMLVF-GVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFML 197
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/609 (32%), Positives = 322/609 (52%), Gaps = 29/609 (4%)
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDV--AFDLFRDMQKIGVRPDGYT 196
LG+V A FD + NR +V WN +I+ G +V F LF M G+ PD T
Sbjct: 99 LGNVALARHTFDHIQNR-DVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRT 155
Query: 197 FTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
F S+L C ++D G +H + ++ GF+ V SLI +Y V +A +F E+
Sbjct: 156 FPSVLKACRT-VID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP- 212
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGC 313
+RD ++NAMI G + ++A + ++ + T VS++S+C+ G
Sbjct: 213 -VRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGV 267
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQEN 373
+ SIK G ++ V+N + +Y+ FG++ + Q +F+RM RDL+SWN +I +
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY---E 324
Query: 374 LNET---AILTYLKMRRVGIEPDEFTY---GSLLGASDSLQVVEMVHSLLSKIG--LMKV 425
LNE AI + +MR I+PD T S+L ++ V + G L +
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI 384
Query: 426 EVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNT 485
+ N+++ Y + G ++ A +F+ LP +ISWNTIISG+ NG + +E ++ +
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE 444
Query: 486 -PLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
+ N G ++HG +L++G ++ + +L MY KCG L+
Sbjct: 445 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLED 504
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+L +F + + +++ WN LI+ + HG G++AV F+ M + G++PDH TF +LSACS
Sbjct: 505 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM-LDEGVKPDHITFVTLLSACS 563
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNIC 664
H GLVD+G F+MM YG PS+ H+ C+VD+ GR+G LE A + IK +++I
Sbjct: 564 HSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIW 623
Query: 665 WSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREF 724
+L SAC HGN+ LG++ + L E + + +VLLSN+ A+AG+WE +R +
Sbjct: 624 GALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGK 683
Query: 725 GTTKQPGCS 733
G K PG S
Sbjct: 684 GLRKTPGWS 692
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 150/600 (25%), Positives = 262/600 (43%), Gaps = 63/600 (10%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I + + N +++ R+ +E ++ F+ S L PD+ T + + A
Sbjct: 112 IQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL-------KACR 164
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
GN++H A++ G +VA SL+ LY++ + + + F E+ D SW M+S
Sbjct: 165 TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 224
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+ G+ +AL L NG R M D
Sbjct: 225 GYCQSGNAKEALTL----------------------SNG--------LRAM-------DS 247
Query: 195 YTFTSMLSLCSVELLDFGRHV--HSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
T S+LS C+ E DF R V HS I+ G + V N LI +Y G + D +VF
Sbjct: 248 VTVVSLLSACT-EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFV---SVMSSCSSL 309
+ +RD +++N++I ++ A +F++M+ + P T + S++S +
Sbjct: 307 RMY--VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364
Query: 310 RVGCQAQAQSIKTG-FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISM 368
R Q +++ G F + NA + MY+ G V+ A+ +F + D++SWN +IS
Sbjct: 365 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISG 424
Query: 369 FFQENLNETAILTYLKMRRVG-IEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGL-M 423
+ Q AI Y M G I ++ T+ S+L A + +L+ +H L K GL +
Sbjct: 425 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 484
Query: 424 KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALL 483
V V+ SL Y + GR+ AL +F +P + + WNT+I+ +G + + F +L
Sbjct: 485 DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 484 NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYI-LRHGFSSEISLGNALVTMYAKCGSL 542
+ +KP+ G+ + +G + + +V MY + G L
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQL 604
Query: 543 DGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLS 601
+ +L +M ++ D W AL+SA HG E + +EP+H + ++LS
Sbjct: 605 ETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL---FEVEPEHVGYHVLLS 661
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 191/426 (44%), Gaps = 43/426 (10%)
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTY-LKMRRV 388
++ + +Y G V A++ F+ ++ RD+ +WN+MIS + + + I + L M
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 389 GIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQI 447
G+ PD T+ S+L A ++ +H L K G M V V SLI Y R + A +
Sbjct: 148 GLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 448 FSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXX 507
F +P + + SWN +ISG+ +G + L L N ++
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEAL----TLSNGLRAMDSVTVVSLLSACTEAGDF 263
Query: 508 XHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAY 567
G +H Y ++HG SE+ + N L+ +YA+ G L VF+ M RD ISWN++I AY
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 568 AQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG-----------------LVD 610
+ Q A+ F+ M++S I+PD T + S S +G ++
Sbjct: 324 ELNEQPLRAISLFQEMRLSR-IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 611 DGT------------RIFDMMVNIYGFVPSVDHFS--CIVDLLGRSGYLEEAERLI---- 652
D T + D ++ ++P+ D S I+ ++G+ EA +
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 653 KGGYFGANSNICWSLFSACAAHGNLRLG-RMVARLLLEKDHNNPSVYVLLSNICAAAGQW 711
+ G AN S+ AC+ G LR G ++ RLL + + V L+++ G+
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 712 EEAANL 717
E+A +L
Sbjct: 503 EDALSL 508
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 526 ISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQI 585
+ + LV +Y G++ + F+ + RD +WN +IS Y + G E + CF +
Sbjct: 86 VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFML 145
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGR 641
S G+ PD+ TF VL AC V DG +I + + +GF+ V + ++ L R
Sbjct: 146 SSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALK-FGFMWDVYVAASLIHLYSR 197
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 207/720 (28%), Positives = 370/720 (51%), Gaps = 50/720 (6%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++ +++ E+L+ + ++ S + PD YT + I A A A G+ ++
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESK-VSPDKYTFPSVIKACAGLFDA----EMGDLVY 129
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+ G ++ V N+L+ +Y +R+G +
Sbjct: 130 EQILDMGFESDLFVGNALVDMY-------------------------------SRMGLLT 158
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML-S 202
A ++FD+MP R V+ WN++I+ + +G+ + A +++ +++ + PD +T +S+L +
Sbjct: 159 RARQVFDEMPVRDLVS-WNSLISGYSS-HGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Query: 203 LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
++ ++ G+ +H ++SG + V N L+ MY DA +VF E++ +RD V
Sbjct: 217 FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD--VRDSV 274
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQA---QS 319
+YN MI G ++++ E++ MF + F P T SV+ +C LR A+
Sbjct: 275 SYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
+K GF + V N + +Y+ G + A+++F ME +D VSWN +IS + Q A+
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAY 435
+ M + + D TY L+ S L ++ +HS K G+ + + V N+LI Y
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
+ G + +L+IFS++ ++WNT+IS + G GL+ + + + + P+
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
GK++H +LR G+ SE+ +GNAL+ MY+KCG L+ S VF M +R
Sbjct: 514 VTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR 573
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
D ++W +I AY +G+G++A+ F M+ S GI PD F ++ ACSH GLVD+G
Sbjct: 574 DVVTWTGMIYAYGMYGEGEKALETFADMEKS-GIVPDSVVFIAIIYACSHSGLVDEGLAC 632
Query: 616 FDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHG 675
F+ M Y P ++H++C+VDLL RS + +AE I+ +++I S+ AC G
Sbjct: 633 FEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSG 692
Query: 676 NLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
++ V+R ++E + ++P +L SN AA +W++ + +R +++ TK PG SWI
Sbjct: 693 DMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 265/518 (51%), Gaps = 16/518 (3%)
Query: 145 ALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC 204
+L +F ++ NV +WN+II R + NG A + + +++ V PD YTF S++ C
Sbjct: 58 SLSVFRRVSPAKNVYLWNSII-RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC 116
Query: 205 SVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
+ L D G V+ ++ GF + V N+L+ MY G + A QVF E+ +RD V
Sbjct: 117 A-GLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP--VRDLV 173
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQ---S 319
++N++I G E+A ++ +++ + P T SV+ + +L V Q Q +
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFA 233
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
+K+G ++ VNN + MY F + +A+ +F+ M+ RD VS+N MI + + + E ++
Sbjct: 234 LKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESV 293
Query: 380 LTYLKMRRVGIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIG-LMKVEVLNSLIAAY 435
+L+ +PD T S+L G L + + +++ + K G +++ V N LI Y
Sbjct: 294 RMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVY 352
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
+ G + A +F+++ K +SWN+IISG++ +G ++ ++ F ++ + +
Sbjct: 353 AKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYL 412
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
GK +H ++ G ++S+ NAL+ MYAKCG + SL +F++M
Sbjct: 413 MLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG 472
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
DT++WN +ISA + G + M+ S + PD ATF + L C+ + G I
Sbjct: 473 DTVTWNTVISACVRFGDFATGLQVTTQMRKSE-VVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 616 FDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
++ +G+ + + ++++ + G LE + R+ +
Sbjct: 532 HCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFE 568
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 224/479 (46%), Gaps = 14/479 (2%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
R +H++VI G + LI Y + + VF V ++ +N++I
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA-KNVYLWNSIIRAFS 82
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTA 329
+ +A + ++++ SP + TF SV+ +C+ L +G Q + GF++
Sbjct: 83 KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
V NA + MYS G + A+ +F+ M RDLVSWN +IS + E A+ Y +++
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 390 IEPDEFTYGSLLGASDSLQVVEMVHSL----LSKIGLMKVEVLNSLIAAYCRNGRINWAL 445
I PD FT S+L A +L VV+ L L V V N L+A Y + R A
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 446 QIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXX 505
++F + + +S+NT+I G+L + + F L+ KP+
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLR 321
Query: 506 XXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALIS 565
K ++ Y+L+ GF E ++ N L+ +YAKCG + + VFN+M +DT+SWN++IS
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 566 AYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGF 625
Y Q G EA+ F+ M I + DH T+ +++S + + + G + + G
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKFGKGLHSNGIK-SGI 439
Query: 626 VPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SLFSACAAHGNLRLGRMV 683
+ + ++D+ + G + ++ ++ G + W ++ SAC G+ G V
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSS--MGTGDTVTWNTVISACVRFGDFATGLQV 496
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 211/695 (30%), Positives = 333/695 (47%), Gaps = 49/695 (7%)
Query: 52 LRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDL 111
L P TL +T + R G +H IRTG AN L++ YAK L
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVA----GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 112 ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD 171
A F I D SW ++++ ++ G + + +
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQ--------------------- 104
Query: 172 NGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL-CSVELLDFGRHVHSVVIRSGFLARTSV 230
LFR+M+ + P+ YT + S++ GR H++V++ V
Sbjct: 105 ---------LFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYV 155
Query: 231 VNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM--Q 288
SL+ MY G V D +VF + R+ T++ M+ G R E+A +F +
Sbjct: 156 DTSLVGMYCKAGLVEDGLKVFAYMPE--RNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE 213
Query: 289 KACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVN 345
K S + F +V+SS ++ + +G Q +IK G + A++NA +TMYS +N
Sbjct: 214 KEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLN 273
Query: 346 EAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASD 405
EA +F+ +R+ ++W+ M++ + Q + A+ + +M GI+P E+T +L A
Sbjct: 274 EACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACS 333
Query: 406 SLQVVE---MVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNT 461
+ +E +HS L K+G + + +L+ Y + G + A + F L + + W +
Sbjct: 334 DICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS 393
Query: 462 IISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG 521
+ISG++ N + L + + + PN GKQVHG+ ++HG
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHG 453
Query: 522 FSSEISLGNALVTMYAKCGSL-DGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCF 580
F E+ +G+AL TMY+KCGSL DG+L VF +D +SWNA+IS + +GQG EA+ F
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNL-VFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 581 EAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLG 640
E M ++ G+EPD TF ++SACSH G V+ G F+MM + G P VDH++C+VDLL
Sbjct: 513 EEM-LAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLS 571
Query: 641 RSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVL 700
R+G L+EA+ I+ + L SAC HG LG L+ S YV
Sbjct: 572 RAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQ 631
Query: 701 LSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
LS I A G+ + + MR G +K+ GCSWI
Sbjct: 632 LSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 230/459 (50%), Gaps = 46/459 (10%)
Query: 40 LKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVAN 99
++LF ++ + L P+ YTL+ A ++ + ++T G Q HA ++ +V
Sbjct: 103 MQLFREMRAQDIL-PNAYTLAGIFKAESSLQ----SSTVGRQAHALVVKMSSFGDIYVDT 157
Query: 100 SLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVA 159
SL+ +Y KA + + FA + + Y+W+TM+S G V +A+K+
Sbjct: 158 SLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV----------- 206
Query: 160 VWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML-SLCSVELLDFGRHVHSV 218
F+LF ++ G D Y FT++L SL + + GR +H +
Sbjct: 207 -------------------FNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCI 246
Query: 219 VIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNE 278
I++G L ++ N+L+TMY C + +A ++F +G R+ +T++AM+ G + +
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFD--SSGDRNSITWSAMVTGYSQNGESL 304
Query: 279 DAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNATM 335
+A +F M A P E T V V+++CS L G Q + +K GF+ + A +
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALV 364
Query: 336 TMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEF 395
MY+ G + +A+ F+ ++ERD+ W +IS + Q + NE A++ Y +M+ GI P++
Sbjct: 365 DMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDP 424
Query: 396 TYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNL 451
T S+L A SL +E+ VH K G ++V + ++L Y + G + +F
Sbjct: 425 TMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRT 484
Query: 452 PYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
P K ++SWN +ISG NG + LE F +L ++P+
Sbjct: 485 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPD 523
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
L++ +++ + E+L L+ ++ ++ + P+ T+++ + A + + G Q+H H
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGII-PNDPTMASVLKACS----SLATLELGKQVHGH 448
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
I+ G + ++L ++Y+K L F D SW M+S + G +A
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508
Query: 146 LKLFDQM----PNRSNVAVWNAIITRCGADNGHDDVAFDLFRDM-QKIGVRPDGYTFTSM 200
L+LF++M +V N II+ C + G + + F M +IG+ P + M
Sbjct: 509 LELFEEMLAEGMEPDDVTFVN-IISAC-SHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566
Query: 201 LSLCS 205
+ L S
Sbjct: 567 VDLLS 571
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 311 bits (798), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 191/626 (30%), Positives = 322/626 (51%), Gaps = 26/626 (4%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAII---TRCGADNGHDDVAFDL 181
+++ ++++ A G + KLFD++ + V +WN ++ +CGA D
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCV-IWNVMLNGYAKCGAL----DSVIKG 226
Query: 182 FRDMQKIGVRPDGYTFTSMLSLCSVELL-DFGRHVHSVVIRSGFLARTSVVNSLITMYFN 240
F M+ + P+ TF +LS+C+ +LL D G +H +V+ SG S+ NSL++MY
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK 286
Query: 241 CGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFV 300
CG DA ++F + D VT+N MI G V+ E++ F +M + P TF
Sbjct: 287 CGRFDDASKLFRMMSRA--DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFS 344
Query: 301 SVMSSCSSL-------RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
S++ S S ++ C SI +A+ +A + C G V+ AQNIF +
Sbjct: 345 SLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDA---YFKCRG-VSMAQNIFSQ 400
Query: 354 MEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVV 410
D+V + MIS + L ++ + + +V I P+E T S+L G +L++
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 411 EMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
+H + K G + + ++I Y + GR+N A +IF L + ++SWN++I+ +
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG 529
P ++ F + + + + GK +HG++++H +S++
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE 580
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
+ L+ MYAKCG+L ++ VF M +++ +SWN++I+A HG+ K+++C F M GI
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 590 EPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
PD TF ++S+C HVG VD+G R F M YG P +H++C+VDL GR+G L EA
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 650 RLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAG 709
+K F ++ + +L AC H N+ L + + L++ D +N YVL+SN A A
Sbjct: 701 ETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAR 760
Query: 710 QWEEAANLRDMMREFGTTKQPGCSWI 735
+WE +R +M+E K PG SWI
Sbjct: 761 EWESVTKVRSLMKEREVQKIPGYSWI 786
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 176/665 (26%), Positives = 299/665 (44%), Gaps = 53/665 (7%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G Q+HA I + S+ +L +YA
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMC------------------------------ 83
Query: 139 LGHVGDALKLFDQMP-NRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
G D K+F ++ RS++ WN+II+ NG + A + M GV PD TF
Sbjct: 84 -GSFSDCGKMFYRLDLRRSSIRPWNSIISS-FVRNGLLNQALAFYFKMLCFGVSPDVSTF 141
Query: 198 TSMLSLCSVELLDF-GRHVHSVVIRS-GFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
++ C V L +F G S + S G V +SLI Y G + ++F V
Sbjct: 142 PCLVKAC-VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVL 200
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVG 312
+D V +N M++G + + F M+ SP TF V+S C+S + +G
Sbjct: 201 Q--KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG 258
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
Q + +G D ++ N+ ++MYS G+ ++A +F M D V+WN MIS + Q
Sbjct: 259 VQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGL-MKVEVL 428
L E ++ + +M G+ PD T+ SLL + ++L+ + +H + + + + + +
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
++LI AY + ++ A IFS ++ + +ISG+L NG + LE F L+ +
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
PN G+++HG+I++ GF + ++G A++ MYAKCG ++ + +
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 549 FNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGL 608
F + KRD +SWN++I+ AQ A+ F M +S GI D + + LSAC+++
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS-GICYDCVSISAALSACANLPS 557
Query: 609 VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SL 667
G I M+ + V S ++D+ + G L+ A + K + + W S+
Sbjct: 558 ESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKT--MKEKNIVSWNSI 614
Query: 668 FSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNI--CAAAGQWEEAAN-LRDMMREF 724
+AC HG L+ + ++EK P L I C G +E R M ++
Sbjct: 615 IAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDY 674
Query: 725 GTTKQ 729
G Q
Sbjct: 675 GIQPQ 679
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 219/476 (46%), Gaps = 14/476 (2%)
Query: 200 MLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
+L CS LL G+ VH+ +I + + ++ MY CG D ++F ++
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR--VGCQAQ 316
+N++I VR A + M SP +TF ++ +C +L+ G
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 317 AQSIKT-GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
+ ++ + G D V ++ + Y +GK++ +F+R+ ++D V WN+M++ + +
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSL 431
++ I + MR I P+ T+ +L S ++++ +H L+ G+ + + NSL
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 432 IAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
++ Y + GR + A ++F + ++WN +ISG++ +G + L F ++++ + P+A
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 492 YXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNA 551
+ KQ+H YI+RH S +I L +AL+ Y KC + + +F+
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 552 MVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDD 611
D + + A+IS Y +G +++ F + + I P+ T +L + +
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL-VKVKISPNEITLVSILPVIGILLALKL 459
Query: 612 GTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA----ERLIKGGYFGANSNI 663
G + ++ GF + ++D+ + G + A ERL K NS I
Sbjct: 460 GRELHGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+S I+ N ++ +S+ + ++ +F Q+ S D ++S A++A AN
Sbjct: 502 LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY-DCVSISAALSACANL----P 556
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
+ +FG +H I+ L + + ++L+ +YAK +L + F ++ + SW ++++
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 135 ASTRLGHVGDALKLFDQMPNRSNV----AVWNAIITRCGADNGHDDVAFDLFRDM-QKIG 189
A G + D+L LF +M +S + + II+ C G D FR M + G
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSC-CHVGDVDEGVRFFRSMTEDYG 675
Query: 190 VRPDGYTFTSMLSLCSVELLDFGR 213
++P + C V+L FGR
Sbjct: 676 IQPQQEHYA-----CVVDL--FGR 692
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 311/599 (51%), Gaps = 21/599 (3%)
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFD---LFRDMQKIGVRPDGYTFTSM 200
DA ++F +M RS + WN ++ + ++V + +FRD +K PD +T
Sbjct: 12 DARQMFGEMTKRS-LYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEK----PDNFTLPVA 66
Query: 201 LSLC-SVELLDFGRHVHSVVIRSGFLARTSVV-NSLITMYFNCGCVVDAYQVFGEVEAGL 258
L C + +++G +H V + L V +SLI MY CG +++A ++F E+E
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP- 125
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC-FSPMEATFVSVMSSCSSL---RVGCQ 314
D VT+++M+ G + A FR M A +P T ++++S+C+ L R+G
Sbjct: 126 -DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 315 AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENL 374
I+ GF ++ N+ + Y+ EA N+F+ + E+D++SW+ +I+ + Q
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIGL-MKVEVLNS 430
A+L + M G EP+ T +L A+ L+ H L + GL +V+V +
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 431 LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFS-ALLNTPLKP 489
L+ Y + A +FS +P K ++SW +ISGF NG + +E+FS LL +P
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 490 NAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVF 549
+A K H Y++++GF S +G +LV +Y++CGSL + VF
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 550 NAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLV 609
N + +DT+ W +LI+ Y HG+G +A+ F M S ++P+ TF +LSACSH GL+
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 610 DDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFS 669
+G RIF +MVN Y P+++H++ +VDLLGR G L+ A + K F I +L
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLG 544
Query: 670 ACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTK 728
AC H N + VA+ L E + N+ Y+L+SN+ G+WE LR+ +++ G K
Sbjct: 545 ACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 603
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 223/496 (44%), Gaps = 53/496 (10%)
Query: 7 SRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITAS 66
+RQM ++ + + N LL +L+R Q E L F+ + +PD++TL A+ A
Sbjct: 13 ARQM-FGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKAC 70
Query: 67 ANTRPAATATTFGNQLHAHAIR-TGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPD 125
R +G +H + L + +V +SL+ +Y K + R F E+E PD
Sbjct: 71 GELR----EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 126 DYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDM 185
+W++M+S + G A++ F +M S+V
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVT-------------------------- 160
Query: 186 QKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCV 244
PD T +++S C+ + GR VH VIR GF S+VNSL+ Y
Sbjct: 161 ------PDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214
Query: 245 VDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
+A +F + +D ++++ +I V+ +A ++F DM P AT + V+
Sbjct: 215 KEAVNLFKMIAE--KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQ 272
Query: 305 SCSS---LRVGCQAQAQSIKTGFDAYTAVNNATMTMY-SCFGKVNEAQNIFERMEERDLV 360
+C++ L G + +I+ G + V+ A + MY CF EA +F R+ +D+V
Sbjct: 273 ACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSP-EEAYAVFSRIPRKDVV 331
Query: 361 SWNIMISMFFQENLNETAILTY-LKMRRVGIEPDEFTYGSLLGASDSLQVVEMV---HSL 416
SW +IS F + +I + + + PD +LG+ L +E HS
Sbjct: 332 SWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSY 391
Query: 417 LSKIGLMKVEVLN-SLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
+ K G + SL+ Y R G + A ++F+ + K + W ++I+G+ +G +
Sbjct: 392 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKA 451
Query: 476 LEQFSALL-NTPLKPN 490
LE F+ ++ ++ +KPN
Sbjct: 452 LETFNHMVKSSEVKPN 467
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 188/399 (47%), Gaps = 13/399 (3%)
Query: 341 FGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSL 400
F +A+ +F M +R L WN ++ +E E + + M R +PD FT
Sbjct: 7 FSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVA 66
Query: 401 LGASDSLQVV---EMVHSLLSKIGLM--KVEVLNSLIAAYCRNGRINWALQIFSNLPYKS 455
L A L+ V EM+H + K + + V +SLI Y + GR+ AL++F L
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 456 LISWNTIISGFLTNGCPLQGLEQFSAL-LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVH 514
+++W++++SGF NG P Q +E F + + + + P+ G+ VH
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 515 GYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGK 574
G+++R GFS+++SL N+L+ YAK + ++ +F + ++D ISW+ +I+ Y Q+G
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 575 EAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSC 634
EA+ F M + G EP+ AT VL AC+ ++ G + ++ + G V +
Sbjct: 247 EALLVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTA 304
Query: 635 IVDLLGRSGYLEEAERLIKGGYFGANSNICW-SLFSACAAHGNLRLGRMVARLLLEKDHN 693
+VD+ + EEA + + W +L S +G ++L +++
Sbjct: 305 LVDMYMKCFSPEEAYAVF--SRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 694 NPSVYVLLSNI--CAAAGQWEEAANLRDMMREFGTTKQP 730
P +++ + C+ G E+A + ++G P
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 214/700 (30%), Positives = 354/700 (50%), Gaps = 55/700 (7%)
Query: 52 LRP-DHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAED 110
+RP D T S+ + + R G +HA I ++ S + NSL+SLY+K+ D
Sbjct: 57 IRPMDSVTFSSLLKSCIRARD----FRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGD 112
Query: 111 LASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGA 170
A E F + R G + +V W+A++ C
Sbjct: 113 SAKAEDVFETMR---------------RFG--------------KRDVVSWSAMMA-CYG 142
Query: 171 DNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSG-FLART 228
+NG + A +F + ++G+ P+ Y +T+++ CS + + GR ++++G F +
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 229 SVVNSLITMYFNC-GCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
V SLI M+ +AY+VF ++ + VT+ MI +++ +A F DM
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSE--LNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 288 QKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMY---SCF 341
+ F + T SV S+C+ L +G Q + +I++G V + + MY S
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSAD 318
Query: 342 GKVNEAQNIFERMEERDLVSWNIMISMFFQE-NLNETAILTYLKMRRVG-IEPDEFTYGS 399
G V++ + +F+RME+ ++SW +I+ + + NL AI + +M G +EP+ FT+ S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 400 LLGASDSL---QVVEMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKS 455
A +L +V + V K GL V NS+I+ + ++ R+ A + F +L K+
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 456 LISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHG 515
L+S+NT + G N Q + S + L +A+ G+Q+H
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 516 YILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKE 575
+++ G S + NAL++MY+KCGS+D + VFN M R+ ISW ++I+ +A+HG
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIR 558
Query: 576 AVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCI 635
+ F M I G++P+ T+ +LSACSHVGLV +G R F+ M + P ++H++C+
Sbjct: 559 VLETFNQM-IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 636 VDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNP 695
VDLL R+G L +A I F A+ + + AC H N LG++ AR +LE D N P
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 696 SVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ Y+ LSNI A AG+WEE+ +R M+E K+ GCSWI
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 130/275 (47%), Gaps = 40/275 (14%)
Query: 34 NQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKA 93
N TE++ LF+++ + + P+H+T S+A A N + G Q+ A + GL +
Sbjct: 351 NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL----SDPRVGKQVLGQAFKRGLAS 406
Query: 94 HSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMP 153
+S VANS++S++ K++ + +RAF + + S+ T L + R + A KL ++
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 154 NRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFG 212
R ++GV +TF S+LS + +V + G
Sbjct: 467 ER-------------------------------ELGV--SAFTFASLLSGVANVGSIRKG 493
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
+HS V++ G V N+LI+MY CG + A +VF +E R+ +++ +MI G
Sbjct: 494 EQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN--RNVISWTSMITGFA 551
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
+ F M + P E T+V+++S+CS
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACS 586
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 147/357 (41%), Gaps = 80/357 (22%)
Query: 9 QMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASAN 68
Q + ++S + ++ N L R+ ++ KL ++I + L +T ++ ++ AN
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI-TERELGVSAFTFASLLSGVAN 486
Query: 69 TRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYS 128
+ G Q+H+ ++ GL + V N+L+S+Y+K + + R F +E + S
Sbjct: 487 V----GSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS 542
Query: 129 WTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI 188
WT+M++ + G L+ F+QM
Sbjct: 543 WTSMITGFAKHGFAIRVLETFNQMIEE--------------------------------- 569
Query: 189 GVRPDGYTFTSMLSLCS-VELLDFG-RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
GV+P+ T+ ++LS CS V L+ G RH +S MY +
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNS-------------------MY-------E 603
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC 306
+++ ++E Y M+D L R DAF M + TF+
Sbjct: 604 DHKIKPKME-------HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656
Query: 307 SSLRVGCQAQAQSIKTGFD---AYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLV 360
S+ +G A + ++ + AY ++N +Y+C GK E+ + +M+ER+LV
Sbjct: 657 SNTELGKLAARKILELDPNEPAAYIQLSN----IYACAGKWEESTEMRRKMKERNLV 709
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 310/606 (51%), Gaps = 15/606 (2%)
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI--GVRPDGYTF 197
G++ A ++FD+MP+ ++ W +II R N D+ A LF M+ + V PD
Sbjct: 54 GNLRAARQVFDKMPH-GDIVSWTSIIKRYVTANNSDE-ALILFSAMRVVDHAVSPDTSVL 111
Query: 198 TSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
+ +L C + +G +H+ +++ L+ V +SL+ MY G + + +VF E+
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP- 170
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGC 313
R+ VT+ A+I GLV R ++ F +M ++ TF + +C+ LR G
Sbjct: 171 -FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQEN 373
I GF V N+ TMY+ G++ + +FE M ERD+VSW +I + +
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 374 LNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLM-KVEVLN 429
A+ T++KMR + P+E T+ S+ A SL + E +H + +GL + V N
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 430 SLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKP 489
S++ Y G + A +F + + +ISW+TII G+ G +G + FS + + KP
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
Query: 490 NAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVF 549
+ G+QVH L G ++ ++L+ MY+KCGS+ + +F
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIF 469
Query: 550 NAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLV 609
+ D +S A+I+ YA+HG+ KEA+ FE + G PD TF VL+AC+H G +
Sbjct: 470 GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK-SLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 610 DDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFS 669
D G F+MM Y P+ +H+ C+VDLL R+G L +AE++I + + + +L
Sbjct: 529 DLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLI 588
Query: 670 ACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQ 729
AC A G++ GR A +LE D + V L+NI ++ G EEAAN+R M+ G K+
Sbjct: 589 ACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE 648
Query: 730 PGCSWI 735
PG S I
Sbjct: 649 PGWSSI 654
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 217/481 (45%), Gaps = 48/481 (9%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHS-SHTLRPDHYTLSTAITASANTRPAATATTF 78
I+ ++ +N E+L LF+ + H + PD LS + A + A +
Sbjct: 71 IVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA----Y 126
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G LHA+A++T L + +V +SLL +Y R
Sbjct: 127 GESLHAYAVKTSLLSSVYVGSSLLDMY-------------------------------KR 155
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
+G + + ++F +MP R N W AIIT G F +M + D YTF
Sbjct: 156 VGKIDKSCRVFSEMPFR-NAVTWTAIITGL-VHAGRYKEGLTYFSEMSRSEELSDTYTFA 213
Query: 199 SMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
L C+ + + +G+ +H+ VI GF+ V NSL TMY CG + D +F +
Sbjct: 214 IALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE- 272
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQ 314
RD V++ ++I R+ + A F M+ + P E TF S+ S+C+SL G Q
Sbjct: 273 -RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQ 331
Query: 315 AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENL 374
+ G + +V+N+ M MYS G + A +F+ M RD++SW+ +I + Q
Sbjct: 332 LHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGF 391
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLLSKIGLMK-VEVLNS 430
E + MR+ G +P +F SLL S ++ V+E VH+L GL + V +S
Sbjct: 392 GEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSS 451
Query: 431 LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
LI Y + G I A IF ++S +I+G+ +G + ++ F L +P+
Sbjct: 452 LINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPD 511
Query: 491 A 491
+
Sbjct: 512 S 512
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 162/367 (44%), Gaps = 64/367 (17%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+S ++ L+ R Q ++++ F ++ +S + P+ T ++ +A A + +
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQ-VPPNEQTFASMFSACA----SLS 324
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
+G QLH + + GL V+NS++ +Y+ +L S F + D SW+T++
Sbjct: 325 RLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIG 384
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+ G + K F W M++ G +P
Sbjct: 385 GYCQAGFGEEGFKYFS----------W-----------------------MRQSGTKPTD 411
Query: 195 YTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
+ S+LS+ ++ +++ GR VH++ + G ++V +SLI MY CG + +A +FGE
Sbjct: 412 FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC 313
+ D V+ AMI+G ++++A +F K F P TF+SV+++C+
Sbjct: 472 TDRD--DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACT------ 523
Query: 314 QAQAQSIKTGFDAYTAVNNATMTM------YSCF-------GKVNEAQNIFERME-ERDL 359
+ + GF Y + T M Y C G++++A+ + M ++D
Sbjct: 524 --HSGQLDLGFH-YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDD 580
Query: 360 VSWNIMI 366
V W ++
Sbjct: 581 VVWTTLL 587
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL--LNT 485
L SLI A G + A Q+F +P+ ++SW +II ++T + L FSA+ ++
Sbjct: 47 LRSLINA----GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDH 102
Query: 486 PLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGS 545
+ P+ +G+ +H Y ++ S + +G++L+ MY + G +D S
Sbjct: 103 AVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 546 LGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSH 605
VF+ M R+ ++W A+I+ G+ KE + F M S + D TF I L AC+
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYTFAIALKACAG 221
Query: 606 VGLVDDGTRIFDMMVNIYGFVPSV 629
+ V G I ++ + GFV ++
Sbjct: 222 LRQVKYGKAIHTHVI-VRGFVTTL 244
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 131/328 (39%), Gaps = 80/328 (24%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHV 97
E K F+ + S T +P + L++ ++ S N G Q+HA A+ GL+ +S V
Sbjct: 394 EGFKYFSWMRQSGT-KPTDFALASLLSVSGNM----AVIEGGRQVHALALCFGLEQNSTV 448
Query: 98 ANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSN 157
+SL+++Y+K + F E + D S T M++ G +A+
Sbjct: 449 RSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAI----------- 497
Query: 158 VAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVE-LLDFGRHVH 216
DLF K+G RPD TF S+L+ C+ LD G H
Sbjct: 498 ----------------------DLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH-- 533
Query: 217 SVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDR 276
YFN + + Y + ++H Y M+D L R R
Sbjct: 534 ---------------------YFN--MMQETYNM-----RPAKEH--YGCMVDLLCRAGR 563
Query: 277 NEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNA 333
DA M +M + + + +++ +C + + G +A + ++ D A
Sbjct: 564 LSDAEKMINEMS---WKKDDVVWTTLLIACKAKGDIERGRRAAERILE--LDPTCATALV 618
Query: 334 TMT-MYSCFGKVNEAQNIFERMEERDLV 360
T+ +YS G + EA N+ + M+ + ++
Sbjct: 619 TLANIYSSTGNLEEAANVRKNMKAKGVI 646
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 198/623 (31%), Positives = 302/623 (48%), Gaps = 80/623 (12%)
Query: 188 IGVRPDGYTFTSMLSL-CSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
G +P + ++ + C L++ R + + +ART++V+ Y G +
Sbjct: 43 FGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG----YCASGDITL 98
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC 306
A VF + +RD V YNAMI G + A +F M+ F P TF SV++
Sbjct: 99 ARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGL 158
Query: 307 SSL----RVGCQAQAQSIKTGFDAYTAVNNATMTMYS-CFGK---VNEAQNIFERMEERD 358
+ + + Q A ++K+G T+V+NA +++YS C ++ A+ +F+ + E+D
Sbjct: 159 ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKD 218
Query: 359 --------------------------------LVSWNIMISMFFQENLNETAILTYLKMR 386
LV++N MIS + + A+ +M
Sbjct: 219 ERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMV 278
Query: 387 RVGIEPDEFTYGSLLGASDS---LQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINW 443
GIE DEFTY S++ A + LQ+ + VH+ + + NSL++ Y + G+ +
Sbjct: 279 SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDE 338
Query: 444 ALQIFSNLPYKSLISWNTIISGFLT-------------------------------NGCP 472
A IF +P K L+SWN ++SG+++ NG
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFG 398
Query: 473 LQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNAL 532
+GL+ FS + +P Y +G+Q H +L+ GF S +S GNAL
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNAL 458
Query: 533 VTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPD 592
+TMYAKCG ++ + VF M D++SWNALI+A QHG G EAV +E M + GI PD
Sbjct: 459 ITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM-LKKGIRPD 517
Query: 593 HATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI 652
T VL+ACSH GLVD G + FD M +Y P DH++ ++DLL RSG +AE +I
Sbjct: 518 RITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 653 KGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWE 712
+ F + I +L S C HGN+ LG + A L + Y+LLSN+ AA GQWE
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWE 637
Query: 713 EAANLRDMMREFGTTKQPGCSWI 735
E A +R +MR+ G K+ CSWI
Sbjct: 638 EVARVRKLMRDRGVKKEVACSWI 660
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 223/492 (45%), Gaps = 53/492 (10%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++ + +N ++ LF ++ +PD++T ++ + A Q H
Sbjct: 117 NAMITGFSHNNDGYSAINLFCKM-KHEGFKPDNFTFASVLAGLALVADDEKQCV---QFH 172
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAED----LASVERAFAEIEYPDDYSWTTMLSASTRL 139
A A+++G + V+N+L+S+Y+K L S + F EI D+ SWTTM++ +
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTS 199
G+ +L + M + + +NA+I+ + G A ++ R M G+ D +T+ S
Sbjct: 233 GYFDLGEELLEGMDDNMKLVAYNAMISGY-VNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 200 MLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
++ C+ LL G+ VH+ V+R + NSL+++Y+ CG +A +F ++ A
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPA-- 348
Query: 259 RDHVTYNA-------------------------------MIDGLVRVDRNEDAFVMFRDM 287
+D V++NA MI GL E+ +F M
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCM 408
Query: 288 QKACFSPMEATFVSVMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMTMYSCFGKV 344
++ F P + F + SC+ L C Q AQ +K GFD+ + NA +TMY+ G V
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVV 468
Query: 345 NEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS 404
EA+ +F M D VSWN +I+ Q A+ Y +M + GI PD T ++L A
Sbjct: 469 EEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528
Query: 405 DSLQVVEMVHSLLSKIGLM-----KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS- 458
+V+ + + + LI CR+G+ + A + +LP+K
Sbjct: 529 SHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEI 588
Query: 459 WNTIISGFLTNG 470
W ++SG +G
Sbjct: 589 WEALLSGCRVHG 600
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 153/631 (24%), Positives = 270/631 (42%), Gaps = 97/631 (15%)
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
T+ +H + I G + +H+ N L+ +Y K+ +L + F EI PD + TTM+
Sbjct: 28 TSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMV 87
Query: 134 SASTRLGHVGDALKLFDQMP-NRSNVAVWNAIITRCGADNGHDDV-AFDLFRDMQKIGVR 191
S G + A +F++ P + ++NA+IT G + +D A +LF M+ G +
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMIT--GFSHNNDGYSAINLFCKMKHEGFK 145
Query: 192 PDGYTFTSMLSLCSVELLDFGRHV--HSVVIRSGFLARTSVVNSLITMYFNC-------- 241
PD +TF S+L+ ++ D + V H+ ++SG TSV N+L+++Y C
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 242 ----------------------GCVVDAYQVFG-EVEAGLRDH---VTYNAMIDGLVRVD 275
G V + Y G E+ G+ D+ V YNAMI G V
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 276 RNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNN 332
++A M R M + E T+ SV+ +C++ L++G Q A ++ D +N
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDN 324
Query: 333 ATMTMYSCFGKVNEAQNIFERMEERDLVSWN----------------------------- 363
+ +++Y GK +EA+ IFE+M +DLVSWN
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 364 --IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV------EMVHS 415
IMIS + E + + M+R G EP ++ + GA S V+ + H+
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFS---GAIKSCAVLGAYCNGQQYHA 441
Query: 416 LLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQ 474
L KIG + N+LI Y + G + A Q+F +P +SWN +I+ +G +
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501
Query: 475 GLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG----N 530
++ + +L ++P+ G++ Y I G
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK---YFDSMETVYRIPPGADHYA 558
Query: 531 ALVTMYAKCGSLDGSLGVFNAMVKRDTIS-WNALISAYAQHGQGKEAVCCFEAMQISPGI 589
L+ + + G + V ++ + T W AL+S HG + + + + G+
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF---GL 615
Query: 590 EPDH-ATFTIVLSACSHVGLVDDGTRIFDMM 619
P+H T+ ++ + + G ++ R+ +M
Sbjct: 616 IPEHDGTYMLLSNMHAATGQWEEVARVRKLM 646
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 169/360 (46%), Gaps = 26/360 (7%)
Query: 19 QILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTF 78
+++ N +++ + E+L++ ++ SS + D +T + I A A A
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSS-GIELDEFTYPSVIRACAT----AGLLQL 304
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G Q+HA+ +R H NSL+SLY K F ++ D SW +LS
Sbjct: 305 GKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS 363
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
GH+G+A +F +M + N+ W +I+ A+NG + LF M++ G P Y F+
Sbjct: 364 SGHIGEAKLIFKEMKEK-NILSWMIMISGL-AENGFGEEGLKLFSCMKREGFEPCDYAFS 421
Query: 199 SMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
+ C+V L + G+ H+ +++ GF + S N+LITMY CG V +A QVF +
Sbjct: 422 GAIKSCAV-LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC 480
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQ 316
D V++NA+I L + +A ++ +M K P T ++V+++CS + Q +
Sbjct: 481 --LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
Query: 317 --------AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS-WNIMIS 367
I G D Y + + + GK ++A+++ E + + W ++S
Sbjct: 539 KYFDSMETVYRIPPGADHYARL----IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 153/402 (38%), Gaps = 100/402 (24%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + IL +++ L + E LKLF+ + P Y S AI + A
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCM-KREGFEPCDYAFSGAIKSCA----VLG 431
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A G Q HA ++ G + N+L+++YAK + + F + D SW +++
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
A + GH GA+ A D++ +M K G+RPD
Sbjct: 492 ALGQHGH---------------------------GAE------AVDVYEEMLKKGIRPDR 518
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
T ++L+ CS L+D GR YF D+ +
Sbjct: 519 ITLLTVLTACSHAGLVDQGRK-----------------------YF------DSMETVYR 549
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLR 310
+ G DH Y +ID L R + DA + + F P + +++S C ++
Sbjct: 550 IPPGA-DH--YARLIDLLCRSGKFSDAESVIESLP---FKPTAEIWEALLSGCRVHGNME 603
Query: 311 VGCQAQAQ---SIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL-----VSW 362
+G A + I Y ++N M++ G+ E + + M +R + SW
Sbjct: 604 LGIIAADKLFGLIPEHDGTYMLLSN----MHAATGQWEEVARVRKLMRDRGVKKEVACSW 659
Query: 363 NIMISMFFQENLNET------AILTYLK-----MRRVGIEPD 393
M + +++T A+ YL+ MRR+G PD
Sbjct: 660 IEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPD 701
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 316/601 (52%), Gaps = 14/601 (2%)
Query: 145 ALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGV-RPDGYTFTSMLSL 203
A +F+ RS+V +WN++++ ++ D ++F+ + + PD +TF +++
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHD-TLEVFKRLLNCSICVPDSFTFPNVIKA 116
Query: 204 CSVELLDF-GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
+F GR +H++V++SG++ V +SL+ MY ++ QVF E+ RD
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE--RDVA 174
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQS 319
++N +I + E A +F M+ + F P + +S+CS L G + +
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
+K GF+ VN+A + MY + A+ +F++M + LV+WN MI + + +++ +
Sbjct: 235 VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCV 294
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVHS-LLSKIGLMKVEVLNSLIAAY 435
+M G P + T S+L A S +L + +H ++ + + V SLI Y
Sbjct: 295 EILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLY 354
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
+ G N A +FS SWN +IS +++ G + +E + +++ +KP+
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
GKQ+H I ++ L +AL+ MY+KCG+ + +FN++ K+
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
D +SW +ISAY HGQ +EA+ F+ MQ G++PD T VLSAC H GL+D+G +
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQ-KFGLKPDGVTLLAVLSACGHAGLIDEGLKF 533
Query: 616 FDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKG-GYFGANSNICWSLFSACAAH 674
F M + YG P ++H+SC++D+LGR+G L EA +I+ N+ + +LFSAC H
Sbjct: 534 FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLH 593
Query: 675 GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
LG +ARLL+E ++ S Y++L N+ A+ W+ A +R M+E G K+PGCSW
Sbjct: 594 LEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSW 653
Query: 735 I 735
I
Sbjct: 654 I 654
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 220/475 (46%), Gaps = 18/475 (3%)
Query: 215 VHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRV 274
VH ++ G + SLI +YF C A VF + D +N+++ G +
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR-SDVYIWNSLMSGYSKN 84
Query: 275 DRNEDAFVMFRDMQKACFS-PMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAV 330
D +F+ + P TF +V+ + +L +G +K+G+ V
Sbjct: 85 SMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVV 144
Query: 331 NNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGI 390
++ + MY+ F + +F+ M ERD+ SWN +IS F+Q E A+ + +M G
Sbjct: 145 ASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGF 204
Query: 391 EPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGLMKVEVLNS-LIAAYCRNGRINWALQ 446
EP+ + + A L +E +H K G E +NS L+ Y + + A +
Sbjct: 205 EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 447 IFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXX 506
+F +P KSL++WN++I G++ G +E + ++ +P+
Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN 324
Query: 507 XXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISA 566
HGK +HGY++R +++I + +L+ +Y KCG + + VF+ K SWN +IS+
Sbjct: 325 LLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISS 384
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
Y G +AV ++ M +S G++PD TFT VL ACS + ++ G +I ++I
Sbjct: 385 YISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQLAALEKGKQIH---LSISESR 440
Query: 627 PSVDH--FSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWS-LFSACAAHGNLR 678
D S ++D+ + G +EA R+ + W+ + SA +HG R
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNS--IPKKDVVSWTVMISAYGSHGQPR 493
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 218/476 (45%), Gaps = 47/476 (9%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N L++ ++++ ++L++F ++ + PD +T I A A G +H
Sbjct: 75 NSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYG----ALGREFLGRMIH 130
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+++G VA+SL+ +YAK + + F E+ D SW T++S + G
Sbjct: 131 TLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAE 190
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
AL+LF +M + G P+ + T +S
Sbjct: 191 KALELFGRMESS---------------------------------GFEPNSVSLTVAISA 217
Query: 204 CSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
CS L L+ G+ +H ++ GF V ++L+ MY C C+ A +VF ++ + V
Sbjct: 218 CSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR--KSLV 275
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQAQS 319
+N+MI G V ++ + M P + T S++ +CS R G
Sbjct: 276 AWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYV 335
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
I++ +A VN + + +Y G+ N A+ +F + ++ SWN+MIS + A+
Sbjct: 336 IRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAV 395
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLLSKIGLMKVE-VLNSLIAAY 435
Y +M VG++PD T+ S+L A L +E +H +S+ L E +L++L+ Y
Sbjct: 396 EVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMY 455
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
+ G A +IF+++P K ++SW +IS + ++G P + L QF + LKP+
Sbjct: 456 SKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDG 511
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 305 bits (781), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 207/718 (28%), Positives = 353/718 (49%), Gaps = 48/718 (6%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++A R+ + LF ++ +PD YT S+ + A A+ FG +
Sbjct: 220 NTIIAGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYSSVLAACASLE----KLRFGKVVQ 274
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
A I+ G + V +++ LYAK GH+
Sbjct: 275 ARVIKCGAE-DVFVCTAIVDLYAKC-------------------------------GHMA 302
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDV-AFDLFRDMQKIGVRPDGYTFTSMLS 202
+A+++F ++PN S V+ W +++ G +D A ++F++M+ GV + T TS++S
Sbjct: 303 EAMEVFSRIPNPSVVS-WTVMLS--GYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVIS 359
Query: 203 LCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH 261
C ++ VH+ V +SGF +SV +LI+MY G + + QVF +++ R +
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIK 321
+ N MI + + A +F M + E + S++S L +G Q ++K
Sbjct: 420 IV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLK 478
Query: 322 TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILT 381
+G V ++ T+YS G + E+ +F+ + +D W MIS F + AI
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 382 YLKMRRVGIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCR 437
+ +M G PDE T ++L + SL + +H + G+ K +++ ++L+ Y +
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 438 NGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXX 497
G + A Q++ LP +S +++ISG+ +G G F ++ + +++
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 498 XXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDT 557
G QVH YI + G +E S+G++L+TMY+K GS+D F+ + D
Sbjct: 659 LKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDL 718
Query: 558 ISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFD 617
I+W ALI++YAQHG+ EA+ + M+ G +PD TF VLSACSH GLV++ +
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMK-EKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777
Query: 618 MMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNL 677
MV YG P H+ C+VD LGRSG L EAE I + ++ + +L +AC HG +
Sbjct: 778 SMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEV 837
Query: 678 RLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
LG++ A+ +E + ++ Y+ LSNI A G+W+E R +M+ G K+PG S +
Sbjct: 838 ELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 186/728 (25%), Positives = 337/728 (46%), Gaps = 60/728 (8%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAA 73
TI ++ N +++ + ESL+ F+++H + + + I+A + A
Sbjct: 109 TIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF-LGFEANEISYGSVISACS----AL 163
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
A F + H I+ G + V ++L+ +++K + + D Y
Sbjct: 164 QAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK------------NLRFEDAY------ 205
Query: 134 SASTRLGHVGDALKLF-DQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
K+F D + +NV WN II + + V FDLF +M +P
Sbjct: 206 -------------KVFRDSL--SANVYCWNTIIAGALRNQNYGAV-FDLFHEMCVGFQKP 249
Query: 193 DGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
D YT++S+L+ C S+E L FG+ V + VI+ G V +++ +Y CG + +A +VF
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV 311
+ V++ M+ G + + A +F++M+ + T SV+S+C +
Sbjct: 309 SRIPN--PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 312 GCQA---QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE---RDLVSWNIM 365
C+A A K+GF ++V A ++MYS G ++ ++ +FE +++ +++V N+M
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVM 424
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGL-MK 424
I+ F Q AI + +M + G+ DEF+ SLL D L + + VH K GL +
Sbjct: 425 ITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLD 484
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
+ V +SL Y + G + + ++F +P+K W ++ISGF G + + FS +L+
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
P+ GK++HGY LR G + LG+ALV MY+KCGSL
Sbjct: 545 DGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKL 604
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+ V++ + + D +S ++LIS Y+QHG ++ F M +S G D + +L A +
Sbjct: 605 ARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS-GFTMDSFAISSILKAAA 663
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNIC 664
G ++ + I G S ++ + + G +++ + I
Sbjct: 664 LSDESSLGAQVHAYITKI-GLCTEPSVGSSLLTMYSKFGSIDDCCKAF--SQINGPDLIA 720
Query: 665 WS-LFSACAAHGNLRLGRMVARLLLEKDHNNPSV-YVLLSNICAAAGQWEEAA-NLRDMM 721
W+ L ++ A HG V L+ EK V +V + + C+ G EE+ +L M+
Sbjct: 721 WTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV 780
Query: 722 REFGTTKQ 729
+++G +
Sbjct: 781 KDYGIEPE 788
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 214/463 (46%), Gaps = 58/463 (12%)
Query: 23 LNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQL 82
+N ++ + ++S + ++++LFT++ LR D +++ + ++ G Q+
Sbjct: 421 VNVMITSFSQSKKPGKAIRLFTRMLQ-EGLRTDEFSVCSLLSV-------LDCLNLGKQV 472
Query: 83 HAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHV 142
H + +++GL V +SL +LY+K L + F I + D+ W +M+S G++
Sbjct: 473 HGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL 532
Query: 143 GDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS 202
+A+ LF +M DD G PD T ++L+
Sbjct: 533 REAIGLFSEM---------------------LDD------------GTSPDESTLAAVLT 559
Query: 203 LCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH 261
+CS L G+ +H +R+G + ++L+ MY CG + A QV+ + D
Sbjct: 560 VCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPE--LDP 617
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL----RVGCQAQA 317
V+ +++I G + +D F++FRDM + F+ M++ +S + ++L +G Q A
Sbjct: 618 VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT-MDSFAISSILKAAALSDESSLGAQVHA 676
Query: 318 QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
K G +V ++ +TMYS FG +++ F ++ DL++W +I+ + Q
Sbjct: 677 YITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANE 736
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVH-SLLSKIGLMKVEVLNS----LI 432
A+ Y M+ G +PD+ T+ +L A +VE + L S + +E N ++
Sbjct: 737 ALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMV 796
Query: 433 AAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
A R+GR+ A +N+ K + ++ G L C + G
Sbjct: 797 DALGRSGRLREAESFINNMHIKP----DALVWGTLLAACKIHG 835
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 168/334 (50%), Gaps = 9/334 (2%)
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
FD + + + ++ YS G + +A +F+ + + D+VS NIMIS + Q L E ++ +
Sbjct: 82 FDVF--LTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 384 KMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLMKVEVLNS-LIAAYCRNG 439
KM +G E +E +YGS++ A +LQ E+V K+G EV+ S LI + +N
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 440 RINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
R A ++F + ++ WNTII+G L N + F + KP++Y
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 500 XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTIS 559
GK V +++ G + ++ + A+V +YAKCG + ++ VF+ + +S
Sbjct: 260 ACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 560 WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
W ++S Y + A+ F+ M+ S G+E ++ T T V+SAC +V + +++ +
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHS-GVEINNCTVTSVISACGRPSMVCEASQVHAWV 377
Query: 620 VNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
GF + ++ + +SG ++ +E++ +
Sbjct: 378 FK-SGFYLDSSVAAALISMYSKSGDIDLSEQVFE 410
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 301 bits (772), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 288/551 (52%), Gaps = 15/551 (2%)
Query: 197 FTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
S+L +C+ + L D G VH +++SG N LI MY C + AY+VF +
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVG 312
R+ V+++A++ G V + + +F +M + P E TF + + +C ++L G
Sbjct: 69 E--RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
Q +K GF+ V N+ + MYS G++NEA+ +F R+ +R L+SWN MI+ F
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 373 NLNETAILTYLKMRRVGIE--PDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLM---K 424
A+ T+ M+ I+ PDEFT SLL A S ++ + +H L + G
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
+ SL+ Y + G + A + F + K++ISW+++I G+ G ++ + F L
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
+ +++ GKQ+ ++ E S+ N++V MY KCG +D
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDE 366
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+ F M +D ISW +I+ Y +HG GK++V F M + IEPD + VLSACS
Sbjct: 367 AEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM-LRHNIEPDEVCYLAVLSACS 425
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNIC 664
H G++ +G +F ++ +G P V+H++C+VDLLGR+G L+EA+ LI N I
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 665 WSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREF 724
+L S C HG++ LG+ V ++LL D NP+ YV++SN+ AG W E N R++
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK 545
Query: 725 GTTKQPGCSWI 735
G K+ G SW+
Sbjct: 546 GLKKEAGMSWV 556
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 231/514 (44%), Gaps = 52/514 (10%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G Q+H + +++G + +N L+ +Y K + + F
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF-------------------- 64
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
D MP R NV W+A+++ NG + LF +M + G+ P+ +TF+
Sbjct: 65 -----------DSMPER-NVVSWSALMSG-HVLNGDLKGSLSLFSEMGRQGIYPNEFTFS 111
Query: 199 SMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
+ L C + L+ G +H ++ GF V NSL+ MY CG + +A +VF +
Sbjct: 112 TNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD- 170
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFS--PMEATFVSVMSSCSS---LRVG 312
R +++NAMI G V A F MQ+A P E T S++ +CSS + G
Sbjct: 171 -RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 313 CQAQAQSIKTGFDAYTA--VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFF 370
Q +++GF ++ + + + +Y G + A+ F++++E+ ++SW+ +I +
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA 289
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKI-GLMKVE 426
QE A+ + +++ + + D F S++G ++ + + +L K+ ++
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS 349
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
VLNS++ Y + G ++ A + F+ + K +ISW +I+G+ +G + + F +L
Sbjct: 350 VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN 409
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISLGNALVTMYAKCGSLDGS 545
++P+ G+++ +L HG + +V + + G L +
Sbjct: 410 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA 469
Query: 546 LGVFNAM-VKRDTISWNALISAYAQHGQ---GKE 575
+ + M +K + W L+S HG GKE
Sbjct: 470 KHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 503
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 166/371 (44%), Gaps = 64/371 (17%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTL-RPDHYTLSTAITASANTRPAA 73
I ++ N ++A + +++L F + ++ RPD +TL++ + A ++T
Sbjct: 168 IVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST---- 223
Query: 74 TATTFGNQLHAHAIRTGLKAHSH--VANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTT 131
G Q+H +R+G S + SL+ LY K L S +AF +I+ SW++
Sbjct: 224 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSS 283
Query: 132 MLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR 191
++ LG+ A G A LF+ +Q++ +
Sbjct: 284 LI-----LGY----------------------------AQEGEFVEAMGLFKRLQELNSQ 310
Query: 192 PDGYTFTSMLSL-CSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
D + +S++ + LL G+ + ++ ++ TSV+NS++ MY CG V +A +
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKC 370
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR 310
F E++ L+D +++ +I G + + + +F +M + P E +++V+S+CS
Sbjct: 371 FAEMQ--LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS--- 425
Query: 311 VGCQAQAQSIKTGFDAYTAV-----NNATMTMYSCF-------GKVNEAQNIFERMEERD 358
+ IK G + ++ + + Y+C G++ EA+++ + M +
Sbjct: 426 -----HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKP 480
Query: 359 LVS-WNIMISM 368
V W ++S+
Sbjct: 481 NVGIWQTLLSL 491
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 198/693 (28%), Positives = 340/693 (49%), Gaps = 84/693 (12%)
Query: 54 PDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLAS 113
PD++ + A A + FG +H + +++GL+ VA+SL +Y K
Sbjct: 171 PDNFVVPNVCKACG----ALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC----- 221
Query: 114 VERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNG 173
G + DA K+FD++P+R+ VA WNA++ NG
Sbjct: 222 --------------------------GVLDDASKVFDEIPDRNAVA-WNALMVGY-VQNG 253
Query: 174 HDDVAFDLFRDMQKIGVRPDGYTFTSMLSL-CSVELLDFGRHVHSVVIRSGFLARTSVVN 232
++ A LF DM+K GV P T ++ LS ++ ++ G+ H++ I +G +
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 233 SLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVM-----FRDM 287
SL+ Y G + A VF + +D VT+N +I G V+ EDA M +
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFE--KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKL 371
Query: 288 QKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
+ C + AT +S + +L++G + Q I+ F++ + + M MY+ G + +A
Sbjct: 372 KYDCVTL--ATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 348 QNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
+ +F+ E+DL+ WN +++ + + L+ A+ + M+ G+ P+ T+
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW---------- 479
Query: 408 QVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWA----LQIFSNLPYKSLISWNTII 463
N +I + RNG+++ A LQ+ S+ +LISW T++
Sbjct: 480 ---------------------NLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 464 SGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH-GF 522
+G + NGC + + + + L+PNA+ G+ +HGYI+R+
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEA 582
SS +S+ +LV MYAKCG ++ + VF + + + NA+ISAYA +G KEA+ + +
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRS 642
++ G++PD+ T T VLSAC+H G ++ IF +V+ P ++H+ +VDLL +
Sbjct: 639 LE-GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASA 697
Query: 643 GYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLS 702
G E+A RLI+ F ++ + SL ++C L ++R LLE + N YV +S
Sbjct: 698 GETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTIS 757
Query: 703 NICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
N A G W+E +R+MM+ G K+PGCSWI
Sbjct: 758 NAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 790
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/547 (26%), Positives = 266/547 (48%), Gaps = 19/547 (3%)
Query: 150 DQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVEL- 208
+Q + S+ + ++ + + C NG A L +M +R + +L C E
Sbjct: 28 EQAHSPSSTSYFHRVSSLC--KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERD 85
Query: 209 LDFGRHVHSVVIRSG-FLARTSVVNS-LITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNA 266
L G+ +H+ ++++G F AR + + L+ Y C + A +F ++ +R+ ++ A
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLR--VRNVFSWAA 143
Query: 267 MIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTG 323
+I R+ E A + F +M + P +V +C +L R G +K+G
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
+ V ++ MY G +++A +F+ + +R+ V+WN ++ + Q NE AI +
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFS 263
Query: 384 KMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLLSKIGLMKVEVL-NSLIAAYCRNG 439
MR+ G+EP T + L AS ++ VE H++ G+ +L SL+ YC+ G
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG 323
Query: 440 RINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
I +A +F + K +++WN IISG++ G + + LK +
Sbjct: 324 LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
Query: 500 XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTIS 559
GK+V Y +RH F S+I L + ++ MYAKCGS+ + VF++ V++D I
Sbjct: 384 AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL 443
Query: 560 WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
WN L++AYA+ G EA+ F MQ+ G+ P+ T+ +++ + G VD+ +F M
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLE-GVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 620 VNIYGFVPSVDHFSCIVDLLGRSGYLEEA---ERLIKGGYFGANSNICWSLFSACAAHGN 676
+ G +P++ ++ +++ + ++G EEA R ++ N+ SACA +
Sbjct: 503 QS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLAS 561
Query: 677 LRLGRMV 683
L +GR +
Sbjct: 562 LHIGRTI 568
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 53/306 (17%)
Query: 45 QIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSL 104
Q+ L+ D TL+T ++A+A T G ++ + IR ++ +A++++ +
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAARTE----NLKLGKEVQCYCIRHSFESDIVLASTVMDM 419
Query: 105 YAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRS---NVAVW 161
YAK + ++ F D W T+L+A G G+AL+LF M NV W
Sbjct: 420 YAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW 479
Query: 162 NAIITRCGADNGHDDVAFDLF-----------------------------------RDMQ 186
N II NG D A D+F R MQ
Sbjct: 480 NLIILSL-LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Query: 187 KIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVN---SLITMYFNCG 242
+ G+RP+ ++ T LS C+ + L GR +H +IR+ L +S+V+ SL+ MY CG
Sbjct: 539 ESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN--LQHSSLVSIETSLVDMYAKCG 596
Query: 243 CVVDAYQVFGEVEAGLRDHVTY-NAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
+ A +VFG + L + NAMI ++A ++R ++ P T +
Sbjct: 597 DINKAEKVFG---SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITN 653
Query: 302 VMSSCS 307
V+S+C+
Sbjct: 654 VLSACN 659
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 200/695 (28%), Positives = 349/695 (50%), Gaps = 49/695 (7%)
Query: 49 SHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKA 108
S T + + + + A A +R + G ++H I+ G+ + + SLL +Y +
Sbjct: 93 SETTQISKFVFPSVLRACAGSREHLSV---GGKVHGRIIKGGVDDDAVIETSLLCMYGQT 149
Query: 109 EDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRC 168
G++ DA K+FD MP R VA W+ +++ C
Sbjct: 150 -------------------------------GNLSDAEKVFDGMPVRDLVA-WSTLVSSC 177
Query: 169 GADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLAR 227
+NG A +F+ M GV PD T S++ C+ + L R VH + R F
Sbjct: 178 -LENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 228 TSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
++ NSL+TMY CG ++ + ++F ++ ++ V++ AMI R + +E A F +M
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAK--KNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 288 QKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDA-YTAVNNATMTMYSCFGK 343
K+ P T SV+SSC + R G +++ D Y +++ A + +Y+ GK
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 344 VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+++ + + + +R++V+WN +IS++ + A+ + +M I+PD FT S + A
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 404 SDSLQVVEM---VHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWN 460
++ +V + +H + + + V NSLI Y ++G ++ A +F+ + ++S+++WN
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 474
Query: 461 TIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
+++ GF NG ++ + F + ++ L+ N GK VH ++
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS 534
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCF 580
G ++ AL+ MYAKCG L+ + VF AM R +SW+++I+AY HG+ A+ F
Sbjct: 535 GLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTF 593
Query: 581 EAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLG 640
M + G +P+ F VLSAC H G V++G F++M + +G P+ +HF+C +DLL
Sbjct: 594 NQM-VESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLS 651
Query: 641 RSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVL 700
RSG L+EA R IK F A++++ SL + C H + + + + L + ++ Y L
Sbjct: 652 RSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTL 711
Query: 701 LSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
LSNI A G+WEE LR M+ K PG S I
Sbjct: 712 LSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAI 746
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 166/664 (25%), Positives = 305/664 (45%), Gaps = 60/664 (9%)
Query: 80 NQLHAHAIRTG-LKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
+QLHAH + TG L+ L+ YA S F YPD + + ++ +
Sbjct: 18 SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCN-- 75
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
VW ++ D A DL+ + + + F
Sbjct: 76 ---------------------VWCHLL----------DAAIDLYHRLVSETTQISKFVFP 104
Query: 199 SMLSLC--SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
S+L C S E L G VH +I+ G + SL+ MY G + DA +VF +
Sbjct: 105 SVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMP- 163
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGC 313
+RD V ++ ++ + A MF+ M P T +SV+ C+ LR+
Sbjct: 164 -VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQEN 373
Q + FD + N+ +TMYS G + ++ IFE++ +++ VSW MIS + +
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282
Query: 374 LNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGL-MKVEVLN 429
+E A+ ++ +M + GIEP+ T S+L + + ++ + VH + L E L+
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 342
Query: 430 -SLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
+L+ Y G+++ + + +++++WN++IS + G +Q L F ++ +K
Sbjct: 343 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
P+A+ GKQ+HG+++R S E + N+L+ MY+K GS+D + V
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTV 461
Query: 549 FNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGL 608
FN + R ++WN+++ ++Q+G EA+ F+ M S +E + TF V+ ACS +G
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNEVTFLAVIQACSSIGS 520
Query: 609 VDDGTRIFDMMVNIYGFVPSVDHF--SCIVDLLGRSGYLEEAERLIKGGYFGANSNICWS 666
++ G + ++ I G D F + ++D+ + G L AE + + + S
Sbjct: 521 LEKGKWVHHKLI-ISGL---KDLFTDTALIDMYAKCGDLNAAETVFR-AMSSRSIVSWSS 575
Query: 667 LFSACAAHGNLRLGRMVA---RLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
+ +A HG R+G ++ +++ N V++ + + C +G EE ++M+
Sbjct: 576 MINAYGMHG--RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS 633
Query: 724 FGTT 727
FG +
Sbjct: 634 FGVS 637
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 198/420 (47%), Gaps = 13/420 (3%)
Query: 299 FVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVN-NATMTMYSCFGKVNEAQNIFERMEER 357
++ + SCSSLR+ Q A + TG + + Y+ G + ++ +FE
Sbjct: 4 YMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL----GASDSLQVVEMV 413
D + ++I +L + AI Y ++ + +F + S+L G+ + L V V
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 414 HSLLSKIGLMKVEVLN-SLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCP 472
H + K G+ V+ SL+ Y + G ++ A ++F +P + L++W+T++S L NG
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 473 LQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNAL 532
++ L F +++ ++P+A + VHG I R F + +L N+L
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 533 VTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPD 592
+TMY+KCG L S +F + K++ +SW A+IS+Y + ++A+ F M I GIEP+
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM-IKSGIEPN 302
Query: 593 HATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFS-CIVDLLGRSGYLEEAERL 651
T VLS+C +GL+ +G + V P+ + S +V+L G L + E +
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVR-RELDPNYESLSLALVELYAECGKLSDCETV 361
Query: 652 IKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNI--CAAAG 709
++ + + W+ + AH + + + + P + L S+I C AG
Sbjct: 362 LR--VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG 419
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 141/609 (23%), Positives = 248/609 (40%), Gaps = 74/609 (12%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
L+++ + + ++L++F + + PD T+ + + A A + +H
Sbjct: 173 LVSSCLENGEVVKALRMF-KCMVDDGVEPDAVTMISVVEGCAELGCLRIARS----VHGQ 227
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
R + NSLL++Y+K DL S ER F +I + SWT M+S+ R G+
Sbjct: 228 ITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR----GE- 282
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
F + RS F +M K G+ P+ T S+LS C
Sbjct: 283 ---FSEKALRS-------------------------FSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 206 -VELLDFGRHVHSVVIRSGFLAR-TSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
+ L+ G+ VH +R S+ +L+ +Y CG + D V V R+ V
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD--RNIVA 372
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSI 320
+N++I A +FR M P T S +S+C + + +G Q I
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 321 KTGF-DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
+T D + V N+ + MYS G V+ A +F +++ R +V+WN M+ F Q + AI
Sbjct: 433 RTDVSDEF--VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAI 490
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGLMKVEVLNSLIAAYC 436
+ M +E +E T+ +++ A S+ +E VH L GL + +LI Y
Sbjct: 491 SLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYA 550
Query: 437 RNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXX 496
+ G +N A +F + +S++SW+++I+ + +G + F+ ++ + KPN
Sbjct: 551 KCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMN 610
Query: 497 XXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKR 555
GK + G S + + ++ G L + M
Sbjct: 611 VLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLA 670
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
D W +L++ H + M I I+ D + +V D T
Sbjct: 671 DASVWGSLVNGCRIH----------QKMDIIKAIKNDLSD------------IVTDDTGY 708
Query: 616 FDMMVNIYG 624
+ ++ NIY
Sbjct: 709 YTLLSNIYA 717
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 198/611 (32%), Positives = 308/611 (50%), Gaps = 21/611 (3%)
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR--PDGYTF 197
GH+ A KLF++MP +S++ +N I+ R G A +F M GV+ PDGYT+
Sbjct: 63 GHITYARKLFEEMP-QSSLLSYN-IVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTY 120
Query: 198 TSMLSLCSVEL--LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
++ + EL + G VH ++RS F V N+L+ MY N G V A VF ++
Sbjct: 121 -PFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VG 312
RD +++N MI G R DA +MF M AT VS++ C L+ +G
Sbjct: 180 N--RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
+ V NA + MY G+++EA+ +F+RME RD+++W MI+ + ++
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGA-SDSLQVVE--MVHSLLSKIGLMK-VEVL 428
E A+ M+ G+ P+ T SL+ D+L+V + +H + + + +
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
SLI+ Y + R++ ++FS W+ II+G + N L F + ++
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
PN +H Y+ + GF S + LV +Y+KCG+L+ + +
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 549 FNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
FN + ++ D + W ALIS Y HG G A+ F M + G+ P+ TFT L+ACS
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM-VRSGVTPNEITFTSALNACS 536
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNIC 664
H GLV++G +F M+ Y + +H++CIVDLLGR+G L+EA LI F S +
Sbjct: 537 HSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVW 596
Query: 665 WSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREF 724
+L +AC H N++LG M A L E + N YVLL+NI AA G+W++ +R MM
Sbjct: 597 GALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENV 656
Query: 725 GTTKQPGCSWI 735
G K+PG S I
Sbjct: 657 GLRKKPGHSTI 667
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 141/282 (50%), Gaps = 9/282 (3%)
Query: 338 YSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIE--PDEF 395
Y+ G + A+ +FE M + L+S+NI+I M+ +E L AI +++M G++ PD +
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 396 TYGSLLGASDSLQVVEM---VHS--LLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSN 450
TY + A+ L+ +++ VH L S G K V N+L+A Y G++ A +F
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKY-VQNALLAMYMNFGKVEMARDVFDV 177
Query: 451 LPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHG 510
+ + +ISWNT+ISG+ NG L F ++N + + G
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 511 KQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQH 570
+ VH + +I + NALV MY KCG +D + VF+ M +RD I+W +I+ Y +
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 571 GQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDG 612
G + A+ MQ G+ P+ T ++S C V+DG
Sbjct: 298 GDVENALELCRLMQFE-GVRPNAVTIASLVSVCGDALKVNDG 338
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 144/622 (23%), Positives = 263/622 (42%), Gaps = 64/622 (10%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHSSHT-LRPDHYTLSTAITASANTRPAATATTF 78
+L N ++ R + +++ +F ++ S PD YT A+ + +
Sbjct: 80 LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELK----SMKL 135
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G +H +R+ +V N+LL++Y F ++E D
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMN----------FGKVEMARD------------ 173
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
+FD M NR +V WN +I+ NG+ + A +F M V D T
Sbjct: 174 ---------VFDVMKNR-DVISWNTMISGY-YRNGYMNDALMMFDWMVNESVDLDHATIV 222
Query: 199 SMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
SML +C ++ L+ GR+VH +V + V N+L+ MY CG + +A VF +E
Sbjct: 223 SMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMER- 281
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC-SSLRV--GCQ 314
RD +T+ MI+G E+A + R MQ P T S++S C +L+V G
Sbjct: 282 -RDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKC 340
Query: 315 AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENL 374
+++ + + + ++MY+ +V+ +F + W+ +I+ Q L
Sbjct: 341 LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNEL 400
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGLM-KVEVLNS 430
A+ + +MRR +EP+ T SLL A +L + +H L+K G M ++
Sbjct: 401 VSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG 460
Query: 431 LIAAYCRNGRINWALQIFSNL----PYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
L+ Y + G + A +IF+ + K ++ W +ISG+ +G L+ F ++ +
Sbjct: 461 LVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG 520
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN---ALVTMYAKCGSLD 543
+ PN G + ++L H ++ N +V + + G LD
Sbjct: 521 VTPNEITFTSALNACSHSGLVEEGLTLFRFMLEH--YKTLARSNHYTCIVDLLGRAGRLD 578
Query: 544 GSLGVFNAMVKRDTIS-WNALISAYAQHGQGKEAVCCFE-AMQISPGIEPDH-ATFTIVL 600
+ + + T + W AL++A H E V E A +EP++ + ++
Sbjct: 579 EAYNLITTIPFEPTSTVWGALLAACVTH----ENVQLGEMAANKLFELEPENTGNYVLLA 634
Query: 601 SACSHVGLVDDGTRIFDMMVNI 622
+ + +G D ++ MM N+
Sbjct: 635 NIYAALGRWKDMEKVRSMMENV 656
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 194/668 (29%), Positives = 330/668 (49%), Gaps = 45/668 (6%)
Query: 77 TFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
+ G Q+ +++GL++ V NSL+S+
Sbjct: 160 SLGRQIIGQVVKSGLESKLAVENSLISMLGS----------------------------- 190
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYT 196
+G+V A +FDQM R ++ WN+I A NGH + +F +F M++ + T
Sbjct: 191 --MGNVDYANYIFDQMSERDTIS-WNSIAA-AYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 197 FTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
+++LS L V+ +GR +H +V++ GF + V N+L+ MY G V+A VF ++
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVG 312
+D +++N+++ V R+ DA + M + S TF S +++C + G
Sbjct: 307 T--KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 364
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
+ +G + NA ++MY G+++E++ + +M RD+V+WN +I + ++
Sbjct: 365 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 424
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGA----SDSLQVVEMVHSLLSKIGLMKVE-V 427
+ A+ + MR G+ + T S+L A D L+ + +H+ + G E V
Sbjct: 425 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 484
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
NSLI Y + G ++ + +F+ L +++I+WN +++ +G + L+ S + + +
Sbjct: 485 KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 544
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
+ + G+Q+HG ++ GF + + NA MY+KCG + +
Sbjct: 545 SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVK 604
Query: 548 VFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG 607
+ V R SWN LISA +HG +E F M + GI+P H TF +L+ACSH G
Sbjct: 605 MLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM-LEMGIKPGHVTFVSLLTACSHGG 663
Query: 608 LVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSL 667
LVD G +DM+ +G P+++H C++DLLGRSG L EAE I N + SL
Sbjct: 664 LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 723
Query: 668 FSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTT 727
++C HGNL GR A L + + + SVYVL SN+ A G+WE+ N+R M
Sbjct: 724 LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 783
Query: 728 KQPGCSWI 735
K+ CSW+
Sbjct: 784 KKQACSWV 791
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 174/715 (24%), Positives = 335/715 (46%), Gaps = 57/715 (7%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N +++ + R + E ++ F ++ ++P + +++ +TA + + G Q+H
Sbjct: 10 NTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACGRS---GSMFREGVQVH 65
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
++GL + +V+ ++L LY G V
Sbjct: 66 GFVAKSGLLSDVYVSTAILHLYGV-------------------------------YGLVS 94
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
+ K+F++MP+R NV W +++ +D G + D+++ M+ GV + + + ++S
Sbjct: 95 CSRKVFEEMPDR-NVVSWTSLMVGY-SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 152
Query: 204 CSVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH 261
C + L D GR + V++SG ++ +V NSLI+M + G V A +F ++ RD
Sbjct: 153 CGL-LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE--RDT 209
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQK---ACFSPMEATFVSVMSSCSSLRVGCQAQAQ 318
+++N++ + E++F +F M++ S +T +SV+ + G
Sbjct: 210 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 269
Query: 319 SIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETA 378
+K GFD+ V N + MY+ G+ EA +F++M +DL+SWN +++ F + + A
Sbjct: 270 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 329
Query: 379 ILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGLMKVEVL-NSLIAA 434
+ M G + T+ S L A D + ++H L+ GL +++ N+L++
Sbjct: 330 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSM 389
Query: 435 YCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXX 494
Y + G ++ + ++ +P + +++WN +I G+ + P + L F + + N
Sbjct: 390 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 449
Query: 495 XXXXXX-XXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMV 553
GK +H YI+ GF S+ + N+L+TMYAKCG L S +FN +
Sbjct: 450 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 509
Query: 554 KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT 613
R+ I+WNA+++A A HG G+E + M+ S G+ D +F+ LSA + + ++++G
Sbjct: 510 NRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEGQ 568
Query: 614 RIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWS-LFSACA 672
++ + V + GF F+ D+ + G + E +++ S W+ L SA
Sbjct: 569 QLHGLAVKL-GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV--NRSLPSWNILISALG 625
Query: 673 AHGNLRLGRMVARLLLEKDHNNPSV-YVLLSNICAAAGQWEEAANLRDMM-REFG 725
HG +LE V +V L C+ G ++ DM+ R+FG
Sbjct: 626 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 680
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 153/550 (27%), Positives = 264/550 (48%), Gaps = 28/550 (5%)
Query: 152 MPNRSNVAVWNAI---ITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC--SV 206
MP R+ V+ WN + I R G + FR M +G++P + S+++ C S
Sbjct: 1 MPVRNEVS-WNTMMSGIVRVGLYLE----GMEFFRKMCDLGIKPSSFVIASLVTACGRSG 55
Query: 207 ELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNA 266
+ G VH V +SG L+ V +++ +Y G V + +VF E+ R+ V++ +
Sbjct: 56 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTS 113
Query: 267 MIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTG 323
++ G E+ +++ M+ E + V+SSC L+ +G Q Q +K+G
Sbjct: 114 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 173
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
++ AV N+ ++M G V+ A IF++M ERD +SWN + + + Q E + +
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 384 KMRRVGIEPDEFTYGSL---LGASDSLQVVEMVHSLLSKIGLMKVE-VLNSLIAAYCRNG 439
MRR E + T +L LG D + +H L+ K+G V V N+L+ Y G
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 440 RINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
R A +F +P K LISWN++++ F+ +G L L +++++ N
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 353
Query: 500 XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTIS 559
G+ +HG ++ G +GNALV+MY K G + S V M +RD ++
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA 413
Query: 560 WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG-LVDDGTRIFDM 618
WNALI YA+ +A+ F+ M++ G+ ++ T VLSAC G L++ G +
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERGKPLHAY 472
Query: 619 MVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SLFSACAAHGNL 677
+V+ GF + ++ + + G L ++ L G + I W ++ +A A HG+
Sbjct: 473 IVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNG--LDNRNIITWNAMLAANAHHGH- 528
Query: 678 RLGRMVARLL 687
G V +L+
Sbjct: 529 --GEEVLKLV 536
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 194/668 (29%), Positives = 330/668 (49%), Gaps = 45/668 (6%)
Query: 77 TFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
+ G Q+ +++GL++ V NSL+S+
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGS----------------------------- 207
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYT 196
+G+V A +FDQM R ++ WN+I A NGH + +F +F M++ + T
Sbjct: 208 --MGNVDYANYIFDQMSERDTIS-WNSIAA-AYAQNGHIEESFRIFSLMRRFHDEVNSTT 263
Query: 197 FTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
+++LS L V+ +GR +H +V++ GF + V N+L+ MY G V+A VF ++
Sbjct: 264 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVG 312
+D +++N+++ V R+ DA + M + S TF S +++C + G
Sbjct: 324 T--KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 381
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
+ +G + NA ++MY G+++E++ + +M RD+V+WN +I + ++
Sbjct: 382 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGA----SDSLQVVEMVHSLLSKIGLMKVE-V 427
+ A+ + MR G+ + T S+L A D L+ + +H+ + G E V
Sbjct: 442 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 501
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
NSLI Y + G ++ + +F+ L +++I+WN +++ +G + L+ S + + +
Sbjct: 502 KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 561
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
+ + G+Q+HG ++ GF + + NA MY+KCG + +
Sbjct: 562 SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVK 621
Query: 548 VFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG 607
+ V R SWN LISA +HG +E F M + GI+P H TF +L+ACSH G
Sbjct: 622 MLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM-LEMGIKPGHVTFVSLLTACSHGG 680
Query: 608 LVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSL 667
LVD G +DM+ +G P+++H C++DLLGRSG L EAE I N + SL
Sbjct: 681 LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 740
Query: 668 FSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTT 727
++C HGNL GR A L + + + SVYVL SN+ A G+WE+ N+R M
Sbjct: 741 LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 800
Query: 728 KQPGCSWI 735
K+ CSW+
Sbjct: 801 KKQACSWV 808
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 174/715 (24%), Positives = 335/715 (46%), Gaps = 57/715 (7%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N +++ + R + E ++ F ++ ++P + +++ +TA + + G Q+H
Sbjct: 27 NTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACGRS---GSMFREGVQVH 82
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
++GL + +V+ ++L LY G V
Sbjct: 83 GFVAKSGLLSDVYVSTAILHLYGV-------------------------------YGLVS 111
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
+ K+F++MP+R NV W +++ +D G + D+++ M+ GV + + + ++S
Sbjct: 112 CSRKVFEEMPDR-NVVSWTSLMVGY-SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 169
Query: 204 CSVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH 261
C + L D GR + V++SG ++ +V NSLI+M + G V A +F ++ RD
Sbjct: 170 CGL-LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE--RDT 226
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQK---ACFSPMEATFVSVMSSCSSLRVGCQAQAQ 318
+++N++ + E++F +F M++ S +T +SV+ + G
Sbjct: 227 ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGL 286
Query: 319 SIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETA 378
+K GFD+ V N + MY+ G+ EA +F++M +DL+SWN +++ F + + A
Sbjct: 287 VVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA 346
Query: 379 ILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGLMKVEVL-NSLIAA 434
+ M G + T+ S L A D + ++H L+ GL +++ N+L++
Sbjct: 347 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSM 406
Query: 435 YCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXX 494
Y + G ++ + ++ +P + +++WN +I G+ + P + L F + + N
Sbjct: 407 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 466
Query: 495 XXXXXX-XXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMV 553
GK +H YI+ GF S+ + N+L+TMYAKCG L S +FN +
Sbjct: 467 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 526
Query: 554 KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT 613
R+ I+WNA+++A A HG G+E + M+ S G+ D +F+ LSA + + ++++G
Sbjct: 527 NRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEGQ 585
Query: 614 RIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWS-LFSACA 672
++ + V + GF F+ D+ + G + E +++ S W+ L SA
Sbjct: 586 QLHGLAVKL-GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV--NRSLPSWNILISALG 642
Query: 673 AHGNLRLGRMVARLLLEKDHNNPSV-YVLLSNICAAAGQWEEAANLRDMM-REFG 725
HG +LE V +V L C+ G ++ DM+ R+FG
Sbjct: 643 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 697
Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 157/554 (28%), Positives = 267/554 (48%), Gaps = 25/554 (4%)
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAI---ITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
T+ G V A LFD MP R+ V+ WN + I R G + FR M +G++P
Sbjct: 3 TKFGRVKPARHLFDIMPVRNEVS-WNTMMSGIVRVGLYLE----GMEFFRKMCDLGIKPS 57
Query: 194 GYTFTSMLSLC--SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
+ S+++ C S + G VH V +SG L+ V +++ +Y G V + +VF
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR- 310
E+ R+ V++ +++ G E+ +++ M+ E + V+SSC L+
Sbjct: 118 EEMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 175
Query: 311 --VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISM 368
+G Q Q +K+G ++ AV N+ ++M G V+ A IF++M ERD +SWN + +
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSL---LGASDSLQVVEMVHSLLSKIGLMKV 425
+ Q E + + MRR E + T +L LG D + +H L+ K+G V
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 295
Query: 426 E-VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
V N+L+ Y GR A +F +P K LISWN++++ F+ +G L L ++++
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
+ N G+ +HG ++ G +GNALV+MY K G +
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
S V M +RD ++WNALI YA+ +A+ F+ M++ G+ ++ T VLSAC
Sbjct: 416 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACL 474
Query: 605 HVG-LVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNI 663
G L++ G + +V+ GF + ++ + + G L ++ L G + I
Sbjct: 475 LPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNG--LDNRNII 531
Query: 664 CW-SLFSACAAHGN 676
W ++ +A A HG+
Sbjct: 532 TWNAMLAANAHHGH 545
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 161/310 (51%), Gaps = 11/310 (3%)
Query: 337 MYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFT 396
MY+ FG+V A+++F+ M R+ VSWN M+S + L + + KM +GI+P F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 397 YGSLL---GASDSL-QVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNL 451
SL+ G S S+ + VH ++K GL+ V V +++ Y G ++ + ++F +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 452 PYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGK 511
P ++++SW +++ G+ G P + ++ + + + N G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 512 QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHG 571
Q+ G +++ G S++++ N+L++M G++D + +F+ M +RDTISWN++ +AYAQ+G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 572 QGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDH 631
+E+ F M+ E + T + +LS HV G I ++V + GF D
Sbjct: 241 HIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM-GF----DS 294
Query: 632 FSCIVDLLGR 641
C+ + L R
Sbjct: 295 VVCVCNTLLR 304
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 312/621 (50%), Gaps = 21/621 (3%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRD 184
D ++ +L+A + G DAL LFD+MP R+NV+ +T D + L+
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVS----FVTLAQGYACQDPIG--LYSR 136
Query: 185 MQKIGVRPDGYTFTSMLSL-CSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGC 243
+ + G + + FTS L L S++ + +HS +++ G+ + V +LI Y CG
Sbjct: 137 LHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 244 VVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM 303
V A VF + +D V + ++ V ED+ + M+ A F P TF + +
Sbjct: 197 VDSARTVFEGILC--KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 304 SSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLV 360
+ L Q +KT + V + +Y+ G +++A +F M + D+V
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 361 SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL-----GASDSLQVVEMVHS 415
W+ MI+ F Q A+ +++MR + P+EFT S+L G L E +H
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG--EQLHG 372
Query: 416 LLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQ 474
L+ K+G + + V N+LI Y + +++ A+++F+ L K+ +SWNT+I G+ G +
Sbjct: 373 LVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGK 432
Query: 475 GLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVT 534
F L + G QVHG ++ + ++++ N+L+
Sbjct: 433 AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLID 492
Query: 535 MYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHA 594
MYAKCG + + VFN M D SWNALIS Y+ HG G++A+ + M+ +P+
Sbjct: 493 MYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK-DRDCKPNGL 551
Query: 595 TFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKG 654
TF VLS CS+ GL+D G F+ M+ +G P ++H++C+V LLGRSG L++A +LI+G
Sbjct: 552 TFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEG 611
Query: 655 GYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEA 714
+ + I ++ SA N R A +L+ + + + YVL+SN+ A A QW
Sbjct: 612 IPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANV 671
Query: 715 ANLRDMMREFGTTKQPGCSWI 735
A++R M+E G K+PG SWI
Sbjct: 672 ASIRKSMKEMGVKKEPGLSWI 692
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 205/438 (46%), Gaps = 50/438 (11%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHV 97
+SLKL + + + + P++YT TA+ AS A F +H ++T V
Sbjct: 230 DSLKLLSCMRMAGFM-PNNYTFDTALKASI----GLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 98 ANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSN 157
LL LY + D++ + F E+ D W+ M++ +
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ------------------- 325
Query: 158 VAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSV-ELLDFGRHVH 216
NG + A DLF M++ V P+ +T +S+L+ C++ + G +H
Sbjct: 326 --------------NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLH 371
Query: 217 SVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDR 276
+V++ GF V N+LI +Y C + A ++F E+ + ++ V++N +I G +
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSS--KNEVSWNTVIVGYENLGE 429
Query: 277 NEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNA 333
AF MFR+ + S E TF S + +C+SL +G Q +IKT AV+N+
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
+ MY+ G + AQ++F ME D+ SWN +IS + L A+ M+ +P+
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPN 549
Query: 394 EFTY-GSLLGASDS---LQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIF 448
T+ G L G S++ Q E S++ G+ +E ++ R+G+++ A+++
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609
Query: 449 SNLPYK-SLISWNTIISG 465
+PY+ S++ W ++S
Sbjct: 610 EGIPYEPSVMIWRAMLSA 627
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 169/393 (43%), Gaps = 55/393 (13%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ ++ + ++A ++ E++ LF ++ + + P+ +TLS+ + A
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVV-PNEFTLSSILNGCA----IGK 362
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
+ G QLH ++ G +V+N+L+ +YAK E + + + FAE+ ++ SW T++
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
LG G AF +FR+ + V
Sbjct: 423 GYENLGEGGK---------------------------------AFSMFREALRNQVSVTE 449
Query: 195 YTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
TF+S L C S+ +D G VH + I++ + +V NSLI MY CG + A VF E
Sbjct: 450 VTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNE 509
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC 313
+E D ++NA+I G A + M+ P TF+ V+S CS+ +
Sbjct: 510 MET--IDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLID 567
Query: 314 QAQA--------QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME-ERDLVSWNI 364
Q Q I+ + YT + + + G++++A + E + E ++ W
Sbjct: 568 QGQECFESMIRDHGIEPCLEHYTCM----VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRA 623
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTY 397
M+S +N E A + ++ ++ DE TY
Sbjct: 624 MLSASMNQNNEEFARRSAEEILKIN-PKDEATY 655
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 205/739 (27%), Positives = 354/739 (47%), Gaps = 50/739 (6%)
Query: 5 WFSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAIT 64
W +R++ +S + +++ T+S + +L LF ++ +S T P+ +T S+ +
Sbjct: 75 WNARKL-FDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGT-HPNEFTFSSVVR 132
Query: 65 ASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYP 124
+ A R ++G ++H I+TG + +S V +SL LY+K F+ ++
Sbjct: 133 SCAGLRD----ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNA 188
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRD 184
D SWT M I + GA + A + +
Sbjct: 189 DTISWTMM-------------------------------ISSLVGARKWRE--ALQFYSE 215
Query: 185 MQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCV 244
M K GV P+ +TF +L S L+FG+ +HS +I G + SL+ Y +
Sbjct: 216 MVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKM 275
Query: 245 VDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
DA +V +G +D + +++ G VR R ++A F +M+ P T+ +++S
Sbjct: 276 EDAVRVLNS--SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
Query: 305 SCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMY-SCFGKVNEAQNIFERMEERDLV 360
CS++R G Q +Q+IK GF+ T V NA + MY C EA +F M ++V
Sbjct: 334 LCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVV 393
Query: 361 SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ----VVEMVHSL 416
SW +I + ++M + +EP+ T +L A L+ V+E+ L
Sbjct: 394 SWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYL 453
Query: 417 LSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGL 476
L + ++ V NSL+ AY + ++++A + ++ + I++ ++++ F G L
Sbjct: 454 LRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMAL 513
Query: 477 EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMY 536
+ + ++ + GK +H Y ++ GFS S+ N+LV MY
Sbjct: 514 SVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMY 573
Query: 537 AKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATF 596
+KCGSL+ + VF + D +SWN L+S A +G A+ FE M++ EPD TF
Sbjct: 574 SKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKE-TEPDSVTF 632
Query: 597 TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGY 656
I+LSACS+ L D G F +M IY P V+H+ +V +LGR+G LEEA +++ +
Sbjct: 633 LILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMH 692
Query: 657 FGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAAN 716
N+ I +L AC GNL LG +A L ++P++Y+LL+++ +G+ E A
Sbjct: 693 LKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQK 752
Query: 717 LRDMMREFGTTKQPGCSWI 735
R++M E +K+ G S +
Sbjct: 753 TRNLMTEKRLSKKLGKSTV 771
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 145/590 (24%), Positives = 274/590 (46%), Gaps = 47/590 (7%)
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
+ ++ G +H I+ GL + + N+LLSLY K + + + + F E+ + ++WT M
Sbjct: 36 SNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVM 95
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
+SA T+ AL LF++ M G P
Sbjct: 96 ISAFTKSQEFASALSLFEE---------------------------------MMASGTHP 122
Query: 193 DGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
+ +TF+S++ C+ + + +G VH VI++GF + V +SL +Y CG +A ++F
Sbjct: 123 NEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELF 182
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS--SL 309
++ D +++ MI LV + +A + +M KA P E TFV ++ + S L
Sbjct: 183 SSLQNA--DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMF 369
G + I G + + + YS F K+ +A + E+D+ W ++S F
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF 300
Query: 370 FQENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIGLM-KV 425
+ + A+ T+L+MR +G++P+ FTY ++L A SL + +HS K+G
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST 360
Query: 426 EVLNSLIAAY--CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALL 483
+V N+L+ Y C + A ++F + +++SW T+I G + +G ++
Sbjct: 361 DVGNALVDMYMKCSASEVE-ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 484 NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLD 543
++PN ++H Y+LR E+ +GN+LV YA +D
Sbjct: 420 KREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVD 479
Query: 544 GSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
+ V +M +RD I++ +L++ + + G+ + A+ M GI D + +SA
Sbjct: 480 YAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM-YGDGIRMDQLSLPGFISAS 538
Query: 604 SHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
+++G ++ G + V GF + + +VD+ + G LE+A+++ +
Sbjct: 539 ANLGALETGKHLHCYSVK-SGFSGAASVLNSLVDMYSKCGSLEDAKKVFE 587
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 200/416 (48%), Gaps = 14/416 (3%)
Query: 200 MLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLR 259
+LS C G H+H VI+ G L + N+L+++Y + +A ++F E+ R
Sbjct: 30 ILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH--R 87
Query: 260 DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQ 316
+ MI + A +F +M + P E TF SV+ SC+ LR G +
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 317 AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNE 376
IKTGF+ + V ++ +YS G+ EA +F ++ D +SW +MIS
Sbjct: 148 GSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR 207
Query: 377 TAILTYLKMRRVGIEPDEFTYGSLLGASD--SLQVVEMVHSLLSKIGL-MKVEVLNSLIA 433
A+ Y +M + G+ P+EFT+ LLGAS L+ + +HS + G+ + V + SL+
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVD 267
Query: 434 AYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYX 493
Y + ++ A+++ ++ + + W +++SGF+ N + + F + + L+PN +
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 494 XXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG-VFNAM 552
GKQ+H ++ GF +GNALV MY KC + + VF AM
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 553 VKRDTISWNALISAYAQHGQGKEAVCCFEAM--QISPGIEPDHATFTIVLSACSHV 606
V + +SW LI HG ++ CF + + +EP+ T + VL ACS +
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQD---CFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 183/381 (48%), Gaps = 23/381 (6%)
Query: 286 DMQKACFSPMEATFVSVMSSC--SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGK 343
++QK+C + ++S C +S R+G IK G + N +++Y
Sbjct: 22 NLQKSC--------IRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDG 73
Query: 344 VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+ A+ +F+ M R + +W +MIS F + +A+ + +M G P+EFT+ S++ +
Sbjct: 74 IWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRS 133
Query: 404 SDSLQVVEM---VHSLLSKIGLMKVEVL-NSLIAAYCRNGRINWALQIFSNLPYKSLISW 459
L+ + VH + K G V+ +SL Y + G+ A ++FS+L ISW
Sbjct: 134 CAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISW 193
Query: 460 NTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR 519
+IS + + L+ +S ++ + PN + GK +H I+
Sbjct: 194 TMMISSLVGARKWREALQFYSEMVKAGVPPNEF-TFVKLLGASSFLGLEFGKTIHSNIIV 252
Query: 520 HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCC 579
G + L +LV Y++ ++ ++ V N+ ++D W +++S + ++ + KEAV
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 580 FEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLL 639
F M+ S G++P++ T++ +LS CS V +D G +I + + GF S D + +VD+
Sbjct: 313 FLEMR-SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMY 370
Query: 640 GRSGYLE-EAERLIKGGYFGA 659
+ E EA R+ FGA
Sbjct: 371 MKCSASEVEASRV-----FGA 386
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 319/634 (50%), Gaps = 40/634 (6%)
Query: 128 SWTTMLSASTRL----GHVGDALKLFDQMPN-RSNVAVWNAIITRCGADNGHDDVAFDLF 182
S +T+L TRL V A +FD++P+ R N W+ +I R A N + A DL+
Sbjct: 33 SSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMI-RAYASNDFAEKALDLY 91
Query: 183 RDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNC 241
M GVRP YT+ +L C+ + +D G+ +HS V S F V +L+ Y C
Sbjct: 92 YKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKC 151
Query: 242 GCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA-CFSPMEATFV 300
G + A +VF E+ RD V +NAMI G D +F DM++ SP +T V
Sbjct: 152 GELEMAIKVFDEMPK--RDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIV 209
Query: 301 SV---MSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER 357
+ + +LR G + GF V + +Y+ + A+ +F+ ++
Sbjct: 210 GMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKK 269
Query: 358 DLVSWNIMI-------------SMFFQENLNE-TAILTYLKMRRVGIEPDEFTYGSLLGA 403
+ V+W+ MI +FFQ +N+ A++T + + + + F G L G
Sbjct: 270 NEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARF--GDLSGG 327
Query: 404 SDSLQVVEMVHSLLSKIG-LMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTI 462
VH K G ++ + V N++I+ Y + G + A + FS + K +IS+N++
Sbjct: 328 -------RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSL 380
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
I+G + N P + F + + ++P+ HG HGY + HG+
Sbjct: 381 ITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGY 440
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEA 582
+ S+ NAL+ MY KCG LD + VF+ M KRD +SWN ++ + HG GKEA+ F +
Sbjct: 441 AVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNS 500
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVN-IYGFVPSVDHFSCIVDLLGR 641
MQ G+ PD T +LSACSH GLVD+G ++F+ M + +P +DH++C+ DLL R
Sbjct: 501 MQ-ETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLAR 559
Query: 642 SGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLL 701
+GYL+EA + F + + +L SAC + N LG V++ + S+ VLL
Sbjct: 560 AGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESL-VLL 618
Query: 702 SNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
SN +AA +WE+AA +R + ++ G K PG SW+
Sbjct: 619 SNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 231/536 (43%), Gaps = 58/536 (10%)
Query: 33 SNQHTE-SLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGL 91
SN E +L L+ ++ +S +RP YT + A A R AI G
Sbjct: 80 SNDFAEKALDLYYKMLNS-GVRPTKYTYPFVLKACAGLR---------------AIDDGK 123
Query: 92 KAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQ 151
HSHV S D A+ D Y T ++ + G + A+K+FD+
Sbjct: 124 LIHSHVNCS---------DFAT-----------DMYVCTALVDFYAKCGELEMAIKVFDE 163
Query: 152 MPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI-GVRPDGYTFTSML-SLCSVELL 209
MP R VA WNA+I+ DV LF DM++I G+ P+ T M +L L
Sbjct: 164 MPKRDMVA-WNAMISGFSLHCCLTDV-IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGAL 221
Query: 210 DFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMID 269
G+ VH R GF V ++ +Y C++ A +VF +++ ++ VT++AMI
Sbjct: 222 REGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF-DLDFK-KNEVTWSAMIG 279
Query: 270 GLVRVDRNEDA----FVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKT 322
G V + ++A F M + A +P+ ++ C+ L G ++K
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKA 337
Query: 323 GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTY 382
GF V N ++ Y+ +G + +A F + +D++S+N +I+ E + +
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 383 LKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGL-MKVEVLNSLIAAYCRN 438
+MR GI PD T +L A L + H G + + N+L+ Y +
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKC 457
Query: 439 GRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXX 498
G+++ A ++F + + ++SWNT++ GF +G + L F+++ T + P+
Sbjct: 458 GKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAIL 517
Query: 499 XXXXXXXXXXHGKQVHGYILRHGFS--SEISLGNALVTMYAKCGSLDGSLGVFNAM 552
GKQ+ + R F+ I N + + A+ G LD + N M
Sbjct: 518 SACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 101/245 (41%), Gaps = 43/245 (17%)
Query: 8 RQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASA 67
RQ S I + ++ N L+ + + ES +LF ++ +S +RPD TL +TA +
Sbjct: 364 RQFSE--IGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTS-GIRPDITTLLGVLTACS 420
Query: 68 NTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDY 127
+ A G+ H + + G ++ + N+L+ +Y K L +R F + D
Sbjct: 421 HL----AALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIV 476
Query: 128 SWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK 187
SW TML G +AL LF+ MQ+
Sbjct: 477 SWNTMLFGFGIHGLGKEALSLFNS---------------------------------MQE 503
Query: 188 IGVRPDGYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGF--LARTSVVNSLITMYFNCGCV 244
GV PD T ++LS CS L+D G+ + + + R F + R N + + G +
Sbjct: 504 TGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYL 563
Query: 245 VDAYQ 249
+AY
Sbjct: 564 DEAYD 568
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 278/543 (51%), Gaps = 43/543 (7%)
Query: 232 NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVR---VDRNEDAF-VMFRDM 287
N+L+ Y G + + F ++ RD VT+N +I+G V A+ M RD
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPD--RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDF 133
Query: 288 QKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
T + + SS + +G Q Q IK GF++Y V + + MY+ G +++A
Sbjct: 134 SANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDA 193
Query: 348 QNIFERME------------------------------ERDLVSWNIMISMFFQENLNET 377
+ +F ++ E+D VSW MI Q L +
Sbjct: 194 KKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKE 253
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLMK-VEVLNSLIA 433
AI + +M+ G++ D++ +GS+L A L + + +H+ + + + V ++LI
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 434 AYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYX 493
YC+ +++A +F + K+++SW ++ G+ G + ++ F + + + P+ Y
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 494 XXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMV 553
G Q HG + G +++ N+LVT+Y KCG +D S +FN M
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 554 KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT 613
RD +SW A++SAYAQ G+ E + F+ M + G++PD T T V+SACS GLV+ G
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKM-VQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 614 RIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SLFSACA 672
R F +M + YG VPS+ H+SC++DL RSG LEEA R I G F ++ I W +L SAC
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDA-IGWTTLLSACR 551
Query: 673 AHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGC 732
GNL +G+ A L+E D ++P+ Y LLS+I A+ G+W+ A LR MRE K+PG
Sbjct: 552 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQ 611
Query: 733 SWI 735
SWI
Sbjct: 612 SWI 614
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/547 (24%), Positives = 245/547 (44%), Gaps = 57/547 (10%)
Query: 72 AATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTT 131
A + + +H + IR + + N+++ YA + R F I P+ +SW
Sbjct: 18 ARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNN 77
Query: 132 MLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITR-------CGADNGHDDVAFDLFRD 184
+L A ++ G + + F+++P+R V WN +I A ++ + D +
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGV-TWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136
Query: 185 MQKIGVRPDGYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGC 243
+ ++ T +ML L S + G+ +H VI+ GF + V + L+ MY N GC
Sbjct: 137 LTRV-------TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 244 VVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK-------------- 289
+ DA +VF ++ R+ V YN+++ GL+ EDA +FR M+K
Sbjct: 190 ISDAKKVFYGLDD--RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQ 247
Query: 290 --------ACFSPMEA--------TFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAV 330
CF M+ F SV+ +C L G Q A I+T F + V
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYV 307
Query: 331 NNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGI 390
+A + MY ++ A+ +F+RM+++++VSW M+ + Q E A+ +L M+R GI
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Query: 391 EPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQ 446
+PD +T G + A SL+ H GL+ V V NSL+ Y + G I+ + +
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 447 IFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXX 506
+F+ + + +SW ++S + G ++ ++ F ++ LKP+
Sbjct: 428 LFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 507 XXHGKQVHGYIL-RHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALI 564
G++ + +G I + ++ ++++ G L+ ++ N M D I W L+
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Query: 565 SAYAQHG 571
SA G
Sbjct: 548 SACRNKG 554
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 148/361 (40%), Gaps = 78/361 (21%)
Query: 3 KCWFSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTA 62
KC + + + ++ ++ ++ + E++K+F + S + PDHYTL A
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS-GIDPDHYTLGQA 377
Query: 63 ITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE 122
I+A AN ++ G+Q H AI +GL + V+NSL++LY K D+ R F E+
Sbjct: 378 ISACANV----SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 123 YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLF 182
D SWT M+SA + G + ++LFD+M
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH--------------------------- 466
Query: 183 RDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCG 242
G++PDG T T ++S CS R+G + + L+T
Sbjct: 467 ------GLKPDGVTLTGVISACS---------------RAGLVEKGQRYFKLMT------ 499
Query: 243 CVVDAYQVFGEVEAGLRDHVT-YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
E G+ + Y+ MID R R E+A M F P + +
Sbjct: 500 -----------SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTT 545
Query: 302 VMSSC---SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERD 358
++S+C +L +G A A+S+ + A ++Y+ GK + + M E++
Sbjct: 546 LLSACRNKGNLEIGKWA-AESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKN 604
Query: 359 L 359
+
Sbjct: 605 V 605
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 194/662 (29%), Positives = 324/662 (48%), Gaps = 63/662 (9%)
Query: 132 MLSASTRLGHVGDALKLFDQMP-NRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGV 190
++S +G + A+ L + P + + V WN++I R DNG + LF M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI-RSYGDNGCANKCLYLFGLMHSLSW 123
Query: 191 RPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ 249
PD YTF + C + + G H++ + +GF++ V N+L+ MY C + DA +
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 250 VFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM--QKACFSPMEATFVSVMSSCS 307
VF E+ + D V++N++I+ ++ + + A MF M + C P T V+V+ C+
Sbjct: 184 VFDEMS--VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC-RPDNITLVNVLPPCA 240
Query: 308 SL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
SL +G Q ++ + V N + MY+ G ++EA +F M +D+VSWN
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 365 MISMFFQENLNETAILTYLKMRR-----------------------------------VG 389
M++ + Q E A+ + KM+ G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 390 IEPDEFTYGSLLGASDSLQVV---EMVHSLLSK--IGLMKVE------VLNSLIAAYCRN 438
I+P+E T S+L S+ + + +H K I L K V+N LI Y +
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 439 GRINWALQIFSNLPYKS--LISWNTIISGFLTNGCPLQGLEQFSALL--NTPLKPNAYXX 494
+++ A +F +L K +++W +I G+ +G + LE S + + +PNA+
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 495 XXXXXXXXXXXXXXHGKQVHGYILRHGFSS-EISLGNALVTMYAKCGSLDGSLGVFNAMV 553
GKQ+H Y LR+ ++ + + N L+ MYAKCGS+ + VF+ M+
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 554 KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT 613
++ ++W +L++ Y HG G+EA+ F+ M+ G + D T +VL ACSH G++D G
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMR-RIGFKLDGVTLLVVLYACSHSGMIDQGM 599
Query: 614 RIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAA 673
F+ M ++G P +H++C+VDLLGR+G L A RLI+ + + S C
Sbjct: 600 EYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRI 659
Query: 674 HGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCS 733
HG + LG A + E N+ Y LLSN+ A AG+W++ +R +MR G K+PGCS
Sbjct: 660 HGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCS 719
Query: 734 WI 735
W+
Sbjct: 720 WV 721
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 151/664 (22%), Positives = 272/664 (40%), Gaps = 104/664 (15%)
Query: 16 SSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATA 75
S + N L+ + + + L LF +HS + PD+YT A ++
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSL-SWTPDNYTFPFVFKACGEI----SS 142
Query: 76 TTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSA 135
G HA ++ TG ++ V N+L+++Y++ L+ + F E+ D SW +++ +
Sbjct: 143 VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIES 202
Query: 136 STRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
+LG AL++F +M N + G RPD
Sbjct: 203 YAKLGKPKVALEMFSRMTN--------------------------------EFGCRPDNI 230
Query: 196 TFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV 254
T ++L C S+ G+ +H + S + V N L+ MY CG + +A VF +
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 255 EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK------------------------- 289
++D V++NAM+ G ++ R EDA +F MQ+
Sbjct: 291 S--VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYE 348
Query: 290 ----------ACFSPMEATFVSVMSSCSSL-------RVGCQAQAQSI---KTGFDAYTA 329
+ P E T +SV+S C+S+ + C A I K G
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENM 408
Query: 330 VNNATMTMYSCFGKVNEAQNIFERM--EERDLVSWNIMISMFFQENLNETA--ILTYLKM 385
V N + MY+ KV+ A+ +F+ + +ERD+V+W +MI + Q A +L+ +
Sbjct: 409 VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 386 RRVGIEPDEFTYGSLLGASDSLQVVEM-----VHSLLSKIGLMKVEVLNSLIAAYCRNGR 440
P+ FT L A SL + + ++L ++ + + V N LI Y + G
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS 528
Query: 441 INWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXX 500
I+ A +F N+ K+ ++W ++++G+ +G + L F + K +
Sbjct: 529 ISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 501 XXXXXXXXHGKQVHGYILRHGFSSEISLGN----ALVTMYAKCGSLDGSLGVFNAM-VKR 555
G + Y R +S G LV + + G L+ +L + M ++
Sbjct: 589 CSHSGMIDQGME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEP 645
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
+ W A +S H GK + + A +I+ ++T++ + ++ G D TRI
Sbjct: 646 PPVVWVAFLSCCRIH--GKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Query: 616 FDMM 619
+M
Sbjct: 704 RSLM 707
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 218/462 (47%), Gaps = 31/462 (6%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+S ++ N ++ + + + +L++F+++ + RPD+ TL + P A+
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP------PCAS 241
Query: 75 ATT--FGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
T G QLH A+ + + + V N L+ +YAK + F+ + D SW M
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 133 LSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG 189
++ +++G DA++LF++M + +V W+A I+ A G A + R M G
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY-AQRGLGYEALGVCRQMLSSG 360
Query: 190 VRPDGYTFTSMLSLC-SVELLDFGRHVHSVVI-------RSGFLARTSVVNSLITMYFNC 241
++P+ T S+LS C SV L G+ +H I ++G V+N LI MY C
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 242 GCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFS-PMEATF 299
V A +F + RD VT+ MI G + A + +M ++ C + P T
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 300 VSVMSSCSS---LRVGCQAQAQSIKTGFDAYTA-VNNATMTMYSCFGKVNEAQNIFERME 355
+ +C+S LR+G Q A +++ +A V+N + MY+ G +++A+ +F+ M
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 356 ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL----QVVE 411
++ V+W +++ + E A+ + +MRR+G + D T +L A Q +E
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 412 MVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLP 452
+ + + G+ E L+ R GR+N AL++ +P
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP 642
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 225/518 (43%), Gaps = 63/518 (12%)
Query: 215 VHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV---FGEVEAGLRDHVTYNAMIDGL 271
+H ++ G L ++ + LI+ Y + GC+ A + F +AG+ +N++I
Sbjct: 47 IHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYH---WNSLIRSY 102
Query: 272 VRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYT 328
+F M ++P TF V +C SS+R G A A S+ TGF +
Sbjct: 103 GDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNV 162
Query: 329 AVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKM-RR 387
V NA + MYS +++A+ +F+ M D+VSWN +I + + + A+ + +M
Sbjct: 163 FVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Query: 388 VGIEPDEFTYGSLLGASDSLQ-------------VVEMVHSLL---------SKIGLM-- 423
G PD T ++L SL EM+ ++ +K G+M
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282
Query: 424 -----------KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLT 468
V N+++A Y + GR A+++F + + + ++W+ ISG+
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 469 NGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH-------G 521
G + L +L++ +KPN HGK++H Y +++ G
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNG 402
Query: 522 FSSEISLGNALVTMYAKCGSLDGSLGVFNAMV--KRDTISWNALISAYAQHGQGKEAVCC 579
E + N L+ MYAKC +D + +F+++ +RD ++W +I Y+QHG +A+
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALEL 462
Query: 580 FEAM-QISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMV-NIYGFVPSVDHFSCIVD 637
M + P+ T + L AC+ + + G +I + N VP +C++D
Sbjct: 463 LSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLID 521
Query: 638 LLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHG 675
+ + G + +A RL+ N SL + HG
Sbjct: 522 MYAKCGSISDA-RLVFDNMMAKNEVTWTSLMTGYGMHG 558
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 16/275 (5%)
Query: 382 YLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRI 441
Y+K+ E T + ++ V+++H L G++ + + + LI+ Y G +
Sbjct: 17 YIKVSLFSTSAPEIT-PPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCL 75
Query: 442 NWALQIFSNLPYKS--LISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
+ A+ + P + WN++I + NGC + L F + + P+ Y
Sbjct: 76 SHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFK 135
Query: 500 XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTIS 559
G+ H L GF S + +GNALV MY++C SL + VF+ M D +S
Sbjct: 136 ACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS 195
Query: 560 WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIF--- 616
WN++I +YA+ G+ K A+ F M G PD+ T VL C+ +G G ++
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 617 ---DMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA 648
+M+ N+ FV +C+VD+ + G ++EA
Sbjct: 256 VTSEMIQNM--FVG-----NCLVDMYAKCGMMDEA 283
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 184/623 (29%), Positives = 311/623 (49%), Gaps = 45/623 (7%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLF-- 182
D W +S+ R G +AL++F +MP S+V+ +N +I+ NG ++A LF
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVS-YNGMISGY-LRNGEFELARKLFDE 120
Query: 183 ---RDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYF 239
RD+ V GY L R + ++ + N++++ Y
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGK--------ARELFEIMPERDVCS----WNTMLSGYA 168
Query: 240 NCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATF 299
GCV DA VF + ++ V++NA++ V+ + E+A ++F+ + +
Sbjct: 169 QNGCVDDARSVFDRMPE--KNDVSWNALLSAYVQNSKMEEACMLFKSRE---------NW 217
Query: 300 VSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVN-------NATMTMYSCFGKVNEAQNIFE 352
V +C +G + + I + ++N N +T Y+ GK++EA+ +F+
Sbjct: 218 ALVSWNCL---LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 353 RMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM 412
+D+ +W M+S + Q + E A + KM E +E ++ ++L + +EM
Sbjct: 275 ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEM 330
Query: 413 VHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCP 472
L + V N++I Y + G+I+ A +F +P + +SW +I+G+ +G
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 473 LQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNAL 532
+ L F + + N GKQ+HG +++ G+ + +GNAL
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 533 VTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPD 592
+ MY KCGS++ + +F M +D +SWN +I+ Y++HG G+ A+ FE+M+ G++PD
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK-REGLKPD 509
Query: 593 HATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI 652
AT VLSACSH GLVD G + F M YG +P+ H++C+VDLLGR+G LE+A L+
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
Query: 653 KGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWE 712
K F ++ I +L A HGN L A + + N +YVLLSN+ A++G+W
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWG 629
Query: 713 EAANLRDMMREFGTTKQPGCSWI 735
+ LR MR+ G K PG SWI
Sbjct: 630 DVGKLRVRMRDKGVKKVPGYSWI 652
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/518 (23%), Positives = 231/518 (44%), Gaps = 43/518 (8%)
Query: 99 NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNV 158
N ++ Y + +L F + D SW TMLS + G V DA +FD+MP +++V
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV 189
Query: 159 AVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS--LCSVELLDFGRHVH 216
+ WNA+++ N + A LF+ + + ++ +L + ++++ +
Sbjct: 190 S-WNALLS-AYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFD 243
Query: 217 SVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDR 276
S+ +R N++IT Y G + +A Q+F E+ ++D T+ AM+ G ++
Sbjct: 244 SMNVRD-----VVSWNTIITGYAQSGKIDEARQLFD--ESPVQDVFTWTAMVSGYIQNRM 296
Query: 277 NEDAFVMFRDM---QKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVN-- 331
E+A +F M + ++ M A +V + + K FD N
Sbjct: 297 VEEARELFDKMPERNEVSWNAMLAGYVQ------------GERMEMAKELFDVMPCRNVS 344
Query: 332 --NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
N +T Y+ GK++EA+N+F++M +RD VSW MI+ + Q + A+ +++M R G
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 390 IEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWAL 445
+ ++ S L + +E+ +H L K G V N+L+ YC+ G I A
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 446 QIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXX 505
+F + K ++SWNT+I+G+ +G L F ++ LKP+
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524
Query: 506 XXXHGKQ-VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNAL 563
G+Q + +G +V + + G L+ + + M + D W L
Sbjct: 525 LVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 584
Query: 564 ISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLS 601
+ A HG + A + + +EP+++ ++LS
Sbjct: 585 LGASRVHGNTELAETAADKI---FAMEPENSGMYVLLS 619
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 40/227 (17%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
++A ++S E+L+LF Q+ R + + S+A++ A+ A G QLH
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADV----VALELGKQLHGR 434
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
++ G + V N+LL +Y K + F E+ D SW TM++ +R
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR------- 487
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
+G +VA F M++ G++PD T ++LS CS
Sbjct: 488 --------------------------HGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Query: 206 -VELLDFGR-HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
L+D GR + +++ G + + ++ + G + DA+ +
Sbjct: 522 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNL 568
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 206/703 (29%), Positives = 334/703 (47%), Gaps = 57/703 (8%)
Query: 82 LHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGH 141
H +A + GL VA +L+++Y K + + F E+ Y D W ML A +G
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 142 VGDALKLFDQM------PNRSNVAVWNAIITRCGAD-----------NGHD-----DVAF 179
+A+ L PN + ++ R D NG+D ++ F
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLR----LLARISGDDSDAGQVKSFANGNDASSVSEIIF 282
Query: 180 ------------------DLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVI 220
F DM + V D TF ML+ V+ L G+ VH + +
Sbjct: 283 RNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 221 RSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDA 280
+ G +V NSLI MY A VF + RD +++N++I G+ + +A
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE--RDLISWNSVIAGIAQNGLEVEA 400
Query: 281 FVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC----QAQAQSIKTGFDAYTAVNNATMT 336
+F + + P + T SV+ + SSL G Q +IK + + V+ A +
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID 460
Query: 337 MYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFT 396
YS + EA+ +FER DLV+WN M++ + Q + + + M + G D+FT
Sbjct: 461 AYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 397 YGSLLGASDSLQVV---EMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLP 452
++ L + + VH+ K G + + V + ++ Y + G ++ A F ++P
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 453 YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQ 512
++W T+ISG + NG + FS + + P+ + G+Q
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639
Query: 513 VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQ 572
+H L+ +++ +G +LV MYAKCGS+D + +F + + +WNA++ AQHG+
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 573 GKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHF 632
GKE + F+ M+ S GI+PD TF VLSACSH GLV + + M YG P ++H+
Sbjct: 700 GKETLQLFKQMK-SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 633 SCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDH 692
SC+ D LGR+G +++AE LI+ A++++ +L +AC G+ G+ VA LLE +
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEP 818
Query: 693 NNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ S YVLLSN+ AAA +W+E R MM+ K PG SWI
Sbjct: 819 LDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 150/609 (24%), Positives = 249/609 (40%), Gaps = 84/609 (13%)
Query: 16 SSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATA 75
S +I+ N L+ S Q++ LK F + S + D T + + A
Sbjct: 276 SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVES-DVECDQVTFILMLATAVKVDSLA-- 332
Query: 76 TTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSA 135
G Q+H A++ GL V+NSL+++Y K
Sbjct: 333 --LGQQVHCMALKLGLDLMLTVSNSLINMYCK---------------------------- 362
Query: 136 STRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
L G A +FD M R ++ WN++I A NG + A LF + + G++PD Y
Sbjct: 363 ---LRKFGFARTVFDNMSERDLIS-WNSVIAGI-AQNGLEVEAVCLFMQLLRCGLKPDQY 417
Query: 196 TFTSMLSLCS--VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
T TS+L S E L + VH I+ ++ + V +LI Y C+ +A +F
Sbjct: 418 TMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-- 475
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLR 310
E D V +NAM+ G + +F M K + T +V +C ++
Sbjct: 476 -ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFF 370
G Q A +IK+G+D V++ + MY G ++ AQ F+ + D V+W MIS
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLLSKIGLMKVE- 426
+ E A + +MR +G+ PDEFT +L AS L +E +H+ K+
Sbjct: 595 ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF 654
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
V SL+ Y + G I+ A +F + ++ +WN ++ G +G + L+ F + +
Sbjct: 655 VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG 714
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSL 546
+KP+ G S S + Y S+ G
Sbjct: 715 IKPDKVTFI-------------------------GVLSACSHSGLVSEAYKHMRSMHGDY 749
Query: 547 GVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
G +K + ++ L A + G K+A E+M +E + + +L+AC
Sbjct: 750 G-----IKPEIEHYSCLADALGRAGLVKQAENLIESM----SMEASASMYRTLLAACRVQ 800
Query: 607 GLVDDGTRI 615
G + G R+
Sbjct: 801 GDTETGKRV 809
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 219/510 (42%), Gaps = 56/510 (10%)
Query: 122 EYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAII------TRCGADNGHD 175
E P+ + ++S ++ G + A ++FD+MP+R V+ WN+I+ + C +N
Sbjct: 70 ENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS-WNSILAAYAQSSECVVENIQQ 128
Query: 176 DVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFG-----RHVHSVVIRSGFLARTSV 230
AF LFR +++ V T + ML LC L G H + G V
Sbjct: 129 --AFLLFRILRQDVVYTSRMTLSPMLKLC----LHSGYVWASESFHGYACKIGLDGDEFV 182
Query: 231 VNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
+L+ +Y G V + +F E+ RD V +N M+ + + E+A + +
Sbjct: 183 AGALVNIYLKFGKVKEGKVLFEEMP--YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 291 CFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNI 350
+P E T + +++ S G + A +K+ F N+A ++
Sbjct: 241 GLNPNEIT-LRLLARIS----GDDSDAGQVKS------------------FANGNDASSV 277
Query: 351 FERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS---DSL 407
E ++ N +S + + + M +E D+ T+ +L + DSL
Sbjct: 278 SE------IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 408 QVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGF 466
+ + VH + K+GL + + V NSLI YC+ + +A +F N+ + LISWN++I+G
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 467 LTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXH-GKQVHGYILRHGFSSE 525
NG ++ + F LL LKP+ Y KQVH + ++ S+
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 526 ISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQI 585
+ AL+ Y++ + + +F D ++WNA+++ Y Q G + + F M
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMH- 509
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
G D T V C + ++ G ++
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 186/409 (45%), Gaps = 49/409 (11%)
Query: 209 LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMI 268
L G+ H+ ++ ++N+LI+MY CG + A +VF ++ RD V++N+++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD--RDLVSWNSIL 112
Query: 269 DGLVR-----VDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSI--- 320
+ V+ + AF++FR +++ T ++ C L G ++S
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC--LHSGYVWASESFHGY 170
Query: 321 --KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETA 378
K G D V A + +Y FGKV E + +FE M RD+V WN+M+ + + E A
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 379 ILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKV-EVL--NSLIAAY 435
I G+ P+E T L S V S + V E++ N ++ Y
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEY 290
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
+G+ + L+ F+++ +S + + + F +L T +K ++
Sbjct: 291 LHSGQYSALLKCFADM-VESDVECDQVT---------------FILMLATAVKVDSLAL- 333
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
G+QVH L+ G +++ N+L+ MY K + VF+ M +R
Sbjct: 334 --------------GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSER 379
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
D ISWN++I+ AQ+G EAVC F + + G++PD T T VL A S
Sbjct: 380 DLISWNSVIAGIAQNGLEVEAVCLFMQL-LRCGLKPDQYTMTSVLKAAS 427
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 510 GKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQ 569
GK H IL + E L N L++MY+KCGSL + VF+ M RD +SWN++++AYAQ
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 570 HGQG-----KEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLV 609
+ ++A F ++ + T + +L C H G V
Sbjct: 118 SSECVVENIQQAFLLFRILR-QDVVYTSRMTLSPMLKLCLHSGYV 161
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 201/678 (29%), Positives = 324/678 (47%), Gaps = 89/678 (13%)
Query: 97 VANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRS 156
VAN LL +Y+++ + F E+ + +SW TM+ G G +L+ FD MP R
Sbjct: 64 VANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERD 123
Query: 157 NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVH 216
+ WN +++ A G VA LF M P+ T
Sbjct: 124 GYS-WNVVVSGF-AKAGELSVARRLFNAM------PEKDVVT------------------ 157
Query: 217 SVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVD- 275
+NSL+ Y G +A ++F E+ D +T ++ ++
Sbjct: 158 --------------LNSLLHGYILNGYAEEALRLFKELNFSA-DAITLTTVLKACAELEA 202
Query: 276 ----RNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVN 331
+ A ++ ++ C S M ++ V+V + C LR+ Q I+ D +
Sbjct: 203 LKCGKQIHAQILIGGVE--CDSKMNSSLVNVYAKCGDLRMASYMLEQ-IREPDDHSLS-- 257
Query: 332 NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIE 391
A ++ Y+ G+VNE++ +F+R R ++ WN MIS + N+ A++ + +MR E
Sbjct: 258 -ALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE 316
Query: 392 PDEFTYGSLLGASDSLQVVE---MVHSLLSKIGLM------------------------- 423
D T +++ A L +E +H K GL+
Sbjct: 317 -DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 424 --KVE-----VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGL 476
+VE +LNS+I Y GRI+ A ++F + KSLISWN++ +GF NGC ++ L
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 477 EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMY 536
E F + L + G+QV G S+ + ++L+ +Y
Sbjct: 436 EYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY 495
Query: 537 AKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATF 596
KCG ++ VF+ MVK D + WN++IS YA +GQG EA+ F+ M ++ GI P TF
Sbjct: 496 CKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVA-GIRPTQITF 554
Query: 597 TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGY 656
+VL+AC++ GLV++G ++F+ M +GFVP +HFSC+VDLL R+GY+EEA L++
Sbjct: 555 MVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614
Query: 657 FGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAAN 716
F + ++ S+ C A+G +G+ A ++E + N YV LS I A +G WE +A
Sbjct: 615 FDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSAL 674
Query: 717 LRDMMREFGTTKQPGCSW 734
+R +MRE TK PG SW
Sbjct: 675 VRKLMRENNVTKNPGSSW 692
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 233/505 (46%), Gaps = 60/505 (11%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + ++ LN LL + E+L+LF +++ S D TL+T + A A
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS----ADAITLTTVLKACAELE---- 201
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A G Q+HA + G++ S + +SL+++YAK DL +I PDD+S + ++S
Sbjct: 202 ALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALIS 261
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
G V ++ LFD+ NR V +WN++I+ A+N + A LF +M+ R D
Sbjct: 262 GYANCGRVNESRGLFDRKSNRC-VILWNSMISGYIANNMKME-ALVLFNEMRN-ETREDS 318
Query: 195 YTFTSMLSLC-SVELLDFGRHVH----------SVVIRSGFLA----------------- 226
T ++++ C + L+ G+ +H +V+ S L
Sbjct: 319 RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSE 378
Query: 227 ----RTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFV 282
T ++NS+I +YF+CG + DA +VF +E + +++N+M +G + +
Sbjct: 379 VESYDTILLNSMIKVYFSCGRIDDAKRVFERIEN--KSLISWNSMTNGFSQNGCTVETLE 436
Query: 283 MFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYS 339
F M K E + SV+S+C SSL +G Q A++ G D+ V+++ + +Y
Sbjct: 437 YFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYC 496
Query: 340 CFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGS 399
G V + +F+ M + D V WN MIS + AI + KM GI P + T+
Sbjct: 497 KCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMV 556
Query: 400 LLGASDSLQVVEMVHSLLSKIGLMKV--------EVLNSLIAAYCRNGRINWALQIFSNL 451
+L A + +VE L MKV E + ++ R G + A+ + +
Sbjct: 557 VLTACNYCGLVEEGRKLFES---MKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM 613
Query: 452 PYKSLIS-WNTIISGFLTNGCPLQG 475
P+ S W++I+ G + NG G
Sbjct: 614 PFDVDGSMWSSILRGCVANGYKAMG 638
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 158/388 (40%), Gaps = 76/388 (19%)
Query: 299 FVSVMSSCSSLR---VGCQAQAQSIKTGF-DAYTAVNNATMTMYSCFGKVNEAQNIFERM 354
+V ++ SCSS + Q +K GF + V N + MYS GK+ A+N+F+ M
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 355 EERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVH 414
+R+ SWN MI + +N T L+ + E D +++
Sbjct: 89 PDRNYFSWNTMIEGY----MNSGEKGTSLRFFDMMPERDGYSW----------------- 127
Query: 415 SLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQ 474
N +++ + + G ++ A ++F+ +P K +++ N+++ G++ NG +
Sbjct: 128 --------------NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEE 173
Query: 475 GLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVT 534
L F L +A GKQ+H IL G + + ++LV
Sbjct: 174 ALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVN 230
Query: 535 MYAKCGSL-------------------------------DGSLGVFNAMVKRDTISWNAL 563
+YAKCG L + S G+F+ R I WN++
Sbjct: 231 VYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSM 290
Query: 564 ISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIY 623
IS Y + EA+ F M+ D T V++AC +G ++ G ++ +
Sbjct: 291 ISGYIANNMKMEALVLFNEMRNET--REDSRTLAAVINACIGLGFLETGKQMHCHACK-F 347
Query: 624 GFVPSVDHFSCIVDLLGRSGYLEEAERL 651
G + + S ++D+ + G EA +L
Sbjct: 348 GLIDDIVVASTLLDMYSKCGSPMEACKL 375
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 511 KQVHGYILRHGF-SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQ 569
+Q +G +L+ GF SS + + N L+ MY++ G + + +F+ M R+ SWN +I Y
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 570 HGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSV 629
G+ ++ F+ M E D ++ +V+S + G + R+F+ M P
Sbjct: 106 SGEKGTSLRFFDMMP-----ERDGYSWNVVVSGFAKAGELSVARRLFNAM-------PEK 153
Query: 630 DHFSCIVDLLGR--SGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMV-ARL 686
D + L G +GY EEA RL K F A++ ++ ACA L+ G+ + A++
Sbjct: 154 DVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQI 213
Query: 687 LLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
L+ + + L N+ A G A+ + + +RE
Sbjct: 214 LIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/611 (28%), Positives = 310/611 (50%), Gaps = 15/611 (2%)
Query: 130 TTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG 189
T ++S G+ DA +FDQ+P + +W ++ RC N L+ + K G
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIP-EPDFYLWKVML-RCYCLNKESVEVVKLYDLLMKHG 137
Query: 190 VRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAY 248
R D F+ L C+ ++ LD G+ +H +++ V+ L+ MY CG + A+
Sbjct: 138 FRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAH 196
Query: 249 QVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC-- 306
+VF ++ LR+ V + +MI G V+ D E+ V+F M++ E T+ +++ +C
Sbjct: 197 KVFNDIT--LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTK 254
Query: 307 -SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIM 365
S+L G +K+G + + + + + MY G ++ A+ +F DLV W M
Sbjct: 255 LSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAM 314
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIGL 422
I + A+ + KM+ V I+P+ T S+L G ++L++ VH L K+G+
Sbjct: 315 IVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI 374
Query: 423 MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL 482
V N+L+ Y + + A +F K +++WN+IISGF NG + L F +
Sbjct: 375 WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Query: 483 LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF--SSEISLGNALVTMYAKCG 540
+ + PN G +H Y ++ GF SS + +G AL+ YAKCG
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Query: 541 SLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
+ +F+ + +++TI+W+A+I Y + G ++ FE M + +P+ +TFT +L
Sbjct: 495 DPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEM-LKKQQKPNESTFTSIL 553
Query: 601 SACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGAN 660
SAC H G+V++G + F M Y F PS H++C+VD+L R+G LE+A +I+ +
Sbjct: 554 SACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPD 613
Query: 661 SNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDM 720
+ C H LG +V + +L+ ++ S YVL+SN+ A+ G+W +A +R++
Sbjct: 614 VRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNL 673
Query: 721 MREFGTTKQPG 731
M++ G +K G
Sbjct: 674 MKQRGLSKIAG 684
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 184/384 (47%), Gaps = 47/384 (12%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
++A +++ E L LF ++ ++ L + YT T I A +A G H
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVL-GNEYTYGTLIMACTKL----SALHQGKWFHGC 267
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
+++G++ S + SLL +Y K D+++ R F E + D WT M+ T G V +A
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
L LF + M+ + ++P+ T S+LS C
Sbjct: 328 LSLFQK---------------------------------MKGVEIKPNCVTIASVLSGCG 354
Query: 206 -VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTY 264
+E L+ GR VH + I+ G + T+V N+L+ MY C DA VF E+E+ +D V +
Sbjct: 355 LIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVF-EMESE-KDIVAW 411
Query: 265 NAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIK 321
N++I G + +A +F M +P T S+ S+C+ SL VG A S+K
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK 471
Query: 322 TGFDAYTAVN--NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
GF A ++V+ A + Y+ G A+ IF+ +EE++ ++W+ MI + ++ ++
Sbjct: 472 LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSL 531
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGA 403
+ +M + +P+E T+ S+L A
Sbjct: 532 ELFEEMLKKQQKPNESTFTSILSA 555
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 179/416 (43%), Gaps = 40/416 (9%)
Query: 302 VMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS 361
++S C+++ Q+ G ++ +++Y FG +A+ +F+++ E D
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLLS 418
W +M+ + + + Y + + G D+ + L A LQ ++ +H L
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 419 KIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQ 478
K+ VL L+ Y + G I A ++F+++ ++++ W ++I+G++ N +GL
Sbjct: 170 KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK 538
F+ + + N Y GK HG +++ G L +L+ MY K
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 539 CGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTI 598
CG + + VFN D + W A+I Y +G EA+ F+ M+ I+P+ T
Sbjct: 290 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK-GVEIKPNCVTIAS 348
Query: 599 VLSACS----------------HVGLVDDGTRIFDMMVNIYG---------FVPSVDH-- 631
VLS C VG+ D T + + +V++Y +V ++
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGIWD--TNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 632 ----FSCIVDLLGRSGYLEEAERL---IKGGYFGANSNICWSLFSACAAHGNLRLG 680
++ I+ ++G + EA L + N SLFSACA+ G+L +G
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 16 SSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATA 75
S + I+ N +++ +++ E+L LF +++S ++ P+ T+++ +A A+ A
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS-ESVTPNGVTVASLFSACASLGSLAV- 461
Query: 76 TTFGNQLHAHAIRTGLKAHS--HVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
G+ LHA++++ G A S HV +LL YAK D S F IE + +W+ M+
Sbjct: 462 ---GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 134 SASTRLGHVGDALKLFDQM---PNRSNVAVWNAIITRCG 169
+ G +L+LF++M + N + + +I++ CG
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACG 557
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 213/701 (30%), Positives = 344/701 (49%), Gaps = 59/701 (8%)
Query: 55 DHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASV 114
D YT S+ + A A T+ G +H H IR + V NSL+++Y
Sbjct: 106 DAYTYSSTLKACAETKNLKA----GKAVHCHLIRCLQNSSRVVHNSLMNMYVSC------ 155
Query: 115 ERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGH 174
+ PD + + + K+FD M R NV WN +I+ G
Sbjct: 156 ------LNAPDCFEYDVVR-------------KVFDNM-RRKNVVAWNTLISWY-VKTGR 194
Query: 175 DDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVEL-LDFGRHVHSVVIRSG--FLARTSVV 231
+ A F M ++ V+P +F ++ S+ + + ++++ G ++ VV
Sbjct: 195 NAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVV 254
Query: 232 NSLITMYFNCGCVVDAYQVFGE-VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM--Q 288
+S I+MY G + + +VF VE R+ +N MI V+ D ++ +F +
Sbjct: 255 SSAISMYAELGDIESSRRVFDSCVE---RNIEVWNTMIGVYVQNDCLVESIELFLEAIGS 311
Query: 289 KACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVN 345
K S E T++ S+ S+L+ +G Q K + + N+ M MYS G V+
Sbjct: 312 KEIVSD-EVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVH 370
Query: 346 EAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASD 405
++ +F M ERD+VSWN MIS F Q L++ ++ +M++ G + D T +LL A+
Sbjct: 371 KSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAAS 430
Query: 406 SLQVVEM---VHSLLSKIGLMKVEVLNS-LIAAYCRNGRINWALQIFSNLPY--KSLISW 459
+L+ E+ H+ L + G+ + E +NS LI Y ++G I + ++F Y + +W
Sbjct: 431 NLRNKEIGKQTHAFLIRQGI-QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATW 489
Query: 460 NTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR 519
N++ISG+ NG + F +L ++PNA GKQ+HG+ +R
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 520 HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCC 579
+ + +ALV MY+K G++ + +F+ +R+++++ +I Y QHG G+ A+
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 580 FEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLL 639
F +MQ S GI+PD TF VLSACS+ GL+D+G +IF+ M +Y PS +H+ CI D+L
Sbjct: 610 FLSMQES-GIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDML 668
Query: 640 GRSGYLEEAERLIKGGYFGANSNIC--W-SLFSACAAHGNLRLGRMVARLL--LEKDHNN 694
GR G + EA +KG G NI W SL +C HG L L V+ L +K N
Sbjct: 669 GRVGRVNEAYEFVKG--LGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNF 726
Query: 695 PSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
VLLSN+ A +W+ +R MRE G K+ G S I
Sbjct: 727 SGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 10/233 (4%)
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
+ S ++ C++G A Q+F +P + + WNTII GF+ N P + L +S + T
Sbjct: 42 IRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAP 101
Query: 488 KPN--AYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK------C 539
N AY GK VH +++R +S + N+L+ MY C
Sbjct: 102 FTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDC 161
Query: 540 GSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIV 599
D VF+ M +++ ++WN LIS Y + G+ EA F M + ++P +F V
Sbjct: 162 FEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIM-MRMEVKPSPVSFVNV 220
Query: 600 LSACSHVGLVDDGTRIFDMMVNIYG-FVPSVDHFSCIVDLLGRSGYLEEAERL 651
A S + + +M+ + +V + S + + G +E + R+
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRV 273
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 200/737 (27%), Positives = 349/737 (47%), Gaps = 90/737 (12%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ ++ N++++ L R ++L ++ ++ L P +TL++ ++A +
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL-PSRFTLASVLSACSKVLDG-- 154
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVE-RAFAEIEYPDDYSWTTML 133
FG + H A++TGL + V N+LLS+YAK + R F + P++ S+T ++
Sbjct: 155 --VFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
R V +A+++F R M + GV+ D
Sbjct: 213 GGLARENKVLEAVQMF---------------------------------RLMCEKGVQVD 239
Query: 194 GYTFTSMLS----------LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGC 243
+++LS L + + G+ +H + +R GF + NSL+ +Y
Sbjct: 240 SVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKD 299
Query: 244 VVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM 303
+ A +F E+ + V++N MI G + R++ + M+ + F P E T +SV+
Sbjct: 300 MNGAELIFAEMPE--VNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVL 357
Query: 304 SSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
+C F + G V + IF + + + +WN
Sbjct: 358 GAC-----------------FRS---------------GDVETGRRIFSSIPQPSVSAWN 385
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLLSKI 420
M+S + E AI + +M+ ++PD+ T +L + L+ +E +H ++ +
Sbjct: 386 AMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT 445
Query: 421 GLMK-VEVLNSLIAAYCRNGRINWALQIFSN-LPYKSLISWNTIISGFLTNGCPLQGLEQ 478
+ K +++ LIA Y ++ + IF + + + WN++ISGF N + L
Sbjct: 446 EISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALIL 505
Query: 479 FSALLNTP-LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYA 537
F + T L PN HG+Q HG +++ G+ S+ + AL MY
Sbjct: 506 FRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYC 565
Query: 538 KCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFT 597
KCG +D + F+A+++++T+ WN +I Y +G+G EAV + M IS G +PD TF
Sbjct: 566 KCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM-ISSGEKPDGITFV 624
Query: 598 IVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYF 657
VL+ACSH GLV+ G I M I+G P +DH+ CIVD LGR+G LE+AE+L + +
Sbjct: 625 SVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPY 684
Query: 658 GANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANL 717
++S + L S+C HG++ L R VA L+ D + + YVLLSN ++ QW+++A L
Sbjct: 685 KSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAAL 744
Query: 718 RDMMREFGTTKQPGCSW 734
+ +M + K PG SW
Sbjct: 745 QGLMNKNRVHKTPGQSW 761
Score = 223 bits (567), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 281/590 (47%), Gaps = 55/590 (9%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G +H +R G+K+ +++ N LL LY + D + F E+ D YSW L+ +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
+G +G+A ++FD MP R +V WN +I+ G ++ A +++ M G P +T
Sbjct: 85 VGDLGEACEVFDGMPER-DVVSWNNMISVL-VRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 199 SMLSLCSVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD-AYQVFGEVE 255
S+LS CS ++LD FG H V +++G V N+L++MY CG +VD +VF +
Sbjct: 143 SVLSACS-KVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS 201
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC-- 313
+ V+Y A+I GL R ++ +A MFR M + +++ +S + S S+ R GC
Sbjct: 202 QP--NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQ-VDSVCLSNILSISAPREGCDS 258
Query: 314 -----------QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSW 362
Q +++ GF +NN+ + +Y+ +N A+ IF M E ++VSW
Sbjct: 259 LSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSW 318
Query: 363 NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGL 422
NIMI F QE ++ ++ +MR G +P+E T S+LGA
Sbjct: 319 NIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC------------------ 360
Query: 423 MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL 482
R+G + +IFS++P S+ +WN ++SG+ + + F +
Sbjct: 361 -------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 483 LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSL 542
LKP+ GKQ+HG ++R S + + L+ +Y++C +
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 543 DGSLGVFNAMVKR-DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLS 601
+ S +F+ + D WN++IS + + +A+ F M + + P+ +F VLS
Sbjct: 468 EISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLS 527
Query: 602 ACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
+CS + + G R F +V G+V + + D+ + G ++ A +
Sbjct: 528 SCSRLCSLLHG-RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQF 576
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 167/371 (45%), Gaps = 64/371 (17%)
Query: 13 TTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPA 72
++I + N +L+ + + E++ F Q+ L+PD TLS +++ A R
Sbjct: 374 SSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF-QNLKPDKTTLSVILSSCARLRFL 432
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
G Q+H IRT + +SH+ + L+++Y++ E + E
Sbjct: 433 EG----GKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISE----------------- 471
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR- 191
+FD N ++A WN++I+ N D A LFR M + V
Sbjct: 472 --------------CIFDDCINELDIACWNSMISGF-RHNMLDTKALILFRRMHQTAVLC 516
Query: 192 PDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
P+ +F ++LS CS + L GR H +V++SG+++ + V +L MY CG + A Q
Sbjct: 517 PNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQF 576
Query: 251 FGEVEAGLRDH-VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
F +A LR + V +N MI G R ++A ++R M + P TFVSV+++CS
Sbjct: 577 F---DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACS-- 631
Query: 310 RVGCQAQAQSIKTGFDAYTAVN-----NATMTMYSCF-------GKVNEAQNIFERMEER 357
+ ++TG + +++ + Y C G++ +A+ + E +
Sbjct: 632 ------HSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYK 685
Query: 358 -DLVSWNIMIS 367
V W I++S
Sbjct: 686 SSSVLWEILLS 696
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 303/611 (49%), Gaps = 21/611 (3%)
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSM 200
+G A +LFD+MP R N+ +N++I+ G + A +LF + ++ ++ D +T+
Sbjct: 97 ELGFARQLFDRMPER-NIISFNSLISGY-TQMGFYEQAMELFLEAREANLKLDKFTYAGA 154
Query: 201 LSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLR 259
L C LD G +H +V+ +G + ++N LI MY CG + A +F + R
Sbjct: 155 LGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE--R 212
Query: 260 DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC------SSLRVGC 313
D V++N++I G VRV E+ + M + + SV+ +C + G
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGM 272
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQ-- 371
+ K G + V A + MY+ G + EA +F M +++V++N MIS F Q
Sbjct: 273 AIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMD 332
Query: 372 ---ENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLLSKIGLMKV 425
+ + A ++ M+R G+EP T+ +L A + + +E +H+L+ K
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 426 EVLNS-LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
E + S LI Y G +Q F++ + + SW ++I + N + F L +
Sbjct: 393 EFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFS 452
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
+ ++P Y G+Q+ GY ++ G + S+ + ++MYAK G++
Sbjct: 453 SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPL 512
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+ VF + D +++A+IS+ AQHG EA+ FE+M+ + GI+P+ F VL AC
Sbjct: 513 ANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMK-THGIKPNQQAFLGVLIACC 571
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNIC 664
H GLV G + F M N Y P+ HF+C+VDLLGR+G L +AE LI F +
Sbjct: 572 HGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTW 631
Query: 665 WSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREF 724
+L S+C + + +G+ VA L+E + YVLL NI +G A +R++MR+
Sbjct: 632 RALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDR 691
Query: 725 GTTKQPGCSWI 735
G K+P SWI
Sbjct: 692 GVKKEPALSWI 702
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 220/460 (47%), Gaps = 27/460 (5%)
Query: 211 FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDG 270
G+ H +I+S ++N+L+ MY C + A Q+F + R+ +++N++I G
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPE--RNIISFNSLISG 122
Query: 271 LVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAY 327
++ E A +F + ++A + T+ + C L +G + G
Sbjct: 123 YTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQ 182
Query: 328 TAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
+ N + MYS GK+++A ++F+R +ERD VSWN +IS + + E + KM R
Sbjct: 183 VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242
Query: 388 VGIEPDEFTYGSLLGA------SDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGR 440
G+ + GS+L A ++ +H +K+G+ + V +L+ Y +NG
Sbjct: 243 DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302
Query: 441 INWALQIFSNLPYKSLISWNTIISGFL-----TNGCPLQGLEQFSALLNTPLKPNAYXXX 495
+ A+++FS +P K+++++N +ISGFL T+ + + F + L+P+
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
+G+Q+H I ++ F S+ +G+AL+ +YA GS + + F + K+
Sbjct: 363 VVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 422
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
D SW ++I + Q+ Q + A F + S I P+ T ++++SAC+ + G +I
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQL-FSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 616 FDMMVNIYGFVPSVDHFSCI----VDLLGRSGYLEEAERL 651
Y +D F+ + + + +SG + A ++
Sbjct: 482 -----QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 160/320 (50%), Gaps = 13/320 (4%)
Query: 308 SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMIS 367
S+ +G A IK+ + + N + MY ++ A+ +F+RM ER+++S+N +IS
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 368 MFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS---LQVVEMVHSLLSKIGL-M 423
+ Q E A+ +L+ R ++ D+FTY LG L + E++H L+ GL
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 424 KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALL 483
+V ++N LI Y + G+++ A+ +F + +SWN++ISG++ G + L + +
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 484 NTPLKPNAYXXXXXXXX---XXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
L Y G +H Y + G +I + AL+ MYAK G
Sbjct: 242 RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNG 301
Query: 541 SLDGSLGVFNAMVKRDTISWNALISAYAQHGQ-----GKEAVCCFEAMQISPGIEPDHAT 595
SL ++ +F+ M ++ +++NA+IS + Q + EA F MQ G+EP +T
Sbjct: 302 SLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ-RRGLEPSPST 360
Query: 596 FTIVLSACSHVGLVDDGTRI 615
F++VL ACS ++ G +I
Sbjct: 361 FSVVLKACSAAKTLEYGRQI 380
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 22/220 (10%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAA 73
+ S + I ++ ++ Q + LF Q+ SSH +RP+ YT+S ++A A+
Sbjct: 418 STSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH-IRPEEYTVSLMMSACADF---- 472
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
A + G Q+ +AI++G+ A + V S +S+YAK+ ++ + F E++ PD +++ M+
Sbjct: 473 AALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMI 532
Query: 134 SASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK-IG 189
S+ + G +AL +F+ M + N + ++ C G F+ M+
Sbjct: 533 SSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC-CHGGLVTQGLKYFQCMKNDYR 591
Query: 190 VRPDGYTFTSMLSLCSVELLDFGR-----HVHSVVIRSGF 224
+ P+ FT C V+LL GR ++++ SGF
Sbjct: 592 INPNEKHFT-----CLVDLL--GRTGRLSDAENLILSSGF 624
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 197/688 (28%), Positives = 343/688 (49%), Gaps = 35/688 (5%)
Query: 76 TTFGNQLHAHAIRTG------LKAHSHVANSLLSLYAKAEDLASVERAF----------- 118
+ G+ LH+ I+ G + +A+S++ L K + ++RA
Sbjct: 66 VSMGSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGA 125
Query: 119 -AEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDV 177
A E P Y+ ++S R G + A K+FD+MP+R NV +NA+ + +
Sbjct: 126 GAATESP--YANNNLISMYVRCGSLEQARKVFDKMPHR-NVVSYNALYSAYSRNPDFASY 182
Query: 178 AFDLFRDMQKIGVRPDGYTFTSMLSLCSV-ELLDFGRHVHSVVIRSGFLARTSVVNSLIT 236
AF L M V+P+ TFTS++ +C+V E + G ++S +I+ G+ V S++
Sbjct: 183 AFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLG 242
Query: 237 MYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPME 296
MY +CG + A ++F V RD V +N MI G ++ D+ ED + FR+M + P +
Sbjct: 243 MYSSCGDLESARRIFDCVNN--RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQ 300
Query: 297 ATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
T+ V++ CS L +G A+ I + A ++NA + MY G + EA +F R
Sbjct: 301 FTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGR 360
Query: 354 MEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGI-EPDEFTYGSLLGASDSLQVV-- 410
+ +LVSWN +IS + E A+L Y ++ R+ PDE+T+ + + A+ +
Sbjct: 361 IHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVH 420
Query: 411 -EMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLT 468
+++H ++K+G + V V +L++ Y +N A ++F + + ++ W +I G
Sbjct: 421 GKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSR 480
Query: 469 NGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISL 528
G ++ F + + + + G+ H +R GF +S+
Sbjct: 481 LGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSV 540
Query: 529 GNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPG 588
ALV MY K G + + +F+ D WN+++ AY+QHG ++A+ FE + + G
Sbjct: 541 CGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQI-LENG 599
Query: 589 IEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA 648
PD T+ +L+ACSH G G +++ M G H+SC+V+L+ ++G ++EA
Sbjct: 600 FMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEA 658
Query: 649 ERLIKGGYFGANSNICW-SLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAA 707
LI+ G N W +L SAC NL++G A +L+ D + + ++LLSN+ A
Sbjct: 659 LELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAV 718
Query: 708 AGQWEEAANLRDMMREFGTTKQPGCSWI 735
G+WE+ A +R +R ++K PG SWI
Sbjct: 719 NGRWEDVAEMRRKIRGLASSKDPGLSWI 746
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 169/632 (26%), Positives = 291/632 (46%), Gaps = 39/632 (6%)
Query: 119 AEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVW--NAIITRCGADNGHDD 176
A EYP Y+ ++S R + A K+FD+MP R+ V ++ +A+ +
Sbjct: 17 AAAEYP--YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHS 74
Query: 177 VAFDLFRDMQKIGVRPDGYTFTSMLSL----CSVELLDFGRHVHSVVIRSGFLARTS--- 229
L Q I P +S++ L S+ +L R +H++V+ +G A T
Sbjct: 75 QIIKL-GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPY 133
Query: 230 VVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNED----AFVMFR 285
N+LI+MY CG + A +VF ++ R+ V+YNA+ RN D AF +
Sbjct: 134 ANNNLISMYVRCGSLEQARKVFDKMPH--RNVVSYNALYSAY---SRNPDFASYAFPLTT 188
Query: 286 DMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFG 342
M P +TF S++ C+ L +G +Q IK G+ V + + MYS G
Sbjct: 189 HMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCG 248
Query: 343 KVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
+ A+ IF+ + RD V+WN MI + + E ++ + M G++P +FTY +L
Sbjct: 249 DLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
Query: 403 ASDSL---QVVEMVHS-LLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS 458
L + +++H+ ++ L + + N+L+ YC G + A +F + +L+S
Sbjct: 309 GCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVS 368
Query: 459 WNTIISGFLTNGCPLQGLEQFSALL--NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGY 516
WN+IISG NG Q + + LL +TP +P+ Y HGK +HG
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTP-RPDEYTFSAAISATAEPERFVHGKLLHGQ 427
Query: 517 ILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEA 576
+ + G+ + +G L++MY K + + VF+ M +RD + W +I +++ G + A
Sbjct: 428 VTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELA 487
Query: 577 VCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIV 636
V F M D + + V+ ACS + ++ G +F + GF + +V
Sbjct: 488 VQFFIEMYREKN-RSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALV 545
Query: 637 DLLGRSGYLEEAERLIKGGYFGANSNI-CW-SLFSACAAHGNLRLGRMVARLLLEKDHNN 694
D+ G++G E AE + +N ++ CW S+ A + HG + +LE
Sbjct: 546 DMYGKNGKYETAETIFS---LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMP 602
Query: 695 PSV-YVLLSNICAAAGQWEEAANLRDMMREFG 725
+V Y+ L C+ G + L + M+E G
Sbjct: 603 DAVTYLSLLAACSHRGSTLQGKFLWNQMKEQG 634
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 151/347 (43%), Gaps = 51/347 (14%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I + ++ N +++ + + +++ ++ ++ T RPD YT S AI+A+A
Sbjct: 361 IHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE---- 416
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G LH + G + V +LLS+Y K + S ++ F ++ D WT M+
Sbjct: 417 RFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIV 476
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+RLG+ A++ F +M N R DG
Sbjct: 477 GHSRLGNSELAVQFFIEMYREKN---------------------------------RSDG 503
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
++ +S++ CS + +L G H + IR+GF SV +L+ MY G A +F
Sbjct: 504 FSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFS- 562
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC----SSL 309
A D +N+M+ + E A F + + F P T++S++++C S+L
Sbjct: 563 -LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTL 621
Query: 310 R---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
+ + Q + Q IK GF Y+ + N + S G V+EA + E+
Sbjct: 622 QGKFLWNQMKEQGIKAGFKHYSCMVN----LVSKAGLVDEALELIEQ 664
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 180/623 (28%), Positives = 297/623 (47%), Gaps = 103/623 (16%)
Query: 215 VHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV-------------------- 254
VH VI+SG + ++N+L+ +Y G + A ++F E+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 255 ---------EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS 305
+ RD V++ MI G + + A + DM K P + T +V++S
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 306 CSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYS-C--------------------- 340
++ R G + + +K G +V+N+ + MY+ C
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 341 ---------FGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGI- 390
G+++ A FE+M ERD+V+WN MIS F Q + A+ + KM R +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 391 EPDEFTYGSLLGASDSLQ---VVEMVHSLLSKIGL------------------------- 422
PD FT S+L A +L+ + + +HS + G
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 423 ---------MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPL 473
+K+E +L+ Y + G +N A IF +L + +++W +I G+ +G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 474 QGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALV 533
+ + F +++ +PN+Y HGKQ+HG ++ G +S+ NAL+
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 534 TMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPD 592
TMYAK G++ + F+ + +RDT+SW ++I A AQHG +EA+ FE M + G+ PD
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM-LMEGLRPD 514
Query: 593 HATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI 652
H T+ V SAC+H GLV+ G + FDMM ++ +P++ H++C+VDL GR+G L+EA+ I
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 653 KGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWE 712
+ + SL SAC H N+ LG++ A LL + N Y L+N+ +A G+WE
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 713 EAANLRDMMREFGTTKQPGCSWI 735
EAA +R M++ K+ G SWI
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWI 657
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 149/569 (26%), Positives = 251/569 (44%), Gaps = 79/569 (13%)
Query: 78 FGNQL-HAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
F QL H I++GL ++ N+L+++Y+K + F E+ +SW T+LSA
Sbjct: 31 FTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAY 90
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADN-GHDDVAFDLFRDMQKIGVRPDGY 195
++ G + + FDQ+P R +V+ W +I G N G A + DM K G+ P +
Sbjct: 91 SKRGDMDSTCEFFDQLPQRDSVS-WTTMIV--GYKNIGQYHKAIRVMGDMVKEGIEPTQF 147
Query: 196 TFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF--- 251
T T++L S+ + ++ G+ VHS +++ G SV NSL+ MY CG + A VF
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 252 ------------------GEVEAGL--------RDHVTYNAMIDGLVRVDRNEDAFVMFR 285
G+++ + RD VT+N+MI G + + A +F
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 286 DM-QKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYS-C 340
M + + SP T SV+S+C++L +G Q + + TGFD V NA ++MYS C
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 341 --------------------------------FGKVNEAQNIFERMEERDLVSWNIMISM 368
G +N+A+NIF +++RD+V+W MI
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVG 387
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIG-LMK 424
+ Q AI + M G P+ +T ++L + SL + + +H K G +
Sbjct: 388 YEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS 447
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLP-YKSLISWNTIISGFLTNGCPLQGLEQFSALL 483
V V N+LI Y + G I A + F + + +SW ++I +G + LE F +L
Sbjct: 448 VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 484 NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISLGNALVTMYAKCGSL 542
L+P+ G+Q + +S +V ++ + G L
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 543 DGSLGVFNAM-VKRDTISWNALISAYAQH 570
+ M ++ D ++W +L+SA H
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 210/465 (45%), Gaps = 65/465 (13%)
Query: 52 LRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDL 111
+ P +TL+ + + A TR T G ++H+ ++ GL+ + V+NSLL++YAK D
Sbjct: 142 IEPTQFTLTNVLASVAATRCMET----GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 112 ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD 171
+ F + D SW M++ ++G + A+ F+QM R ++ WN++I+
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER-DIVTWNSMISGFN-Q 255
Query: 172 NGHDDVAFDLFRDMQKIG-VRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTS 229
G+D A D+F M + + PD +T S+LS C+ +E L G+ +HS ++ +GF
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315
Query: 230 VVNSLITMYFNCGCV-----------------------VDAYQVFGE--------VEAGL 258
V+N+LI+MY CG V +D Y G+ V
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 375
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQA 315
RD V + AMI G + +A +FR M P T +++S SSL G Q
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME-ERDLVSWNIMISMFFQENL 374
++K+G +V+NA +TMY+ G + A F+ + ERD VSW MI Q
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGAS-------------DSLQVVEMVHSLLSKIG 421
E A+ + M G+ PD TY + A D ++ V+ + LS
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 422 LMKVEVLNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNTIISG 465
M + + R G + A + +P + +++W +++S
Sbjct: 556 CM--------VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 173/366 (47%), Gaps = 25/366 (6%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
++ I+ N +++ + +L +F+++ L PD +TL++ ++A AN
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLC- 296
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPD--DYSWTTM 132
G Q+H+H + TG V N+L+S+Y++ + + R + D +T +
Sbjct: 297 ---IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
L +LG + A +F + +R +V W A+I + + A +LFR M G RP
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDR-DVVAWTAMIVGYEQHGSYGE-AINLFRSMVGGGQRP 411
Query: 193 DGYTFTSM-LSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
+ YT +M S+ L G+ +H ++SG + SV N+LITMY G + A + F
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV 311
+ RD V++ +MI L + E+A +F M P T+V V S+C+
Sbjct: 472 DLIRCE-RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT--HA 528
Query: 312 GCQAQAQSIKTGFDAYTAVNN--ATMTMYSC----FGK---VNEAQNIFERME-ERDLVS 361
G Q + FD V+ T++ Y+C FG+ + EAQ E+M E D+V+
Sbjct: 529 GLVNQGRQY---FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 362 WNIMIS 367
W ++S
Sbjct: 586 WGSLLS 591
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 137/321 (42%), Gaps = 37/321 (11%)
Query: 369 FFQENLNE-----TAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM 423
Q+++N+ TA L + ++ + G+ + +L+ L ++ L
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 424 KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALL 483
N++++AY + G ++ + F LP + +SW T+I G+ G + + ++
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 484 NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKC---- 539
++P + GK+VH +I++ G +S+ N+L+ MYAKC
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 540 ---------------------------GSLDGSLGVFNAMVKRDTISWNALISAYAQHGQ 572
G +D ++ F M +RD ++WN++IS + Q G
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGY 258
Query: 573 GKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHF 632
A+ F M + PD T VLSAC+++ + G +I +V GF S
Sbjct: 259 DLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT-GFDISGIVL 317
Query: 633 SCIVDLLGRSGYLEEAERLIK 653
+ ++ + R G +E A RLI+
Sbjct: 318 NALISMYSRCGGVETARRLIE 338
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 278/535 (51%), Gaps = 19/535 (3%)
Query: 215 VHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRV 274
+H I +GF + + + LI +Y G V A ++F + RD V++ AMI R
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISK--RDVVSWTAMISRFSRC 91
Query: 275 DRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNN-- 332
+ DA ++F++M + + T+ SV+ SC L GC + I + N
Sbjct: 92 GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDL--GCLKEGMQIHGSVEKGNCAGNLI 149
Query: 333 ---ATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
A +++Y+ GK+ EA+ F+ M+ERDLVSWN MI + +T+ + M G
Sbjct: 150 VRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEG 209
Query: 390 IEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGLMKVEVL-NSLIAAYCRNGRINWAL 445
+PD FT+GSLL AS L++V +H L K+G + L SL+ AY + G + A
Sbjct: 210 KKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAW 269
Query: 446 QIFSNLPYKSLISWNTIISGF-LTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXX 504
++ + L+S +I+GF N C + F ++ K +
Sbjct: 270 KLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTI 329
Query: 505 XXXXHGKQVHGYILRHG-FSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNAL 563
G+Q+HG+ L+ +++LGN+L+ MYAK G ++ ++ F M ++D SW +L
Sbjct: 330 ASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSL 389
Query: 564 ISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIY 623
I+ Y +HG ++A+ + M+ I+P+ TF +LSACSH G + G +I+D M+N +
Sbjct: 390 IAGYGRHGNFEKAIDLYNRME-HERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKH 448
Query: 624 GFVPSVDHFSCIVDLLGRSGYLEEAERLI--KGGYFGANSNICWSLFSACAAHGNLRLGR 681
G +H SCI+D+L RSGYLEEA LI K G +S+ + AC HGN++L +
Sbjct: 449 GIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSK 508
Query: 682 MVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGT-TKQPGCSWI 735
+ A LL + P Y+ L+++ AA G W+ A N R +M+E G+ K PG S +
Sbjct: 509 VAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 223/506 (44%), Gaps = 53/506 (10%)
Query: 82 LHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGH 141
+H ++I G ++ + + L+ LY K D+ + F I D SWT M+S +R G+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 142 VGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML 201
DAL L F++M + V+ + +T+ S+L
Sbjct: 94 HPDALLL---------------------------------FKEMHREDVKANQFTYGSVL 120
Query: 202 SLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRD 260
C + L G +H V + V ++L+++Y CG + +A F ++ RD
Sbjct: 121 KSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE--RD 178
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDM-----QKACFSPMEATFVSVMSSCSSLRVGCQA 315
V++NAMIDG + +F +F+ M + CF+ S++ C L + +
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKC--LEIVSEL 236
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE-NL 374
+IK GF +A+ + + Y G + A + E ++RDL+S +I+ F Q+ N
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 296
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGLMKVEVL--N 429
A + M R+ + DE S+L ++ V + +H K ++ +V N
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 356
Query: 430 SLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKP 489
SLI Y ++G I A+ F + K + SW ++I+G+ +G + ++ ++ + + +KP
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416
Query: 490 NAYXXXXXXXXXXXXXXXXHGKQVHGYIL-RHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
N G +++ ++ +HG + + ++ M A+ G L+ + +
Sbjct: 417 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 476
Query: 549 FNA---MVKRDTISWNALISAYAQHG 571
+ +V + +W A + A +HG
Sbjct: 477 IRSKEGIVSLSSSTWGAFLDACRRHG 502
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 227/497 (45%), Gaps = 63/497 (12%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
IS ++ +++ +R H ++L LF ++H ++ + +T + + + +
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDL----G 127
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G Q+H + + V ++LLSLYA
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYA---------------------------- 159
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
R G + +A FD M R V+ WNA+I A N D +F LF+ M G +PD
Sbjct: 160 ---RCGKMEEARLQFDSMKERDLVS-WNAMIDGYTA-NACADTSFSLFQLMLTEGKKPDC 214
Query: 195 YTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
+TF S+L + V+ L+ +H + I+ GF ++++ SL+ Y CG + +A+++
Sbjct: 215 FTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEG 274
Query: 254 VEAGLRDHVTYNAMIDGLVRVDR-NEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SL 309
+ RD ++ A+I G + + DAF +F+DM + E S++ C+ S+
Sbjct: 275 TKK--RDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 332
Query: 310 RVGCQAQAQSIKTG---FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMI 366
+G Q ++K+ FD A+ N+ + MY+ G++ +A FE M+E+D+ SW +I
Sbjct: 333 TIGRQIHGFALKSSQIRFD--VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLI 390
Query: 367 SMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM----VHSLLSKIGL 422
+ + + E AI Y +M I+P++ T+ SLL A E+ ++++K G+
Sbjct: 391 AGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 450
Query: 423 -MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSA 481
+ E L+ +I R+G + A + + + ++S ++ G + C G Q S
Sbjct: 451 EAREEHLSCIIDMLARSGYLEEAYALIRS--KEGIVSLSSSTWGAFLDACRRHGNVQLSK 508
Query: 482 LLNT------PLKPNAY 492
+ T P KP Y
Sbjct: 509 VAATQLLSMEPRKPVNY 525
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 286/533 (53%), Gaps = 15/533 (2%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV-TYNAMIDGL 271
+ +H+ ++ G ++ LI + G + A QVF ++ R + +NA+I G
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP---RPQIFPWNAIIRGY 94
Query: 272 VRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYT 328
R + +DA +M+ +MQ A SP TF ++ +CS L ++G AQ + GFDA
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 329 AVNNATMTMYSCFGKVNEAQNIFE--RMEERDLVSWNIMISMFFQENLNETAILTYLKMR 386
V N + +Y+ ++ A+ +FE + ER +VSW ++S + Q A+ + +MR
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 387 RVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRIN 442
++ ++PD S+L A LQ ++ +H+ + K+GL ++ ++L SL Y + G++
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 443 WALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXX 502
A +F + +LI WN +ISG+ NG + ++ F ++N ++P+
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334
Query: 503 XXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNA 562
+ ++ Y+ R + ++ + +AL+ M+AKCGS++G+ VF+ + RD + W+A
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 563 LISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNI 622
+I Y HG+ +EA+ + AM+ G+ P+ TF +L AC+H G+V +G F+ M +
Sbjct: 395 MIVGYGLHGRAREAISLYRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD- 452
Query: 623 YGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRM 682
+ P H++C++DLLGR+G+L++A +IK + +L SAC H ++ LG
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEY 512
Query: 683 VARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
A+ L D +N YV LSN+ AAA W+ A +R M+E G K GCSW+
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 200/450 (44%), Gaps = 11/450 (2%)
Query: 130 TTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG 189
T ++ AS+ G + A ++FD +P R + WNAII R + N H A ++ +MQ
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLP-RPQIFPWNAII-RGYSRNNHFQDALLMYSNMQLAR 114
Query: 190 VRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAY 248
V PD +TF +L CS + L GR VH+ V R GF A V N LI +Y C + A
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 249 QVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS- 307
VF + R V++ A++ + +A +F M+K P VSV+++ +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 308 --SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIM 365
L+ G A +K G + + + TMY+ G+V A+ +F++M+ +L+ WN M
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM-- 423
IS + + AI + +M + PD + S + A + +E S+ +G
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354
Query: 424 --KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSA 481
V + ++LI + + G + A +F + ++ W+ +I G+ +G + + + A
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRA 414
Query: 482 LLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGS 541
+ + PN G + H + + ++ + + G
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGH 474
Query: 542 LDGSLGVFNAM-VKRDTISWNALISAYAQH 570
LD + V M V+ W AL+SA +H
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 212/473 (44%), Gaps = 56/473 (11%)
Query: 6 FSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITA 65
F+RQ+ + QI N ++ +R+N ++L +++ + + + PD +T + A
Sbjct: 71 FARQV-FDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKA 128
Query: 66 SANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPD 125
+ + G +HA R G A V N L++LYAK L S F + P+
Sbjct: 129 CSGL----SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 126 D--YSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFR 183
SWT ++SA + G +AL++F Q
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQ-------------------------------- 212
Query: 184 DMQKIGVRPDGYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCG 242
M+K+ V+PD S+L + ++ L GR +H+ V++ G ++ SL TMY CG
Sbjct: 213 -MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCG 271
Query: 243 CVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSV 302
V A +F ++++ + + +NAMI G + +A MF +M P + S
Sbjct: 272 QVATAKILFDKMKSP--NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSA 329
Query: 303 MSSCSSLRVGCQAQAQSI-----KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER 357
+S+C+ +VG QA+S+ ++ + +++A + M++ G V A+ +F+R +R
Sbjct: 330 ISACA--QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLL 417
D+V W+ MI + AI Y M R G+ P++ T+ LL A + +V
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 418 SKIGLMKVEVLNS----LIAAYCRNGRINWALQIFSNLPYKSLIS-WNTIISG 465
+++ K+ +I R G ++ A ++ +P + ++ W ++S
Sbjct: 448 NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 207/747 (27%), Positives = 351/747 (46%), Gaps = 89/747 (11%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHV 97
E+++ F +H + +P T + + + G +H++ I+ GL+ + V
Sbjct: 104 ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYN----GKSMHSYIIKAGLEKDTLV 159
Query: 98 ANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSN 157
N+L+S+YAK F I +PD Y+ FD + ++ +
Sbjct: 160 GNALVSMYAK----------FGFI-FPDAYT-------------------AFDGIADK-D 188
Query: 158 VAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDF----GR 213
V WNAII +N D AF F M K P+ T ++L +C+ + GR
Sbjct: 189 VVSWNAIIAGFSENNMMAD-AFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGR 247
Query: 214 HVHSVVI-RSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
+HS V+ RS V NSL++ Y G + +A +F + G +D V++N +I G
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM--GSKDLVSWNVVIAGYA 305
Query: 273 RVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAY- 327
AF +F ++ K SP T +S++ C+ L G + + ++ +
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 328 TAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
T+V NA ++ Y+ FG + A F M +D++SWN ++ F + +
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 388 VGIEPDEFTYGSLLGASDSLQ---VVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGR 440
I D T SLL ++Q V+ VH K GL+ E + N+L+ AY + G
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN 485
Query: 441 INWALQIFSNL-PYKSLISWNTIISGFLTNG----------------------------- 470
+ +A +IF L ++L+S+N+++SG++ +G
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAE 545
Query: 471 --CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISL 528
CP + + F + ++PN +Q HGYI+R G +I L
Sbjct: 546 SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRL 604
Query: 529 GNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPG 588
L+ +YAKCGSL + VF + +RD + + A+++ YA HG+GKEA+ + M S
Sbjct: 605 KGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTES-N 663
Query: 589 IEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA 648
I+PDH T +L+AC H GL+ DG +I+D + ++G P+++ ++C VDL+ R G L++A
Sbjct: 664 IKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDA 723
Query: 649 ERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAA 708
+ N+NI +L AC + + LG VA LL+ + ++ +VL+SN+ AA
Sbjct: 724 YSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAAD 783
Query: 709 GQWEEAANLRDMMREFGTTKQPGCSWI 735
+WE LR++M++ K GCSW+
Sbjct: 784 AKWEGVMELRNLMKKKEMKKPAGCSWL 810
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 198/398 (49%), Gaps = 23/398 (5%)
Query: 189 GVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA 247
G D F ++ C SV L GR +H V + G +A + V S++ MY C + D
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 248 YQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC-FSPMEATFVSVMSSC 306
++F ++++ D V +N ++ GL V + F+ M A P TF V+ C
Sbjct: 76 QKMFRQMDS--LDPVVWNIVLTGL-SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 307 SSLRVGCQAQAQS-----IKTGFDAYTAVNNATMTMYSCFGKV-NEAQNIFERMEERDLV 360
+R+G +S IK G + T V NA ++MY+ FG + +A F+ + ++D+V
Sbjct: 133 --VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 361 SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL------QVVEMVH 414
SWN +I+ F + N+ A ++ M + EP+ T ++L S+ + +H
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 415 SLLSKIGLMKVEVL--NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCP 472
S + + ++ V NSL++ Y R GRI A +F+ + K L+SWN +I+G+ +N
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW 310
Query: 473 LQGLEQFSALLNT-PLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSE-ISLGN 530
+ + F L++ + P++ GK++H YILRH + E S+GN
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 531 ALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYA 568
AL++ YA+ G + F+ M +D ISWNA++ A+A
Sbjct: 371 ALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 155/550 (28%), Positives = 244/550 (44%), Gaps = 62/550 (11%)
Query: 55 DHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASV 114
DH + A A + + T G LH + G A S V+ S+L++YAK +
Sbjct: 20 DHRVFLDVVKACA----SVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM--- 72
Query: 115 ERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGH 174
D K+F QM + V VWN ++T G
Sbjct: 73 ----------------------------DDCQKMFRQMDSLDPV-VWNIVLTGLSVSCGR 103
Query: 175 DDVAFDLFRDMQKIG-VRPDGYTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVV 231
+ + F F+ M +P TF +L LC V L D G+ +HS +I++G T V
Sbjct: 104 ETMRF--FKAMHFADEPKPSSVTFAIVLPLC-VRLGDSYNGKSMHSYIIKAGLEKDTLVG 160
Query: 232 NSLITMYFNCGCVV-DAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
N+L++MY G + DAY F + +D V++NA+I G + DAF F M K
Sbjct: 161 NALVSMYAKFGFIFPDAYTAFDGIAD--KDVVSWNAIIAGFSENNMMADAFRSFCLMLKE 218
Query: 291 CFSPMEATFVSVMSSCSSL------RVGCQAQAQSI-KTGFDAYTAVNNATMTMYSCFGK 343
P AT +V+ C+S+ R G Q + + ++ + V N+ ++ Y G+
Sbjct: 219 PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGR 278
Query: 344 VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG-IEPDEFTYGSLLG 402
+ EA ++F RM +DLVSWN++I+ + A + + G + PD T S+L
Sbjct: 279 IEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILP 338
Query: 403 ASDSLQVV---EMVHSLLSKIG--LMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLI 457
L + + +HS + + L V N+LI+ Y R G + A FS + K +I
Sbjct: 339 VCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDII 398
Query: 458 SWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYI 517
SWN I+ F + Q L LLN + ++ K+VHGY
Sbjct: 399 SWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYS 458
Query: 518 LRHGF---SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDT-ISWNALISAYAQHGQG 573
++ G E LGNAL+ YAKCG+++ + +F + +R T +S+N+L+S Y G
Sbjct: 459 VKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSH 518
Query: 574 KEAVCCFEAM 583
+A F M
Sbjct: 519 DDAQMLFTEM 528
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 155/345 (44%), Gaps = 27/345 (7%)
Query: 283 MFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFG 342
+F D+ KAC S VS ++S +L GC K G A + V+ + + MY+
Sbjct: 23 VFLDVVKACAS------VSDLTSGRALH-GC-----VFKLGHIACSEVSKSVLNMYAKCR 70
Query: 343 KVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPD--EFTYGSL 400
++++ Q +F +M+ D V WNI+++ ET + + K EP T+ +
Sbjct: 71 RMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRET--MRFFKAMHFADEPKPSSVTFAIV 128
Query: 401 LGA----SDSLQVVEMVHSLLSKIGLMKVEVL-NSLIAAYCRNGRI-NWALQIFSNLPYK 454
L DS M HS + K GL K ++ N+L++ Y + G I A F + K
Sbjct: 129 LPLCVRLGDSYNGKSM-HSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADK 187
Query: 455 SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXX---XXXXXXXXXXHGK 511
++SWN II+GF N F +L P +PN G+
Sbjct: 188 DVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGR 247
Query: 512 QVHGYIL-RHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQH 570
Q+H Y++ R + + + N+LV+ Y + G ++ + +F M +D +SWN +I+ YA +
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 571 GQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
+ +A F + + PD T +L C+ + + G I
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEI 352
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/648 (28%), Positives = 321/648 (49%), Gaps = 16/648 (2%)
Query: 99 NSLLSLYAKAEDLASVERAFAEI---EYPDDYSWTTMLSAS-TRLGHVGDALKLFDQMPN 154
N+ L + ++ ++ + + A+I + +D S T L+ + LG + A +F +
Sbjct: 21 NTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV-Q 79
Query: 155 RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK-IGVRPDGYTFTSMLSLCSVELLD-FG 212
R +V ++N ++ R + N + +F ++K ++P+ T+ +S S D G
Sbjct: 80 RPDVFLFN-VLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
R +H + G + + ++++ MYF V DA +VF + +D + +N MI G
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE--KDTILWNTMISGYR 196
Query: 273 RVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYT 328
+ + ++ +FRD+ ++C T + ++ + + L R+G Q + + KTG ++
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 329 AVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRV 388
V +++YS GK+ +F + D+V++N MI + E ++ + ++
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 389 GIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQI 447
G T SL+ S L ++ +H K + V +L Y + I A ++
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKL 376
Query: 448 FSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXX 507
F P KSL SWN +ISG+ NG + F + + PN
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 508 XHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAY 567
GK VH + F S I + AL+ MYAKCGS+ + +F+ M K++ ++WN +IS Y
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGY 496
Query: 568 AQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVP 627
HGQG+EA+ F M ++ GI P TF VL ACSH GLV +G IF+ M++ YGF P
Sbjct: 497 GLHGQGQEALNIFYEM-LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP 555
Query: 628 SVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLL 687
SV H++C+VD+LGR+G+L+ A + I+ S++ +L AC H + L R V+ L
Sbjct: 556 SVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKL 615
Query: 688 LEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
E D +N +VLLSNI +A + +AA +R ++ K PG + I
Sbjct: 616 FELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 200/449 (44%), Gaps = 50/449 (11%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N +++ ++ + ES+++F + + R D TL + A A + G Q+H
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ----ELRLGMQIH 244
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+ A +TG +H +V +SLY+K + F E PD ++ M+ T
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYT------ 298
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
NG +++ LF+++ G R T S++ +
Sbjct: 299 ---------------------------SNGETELSLSLFKELMLSGARLRSSTLVSLVPV 331
Query: 204 CSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
+L + +H ++S FL+ SV +L T+Y + A ++F E+ + +
Sbjct: 332 SGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD--ESPEKSLPS 387
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSI 320
+NAMI G + EDA +FR+MQK+ FSP T ++S+C+ +L +G
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 321 KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAIL 380
T F++ V+ A + MY+ G + EA+ +F+ M +++ V+WN MIS + + A+
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALN 507
Query: 381 TYLKMRRVGIEPDEFTYGSLLGASDSLQVV----EMVHSLLSKIGLMK-VEVLNSLIAAY 435
+ +M GI P T+ +L A +V E+ +S++ + G V+ ++
Sbjct: 508 IFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567
Query: 436 CRNGRINWALQIFSNLPYKSLIS-WNTII 463
R G + ALQ + + S W T++
Sbjct: 568 GRAGHLQRALQFIEAMSIEPGSSVWETLL 596
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 264/516 (51%), Gaps = 14/516 (2%)
Query: 230 VVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK 289
+ +LI YF G V +A +F E+ RD V + AMI G + N A+ F +M K
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPD--RDVVAWTAMITGYASSNYNARAWECFHEMVK 104
Query: 290 ACFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATMTMY-SCFGKVN 345
SP E T SV+ SC +++V G +K G + V+NA M MY +C +
Sbjct: 105 QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 346 EAQNIFERMEERDLVSWNIMISMF--FQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
A IF ++ ++ V+W +I+ F + + + + + + P T A
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 404 S-DSLQVVEMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNT 461
S DS+ + +H+ + K G + V+NS++ YCR G ++ A F + K LI+WNT
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 462 IISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG 521
+IS L + L F + PN Y G+Q+HG I R G
Sbjct: 285 LISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 522 FSSEISLGNALVTMYAKCGSLDGSLGVFNAMV-KRDTISWNALISAYAQHGQGKEAVCCF 580
F+ + L NAL+ MYAKCG++ S VF +V +R+ +SW +++ Y HG G EAV F
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 581 EAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLG 640
+ M +S GI PD F VLSAC H GLV+ G + F++M + YG P D ++C+VDLLG
Sbjct: 404 DKM-VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 641 RSGYLEEAERLIKGGYFGANSNICWSLFSACAAHG-NLRLGRMVARLLLEKDHNNPSVYV 699
R+G + EA L++ F + + ++ AC AH N + R+ AR ++E YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 700 LLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+LS I AA G+W + A +R MMR G K+ G SWI
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 249/504 (49%), Gaps = 22/504 (4%)
Query: 130 TTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG 189
T ++ + G V +A LFD+MP+R +V W A+IT + N ++ A++ F +M K G
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDR-DVVAWTAMITGYASSN-YNARAWECFHEMVKQG 106
Query: 190 VRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAY 248
P+ +T +S+L C ++++L +G VH VV++ G V N+++ MY C ++A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 249 -QVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM--QKACFSPMEATF-VSVMS 304
+F +++ +++ VT+ +I G + M++ M + A +P T V +
Sbjct: 167 CLIFRDIK--VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 305 SCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
S S+ G Q A IK GF + V N+ + +Y G ++EA++ F ME++DL++WN
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIG 421
+IS + + +E A+L + + G P+ +T+ SL+ A ++ + + +H + + G
Sbjct: 285 LISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 422 LMK-VEVLNSLIAAYCRNGRINWALQIFSNL-PYKSLISWNTIISGFLTNGCPLQGLEQF 479
K VE+ N+LI Y + G I + ++F + ++L+SW +++ G+ ++G + +E F
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 480 SALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYIL-RHGFSSEISLGNALVTMYAK 538
++++ ++P+ G + + +G + + + N +V + +
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 539 CGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGK--EAVCCFEAMQISPGIEPDHAT 595
G + + + M K D +W A++ A H + + M++ P + +
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVM 523
Query: 596 FTIVLSACSHVGLVDDGTRIFDMM 619
+ + +A G D R+ MM
Sbjct: 524 LSYIYAA---EGKWVDFARVRKMM 544
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 213/444 (47%), Gaps = 55/444 (12%)
Query: 33 SNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLK 92
SN + + + F ++ T P+ +TLS+ + + N + A +G +H ++ G++
Sbjct: 89 SNYNARAWECFHEMVKQGT-SPNEFTLSSVLKSCRNMKVLA----YGALVHGVVVKLGME 143
Query: 93 AHSHVANSLLSLYAKAEDLASVERA---FAEIEYPDDYSWTTMLSASTRLGHVGDALKLF 149
+V N+++++YA ++E A F +I+ +D +WTT+++ T LG LK++
Sbjct: 144 GSLYVDNAMMNMYATCS--VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMY 201
Query: 150 DQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELL 209
QM N V IT I VR S++ +
Sbjct: 202 KQML-LENAEVTPYCIT---------------------IAVRASA----------SIDSV 229
Query: 210 DFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMID 269
G+ +H+ VI+ GF + V+NS++ +Y CG + +A F E+E +D +T+N +I
Sbjct: 230 TTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMED--KDLITWNTLIS 287
Query: 270 GLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDA 326
L R D +E A +MF+ + F P TF S++++C ++L G Q + + GF+
Sbjct: 288 ELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 327 YTAVNNATMTMYSCFGKVNEAQNIF-ERMEERDLVSWNIMISMFFQENLNETAILTYLKM 385
+ NA + MY+ G + ++Q +F E ++ R+LVSW M+ + A+ + KM
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 386 RRVGIEPDEFTYGSLLGASDSLQVVE----MVHSLLSKIGL-MKVEVLNSLIAAYCRNGR 440
GI PD + ++L A +VE + + S+ G+ ++ N ++ R G+
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 441 INWALQIFSNLPYKSLIS-WNTII 463
I A ++ +P+K S W I+
Sbjct: 467 IGEAYELVERMPFKPDESTWGAIL 490
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 178/425 (41%), Gaps = 102/425 (24%)
Query: 26 LLATLTRSNQHTESLKLFTQ-IHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHA 84
L+ T LK++ Q + + + P Y ++ A+ ASA+ + T G Q+HA
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTP--YCITIAVRASASI----DSVTTGKQIHA 237
Query: 85 HAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGD 144
I+ G +++ V NS+L LY + L+ + F E+E D +W T++S R
Sbjct: 238 SVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELER------ 291
Query: 145 ALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC 204
+D+ A +F+ + G P+ YTFTS+++ C
Sbjct: 292 -------------------------SDSSE---ALLMFQRFESQGFVPNCYTFTSLVAAC 323
Query: 205 S-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
+ + L+ G+ +H + R GF + N+LI MY CG + D+ +VFGE+ R+ V+
Sbjct: 324 ANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEI-VDRRNLVS 382
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTG 323
+ +M+ G +A +F M + P F++V+S+C A ++ G
Sbjct: 383 WTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACR--------HAGLVEKG 434
Query: 324 FDAYTAVN-----NATMTMYSCF-------GKVNEAQNIFERMEERDLVSWNIMISMFFQ 371
+ + N +Y+C GK+ EA + ERM
Sbjct: 435 LKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP---------------- 478
Query: 372 ENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKV-EVLNS 430
+PDE T+G++LGA + + + L+S++ KV E+
Sbjct: 479 ------------------FKPDESTWGAILGACKAHK----HNGLISRLAARKVMELKPK 516
Query: 431 LIAAY 435
++ Y
Sbjct: 517 MVGTY 521
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 285/568 (50%), Gaps = 49/568 (8%)
Query: 212 GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGL 271
+ +H+ IR+ L+ TS + +I++Y N + +A +F +++ + + ++I
Sbjct: 24 AKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSP--PVLAWKSVIRCF 80
Query: 272 VRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYT 328
A F +M+ + P F SV+ SC+ LR G ++ G D
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 329 AVNNATMTMY----------------------------------SC---FGKVNEAQNIF 351
NA M MY +C FG ++ + +F
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVF 199
Query: 352 ERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA-SDSLQVV 410
E M +D+VS+N +I+ + Q + E A+ +M ++PD FT S+L S+ + V+
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259
Query: 411 E--MVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFL 467
+ +H + + G+ V + +SL+ Y ++ RI + ++FS L + ISWN++++G++
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 468 TNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEIS 527
NG + L F ++ +KP A GKQ+HGY+LR GF S I
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 528 LGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISP 587
+ +ALV MY+KCG++ + +F+ M D +SW A+I +A HG G EAV FE M+
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK-RQ 438
Query: 588 GIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEE 647
G++P+ F VL+ACSHVGLVD+ F+ M +YG ++H++ + DLLGR+G LEE
Sbjct: 439 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 498
Query: 648 AERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAA 707
A I ++ +L S+C+ H NL L VA + D N YVL+ N+ A+
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558
Query: 708 AGQWEEAANLRDMMREFGTTKQPGCSWI 735
G+W+E A LR MR+ G K+P CSWI
Sbjct: 559 NGRWKEMAKLRLRMRKKGLRKKPACSWI 586
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 219/471 (46%), Gaps = 34/471 (7%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAA 73
T+ S +L ++ T + +++L F ++ +S PDH + + +
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCT----MM 118
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLAS---VERAFAEIEYPDDYSWT 130
FG +H +R G+ + N+L+++YAK + S V F E+ S
Sbjct: 119 MDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGD 178
Query: 131 TMLSASTRLGHVG--DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI 188
+ A T + G ++F+ MP R +V +N II ++D A + R+M
Sbjct: 179 EDVKAETCIMPFGIDSVRRVFEVMP-RKDVVSYNTIIAGYAQSGMYED-ALRMVREMGTT 236
Query: 189 GVRPDGYTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
++PD +T +S+L + S E +D G+ +H VIR G + + +SL+ MY + D
Sbjct: 237 DLKPDSFTLSSVLPIFS-EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED 295
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC 306
+ +VF + RD +++N+++ G V+ R +A +FR M A P F SV+ +C
Sbjct: 296 SERVFSRLYC--RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC 353
Query: 307 S---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
+ +L +G Q ++ GF + + +A + MYS G + A+ IF+RM D VSW
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWT 413
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM 423
+I A+ + +M+R G++P++ + ++L A + +V+ + +
Sbjct: 414 AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFN--SMT 471
Query: 424 KVEVLNSLIAAYC-------RNGRINWALQIFSNL---PYKSLISWNTIIS 464
KV LN + Y R G++ A S + P S+ W+T++S
Sbjct: 472 KVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV--WSTLLS 520
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 120/573 (20%), Positives = 219/573 (38%), Gaps = 120/573 (20%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
QLHA IRT +H+ A+ ++S+Y + L F ++ P +W +++
Sbjct: 24 AKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVI----- 77
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
RC D A F +M+ G PD F
Sbjct: 78 ----------------------------RCFTDQSLFSKALASFVEMRASGRCPDHNVFP 109
Query: 199 SMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMY---FNCGCVVDAYQVFGEV 254
S+L C++ + L FG VH ++R G N+L+ MY G + VF E+
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169
Query: 255 EA-------------------GL------------RDHVTYNAMIDGLVRVDRNEDAFVM 283
G+ +D V+YN +I G + EDA M
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM 229
Query: 284 FRDMQKACFSPMEATFVSVM---SSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSC 340
R+M P T SV+ S + G + I+ G D+ + ++ + MY+
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 289
Query: 341 FGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSL 400
++ +++ +F R+ RD +SWN +++ + Q A+ + +M ++P + S+
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349
Query: 401 LGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL 456
+ A L + + +H + + G + + ++L+ Y + G I A +IF +
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 457 ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGY 516
+SW II G +G + + F + +KPN
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFV--------------------- 448
Query: 517 ILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK-----RDTISWNALISAYAQHG 571
A++T + G +D + G FN+M K ++ + A+ + G
Sbjct: 449 --------------AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 572 QGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+ +EA M +EP + ++ +LS+CS
Sbjct: 495 KLEEAYNFISKM----CVEPTGSVWSTLLSSCS 523
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 179/607 (29%), Positives = 307/607 (50%), Gaps = 19/607 (3%)
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGV---RPD 193
++ G + DA +FD+MP+R +V W AII+ NG + M G +P+
Sbjct: 172 SKCGFLQDACLVFDEMPDR-DVVAWTAIISG-HVQNGESEGGLGYLCKMHSAGSDVDKPN 229
Query: 194 GYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
T CS + L GR +H +++G + V +S+ + Y G +AY F
Sbjct: 230 PRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFR 289
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVG 312
E+ G D ++ ++I L R E++F MF +MQ P +++ + +
Sbjct: 290 EL--GDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLV 347
Query: 313 CQAQAQS---IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM-EERDLVSWNIMISM 368
Q +A I+ F + V N+ ++MY F ++ A+ +F R+ EE + +WN M+
Sbjct: 348 PQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKG 407
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGL-MK 424
+ + + I + K++ +GIE D + S++ + + V + +H + K L +
Sbjct: 408 YGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLT 467
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
+ V+NSLI Y + G + A ++F ++I+WN +I+ ++ + + F +++
Sbjct: 468 ISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVS 526
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
KP++ G+ +H YI +SL AL+ MYAKCG L+
Sbjct: 527 ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEK 586
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
S +F+A ++D + WN +IS Y HG + A+ F+ M+ S ++P TF +LSAC+
Sbjct: 587 SRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESD-VKPTGPTFLALLSACT 645
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNIC 664
H GLV+ G ++F + ++ Y P++ H+SC+VDLL RSG LEEAE + F + I
Sbjct: 646 HAGLVEQGKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIW 704
Query: 665 WSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREF 724
+L S+C HG +G +A + D N Y++L+N+ +AAG+WEEA R+MMRE
Sbjct: 705 GTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRES 764
Query: 725 GTTKQPG 731
G K+ G
Sbjct: 765 GVGKRAG 771
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/593 (22%), Positives = 262/593 (44%), Gaps = 56/593 (9%)
Query: 40 LKLFTQIHS--SHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHV 97
L ++HS S +P+ TL A +N A G LH A++ GL + V
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNL----GALKEGRCLHGFAVKNGLASSKFV 267
Query: 98 ANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSN 157
+S+ S Y+K+ + + +F E+ D +SWT+++++ R G + +
Sbjct: 268 QSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE------------- 314
Query: 158 VAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVH 216
+FD+F +MQ G+ PDG + +++ L + L+ G+ H
Sbjct: 315 --------------------SFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFH 354
Query: 217 SVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV-EAGLRDHVTYNAMIDGLVRVD 275
VIR F ++V NSL++MY + A ++F + E G ++ +N M+ G ++
Sbjct: 355 GFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKE--AWNTMLKGYGKMK 412
Query: 276 RNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNN 332
+ +FR +Q A+ SV+SSCS ++ +G +KT D +V N
Sbjct: 413 CHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVN 472
Query: 333 ATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEP 392
+ + +Y G + A +F + ++++WN MI+ + +E AI + +M +P
Sbjct: 473 SLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKP 531
Query: 393 DEFTYGSLLGA---SDSLQVVEMVHSLLSKIG-LMKVEVLNSLIAAYCRNGRINWALQIF 448
T +LL A + SL+ +M+H +++ M + + +LI Y + G + + ++F
Sbjct: 532 SSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF 591
Query: 449 SNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXX 508
K + WN +ISG+ +G + F + + +KP
Sbjct: 592 DAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVE 651
Query: 509 HGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAY 567
GK++ + ++ + + LV + ++ G+L+ + +M D + W L+S+
Sbjct: 652 QGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC 711
Query: 568 AQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC-SHVGLVDDGTRIFDMM 619
HG+ + + E S +P + + I+L+ S G ++ R +MM
Sbjct: 712 MTHGEFEMGIRMAERAVAS---DPQNDGYYIMLANMYSAAGKWEEAERAREMM 761
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 143/567 (25%), Positives = 244/567 (43%), Gaps = 57/567 (10%)
Query: 203 LCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH 261
LC L L+ R ++++I G V + LI+ Y + G + +VF V RD
Sbjct: 33 LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTR--RDI 90
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQ 318
+N++I + F M + SP T V+S+C+ L VG
Sbjct: 91 FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150
Query: 319 SIK-TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
+K GFD TAV + + YS G + +A +F+ M +RD+V+W +IS Q +E
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEG 210
Query: 378 AILTYLKMRRVGIEPDE---------FTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE-V 427
+ KM G + D+ F S LGA L+ +H K GL + V
Sbjct: 211 GLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGA---LKEGRCLHGFAVKNGLASSKFV 267
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
+S+ + Y ++G + A F L + + SW +II+ +G + + F + N +
Sbjct: 268 QSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM 327
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
P+ GK HG+++RH FS + ++ N+L++MY K L +
Sbjct: 328 HPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEK 387
Query: 548 VFNAMVKR-DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
+F + + + +WN ++ Y + + + F +Q + GIE D A+ T V+S+CSH+
Sbjct: 388 LFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQ-NLGIEIDSASATSVISSCSHI 446
Query: 607 GLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYL--------------------- 645
G V G + +V ++ + ++DL G+ G L
Sbjct: 447 GAVLLGKSLHCYVVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMI 505
Query: 646 ------EEAERLIK------GGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHN 693
E++E+ I F +S +L AC G+L G+M+ R + E +H
Sbjct: 506 ASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHE 565
Query: 694 -NPSVYVLLSNICAAAGQWEEAANLRD 719
N S+ L ++ A G E++ L D
Sbjct: 566 MNLSLSAALIDMYAKCGHLEKSRELFD 592
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 273 bits (698), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 202/692 (29%), Positives = 328/692 (47%), Gaps = 49/692 (7%)
Query: 51 TLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAED 110
+L P+H+T+S + A+ + + Q+ H ++GL +V SLL+LY K
Sbjct: 43 SLTPNHFTMSIFLQATTTSFNSFKLQV--EQVQTHLTKSGLDRFVYVKTSLLNLYLKK-- 98
Query: 111 LASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCG- 169
G V A LFD+MP R V VWNA+I CG
Sbjct: 99 -----------------------------GCVTSAQMLFDEMPERDTV-VWNALI--CGY 126
Query: 170 ADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLART 228
+ NG++ A+ LF M + G P T ++L C + GR VH V +SG +
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 229 SVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQ 288
V N+LI+ Y C + A +F E++ + V++N MI + E+A +F++M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKD--KSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 289 KACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQ 348
+ T ++++S+ S +K G +V + + YS G + A+
Sbjct: 245 EKNVEISPVTIINLLSAHVSHE---PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 349 NIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTY-GSLLGASDS- 406
++ ++ +V ++S + ++ + A++ + K R++ ++ D G L G S
Sbjct: 302 RLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS 361
Query: 407 -LQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIIS 464
+ + +H K GL K V+N LI Y + + L +F L LISWN++IS
Sbjct: 362 HIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 421
Query: 465 GFLTNGCPLQGLEQF-SALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFS 523
G + +G E F +L L P+A GK++HGY LR+ F
Sbjct: 422 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 481
Query: 524 SEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAM 583
+E + AL+ MYAKCG+ + VF ++ T +WN++IS Y+ G A+ C+ M
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 541
Query: 584 QISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSG 643
+ G++PD TF VLSAC+H G VD+G F M+ +G P++ H++ +V LLGR+
Sbjct: 542 R-EKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRAC 600
Query: 644 YLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSN 703
EA LI +S + +L SAC H L +G VAR + D+ N +YVL+SN
Sbjct: 601 LFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSN 660
Query: 704 ICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ A W++ +R+MM++ G G S I
Sbjct: 661 LYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 134/303 (44%), Gaps = 18/303 (5%)
Query: 357 RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS------LQVV 410
RDL ++ ++ ++ + I + + R + P+ FT L A+ + LQ V
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQ-V 69
Query: 411 EMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
E V + L+K GL + V V SL+ Y + G + A +F +P + + WN +I G+ N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG 529
G + F +L P+A G+ VHG + G + +
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
NAL++ Y+KC L + +F M + T+SWN +I AY+Q G +EA+ F+ M +
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM-FEKNV 248
Query: 590 EPDHATFTIVLSA-CSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA 648
E T +LSA SH L +V G V + + +V R G L A
Sbjct: 249 EISPVTIINLLSAHVSHEPL--------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSA 300
Query: 649 ERL 651
ERL
Sbjct: 301 ERL 303
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 193/657 (29%), Positives = 310/657 (47%), Gaps = 83/657 (12%)
Query: 126 DYSWTTMLSAST----RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDL 181
D S T ++SAS R +G A KLFD+MP R ++A WN I+ +G+ + A +L
Sbjct: 19 DNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLA-WNEIVM-VNLRSGNWEKAVEL 76
Query: 182 FRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMY-- 238
FR+MQ G + T +L +CS E GR +H V+R G + S+ NSLI MY
Sbjct: 77 FREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSR 136
Query: 239 ----------FNC-------------------GCVVDAYQVFGEVE-AGLR-DHVTYNAM 267
FN G V DA + E+E GL+ D VT+N++
Sbjct: 137 NGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSL 196
Query: 268 IDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTG- 323
+ G ++DA + + MQ A P ++ S++ + + L++G ++
Sbjct: 197 LSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL 256
Query: 324 -FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTY 382
+D Y V + MY G + A+ +F+ M+ +++V+WN ++S L + A
Sbjct: 257 WYDVY--VETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALM 314
Query: 383 LKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRIN 442
++M + GI+PD T+ NSL + Y G+
Sbjct: 315 IRMEKEGIKPDAITW-------------------------------NSLASGYATLGKPE 343
Query: 443 WALQIFSNLPYK----SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXX 498
AL + + K +++SW I SG NG L+ F + + PNA
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Query: 499 XXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTI 558
GK+VHG+ LR + + ALV MY K G L ++ +F + +
Sbjct: 404 KILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA 463
Query: 559 SWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDM 618
SWN ++ YA G+G+E + F M + G+EPD TFT VLS C + GLV +G + FD+
Sbjct: 464 SWNCMLMGYAMFGRGEEGIAAFSVM-LEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDL 522
Query: 619 MVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLR 678
M + YG +P+++H SC+VDLLGRSGYL+EA I+ ++ I + S+C H +L
Sbjct: 523 MRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLE 582
Query: 679 LGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
L + + L + +N + Y+++ N+ + +WE+ +R++MR Q SWI
Sbjct: 583 LAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWI 639
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 144/616 (23%), Positives = 278/616 (45%), Gaps = 58/616 (9%)
Query: 21 LKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGN 80
L N ++ RS ++++LF ++ S D T+ + +N A G
Sbjct: 55 LAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKEGFAE----GR 109
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
Q+H + +R GL+++ + NSL+ +Y++ L + F ++ + SW ++LS+ T+LG
Sbjct: 110 QIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLG 169
Query: 141 HVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
+V DA+ L D+M + ++ WN++++ A G A + + MQ G++P +
Sbjct: 170 YVDDAIGLLDEMEICGLKPDIVTWNSLLSGY-ASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 198 TSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
+S+L ++ L G+ +H ++R+ V +LI MY G + A VF ++A
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQ 316
++ V +N+++ GL +DA + M+K P T+ S+ S
Sbjct: 289 --KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASG----------- 335
Query: 317 AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQE 372
Y+ GK +A ++ +M+E+ ++VSW + S +
Sbjct: 336 ---------------------YATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKN 374
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSL---LGASDSLQVVEMVHSL-LSKIGLMKVEVL 428
A+ ++KM+ G+ P+ T +L LG L + VH L K + V
Sbjct: 375 GNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA 434
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
+L+ Y ++G + A++IF + KSL SWN ++ G+ G +G+ FS +L ++
Sbjct: 435 TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGME 494
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYIL-RHGFSSEISLGNALVTMYAKCGSLDGSLG 547
P+A G + + R+G I + +V + + G LD +
Sbjct: 495 PDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWD 554
Query: 548 VFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEP-DHATFTIVLSACSH 605
M +K D W A +S+ H + A ++ +Q+ +EP + A + ++++ S+
Sbjct: 555 FIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQV---LEPHNSANYMMMINLYSN 611
Query: 606 VGLVDDGTRIFDMMVN 621
+ +D RI ++M N
Sbjct: 612 LNRWEDVERIRNLMRN 627
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 4/236 (1%)
Query: 413 VHSLLSKIGL--MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNG 470
+H L K GL V+++ + Y R + +A ++F +P + ++WN I+ L +G
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 471 CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN 530
+ +E F + + K G+Q+HGY+LR G S +S+ N
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 531 ALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIE 590
+L+ MY++ G L+ S VFN+M R+ SWN+++S+Y + G +A+ + M+I G++
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC-GLK 187
Query: 591 PDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLE 646
PD T+ +LS + GL D + M I G PS S ++ + G+L+
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHLK 242
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 267/542 (49%), Gaps = 20/542 (3%)
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD---AYQVFGEVEAGLRDHVTYNAMIDG 270
+H ++I+S + ++ LI C ++ A VF ++ +N+MI G
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC--PSVYIWNSMIRG 81
Query: 271 LVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAY 327
+ A + +++M + +SP TF V+ +CS LR G +KTGF+
Sbjct: 82 YSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVN 141
Query: 328 TAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
V+ + MY C G+VN +FE + + ++V+W +IS F N AI + +M+
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS 201
Query: 388 VGIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIGL---------MKVEVLNSLIAAY 435
G++ +E LL G + + H L +G V + SLI Y
Sbjct: 202 NGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMY 261
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
+ G + A +F +P ++L+SWN+II+G+ NG + L F +L+ + P+
Sbjct: 262 AKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFL 321
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
G+ +H Y+ + GF + ++ ALV MYAK G + + F + K+
Sbjct: 322 SVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
DTI+W +I A HG G EA+ F+ MQ PD T+ VL ACSH+GLV++G R
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 616 FDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHG 675
F M +++G P+V+H+ C+VD+L R+G EEAERL+K N NI +L + C H
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501
Query: 676 NLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
NL L + ++ E + +YVLLSNI A AG+W + +R+ M+ K G S +
Sbjct: 502 NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Query: 736 GT 737
T
Sbjct: 562 ET 563
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 173/354 (48%), Gaps = 28/354 (7%)
Query: 157 NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHV 215
+V +WN++I R +++ + D A +++M + G PD +TF +L CS + + FG V
Sbjct: 71 SVYIWNSMI-RGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 216 HSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVD 275
H V+++GF V L+ MY CG V +VF ++ + V + ++I G V +
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW--NVVAWGSLISGFVNNN 187
Query: 276 RNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR--------------VGCQAQAQSIK 321
R DA FR+MQ E V ++ +C + +G QS K
Sbjct: 188 RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQS-K 246
Query: 322 TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILT 381
GF+ A + + MY+ G + A+ +F+ M ER LVSWN +I+ + Q E A+
Sbjct: 247 VGFNVILA--TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCM 304
Query: 382 YLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCR 437
+L M +GI PD+ T+ S++ AS Q+ + +H+ +SK G +K ++ +L+ Y +
Sbjct: 305 FLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAK 364
Query: 438 NGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
G A + F +L K I+W +I G ++G G E S K NA
Sbjct: 365 TGDAESAKKAFEDLEKKDTIAWTVVIIGLASHG---HGNEALSIFQRMQEKGNA 415
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 201/481 (41%), Gaps = 66/481 (13%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAA 73
+I + N ++ + S ++L +F Q PD++T + A + R
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKAL-IFYQEMLRKGYSPDYFTFPYVLKACSGLRD-- 122
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
FG+ +H ++TG + + +V+ LL +Y
Sbjct: 123 --IQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCC------------------------- 155
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
G V L++F+ +P + NV W ++I+ +N D A + FR+MQ GV+ +
Sbjct: 156 ------GEVNYGLRVFEDIP-QWNVVAWGSLISGFVNNNRFSD-AIEAFREMQSNGVKAN 207
Query: 194 GYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLA--------RTSVVNSLITMYFNCGCV 244
+L C + + G+ H + GF + SLI MY CG +
Sbjct: 208 ETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDL 267
Query: 245 VDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
A +F + R V++N++I G + E+A MF DM +P + TF+SV+
Sbjct: 268 RTARYLFDGMPE--RTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR 325
Query: 305 SCSSLRVGCQAQAQSI-----KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL 359
+S+ GC QSI KTGF A+ A + MY+ G A+ FE +E++D
Sbjct: 326 --ASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDT 383
Query: 360 VSWNIMISMFFQENLNETAILTYLKMRRVG-IEPDEFTYGSLLGASDSLQVVEMVHSLLS 418
++W ++I A+ + +M+ G PD TY +L A + +VE +
Sbjct: 384 IAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFA 443
Query: 419 KI----GLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPL 473
++ GL VE ++ R GR A ++ +P K N I G L NGC +
Sbjct: 444 EMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP----NVNIWGALLNGCDI 499
Query: 474 Q 474
Sbjct: 500 H 500
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 211/735 (28%), Positives = 329/735 (44%), Gaps = 102/735 (13%)
Query: 82 LHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGH 141
LH AI TGL S + N+L++LYAK E+L+S E F +E+ D SW T+++ GH
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 142 VGDALKLFDQMPN----------------------------------------RSNVAVW 161
+L+ F M ++V+V
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 162 NAIIT---RCG---------------------------ADNGHDDVAFDLFRDMQKIG-V 190
N+II+ +CG A NG + AF + MQ + +
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 191 RPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLART-SVVNSLITMYFNCGCVVDAY 248
+PD T S+ S+C + GR VH +R +R V+NS+I MY CG A
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 249 QVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM--QKACFSPMEATFVSVMSSC 306
+F RD V++N+MI + A +F+++ + +C +T +++++SC
Sbjct: 450 LLFKTTTH--RDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Query: 307 SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE-RDLVSWNIM 365
S + S+ G + + G + A E M E RDL SWN +
Sbjct: 508 DS--------SDSLIFGKSVHCWLQK--------LGDLTSAFLRLETMSETRDLTSWNSV 551
Query: 366 ISMFFQENLNETAILTYLKMRRVG-IEPDEFTYGSLLGASDSLQVV---EMVHSL-LSKI 420
IS + ++ + M R G I D T + AS +L +V H L + +
Sbjct: 552 ISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSL 611
Query: 421 GLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFS 480
+ ++ N+LI Y R I A+++F + +L SWN +IS N G E F
Sbjct: 612 RELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA---GREVFQ 668
Query: 481 ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
N L+PN +G Q H +++R GF + + ALV MY+ CG
Sbjct: 669 LFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCG 728
Query: 541 SLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
L+ + VF +WN++ISA+ HG G++A+ F+ + + +EP+ ++F +L
Sbjct: 729 MLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLL 788
Query: 601 SACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGAN 660
SACSH G +D+G + M +G P +H IVD+LGR+G L EA I G
Sbjct: 789 SACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQK 848
Query: 661 SNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDM 720
+ + +L SAC HG+ +LG+ VA +L E + +N S Y+ L+N G WEEA LR M
Sbjct: 849 AGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKM 908
Query: 721 MREFGTTKQPGCSWI 735
+ + K PG S I
Sbjct: 909 VEDNALKKLPGYSVI 923
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 188/382 (49%), Gaps = 18/382 (4%)
Query: 278 EDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTM 337
E +F+ RD+ + +F+ + + V C A +K G A ++ +T
Sbjct: 84 ESSFMFLRDVLR--------SFMMRTETETPRSVHCFA----LKCGLLQDLATSSKLLTF 131
Query: 338 YSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTY 397
Y G++ + +F+ ++E+D++ WN MI+ Q A+ +++M G E D T
Sbjct: 132 YGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTL 191
Query: 398 GSLLGASDSL---QVVEMVHSLLSKIGLMKVEVL-NSLIAAYCRNGRINWALQIFSNLPY 453
A SL + M+H L + GL+ L N+L+ Y + ++ A +F+++ +
Sbjct: 192 LLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEH 251
Query: 454 KSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQV 513
+ ++SWNTI++ L NG P + L+ F ++ + + + G+ +
Sbjct: 252 RDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESL 311
Query: 514 HGYILRHGFSSE--ISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHG 571
HG +++ G+S E +S+GN++++MY+KCG + + VF +V RD IS NA+++ +A +G
Sbjct: 312 HGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANG 371
Query: 572 QGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDH 631
+EA MQ I+PD AT + S C + +G + V + +++
Sbjct: 372 MFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEV 431
Query: 632 FSCIVDLLGRSGYLEEAERLIK 653
+ ++D+ G+ G +AE L K
Sbjct: 432 INSVIDMYGKCGLTTQAELLFK 453
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 210/502 (41%), Gaps = 61/502 (12%)
Query: 95 SHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDAL-------- 146
S ++ L LY + S+ + + P Y S H ++
Sbjct: 9 STISPKSLRLYCSGHIIDSLRHSISRWNSPSGYCSNYYFSKRKHKRHFTSSVLSPVTPIV 68
Query: 147 -KLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRD-MQKIGVRPDGYTFTSMLSLC 204
LFD++P R N + + +F RD ++ +R + T
Sbjct: 69 HNLFDELPERENRTM---------------ESSFMFLRDVLRSFMMRTETET-------- 105
Query: 205 SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTY 264
R VH ++ G L + + L+T Y G +V + +F E++ +D + +
Sbjct: 106 -------PRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKE--KDVIVW 156
Query: 265 NAMIDGLVRVDRNEDAFVMFRDM--QKACFSPMEATFVSVMSSCSSLRVGCQA-QAQSIK 321
N+MI L + R A +F +M + F + S L C +I+
Sbjct: 157 NSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIE 216
Query: 322 TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILT 381
TG +++ NA M +Y+ ++ A+ +F ME RD+VSWN +++ ++
Sbjct: 217 TGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQY 276
Query: 382 YLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGL---MKVEVLNSLIAAY 435
+ M G E D T+ ++ A S++ + E +H L+ K G V V NS+I+ Y
Sbjct: 277 FKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMY 336
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNT-----PLKPN 490
+ G A +F L + +IS N I++GF NG E+ +LN ++P+
Sbjct: 337 SKCGDTEAAETVFEELVCRDVISSNAILNGFAANGM----FEEAFGILNQMQSVDKIQPD 392
Query: 491 AYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSE-ISLGNALVTMYAKCGSLDGSLGVF 549
G+ VHGY +R S + + N+++ MY KCG + +F
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 550 NAMVKRDTISWNALISAYAQHG 571
RD +SWN++ISA++Q+G
Sbjct: 453 KTTTHRDLVSWNSMISAFSQNG 474
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 196/721 (27%), Positives = 337/721 (46%), Gaps = 55/721 (7%)
Query: 23 LNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQL 82
+NHL + H + L F+ + ++ L PD +T + + A A+ + +FG +
Sbjct: 18 INHL----SSHGDHKQVLSTFSSMLANKLL-PDTFTFPSLLKACASLQ----RLSFGLSI 68
Query: 83 HAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHV 142
H + G + ++++SL++LYAK G +
Sbjct: 69 HQQVLVNGFSSDFYISSSLVNLYAK-------------------------------FGLL 97
Query: 143 GDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS 202
A K+F++M R +V W A+I C + G A L +M+ G++P T MLS
Sbjct: 98 AHARKVFEEMRER-DVVHWTAMIG-CYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS 155
Query: 203 LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
V + + +H + GF +V+NS++ +Y C V DA +F ++E RD V
Sbjct: 156 --GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ--RDMV 211
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATF---VSVMSSCSSLRVGCQAQAQS 319
++N MI G V + + M+ P + TF +SV + L +G Q
Sbjct: 212 SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQI 271
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
+KTGFD + A +TMY GK + + E + +D+V W +MIS + E A+
Sbjct: 272 VKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKAL 331
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAY 435
+ + +M + G + S++ + L ++ VH + + G + LNSLI Y
Sbjct: 332 IVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMY 391
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL-LNTPLKPNAYXX 494
+ G ++ +L IF + + L+SWN IISG+ N + L F + T + +++
Sbjct: 392 AKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTV 451
Query: 495 XXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK 554
GK +H ++R + ALV MY+KCG L+ + F+++
Sbjct: 452 VSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISW 511
Query: 555 RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTR 614
+D +SW LI+ Y HG+G A+ + + G+EP+H F VLS+CSH G+V G +
Sbjct: 512 KDVVSWGILIAGYGFHGKGDIALEIYSEF-LHSGMEPNHVIFLAVLSSCSHNGMVQQGLK 570
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAH 674
IF MV +G P+ +H +C+VDLL R+ +E+A + K + + ++ + AC A+
Sbjct: 571 IFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRAN 630
Query: 675 GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
G + ++ ++E + YV L + AA +W++ + + MR G K PG S
Sbjct: 631 GKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSK 690
Query: 735 I 735
I
Sbjct: 691 I 691
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 165/577 (28%), Positives = 281/577 (48%), Gaps = 20/577 (3%)
Query: 161 WNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVV 219
+N+ I + H V F M + PD +TF S+L C S++ L FG +H V
Sbjct: 14 FNSHINHLSSHGDHKQV-LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 220 IRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNED 279
+ +GF + + +SL+ +Y G + A +VF E+ RD V + AMI R +
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRE--RDVVHWTAMIGCYSRAGIVGE 130
Query: 280 AFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYS 339
A + +M+ P T + ++S + ++ GFD AV N+ + +Y
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 340 CFGKVNEAQNIFERMEERDLVSWNIMISMFFQ-ENLNETAILTYLKMRRVGIEPDEFTYG 398
V +A+++F++ME+RD+VSWN MIS + N++E L Y +MR G+ PD+ T+G
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLY-RMRGDGLRPDQQTFG 249
Query: 399 SLLGASDS---LQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYK 454
+ L S + L++ M+H + K G + + + +LI Y + G+ + ++ +P K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 455 SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVH 514
++ W +ISG + G + L FS +L + ++ G VH
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 515 GYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGK 574
GY+LRHG++ + N+L+TMYAKCG LD SL +F M +RD +SWNA+IS YAQ+
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC 429
Query: 575 EAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSC 634
+A+ FE M+ + D T +L ACS G + G I +++ + P +
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTA 488
Query: 635 IVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHN- 693
+VD+ + GYLE A+R + W + A +G G + + E H+
Sbjct: 489 LVDMYSKCGYLEAAQRCFDS--ISWKDVVSWGIL--IAGYGFHGKGDIALEIYSEFLHSG 544
Query: 694 ---NPSVYVLLSNICAAAGQWEEAANL-RDMMREFGT 726
N +++ + + C+ G ++ + M+R+FG
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV 581
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 244/455 (53%), Gaps = 10/455 (2%)
Query: 289 KACFSPMEATFV-SVMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMTMYSCFGKV 344
+ + P + F +++ C+ ++ Q + A +++ F + N + MY+ G +
Sbjct: 52 EGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSL 111
Query: 345 NEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS 404
EA+ +FE+M +RD V+W +IS + Q + A+L + +M R G P+EFT S++ A+
Sbjct: 112 EEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAA 171
Query: 405 DSLQ---VVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWN 460
+ + +H K G V V ++L+ Y R G ++ A +F L ++ +SWN
Sbjct: 172 AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 461 TIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
+I+G + LE F +L +P+ + GK VH Y+++
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCF 580
G GN L+ MYAK GS+ + +F+ + KRD +SWN+L++AYAQHG GKEAV F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 581 EAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLG 640
E M+ GI P+ +F VL+ACSH GL+D+G +++M G VP H+ +VDLLG
Sbjct: 352 EEMR-RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLG 409
Query: 641 RSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVL 700
R+G L A R I+ + I +L +AC H N LG A + E D ++P +V+
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
Query: 701 LSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
L NI A+ G+W +AA +R M+E G K+P CSW+
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 212/446 (47%), Gaps = 15/446 (3%)
Query: 184 DMQKIGVRPDGYTFTSMLSLCSV-ELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCG 242
D++ + D + ++L C+V +LL GR VH+ +++S F + N+L+ MY CG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 243 CVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSV 302
+ +A +VF ++ RD VT+ +I G + DR DA + F M + +SP E T SV
Sbjct: 110 SLEEARKVFEKMPQ--RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSV 167
Query: 303 MSSCSSLRVGC---QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL 359
+ + ++ R GC Q +K GFD+ V +A + +Y+ +G +++AQ +F+ +E R+
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
Query: 360 VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSL 416
VSWN +I+ + + E A+ + M R G P F+Y SL GA S +E VH+
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 417 LSKIGLMKVEVL-NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
+ K G V N+L+ Y ++G I+ A +IF L + ++SWN++++ + +G +
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 476 LEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTM 535
+ F + ++PN G + + + G E +V +
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 536 YAKCGSLDGSLGVFNAMVKRDTIS-WNALISAYAQHGQGKEAVCCFE-AMQISPGIEPDH 593
+ G L+ +L M T + W AL++A H + E ++ P D
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD---DP 464
Query: 594 ATFTIVLSACSHVGLVDDGTRIFDMM 619
I+ + + G +D R+ M
Sbjct: 465 GPHVILYNIYASGGRWNDAARVRKKM 490
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 194/415 (46%), Gaps = 55/415 (13%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G +HAH +++ + + N+LL++YAK L + F ++ D +WTT++S ++
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
DAL F+QM + G P+ +T +
Sbjct: 139 HDRPCDALLFFNQM---------------------------------LRFGYSPNEFTLS 165
Query: 199 SMLSLCSVELLDF-GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
S++ + E G +H ++ GF + V ++L+ +Y G + DA VF +E+
Sbjct: 166 SVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES- 224
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQ 314
R+ V++NA+I G R E A +F+ M + F P ++ S+ +CSS L G
Sbjct: 225 -RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 315 AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENL 374
A IK+G N + MY+ G +++A+ IF+R+ +RD+VSWN +++ + Q
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGA-SDSLQVVEMVH--SLLSKIGLMK-----VE 426
+ A+ + +MRRVGI P+E ++ S+L A S S + E H L+ K G++ V
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT 403
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSA 481
V++ L R G +N AL+ +P I I L N C + + A
Sbjct: 404 VVDLL----GRAGDLNRALRFIEEMP----IEPTAAIWKALLNACRMHKNTELGA 450
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 41/283 (14%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
L++ ++ ++ ++L F Q+ P+ +TLS+ I A+A R G+QLH
Sbjct: 132 LISGYSQHDRPCDALLFFNQM-LRFGYSPNEFTLSSVIKAAAAERRGCC----GHQLHGF 186
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
++ G ++ HV ++LL LY + + + F +E +D SW +++ R
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR------- 239
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC- 204
R G + A +LF+ M + G RP +++ S+ C
Sbjct: 240 ---------------------RSGTEK-----ALELFQGMLRDGFRPSHFSYASLFGACS 273
Query: 205 SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTY 264
S L+ G+ VH+ +I+SG N+L+ MY G + DA ++F + RD V++
Sbjct: 274 STGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK--RDVVSW 331
Query: 265 NAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
N+++ + ++A F +M++ P E +F+SV+++CS
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 39/218 (17%)
Query: 9 QMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASAN 68
Q+ + S + N L+A R + ++L+LF Q RP H++ ++ A ++
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELF-QGMLRDGFRPSHFSYASLFGACSS 274
Query: 69 TRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYS 128
T G +HA+ I++G K + N+LL +YAK+ + + F + D S
Sbjct: 275 T----GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS 330
Query: 129 WTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI 188
W ++L+A + G AVW F +M+++
Sbjct: 331 WNSLLTAYAQHGF--------------GKEAVW-------------------WFEEMRRV 357
Query: 189 GVRPDGYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFL 225
G+RP+ +F S+L+ CS LLD G H + ++ + G +
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 190/585 (32%), Positives = 287/585 (49%), Gaps = 50/585 (8%)
Query: 196 TFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCG----------- 242
TF +L L SV D G+ +H++ ++S + T + N + +Y CG
Sbjct: 10 TFRDLL-LKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYS 68
Query: 243 ----------CVVDAY----------QVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFV 282
+V AY Q+F E+ D V+YN +I G A V
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQP--DTVSYNTLISGYADARETFAAMV 126
Query: 283 MFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQ--SIKTGFDAYTAVNNATMTMYSC 340
+F+ M+K F T ++++C RV Q S+ GFD+Y++VNNA +T YS
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCD-RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 341 FGKVNEAQNIFERMEE-RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGS 399
G + EA ++F M+E RD VSWN MI + Q A+ Y +M G + D FT S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 400 LLGASDSLQVV---EMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINW---ALQIFSNLP 452
+L A SL + H L K G + V + LI Y + G + + ++F +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 453 YKSLISWNTIISGFLTNG-CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGK 511
L+ WNT+ISG+ N + ++ F + +P+ K
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 512 QVHGYILR-HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQH 570
Q+HG ++ H S+ IS+ NAL+++Y K G+L + VF+ M + + +S+N +I YAQH
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 571 GQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVD 630
G G EA+ ++ M + GI P+ TF VLSAC+H G VD+G F+ M + P +
Sbjct: 426 GHGTEALLLYQRM-LDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAE 484
Query: 631 HFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEK 690
H+SC++DLLGR+G LEEAER I + S +L AC H N+ L A L+
Sbjct: 485 HYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVM 544
Query: 691 DHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ YV+L+N+ A A +WEE A++R MR K+PGCSWI
Sbjct: 545 QPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 252/507 (49%), Gaps = 20/507 (3%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G LHA +++ + + ++++N ++LY+K L+ AF E P+ +S+ ++ A +
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
+ A +LFD++P V+ +N +I+ AD A LF+ M+K+G DG+T +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVS-YNTLISGY-ADARETFAAMVLFKRMRKLGFEVDGFTLS 144
Query: 199 SMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
+++ C + +D + +H + GF + +SV N+ +T Y G + +A VF ++ L
Sbjct: 145 GLIAAC-CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE-L 202
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQA 315
RD V++N+MI + A ++++M F T SV+++ +SL G Q
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVN---EAQNIFERMEERDLVSWNIMISMF-FQ 371
+ IK GF + V + + YS G + +++ +F+ + DLV WN MIS +
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMN 322
Query: 372 ENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQV---VEMVHSLL--SKIGLMKVE 426
E L+E A+ ++ +M+R+G PD+ ++ + A +L + +H L S I ++
Sbjct: 323 EELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
V N+LI+ Y ++G + A +F +P + +S+N +I G+ +G + L + +L++
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFS--SEISLGNALVTMYAKCGSLDG 544
+ PN G++ ++ F E + ++ + + G L+
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFN-TMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 545 SLGVFNAM-VKRDTISWNALISAYAQH 570
+ +AM K +++W AL+ A +H
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRKH 528
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 268 bits (686), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 250/495 (50%), Gaps = 18/495 (3%)
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLR 310
+ +G ++ N +I L + + + A + SP + T+ ++ C SSL
Sbjct: 39 ISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLS 94
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFF 370
+ + G D + + MYS G V+ A+ +F++ +R + WN +
Sbjct: 95 DALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALT 154
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS-------DSLQVVEMVHSLLSKIGLM 423
E + Y KM R+G+E D FTY +L A + L + +H+ L++ G
Sbjct: 155 LAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS 214
Query: 424 K-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL 482
V ++ +L+ Y R G +++A +F +P ++++SW+ +I+ + NG + L F +
Sbjct: 215 SHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 483 LNTPL--KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
+ PN+ GK +HGYILR G S + + +ALVTMY +CG
Sbjct: 275 MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCG 334
Query: 541 SLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
L+ VF+ M RD +SWN+LIS+Y HG GK+A+ FE M ++ G P TF VL
Sbjct: 335 KLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM-LANGASPTPVTFVSVL 393
Query: 601 SACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGAN 660
ACSH GLV++G R+F+ M +G P ++H++C+VDLLGR+ L+EA ++++
Sbjct: 394 GACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPG 453
Query: 661 SNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDM 720
+ SL +C HGN+ L +R L + N YVLL++I A A W+E ++ +
Sbjct: 454 PKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKL 513
Query: 721 MREFGTTKQPGCSWI 735
+ G K PG W+
Sbjct: 514 LEHRGLQKLPGRCWM 528
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 155/297 (52%), Gaps = 14/297 (4%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRD 184
D + T ++ + LG V A K+FD+ R+ + VWNA+ R GH + L+
Sbjct: 111 DPFLATKLIGMYSDLGSVDYARKVFDKTRKRT-IYVWNALF-RALTLAGHGEEVLGLYWK 168
Query: 185 MQKIGVRPDGYTFTSML-----SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYF 239
M +IGV D +T+T +L S C+V L G+ +H+ + R G+ + ++ +L+ MY
Sbjct: 169 MNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA 228
Query: 240 NCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC--FSPMEA 297
GCV A VFG + +R+ V+++AMI + + +A FR+M + SP
Sbjct: 229 RFGCVDYASYVFGGMP--VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 298 TFVSVMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM 354
T VSV+ +C+SL Q + ++ G D+ V +A +TMY GK+ Q +F+RM
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Query: 355 EERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE 411
+RD+VSWN +IS + + AI + +M G P T+ S+LGA +VE
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 173/601 (28%), Positives = 280/601 (46%), Gaps = 84/601 (13%)
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYN--AMIDGL 271
H+ +++SG + LI Y N C DA V + D Y+ ++I L
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIP----DPTIYSFSSLIYAL 91
Query: 272 VRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYT 328
+ + +F M P ++ C S+ +VG Q S +G D
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 329 AVNNATMTMYSCFGKVNEAQNIFERMEERD------------------------------ 358
V + MY G++ +A+ +F+RM ++D
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 359 -----LVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVV 410
+VSWN ++S F + ++ A++ + K+ +G PD+ T S+L G S+ L +
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 411 EMVHSLLSKIGLMKVE--------------------------------VLNSLIAAYCRN 438
++H + K GL+K + V N+ I RN
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 439 GRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXX 494
G ++ AL++F +++ +SW +II+G NG ++ LE F + +KPN
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 495 XXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK 554
HG+ HG+ +R + +G+AL+ MYAKCG ++ S VFN M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 555 RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTR 614
++ + WN+L++ ++ HG+ KE + FE++ + ++PD +FT +LSAC VGL D+G +
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESL-MRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAH 674
F MM YG P ++H+SC+V+LLGR+G L+EA LIK F +S + +L ++C
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 675 GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
N+ L + A L + NP YVLLSNI AA G W E ++R+ M G K PGCSW
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 735 I 735
I
Sbjct: 631 I 631
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 229/516 (44%), Gaps = 55/516 (10%)
Query: 4 CWFSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAI 63
C+ + +I I + L+ LT++ T+S+ +F+++ S H L PD + L
Sbjct: 65 CFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFS-HGLIPDSHVLPNLF 123
Query: 64 TASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEY 123
A +A G Q+H + +GL + V S+ +Y + + + F +
Sbjct: 124 KVCAEL----SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD 179
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFD 180
D + + +L A R G + + +++ +M + +N+ WN I++ H + A
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE-AVV 238
Query: 181 LFRDMQKIGVRPDGYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYF 239
+F+ + +G PD T +S+L S+ E+L+ GR +H VI+ G L V++++I MY
Sbjct: 239 MFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYG 298
Query: 240 NCGCVVDAYQVFGEVEA----------------GLRDH-----------------VTYNA 266
G V +F + E GL D V++ +
Sbjct: 299 KSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTS 358
Query: 267 MIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTG 323
+I G + ++ +A +FR+MQ A P T S++ +C ++L G +++
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
V +A + MY+ G++N +Q +F M ++LV WN +++ F + + +
Sbjct: 419 LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE 478
Query: 384 KMRRVGIEPDEFTYGSLLGASDSLQVVE----MVHSLLSKIGLM-KVEVLNSLIAAYCRN 438
+ R ++PD ++ SLL A + + + + + G+ ++E + ++ R
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRA 538
Query: 439 GRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQ 474
G++ A + +P++ ++ + G L N C LQ
Sbjct: 539 GKLQEAYDLIKEMPFEP----DSCVWGALLNSCRLQ 570
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 181/385 (47%), Gaps = 27/385 (7%)
Query: 9 QMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASAN 68
+M ++ I + I+ N +L+ RS H E++ +F +IH PD T+S+ + + +
Sbjct: 207 EMESSGIEA-NIVSWNGILSGFNRSGYHKEAVVMFQKIHHL-GFCPDQVTVSSVLPSVGD 264
Query: 69 TRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYS 128
+ G +H + I+ GL V ++++ +Y K+ + + F + E +
Sbjct: 265 SE----MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGV 320
Query: 129 WTTMLSASTRLGHVGDALKLFDQMPNRS---NVAVWNAIITRCGADNGHDDVAFDLFRDM 185
++ +R G V AL++F+ ++ NV W +II C A NG D A +LFR+M
Sbjct: 321 CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGC-AQNGKDIEALELFREM 379
Query: 186 QKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCV 244
Q GV+P+ T SML C ++ L GR H +R L V ++LI MY CG +
Sbjct: 380 QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRI 439
Query: 245 VDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
+ VF + ++ V +N++++G + ++ +F + + P +F S++S
Sbjct: 440 NLSQIVFNMMPT--KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 305 SCSSLRVGCQ--------AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME- 355
+C + + + ++ IK + Y+ + N + GK+ EA ++ + M
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN----LLGRAGKLQEAYDLIKEMPF 553
Query: 356 ERDLVSWNIMI-SMFFQENLNETAI 379
E D W ++ S Q N++ I
Sbjct: 554 EPDSCVWGALLNSCRLQNNVDLAEI 578
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 268/536 (50%), Gaps = 16/536 (2%)
Query: 212 GRHVHSVVIRSGFLARTSVV-NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDG 270
G+ +H ++R GFL + SL+ MY CG + A VFG E RD YNA+I G
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE---RDVFGYNALISG 135
Query: 271 LVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVG--CQAQAQSIKTGFDAYT 328
V DA +R+M+ P + TF S++ ++ + + + K GFD+
Sbjct: 136 FVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDC 195
Query: 329 AVNNATMTMYSCFGKVNEAQNIFERMEERD-LVSWNIMISMFFQENLNETAILTYLKMRR 387
V + +T YS F V +AQ +F+ + +RD V WN +++ + Q E A+L + KMR
Sbjct: 196 YVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
Query: 388 VGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINW 443
G+ T S+L A S + +H L K G + V N+LI Y ++ +
Sbjct: 256 EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 444 ALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXX 503
A IF + + L +WN+++ G L F +L + ++P+
Sbjct: 316 ANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGR 375
Query: 504 XXXXXHGKQVHGYILRHGF----SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTIS 559
G+++HGY++ G SS + N+L+ MY KCG L + VF++M +D+ S
Sbjct: 376 LASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSAS 435
Query: 560 WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
WN +I+ Y G+ A+ F M G++PD TF +L ACSH G +++G M
Sbjct: 436 WNIMINGYGVQSCGELALDMFSCM-CRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM 494
Query: 620 VNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRL 679
+Y +P+ DH++C++D+LGR+ LEEA L N + S+ S+C HGN L
Sbjct: 495 ETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDL 554
Query: 680 GRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ + L E + + YVL+SN+ AG++EE ++RD MR+ K PGCSWI
Sbjct: 555 ALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWI 610
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 203/463 (43%), Gaps = 49/463 (10%)
Query: 42 LFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTF--GNQLHAHAIRTG-LKAHSHVA 98
L++ + P Y T A + A + G Q+H +R G L
Sbjct: 40 LYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAG 99
Query: 99 NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNV 158
SL+++YAK + RA + S R +V
Sbjct: 100 TSLVNMYAKC---GLMRRA------------VLVFGGSER------------------DV 126
Query: 159 AVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSV 218
+NA+I+ NG A + +R+M+ G+ PD YTF S+L L + VH +
Sbjct: 127 FGYNALISGFVV-NGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGL 185
Query: 219 VIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNE 278
+ GF + V + L+T Y V DA +VF E+ D V +NA+++G ++ R E
Sbjct: 186 AFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDEL-PDRDDSVLWNALVNGYSQIFRFE 244
Query: 279 DAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATM 335
DA ++F M++ T SV+S+ + + G ++KTG + V+NA +
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 336 TMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEF 395
MY + EA +IFE M+ERDL +WN ++ + ++ + + +M GI PD
Sbjct: 305 DMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIV 364
Query: 396 TYGSLL---GASDSLQVVEMVHSLLSKIGLMKVE-----VLNSLIAAYCRNGRINWALQI 447
T ++L G SL+ +H + GL+ + + NSL+ Y + G + A +
Sbjct: 365 TLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMV 424
Query: 448 FSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
F ++ K SWN +I+G+ C L+ FS + +KP+
Sbjct: 425 FDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPD 467
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 192/415 (46%), Gaps = 59/415 (14%)
Query: 3 KCWFSRQMSTTTISSEQ-ILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLST 61
KC R+ SE+ + N L++ + ++++ + ++ ++ L PD YT +
Sbjct: 108 KCGLMRRAVLVFGGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL-PDKYTFPS 166
Query: 62 AITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEI 121
+ S A + ++H A + G + +V + L++ Y+K F +
Sbjct: 167 LLKGSD-----AMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSK----------FMSV 211
Query: 122 EYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDV---- 177
E DA K+FD++P+R + +WNA++ NG+ +
Sbjct: 212 E---------------------DAQKVFDELPDRDDSVLWNALV------NGYSQIFRFE 244
Query: 178 -AFDLFRDMQKIGVRPDGYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLI 235
A +F M++ GV +T TS+LS +V +D GR +H + +++G + V N+LI
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 236 TMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPM 295
MY + +A +F ++ RD T+N+++ ++ +F M + P
Sbjct: 305 DMYGKSKWLEEANSIFEAMDE--RDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 296 EATFVSVMSSC---SSLRVGCQAQAQSIKTGF----DAYTAVNNATMTMYSCFGKVNEAQ 348
T +V+ +C +SLR G + I +G + ++N+ M MY G + +A+
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 349 NIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+F+ M +D SWNIMI+ + ++ E A+ + M R G++PDE T+ LL A
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 97/252 (38%), Gaps = 55/252 (21%)
Query: 2 KKCWFSRQMSTTTISSEQ-ILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLS 60
K W S E+ + N +L H +L LF ++ S +RPD TL+
Sbjct: 309 KSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS-GIRPDIVTLT 367
Query: 61 TAITASANTRPAATATTFGNQLHAHAIRTGL----KAHSHVANSLLSLYAKAEDLASVER 116
T + R A+ G ++H + I +GL ++ + NSL+ +Y K DL
Sbjct: 368 TVLPTCG--RLASLRQ--GREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 117 AFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDD 176
F + D SW N+ + + CG +
Sbjct: 424 VFDSMRVKDSASW---------------------------NIMINGYGVQSCG------E 450
Query: 177 VAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSG--FLARTSVVNSL 234
+A D+F M + GV+PD TF +L CS HS + G FLA+ V ++
Sbjct: 451 LALDMFSCMCRAGVKPDEITFVGLLQACS----------HSGFLNEGRNFLAQMETVYNI 500
Query: 235 ITMYFNCGCVVD 246
+ + CV+D
Sbjct: 501 LPTSDHYACVID 512
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/524 (31%), Positives = 251/524 (47%), Gaps = 35/524 (6%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
R VHS +I +S+ L+ Y + V A +VF E+ R+ + N MI V
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE--RNVIIINVMIRSYV 116
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTA 329
+ +F M P TF V+ +CS ++ +G + + K G +
Sbjct: 117 NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
V N ++MY G ++EA+ + + M RD+VSWN ++ + Q + A+ +M V
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 390 IEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFS 449
I D T SLL A V N+ + + +F
Sbjct: 237 ISHDAGTMASLLPA-----------------------VSNTTTE------NVMYVKDMFF 267
Query: 450 NLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXH 509
+ KSL+SWN +I ++ N P++ +E +S + +P+A
Sbjct: 268 KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 510 GKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQ 569
GK++HGYI R + L NAL+ MYAKCG L+ + VF M RD +SW A+ISAY
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387
Query: 570 HGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSV 629
G+G +AV F +Q S G+ PD F L+ACSH GL+++G F +M + Y P +
Sbjct: 388 SGRGCDAVALFSKLQDS-GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL 446
Query: 630 DHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLE 689
+H +C+VDLLGR+G ++EA R I+ N + +L AC H + +G + A L +
Sbjct: 447 EHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
Query: 690 KDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCS 733
YVLLSNI A AG+WEE N+R++M+ G K PG S
Sbjct: 507 LAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 175/367 (47%), Gaps = 43/367 (11%)
Query: 132 MLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR 191
++ A L V A K+FD++P R NV + N +I R +NG +F M VR
Sbjct: 80 LMRAYASLKDVASARKVFDEIPER-NVIIINVMI-RSYVNNGFYGEGVKVFGTMCGCNVR 137
Query: 192 PDGYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
PD YTF +L CS + GR +H + G + V N L++MY CG + +A V
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR 310
E+ RD V++N+++ G + R +DA + R+M+ S T S++ + S+
Sbjct: 198 LDEMSR--RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN-- 253
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFF 370
T N MY +++F +M ++ LVSWN+MI ++
Sbjct: 254 -----------------TTTEN---VMY--------VKDMFFKMGKKSLVSWNVMIGVYM 285
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIGLMKVEV 427
+ + A+ Y +M G EPD + S+L G + +L + + +H + + L+ +
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 428 L-NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIIS--GFLTNGCPLQGLEQFSALLN 484
L N+LI Y + G + A +F N+ + ++SW +IS GF GC L FS L +
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL--FSKLQD 403
Query: 485 TPLKPNA 491
+ L P++
Sbjct: 404 SGLVPDS 410
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 171/426 (40%), Gaps = 75/426 (17%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I ++ +N ++ + + + E +K+F + + +RPDHYT + A + +
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACS----CSG 154
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G ++H A + GL + V N L+S+Y K L+ E+ D SW +++
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 135 ASTRLGHVGDALKLFDQM----------------PNRSNVAV------------------ 160
+ DAL++ +M P SN
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL 274
Query: 161 --WNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHS 217
WN +I N A +L+ M+ G PD + TS+L C L G+ +H
Sbjct: 275 VSWNVMIG-VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHG 333
Query: 218 VVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRN 277
+ R + + N+LI MY CGC+ A VF +++ RD V++ AMI R
Sbjct: 334 YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS--RDVVSWTAMISAYGFSGRG 391
Query: 278 EDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTM 337
DA +F +Q + P FV+ +++CS A ++ G
Sbjct: 392 CDAVALFSKLQDSGLVPDSIAFVTTLAACS--------HAGLLEEG-------------- 429
Query: 338 YSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTY 397
SCF + + I R+E M+ + + + A Y ++ + +EP+E +
Sbjct: 430 RSCFKLMTDHYKITPRLEH-----LACMVDLLGRAGKVKEA---YRFIQDMSMEPNERVW 481
Query: 398 GSLLGA 403
G+LLGA
Sbjct: 482 GALLGA 487
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 10/220 (4%)
Query: 392 PDE--FTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSL----IAAYCRNGRINWAL 445
P E F G +L ++ + VHS +I L + +SL + AY + A
Sbjct: 38 PQETVFLLGQVLDTYPDIRTLRTVHS---RIILEDLRCNSSLGVKLMRAYASLKDVASAR 94
Query: 446 QIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXX 505
++F +P +++I N +I ++ NG +G++ F + ++P+ Y
Sbjct: 95 KVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154
Query: 506 XXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALIS 565
G+++HG + G SS + +GN LV+MY KCG L + V + M +RD +SWN+L+
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 566 AYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSH 605
YAQ+ + +A+ M+ S I D T +L A S+
Sbjct: 215 GYAQNQRFDDALEVCREME-SVKISHDAGTMASLLPAVSN 253
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/556 (30%), Positives = 287/556 (51%), Gaps = 25/556 (4%)
Query: 200 MLSLCSVE--LLDFGRHVHSVVIRS--------GFLARTSVV--NSLITMYFNCGCVVDA 247
+LS+C E G +H+ +I++ + R ++V NSL+++Y CG +VDA
Sbjct: 50 LLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDA 109
Query: 248 YQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSC 306
++F E+ +RD ++ N + G +R E FV+ + M F AT V+S C
Sbjct: 110 IKLFDEMP--MRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFD--HATLTIVLSVC 165
Query: 307 SSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
+ V A +I +G+D +V N +T Y G + +F+ M R++++
Sbjct: 166 DTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLT 225
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA-SDSLQVVE--MVHSLLSKI 420
+IS + L+E + + MRR + P+ TY S L A S S ++VE +H+LL K
Sbjct: 226 AVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKY 285
Query: 421 GL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQF 479
G+ ++ + ++L+ Y + G I A IF + +S I+ G NG + ++ F
Sbjct: 286 GIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF 345
Query: 480 SALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKC 539
+L ++ +A GKQ+H +++ FS + N L+ MY+KC
Sbjct: 346 IRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKC 405
Query: 540 GSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIV 599
G L S VF M KR+ +SWN++I+A+A+HG G A+ +E M + ++P TF +
Sbjct: 406 GDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT-TLEVKPTDVTFLSL 464
Query: 600 LSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGA 659
L ACSHVGL+D G + + M ++G P +H++CI+D+LGR+G L+EA+ I
Sbjct: 465 LHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKP 524
Query: 660 NSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRD 719
+ I +L AC+ HG+ +G A L + ++ S ++L++NI ++ G+W+E A
Sbjct: 525 DCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIK 584
Query: 720 MMREFGTTKQPGCSWI 735
M+ G TK+ G S I
Sbjct: 585 RMKAMGVTKETGISSI 600
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 214/453 (47%), Gaps = 15/453 (3%)
Query: 129 WTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI 188
W ++LS + G + DA+KLFD+MP R ++ I+ N + F L + M
Sbjct: 93 WNSLLSLYAKCGKLVDAIKLFDEMPMRDVIS--QNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 189 GVRPDGYTFTSMLSLCSV-ELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA 247
G D T T +LS+C E + +H++ I SG+ SV N LIT YF CGC V
Sbjct: 151 G-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 248 YQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
VF + R+ +T A+I GL+ + +ED +F M++ P T++S +++CS
Sbjct: 210 RGVFDGMSH--RNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACS 267
Query: 308 -SLRV--GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
S R+ G Q A K G ++ + +A M MYS G + +A IFE E D VS +
Sbjct: 268 GSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTV 327
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIG 421
++ Q E AI +++M + G+E D ++LG S +SL + + +HSL+ K
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRK 387
Query: 422 LM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFS 480
V N LI Y + G + + +F +P ++ +SWN++I+ F +G L L+ +
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYE 447
Query: 481 ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISLGNALVTMYAKC 539
+ +KP G+++ + HG ++ M +
Sbjct: 448 EMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRA 507
Query: 540 GSLDGSLGVFNAM-VKRDTISWNALISAYAQHG 571
G L + +++ +K D W AL+ A + HG
Sbjct: 508 GLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 54/231 (23%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTF------- 78
+L L ++ E+++ F ++ L + AN A +F
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRM------------LQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G QLH+ I+ ++ V N L+++Y+K DL + F + + SW +M++A R
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
GH ALKL+++M + V+P TF
Sbjct: 436 HGHGLAALKLYEEMTT---------------------------------LEVKPTDVTFL 462
Query: 199 SMLSLCS-VELLDFGRHVHSVVIR-SGFLARTSVVNSLITMYFNCGCVVDA 247
S+L CS V L+D GR + + + G RT +I M G + +A
Sbjct: 463 SLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEA 513
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 263/530 (49%), Gaps = 12/530 (2%)
Query: 214 HVHSVVIRSG-FLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
+H+ VI +G L +S+ LI G + A +VF E+ R YN+MI
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQ--RGVSVYNSMIVVYS 92
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTA 329
R ++ ++ M P +TF + +C S L G +++ G+
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVF 152
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
V ++ + +Y GK++EA+ +F +M +RD++ W M++ F Q + A+ Y +M+ G
Sbjct: 153 VCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG 212
Query: 390 IEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWAL 445
D LL AS L +M VH L + GL M V V SL+ Y + G I A
Sbjct: 213 FGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVAS 272
Query: 446 QIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXX 505
++FS + +K+ +SW ++ISGF NG + E + + +P+
Sbjct: 273 RVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVG 332
Query: 506 XXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALIS 565
G+ VH YIL+ ++ AL+ MY+KCG+L S +F + ++D + WN +IS
Sbjct: 333 SLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMIS 391
Query: 566 AYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGF 625
Y HG G+E V F M S IEPDHATF +LSA SH GLV+ G F +M+N Y
Sbjct: 392 CYGIHGNGQEVVSLFLKMTES-NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKI 450
Query: 626 VPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVAR 685
PS H+ C++DLL R+G +EEA +I I +L S C H NL +G + A
Sbjct: 451 QPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAAN 510
Query: 686 LLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+L+ + ++ + L+SN A A +W+E A +R +MR K PG S I
Sbjct: 511 KILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAI 560
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 177/366 (48%), Gaps = 11/366 (3%)
Query: 132 MLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR 191
++++ R+G + A K+FD++P R V+V+N++I D+V L+ M ++
Sbjct: 56 LIASCGRIGEISYARKVFDELPQR-GVSVYNSMIVVYSRGKNPDEV-LRLYDQMIAEKIQ 113
Query: 192 PDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
PD TFT + C S +L+ G V + G+ V +S++ +Y CG + +A +
Sbjct: 114 PDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVL 173
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL- 309
FG++ RD + + M+ G + ++ A +R+MQ F + ++ + L
Sbjct: 174 FGKMAK--RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLG 231
Query: 310 --RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMIS 367
++G +TG V + + MY+ G + A +F RM + VSW +IS
Sbjct: 232 DTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLIS 291
Query: 368 MFFQENLNETAILTYLKMRRVGIEPDEFTY-GSLLGASD--SLQVVEMVHSLLSKIGLMK 424
F Q L A ++M+ +G +PD T G L+ S SL+ +VH + K ++
Sbjct: 292 GFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD 351
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
+L+ Y + G ++ + +IF ++ K L+ WNT+IS + +G + + F +
Sbjct: 352 RVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE 411
Query: 485 TPLKPN 490
+ ++P+
Sbjct: 412 SNIEPD 417
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 189/455 (41%), Gaps = 57/455 (12%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++ +R E L+L+ Q+ + ++PD T + I A + G +
Sbjct: 85 NSMIVVYSRGKNPDEVLRLYDQM-IAEKIQPDSSTFTMTIKACL----SGLVLEKGEAVW 139
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
A+ G K V +S+L+LY K + E F ++ D WTTM+ T G
Sbjct: 140 CKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMV---TGFAQAG 196
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
+LK A + +R+MQ G D +L
Sbjct: 197 KSLK------------------------------AVEFYREMQNEGFGRDRVVMLGLLQ- 225
Query: 204 CSVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH 261
S +L D GR VH + R+G V SL+ MY G + A +VF + +
Sbjct: 226 ASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM--FKTA 283
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQ 318
V++ ++I G + AF +MQ F P T V V+ +CS SL+ G
Sbjct: 284 VSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCY 343
Query: 319 SIKTG-FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
+K D TA A M MYS G ++ ++ IFE + +DLV WN MIS + +
Sbjct: 344 ILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQE 401
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNS------L 431
+ +LKM IEPD T+ SLL A +VE S + + K ++ S L
Sbjct: 402 VVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFS-VMINKYKIQPSEKHYVCL 460
Query: 432 IAAYCRNGRINWALQIFSNLPY-KSLISWNTIISG 465
I R GR+ AL + ++ +L W ++SG
Sbjct: 461 IDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 263 bits (672), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 163/550 (29%), Positives = 291/550 (52%), Gaps = 15/550 (2%)
Query: 195 YTFTSMLSLCSVELLDFG-RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
+ F+ +L C E G + + + +++SGF A S + L+ CG + A QVF
Sbjct: 66 HNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISG-SKLVDASLKCGDIDYARQVFDG 124
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC 313
+ R VT+N++I L++ R+++A M+R M P E T SV + S L +
Sbjct: 125 MSE--RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEK 182
Query: 314 QAQAQ---SIKTGFDAYTA-VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMF 369
+AQ ++ G + V +A + MY FGK EA+ + +R+EE+D+V +I +
Sbjct: 183 EAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 242
Query: 370 FQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLMK-V 425
Q+ + A+ + M ++P+E+TY S+L + +L+ + +++H L+ K G +
Sbjct: 243 SQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESAL 302
Query: 426 EVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNT 485
SL+ Y R ++ +L++F + Y + +SW ++ISG + NG L +F ++
Sbjct: 303 ASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD 362
Query: 486 PLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGS 545
+KPN++ G+Q+HG + ++GF + G+ L+ +Y KCG D +
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 546 LGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSH 605
VF+ + + D IS N +I +YAQ+G G+EA+ FE M I+ G++P+ T VL AC++
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM-INLGLQPNDVTVLSVLLACNN 481
Query: 606 VGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW 665
LV++G +FD + + DH++C+VDLLGR+G LEEAE ++ + +
Sbjct: 482 SRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAE-MLTTEVINPDLVLWR 539
Query: 666 SLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFG 725
+L SAC H + + + R +LE + + +L+SN+ A+ G+W ++ M++
Sbjct: 540 TLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMK 599
Query: 726 TTKQPGCSWI 735
K P SW+
Sbjct: 600 LKKNPAMSWV 609
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 219/482 (45%), Gaps = 22/482 (4%)
Query: 123 YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLF 182
+P + S + ++ AS + G + A ++FD M R ++ WN++I + A +++
Sbjct: 96 FPAEISGSKLVDASLKCGDIDYARQVFDGMSER-HIVTWNSLIAYL-IKHRRSKEAVEMY 153
Query: 183 RDMQKIGVRPDGYTFTSML-SLCSVELLDFGRHVHSVVIRSGF-LARTSVVNSLITMYFN 240
R M V PD YT +S+ + + L + H + + G ++ V ++L+ MY
Sbjct: 154 RLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVK 213
Query: 241 CGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFV 300
G +A V VE +D V A+I G + + +A F+ M P E T+
Sbjct: 214 FGKTREAKLVLDRVEE--KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYA 271
Query: 301 SVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER 357
SV+ SC +L+ G +K+GF++ A + +TMY V+++ +F+ +E
Sbjct: 272 SVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYP 331
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVH 414
+ VSW +IS Q E A++ + KM R I+P+ FT S L +L + E +H
Sbjct: 332 NQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIH 391
Query: 415 SLLSKIGLMKVEVLNS-LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPL 473
+++K G + + S LI Y + G + A +F L +IS NT+I + NG
Sbjct: 392 GIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGR 451
Query: 474 QGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN--- 530
+ L+ F ++N L+PN G ++ + +I L N
Sbjct: 452 EALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK----DKIMLTNDHY 507
Query: 531 -ALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAV-CCFEAMQISPG 588
+V + + G L+ + + ++ D + W L+SA H + + A + ++I PG
Sbjct: 508 ACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPG 567
Query: 589 IE 590
E
Sbjct: 568 DE 569
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 157/365 (43%), Gaps = 60/365 (16%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + ++ + L+ ++ + TE++K F Q ++P+ YT ++ + + N +
Sbjct: 227 VEEKDVVLITALIVGYSQKGEDTEAVKAF-QSMLVEKVQPNEYTYASVLISCGNLKDIGN 285
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G +H +++G ++ SLL++Y + + R F IEYP+ SWT+++S
Sbjct: 286 ----GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLIS 341
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+ NG +++A FR M + ++P+
Sbjct: 342 GLVQ---------------------------------NGREEMALIEFRKMMRDSIKPNS 368
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
+T +S L CS + + + GR +H +V + GF + LI +Y CGC A VF
Sbjct: 369 FTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDT 428
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV-- 311
+ D ++ N MI + +A +F M P + T +SV+ +C++ R+
Sbjct: 429 LSE--VDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVE 486
Query: 312 -GCQAQAQSIKTGFDAYTAVN-NATMTMYSCF-------GKVNEAQNIFERMEERDLVSW 362
GC+ FD++ T Y+C G++ EA+ + + DLV W
Sbjct: 487 EGCEL--------FDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLW 538
Query: 363 NIMIS 367
++S
Sbjct: 539 RTLLS 543
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 288/622 (46%), Gaps = 62/622 (9%)
Query: 170 ADNGHDDVAFDLFR--DMQKIGVRPDGYTFTSMLSLCS--VELLDF--GRHVHSVVIRSG 223
A +GH AF F +Q D S SL S V++ F G VH+ I SG
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 224 FLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH-----VTYNAMIDGLVRVDRNE 278
+ +V L+T Y A+ + E ++ + + + +N +I + + E
Sbjct: 74 VEYHSVLVPKLVTFY-------SAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFE 126
Query: 279 DAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNATM 335
+ ++ M P T+ SV+ +C + G + + + V NA +
Sbjct: 127 EVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALI 186
Query: 336 TMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEF 395
+MY F + A+ +F+RM ERD VSWN +I+ + E + A + KM G+E
Sbjct: 187 SMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVI 246
Query: 396 TY----------GSLLGA----------SDSLQVVEMVHSL--LSKIGLMKV-------- 425
T+ G+ +GA SL V M+ L S IG +++
Sbjct: 247 TWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLA 306
Query: 426 ---------EVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGL 476
V N+LI Y + + AL +F SL +WN+IISG+ +
Sbjct: 307 IHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEAS 366
Query: 477 EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG-FSSEISLGNALVTM 535
+L +PN+ HGK+ H YILR F L N+LV +
Sbjct: 367 HLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDV 426
Query: 536 YAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHAT 595
YAK G + + V + M KRD +++ +LI Y G+G A+ F+ M S GI+PDH T
Sbjct: 427 YAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRS-GIKPDHVT 485
Query: 596 FTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGG 655
VLSACSH LV +G R+F M YG P + HFSC+VDL GR+G+L +A+ +I
Sbjct: 486 VVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNM 545
Query: 656 YFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAA 715
+ + +L +AC HGN ++G+ A LLE NP YVL++N+ AAAG W + A
Sbjct: 546 PYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLA 605
Query: 716 NLRDMMREFGTTKQPGCSWIGT 737
+R +MR+ G K PGC+WI T
Sbjct: 606 EVRTIMRDLGVKKDPGCAWIDT 627
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 218/473 (46%), Gaps = 27/473 (5%)
Query: 21 LKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGN 80
L N L+A+ ++ E + + ++ S +RPD +T + + A T A FG
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRM-VSKGIRPDAFTYPSVLKACGETLDVA----FGR 164
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
+H + K+ +V N+L+S+Y + ++ R F + D SW +++ G
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEG 224
Query: 141 HVGDALKLFDQM---PNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
+A +LFD+M +V WN I C G+ A L M+ D
Sbjct: 225 MWSEAFELFDKMWFSGVEVSVITWNIISGGC-LQTGNYVGALGLISRMRNFPTSLDPVAM 283
Query: 198 TSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
L CS + + G+ +H + I S + +V N+LITMY C + A VF + E
Sbjct: 284 IIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEE 343
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGC 313
T+N++I G +++++E+A + R+M A F P T S++ C ++L+ G
Sbjct: 344 --NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
Query: 314 QAQAQSIKTG-FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
+ ++ F YT + N+ + +Y+ GK+ A+ + + M +RD V++ +I + +
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQ 461
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKI----GLMK-VEV 427
A+ + +M R GI+PD T ++L A ++V L K+ G+ ++
Sbjct: 462 GEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH 521
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNTIISGFLTNGCPLQGLEQF 479
+ ++ Y R G + A I N+PYK S +W T++ N C + G Q
Sbjct: 522 FSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLL-----NACHIHGNTQI 569
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 238/445 (53%), Gaps = 8/445 (1%)
Query: 299 FVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME 355
+ +++++C +LR G + A IKT + T + + Y + +A+ + + M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 356 ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEM 412
E+++VSW MIS + Q + A+ + +M R +P+EFT+ ++L + + L + +
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 413 VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGC 471
+H L+ K + V +SL+ Y + G+I A +IF LP + ++S II+G+ G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 472 PLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNA 531
+ LE F L + + PN HGKQ H ++LR L N+
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 532 LVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEP 591
L+ MY+KCG+L + +F+ M +R ISWNA++ Y++HG G+E + F M+ ++P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 592 DHATFTIVLSACSHVGLVDDGTRIFDMMV-NIYGFVPSVDHFSCIVDLLGRSGYLEEAER 650
D T VLS CSH + D G IFD MV YG P +H+ CIVD+LGR+G ++EA
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 651 LIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQ 710
IK + + SL AC H ++ +G V R L+E + N YV+LSN+ A+AG+
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 711 WEEAANLRDMMREFGTTKQPGCSWI 735
W + N+R MM + TK+PG SWI
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWI 499
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 172/318 (54%), Gaps = 13/318 (4%)
Query: 184 DMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCG 242
+M +G + + ++L+ C L G+ VH+ +I++ +L T + L+ Y C
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 243 CVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSV 302
C+ DA +V E+ ++ V++ AMI + + +A +F +M ++ P E TF +V
Sbjct: 102 CLEDARKVLDEMPE--KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 303 MSSC---SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL 359
++SC S L +G Q +K +D++ V ++ + MY+ G++ EA+ IFE + ERD+
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 360 VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE-----MVH 414
VS +I+ + Q L+E A+ + ++ G+ P+ TY SLL A L +++ H
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCH 279
Query: 415 SLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQ 474
L ++ V + NSLI Y + G +++A ++F N+P ++ ISWN ++ G+ +G +
Sbjct: 280 VLRRELPFYAV-LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338
Query: 475 GLEQFSALLNTP-LKPNA 491
LE F + + +KP+A
Sbjct: 339 VLELFRLMRDEKRVKPDA 356
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 170/395 (43%), Gaps = 62/395 (15%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G ++HAH I+T +++ LL Y K + L + E+ + SWT M+S ++
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
GH +AL +F +M M+ G +P+ +TF
Sbjct: 131 TGHSSEALTVFAEM--------------------------------MRSDG-KPNEFTFA 157
Query: 199 SMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
++L+ C L G+ +H ++++ + + V +SL+ MY G + +A ++F +
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE- 216
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQ 314
RD V+ A+I G ++ +E+A MF + SP T+ S++++ S L + G Q
Sbjct: 217 -RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 315 AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENL 374
A ++ Y + N+ + MYS G ++ A+ +F+ M ER +SWN M+ + + L
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 375 NETAILTYLKMR-RVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGL----------- 422
+ + MR ++PD T ++L H + GL
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCS--------HGRMEDTGLNIFDGMVAGEY 387
Query: 423 ---MKVEVLNSLIAAYCRNGRINWALQIFSNLPYK 454
E ++ R GRI+ A + +P K
Sbjct: 388 GTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 157/354 (44%), Gaps = 55/354 (15%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + ++ +++ +++ +E+L +F ++ S +P+ +T +T +T+ A+
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIR----AS 167
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G Q+H ++ +H V +SLL +YAKA
Sbjct: 168 GLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA-------------------------- 201
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
G + +A ++F+ +P R +V AII A G D+ A ++F + G+ P+
Sbjct: 202 -----GQIKEAREIFECLPER-DVVSCTAIIAGY-AQLGLDEEALEMFHRLHSEGMSPNY 254
Query: 195 YTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
T+ S+L+ L + LLD G+ H V+R + NSLI MY CG + A ++F
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDN 314
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQ-KACFSPMEATFVSVMSSCSSLRV- 311
+ R +++NAM+ G + + +FR M+ + P T ++V+S CS R+
Sbjct: 315 MPE--RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRME 372
Query: 312 --------GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER 357
G A K G + Y + + M G+++EA +RM +
Sbjct: 373 DTGLNIFDGMVAGEYGTKPGTEHYGCI----VDMLGRAGRIDEAFEFIKRMPSK 422
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 292/552 (52%), Gaps = 22/552 (3%)
Query: 197 FTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCG-CVVDAYQVF-G 252
+ S+L C+ ++ F G H+ V++SG +V NSL+++YF G + + +VF G
Sbjct: 64 YASLLQTCN-KVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL--- 309
++D +++ +M+ G V + A +F +M E T S + +CS L
Sbjct: 123 RF---VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEV 179
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMF 369
R+G I GF+ +++ +Y + +A+ +F+ M E D++ W ++S F
Sbjct: 180 RLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAF 239
Query: 370 FQENLNETAI-LTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MK 424
+ +L E A+ L Y R G+ PD T+G++L A +L+ ++ +H L G+
Sbjct: 240 SKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSN 299
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
V V +SL+ Y + G + A Q+F+ + K+ +SW+ ++ G+ NG + +E F +
Sbjct: 300 VVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE 359
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
L Y GK++HG +R G + + +AL+ +Y K G +D
Sbjct: 360 KDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDS 415
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+ V++ M R+ I+WNA++SA AQ+G+G+EAV F M + GI+PD+ +F +L+AC
Sbjct: 416 ASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDM-VKKGIKPDYISFIAILTACG 474
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNIC 664
H G+VD+G F +M YG P +H+SC++DLLGR+G EEAE L++ ++++
Sbjct: 475 HTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLW 534
Query: 665 WSLFSACAAHGNL-RLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
L CAA+ + R+ +A+ ++E + YVLLSN+ A G+ +A N+R +M
Sbjct: 535 GVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVR 594
Query: 724 FGTTKQPGCSWI 735
G K G SWI
Sbjct: 595 RGVAKTVGQSWI 606
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/542 (23%), Positives = 233/542 (42%), Gaps = 117/542 (21%)
Query: 6 FSRQMS---TTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTA 62
FS+ S T +ISS K + +L L + Q TE++++ HSS P L +
Sbjct: 10 FSQHASLCLTPSISSSAPTKQSRIL-ELCKLGQLTEAIRILNSTHSSEI--PATPKLYAS 66
Query: 63 ITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVAN----------------------- 99
+ + N + G Q HAH +++GL+ +V N
Sbjct: 67 LLQTCNK---VFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 100 ---------SLLSLYAKAEDLASVERAFAEIEY----PDDYSWTTMLSASTRLGHVG--- 143
S++S Y ++ F E+ ++++ ++ + A + LG V
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 144 --------------------------------DALKLFDQMPNRSNVAVWNAIITRCGAD 171
DA ++FD+MP +V W A+++ +
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE-PDVICWTAVLSAFSKN 242
Query: 172 NGHDDVAFDLFRDMQK-IGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTS 229
+ +++ A LF M + G+ PDG TF ++L+ C ++ L G+ +H +I +G +
Sbjct: 243 DLYEE-ALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 230 VVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK 289
V +SL+ MY CG V +A QVF + ++ V+++A++ G + +E A +FR+M++
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSK--KNSVSWSALLGGYCQNGEHEKAIEIFREMEE 359
Query: 290 A---CFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNE 346
CF T + + +++R+G + Q ++ G V +A + +Y G ++
Sbjct: 360 KDLYCF----GTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDS 415
Query: 347 AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS 406
A ++ +M R++++WN M+S Q E A+ + M + GI+PD ++ ++L A
Sbjct: 416 ASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGH 475
Query: 407 LQVVE--------MVHS---------------LLSKIGLMKVEVLNSLIAAYCRNGRINW 443
+V+ M S LL + GL + E N L A CRN W
Sbjct: 476 TGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFE-EAENLLERAECRNDASLW 534
Query: 444 AL 445
+
Sbjct: 535 GV 536
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 223/408 (54%), Gaps = 4/408 (0%)
Query: 331 NNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGI 390
+N + Y G + A+ +F+ M +R L +WN MI+ Q NE + + +M +G
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 391 EPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLMKVEVLNSLIA-AYCRNGRINWALQ 446
PDE+T GS+ S L+ V + +H K GL V+NS +A Y RNG++
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 447 IFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXX 506
+ ++P ++L++WNT+I G NGCP L + + + +PN
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 507 XXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISA 566
G+Q+H ++ G SS +++ ++L++MY+KCG L + F+ D + W+++ISA
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
Y HGQG EA+ F M +E + F +L ACSH GL D G +FDMMV YGF
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARL 686
P + H++C+VDLLGR+G L++AE +I+ + I +L SAC H N + + V +
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
Query: 687 LLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
+L+ D N+ + YVLL+N+ A+A +W + + +R MR+ K+ G SW
Sbjct: 388 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISW 435
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 177/367 (48%), Gaps = 13/367 (3%)
Query: 232 NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC 291
N LI Y G +V+A +VF E+ R T+NAMI GL++ + NE+ +FR+M
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPD--RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG 86
Query: 292 FSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQ 348
FSP E T SV S + LR +G Q +IK G + VN++ MY GK+ + +
Sbjct: 87 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146
Query: 349 NIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ 408
+ M R+LV+WN +I Q ET + Y M+ G P++ T+ ++L + L
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 409 VV---EMVHSLLSKIG-LMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIIS 464
+ + +H+ KIG V V++SLI+ Y + G + A + FS + + W+++IS
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 266
Query: 465 GFLTNGCPLQGLEQFSALL-NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYIL-RHGF 522
+ +G + +E F+ + T ++ N G ++ ++ ++GF
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCF- 580
+ +V + + G LD + + +M +K D + W L+SA H + A F
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
Query: 581 EAMQISP 587
E +QI P
Sbjct: 387 EILQIDP 393
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 181/377 (48%), Gaps = 21/377 (5%)
Query: 102 LSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVW 161
+S+Y+K D S + + + S +++ R G + +A K+FD+MP+R + W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDR-KLTTW 59
Query: 162 NAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVI 220
NA+I ++ LFR+M +G PD YT S+ S + + G+ +H I
Sbjct: 60 NAMIAGL-IQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 221 RSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDA 280
+ G V +SL MY G + D V + +R+ V +N +I G + E
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMP--VRNLVAWNTLIMGNAQNGCPETV 176
Query: 281 FVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATMTM 337
+++ M+ + P + TFV+V+SSCS L + G Q A++IK G + AV ++ ++M
Sbjct: 177 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM 236
Query: 338 YSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKM-RRVGIEPDEFT 396
YS G + +A F E+ D V W+ MIS + + AI + M + +E +E
Sbjct: 237 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 296
Query: 397 YGSLL------GASDS-LQVVE-MVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIF 448
+ +LL G D L++ + MV K GL + L+ R G ++ A I
Sbjct: 297 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLG---RAGCLDQAEAII 353
Query: 449 SNLPYKS-LISWNTIIS 464
++P K+ ++ W T++S
Sbjct: 354 RSMPIKTDIVIWKTLLS 370
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 159/355 (44%), Gaps = 55/355 (15%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++A L + + E L LF ++H PD YTL + + SA R + + G Q+H
Sbjct: 60 NAMIAGLIQFEFNEEGLSLFREMHGL-GFSPDEYTLGSVFSGSAGLR----SVSIGQQIH 114
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+ I+ GL+ V +SL +Y R G +
Sbjct: 115 GYTIKYGLELDLVVNSSLAHMY-------------------------------MRNGKLQ 143
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
D + MP R N+ WN +I A NG + L++ M+ G RP+ TF ++LS
Sbjct: 144 DGEIVIRSMPVR-NLVAWNTLIM-GNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSS 201
Query: 204 CS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
CS + + G+ +H+ I+ G + +VV+SLI+MY CGC+ DA + F E E D V
Sbjct: 202 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED--EDEV 259
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSLRVGCQA------ 315
+++MI + ++A +F M ++ E F++++ +CS + +
Sbjct: 260 MWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDM 319
Query: 316 --QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME-ERDLVSWNIMIS 367
+ K G YT V + + G +++A+ I M + D+V W ++S
Sbjct: 320 MVEKYGFKPGLKHYTCV----VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/487 (31%), Positives = 254/487 (52%), Gaps = 17/487 (3%)
Query: 260 DHVTYNAMIDGLVRV-DRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQA 315
+H ++N MI GL + +E A ++R M+ + P + T+ V +C+ L VG
Sbjct: 95 NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
+ K G + +N++ + MY+ G+V A+ +F+ + ERD VSWN MIS + +
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYA 214
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDSL------QVVEMVHSLLSKIGLMKVEVLN 429
+ A+ + KM G EPDE T S+LGA L +++E + ++ KIGL + +
Sbjct: 215 KDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEM-AITKKIGLSTF-LGS 272
Query: 430 SLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKP 489
LI+ Y + G ++ A ++F+ + K ++W +I+ + NG + + F + T + P
Sbjct: 273 KLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSP 332
Query: 490 NAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVF 549
+A GKQ+ + I + LV MY KCG ++ +L VF
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 392
Query: 550 NAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLV 609
AM ++ +WNA+I+AYA G KEA+ F+ M + P TF VLSAC H GLV
Sbjct: 393 EAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPS----DITFIGVLSACVHAGLV 448
Query: 610 DDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFS 669
G R F M +++G VP ++H++ I+DLL R+G L+EA ++ + + ++
Sbjct: 449 HQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILG 508
Query: 670 ACAAHGNLRLGRMVARLLLE-KDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTK 728
AC ++ + R+L+E K+ N YV+ SN+ A W+E+A +R +MR+ G K
Sbjct: 509 ACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVK 568
Query: 729 QPGCSWI 735
PGCSWI
Sbjct: 569 TPGCSWI 575
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 197/442 (44%), Gaps = 53/442 (11%)
Query: 23 LNHLLATLTRS-NQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQ 81
N+++ LT + N H +L L+ ++ S L+PD +T + A A G
Sbjct: 99 FNYMIRGLTNTWNDHEAALSLYRRMKFS-GLKPDKFTYNFVFIACAKLEEIGV----GRS 153
Query: 82 LHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGH 141
+H+ + GL+ H+ +SL+ +YAK + + F EI D SW +M+S + G+
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 142 VGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML 201
DA+ DLFR M++ G PD T SML
Sbjct: 214 AKDAM---------------------------------DLFRKMEEEGFEPDERTLVSML 240
Query: 202 SLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRD 260
CS + L GR + + I T + + LI+MY CG + A +VF ++ +D
Sbjct: 241 GACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIK--KD 298
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQA 317
V + AMI + ++ +AF +F +M+K SP T +V+S+C S L +G Q +
Sbjct: 299 RVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIET 358
Query: 318 QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
+ + V + MY G+V EA +FE M ++ +WN MI+ + + +
Sbjct: 359 HASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKE 418
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM----VHSLLSKIGLM-KVEVLNSLI 432
A+L + R+ + P + T+ +L A +V H + S GL+ K+E ++I
Sbjct: 419 ALLLF---DRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNII 475
Query: 433 AAYCRNGRINWALQIFSNLPYK 454
R G ++ A + P K
Sbjct: 476 DLLSRAGMLDEAWEFMERFPGK 497
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 5/245 (2%)
Query: 410 VEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
V + + +++ L VE N LI G N++ +FS + S+N +I G LTN
Sbjct: 50 VNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRG-LTN 108
Query: 470 GCPLQ--GLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEIS 527
L + + + LKP+ + G+ VH + + G ++
Sbjct: 109 TWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVH 168
Query: 528 LGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISP 587
+ ++L+ MYAKCG + + +F+ + +RDT+SWN++IS Y++ G K+A+ F M+
Sbjct: 169 INHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKME-EE 227
Query: 588 GIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEE 647
G EPD T +L ACSH+G + G R+ + M S S ++ + G+ G L+
Sbjct: 228 GFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDS 286
Query: 648 AERLI 652
A R+
Sbjct: 287 ARRVF 291
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 259 bits (663), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 179/595 (30%), Positives = 298/595 (50%), Gaps = 23/595 (3%)
Query: 156 SNVAVWNAIITRCGADNGHDDV-AFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFG-- 212
S+V WN I A N +D V + LFR+M++ G P+ +TF + C+ L D G
Sbjct: 15 SSVNAWNLQIRE--AVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA-RLADVGCC 71
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
VH+ +I+S F + V + + M+ C V A +VF + RD T+NAM+ G
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPE--RDATTWNAMLSGFC 129
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTA 329
+ + AF +FR+M+ +P T ++++ S S SL++ A I+ G D
Sbjct: 130 QSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT 189
Query: 330 VNNATMTMYSCFGKVNEAQNIFERME--ERDLVSWNIMISMF--FQENLNETAILTYLKM 385
V N ++ Y G ++ A+ +FE ++ +R +VSWN M + F E + A Y M
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD--AFGLYCLM 247
Query: 386 RRVGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRI 441
R +PD T+ +L + ++L ++HS +G +E +N+ I+ Y ++
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 442 NWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXX 501
A +F + ++ +SW +ISG+ G + L F A++ + KP+
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 502 XXXXXXXHGKQVHGYILRHGFSSE-ISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISW 560
GK + +G + + + NAL+ MY+KCGS+ + +F+ ++ ++W
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 561 NALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMV 620
+I+ YA +G EA+ F M I +P+H TF VL AC+H G ++ G F +M
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKM-IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Query: 621 NIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLG 680
+Y P +DH+SC+VDLLGR G LEEA LI+ ++ I +L +AC H N+++
Sbjct: 487 QVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIA 546
Query: 681 RMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
A L + + YV ++NI AAAG W+ A +R +M++ K PG S I
Sbjct: 547 EQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 145/575 (25%), Positives = 248/575 (43%), Gaps = 57/575 (9%)
Query: 34 NQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKA 93
N ESL LF ++ P+++T A A R A +HAH I++ +
Sbjct: 31 NDPVESLLLFREMKRG-GFEPNNFTFP--FVAKACARLADVGCC--EMVHAHLIKSPFWS 85
Query: 94 HSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMP 153
V + + ++ K + + F + D +W MLS + GH
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT----------- 134
Query: 154 NRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVEL-LDFG 212
D AF LFR+M+ + PD T +++ S E L
Sbjct: 135 ----------------------DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLL 172
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
+H+V IR G + +V N+ I+ Y CG + A VF ++ G R V++N+M
Sbjct: 173 EAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS 232
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTA 329
DAF ++ M + F P +TF+++ +SC +L G + +I G D
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIE 292
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
N ++MYS A+ +F+ M R VSW +MIS + ++ + A+ + M + G
Sbjct: 293 AINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSG 352
Query: 390 IEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIGLMK--VEVLNSLIAAYCRNGRINWA 444
+PD T SL+ G SL+ + + + G + V + N+LI Y + G I+ A
Sbjct: 353 EKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEA 412
Query: 445 LQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXX 504
IF N P K++++W T+I+G+ NG L+ L+ FS +++ KPN
Sbjct: 413 RDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHS 472
Query: 505 XXXXHGKQVHGYILRHGFSSEISLGN--ALVTMYAKCGSLDGSLGVFNAM-VKRDTISWN 561
G + + +I++ ++ L + +V + + G L+ +L + M K D W
Sbjct: 473 GSLEKGWE-YFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWG 531
Query: 562 ALISAYAQH------GQGKEAVCCFEAMQISPGIE 590
AL++A H Q E++ E +P +E
Sbjct: 532 ALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVE 566
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 173/566 (30%), Positives = 268/566 (47%), Gaps = 47/566 (8%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITM--YFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDG 270
+ H +IR+G + + L M + + A +VF E+ + +N +I
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP--NSFAWNTLIRA 104
Query: 271 LVRVDRNEDAFVMFRDM--QKACFSPMEATF---VSVMSSCSSLRVGCQAQAQSIKTGFD 325
+ F DM + C+ P + TF + + SSL +G ++K+
Sbjct: 105 YASGPDPVLSIWAFLDMVSESQCY-PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163
Query: 326 AYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKM 385
+ V N+ + Y G ++ A +F ++E+D+VSWN MI+ F Q+ + A+ + KM
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 386 RRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEV----LNSLIAAYCRNGRI 441
++ T +L A ++ +E + S I +V V N+++ Y + G I
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 442 N----------------W---------------ALQIFSNLPYKSLISWNTIISGFLTNG 470
W A ++ +++P K +++WN +IS + NG
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 471 CPLQGLEQFSAL-LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG 529
P + L F L L +K N G+ +H YI +HG +
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
+AL+ MY+KCG L+ S VFN++ KRD W+A+I A HG G EAV F MQ +
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ-EANV 462
Query: 590 EPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
+P+ TFT V ACSH GLVD+ +F M + YG VP H++CIVD+LGRSGYLE+A
Sbjct: 463 KPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAV 522
Query: 650 RLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAG 709
+ I+ ++++ +L AC H NL L M LLE + N +VLLSNI A G
Sbjct: 523 KFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLG 582
Query: 710 QWEEAANLRDMMREFGTTKQPGCSWI 735
+WE + LR MR G K+PGCS I
Sbjct: 583 KWENVSELRKHMRVTGLKKEPGCSSI 608
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 39/390 (10%)
Query: 300 VSVMSSCSSLRVGCQAQAQSIKTGF--DAYTAVNNATMTMYSCFGKVNEAQNIFERMEER 357
+S++ C SLR Q I+TG D Y+A M S F + A+ +F+ + +
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKM-RRVGIEPDEFTYGSLLGAS---DSLQVVEMV 413
+ +WN +I + +I +L M P+++T+ L+ A+ SL + + +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 414 HSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCP 472
H + K + V V NSLI Y G ++ A ++F+ + K ++SWN++I+GF+ G P
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 473 LQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNAL 532
+ LE F + + +K + G+QV YI + + ++L NA+
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 533 VTMYAKCGS----------------------LDG---------SLGVFNAMVKRDTISWN 561
+ MY KCGS LDG + V N+M ++D ++WN
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 562 ALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVN 621
ALISAY Q+G+ EA+ F +Q+ ++ + T LSAC+ VG ++ G R +
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIK 392
Query: 622 IYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
+G + S ++ + + G LE++ +
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 127/551 (23%), Positives = 240/551 (43%), Gaps = 77/551 (13%)
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
Q H H IRTG + + A+ L ++ A + +FA +EY
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALS--------SFASLEY----------------- 82
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDM-QKIGVRPDGYTFTS 199
A K+FD++P + N WN +I R A ++ F DM + P+ YTF
Sbjct: 83 ----ARKVFDEIP-KPNSFAWNTLI-RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPF 136
Query: 200 MLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
++ + V L G+ +H + ++S + V NSLI YF+CG + A +VF ++
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE-- 194
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQA 315
+D V++N+MI+G V+ + A +F+ M+ T V V+S+C+ +R G Q
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE------------------- 356
+ + + + NA + MY+ G + +A+ +F+ MEE
Sbjct: 255 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 314
Query: 357 ------------RDLVSWNIMISMFFQENLNETAILTYLKMR-RVGIEPDEFTYGSLLGA 403
+D+V+WN +IS + Q A++ + +++ + ++ ++ T S L A
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 404 SDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISW 459
+ +E+ +HS + K G+ M V ++LI Y + G + + ++F+++ + + W
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 434
Query: 460 NTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQV-HGYIL 518
+ +I G +GC + ++ F + +KPN + + H
Sbjct: 435 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
Query: 519 RHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEA- 576
+G E +V + + G L+ ++ AM + T W AL+ A H A
Sbjct: 495 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554
Query: 577 VCCFEAMQISP 587
+ C +++ P
Sbjct: 555 MACTRLLELEP 565
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 152/310 (49%), Gaps = 13/310 (4%)
Query: 13 TTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPA 72
TTI + ++ N ++ + ++L+LF ++ S ++ H T+ ++A A R
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIR-- 246
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
FG Q+ ++ + + +AN++L +Y K + +R F +E D+ +WTTM
Sbjct: 247 --NLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 304
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQ-KIGVR 191
L A ++ + MP + VA WNA+I+ NG + A +F ++Q + ++
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVA-WNALIS-AYEQNGKPNEALIVFHELQLQKNMK 362
Query: 192 PDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
+ T S LS C+ V L+ GR +HS + + G V ++LI MY CG + + +V
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR 310
F VE RD ++AMI GL +A MF MQ+A P TF +V +CS
Sbjct: 423 FNSVEK--RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS--H 478
Query: 311 VGCQAQAQSI 320
G +A+S+
Sbjct: 479 TGLVDEAESL 488
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 198/478 (41%), Gaps = 84/478 (17%)
Query: 39 SLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVA 98
S+ F + S P+ YT I A+A ++ + G LH A+++ + + VA
Sbjct: 114 SIWAFLDMVSESQCYPNKYTFPFLIKAAAEV----SSLSLGQSLHGMAVKSAVGSDVFVA 169
Query: 99 NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNV 158
NSL+ Y DL S + F I+ D SW +M++ + G AL
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL------------ 217
Query: 159 AVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHS 217
+LF+ M+ V+ T +LS C+ + L+FGR V S
Sbjct: 218 ---------------------ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 218 VVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRN 277
+ + ++ N+++ MY CG + DA ++F +E +D+VT+ M+DG +
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE--KDNVTWTTMLDGYAISEDY 314
Query: 278 E-------------------------------DAFVMFRDMQ-KACFSPMEATFVSVMSS 305
E +A ++F ++Q + + T VS +S+
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 306 CS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSW 362
C+ +L +G + K G V +A + MYS G + +++ +F +E+RD+ W
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 434
Query: 363 NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE----MVHSLLS 418
+ MI A+ + KM+ ++P+ T+ ++ A +V+ + H + S
Sbjct: 435 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
Query: 419 KIGLMKVEV-LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
G++ E ++ R+G + A++ +P I +T + G L C +
Sbjct: 495 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP----IPPSTSVWGALLGACKIHA 548
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 167/554 (30%), Positives = 272/554 (49%), Gaps = 16/554 (2%)
Query: 192 PDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
P+ ++S CS L + + + +I L ++N ++T V
Sbjct: 4 PEKSVLLELISRCSS--LRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVI 61
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SS 308
+ +YN ++ D+ ++ FSP TF V +C S
Sbjct: 62 LHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSG 121
Query: 309 LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISM 368
+R G Q K GF V N+ + Y G+ A +F M RD+VSW +I+
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVVEMVHSL-LSKIGLMK 424
F + L + A+ T+ KM +EP+ TY +L G L + + +H L L + L+
Sbjct: 182 FTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS 238
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL-L 483
+E N+LI Y + +++ A+++F L K +SWN++ISG + + ++ FS +
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 484 NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLD 543
++ +KP+ + HG+ VH YIL G + +G A+V MYAKCG ++
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 544 GSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
+L +FN + ++ +WNAL+ A HG G E++ FE M + G +P+ TF L+AC
Sbjct: 359 TALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM-VKLGFKPNLVTFLAALNAC 417
Query: 604 SHVGLVDDGTRIF-DMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSN 662
H GLVD+G R F M Y P ++H+ C++DLL R+G L+EA L+K +
Sbjct: 418 CHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVR 477
Query: 663 ICWSLFSACAAHGNL-RLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMM 721
IC ++ SAC G L L + + L+ + + VYVLLSNI AA +W++ A +R +M
Sbjct: 478 ICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLM 537
Query: 722 REFGTTKQPGCSWI 735
+ G +K PG S+I
Sbjct: 538 KVKGISKVPGSSYI 551
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 176/392 (44%), Gaps = 13/392 (3%)
Query: 292 FSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIF 351
+ P ++ + ++S CSSLRV Q Q Q I + N +T ++
Sbjct: 2 YLPEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVI 61
Query: 352 ERMEERDL--VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQV 409
L S+N ++S + + I Y G PD FT+ + A
Sbjct: 62 LHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSG 121
Query: 410 V---EMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISG 465
+ + +H +++K+G + V NSL+ Y G A ++F +P + ++SW II+G
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 466 FLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSE 525
F G + L+ FS + ++PN GK +HG IL+
Sbjct: 182 FTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS 238
Query: 526 ISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQI 585
+ GNAL+ MY KC L ++ VF + K+D +SWN++IS + KEA+ F MQ
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYL 645
S GI+PD T VLSAC+ +G VD G + + ++ G + IVD+ + GY+
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYI 357
Query: 646 EEAERLIKGGYFGANSNICW-SLFSACAAHGN 676
E A + G + + W +L A HG+
Sbjct: 358 ETALEIFNG--IRSKNVFTWNALLGGLAIHGH 387
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 156/385 (40%), Gaps = 84/385 (21%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
++ TR+ + E+L F+++ + P+ T + +S + G +H
Sbjct: 178 IITGFTRTGLYKEALDTFSKMD----VEPNLATYVCVLVSSGRV----GCLSLGKGIHGL 229
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
++ N+L+ +Y K E L+ R F E+E D SW +M+S +A
Sbjct: 230 ILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEA 289
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC- 204
+ LF M S G++PDG+ TS+LS C
Sbjct: 290 IDLFSLMQTSS--------------------------------GIKPDGHILTSVLSACA 317
Query: 205 SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTY 264
S+ +D GR VH ++ +G T + +++ MY CG + A ++F + + ++ T+
Sbjct: 318 SLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS--KNVFTW 375
Query: 265 NAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGF 324
NA++ GL ++ F +M K F P TF++ +++C C
Sbjct: 376 NALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNAC------CHT--------- 420
Query: 325 DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERD------LVSWNIMISMFFQENLNETA 378
G V+E + F +M+ R+ L + MI + + L + A
Sbjct: 421 -----------------GLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEA 463
Query: 379 ILTYLKMRRVGIEPDEFTYGSLLGA 403
+ ++ + ++PD G++L A
Sbjct: 464 LEL---VKAMPVKPDVRICGAILSA 485
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 38/192 (19%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N +++ L + E++ LF+ + +S ++PD + L++ ++A A + A G +H
Sbjct: 274 NSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACA----SLGAVDHGRWVH 329
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+ + G+K +H+ +++ +YAK G++
Sbjct: 330 EYILTAGIKWDTHIGTAIVDMYAKC-------------------------------GYIE 358
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML-S 202
AL++F+ + ++ NV WNA++ A +GH + F +M K+G +P+ TF + L +
Sbjct: 359 TALEIFNGIRSK-NVFTWNALLGGL-AIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNA 416
Query: 203 LCSVELLDFGRH 214
C L+D GR
Sbjct: 417 CCHTGLVDEGRR 428
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 230/421 (54%), Gaps = 7/421 (1%)
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
I+ + + N + YS G V A+ +F+ M ER LVSWN MI ++ + + A+
Sbjct: 88 IRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEAL 147
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGAS----DSLQVVEMVHSLLSKIGL-MKVEVLNSLIAA 434
+L+MR G + EFT S+L A D+L+ ++ H L K + + + V +L+
Sbjct: 148 DIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL-HCLSVKTCIDLNLYVGTALLDL 206
Query: 435 YCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXX 494
Y + G I A+Q+F ++ KS ++W+++++G++ N + L + L+ N +
Sbjct: 207 YAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTL 266
Query: 495 XXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK 554
GKQ+H I + GF S + + ++ V MYAKCGSL S +F+ + +
Sbjct: 267 SSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE 326
Query: 555 RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTR 614
++ WN +IS +A+H + KE + FE MQ G+ P+ TF+ +LS C H GLV++G R
Sbjct: 327 KNLELWNTIISGFAKHARPKEVMILFEKMQ-QDGMHPNEVTFSSLLSVCGHTGLVEEGRR 385
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAH 674
F +M YG P+V H+SC+VD+LGR+G L EA LIK F ++I SL ++C +
Sbjct: 386 FFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVY 445
Query: 675 GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
NL L + A L E + N +VLLSNI AA QWEE A R ++R+ K G SW
Sbjct: 446 KNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSW 505
Query: 735 I 735
I
Sbjct: 506 I 506
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 152/288 (52%), Gaps = 14/288 (4%)
Query: 131 TMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAII---TRCGADNGHDDVAFDLFRDMQK 187
+++A ++ G V A ++FD M RS V+ WN +I TR N + A D+F +M+
Sbjct: 101 VLINAYSKCGFVELARQVFDGMLERSLVS-WNTMIGLYTR----NRMESEALDIFLEMRN 155
Query: 188 IGVRPDGYTFTSMLSLCSVELLDFG-RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
G + +T +S+LS C V + +H + +++ V +L+ +Y CG + D
Sbjct: 156 EGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKD 215
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC 306
A QVF ++ + VT+++M+ G V+ E+A +++R Q+ + T SV+ +C
Sbjct: 216 AVQVFESMQD--KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
Query: 307 SSLRV---GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
S+L G Q A K+GF + V ++ + MY+ G + E+ IF ++E++L WN
Sbjct: 274 SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWN 333
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE 411
+IS F + + ++ + KM++ G+ P+E T+ SLL +VE
Sbjct: 334 TIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVE 381
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 17/290 (5%)
Query: 212 GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF-GEVEAGLRDHVTYNAMIDG 270
+ H +IR +++N LI Y CG V A QVF G +E L V++N MI
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL---VSWNTMIGL 136
Query: 271 LVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQA------QAQSIKTGF 324
R +A +F +M+ F E T SV+S+C V C A S+KT
Sbjct: 137 YTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG---VNCDALECKKLHCLSVKTCI 193
Query: 325 DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLK 384
D V A + +Y+ G + +A +FE M+++ V+W+ M++ + Q E A+L Y +
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 385 MRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGL-MKVEVLNSLIAAYCRNGR 440
+R+ +E ++FT S++ A +L + + +H+++ K G V V +S + Y + G
Sbjct: 254 AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGS 313
Query: 441 INWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
+ + IFS + K+L WNTIISGF + P + + F + + PN
Sbjct: 314 LRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 509 HGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYA 568
K HG I+R +++L N L+ Y+KCG ++ + VF+ M++R +SWN +I Y
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 138
Query: 569 QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPS 628
++ EA+ F M+ + G + T + VLSAC G+ D +
Sbjct: 139 RNRMESEALDIFLEMR-NEGFKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKTCID 194
Query: 629 VDHF--SCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGN-----LRLGR 681
++ + + ++DL + G +++A ++ + S++ WS A L L R
Sbjct: 195 LNLYVGTALLDLYAKCGMIKDAVQVFES--MQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 682 MVARLLLEKDHNNPSVYVLLSNICAAA 708
R+ LE++ + L S ICA +
Sbjct: 253 RAQRMSLEQNQ-----FTLSSVICACS 274
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 104/232 (44%), Gaps = 42/232 (18%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
++A ++ + E+L L+ + +L + +TLS+ I A +N A G Q+HA
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQR-MSLEQNQFTLSSVICACSNL----AALIEGKQMHAV 288
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
++G ++ VA+S + +YAK L F+E++ + W T++S + +
Sbjct: 289 ICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEV 348
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
+ LF++ MQ+ G+ P+ TF+S+LS+C
Sbjct: 349 MILFEK---------------------------------MQQDGMHPNEVTFSSLLSVCG 375
Query: 206 -VELLDFGRHVHSVVIRSGFLARTSVVN--SLITMYFNCGCVVDAYQVFGEV 254
L++ GR ++R+ + +VV+ ++ + G + +AY++ +
Sbjct: 376 HTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 281/558 (50%), Gaps = 30/558 (5%)
Query: 197 FTSMLSLCSVE--LLDFGRHVHSVVIRSGFLARTSVV--NSLITMYFNCGCVVDAYQVFG 252
+ ++ C+ + LLD G ++H ++ + +V+ N LI MY CG ++ A QVF
Sbjct: 62 YAALFQACAEQRNLLD-GINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVG 312
+ R+ V++ A+I G V+ ++ F +F M CF P E T SV++SC G
Sbjct: 121 TMPE--RNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR-YEPG 176
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYS-CF--GKVNEAQNIFERMEERDLVSWNIMISMF 369
Q ++K G V NA ++MY C EA +FE ++ ++LV+WN MI+ F
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 370 FQENLNETAILTYLKMRRVGIEPDEFTY----GSLLGASDSL-----QVVEMVHSLLSKI 420
NL + AI +++M G+ D T SL +SD + + +HSL K
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKS 296
Query: 421 GLM-KVEVLNSLIAAYCRN-GRINWALQIFSNLPY-KSLISWNTIISGFLTNGCPLQGLE 477
GL+ + EV +LI Y ++F + + + +++WN II+ F P + +
Sbjct: 297 GLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIH 355
Query: 478 QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYA 537
F L L P+ Y H +H +++ GF ++ L N+L+ YA
Sbjct: 356 LFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYA 415
Query: 538 KCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFT 597
KCGSLD + VF+ M RD +SWN+++ AY+ HGQ + F+ M I+P D ATF
Sbjct: 416 KCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINP----DSATFI 471
Query: 598 IVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYF 657
+LSACSH G V++G RIF M +P ++H++C++D+L R+ EAE +IK
Sbjct: 472 ALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPM 531
Query: 658 GANSNICWSLFSACAAHGNLRLGRMVARLLLE-KDHNNPSVYVLLSNICAAAGQWEEAAN 716
++ + +L +C HGN RLG++ A L E + N Y+ +SNI A G + EA
Sbjct: 532 DPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANL 591
Query: 717 LRDMMREFGTTKQPGCSW 734
M + K+P SW
Sbjct: 592 SIKEMETWRVRKEPDLSW 609
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 174/358 (48%), Gaps = 29/358 (8%)
Query: 132 MLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR 191
+++ + G++ A ++FD MP R NV W A+IT G++ F LF M
Sbjct: 102 LINMYAKCGNILYARQVFDTMPER-NVVSWTALITG-YVQAGNEQEGFCLFSSMLS-HCF 158
Query: 192 PDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
P+ +T +S+L+ C E G+ VH + ++ G V N++I+MY C AY+ +
Sbjct: 159 PNEFTLSSVLTSCRYEP---GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAW 215
Query: 252 GEVEA-GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL- 309
EA ++ VT+N+MI + + A +F M AT +++ CSSL
Sbjct: 216 TVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI---CSSLY 272
Query: 310 -----------RVGCQAQAQSIKTGFDAYTAVNNATMTMYS-CFGKVNEAQNIFERMEE- 356
+ Q + ++K+G T V A + +YS + +F M
Sbjct: 273 KSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHC 332
Query: 357 RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---V 413
RD+V+WN +I+ F + E AI + ++R+ + PD +T+ S+L A L +
Sbjct: 333 RDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSI 391
Query: 414 HSLLSKIGLMKVEVL-NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNG 470
H+ + K G + VL NSLI AY + G ++ +++F ++ + ++SWN+++ + +G
Sbjct: 392 HAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 167/366 (45%), Gaps = 66/366 (18%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHT--LRPDHYTLSTAITASANTRPA 72
I + ++ N ++A N +++ +F ++HS R + +++ S++ P
Sbjct: 221 IKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPN 280
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
+ QLH+ +++GL + VA +L+ +Y+ E +DY+
Sbjct: 281 EVSKC-CLQLHSLTVKSGLVTQTEVATALIKVYS---------------EMLEDYT---- 320
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
D KLF +M + ++ WN IIT + + A LF +++ + P
Sbjct: 321 -----------DCYKLFMEMSHCRDIVAWNGIITAFAVYD--PERAIHLFGQLRQEKLSP 367
Query: 193 DGYTFTSMLSLCSVELLDFGRH---VHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ 249
D YTF+S+L C+ L RH +H+ VI+ GFLA T + NSLI Y CG + +
Sbjct: 368 DWYTFSSVLKACAG--LVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMR 425
Query: 250 VFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
VF ++++ RD V++N+M+ + + +F+ M +P ATF++++S+CS
Sbjct: 426 VFDDMDS--RDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACS-- 478
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTM-----YSCF-------GKVNEAQNIFERME-E 356
A ++ G + ++ T+ Y+C + EA+ + ++M +
Sbjct: 479 ------HAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMD 532
Query: 357 RDLVSW 362
D V W
Sbjct: 533 PDAVVW 538
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 280/570 (49%), Gaps = 79/570 (13%)
Query: 242 GCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
G + A QVF + D V +N M+ R+ +++A +F ++ + P + +F +
Sbjct: 18 GRIASARQVFDGMPE--LDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 302 VMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYS---------------CFGK 343
++S+C+SL + G + Q+ I++GF A VNN+ + MY C
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 344 VNE------------------AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKM 385
NE A ++F M +R +WNIMIS E+ + + +M
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 386 RRVGIEPDEFTYGSLLGA--SDSLQVV--EMVHSLLSKIG-------------------- 421
+PD +T+ SL+ A +DS VV MVH+++ K G
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 422 -------LMKVEVL-----NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
L +EVL NS+I A + G AL++F P K++++W T+I+G+ N
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG 529
G Q L F ++ + + + + HGK +HG ++ GF +G
Sbjct: 316 GDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVG 375
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
NALV +YAKCG + + F + +D +SWN ++ A+ HG +A+ ++ M I+ GI
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNM-IASGI 434
Query: 590 EPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
+PD+ TF +L+ CSH GLV++G IF+ MV Y VDH +C++D+ GR G+L EA+
Sbjct: 435 KPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAK 494
Query: 650 RL---IKGGYFGANSNICW-SLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNIC 705
L +++N W +L AC+ H + LGR V+++L + + +VLLSN+
Sbjct: 495 DLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLY 554
Query: 706 AAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ G+W+E ++R M E G K PGCSWI
Sbjct: 555 CSTGRWKEGEDVRREMVERGMKKTPGCSWI 584
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 224/488 (45%), Gaps = 57/488 (11%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N +L + +R H E++ LFTQ+ S +PD Y+ TA +T + FG ++
Sbjct: 39 NTMLTSYSRLGLHQEAIALFTQLRFSDA-KPDDYSF----TAILSTCASLGNVKFGRKIQ 93
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEI--EYPDDYSWTTMLSASTRLGH 141
+ IR+G A V NSL+ +Y K D S + F ++ + ++ +W ++L A
Sbjct: 94 SLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQ 153
Query: 142 VGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML 201
AL +F +MP R A WN +I+ A G + LF++M + +PD YTF+S++
Sbjct: 154 FEAALDVFVEMPKRVAFA-WNIMISG-HAHCGKLESCLSLFKEMLESEFKPDCYTFSSLM 211
Query: 202 SLCSVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGC---------------- 243
+ CS + + +GR VH+V++++G+ + NS+++ Y G
Sbjct: 212 NACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQ 271
Query: 244 -----VVDAYQVFGEVEAGL--------RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
++DA GE E L ++ VT+ MI G R E A F +M K+
Sbjct: 272 VSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKS 331
Query: 291 CFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
+ +V+ +CS L + G I GF Y V NA + +Y+ G + EA
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 348 QNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
F + +DLVSWN M+ F L + A+ Y M GI+PD T+ LL
Sbjct: 392 DRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Query: 408 QVVE---MVHSLLSKIGLMKVEV--LNSLIAAYCRNGRINWALQIFSNLPYKSLI----- 457
+VE M+ + K + +EV + +I + R G + A + + Y SL+
Sbjct: 452 GLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATT--YSSLVTDSSN 509
Query: 458 --SWNTII 463
SW T++
Sbjct: 510 NSSWETLL 517
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 200/432 (46%), Gaps = 73/432 (16%)
Query: 130 TTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG 189
T+ +++ + G + A ++FD MP VA WN ++T H + A LF ++
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVA-WNTMLTSYSRLGLHQE-AIALFTQLRFSD 65
Query: 190 VRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAY 248
+PD Y+FT++LS C S+ + FGR + S+VIRSGF A V NSLI MY C + A
Sbjct: 66 AKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 249 QVFGEVEAGLRDHVT-------------------------------YNAMIDGLVRVDRN 277
+VF ++ R+ VT +N MI G +
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 278 EDAFVMFRDMQKACFSPMEATFVSVMSSCSS----LRVGCQAQAQSIKTGFDAYTAVNNA 333
E +F++M ++ F P TF S+M++CS+ + G A +K G+ + N+
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNS 245
Query: 334 TMTMYSCFGKVNEAQNIFERME-------------------------------ERDLVSW 362
++ Y+ G ++A E +E E+++V+W
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 363 NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSK 419
MI+ + + E A+ +++M + G++ D F YG++L A L ++ +M+H L
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 420 IGLMKVE-VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQ 478
G V N+L+ Y + G I A + F ++ K L+SWNT++ F +G Q L+
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 479 FSALLNTPLKPN 490
+ ++ + +KP+
Sbjct: 426 YDNMIASGIKPD 437
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
L S IA+ ++GRI A Q+F +P ++WNT+++ + G + + F+ L +
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG------- 540
KP+ Y G+++ ++R GF + + + N+L+ MY KC
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 541 --------------------------SLDGSLGVFNAMVKRDTISWNALISAYAQHGQGK 574
+ +L VF M KR +WN +IS +A G+ +
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 575 EAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIY----GFVPSVD 630
+ F+ M + +PD TF+ +++ACS D ++ MV+ G+ +V+
Sbjct: 187 SCLSLFKEM-LESEFKPDCYTFSSLMNACS----ADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 631 HFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SLFSACAAHGNLRLGRMVARLLLE 689
+ ++ + G ++A R ++ + + W S+ AC G V L E
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELES--IEVLTQVSWNSIIDACMKIGETEKALEVFHLAPE 299
Query: 690 KD 691
K+
Sbjct: 300 KN 301
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 184/607 (30%), Positives = 288/607 (47%), Gaps = 86/607 (14%)
Query: 213 RHVHSVVIRSGFLART-SVVNSLITMYFNCGCVVDAYQVFGEVE-AGLRDHVTYNAMIDG 270
R VH+ V+ S F+ R+ S+ +LI++Y G ++DA VF V L D +N+++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 271 LVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL-RVG-CQA-QAQSIKTGFDAY 327
V E+A ++R M++ + ++ +C L R G C+A Q I+ G
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKEN 192
Query: 328 TAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
V N +T+Y G++ +A N+F M R+ +SWN+MI F QE E+A+ + M+R
Sbjct: 193 LHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQR 252
Query: 388 VGIEPDEFTYGSLLGAS--------------------------------------DSLQV 409
+PDE T+ S+L ++L +
Sbjct: 253 EEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSI 312
Query: 410 VEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGF-- 466
E VH + K G + + N+LI Y + G++ A +F + K + SWN++I+ F
Sbjct: 313 AEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVD 372
Query: 467 --------------------------------LTNGCPLQG-----LEQFSALLNTPLKP 489
+ GC +QG LE F + + +
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Query: 490 NAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSL-DGSLGV 548
N+ G+++HG+++R S I + NALV MYAKCG L +GSL V
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSL-V 491
Query: 549 FNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGL 608
F A+ +D ISWN++I Y HG ++A+ F+ M IS G PD VLSACSH GL
Sbjct: 492 FEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM-ISSGFHPDGIALVAVLSACSHAGL 550
Query: 609 VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLF 668
V+ G IF M +G P +H++CIVDLLGR G+L+EA ++K + +L
Sbjct: 551 VEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALL 610
Query: 669 SACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTK 728
++C H N+ + +A L + Y+LLSNI +A G+WEE+AN+R + ++ K
Sbjct: 611 NSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKK 670
Query: 729 QPGCSWI 735
G SWI
Sbjct: 671 VSGSSWI 677
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 183/442 (41%), Gaps = 54/442 (12%)
Query: 82 LHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGH 141
H I+ GLK + HV N LL+LY KA + F E+ + SW M+ ++
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 142 VGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
A+K+F+ M + + W ++++ C + G + F M+ G G
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLS-CHSQCGKFEDVLKYFHLMRMSGNAVSGEALA 298
Query: 199 SMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE---- 253
S+C+ +E L VH VI+ GF N+LI +Y G V DA +F +
Sbjct: 299 VFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNK 358
Query: 254 ------------VEAGLRDH---------------------VTYNAMIDGLVRVDRNEDA 280
V+AG D VT+ ++I G R +D+
Sbjct: 359 GIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDS 418
Query: 281 FVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTM 337
FR MQ + T ++S C+ +L +G + I+T V NA + M
Sbjct: 419 LEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNM 478
Query: 338 YSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTY 397
Y+ G ++E +FE + ++DL+SWN +I + E A+ + +M G PD
Sbjct: 479 YAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIAL 538
Query: 398 GSLLGASDSLQVV----EMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLP 452
++L A +V E+ +S+ + GL + E ++ R G + A +I N+P
Sbjct: 539 VAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
Query: 453 YKSLISWNTIISGFLTNGCPLQ 474
+ + + G L N C +
Sbjct: 599 MEPKVC----VLGALLNSCRMH 616
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 11/241 (4%)
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A + ++H + I+ G + + N+L+ +Y K + E F +I SW ++++
Sbjct: 309 ALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLIT 368
Query: 135 ASTRLGHVGDALKLFDQMPN-------RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK 187
+ G + +AL LF ++ ++NV W ++I C DD + + FR MQ
Sbjct: 369 SFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD-SLEYFRQMQF 427
Query: 188 IGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
V + T +LS+C+ + L+ GR +H VIR+ V N+L+ MY CG + +
Sbjct: 428 SKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC 306
VF + +D +++N++I G E A MF M + F P V+V+S+C
Sbjct: 488 GSLVFEAIRD--KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSAC 545
Query: 307 S 307
S
Sbjct: 546 S 546
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 11/269 (4%)
Query: 397 YGSLLGASDSLQVVEMVHS--LLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPY- 453
+ LLG + Q VH+ LLS + +LI+ Y R G + A +F +
Sbjct: 59 FDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLV 118
Query: 454 --KSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGK 511
L WN+I+ +++G LE + + L + Y +
Sbjct: 119 LLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCR 178
Query: 512 QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHG 571
H +++ G + + N L+T+Y K G + + +F M R+ +SWN +I ++Q
Sbjct: 179 AFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEY 238
Query: 572 QGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDH 631
+ AV FE MQ +PD T+T VLS S G +D + F +M + G S +
Sbjct: 239 DCESAVKIFEWMQ-REEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM-RMSGNAVSGEA 296
Query: 632 FSCIVDLLGRSGYLEEAER----LIKGGY 656
+ + L AE+ +IKGG+
Sbjct: 297 LAVFFSVCAELEALSIAEKVHGYVIKGGF 325
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 40/215 (18%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHV 97
+SL+ F Q+ S L + T+ ++ A A G ++H H IRT + + V
Sbjct: 417 DSLEYFRQMQFSKVL-ANSVTICCILSICAEL----PALNLGREIHGHVIRTSMSENILV 471
Query: 98 ANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSN 157
N+L+++YAK L+ F I D SW +++ G AL +FD+M +
Sbjct: 472 QNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISS-- 529
Query: 158 VAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHV- 215
G PDG ++LS CS L++ GR +
Sbjct: 530 -------------------------------GFHPDGIALVAVLSACSHAGLVEKGREIF 558
Query: 216 HSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
+S+ R G + ++ + G + +A ++
Sbjct: 559 YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEI 593
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 255 bits (651), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 184/671 (27%), Positives = 317/671 (47%), Gaps = 77/671 (11%)
Query: 99 NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNV 158
NS +S +A+ +L E F ++ SW M+SA G + A ++FD+MP R
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 159 AVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-------------LCS 205
+ +NA+IT + A++LF D+ + + ++ +M++ L +
Sbjct: 114 S-YNAMITAMIKNKCDLGKAYELFCDIPE----KNAVSYATMITGFVRAGRFDEAEFLYA 168
Query: 206 VELLDFGRHVHSVVIRSGFL---------------ARTSVVN--SLITMYFNCGCVVDAY 248
+ F V S V+ SG+L A VV+ S++ Y G +VDA
Sbjct: 169 ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR 228
Query: 249 QVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM-SSCS 307
+F + R+ +T+ AMIDG + ED F +F M++ + + ++VM +C
Sbjct: 229 SLFDRMTE--RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 308 SL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
R G Q + + + N+ M+MYS G + EA+ +F M+ +D VSWN
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMK 424
+I+ Q Q+ E + L K+
Sbjct: 347 LITGLVQRK----------------------------------QISE-AYELFEKMPGKD 371
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
+ +I + G I+ +++F +P K I+W +IS F++NG + L F +L
Sbjct: 372 MVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQ 431
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
+ PN+Y G Q+HG +++ +++S+ N+LV+MY KCG+ +
Sbjct: 432 KEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTND 491
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+ +F+ + + + +S+N +IS Y+ +G GK+A+ F ++ S G EP+ TF +LSAC
Sbjct: 492 AYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLE-SSGKEPNGVTFLALLSACV 550
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNIC 664
HVG VD G + F M + Y P DH++C+VDLLGRSG L++A LI +S +
Sbjct: 551 HVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVW 610
Query: 665 WSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREF 724
SL SA H + L + A+ L+E + ++ + YV+LS + + G+ + + ++ +
Sbjct: 611 GSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSK 670
Query: 725 GTTKQPGCSWI 735
K PG SWI
Sbjct: 671 RIKKDPGSSWI 681
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 245/548 (44%), Gaps = 67/548 (12%)
Query: 88 RTGLKAHSHVA-NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDAL 146
T +K VA N LLS Y +A R F + + S ++M+ ++G + DA
Sbjct: 169 ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR 228
Query: 147 KLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG-VRPDGYTFTSMLSLCS 205
LFD+M R NV W A+I +D F LF M++ G V+ + T M C
Sbjct: 229 SLFDRMTER-NVITWTAMIDGYFKAGFFED-GFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 206 VELLDF-----GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRD 260
DF G +H +V R + NSL++MY G + +A VFG ++ +D
Sbjct: 287 ----DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN--KD 340
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSI 320
V++N++I GLV+ + +A+ +F M
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKM--------------------------------- 367
Query: 321 KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAIL 380
G D + + + +S G++++ +F M E+D ++W MIS F E A+
Sbjct: 368 -PGKDMVSWTD--MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALC 424
Query: 381 TYLKMRRVGIEPDEFTYGSLLGASDSL-QVVE--MVHSLLSKIGLMK-VEVLNSLIAAYC 436
+ KM + + P+ +T+ S+L A+ SL ++E +H + K+ ++ + V NSL++ YC
Sbjct: 425 WFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYC 484
Query: 437 RNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXX 496
+ G N A +IFS + +++S+NT+ISG+ NG + L+ FS L ++ +PN
Sbjct: 485 KCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLA 544
Query: 497 XXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN----ALVTMYAKCGSLDGSLGVFNAM 552
G + Y S I G +V + + G LD + + + M
Sbjct: 545 LLSACVHVGYVDLGWK---YFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Query: 553 -VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC-SHVGLVD 610
K + W +L+SA H + A + + +EPD AT +VLS S +G
Sbjct: 602 PCKPHSGVWGSLLSASKTHLRVDLAELAAKKL---IELEPDSATPYVVLSQLYSIIGKNR 658
Query: 611 DGTRIFDM 618
D RI ++
Sbjct: 659 DCDRIMNI 666
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 36/260 (13%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G+Q+H R L+ + NSL+S+Y+K + + F ++ D SW ++++ +
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Query: 139 LGHVGDALKLFDQMPNRSNVA------------------------------VWNAIITRC 168
+ +A +LF++MP + V+ W A+I+
Sbjct: 354 RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMIS-A 412
Query: 169 GADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLA 226
NG+ + A F M + V P+ YTF+S+LS + L D G +H V++ +
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS-ATASLADLIEGLQIHGRVVKMNIVN 471
Query: 227 RTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRD 286
SV NSL++MY CG DAY++F + + V+YN MI G + A +F
Sbjct: 472 DLSVQNSLVSMYCKCGNTNDAYKIFSCISEP--NIVSYNTMISGYSYNGFGKKALKLFSM 529
Query: 287 MQKACFSPMEATFVSVMSSC 306
++ + P TF++++S+C
Sbjct: 530 LESSGKEPNGVTFLALLSAC 549
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 192/688 (27%), Positives = 331/688 (48%), Gaps = 29/688 (4%)
Query: 66 SANTRPAATATTF--GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEY 123
+A R F G + AH I+ G+ + +AN+++S+Y L+ + F E+
Sbjct: 9 AAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE 68
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPNR----SNVAVWNAIITRCGADNGHDDVAF 179
+ +WTTM+S T G A++L+ +M + +N +++A++ CG G +
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGL-VGDIQLGI 127
Query: 180 DLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVV-NSLITMY 238
++ + K +R D S++ + + GR + + L +S N+LI+ Y
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDM----YVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 239 FNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNED-AFVMFRDMQKACFSPMEA 297
G + +A +F + + V++N +I G VD+ A MQ+
Sbjct: 184 CKAGLMDEAVTLFHRMPQ--PNVVSWNCLISGF--VDKGSPRALEFLVRMQREGLVLDGF 239
Query: 298 TFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIF--E 352
+ +CS L +G Q +K+G ++ +A + MYS G + A ++F E
Sbjct: 240 ALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQE 299
Query: 353 RMEERDLVS-WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASD---SLQ 408
++ V+ WN M+S F NE A+ L++ + + D +T L +L+
Sbjct: 300 KLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLR 359
Query: 409 VVEMVHSLLSKIGLMKVEVLNSLIAAYCRN-GRINWALQIFSNLPYKSLISWNTIISGFL 467
+ VHSL+ G ++ S++ N G I A ++F LP K +I+++ +I G +
Sbjct: 360 LGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV 419
Query: 468 TNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEIS 527
+G F L+ L + + GKQ+HG ++ G+ SE
Sbjct: 420 KSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV 479
Query: 528 LGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISP 587
ALV MY KCG +D + +F+ M++RD +SW +I + Q+G+ +EA F M I+
Sbjct: 480 TATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM-INI 538
Query: 588 GIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEE 647
GIEP+ TF +LSAC H GL+++ + M + YG P ++H+ C+VDLLG++G +E
Sbjct: 539 GIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQE 598
Query: 648 AERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAA 707
A LI + I SL +AC H N L ++A LL+ ++PSVY LSN A
Sbjct: 599 ANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYAT 658
Query: 708 AGQWEEAANLRDMMREFGTTKQPGCSWI 735
G W++ + +R+ ++ G K+ G SWI
Sbjct: 659 LGMWDQLSKVREAAKKLG-AKESGMSWI 685
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 190/672 (28%), Positives = 314/672 (46%), Gaps = 49/672 (7%)
Query: 109 EDLASVERAFAEIEYPDDYSWTTMLSA-STRLG---HVGDALKLFDQMPNRSNVAVWNAI 164
++L R+ + +D S T L A S LG + A ++F+ + ++N++
Sbjct: 46 DELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSL 105
Query: 165 ITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDF-GRHVHSVVIRSG 223
I R A +G + A LF M G+ PD YTF LS C+ G +H ++++ G
Sbjct: 106 I-RGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 224 FLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAF-V 282
+ V NSL+ Y CG + A +VF E+ R+ V++ +MI G R D +DA +
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSE--RNVVSWTSMICGYARRDFAKDAVDL 222
Query: 283 MFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYS 339
FR ++ +P T V V+S+C+ L G + A +G + + +A + MY
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 340 CFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGS 399
++ A+ +F+ +L N M S + ++ L A+ + M G+ PD + S
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 342
Query: 400 LLGASDSLQVV-----------------------------------EMVHSLLSKIGLMK 424
+ + L+ + + + ++
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
V NS++A Y NG ++ A + F +P K+++SWNTIISG + + +E F ++ +
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 485 TP-LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLD 543
+ + K ++ YI ++G ++ LG LV M+++CG +
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Query: 544 GSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
++ +FN++ RD +W A I A A G + A+ F+ M I G++PD F L+AC
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM-IEQGLKPDGVAFVGALTAC 581
Query: 604 SHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNI 663
SH GLV G IF M+ ++G P H+ C+VDLLGR+G LEEA +LI+ N I
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 664 CWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
SL +AC GN+ + A + YVLLSN+ A+AG+W + A +R M+E
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 724 FGTTKQPGCSWI 735
G K PG S I
Sbjct: 702 KGLRKPPGTSSI 713
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 190/672 (28%), Positives = 314/672 (46%), Gaps = 49/672 (7%)
Query: 109 EDLASVERAFAEIEYPDDYSWTTMLSA-STRLG---HVGDALKLFDQMPNRSNVAVWNAI 164
++L R+ + +D S T L A S LG + A ++F+ + ++N++
Sbjct: 46 DELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSL 105
Query: 165 ITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDF-GRHVHSVVIRSG 223
I R A +G + A LF M G+ PD YTF LS C+ G +H ++++ G
Sbjct: 106 I-RGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 224 FLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAF-V 282
+ V NSL+ Y CG + A +VF E+ R+ V++ +MI G R D +DA +
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSE--RNVVSWTSMICGYARRDFAKDAVDL 222
Query: 283 MFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYS 339
FR ++ +P T V V+S+C+ L G + A +G + + +A + MY
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 340 CFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGS 399
++ A+ +F+ +L N M S + ++ L A+ + M G+ PD + S
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 342
Query: 400 LLGASDSLQVV-----------------------------------EMVHSLLSKIGLMK 424
+ + L+ + + + ++
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
V NS++A Y NG ++ A + F +P K+++SWNTIISG + + +E F ++ +
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 485 TP-LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLD 543
+ + K ++ YI ++G ++ LG LV M+++CG +
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Query: 544 GSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
++ +FN++ RD +W A I A A G + A+ F+ M I G++PD F L+AC
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM-IEQGLKPDGVAFVGALTAC 581
Query: 604 SHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNI 663
SH GLV G IF M+ ++G P H+ C+VDLLGR+G LEEA +LI+ N I
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 664 CWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
SL +AC GN+ + A + YVLLSN+ A+AG+W + A +R M+E
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 724 FGTTKQPGCSWI 735
G K PG S I
Sbjct: 702 KGLRKPPGTSSI 713
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 246/445 (55%), Gaps = 7/445 (1%)
Query: 297 ATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE 356
++ ++ + SC S+ + + +K+ + + + + Y G A+ +F+ M E
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 357 RDLVSWNIMISMFFQENLNETA--ILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVE 411
RDLVSWN +IS + +L+ + + VG P+E T+ S++ A S +
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 412 MVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNG 470
+H L+ K G+++ V+V+N+ I Y + G + + ++F +L K+L+SWNT+I L NG
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214
Query: 471 CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN 530
+GL F+ +P+ + +HG I+ GFS +
Sbjct: 215 LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITT 274
Query: 531 ALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIE 590
AL+ +Y+K G L+ S VF+ + D+++W A+++AYA HG G++A+ FE M + GI
Sbjct: 275 ALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM-VHYGIS 333
Query: 591 PDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAER 650
PDH TFT +L+ACSH GLV++G F+ M Y P +DH+SC+VDLLGRSG L++A
Sbjct: 334 PDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYG 393
Query: 651 LIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQ 710
LIK +S + +L AC + + +LG A L E + + YV+LSNI +A+G
Sbjct: 394 LIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGL 453
Query: 711 WEEAANLRDMMREFGTTKQPGCSWI 735
W++A+ +R++M++ G + GCS+I
Sbjct: 454 WKDASRIRNLMKQKGLVRASGCSYI 478
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 22/334 (6%)
Query: 93 AHSHVANSLLSLYAKAEDLASVE-------RAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
HS AN + SL A + S+E + + Y + ++ RLGH A
Sbjct: 27 VHSLDAN-VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCA 85
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDM--QKIGVRPDGYTFTSMLSL 203
KLFD+MP R V+ WN++I+ + G+ F++ M ++G RP+ TF SM+S
Sbjct: 86 EKLFDEMPERDLVS-WNSLISGY-SGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISA 143
Query: 204 CSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
C + GR +H +V++ G L VVN+ I Y G + + ++F ++ +++ V
Sbjct: 144 CVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLS--IKNLV 201
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIK- 321
++N MI ++ E F ++ P +ATF++V+ SC + G AQ I
Sbjct: 202 SWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDM--GVVRLAQGIHG 259
Query: 322 ----TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
GF + A + +YS G++ ++ +F + D ++W M++ +
Sbjct: 260 LIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRD 319
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE 411
AI + M GI PD T+ LL A +VE
Sbjct: 320 AIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 249/464 (53%), Gaps = 10/464 (2%)
Query: 280 AFVMFRDMQKACFSPMEATFVSVMSSCSSLRVG--CQAQAQSIKTGFDAYTAVNNATMTM 337
+F+ +R M++ P TF ++ + LR Q A +K G D+ V N+ ++
Sbjct: 88 SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISG 147
Query: 338 YSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTY 397
YS G + A +F+ E++D+V+W MI F + A++ +++M++ G+ +E T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 398 GSLLGASDSLQVVEM---VHSLLSKIGLMKVEVL--NSLIAAYCRNGRINWALQIFSNLP 452
S+L A+ ++ V VH L + G +K +V +SL+ Y + + A ++F +P
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 453 YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQ 512
+++++W +I+G++ + C +G+ F +L + + PN G++
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 513 VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQ 572
VH Y++++ + G L+ +Y KCG L+ ++ VF + +++ +W A+I+ +A HG
Sbjct: 328 VHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGY 387
Query: 573 GKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHF 632
++A F M +S + P+ TF VLSAC+H GLV++G R+F M + P DH+
Sbjct: 388 ARDAFDLFYTM-LSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 633 SCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SLFSACAAHGNLRLGRMVARLLLEKD 691
+C+VDL GR G LEEA+ LI+ +N+ W +LF +C H + LG+ A +++
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPM-EPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQ 505
Query: 692 HNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
++ Y LL+N+ + + W+E A +R M++ K PG SWI
Sbjct: 506 PSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI 549
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 168/346 (48%), Gaps = 17/346 (4%)
Query: 157 NVAVWNAIITR-CGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLD---FG 212
++ +W+++I G + ++F +R M++ GV P +TF +L +L D F
Sbjct: 66 SIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLK-AVFKLRDSNPFQ 124
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
H H +++ G + V NSLI+ Y + G A ++F E +D VT+ AMIDG V
Sbjct: 125 FHAH--IVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAED--KDVVTWTAMIDGFV 180
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTG-FDAYT 328
R +A V F +M+K + E T VSV+ + +R G ++TG
Sbjct: 181 RNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDV 240
Query: 329 AVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRV 388
+ ++ + MY ++AQ +F+ M R++V+W +I+ + Q + +L + +M +
Sbjct: 241 FIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS 300
Query: 389 GIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWA 444
+ P+E T S+L A +L VH + K + + +LI Y + G + A
Sbjct: 301 DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 360
Query: 445 LQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
+ +F L K++ +W +I+GF +G + F +L++ + PN
Sbjct: 361 ILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN 406
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 4 CWFSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAI 63
C+ Q + S ++ L+A +S + + +F ++ S + P+ TLS+ +
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS-DVAPNEKTLSSVL 313
Query: 64 TASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEY 123
+A A+ A G ++H + I+ ++ ++ +L+ LY K L F +
Sbjct: 314 SACAHV----GALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE 369
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFD 180
+ Y+WT M++ G+ DA LF M + N + A+++ C A G +
Sbjct: 370 KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC-AHGGLVEEGRR 428
Query: 181 LFRDMQ-KIGVRPDGYTFTSMLSLCSVELLDFGR 213
LF M+ + + P + M+ L FGR
Sbjct: 429 LFLSMKGRFNMEPKADHYACMVDL-------FGR 455
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/602 (28%), Positives = 286/602 (47%), Gaps = 59/602 (9%)
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYT 196
+R+G + +A KLFD ++S ++ WN+++ A+ D A LF +M PD
Sbjct: 28 SRIGKIHEARKLFDSCDSKS-ISSWNSMVAGYFANLMPRD-ARKLFDEM------PD--- 76
Query: 197 FTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
R++ S N L++ Y G + +A +VF +
Sbjct: 77 ----------------RNIISW-------------NGLVSGYMKNGEIDEARKVFDLMPE 107
Query: 257 GLRDHVTYNAMIDGLV---RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC 313
R+ V++ A++ G V +VD E F + K ++ M F L+ G
Sbjct: 108 --RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGF---------LQDGR 156
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCF-GKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
A + + +M C G+V+EA+ IF+ M ER +++W M++ + Q
Sbjct: 157 IDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQN 216
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLI 432
N + A K+ V E E ++ S+L +E L + + V N++I
Sbjct: 217 NRVDDA----RKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMI 272
Query: 433 AAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAY 492
+ + G I A ++F ++ ++ SW T+I NG L+ L+ F + ++P
Sbjct: 273 SGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFP 332
Query: 493 XXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM 552
HGKQVH ++R F ++ + + L+TMY KCG L S +F+
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
Query: 553 VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDG 612
+D I WN++IS YA HG G+EA+ F M +S +P+ TF LSACS+ G+V++G
Sbjct: 393 PSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEG 452
Query: 613 TRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACA 672
+I++ M +++G P H++C+VD+LGR+G EA +I ++ + SL AC
Sbjct: 453 LKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACR 512
Query: 673 AHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGC 732
H L + A+ L+E + N Y+LLSN+ A+ G+W + A LR +M+ K PGC
Sbjct: 513 THSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGC 572
Query: 733 SW 734
SW
Sbjct: 573 SW 574
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 226/495 (45%), Gaps = 40/495 (8%)
Query: 122 EYPDD--YSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAF 179
E PD SW ++S + G + +A K+FD MP R NV W A++ + NG DVA
Sbjct: 73 EMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER-NVVSWTALV-KGYVHNGKVDVAE 130
Query: 180 DLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGR-----HVHSVVIRSGFLARTSVVNSL 234
LF M + + ++T ML + L GR ++ ++ +ARTS+++ L
Sbjct: 131 SLFWKMPE----KNKVSWTVML----IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGL 182
Query: 235 ITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSP 294
G V +A ++F E+ R +T+ M+ G + +R +DA +F M +
Sbjct: 183 CKE----GRVDEAREIFDEMSE--RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT--- 233
Query: 295 MEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVN-NATMTMYSCFGKVNEAQNIFER 353
E ++ S++ ++ G A+ + + NA ++ G++ +A+ +F+
Sbjct: 234 -EVSWTSML--MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDS 290
Query: 354 MEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV--- 410
M+ER+ SW +I + + A+ ++ M++ G+ P T S+L SL +
Sbjct: 291 MKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 411 EMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
+ VH+ L + + V V + L+ Y + G + + IF P K +I WN+IISG+ ++
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 470 GCPLQGLEQFSAL-LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEIS 527
G + L+ F + L+ KPN G +++ + G +
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 528 LGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQIS 586
+V M + G + ++ + ++M V+ D W +L+ A H Q A C + +
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLI-- 528
Query: 587 PGIEPDHATFTIVLS 601
IEP+++ I+LS
Sbjct: 529 -EIEPENSGTYILLS 542
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 151/359 (42%), Gaps = 59/359 (16%)
Query: 100 SLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVA 159
S+L Y + + E F + + M+S + G + A ++FD M R N A
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKER-NDA 297
Query: 160 VWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSV 218
W +I + NG + A DLF MQK GVRP T S+LS+C S+ L G+ VH+
Sbjct: 298 SWQTVI-KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 219 VIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNE 278
++R F V + L+TMY CG +V + +F + +D + +N++I G E
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS--KDIIMWNSIISGYASHGLGE 414
Query: 279 DAFVMFRDMQ-KACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTM 337
+A +F +M P E TFV+ +S+CS G + I ++ V T
Sbjct: 415 EALKVFCEMPLSGSTKPNEVTFVATLSACSY--AGMVEEGLKIYESMESVFGVKPIT-AH 471
Query: 338 YSCF-------GKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGI 390
Y+C G+ NEA + + M +
Sbjct: 472 YACMVDMLGRAGRFNEAMEMIDSM----------------------------------TV 497
Query: 391 EPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNS-----LIAAYCRNGRINWA 444
EPD +GSLLGA + +++ K L+++E NS L Y GR WA
Sbjct: 498 EPDAAVWGSLLGACRTHSQLDVAEFCAKK--LIEIEPENSGTYILLSNMYASQGR--WA 552
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 153/364 (42%), Gaps = 43/364 (11%)
Query: 332 NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIE 391
N +T S GK++EA+ +F+ + + + SWN M++ +F + A + +M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 392 PDE--FTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFS 449
PD ++ L+ ++ + + V +L+ Y NG+++ A +F
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFW 134
Query: 450 NLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXH 509
+P K+ +SW ++ GFL +G + + + P K N H
Sbjct: 135 KMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI---PDKDN-----------IARTSMIH 180
Query: 510 GKQVHGYI--LRHGFS--SEISL--GNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNAL 563
G G + R F SE S+ +VT Y + +D + +F+ M ++ +SW ++
Sbjct: 181 GLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSM 240
Query: 564 ISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIY 623
+ Y Q+G+ ++A FE M + P I ++S G + R+FD M
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVKPVI-----ACNAMISGLGQKGEIAKARRVFDSMKE-- 293
Query: 624 GFVPSVDHFSCIVDLLGRSGYLEEAERLI----KGGYFGANSNICWSLFSACAAHGNLRL 679
+ + ++ + R+G+ EA L K G + S+ S CA+ +L
Sbjct: 294 ---RNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI-SILSVCASLASLHH 349
Query: 680 GRMV 683
G+ V
Sbjct: 350 GKQV 353
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 11/177 (6%)
Query: 32 RSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGL 91
R+ E+L LF + +RP TL + ++ A + + G Q+HA +R
Sbjct: 308 RNGFELEALDLFI-LMQKQGVRPTFPTLISILSVCA----SLASLHHGKQVHAQLVRCQF 362
Query: 92 KAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQ 151
+VA+ L+++Y K +L + F D W +++S G +ALK+F +
Sbjct: 363 DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCE 422
Query: 152 MP----NRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI-GVRPDGYTFTSMLSL 203
MP + N + A ++ C G + ++ M+ + GV+P + M+ +
Sbjct: 423 MPLSGSTKPNEVTFVATLSACSY-AGMVEEGLKIYESMESVFGVKPITAHYACMVDM 478
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 254/527 (48%), Gaps = 40/527 (7%)
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM--- 303
A VF + + + + +N + L R + ++ ++ + +F+ ++
Sbjct: 63 ALNVFSSIPSP-PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 304 SSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
S S+L G + + K V M MY+ G++N A+N+F+ M RD+V+WN
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA------------------SD 405
MI + + L + A + +M+ + PDE +++ A +
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 406 SLQV-----------------VEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIF 448
+++ ++M K+ + + V ++++ Y + GR++ A IF
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 449 SNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXX 508
K L+ W T+IS ++ + P + L F + + +KP+
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 509 HGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYA 568
K VH I +G SE+S+ NAL+ MYAKCG LD + VF M +R+ +SW+++I+A +
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 569 QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPS 628
HG+ +A+ F M+ +EP+ TF VL CSH GLV++G +IF M + Y P
Sbjct: 422 MHGEASDALSLFARMK-QENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPK 480
Query: 629 VDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLL 688
++H+ C+VDL GR+ L EA +I+ +N I SL SAC HG L LG+ A+ +L
Sbjct: 481 LEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRIL 540
Query: 689 EKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
E + ++ VL+SNI A +WE+ N+R +M E K+ G S I
Sbjct: 541 ELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 234/498 (46%), Gaps = 39/498 (7%)
Query: 12 TTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRP 71
++ S + + N L L+RS++ ++ + +I R D ++ + A +
Sbjct: 68 SSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGG-RLDQFSFLPILKAVSKV-- 124
Query: 72 AATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTT 131
+A G +LH A + V + +YA + F E+ + D +W T
Sbjct: 125 --SALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 132 MLSASTRLGHVGDALKLFDQMPNRSNV----AVWNAIITRCGADNGHDDVAFDLFRDMQK 187
M+ R G V +A KLF++M + SNV + I++ CG G+ ++ + +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKD-SNVMPDEMILCNIVSACGR-TGNMRYNRAIYEFLIE 240
Query: 188 IGVRPDGYTFTSMLSL-CSVELLDFGRH-VHSVVIRSGFLARTSVVNSLITMYFNCGCVV 245
VR D + T+++++ +D R + +R+ F V ++++ Y CG +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF-----VSTAMVSGYSKCGRLD 295
Query: 246 DAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS 305
DA +F + E +D V + MI V D ++A +F +M + P + SV+S+
Sbjct: 296 DAQVIFDQTEK--KDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISA 353
Query: 306 CSSLRVGCQAQAQSIKT-----GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLV 360
C++L G +A+ + + G ++ ++NNA + MY+ G ++ +++FE+M R++V
Sbjct: 354 CANL--GILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411
Query: 361 SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTY-GSLLGASDSLQVVE---MVHSL 416
SW+ MI+ A+ + +M++ +EP+E T+ G L G S S V E + S+
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Query: 417 LSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
+ + K+E ++ + R + AL++ ++P S N +I G L + C + G
Sbjct: 472 TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS----NVVIWGSLMSACRIHG 527
Query: 476 ---LEQFSALLNTPLKPN 490
L +F+A L+P+
Sbjct: 528 ELELGKFAAKRILELEPD 545
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 214/403 (53%), Gaps = 9/403 (2%)
Query: 337 MYSCFGK---VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
M SC+ + +AQ+ F+RM +D SWN MI+ + + E A + M +E +
Sbjct: 130 MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKN 185
Query: 394 EFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPY 453
E ++ +++ +E + V ++I Y + ++ A +F ++
Sbjct: 186 EVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTV 245
Query: 454 -KSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQ 512
K+L++WN +ISG++ N P GL+ F A+L ++PN+ G+Q
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQ 305
Query: 513 VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQ 572
+H + + ++++ +L++MY KCG L + +F M K+D ++WNA+IS YAQHG
Sbjct: 306 IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGN 365
Query: 573 GKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHF 632
+A+C F M I I PD TF VL AC+H GLV+ G F+ MV Y P DH+
Sbjct: 366 ADKALCLFREM-IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 633 SCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDH 692
+C+VDLLGR+G LEEA +LI+ F ++ + +L AC H N+ L A LL+ +
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS 484
Query: 693 NNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
N + YV L+NI A+ +WE+ A +R M+E K PG SWI
Sbjct: 485 QNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 207/441 (46%), Gaps = 45/441 (10%)
Query: 69 TRPAATATTFG-NQLHAHAIRTG-----------LKAHSHVA-NSLLSLYAK-AEDLASV 114
T+P+ F N++ A +R+G ++A + + NSLL +K +
Sbjct: 53 TKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEA 112
Query: 115 ERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGH 174
+ F EI PD +S+ MLS R + A FD+MP + + A WN +IT A G
Sbjct: 113 HQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-DAASWNTMITGY-ARRGE 170
Query: 175 DDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGR--HVHSVVIRSGFLARTSVVN 232
+ A +LF M + + ++ +M+S +E D + H V G +A T+
Sbjct: 171 MEKARELFYSM----MEKNEVSWNAMIS-GYIECGDLEKASHFFKVAPVRGVVAWTA--- 222
Query: 233 SLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACF 292
+IT Y V A +F ++ ++ VT+NAMI G V R ED +FR M +
Sbjct: 223 -MITGYMKAKKVELAEAMFKDMTVN-KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 293 SPMEATFVSVMSSCS---SLRVGCQA-QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQ 348
P + S + CS +L++G Q Q S T + TA+ + ++MY G++ +A
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALT-SLISMYCKCGELGDAW 339
Query: 349 NIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ 408
+FE M+++D+V+WN MIS + Q + A+ + +M I PD T+ ++L A +
Sbjct: 340 KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Query: 409 VVEMVHSLL-SKIGLMKVEV----LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTII 463
+V + + S + KVE ++ R G++ AL++ ++P++ + +
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRP----HAAV 455
Query: 464 SGFLTNGCPLQG---LEQFSA 481
G L C + L +F+A
Sbjct: 456 FGTLLGACRVHKNVELAEFAA 476
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 162/393 (41%), Gaps = 50/393 (12%)
Query: 342 GKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL 401
G ++ A +F M ++ ++WN S+ + + + ++ ++ EPD F+Y +L
Sbjct: 75 GDIDGALRVFHGMRAKNTITWN---SLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIML 131
Query: 402 GASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNT 461
E S ++ N++I Y R G + A ++F ++ K+ +SWN
Sbjct: 132 SCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191
Query: 462 IISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG 521
+ISG++ G LE+ S V G +
Sbjct: 192 MISGYIECG----DLEKASHFFKVA-------------------------PVRGVV---- 218
Query: 522 FSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCF 580
A++T Y K ++ + +F M V ++ ++WNA+IS Y ++ + ++ + F
Sbjct: 219 ------AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 581 EAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLG 640
AM + GI P+ + + L CS + + G +I +V+ V + ++ +
Sbjct: 273 RAM-LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ-IVSKSTLCNDVTALTSLISMYC 330
Query: 641 RSGYLEEAERLIKGGYFGANSNICW-SLFSACAAHGNLRLGRMVARLLLE-KDHNNPSVY 698
+ G L +A +L + + W ++ S A HGN + R +++ K + +
Sbjct: 331 KCGELGDAWKLFE--VMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 699 VLLSNICAAAGQWEEA-ANLRDMMREFGTTKQP 730
V + C AG A M+R++ QP
Sbjct: 389 VAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 7/158 (4%)
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
LN +IA R+G I+ AL++F + K+ I+WN+++ G + P + +E P
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD--PSRMMEAHQLFDEIP- 120
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
+P+ + + ++ + R F S N ++T YA+ G ++ +
Sbjct: 121 EPDTF---SYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASW-NTMITGYARRGEMEKARE 176
Query: 548 VFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQI 585
+F +M++++ +SWNA+IS Y + G ++A F+ +
Sbjct: 177 LFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPV 214
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 118/305 (38%), Gaps = 72/305 (23%)
Query: 2 KKCWFSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLST 61
KK + M ++ ++ N +++ +++ + LKLF + +RP+ LS+
Sbjct: 231 KKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-LEEGIRPNSSGLSS 289
Query: 62 AITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEI 121
A+ + +A G Q+H ++ L SL+S+Y K +L + F +
Sbjct: 290 ALLGCSEL----SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 122 EYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDL 181
+ D +W M+S + G+ AL C L
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKAL---------------------C------------L 372
Query: 182 FRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNC 241
FR+M +RPD TF ++L C+ H+ ++ G YF
Sbjct: 373 FREMIDNKIRPDWITFVAVLLACN----------HAGLVNIGM------------AYFE- 409
Query: 242 GCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
+V Y+V + DH Y M+D L R + E+A + R M F P A F +
Sbjct: 410 -SMVRDYKVEPQP-----DH--YTCMVDLLGRAGKLEEALKLIRSMP---FRPHAAVFGT 458
Query: 302 VMSSC 306
++ +C
Sbjct: 459 LLGAC 463
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 178/598 (29%), Positives = 280/598 (46%), Gaps = 79/598 (13%)
Query: 145 ALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC 204
A+ +F + N+ +WN + R A + A L+ M +G+ P+ YTF +L C
Sbjct: 87 AISVFKTI-QEPNLLIWNTMF-RGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 144
Query: 205 SV-ELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
+ + G+ +H V++ GC +D Y
Sbjct: 145 AKSKAFKEGQQIHGHVLK-------------------LGCDLDLY--------------V 171
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTG 323
+ ++I V+ R EDA +F SP
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDK------SPHRDVV------------------------ 201
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
+YTA+ + Y+ G + AQ +F+ + +D+VSWN MIS + + + A+ +
Sbjct: 202 --SYTAL----IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 384 KMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNG 439
M + + PDE T +++ A S S+++ VH + G ++++N+LI Y + G
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 440 RINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
+ A +F LPYK +ISWNT+I G+ + L F +L + PN
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 500 XXXXXXXXXHGKQVHGYILRH--GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDT 557
G+ +H YI + G ++ SL +L+ MYAKCG ++ + VFN+++ +
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 558 ISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFD 617
SWNA+I +A HG+ + F M+ GI+PD TF +LSACSH G++D G IF
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMR-KIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494
Query: 618 MMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNL 677
M Y P ++H+ C++DLLG SG +EAE +I + I SL AC HGN+
Sbjct: 495 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554
Query: 678 RLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
LG A L++ + NP YVLLSNI A+AG+W E A R ++ + G K PGCS I
Sbjct: 555 ELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSI 612
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 202/398 (50%), Gaps = 19/398 (4%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAA 73
TI +L N + S+ +LKL+ + S L P+ YT + + A ++
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFVLKSCAKSK--- 148
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
A G Q+H H ++ G +V SL+S+Y + L + F + + D S+T ++
Sbjct: 149 -AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALI 207
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
G++ +A KLFD++P + +V WNA+I+ A+ G+ A +LF+DM K VRPD
Sbjct: 208 KGYASRGYIENAQKLFDEIPVK-DVVSWNAMISGY-AETGNYKEALELFKDMMKTNVRPD 265
Query: 194 GYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
T +++S C+ ++ GR VH + GF + +VN+LI +Y CG + A +F
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVG 312
+ +D +++N +I G ++ ++A ++F++M ++ +P + T +S++ +C+ L G
Sbjct: 326 RLP--YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL--G 381
Query: 313 CQAQAQSIKTGFDA-YTAVNNAT------MTMYSCFGKVNEAQNIFERMEERDLVSWNIM 365
+ I D V NA+ + MY+ G + A +F + + L SWN M
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 441
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
I F + + + +MR++GI+PD+ T+ LL A
Sbjct: 442 IFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 161/355 (45%), Gaps = 46/355 (12%)
Query: 399 SLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYC----RNGRINWALQIFSNLPYK 454
SLL +LQ + ++H+ + KIGL S + +C + +A+ +F +
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 455 SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVH 514
+L+ WNT+ G + P+ L+ + +++ L PN+Y G+Q+H
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 515 GYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFN-----------AMVK--------- 554
G++L+ G ++ + +L++MY + G L+ + VF+ A++K
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 555 -----------RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
+D +SWNA+IS YA+ G KEA+ F+ M + + PD +T V+SAC
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPDESTMVTVVSAC 276
Query: 604 SHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNI 663
+ G ++ G ++ + ++ +GF ++ + ++DL + G LE A L + I
Sbjct: 277 AQSGSIELGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE--RLPYKDVI 333
Query: 664 CWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAA-------GQW 711
W+ H NL ++ + + P+ +LS + A A G+W
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 249 bits (635), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 146/479 (30%), Positives = 247/479 (51%), Gaps = 8/479 (1%)
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSI 320
YN++I+G V + +F ++K TF V+ +C SS ++G + +
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 321 KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAIL 380
K GF+ A + +++YS G++N+A +F+ + +R +V+W + S + + AI
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 381 TYLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGLMKVE-VLNSLIAAYC 436
+ KM +G++PD + +L A L E + + ++ + K V +L+ Y
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 437 RNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXX 496
+ G++ A +F ++ K +++W+T+I G+ +N P +G+E F +L LKP+ +
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 497 XXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRD 556
G+ I RH F + + + NAL+ MYAKCG++ VF M ++D
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 557 TISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIF 616
+ NA IS A++G K + F + GI PD +TF +L C H GL+ DG R F
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTE-KLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437
Query: 617 DMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGN 676
+ + +Y +V+H+ C+VDL GR+G L++A RLI N+ + +L S C +
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKD 497
Query: 677 LRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+L V + L+ + N YV LSNI + G+W+EAA +RDMM + G K PG SWI
Sbjct: 498 TQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWI 556
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 213/488 (43%), Gaps = 36/488 (7%)
Query: 151 QMPNRSNVAVWNAIITRCGADNGH-DDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VEL 208
Q PN + ++N++I G N H DLF ++K G+ G+TF +L C+
Sbjct: 72 QFPN---IFLYNSLIN--GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 209 LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMI 268
G +HS+V++ GF + + SL+++Y G + DA+++F E+ R VT+ A+
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD--RSVVTWTALF 184
Query: 269 DGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR--------VGCQAQAQSI 320
G R+ +A +F+ M + P V V+S+C + V + +
Sbjct: 185 SGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ 244
Query: 321 KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAIL 380
K F T VN +Y+ GK+ +A+++F+ M E+D+V+W+ MI + + + I
Sbjct: 245 KNSFVRTTLVN-----LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 381 TYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIG----LMKVEVLNSLIAAYC 436
+L+M + ++PD+F+ L + SL +++ +S I L + + N+LI Y
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 437 RNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXX 496
+ G + ++F + K ++ N ISG NG F + P+
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 497 XXXXXXXXXXXXHGKQVHGYI-LRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
G + I + + +V ++ + G LD + + M R
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 556 -DTISWNALISA--YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV-GLVDD 611
+ I W AL+S + Q E V ++ +EP +A + LS V G D+
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETV-----LKELIALEPWNAGNYVQLSNIYSVGGRWDE 534
Query: 612 GTRIFDMM 619
+ DMM
Sbjct: 535 AAEVRDMM 542
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 165/388 (42%), Gaps = 59/388 (15%)
Query: 3 KCWFSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLS-- 60
KC F+ ++ T LL+ + S + ++ KLF +I PD ++
Sbjct: 139 KCGFNHDVAAMT----------SLLSIYSGSGRLNDAHKLFDEI-------PDRSVVTWT 181
Query: 61 ---TAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVE-- 115
+ T S R A L + G+K S+ +LS DL S E
Sbjct: 182 ALFSGYTTSGRHREAI-------DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 116 -RAFAEIEY-PDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNG 173
+ E+E + + TT+++ + G + A +FD M + ++ W+ +I + A N
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEK-DIVTWSTMI-QGYASNS 292
Query: 174 HDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVN 232
+LF M + ++PD ++ LS C S+ LD G S++ R FL + N
Sbjct: 293 FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMAN 352
Query: 233 SLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACF 292
+LI MY CG + ++VF E++ +D V NA I GL + + +F +F +K
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEMKE--KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 293 SPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVN-----NATMTMYSCF------ 341
SP +TF+ ++ C A I+ G + A++ T+ Y C
Sbjct: 411 SPDGSTFLGLLCGC--------VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGR 462
Query: 342 -GKVNEAQNIFERMEER-DLVSWNIMIS 367
G +++A + M R + + W ++S
Sbjct: 463 AGMLDDAYRLICDMPMRPNAIVWGALLS 490
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 194/727 (26%), Positives = 329/727 (45%), Gaps = 65/727 (8%)
Query: 18 EQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATT 77
+ ++ N +++ L ++ + +L LF + S + DH +L I A + +
Sbjct: 164 KDVVTWNTMVSGLAQNGCSSAALLLFHDMRSC-CVDIDHVSLYNLIPAVSKLEKSDVCRC 222
Query: 78 FGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAST 137
LH I+ G ++ L+ +Y DL + E F E+ D+ SW TM++A
Sbjct: 223 ----LHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYA 276
Query: 138 RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
G + L+LFD M N +D+ M K+
Sbjct: 277 HNGFFEEVLELFDLMRN------------------------YDV--RMNKVAAASALQAA 310
Query: 198 TSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
+ L G +H ++ G + SV SL++MY CG + A Q+F +E
Sbjct: 311 AYVGDLVK------GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED- 363
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQ 314
RD V+++AMI + ++++A +FRDM + P T SV+ C+ + R+G
Sbjct: 364 -RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS 422
Query: 315 AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENL 374
+IK ++ A ++MY+ G+ + A FER+ +D V++N + + Q
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLG----ASDSLQVVEMVHSLLSKIGL-MKVEVLN 429
A Y M+ G+ PD T +L SD + V+ + K G + V +
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG-SCVYGQIIKHGFDSECHVAH 541
Query: 430 SLIAAYCRNGRINWALQIFSNLPY-KSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
+LI + + + A+ +F + KS +SWN +++G+L +G + + F + +
Sbjct: 542 ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQ 601
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
PNA G VH +++ GF S+ +GN+LV MYAKCG ++ S
Sbjct: 602 PNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKC 661
Query: 549 FNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGL 608
F + + +SWN ++SAYA HG AV F +MQ + ++PD +F VLSAC H GL
Sbjct: 662 FIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENE-LKPDSVSFLSVLSACRHAGL 720
Query: 609 VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLF 668
V++G RIF+ M + V+H++C+VDLLG++G EA +++ + + +L
Sbjct: 721 VEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
Query: 669 SACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTK 728
++ H NL L L++ + NPS Y Q + ++ R K
Sbjct: 781 NSSRMHCNLWLSNAALCQLVKLEPLNPSHY----------SQDRRLGEVNNVSR---IKK 827
Query: 729 QPGCSWI 735
P CSWI
Sbjct: 828 VPACSWI 834
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 177/717 (24%), Positives = 314/717 (43%), Gaps = 68/717 (9%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++ TR+ H E+L F + + PD Y+ + A+ A A + G ++H
Sbjct: 68 NSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKK----GLRIH 123
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
GL++ ++ +L+ +Y KA DL S + F ++ D +W TM+S
Sbjct: 124 DLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGL------- 176
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
A NG A LF DM+ V D + +++
Sbjct: 177 --------------------------AQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
Query: 204 CS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
S +E D R +H +VI+ GF+ S + LI MY NC + A VF EV +D
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKGFIFAFS--SGLIDMYCNCADLYAAESVFEEV--WRKDES 266
Query: 263 TYNAMIDGLVRVDRNEDAFVMF---RDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQS 319
++ M+ E+ +F R+ A+ + + L G +
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
++ G +V + M+MYS G++ A+ +F +E+RD+VSW+ MI+ + Q ++ AI
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAI 386
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAY 435
+ M R+ I+P+ T S+L + + +H K + ++E ++I+ Y
Sbjct: 387 SLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMY 446
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
+ GR + AL+ F LP K +++N + G+ G + + + + + P++
Sbjct: 447 AKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMV 506
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VK 554
G V+G I++HGF SE + +AL+ M+ KC +L ++ +F+ +
Sbjct: 507 GMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFE 566
Query: 555 RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTR 614
+ T+SWN +++ Y HGQ +EAV F M++ +P+ TF ++ A + + + G
Sbjct: 567 KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK-FQPNAVTFVNIVRAAAELSALRVGMS 625
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL---IKGGYFGANSNICW-SLFSA 670
+ ++ GF + +VD+ + G +E +E+ I Y + W ++ SA
Sbjct: 626 VHSSLIQC-GFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYI-----VSWNTMLSA 679
Query: 671 CAAHGNLRLGRMVARLLLEKDHN--NPSVYVLLS--NICAAAGQWEEAANLRDMMRE 723
AAHG L L L N P LS + C AG EE + + M E
Sbjct: 680 YAAHG---LASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGE 733
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 247/555 (44%), Gaps = 54/555 (9%)
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
Q+H I +GLK H+ + N+ SL+ + +DL+ V F + P W +M+ TR G
Sbjct: 23 QVHGSLIVSGLKPHNQLINAY-SLFQR-QDLSRV--IFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSM 200
+AL F M ++ G+ PD Y+FT
Sbjct: 79 LHREALGFFGYMS--------------------------------EEKGIDPDKYSFTFA 106
Query: 201 LSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
L C+ + DF G +H ++ G + + +L+ MY +V A QVF ++ +
Sbjct: 107 LKACAGSM-DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMH--V 163
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVG--CQA- 315
+D VT+N M+ GL + + A ++F DM+ C + +++ + S L C+
Sbjct: 164 KDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCL 223
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
IK GF A ++ + MY + A+++FE + +D SW M++ +
Sbjct: 224 HGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFF 281
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLG----ASDSLQVVEMVHSLLSKIGLM-KVEVLNS 430
E + + MR + ++ S L D ++ + +H + GL+ V V S
Sbjct: 282 EEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIA-IHDYAVQQGLIGDVSVATS 340
Query: 431 LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
L++ Y + G + A Q+F N+ + ++SW+ +I+ + G + + F ++ +KPN
Sbjct: 341 LMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPN 400
Query: 491 AYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFN 550
A GK +H Y ++ SE+ A+++MYAKCG +L F
Sbjct: 401 AVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFE 460
Query: 551 AMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVD 610
+ +D +++NAL Y Q G +A ++ M++ G+ PD T +L C+
Sbjct: 461 RLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH-GVCPDSRTMVGMLQTCAFCSDYA 519
Query: 611 DGTRIFDMMVNIYGF 625
G+ ++ ++ +GF
Sbjct: 520 RGSCVYGQIIK-HGF 533
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 230/498 (46%), Gaps = 68/498 (13%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I ++ + ++A+ ++ QH E++ LF + H ++P+ TL++ + A
Sbjct: 361 IEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH-IKPNAVTLTSVLQGCAGV----A 415
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A+ G +H +AI+ +++ A +++S+YAK
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVISMYAKC-------------------------- 449
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
G ALK F+++P + VA +NA + + G + AFD++++M+ GV PD
Sbjct: 450 -----GRFSPALKAFERLPIKDAVA-FNA-LAQGYTQIGDANKAFDVYKNMKLHGVCPDS 502
Query: 195 YTFTSMLSLCSVELLDFGRH--VHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
T ML C+ D+ R V+ +I+ GF + V ++LI M+ C + A +F
Sbjct: 503 RTMVGMLQTCAF-CSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFD 561
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSL 309
+ + V++N M++G + + E+A FR M+ F P TFV+++ + S+L
Sbjct: 562 KC-GFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSAL 620
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMF 369
RVG + I+ GF + T V N+ + MY+ G + ++ F + + +VSWN M+S +
Sbjct: 621 RVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAY 680
Query: 370 FQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIG-----LMK 424
L A+ +L M+ ++PD ++ S+L A +VE + ++G +
Sbjct: 681 AAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAE 740
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS-WNTIISG-------FLTNG--CPLQ 474
VE ++ + G A+++ + K+ + W +++ +L+N C L
Sbjct: 741 VEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLV 800
Query: 475 GLEQFSALLNTPLKPNAY 492
LE PL P+ Y
Sbjct: 801 KLE--------PLNPSHY 810
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 166/356 (46%), Gaps = 15/356 (4%)
Query: 302 VMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS 361
++ C + R Q I +G + + NA YS F + + ++ IF+ + + +V
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGLKPHNQLINA----YSLFQRQDLSRVIFDSVRDPGVVL 66
Query: 362 WNIMISMFFQENLNETAI--LTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVHSL 416
WN MI + + L+ A+ Y+ + GI+PD++++ L A S + +H L
Sbjct: 67 WNSMIRGYTRAGLHREALGFFGYMSEEK-GIDPDKYSFTFALKACAGSMDFKKGLRIHDL 125
Query: 417 LSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
++++GL V + +L+ YC+ + A Q+F + K +++WNT++SG NGC
Sbjct: 126 IAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAA 185
Query: 476 LEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTM 535
L F + + + + + +HG +++ GF S G L+ M
Sbjct: 186 LLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDM 243
Query: 536 YAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHAT 595
Y C L + VF + ++D SW +++AYA +G +E + F+ M+ + + +
Sbjct: 244 YCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR-NYDVRMNKVA 302
Query: 596 FTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
L A ++VG + G I D V G + V + ++ + + G LE AE+L
Sbjct: 303 AASALQAAAYVGDLVKGIAIHDYAVQ-QGLIGDVSVATSLMSMYSKCGELEIAEQL 357
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 196/689 (28%), Positives = 325/689 (47%), Gaps = 62/689 (8%)
Query: 101 LLSLYAKAEDL---ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSN 157
LL L A+ D+ +V +F ++ ++S +LG +A+ +F + + +
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTV 145
Query: 158 VAVWNAIITRCGADNGHDDVAFDLFRDMQKIG-VRPDGYTFTSMLSLC-SVELLDFGRHV 215
V+ + A+I+ N + A +F M+K G V+P+ YTF ++L+ C V G +
Sbjct: 146 VS-YTALISGFSRLNLEIE-ALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQI 203
Query: 216 HSVVIRSGFLARTSVVNSLITMY-----FNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDG 270
H ++++SGFL V NSL+++Y +C D ++F E+ RD ++N ++
Sbjct: 204 HGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCD---DVLKLFDEIPQ--RDVASWNTVVSS 258
Query: 271 LVRVDRNEDAFVMFRDMQKA-CFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDA 326
LV+ ++ AF +F +M + F T +++SSC S L G + ++I+ G
Sbjct: 259 LVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ 318
Query: 327 YTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQ-----------ENLN 375
+VNNA + YS F + + ++++E M +D V++ MI+ + N+
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 376 ETAILTY----------------LK----MRRVGIEPDEFTYGSLL---GASDSLQVVEM 412
E +TY LK M + G+E +F+ S + G +V E
Sbjct: 379 EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQ 438
Query: 413 VHSLLSKIGLMKVEVLNSLIAAYC-RNGRINWALQIFSNLP--YKSLISWNTIISGFLTN 469
+H K G + + + C R R+ A ++F P S + +II G+ N
Sbjct: 439 IHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARN 498
Query: 470 GCPLQGLEQF-SALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISL 528
G P + + F L L + G Q+H Y L+ G+ S+ISL
Sbjct: 499 GLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISL 558
Query: 529 GNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPG 588
GN+L++MYAKC D ++ +FN M + D ISWN+LIS Y G EA+ + M
Sbjct: 559 GNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMN-EKE 617
Query: 589 IEPDHATFTIVLSACSHV--GLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLE 646
I+PD T T+V+SA + + +F M IY P+ +H++ V +LG G LE
Sbjct: 618 IKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLE 677
Query: 647 EAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICA 706
EAE I ++ +L +C H N + + VA+L+L PS Y+L SNI +
Sbjct: 678 EAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYS 737
Query: 707 AAGQWEEAANLRDMMREFGTTKQPGCSWI 735
A+G W + +R+ MRE G K P SWI
Sbjct: 738 ASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 183/394 (46%), Gaps = 11/394 (2%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I + N ++++L + + ++ LF +++ D +TLST +++ ++ +
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS----S 299
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G +LH AIR GL V N+L+ Y+K D+ VE + + D ++T M++
Sbjct: 300 VLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMIT 359
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
A G V A+++F + + N +NA++ NGH A LF DM + GV
Sbjct: 360 AYMSFGMVDSAVEIFANVTEK-NTITYNALMAGF-CRNGHGLKALKLFTDMLQRGVELTD 417
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
++ TS + C V +H I+ G + +L+ M C + DA ++F +
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMF-RDMQKACFSPMEATFVSVMSSCSSL--- 309
+ L ++I G R + A +F R + + E + +++ C +L
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMF 369
+G Q ++K G+ + ++ N+ ++MY+ ++A IF M E D++SWN +IS +
Sbjct: 538 EMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY 597
Query: 370 FQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+ + A+ + +M I+PD T ++ A
Sbjct: 598 ILQRNGDEALALWSRMNEKEIKPDIITLTLVISA 631
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 226/534 (42%), Gaps = 84/534 (15%)
Query: 3 KCWFSRQ--MSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLS 60
K F R+ + ++SS ++ L++ +R N E+LK+F ++ + ++P+ YT
Sbjct: 126 KLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFV 185
Query: 61 TAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAK--AEDLASVERAF 118
+TA + + G Q+H +++G V+NSL+SLY K V + F
Sbjct: 186 AILTACVR----VSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLF 241
Query: 119 AEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVA 178
EI D SW T++S+ + G A
Sbjct: 242 DEIPQRDVASWNTVVSSLVK---------------------------------EGKSHKA 268
Query: 179 FDLFRDMQKI-GVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLIT 236
FDLF +M ++ G D +T +++LS C+ +L GR +H IR G + SV N+LI
Sbjct: 269 FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIG 328
Query: 237 MY---------------------FNCGCVVDAYQVFGEVEAGL--------RDHVTYNAM 267
Y ++ AY FG V++ + ++ +TYNA+
Sbjct: 329 FYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNAL 388
Query: 268 IDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGF 324
+ G R A +F DM + + + S + +C S +V Q IK G
Sbjct: 389 MAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGT 448
Query: 325 DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISM---FFQENLNETAI-L 380
+ A + M + ++ +A+ +F++ +L S S+ + + L + A+ L
Sbjct: 449 AFNPCIQTALLDMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARNGLPDKAVSL 507
Query: 381 TYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGLMK-VEVLNSLIAAYC 436
+ + + DE + +L +L EM +H K G + + NSLI+ Y
Sbjct: 508 FHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYA 567
Query: 437 RNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
+ + A++IF+ + +ISWN++IS ++ + L +S + +KP+
Sbjct: 568 KCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPD 621
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 4/234 (1%)
Query: 393 DEFTYGSLLGAS-DSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNL 451
D F Y L A ++V + VH+ K+ K + N+LI+ Y + G A+ +F +L
Sbjct: 81 DGFFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSL 140
Query: 452 PYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL-KPNAYXXXXXXXXXXXXXXXXHG 510
+++S+ +ISGF ++ L+ F + L +PN Y G
Sbjct: 141 SSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
Query: 511 KQVHGYILRHGFSSEISLGNALVTMYAK--CGSLDGSLGVFNAMVKRDTISWNALISAYA 568
Q+HG I++ GF + + + N+L+++Y K S D L +F+ + +RD SWN ++S+
Sbjct: 201 IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV 260
Query: 569 QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNI 622
+ G+ +A F M G D T + +LS+C+ ++ G + + I
Sbjct: 261 KEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRI 314
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 254/514 (49%), Gaps = 42/514 (8%)
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQK--ACFS-PMEATFVSVMSSCSSLRV---GCQAQ 316
++N I G + +++F++++ M + C S P T+ + C+ LR+ G
Sbjct: 120 SWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMIL 179
Query: 317 AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNE 376
+K + + V+NA++ M++ G + A+ +F+ RDLVSWN +I+ + + E
Sbjct: 180 GHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAE 239
Query: 377 TAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGL-MKVEVLNSLI 432
AI Y M G++PD+ T L+ + L + + + + + GL M + ++N+L+
Sbjct: 240 KAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALM 299
Query: 433 AAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGC--------------------- 471
+ + G I+ A +IF NL ++++SW T+ISG+ G
Sbjct: 300 DMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNA 359
Query: 472 ----------PLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG 521
L F + + KP+ G +H YI ++
Sbjct: 360 MIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS 419
Query: 522 FSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFE 581
S ++LG +LV MYAKCG++ +L VF+ + R+++++ A+I A HG A+ F
Sbjct: 420 LSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFN 479
Query: 582 AMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGR 641
M I GI PD TF +LSAC H G++ G F M + + P + H+S +VDLLGR
Sbjct: 480 EM-IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGR 538
Query: 642 SGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLL 701
+G LEEA+RL++ A++ + +L C HGN+ LG A+ LLE D ++ +YVLL
Sbjct: 539 AGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLL 598
Query: 702 SNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ A WE+A R MM E G K PGCS I
Sbjct: 599 DGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 632
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/504 (23%), Positives = 210/504 (41%), Gaps = 87/504 (17%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQI--HSSHTLRPDHYTLSTAITASANTRPA 72
I + I N + + S ES L+ Q+ H RPDH+T A+ R
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR-- 170
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
++ G+ + H ++ L+ SHV N+ + ++A D+ + + F E D SW +
Sbjct: 171 --LSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCL 228
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
++ ++G A+ +++ M+ GV+P
Sbjct: 229 INGYKKIGEAEKAIY---------------------------------VYKLMESEGVKP 255
Query: 193 DGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
D T ++S CS + L+ G+ + V +G +VN+L+ M+ CG + +A ++F
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 252 GEVEA----------------GL-------------RDHVTYNAMIDGLVRVDRNEDAFV 282
+E GL +D V +NAMI G V+ R +DA
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 283 MFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYS 339
+F++MQ + P E T + +S+CS +L VG K A+ + + MY+
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYA 435
Query: 340 CFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGS 399
G ++EA ++F ++ R+ +++ +I TAI + +M GI PDE T+
Sbjct: 436 KCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIG 495
Query: 400 LLGASDSLQVVEMVHSLLSKIGLMKVEV-LNSLIAAYC-------RNGRINWALQIFSNL 451
LL A +++ S+ MK LN + Y R G + A ++ ++
Sbjct: 496 LLSACCHGGMIQTGRDYFSQ---MKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Query: 452 PYKSLISWNTIISGFLTNGCPLQG 475
P ++ + + G L GC + G
Sbjct: 553 PMEA----DAAVWGALLFGCRMHG 572
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 131/278 (47%), Gaps = 11/278 (3%)
Query: 421 GLMKVEVLNSLIAAYC---RNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLE 477
GL+ +S + A+C + ++++++I + ++ SWN I GF + P +
Sbjct: 80 GLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFL 139
Query: 478 QFSALLN---TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVT 534
+ +L +P+ + G + G++L+ + NA +
Sbjct: 140 LYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIH 199
Query: 535 MYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHA 594
M+A CG ++ + VF+ RD +SWN LI+ Y + G+ ++A+ ++ M+ S G++PD
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLME-SEGVKPDDV 258
Query: 595 TFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKG 654
T ++S+CS +G ++ G ++ V G ++ + ++D+ + G + EA R+
Sbjct: 259 TMIGLVSSCSMLGDLNRGKEFYE-YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN 317
Query: 655 GYFGANSNICW-SLFSACAAHGNLRLGRMVARLLLEKD 691
+ + W ++ S A G L + R + + EKD
Sbjct: 318 --LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 217/405 (53%), Gaps = 4/405 (0%)
Query: 332 NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIE 391
N + MY F +N+A +F++M +R+++SW MIS + + +++ A+ + M R +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 392 PDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSN 450
P+ +TY S+L + + + V M+H + K GL V V ++LI + + G AL +F
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 451 LPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHG 510
+ I WN+II GF N LE F + G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 511 KQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQH 570
Q H +I++ + ++ L NALV MY KCGSL+ +L VFN M +RD I+W+ +IS AQ+
Sbjct: 280 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 571 GQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVD 630
G +EA+ FE M+ S G +P++ T VL ACSH GL++DG F M +YG P +
Sbjct: 338 GYSQEALKLFERMK-SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 631 HFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEK 690
H+ C++DLLG++G L++A +L+ ++ +L AC N+ L A+ ++
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456
Query: 691 DHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
D + Y LLSNI A + +W+ +R MR+ G K+PGCSWI
Sbjct: 457 DPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 197/418 (47%), Gaps = 17/418 (4%)
Query: 55 DHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASV 114
D L + T R A + L +H + +S + +S A E
Sbjct: 25 DQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLIC 84
Query: 115 ERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGH 174
+ P + +++ + + DA +LFDQMP R NV W +I+ H
Sbjct: 85 RHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR-NVISWTTMISAYSKCKIH 143
Query: 175 DDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSL 234
A +L M + VRP+ YT++S+L C+ + R +H +I+ G + V ++L
Sbjct: 144 QK-ALELLVLMLRDNVRPNVYTYSSVLRSCNG--MSDVRMLHCGIIKEGLESDVFVRSAL 200
Query: 235 ITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSP 294
I ++ G DA VF E+ G D + +N++I G + R++ A +F+ M++A F
Sbjct: 201 IDVFAKLGEPEDALSVFDEMVTG--DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258
Query: 295 MEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIF 351
+AT SV+ +C+ L +G QA +K +D +NNA + MY G + +A +F
Sbjct: 259 EQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 352 ERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE 411
+M+ERD+++W+ MIS Q ++ A+ + +M+ G +P+ T +L A ++E
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 412 ----MVHSLLSKIGLMKV-EVLNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNTII 463
S+ G+ V E +I + G+++ A+++ + + + ++W T++
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 184/396 (46%), Gaps = 25/396 (6%)
Query: 185 MQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIR----SGFLARTSVVNSLITMYFN 240
+Q G+ D T++ ++ C + + H +++ R +G +VN LI MY
Sbjct: 52 LQSHGLWADSATYSELIKCC---ISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVK 108
Query: 241 CGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFV 300
+ DA+Q+F ++ R+ +++ MI + ++ A + M + P T+
Sbjct: 109 FNLLNDAHQLFDQMPQ--RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYS 166
Query: 301 SVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLV 360
SV+ SC+ + IK G ++ V +A + +++ G+ +A ++F+ M D +
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 361 SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKI 420
WN +I F Q + ++ A+ + +M+R G ++ T S+L A L ++E+ + + +
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL--GMQAHV 284
Query: 421 GLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGL 476
++K + + N+L+ YC+ G + AL++F+ + + +I+W+T+ISG NG + L
Sbjct: 285 HIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 477 EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-----HGFSSEISLGNA 531
+ F + ++ KPN G Y R +G
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG----WYYFRSMKKLYGIDPVREHYGC 400
Query: 532 LVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISA 566
++ + K G LD ++ + N M + D ++W L+ A
Sbjct: 401 MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 10/250 (4%)
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
++N LI Y + +N A Q+F +P +++ISW T+IS + + LE +L
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSL 546
++PN Y + +H I++ G S++ + +AL+ ++AK G + +L
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 547 GVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
VF+ MV D I WN++I +AQ+ + A+ F+ M+ G + AT T VL AC+ +
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK-RAGFIAEQATLTSVLRACTGL 273
Query: 607 GLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWS 666
L++ G + V+I + + + +VD+ + G LE+A R+ I WS
Sbjct: 274 ALLELGMQAH---VHIVKYDQDLILNNALVDMYCKCGSLEDALRVF--NQMKERDVITWS 328
Query: 667 -LFSACAAHG 675
+ S A +G
Sbjct: 329 TMISGLAQNG 338
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 167/566 (29%), Positives = 279/566 (49%), Gaps = 46/566 (8%)
Query: 185 MQKIGVRPDGYTFTSMLSLCSVELLDF---------GRHVHSVVIRSGFLARTSVVNSLI 235
M+K+ + P + S+ S VEL++ GR +H+ ++ SG T + L+
Sbjct: 1 MKKLTIVPSSFRLLSIGSY--VELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLV 58
Query: 236 TMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPM 295
T Y CG V+DA +VF E+ RD MI R +++ FR+M K
Sbjct: 59 TFYVECGKVLDARKVFDEMPK--RDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 296 EATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFE 352
S++ + +L G +K +++ + ++ + MYS FG+V A+ +F
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 353 RMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM 412
+ E+DLV +N MIS + + + A+ M+ +GI+PD T+ +L+ ++ E
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 413 VHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNTIISGFLTNGC 471
V +L + C +G YK ++SW +IISG + N
Sbjct: 237 VSEILELM---------------CLDG-------------YKPDVVSWTSIISGLVHNFQ 268
Query: 472 PLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNA 531
+ + F +L L PN+ HGK++HGY + G + +A
Sbjct: 269 NEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSA 328
Query: 532 LVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEP 591
L+ MY KCG + ++ +F K+ T+++N++I YA HG +AV F+ M+ + G +
Sbjct: 329 LLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQME-ATGEKL 387
Query: 592 DHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
DH TFT +L+ACSH GL D G +F +M N Y VP ++H++C+VDLLGR+G L EA +
Sbjct: 388 DHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEM 447
Query: 652 IKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQW 711
IK + + +L +AC HGN+ L R+ A+ L E + N +LL+++ A AG W
Sbjct: 448 IKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSW 507
Query: 712 EEAANLRDMMREFGTTKQPGCSWIGT 737
E ++ M+++ + G SW+ T
Sbjct: 508 ESVVRMKKMIKKKRFRRFLGSSWVET 533
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 214/503 (42%), Gaps = 76/503 (15%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G LHAH + +G+ + +A L++ Y +
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVEC------------------------------ 64
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
G V DA K+FD+MP R +++ +I C A NG+ + D FR+M K G++ D +
Sbjct: 65 -GKVLDARKVFDEMPKR-DISGCVVMIGAC-ARNGYYQESLDFFREMYKDGLKLDAFIVP 121
Query: 199 SMLSLCSVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
S+L S LLD FG+ +H +V++ + + +V+SLI MY G V +A +VF ++
Sbjct: 122 SLLK-ASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDL-- 178
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQ 316
G +D V +NAMI G + ++A + +DM+ P T+ +++S S +R +
Sbjct: 179 GEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVS 238
Query: 317 AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNE 376
D Y + D+VSW +IS NE
Sbjct: 239 EILELMCLDGY----------------------------KPDVVSWTSIISGLVHNFQNE 270
Query: 377 TAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGLMKVEVLNS-LI 432
A + +M G+ P+ T +LL A +L ++ +H GL + S L+
Sbjct: 271 KAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL 330
Query: 433 AAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAY 492
Y + G I+ A+ +F P K+ +++N++I + +G + +E F + T K +
Sbjct: 331 DMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHL 390
Query: 493 XXXXXXXXXXXXXXXXHGKQVHGYIL---RHGFSSEISLGNALVTMYAKCGSLDGSLGVF 549
G+ + ++L ++ + +V + + G L + +
Sbjct: 391 TFTAILTACSHAGLTDLGQNL--FLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMI 448
Query: 550 NAM-VKRDTISWNALISAYAQHG 571
AM ++ D W AL++A HG
Sbjct: 449 KAMRMEPDLFVWGALLAACRNHG 471
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 158/393 (40%), Gaps = 66/393 (16%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
++ R+ + ESL F +++ L+ D + + + + AS N FG +H
Sbjct: 88 MIGACARNGYYQESLDFFREMYKD-GLKLDAFIVPSLLKASRNL----LDREFGKMIHCL 142
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
++ ++ + + +SL+ +Y+K ++ + + F+++ D + M+S +A
Sbjct: 143 VLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEA 202
Query: 146 LKLFDQMP---NRSNVAVWNAIITRCG--------------------------------- 169
L L M + +V WNA+I+
Sbjct: 203 LNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISG 262
Query: 170 -ADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLAR 227
N ++ AFD F+ M G+ P+ T ++L C ++ + G+ +H + +G
Sbjct: 263 LVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDH 322
Query: 228 TSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
V ++L+ MY CG + +A +F + + VT+N+MI + A +F M
Sbjct: 323 GFVRSALLDMYGKCGFISEAMILFRKTPK--KTTVTFNSMIFCYANHGLADKAVELFDQM 380
Query: 288 QKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNN-----ATMTMYSCF- 341
+ TF +++++CS A G + + + N + Y+C
Sbjct: 381 EATGEKLDHLTFTAILTACS--------HAGLTDLGQNLFLLMQNKYRIVPRLEHYACMV 432
Query: 342 ------GKVNEAQNIFERME-ERDLVSWNIMIS 367
GK+ EA + + M E DL W +++
Sbjct: 433 DLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLA 465
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 58/253 (22%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTF---GNQL 82
+++ L + Q+ ++ F Q+ +H L P+ T+ T + PA T + G ++
Sbjct: 259 IISGLVHNFQNEKAFDAFKQM-LTHGLYPNSATIITLL-------PACTTLAYMKHGKEI 310
Query: 83 HAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHV 142
H +++ TGL+ H V ++LL +Y K G +
Sbjct: 311 HGYSVVTGLEDHGFVRSALLDMYGKC-------------------------------GFI 339
Query: 143 GDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS 202
+A+ LF + P ++ V +N++I C A++G D A +LF M+ G + D TFT++L+
Sbjct: 340 SEAMILFRKTPKKTTVT-FNSMIF-CYANHGLADKAVELFDQMEATGEKLDHLTFTAILT 397
Query: 203 LCS-VELLDFGRHVHSVVI-RSGFLARTSVVNSLITMYFNCGCVVDAYQ----------- 249
CS L D G+++ ++ + + R ++ + G +V+AY+
Sbjct: 398 ACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDL 457
Query: 250 -VFGEVEAGLRDH 261
V+G + A R+H
Sbjct: 458 FVWGALLAACRNH 470
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 245 bits (626), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 257/495 (51%), Gaps = 23/495 (4%)
Query: 260 DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQ 316
D ++N++I L R + +A + F M+K P ++F + +CSSL G Q
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 317 AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNE 376
Q+ G+ + V++A + MYS GK+ +A+ +F+ + +R++VSW MI + +LN
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY---DLNG 156
Query: 377 TAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV------------EMVHSLLSKIGLMK 424
A+ + + ++ ++ L + + V+ E +HS + K G +
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 425 -VEVLNSLIAAYCRNGR--INWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSA 481
V V N+L+ AY + G + A +IF + K +S+N+I+S + +G + E F
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 482 LL-NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
L+ N + NA GK +H ++R G ++ +G +++ MY KCG
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 541 SLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
++ + F+ M ++ SW A+I+ Y HG +A+ F AM I G+ P++ TF VL
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM-IDSGVRPNYITFVSVL 395
Query: 601 SACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGAN 660
+ACSH GL +G R F+ M +G P ++H+ C+VDLLGR+G+L++A LI+ +
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 661 SNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDM 720
S I SL +AC H N+ L + L E D +N Y+LLS+I A AG+W++ +R +
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515
Query: 721 MREFGTTKQPGCSWI 735
M+ G K PG S +
Sbjct: 516 MKNRGLVKPPGFSLL 530
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 169/396 (42%), Gaps = 41/396 (10%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + N ++A L RS E+L F+ + +L P + AI A ++ +
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL-SLYPTRSSFPCAIKACSSLFDIFS 94
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G Q H A G ++ V+++L+ +Y+ L + F EI + SWT+M+
Sbjct: 95 ----GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
G+ DA+ LF + D DD A L D
Sbjct: 151 GYDLNGNALDAVSLFKDLL----------------VDENDDDDAMFL-----------DS 183
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNC--GCVVDAYQVF 251
S++S CS V +HS VI+ GF SV N+L+ Y G V A ++F
Sbjct: 184 MGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEA----TFVSVMSSCS 307
++ +D V+YN+++ + + +AF +FR + K A T + +S
Sbjct: 244 DQIVD--KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
Query: 308 SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMIS 367
+LR+G Q I+ G + V + + MY G+V A+ F+RM+ +++ SW MI+
Sbjct: 302 ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIA 361
Query: 368 MFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+ A+ + M G+ P+ T+ S+L A
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 154/323 (47%), Gaps = 21/323 (6%)
Query: 346 EAQNI---FER-MEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL 401
E QN+ F R +++ D+ SWN +I+ + + A+L + MR++ + P ++ +
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83
Query: 402 GASDSLQVV---EMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLI 457
A SL + + H G + V ++LI Y G++ A ++F +P ++++
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 458 SWNTIISGFLTNGCPLQGLEQFSALL------NTPLKPNAYXXXXXXXXXXXXXXXXHGK 511
SW ++I G+ NG L + F LL + + ++ +
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 512 QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV----FNAMVKRDTISWNALISAY 567
+H ++++ GF +S+GN L+ YAK G +G + V F+ +V +D +S+N+++S Y
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGG--EGGVAVARKIFDQIVDKDRVSYNSIMSVY 261
Query: 568 AQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVP 627
AQ G EA F + + + + T + VL A SH G + G I D ++ + G
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLED 320
Query: 628 SVDHFSCIVDLLGRSGYLEEAER 650
V + I+D+ + G +E A +
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARK 343
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 104/238 (43%), Gaps = 46/238 (19%)
Query: 7 SRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITAS 66
+R++ + +++ N +++ +S E+ ++F ++ + + + TLST + A
Sbjct: 239 ARKIFDQIVDKDRV-SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 67 ANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDD 126
+++ A G +H IR GL+ V S++ +Y K + + +AF ++ +
Sbjct: 298 SHS----GALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353
Query: 127 YSWTTMLSASTRLGHVGDALKLFDQM------PNRS--------------NVAVW---NA 163
SWT M++ GH AL+LF M PN +V W NA
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNA 413
Query: 164 IITRCGADNGHD---------------DVAFDLFRDMQKIGVRPDGYTFTSMLSLCSV 206
+ R G + G + A+DL +Q++ ++PD ++S+L+ C +
Sbjct: 414 MKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL---IQRMKMKPDSIIWSSLLAACRI 468
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 159/514 (30%), Positives = 261/514 (50%), Gaps = 15/514 (2%)
Query: 228 TSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
S+ +IT Y +VDA +F E+ +RD V++N+MI G V A +F +M
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMP--VRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 288 QKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAY-TAVNNATMTMYSCFGKVNE 346
+ ++ ++++ C R G QA+ + TA N+ + Y FGKV++
Sbjct: 124 PERSV----VSWTAMVNGC--FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDD 177
Query: 347 AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS 406
A +F++M ++++SW MI Q + A+ + M R I+ + ++ A +
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 407 LQVVEM---VHSLLSKIGLMKVEVLN-SLIAAYCRNGRINWALQIFSNLPYKSLISWNTI 462
M VH L+ K+G + E ++ SLI Y RI + ++F ++ + W +
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
+SG+ N L FS +L + PN GK++HG ++ G
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGL 357
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEA 582
++ +GN+LV MY+ G+++ ++ VF + K+ +SWN++I AQHG+GK A F
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQ 417
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVN-IYGFVPSVDHFSCIVDLLGR 641
M I EPD TFT +LSACSH G ++ G ++F M + I + H++C+VD+LGR
Sbjct: 418 M-IRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGR 476
Query: 642 SGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLL 701
G L+EAE LI+ N + +L SAC H ++ G A + D + + YVLL
Sbjct: 477 CGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLL 536
Query: 702 SNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
SNI A+AG+W + LR M++ G K+PG SW+
Sbjct: 537 SNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 245/520 (47%), Gaps = 43/520 (8%)
Query: 3 KCWFSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSH----TLRPDHYT 58
KC+ S + T + ++L NHLL S + E+ ++F Q+ S H T YT
Sbjct: 24 KCYRSFSV-TVEFQNREVLICNHLL-----SRRIDEAREVFNQVPSPHVSLYTKMITGYT 77
Query: 59 LSTAITASAN---TRPAATATTFGNQL----HAHAIRTGLKAHSHVAN-SLLSLYA---- 106
S + + N P ++ + + + T +K + S++S A
Sbjct: 78 RSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNG 137
Query: 107 --KAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAI 164
++ + ER F ++ D +W +M+ + G V DALKLF QMP + NV W +
Sbjct: 138 CFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK-NVISWTTM 196
Query: 165 ITRCGAD-NGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRS 222
I CG D N A DLF++M + ++ FT +++ C+ G VH ++I+
Sbjct: 197 I--CGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKL 254
Query: 223 GFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV-TYNAMIDGLVRVDRNEDAF 281
GFL V SLIT Y NC + D+ +VF E + + V + A++ G ++EDA
Sbjct: 255 GFLYEEYVSASLITFYANCKRIGDSRKVFDE---KVHEQVAVWTALLSGYSLNKKHEDAL 311
Query: 282 VMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATMTMY 338
+F M + P ++TF S ++SCS+L G + ++K G + V N+ + MY
Sbjct: 312 SIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMY 371
Query: 339 SCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYG 398
S G VN+A ++F ++ ++ +VSWN +I Q + A + + +M R+ EPDE T+
Sbjct: 372 SDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFT 431
Query: 399 SLLGASDSLQVVE----MVHSLLSKIGLM--KVEVLNSLIAAYCRNGRINWALQIFSNLP 452
LL A +E + + + S I + K++ ++ R G++ A ++ +
Sbjct: 432 GLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV 491
Query: 453 YK-SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
K + + W ++S + +G + +A+ N K +A
Sbjct: 492 VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSA 531
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEA 582
S +SL ++T Y + L +L +F+ M RD +SWN++IS + G AV F+
Sbjct: 63 SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDE 122
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
M E ++T +++ C G VD R+F M
Sbjct: 123 MP-----ERSVVSWTAMVNGCFRSGKVDQAERLFYQM 154
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/562 (28%), Positives = 265/562 (47%), Gaps = 64/562 (11%)
Query: 187 KIGVRPDGYTFTSM-------LSLCS---VELLDFG---------RHVHSVVIRSGFLAR 227
+I +RP Y + +S+CS V +L F + H+ ++++G
Sbjct: 11 EIIIRPQAYNLRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHD 70
Query: 228 TSVVNSLITMYF---NCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMF 284
T + L+ V A+ + + G + T+N++I E A +F
Sbjct: 71 TFSASKLVAFAATNPEPKTVSYAHSILNRI--GSPNGFTHNSVIRAYANSSTPEVALTVF 128
Query: 285 RDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCF 341
R+M P + +F V+ +C++ G Q IK+G V N + +Y
Sbjct: 129 REMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRS 188
Query: 342 GKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL 401
G A+ + +RM RD VSWN ++S + ++ L
Sbjct: 189 GYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL--------------------------- 221
Query: 402 GASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNT 461
V+ +L ++ VE N +I+ Y G + A ++F ++P + ++SWN
Sbjct: 222 --------VDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA 273
Query: 462 IISGFLTNGCPLQGLEQFSALLN-TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
+++ + GC + LE F+ +L+ + KP+ + G+ VH YI +H
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCF 580
G E L ALV MY+KCG +D +L VF A KRD +WN++IS + HG GK+A+ F
Sbjct: 334 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 393
Query: 581 EAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLG 640
M + G +P+ TF VLSAC+HVG++D ++F+MM ++Y P+++H+ C+VDLLG
Sbjct: 394 SEM-VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLG 452
Query: 641 RSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVL 700
R G +EEAE L+ S + SL AC G L +A LLE + + S Y
Sbjct: 453 RMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQ 512
Query: 701 LSNICAAAGQWEEAANLRDMMR 722
+SN+ A+ G+WE+ + R MR
Sbjct: 513 MSNLYASDGRWEKVIDGRRNMR 534
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 174/425 (40%), Gaps = 93/425 (21%)
Query: 153 PNRSNVAVWNAIITRCGADNG--HD------------DVAFDLFRDMQKIGVRPDGYTFT 198
P V+ ++I+ R G+ NG H+ +VA +FR+M V PD Y+FT
Sbjct: 85 PEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFT 144
Query: 199 SMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVN------------------------- 232
+L C+ + GR +H + I+SG + V N
Sbjct: 145 FVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR 204
Query: 233 ------SLITMYFNCGCVVDAYQVFGEVE----------------AGL------------ 258
SL++ Y G V +A +F E+E AGL
Sbjct: 205 DAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMP 264
Query: 259 -RDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSLRVGCQAQ 316
RD V++NAM+ V + +F M + P T VSV+S+C+SL G +Q
Sbjct: 265 VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASL--GSLSQ 322
Query: 317 AQSI-----KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQ 371
+ + K G + + A + MYS GK+++A +F +RD+ +WN +IS
Sbjct: 323 GEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSV 382
Query: 372 ENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM-----KVE 426
L + A+ + +M G +P+ T+ +L A + + +++ L + + +E
Sbjct: 383 HGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIE 442
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG-LEQFSALLNT 485
++ R G+I A ++ + +P +I+ L C G LEQ + N
Sbjct: 443 HYGCMVDLLGRMGKIEEAEELVNEIPADE----ASILLESLLGACKRFGQLEQAERIANR 498
Query: 486 PLKPN 490
L+ N
Sbjct: 499 LLELN 503
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 170/590 (28%), Positives = 290/590 (49%), Gaps = 50/590 (8%)
Query: 192 PDGYTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ 249
P+ +TF +L C+ +L D GR +H+ V+++GF +L++MY V DA +
Sbjct: 29 PNKFTFPPLLKSCA-KLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 250 VFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
V E+ R + NA + GL+ DAF MF D + + T SV+ C +
Sbjct: 88 VLDEMPE--RGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI 145
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMF 369
G Q ++K+GF+ V + ++MYS G+ A +FE++ + +V++N IS
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 370 FQENLNETAILTYLKMRRVGIE-PDEFTYGSLLGASDSL---QVVEMVHSLLSK------ 419
+ + + MR+ E P++ T+ + + A SL Q +H L+ K
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 420 --IGLMKVEVL-------------------------NSLIAAYCRNGRINWALQIFSNLP 452
+G +++ NS+I+ NG+ A+++F L
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 453 YKSL----ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXX 508
+ L +WN++ISGF G ++ + F +L+ + P+
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLK 385
Query: 509 HGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM--VKRDTISWNALISA 566
+GK++HG++++ +I + +L+ MY KCG + +F+ +D + WN +IS
Sbjct: 386 NGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
Y +HG+ + A+ FE ++ +EP ATFT VLSACSH G V+ G++IF +M YG+
Sbjct: 446 YGKHGECESAIEIFELLR-EEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK 504
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARL 686
PS +H C++DLLGRSG L EA+ +I +S++ SL +C H + LG A
Sbjct: 505 PSTEHIGCMIDLLGRSGRLREAKEVID-QMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMK 563
Query: 687 LLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWIG 736
L E + NP+ +V+LS+I AA +WE+ ++R ++ + K PG S G
Sbjct: 564 LAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSLSG 613
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 293 SPMEATFVSVMSSCSSLRVGCQAQ---AQSIKTGF--DAYTAVNNATMTMYSCFGKVNEA 347
SP + TF ++ SC+ L Q + AQ +KTGF D +TA A ++MY +V +A
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTA--TALVSMYMKVKQVTDA 85
Query: 348 QNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
+ + M ER + S N +S + A + R G + T S+LG +
Sbjct: 86 LKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI 145
Query: 408 QVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGF 466
+ +H L K G M+V V SL++ Y R G A ++F +P+KS++++N ISG
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 467 LTNGCPLQGLEQFSALLNTPLK-----PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG 521
+ NG + ++ N K PN +G+Q+HG +++
Sbjct: 206 MENGV----MNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 522 FSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK-RDTISWNALISAYAQHGQGKEAVCCF 580
F E +G AL+ MY+KC + VF + R+ ISWN++IS +GQ + AV F
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 581 EAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLL 639
E + S G++PD AT+ ++S S +G V + + F+ M+++ VPS+ C+ LL
Sbjct: 322 EKLD-SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPSL---KCLTSLL 375
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 152/604 (25%), Positives = 255/604 (42%), Gaps = 99/604 (16%)
Query: 49 SHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKA 108
SH+ P+ +T + + A G LHA ++TG A +L+S+Y K
Sbjct: 26 SHS--PNKFTFPPLLKSCAKLGDVVQ----GRILHAQVVKTGFFVDVFTATALVSMYMKV 79
Query: 109 EDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRC 168
+ V DALK+ D+MP R +A NA ++
Sbjct: 80 K-------------------------------QVTDALKVLDEMPER-GIASVNAAVSGL 107
Query: 169 GADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLART 228
+NG AF +F D + G + T S+L C ++ G +H + ++SGF
Sbjct: 108 -LENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD--IEGGMQLHCLAMKSGFEMEV 164
Query: 229 SVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQ 288
V SL++MY CG V A ++F +V + VTYNA I GL+ +F M+
Sbjct: 165 YVGTSLVSMYSRCGEWVLAARMFEKVPH--KSVVTYNAFISGLMENGVMNLVPSVFNLMR 222
Query: 289 K-ACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKV 344
K + P + TFV+ +++C+S L+ G Q +K F T V A + MYS
Sbjct: 223 KFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCW 282
Query: 345 NEAQNIFERMEE-RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL-G 402
A +F +++ R+L+SWN +IS +ETA+ + K+ G++PD T+ SL+ G
Sbjct: 283 KSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISG 342
Query: 403 ASDSLQVVE------------MVHSLLSKIGLMK-------------------------- 424
S +V+E MV SL L+
Sbjct: 343 FSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERD 402
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNL--PYKSLISWNTIISGFLTNGCPLQGLEQFSAL 482
+ VL SLI Y + G +WA +IF K + WN +ISG+ +G +E F L
Sbjct: 403 IFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELL 462
Query: 483 LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYIL-RHGFSSEISLGNALVTMYAKCGS 541
++P+ G Q+ + +G+ ++ + + G
Sbjct: 463 REEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGR 522
Query: 542 LDGSLGVFNAMVKRDTISWNALISAYAQHGQ---GKEAVCCFEAMQISPGIEPDHATFTI 598
L + V + M + + +++L+ + QH G+EA AM+++ +EP++ +
Sbjct: 523 LREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEA-----AMKLAE-LEPENPAPFV 576
Query: 599 VLSA 602
+LS+
Sbjct: 577 ILSS 580
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 158/349 (45%), Gaps = 14/349 (4%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + ++ N ++ L + +F + + P+ T AITA A+
Sbjct: 190 VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASL----L 245
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDY-SWTTML 133
+G QLH ++ + + V +L+ +Y+K S F E++ + SW +++
Sbjct: 246 NLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVI 305
Query: 134 SASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGV 190
S G A++LF+++ + + + A WN++I+ + G AF F M + +
Sbjct: 306 SGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF-SQLGKVIEAFKFFERMLSVVM 364
Query: 191 RPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ 249
P TS+LS CS + L G+ +H VI++ V+ SLI MY CG A +
Sbjct: 365 VPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARR 424
Query: 250 VFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS-- 307
+F E +D V +N MI G + E A +F +++ P ATF +V+S+CS
Sbjct: 425 IFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHC 484
Query: 308 -SLRVGCQA-QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM 354
++ G Q + + G+ T + + G++ EA+ + ++M
Sbjct: 485 GNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/474 (32%), Positives = 236/474 (49%), Gaps = 39/474 (8%)
Query: 300 VSVMSSCSSLRVGCQAQAQSIKTGF--DAYTAVNNATMTMYSCFGK-VNEAQNIFERMEE 356
+S + CS Q A+ +KTG D+Y + + S + AQ +F+ +
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 357 RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MV 413
D WN+MI F + E ++L Y +M + +T+ SLL A +L E +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 414 HSLLSKIG----LMKVEVL----------------------------NSLIAAYCRNGRI 441
H+ ++K+G + V L NS+I Y + G++
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 442 NWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXX 501
+ AL +F + K+ ISW T+ISG++ + L+ F + N+ ++P+
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 502 XXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWN 561
GK +H Y+ + + LG L+ MYAKCG ++ +L VF + K+ +W
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 562 ALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVN 621
ALIS YA HG G+EA+ F MQ GI+P+ TFT VL+ACS+ GLV++G IF M
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQ-KMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 376
Query: 622 IYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGR 681
Y P+++H+ CIVDLLGR+G L+EA+R I+ N+ I +L AC H N+ LG
Sbjct: 377 DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 436
Query: 682 MVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ +L+ D + YV +NI A +W++AA R +M+E G K PGCS I
Sbjct: 437 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 12/286 (4%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++ + S++ SL L+ ++ S + + YT + + A +N T Q+H
Sbjct: 84 NLMIRGFSCSDEPERSLLLYQRMLCS-SAPHNAYTFPSLLKACSNLSAFEETT----QIH 138
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
A + G + + NSL++ YA + F I PDD SW +++ + G +
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 144 DALKLFDQMPNRSNVAVWNAIIT-RCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS 202
AL LF +M ++ ++ W +I+ AD + A LF +MQ V PD + + LS
Sbjct: 199 IALTLFRKMAEKNAIS-WTTMISGYVQADMNKE--ALQLFHEMQNSDVEPDNVSLANALS 255
Query: 203 LCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH 261
C+ + L+ G+ +HS + ++ + + LI MY CG + +A +VF ++ +
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK--KSV 313
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
+ A+I G +A F +MQK P TF +V+++CS
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS 359
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 176/438 (40%), Gaps = 82/438 (18%)
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSL---YAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
Q+HA ++TGL S+ LS ++ L + F + PD + W M+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYT 196
+ P RS + L++ M + YT
Sbjct: 91 S-----------CSDEPERSLL----------------------LYQRMLCSSAPHNAYT 117
Query: 197 FTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF---- 251
F S+L CS + + +H+ + + G+ VNSLI Y G A+ +F
Sbjct: 118 FPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP 177
Query: 252 ------------GEVEAGLRD-------------HVTYNAMIDGLVRVDRNEDAFVMFRD 286
G V+AG D +++ MI G V+ D N++A +F +
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 287 MQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSI-----KTGFDAYTAVNNATMTMYSCF 341
MQ + P + + +S+C+ L G Q + I KT + + + MY+
Sbjct: 238 MQNSDVEPDNVSLANALSACAQL--GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC 295
Query: 342 GKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL 401
G++ EA +F+ ++++ + +W +IS + AI +++M+++GI+P+ T+ ++L
Sbjct: 296 GEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Query: 402 GASDSLQVVE----MVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSL 456
A +VE + +S+ L +E ++ R G ++ A + +P K
Sbjct: 356 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKP- 414
Query: 457 ISWNTIISGFLTNGCPLQ 474
N +I G L C +
Sbjct: 415 ---NAVIWGALLKACRIH 429
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 238/437 (54%), Gaps = 17/437 (3%)
Query: 299 FVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME 355
F S++ +C SLR G + +++ + +Y+ G A +F+RM
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 356 ERD--LVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVV 410
+RD +WN +IS + + E A+ Y +M G++PD FT+ +L G S+Q+
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 411 EMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
E +H L K G V VLN+L+ Y + G I A +F +P+K +SWN++++G+L +
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG 529
G + L+ F ++ ++P+ HG+Q+HG+++R G E+S+
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDK---VAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
NAL+ +Y+K G L + +F+ M++RDT+SWNA+ISA++++ G + FE M
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMH-RANA 387
Query: 590 EPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
+PD TF VLS C++ G+V+DG R+F +M YG P ++H++C+V+L GR+G +EEA
Sbjct: 388 KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAY 447
Query: 650 RLI-KGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAA 708
+I + A + +L AC HGN +G + A+ L E + +N + LL I + A
Sbjct: 448 SMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKA 507
Query: 709 GQWEEAANLRDMMREFG 725
+ E+ +R MM + G
Sbjct: 508 KRAEDVERVRQMMVDRG 524
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 200/456 (43%), Gaps = 15/456 (3%)
Query: 175 DDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNS 233
D V DL QK + F S+L C S+ +D G VH ++ + +
Sbjct: 73 DSVITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSK 132
Query: 234 LITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFS 293
L+ +Y +CG A++VF + +N++I G + + EDA ++ M +
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK 192
Query: 294 PMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNI 350
P TF V+ +C S+++G +K GF V NA + MY+ G + +A+N+
Sbjct: 193 PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNV 252
Query: 351 FERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV 410
F+ + +D VSWN M++ + L A+ + M + GIEPD+ S+L S +
Sbjct: 253 FDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHG 312
Query: 411 EMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
+H + + G+ ++ V N+LI Y + G++ A IF + + +SWN IIS N
Sbjct: 313 RQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN 372
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISL 528
GL+ F + KP+ G+++ + + +G ++
Sbjct: 373 S---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEH 429
Query: 529 GNALVTMYAKCGSLDG--SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQIS 586
+V +Y + G ++ S+ V ++ W AL+ A HG A Q
Sbjct: 430 YACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEV---AAQRL 486
Query: 587 PGIEPDHA-TFTIVLSACSHVGLVDDGTRIFDMMVN 621
+EPD+ F +++ S +D R+ MMV+
Sbjct: 487 FELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVD 522
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 173/343 (50%), Gaps = 16/343 (4%)
Query: 140 GHVGDALKLFDQMPNR-SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
G+ A ++FD+M R S+ WN++I+ A+ G + A L+ M + GV+PD +TF
Sbjct: 141 GYAEVAHEVFDRMSKRDSSPFAWNSLISGY-AELGQYEDAMALYFQMAEDGVKPDRFTFP 199
Query: 199 SMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
+L C + + G +H +++ GF V+N+L+ MY CG +V A VF +
Sbjct: 200 RVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH- 258
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQA 317
+D+V++N+M+ G + +A +FR M + P + SV++ S + G Q
Sbjct: 259 -KDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHG 317
Query: 318 QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
I+ G + +V NA + +YS G++ +A IF++M ERD VSWN +IS + N
Sbjct: 318 WVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS---AHSKNSN 374
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSK-IGL-MKVEVLNSLI 432
+ + +M R +PD T+ S+L + +V E + SL+SK G+ K+E ++
Sbjct: 375 GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMV 434
Query: 433 AAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
Y R G + A +S + + + + G L C L G
Sbjct: 435 NLYGRAGMMEEA---YSMIVQEMGLEAGPTVWGALLYACYLHG 474
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 45/285 (15%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N L++ Q+ +++ L+ Q+ + ++PD +T + A + G +H
Sbjct: 164 NSLISGYAELGQYEDAMALYFQM-AEDGVKPDRFTFPRVLKACGGI----GSVQIGEAIH 218
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
++ G +V N+L+ +YAK D+ F I + D SW +ML+ G +
Sbjct: 219 RDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLH 278
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
+AL D+FR M + G+ PD +S+L+
Sbjct: 279 EAL---------------------------------DIFRLMVQNGIEPDKVAISSVLA- 304
Query: 204 CSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
V GR +H VIR G SV N+LI +Y G + A +F ++ RD V+
Sbjct: 305 -RVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE--RDTVS 361
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS 308
+NA+I +N + F M +A P TFVSV+S C++
Sbjct: 362 WNAIISAH---SKNSNGLKYFEQMHRANAKPDGITFVSVLSLCAN 403
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 53/227 (23%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTF--GNQLHAHAIRTGLKAHS 95
E+L +F ++ + + PD +S+ + A +F G QLH IR G++
Sbjct: 279 EALDIF-RLMVQNGIEPDKVAISSVL---------ARVLSFKHGRQLHGWVIRRGMEWEL 328
Query: 96 HVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNR 155
VAN+L+ LY+K G +G A +FDQM R
Sbjct: 329 SVANALIVLYSKR-------------------------------GQLGQACFIFDQMLER 357
Query: 156 SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRH 214
V+ WNAII+ ++ F M + +PDG TF S+LSLC+ +++ G
Sbjct: 358 DTVS-WNAIISAHSKNSN----GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGER 412
Query: 215 VHSVVIRS-GFLARTSVVNSLITMYFNCGCVVDAYQVFGE---VEAG 257
+ S++ + G + ++ +Y G + +AY + + +EAG
Sbjct: 413 LFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAG 459
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 221/408 (54%), Gaps = 6/408 (1%)
Query: 332 NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRV-GI 390
N + Y+ G + EA+ +F+ M E+D SW M++ + +++ E A++ Y M+RV
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 391 EPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLMKVEVL-NSLIAAYCRNGRINWALQ 446
P+ FT + A+ +++ + + +H + + GL EVL +SL+ Y + G I+ A
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 447 IFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXX 506
IF + K ++SW ++I + + +G FS L+ + +PN Y
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 507 XXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISA 566
GKQVHGY+ R GF ++LV MY KCG+++ + V + K D +SW +LI
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
AQ+GQ EA+ F+ + + G +PDH TF VLSAC+H GLV+ G F + +
Sbjct: 395 CAQNGQPDEALKYFDLL-LKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 453
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARL 686
+ DH++C+VDLL RSG E+ + +I + + S+ C+ +GN+ L A+
Sbjct: 454 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQE 513
Query: 687 LLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
L + + NP YV ++NI AAAG+WEE +R M+E G TK+PG SW
Sbjct: 514 LFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSW 561
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 209/429 (48%), Gaps = 19/429 (4%)
Query: 53 RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLA 112
+P T I + TR A G ++H H +G + N LL +YAK L
Sbjct: 82 KPPASTYCNLIQVCSQTR----ALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLV 137
Query: 113 SVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADN 172
+ F E+ D SW M++ +G + +A KLFD+M + + + W A++T +
Sbjct: 138 DARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYS-WTAMVTGYVKKD 196
Query: 173 GHDDVAFDLFRDMQKI-GVRPDGYTFT-SMLSLCSVELLDFGRHVHSVVIRSGFLARTSV 230
++ A L+ MQ++ RP+ +T + ++ + +V+ + G+ +H ++R+G + +
Sbjct: 197 QPEE-ALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVL 255
Query: 231 VNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
+SL+ MY CGC+ +A +F ++ +D V++ +MID + R + F +F ++ +
Sbjct: 256 WSSLMDMYGKCGCIDEARNIFDKIVE--KDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 291 CFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
C P E TF V+++C+ L +G Q + GFD Y+ +++ + MY+ G + A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 348 QNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
+++ + + DLVSW +I Q + A+ + + + G +PD T+ ++L A
Sbjct: 374 KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHA 433
Query: 408 QVV----EMVHSLLSKIGLMKV-EVLNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNT 461
+V E +S+ K L + L+ R+GR + S +P K S W +
Sbjct: 434 GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWAS 493
Query: 462 IISGFLTNG 470
++ G T G
Sbjct: 494 VLGGCSTYG 502
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 32/213 (15%)
Query: 471 CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN 530
C + L + LL KP A GK+VH +I GF I + N
Sbjct: 65 CGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 531 ALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHG------------------- 571
L+ MYAKCGSL + VF+ M RD SWN +++ YA+ G
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYS 184
Query: 572 ------------QGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
Q +EA+ + MQ P P+ T +I ++A + V + G I +
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Query: 620 VNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI 652
V G +S ++D+ G+ G ++EA +
Sbjct: 245 VRA-GLDSDEVLWSSLMDMYGKCGCIDEARNIF 276
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/481 (29%), Positives = 242/481 (50%), Gaps = 11/481 (2%)
Query: 260 DHVTYNAMIDGLVRVDRNEDAFVMFRDMQK-ACFSPMEATFVSVMSSCS---SLRVGCQA 315
D N+MI + + D+F ++RD++K CF+P TF ++ SCS + G Q
Sbjct: 41 DSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQL 100
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
+Q + GF A V+ + MY+ FGK+ A+N F+ M R VSW +IS + +
Sbjct: 101 HSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGEL 160
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAY 435
+ A + +M V D Y +++ + L ++ V ++I Y
Sbjct: 161 DLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGY 217
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL-LNTPLKPNAYXX 494
C I+ A ++F +P ++L+SWNT+I G+ N P +G+ F + T L P+
Sbjct: 218 CNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTI 277
Query: 495 XXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK 554
G+ H ++ R ++ + A++ MY+KCG ++ + +F+ M +
Sbjct: 278 LSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE 337
Query: 555 RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTR 614
+ SWNA+I YA +G + A+ F M I +PD T V++AC+H GLV++G +
Sbjct: 338 KQVASWNAMIHGYALNGNARAALDLFVTMMIEE--KPDEITMLAVITACNHGGLVEEGRK 395
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAH 674
F +M + G ++H+ C+VDLLGR+G L+EAE LI F N I S SAC +
Sbjct: 396 WFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQY 454
Query: 675 GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
++ + + +E + N YVLL N+ AA +W++ ++++MR+ K+ GCS
Sbjct: 455 KDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSL 514
Query: 735 I 735
I
Sbjct: 515 I 515
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 206/464 (44%), Gaps = 32/464 (6%)
Query: 129 WTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK- 187
+T L S +G A KLFDQ P R + + N++I + D +F L+RD++K
Sbjct: 13 FTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD-SFALYRDLRKE 71
Query: 188 IGVRPDGYTFTSMLSLCSVELLDF-GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
PD +TFT++ CS+ + + G +HS + R GF A V ++ MY G +
Sbjct: 72 TCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGC 131
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK----ACFSPMEATFVSV 302
A F E+ R V++ A+I G +R + A +F M ++ M FV
Sbjct: 132 ARNAFDEMPH--RSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKS 189
Query: 303 MSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTM----YSCFGKVNEAQNIFERMEERD 358
S+ R+ FD T T T Y ++ A+ +F+ M ER+
Sbjct: 190 GDMTSARRL------------FDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237
Query: 359 LVSWNIMISMFFQENLNETAILTYLKMR-RVGIEPDEFTYGSLLGA---SDSLQVVEMVH 414
LVSWN MI + Q + I + +M+ ++PD+ T S+L A + +L + E H
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 415 SLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPL 473
+ + L KV+V +++ Y + G I A +IF +P K + SWN +I G+ NG
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAR 357
Query: 474 QGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALV 533
L+ F ++ KP+ G++ + G +++I +V
Sbjct: 358 AALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMV 416
Query: 534 TMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEA 576
+ + GSL + + M + + I ++ +SA Q+ + A
Sbjct: 417 DLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERA 460
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 208/475 (43%), Gaps = 61/475 (12%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++ + Q+ +S L+ + PD++T +T +T S + + G QLH
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTT-LTKSCSL---SMCVYQGLQLH 101
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+ R G A +V+ ++ +YAK + AF E+ + + SWT ++S R G +
Sbjct: 102 SQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELD 161
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
A KLFDQMP+ +V ++NA++ DG+ + +
Sbjct: 162 LASKLFDQMPHVKDVVIYNAMM---------------------------DGFVKSG--DM 192
Query: 204 CSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
S L F H VI ++I Y N + A ++F + R+ V+
Sbjct: 193 TSARRL-FDEMTHKTVI---------TWTTMIHGYCNIKDIDAARKLFDAMPE--RNLVS 240
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKAC-FSPMEATFVSVMSSCS-----SLRVGCQAQA 317
+N MI G + + ++ +F++MQ P + T +SV+ + S SL C
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 318 QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
Q K D V A + MYS G++ +A+ IF+ M E+ + SWN MI + N N
Sbjct: 301 QRKK--LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHG-YALNGNAR 357
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHS---LLSKIGL-MKVEVLNSLIA 433
A L + +PDE T +++ A + +VE ++ ++GL K+E ++
Sbjct: 358 AALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVD 417
Query: 434 AYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
R G + A + +N+P++ I+S FL+ + +E+ +L ++
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPN---GIILSSFLSACGQYKDIERAERILKKAVE 469
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 49/233 (21%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ ++ N ++ ++ Q E ++LF ++ ++ +L PD T+ + + A ++T
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT----G 288
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A + G H R L V ++L +Y+K ++ +R F
Sbjct: 289 ALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIF---------------- 332
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
D+MP + VA WNA+I A NG+ A DLF M I +PD
Sbjct: 333 ---------------DEMPEK-QVASWNAMI-HGYALNGNARAALDLFVTMM-IEEKPDE 374
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
T ++++ C+ L++ GR V+ G +N+ I Y GC+VD
Sbjct: 375 ITMLAVITACNHGGLVEEGRKWFHVMREMG-------LNAKIEHY---GCMVD 417
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 164/570 (28%), Positives = 278/570 (48%), Gaps = 18/570 (3%)
Query: 178 AFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVV--NSL 234
AF+ ++M K GV Y++ + C + L GR +H +R G + SV+ N +
Sbjct: 67 AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MRMG-IENPSVLLQNCV 124
Query: 235 ITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSP 294
+ MY C + DA ++F E+ + V+ MI + A +F M + P
Sbjct: 125 LQMYCECRSLEDADKLFDEMSE--LNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 295 MEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIF 351
+ + +++ S +L G Q A I+ G + T++ + MY G + A+ +F
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 352 ERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE 411
++M + V+ ++ + Q A+ ++ + G+E D F + +L A SL+ +
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELN 302
Query: 412 M---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFL 467
+ +H+ ++K+GL +V V L+ Y + A + F + + +SW+ IISG+
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362
Query: 468 TNGCPLQGLEQFSALLNTPLKP-NAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEI 526
+ ++ F +L + N++ G QVH ++
Sbjct: 363 QMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ 422
Query: 527 SLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQIS 586
+AL+TMY+KCG LD + VF +M D ++W A IS +A +G EA+ FE M +S
Sbjct: 423 YGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM-VS 481
Query: 587 PGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLE 646
G++P+ TF VL+ACSH GLV+ G D M+ Y P++DH+ C++D+ RSG L+
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 647 EAERLIKGGYFGANSNICWSLF-SACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNIC 705
EA + +K F ++ + W F S C H NL LG + L + D + + YVL N+
Sbjct: 542 EALKFMKNMPFEPDA-MSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 706 AAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
AG+WEEAA + +M E K+ CSWI
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWI 630
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 198/428 (46%), Gaps = 50/428 (11%)
Query: 53 RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLA 112
+P +T + + N R A FG Q+HAH IR GL +++ + ++++Y K L
Sbjct: 181 KPPSSMYTTLLKSLVNPR----ALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 113 SVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADN 172
+R F ++ + T ++ T+ G DALK
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALK------------------------- 271
Query: 173 GHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVV 231
LF D+ GV D + F+ +L C S+E L+ G+ +H+ V + G + SV
Sbjct: 272 --------LFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 232 NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC 291
L+ Y C A + F E+ + V+++A+I G ++ + E+A F+ ++
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREP--NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 292 FSPMEA-TFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
S + + T+ S+ +CS L +G Q A +IK +A +TMYS G +++A
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 348 QNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
+FE M+ D+V+W IS A+ + KM G++P+ T+ ++L A
Sbjct: 442 NEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHA 501
Query: 408 QVVEM----VHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNT 461
+VE + ++L K + ++ + +I Y R+G ++ AL+ N+P++ +SW
Sbjct: 502 GLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 462 IISGFLTN 469
+SG T+
Sbjct: 562 FLSGCWTH 569
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 149/352 (42%), Gaps = 53/352 (15%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
L+ T++ + ++LKLF + + + D + S + A A+ G Q+HA
Sbjct: 256 LMVGYTQAGRARDALKLFVDL-VTEGVEWDSFVFSVVLKACASLE----ELNLGKQIHAC 310
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
+ GL++ V L+ Y K S RAF EI P+D SW+ ++S ++ +A
Sbjct: 311 VAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 370
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
+K F + ++ N ++ N+ +T+TS+ CS
Sbjct: 371 VKTFKSLRSK-NASILNS-------------------------------FTYTSIFQACS 398
Query: 206 VELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
V L D G VH+ I+ + ++LITMY CGC+ DA +VF ++ D V
Sbjct: 399 V-LADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNP--DIVA 455
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTG 323
+ A I G +A +F M P TF++V+++CS + Q + + T
Sbjct: 456 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK-HCLDTM 514
Query: 324 FDAYTAVNNATMTMYSCF-------GKVNEAQNIFERME-ERDLVSWNIMIS 367
Y T+ Y C G ++EA + M E D +SW +S
Sbjct: 515 LRKYNVA--PTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLS 564
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 132/338 (39%), Gaps = 77/338 (22%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
+++ + +Q E++K F + S + + +T ++ A + G Q+HA
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS----VLADCNIGGQVHAD 412
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
AI+ L + ++L+++Y+K L F ++ PD +WT +S G+ +A
Sbjct: 413 AIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEA 472
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
L+LF++M + G++P+ TF ++L+ CS
Sbjct: 473 LRLFEKMVS---------------------------------CGMKPNSVTFIAVLTACS 499
Query: 206 -VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTY 264
L++ G+H ++R +A T DH Y
Sbjct: 500 HAGLVEQGKHCLDTMLRKYNVAPTI------------------------------DH--Y 527
Query: 265 NAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIK 321
+ MID R ++A ++M F P ++ +S C +L +G + + ++
Sbjct: 528 DCMIDIYARSGLLDEALKFMKNMP---FEPDAMSWKCFLSGCWTHKNLELG-EIAGEELR 583
Query: 322 TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL 359
TA +Y+ GK EA + + M ER L
Sbjct: 584 QLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERML 621
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 292/611 (47%), Gaps = 68/611 (11%)
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
+S +R+G + +A K FD + ++ + WN+I++ + NG A LF +M + V
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKA-IGSWNSIVSGYFS-NGLPKEARQLFDEMSERNVVS 81
Query: 193 -----DGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA 247
GY M+ VE R+V ++ ++ T++V Y G V +A
Sbjct: 82 WNGLVSGYIKNRMI----VE----ARNVFELMPERNVVSWTAMVKG----YMQEGMVGEA 129
Query: 248 YQVFGEVEAGLRDHVTYNAMIDGLV---RVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
+F + R+ V++ M GL+ R+D+ + M P++ V++
Sbjct: 130 ESLFWRMPE--RNEVSWTVMFGGLIDDGRIDKARKLYDMM---------PVK----DVVA 174
Query: 305 SCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
S + + C+ G+V+EA+ IF+ M ER++V+W
Sbjct: 175 STNMIGGLCRE--------------------------GRVDEARLIFDEMRERNVVTWTT 208
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMK 424
MI+ + Q N + A K+ V E E ++ S+L +E + +
Sbjct: 209 MITGYRQNNRVDVA----RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKP 264
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
V N++I + G I+ A ++F + + +W +I + G L+ L+ F+ +
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
++P+ +G+QVH +++R F ++ + + L+TMY KCG L
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+ VF+ +D I WN++IS YA HG G+EA+ F M S G P+ T +L+ACS
Sbjct: 385 AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP-SSGTMPNKVTLIAILTACS 443
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNIC 664
+ G +++G IF+ M + + P+V+H+SC VD+LGR+G +++A LI+ ++ +
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 665 WSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREF 724
+L AC H L L + A+ L E + +N YVLLS+I A+ +W + A +R MR
Sbjct: 504 GALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
Query: 725 GTTKQPGCSWI 735
+K PGCSWI
Sbjct: 564 NVSKFPGCSWI 574
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/515 (22%), Positives = 222/515 (43%), Gaps = 35/515 (6%)
Query: 99 NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNV 158
NS++S Y + F E+ + SW ++S + + +A +F+ MP R NV
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPER-NV 110
Query: 159 AVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML-SLCSVELLDFGRHVHS 217
W A++ + G A LF M + + ++T M L +D R ++
Sbjct: 111 VSWTAMV-KGYMQEGMVGEAESLFWRMPE----RNEVSWTVMFGGLIDDGRIDKARKLYD 165
Query: 218 VVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRN 277
++ +A T+++ L G V +A +F E+ R+ VT+ MI G + +R
Sbjct: 166 MMPVKDVVASTNMIGGLCRE----GRVDEARLIFDEMRE--RNVVTWTTMITGYRQNNRV 219
Query: 278 EDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAY----TAVNNA 333
+ A +F M + E ++ S++ L + + + F+ NA
Sbjct: 220 DVARKLFEVMPEKT----EVSWTSML-----LGYTLSGRIEDAEEFFEVMPMKPVIACNA 270
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
+ + G++++A+ +F+ ME+RD +W MI + ++ A+ + +M++ G+ P
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 394 EFTYGSLLGAS---DSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFS 449
+ S+L SLQ VH+ L + V V + L+ Y + G + A +F
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 450 NLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXH 509
K +I WN+IISG+ ++G + L+ F + ++ PN
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450
Query: 510 GKQVHGYIL-RHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAY 567
G ++ + + + + + V M + G +D ++ + +M +K D W AL+ A
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGAC 510
Query: 568 AQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSA 602
H + A + + + EPD+A ++LS+
Sbjct: 511 KTHSRLDLAEVAAKKLFEN---EPDNAGTYVLLSS 542
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 151/373 (40%), Gaps = 52/373 (13%)
Query: 328 TAVN-NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMR 386
T VN + ++ S GK+NEA+ F+ ++ + + SWN ++S +F L + A + +M
Sbjct: 16 TGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS 75
Query: 387 RVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQ 446
E + ++ L+ +++ ++ + V +++ Y + G + A
Sbjct: 76 ----ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAES 131
Query: 447 IFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXX 506
+F +P ++ +SW + G + +G + + + + P+K
Sbjct: 132 LFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM---PVKD----------------- 171
Query: 507 XXHGKQVHGYILRHGFSSEISL------------GNALVTMYAKCGSLDGSLGVFNAMVK 554
+ G + R G E L ++T Y + +D + +F M +
Sbjct: 172 VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE 231
Query: 555 RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTR 614
+ +SW +++ Y G+ ++A FE M + P I ++ VG + R
Sbjct: 232 KTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVI-----ACNAMIVGFGEVGEISKARR 286
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI----KGGYFGANSNICWSLFSA 670
+FD+M + + ++ R G+ EA L K G + ++ S+ S
Sbjct: 287 VFDLMEDRDNAT-----WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLI-SILSV 340
Query: 671 CAAHGNLRLGRMV 683
CA +L+ GR V
Sbjct: 341 CATLASLQYGRQV 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
++ R E+L LF Q+ +RP +L + ++ A + +G Q+HAH
Sbjct: 302 MIKAYERKGFELEALDLFAQMQK-QGVRPSFPSLISILSVCATL----ASLQYGRQVHAH 356
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
+R +VA+ L+++Y K +L + F D W +++S G +A
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEA 416
Query: 146 LKLFDQMPNR---SNVAVWNAIITRCGADNGHDDVAFDLFRDMQ-KIGVRPDGYTFTSML 201
LK+F +MP+ N AI+T C G + ++F M+ K V P ++
Sbjct: 417 LKIFHEMPSSGTMPNKVTLIAILTACSY-AGKLEEGLEIFESMESKFCVTPTVEHYS--- 472
Query: 202 SLCSVELL 209
C+V++L
Sbjct: 473 --CTVDML 478
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 238 bits (608), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 243/466 (52%), Gaps = 18/466 (3%)
Query: 279 DAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATM 335
D +F + +A TF V+ +CS L G Q A IK G + T A +
Sbjct: 67 DTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALI 126
Query: 336 TMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEF 395
MYS +G + ++ +FE +EE+DLVSWN ++S F + + A+ + M R +E EF
Sbjct: 127 DMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEF 186
Query: 396 TYGSLLGASDSLQVVEM---VHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLP 452
T S++ SL++++ VH+++ G V + ++I+ Y G IN A++++++L
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 453 -YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGK 511
+ + N++ISG + N E F LL + +PN GK
Sbjct: 247 VHTDEVMLNSLISGCIRN---RNYKEAF--LLMSRQRPNVRVLSSSLAGCSDNSDLWIGK 301
Query: 512 QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHG 571
Q+H LR+GF S+ L N L+ MY KCG + + +F A+ + +SW ++I AYA +G
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNG 361
Query: 572 QGKEAVCCFEAM-QISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVD 630
G +A+ F M + G+ P+ TF +V+SAC+H GLV +G F MM Y VP +
Sbjct: 362 DGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTE 421
Query: 631 HFSCIVDLLGRSGYLEEAERLIKGGYFGANSNI---CW-SLFSACAAHGNLRLGRMVARL 686
H+ C +D+L ++G EE RL++ N +I W ++ SAC+ + +L G VAR
Sbjct: 422 HYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARR 481
Query: 687 LLEKD-HNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPG 731
L+E+ N S+YVL+SN AA G+W+ LR ++ G K G
Sbjct: 482 LMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAG 527
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 174/346 (50%), Gaps = 23/346 (6%)
Query: 148 LFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVE 207
LFD++P R ++ + + + + N +D +A LF + + +TFT +L CS
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLA--LFLQIHRASPDLSSHTFTPVLGACS-- 95
Query: 208 LLDF---GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTY 264
LL + GR VH+++I+ G T +LI MY G +VD+ +VF VE +D V++
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEE--KDLVSW 153
Query: 265 NAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQAQSIK 321
NA++ G +R + ++A +F M + E T SV+ +C+SL++ G Q A +
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 322 TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME-ERDLVSWNIMISMFFQENLNETAIL 380
TG D + A ++ YS G +NEA ++ + D V N +IS + + A L
Sbjct: 214 TGRD-LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFL 272
Query: 381 TYLKMRRVGIEPD-EFTYGSLLGASDS--LQVVEMVHSLLSKIGLMK-VEVLNSLIAAYC 436
+ R P+ SL G SD+ L + + +H + + G + ++ N L+ Y
Sbjct: 273 LMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYG 327
Query: 437 RNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL 482
+ G+I A IF +P KS++SW ++I + NG ++ LE F +
Sbjct: 328 KCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREM 373
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 169/382 (44%), Gaps = 59/382 (15%)
Query: 32 RSNQHTESLKLFTQIHSSHTLRPD--HYTLSTAITASANTRPAATATTFGNQLHAHAIRT 89
RS ++L LF QIH + PD +T + + A + T G Q+HA I+
Sbjct: 61 RSGNPNDTLALFLQIHRAS---PDLSSHTFTPVLGACSLLSYPET----GRQVHALMIKQ 113
Query: 90 GLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLF 149
G + + +L+ +Y+K L R F +E D SW +LS R G +AL +F
Sbjct: 114 GAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVF 173
Query: 150 DQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVEL 208
M +R+ +I +T +S++ C S+++
Sbjct: 174 AAM-----------------------------YRERVEI----SEFTLSSVVKTCASLKI 200
Query: 209 LDFGRHVHSVVIRSGFLARTSVV--NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNA 266
L G+ VH++V+ +G R VV ++I+ Y + G + +A +V+ + D V N+
Sbjct: 201 LQQGKQVHAMVVVTG---RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVH-TDEVMLNS 256
Query: 267 MIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTG 323
+I G +R ++AF++ + P S ++ C S L +G Q +++ G
Sbjct: 257 LISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNG 311
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
F + + + N M MY G++ +A+ IF + + +VSW MI + A+ +
Sbjct: 312 FVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFR 371
Query: 384 KM--RRVGIEPDEFTYGSLLGA 403
+M G+ P+ T+ ++ A
Sbjct: 372 EMCEEGSGVLPNSVTFLVVISA 393
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 154/360 (42%), Gaps = 68/360 (18%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAA 73
++ + ++ N LL+ R+ + E+L +F ++ + +TLS+ + A+ +
Sbjct: 144 SVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER-VEISEFTLSSVVKTCASLKILQ 202
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
G Q+HA + TG DL + T M+
Sbjct: 203 Q----GKQVHAMVVVTG------------------RDLVVL--------------GTAMI 226
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
S + +G + +A+K+++ + ++ + N++I+ C + + + + R RP+
Sbjct: 227 SFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ------RPN 280
Query: 194 GYTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
+S L+ CS L G+ +H V +R+GF++ + + N L+ MY CG +V A +F
Sbjct: 281 VRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFR 340
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM--QKACFSPMEATFVSVMSSCSSLR 310
+ + + V++ +MID A +FR+M + + P TF+ V+S+C
Sbjct: 341 AIPS--KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISAC---- 394
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTM-----YSCF-------GKVNEAQNIFERMEERD 358
A A +K G + + + + Y CF G+ E + ERM E D
Sbjct: 395 ----AHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEND 450
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 231/442 (52%), Gaps = 7/442 (1%)
Query: 300 VSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNAT--MTMYSCFGKVNEAQNIFERMEER 357
+ ++S C+SLR Q QA +IK+ + + V T ++ A+++FE M E
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVH 414
D+V +N M + + ++++ GI PD +T+ SLL A + +L+ +H
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 415 SLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPL 473
L K+GL V V +LI Y ++ A +F + ++ +N +I+G+ P
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 212
Query: 474 QGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALV 533
+ L F + LKPN GK +H Y +H F + + AL+
Sbjct: 213 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALI 272
Query: 534 TMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDH 593
M+AKCGSLD ++ +F M +DT +W+A+I AYA HG+ ++++ FE M+ S ++PD
Sbjct: 273 DMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR-SENVQPDE 331
Query: 594 ATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
TF +L+ACSH G V++G + F MV+ +G VPS+ H+ +VDLL R+G LE+A I
Sbjct: 332 ITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFID 391
Query: 654 GGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEE 713
+ L +AC++H NL L V+ + E D ++ YV+LSN+ A +WE
Sbjct: 392 KLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEY 451
Query: 714 AANLRDMMREFGTTKQPGCSWI 735
+LR +M++ K PGCS I
Sbjct: 452 VDSLRKVMKDRKAVKVPGCSSI 473
Score = 143 bits (360), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 146/284 (51%), Gaps = 13/284 (4%)
Query: 179 FDLFRDMQKIGVRPDGYTFTSMLSLCSV-ELLDFGRHVHSVVIRSGFLARTSVVNSLITM 237
F LF ++ + G+ PD YTF S+L C+V + L+ GR +H + ++ G V +LI M
Sbjct: 114 FSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINM 173
Query: 238 YFNCGCVVDAYQVFGE-VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPME 296
Y C V A VF VE + V YNAMI G R +R +A +FR+MQ P E
Sbjct: 174 YTECEDVDSARCVFDRIVEPCV---VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNE 230
Query: 297 ATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
T +SV+SSC+ SL +G + K F Y VN A + M++ G +++A +IFE+
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 354 MEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE-- 411
M +D +W+ MI + E ++L + +MR ++PDE T+ LL A VE
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
Query: 412 --MVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLP 452
++SK G++ ++ S++ R G + A + LP
Sbjct: 351 RKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/540 (28%), Positives = 279/540 (51%), Gaps = 19/540 (3%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAII--TRCGADNGHDDVAFDLF 182
+++ T ++ T G V DA K+FD+ + SNV WNA++ T + DV F
Sbjct: 145 NEFLRTKLVHMYTACGSVKDAQKVFDESTS-SNVYSWNALLRGTVISGKKRYQDV-LSTF 202
Query: 183 RDMQKIGVRPDGYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNC 241
+M+++GV + Y+ +++ S L G H++ I++G + SL+ MYF C
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 242 GCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM--QKACF--SPMEA 297
G V A +VF E+ RD V + AMI GL R +A +FR M ++ + S +
Sbjct: 263 GKVGLARRVFDEIVE--RDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 298 TFVSVMSSCSSLRVGCQAQAQSIKT-GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE 356
T + V+ +L++G + A +K+ + V++ + +Y G + + +F ++
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQ 380
Query: 357 RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSL 416
R+ +SW ++S + + A+ + + M++ G PD T ++L L+ ++ +
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 417 ----LSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCP 472
L + L V ++ SL+ Y + G + +++F L +++ +W +I ++ N C
Sbjct: 441 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVEN-CD 499
Query: 473 LQ-GLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNA 531
L+ G+E F +L + +P++ GK++HG+IL+ F S +
Sbjct: 500 LRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAR 559
Query: 532 LVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEP 591
++ MY KCG L + F+A+ + +++W A+I AY + ++A+ CFE M +S G P
Sbjct: 560 IIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQM-VSRGFTP 618
Query: 592 DHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
+ TFT VLS CS G VD+ R F++M+ +Y PS +H+S +++LL R G +EEA+RL
Sbjct: 619 NTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 138/321 (42%), Gaps = 13/321 (4%)
Query: 366 ISMFFQENLNETA--ILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKI 420
I +F ++N E A IL YL+ R GI + T+ +LL A SL + VH +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQR--GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRIN 140
Query: 421 GLMKVEVLNS-LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG--LE 477
GL E L + L+ Y G + A ++F ++ SWN ++ G + +G L
Sbjct: 141 GLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLS 200
Query: 478 QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYA 537
F+ + + N Y G + H +++G + + L +LV MY
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 538 KCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFT 597
KCG + + VF+ +V+RD + W A+I+ A + + EA+ F M I P+ T
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 598 IVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYF 657
+L V + G + ++ +V S ++DL + G + R+ G
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGS-- 378
Query: 658 GANSNICWS-LFSACAAHGNL 677
+ I W+ L S AA+G
Sbjct: 379 KQRNAISWTALMSGYAANGRF 399
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 39/200 (19%)
Query: 53 RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLA 112
RPD T+ +T ++ + A G +LH H ++ ++ V+ ++ +Y K DL
Sbjct: 516 RPDSVTMGRVLTVCSDLK----ALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 113 SVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADN 172
S +F + +WT ++ A DA+ F+QM +R
Sbjct: 572 SANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSR----------------- 614
Query: 173 GHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVV 231
G P+ +TFT++LS+CS +D ++++R L +
Sbjct: 615 ----------------GFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEH 658
Query: 232 NSLITMYFN-CGCVVDAYQV 250
SL+ N CG V +A ++
Sbjct: 659 YSLVIELLNRCGRVEEAQRL 678
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 182/615 (29%), Positives = 284/615 (46%), Gaps = 107/615 (17%)
Query: 212 GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGL 271
GR +H V++SG + + NS++ MY C + DA VF + A L D ++N M+DG
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRD-HAKL-DSASFNIMVDGY 117
Query: 272 VRVDRNEDAFVMFRDM-QKAC----------------------FSPM--------EATFV 300
VR R DA +F M +++C F M E T
Sbjct: 118 VRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLA 177
Query: 301 SVMSSCSSLR--VGCQA-QAQSIKTGFDAYTAVN-------------------------- 331
+V+S+CS L C+ Q+ +IK + V+
Sbjct: 178 TVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER 237
Query: 332 -----NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMR 386
N + YS G + +A+ +F+++ E+D+VSW MI ++N + A++ Y +M
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEML 297
Query: 387 RVGIEPDEFTYGSLLGAS------------------------DSLQVVEMVHSLLS---K 419
R G++P E LL AS D LQ + +S K
Sbjct: 298 RCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIK 357
Query: 420 IGLMKVEV--------LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGC 471
+ L + E N+LIA + +NG + A ++F K + SWN +ISG+ +
Sbjct: 358 LALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLS 417
Query: 472 PLQGLEQFSALLNTP-LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN 530
P L F ++++ +KP+A GK+ H Y+ +L
Sbjct: 418 PQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTA 477
Query: 531 ALVTMYAKCGSLDGSLGVFNAM--VKRDTIS-WNALISAYAQHGQGKEAVCCFEAMQISP 587
A++ MYAKCGS++ +L +F+ + TIS WNA+I A HG K A+ + +Q P
Sbjct: 478 AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLP 537
Query: 588 GIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEE 647
I+P+ TF VLSAC H GLV+ G F+ M + +G P + H+ C+VDLLG++G LEE
Sbjct: 538 -IKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEE 596
Query: 648 AERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAA 707
A+ +IK A+ I L SA HGN+ + + A L D ++ V+LSN+ A
Sbjct: 597 AKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYAD 656
Query: 708 AGQWEEAANLRDMMR 722
AG+WE+ A +R+ MR
Sbjct: 657 AGRWEDVALVREEMR 671
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 160/618 (25%), Positives = 265/618 (42%), Gaps = 87/618 (14%)
Query: 62 AITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEI 121
A+ ++ + ++ T G Q+H +++GL ++ ++ NS+L++YAK LA E F +
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 122 EYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDL 181
D S+ M+ R + DALKLFD MP RS V+ + + A N A +L
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSY--TTLIKGYAQNNQWSEAMEL 160
Query: 182 FRDMQKIGVRPDGYTFTSMLSLCSVELLDFG-----RHVHSVVIRSGFLARTSVVNSLIT 236
FR+M+ +G+ + T +++S CS G R + S+ I+ R V +L+
Sbjct: 161 FREMRNLGIMLNEVTLATVISACS----HLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLH 216
Query: 237 MYFNCGCVVDAYQVFGEV----------------EAGL-------------RDHVTYNAM 267
MY C C+ DA ++F E+ +AGL +D V++ M
Sbjct: 217 MYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTM 276
Query: 268 IDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGF 324
IDG +R ++ ++A V + +M + P E V ++S+ + G Q +K GF
Sbjct: 277 IDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGF 336
Query: 325 DAY-------------------------------TAVNNATMTMYSCFGKVNEAQNIFER 353
D Y A NA + + G V +A+ +F++
Sbjct: 337 DCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ 396
Query: 354 MEERDLVSWNIMISMFFQENLNETAILTYLKM-RRVGIEPDEFTYGSLLGASDSLQVVEM 412
++D+ SWN MIS + Q + A+ + +M ++PD T S+ A SL +E
Sbjct: 397 THDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEE 456
Query: 413 VHSLLSKIGLMKVEVLNSLIAA----YCRNGRINWALQIF---SNLPYKSLISWNTIISG 465
+ + ++L AA Y + G I AL IF N+ ++ WN II G
Sbjct: 457 GKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICG 516
Query: 466 FLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSS 524
T+G L+ +S L + P+KPN+ GK + HG
Sbjct: 517 SATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEP 576
Query: 525 EISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAM 583
+I +V + K G L+ + + M VK D + W L+SA HG + A A
Sbjct: 577 DIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAE---LAA 633
Query: 584 QISPGIEPDHATFTIVLS 601
I+P H ++LS
Sbjct: 634 TELAAIDPSHGGCKVMLS 651
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 169/367 (46%), Gaps = 27/367 (7%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I+ + I+ ++ R NQ E+L +T++ ++P + ++ASA +
Sbjct: 265 ITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC-GMKPSEVMMVDLLSASARS----V 319
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
++ G QLH ++ G + + +++ YA + D+ + F S +++
Sbjct: 320 GSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIA 379
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDM-QKIGVRPD 193
+ G V A ++FDQ ++ ++ WNA+I+ A + +A LFR+M V+PD
Sbjct: 380 GFVKNGMVEQAREVFDQTHDK-DIFSWNAMISGY-AQSLSPQLALHLFREMISSSQVKPD 437
Query: 194 GYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
T S+ S + S+ L+ G+ H + S ++ ++I MY CG + A +F
Sbjct: 438 AITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFH 497
Query: 253 EVEAGLRDHVT-YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV 311
+ + ++ +NA+I G + A ++ D+Q P TFV V+S+C
Sbjct: 498 QTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC----- 552
Query: 312 GCQAQAQSI-KTGFDAYTAVN--NATMTMYSCF-------GKVNEAQNIFERMEER-DLV 360
C A + KT F++ + + + Y C G++ EA+ + ++M + D++
Sbjct: 553 -CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVM 611
Query: 361 SWNIMIS 367
W +++S
Sbjct: 612 IWGMLLS 618
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 177/584 (30%), Positives = 279/584 (47%), Gaps = 56/584 (9%)
Query: 195 YTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMY--FNCGCVVDAYQV 250
Y+ S+LS C V +F G+ +H+ I SG + +V L+T Y FN ++D Q
Sbjct: 84 YSSASLLSTC-VGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFN---LLDEAQT 139
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL- 309
E L + +N +I +R R +++ +++ M E T+ SV+ +C++L
Sbjct: 140 ITENSEILHP-LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALL 198
Query: 310 --RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMIS 367
G + V NA ++MY FGKV+ A+ +F+RM ERD VSWN +I+
Sbjct: 199 DFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIIN 258
Query: 368 MFFQENLNETAILTYLKMRRVGIEPDEFTY----------GSLLGASD----------SL 407
+ E A +M G+E T+ G+ +GA + +
Sbjct: 259 CYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRI 318
Query: 408 QVVEMVHSL--LSKIGLMKV-------------------EVLNSLIAAYCRNGRINWALQ 446
V M++ L S IG +K V NSLI Y R + A
Sbjct: 319 GSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFI 378
Query: 447 IFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXX 506
+F + SL +WN+IISGF N + +L + PN
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 507 XXHGKQVHGYILR-HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALIS 565
HGK+ H YILR + + L N+LV MYAK G + + VF++M KRD +++ +LI
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 566 AYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGF 625
Y + G+G+ A+ F+ M S GI+PDH T VLSACSH LV +G +F M +++G
Sbjct: 499 GYGRLGKGEVALAWFKDMDRS-GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGI 557
Query: 626 VPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVA- 684
++H+SC+VDL R+GYL++A + + +S +C +L AC HGN +G A
Sbjct: 558 RLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAAD 617
Query: 685 RLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTK 728
+LLLE + Y+LL+++ A G W + ++ ++ + G K
Sbjct: 618 KLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 229/486 (47%), Gaps = 33/486 (6%)
Query: 9 QMSTTTISSEQI--LKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITAS 66
+ T T +SE + L N L+ + R+ + ES+ ++ ++ S +R D +T + I A
Sbjct: 136 EAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK-GIRADEFTYPSVIKAC 194
Query: 67 ANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDD 126
A A +G +H + + + +V N+L+S+Y + + R F + D
Sbjct: 195 A----ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDA 250
Query: 127 YSWTTMLSASTRLGHVGDALKLFDQM---PNRSNVAVWNAIITRCGADNGHDDVAFDLFR 183
SW +++ T +G+A KL D+M +++ WN I C + G+ A +
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC-LEAGNYIGALNCVV 309
Query: 184 DMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLAR--TSVVNSLITMYFN 240
M+ VR + L CS + L +G+ H +VIRS + +V NSLITMY
Sbjct: 310 GMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSR 369
Query: 241 CGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFV 300
C + A+ VF +VEA T+N++I G +R+E+ + ++M + F P T
Sbjct: 370 CSDLRHAFIVFQQVEAN--SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLA 427
Query: 301 SVMSSCSSLRVGCQAQAQSI------KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM 354
S++ + RVG + + + + N+ + MY+ G++ A+ +F+ M
Sbjct: 428 SILPLFA--RVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 355 EERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVH 414
+RD V++ +I + + E A+ + M R GI+PD T ++L A +V H
Sbjct: 486 RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGH 545
Query: 415 SLLSKI----GL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
L +K+ G+ +++E + ++ YCR G ++ A IF +PY+ ++ + L
Sbjct: 546 WLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEP----SSAMCATLLK 601
Query: 470 GCPLQG 475
C + G
Sbjct: 602 ACLIHG 607
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 177/584 (30%), Positives = 279/584 (47%), Gaps = 56/584 (9%)
Query: 195 YTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMY--FNCGCVVDAYQV 250
Y+ S+LS C V +F G+ +H+ I SG + +V L+T Y FN ++D Q
Sbjct: 84 YSSASLLSTC-VGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFN---LLDEAQT 139
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL- 309
E L + +N +I +R R +++ +++ M E T+ SV+ +C++L
Sbjct: 140 ITENSEILHP-LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALL 198
Query: 310 --RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMIS 367
G + V NA ++MY FGKV+ A+ +F+RM ERD VSWN +I+
Sbjct: 199 DFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIIN 258
Query: 368 MFFQENLNETAILTYLKMRRVGIEPDEFTY----------GSLLGASD----------SL 407
+ E A +M G+E T+ G+ +GA + +
Sbjct: 259 CYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRI 318
Query: 408 QVVEMVHSL--LSKIGLMKV-------------------EVLNSLIAAYCRNGRINWALQ 446
V M++ L S IG +K V NSLI Y R + A
Sbjct: 319 GSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFI 378
Query: 447 IFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXX 506
+F + SL +WN+IISGF N + +L + PN
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 507 XXHGKQVHGYILR-HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALIS 565
HGK+ H YILR + + L N+LV MYAK G + + VF++M KRD +++ +LI
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 566 AYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGF 625
Y + G+G+ A+ F+ M S GI+PDH T VLSACSH LV +G +F M +++G
Sbjct: 499 GYGRLGKGEVALAWFKDMDRS-GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGI 557
Query: 626 VPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVA- 684
++H+SC+VDL R+GYL++A + + +S +C +L AC HGN +G A
Sbjct: 558 RLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAAD 617
Query: 685 RLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTK 728
+LLLE + Y+LL+++ A G W + ++ ++ + G K
Sbjct: 618 KLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 229/486 (47%), Gaps = 33/486 (6%)
Query: 9 QMSTTTISSEQI--LKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITAS 66
+ T T +SE + L N L+ + R+ + ES+ ++ ++ S +R D +T + I A
Sbjct: 136 EAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK-GIRADEFTYPSVIKAC 194
Query: 67 ANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDD 126
A A +G +H + + + +V N+L+S+Y + + R F + D
Sbjct: 195 A----ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDA 250
Query: 127 YSWTTMLSASTRLGHVGDALKLFDQM---PNRSNVAVWNAIITRCGADNGHDDVAFDLFR 183
SW +++ T +G+A KL D+M +++ WN I C + G+ A +
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGC-LEAGNYIGALNCVV 309
Query: 184 DMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLAR--TSVVNSLITMYFN 240
M+ VR + L CS + L +G+ H +VIRS + +V NSLITMY
Sbjct: 310 GMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSR 369
Query: 241 CGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFV 300
C + A+ VF +VEA T+N++I G +R+E+ + ++M + F P T
Sbjct: 370 CSDLRHAFIVFQQVEAN--SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLA 427
Query: 301 SVMSSCSSLRVGCQAQAQSI------KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM 354
S++ + RVG + + + + N+ + MY+ G++ A+ +F+ M
Sbjct: 428 SILPLFA--RVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 355 EERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVH 414
+RD V++ +I + + E A+ + M R GI+PD T ++L A +V H
Sbjct: 486 RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGH 545
Query: 415 SLLSKI----GL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
L +K+ G+ +++E + ++ YCR G ++ A IF +PY+ ++ + L
Sbjct: 546 WLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEP----SSAMCATLLK 601
Query: 470 GCPLQG 475
C + G
Sbjct: 602 ACLIHG 607
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 274/584 (46%), Gaps = 46/584 (7%)
Query: 193 DGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFN--CGCVVDAYQV 250
D F S+L +C D + +HS I G + L + + G V AY++
Sbjct: 33 DYSRFISILGVCKTT--DQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKL 90
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS--- 307
F ++ D V +N MI G +VD + + ++ +M K +P TF +++
Sbjct: 91 FVKIPEP--DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDG 148
Query: 308 -SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMI 366
+L G + +K G + V NA + MYS G ++ A+ +F+R + D+ SWN+MI
Sbjct: 149 GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMI 208
Query: 367 SMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ---VVEMVHSLLSKI--- 420
S + + E +I ++M R + P T +L A ++ + + VH +S+
Sbjct: 209 SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 421 ----------------GLMKVEV-------------LNSLIAAYCRNGRINWALQIFSNL 451
G M + V S++ Y G + A F +
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 452 PYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGK 511
P + ISW +I G+L GC + LE F + + + P+ + G+
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 512 QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHG 571
+ YI ++ +++ +GNAL+ MY KCG + + VF+ M +RD +W A++ A +G
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 572 QGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDH 631
QG+EA+ F MQ I+PD T+ VLSAC+H G+VD + F M + + PS+ H
Sbjct: 449 QGQEAIKVFFQMQ-DMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 632 FSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKD 691
+ C+VD+LGR+G ++EA +++ NS + +L A H + + + A+ +LE +
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELE 567
Query: 692 HNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+N +VY LL NI A +W++ +R + + K PG S I
Sbjct: 568 PDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 181/397 (45%), Gaps = 56/397 (14%)
Query: 17 SEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATAT 76
E + N +++ R ++ ES++L ++ + + P TL ++A + +
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMER-NLVSPTSVTLLLVLSACSKVKD----K 252
Query: 77 TFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
++H + + + N+L++ YA ++ R F ++ D SWT+++
Sbjct: 253 DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGY 312
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIIT---RCGADNGHDDVAFDLFRDMQKIGVRPD 193
G++ A FDQMP R ++ W +I R G N + ++FR+MQ G+ PD
Sbjct: 313 VERGNLKLARTYFDQMPVRDRIS-WTIMIDGYLRAGCFNE----SLEIFREMQSAGMIPD 367
Query: 194 GYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
+T S+L+ C+ + L+ G + + + ++ V N+LI MYF CGC A +VF
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVG 312
+++ RD T+ AM+ GL + ++A +F MQ P + T++ V+S+C+
Sbjct: 428 DMDQ--RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNH---- 481
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME-----ERDLVSWNIMIS 367
G V++A+ F +M E LV + M+
Sbjct: 482 ----------------------------SGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 368 MFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS 404
M + L + A Y +R++ + P+ +G+LLGAS
Sbjct: 514 MLGRAGLVKEA---YEILRKMPMNPNSIVWGALLGAS 547
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 205/509 (40%), Gaps = 81/509 (15%)
Query: 13 TTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPA 72
I ++ N+++ ++ + E ++L+ + + PD +T + +
Sbjct: 92 VKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNM-LKEGVTPDSHTFPFLLNG---LKRD 147
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
A G +LH H ++ GL ++ +V N+L+ +Y+ + F D +SW M
Sbjct: 148 GGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM 207
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
+S R+ +++ +L +M++ V P
Sbjct: 208 ISGYNRMKEYEESI---------------------------------ELLVEMERNLVSP 234
Query: 193 DGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
T +LS CS V+ D + VH V + N+L+ Y CG + A ++F
Sbjct: 235 TSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIF 294
Query: 252 ----------------GEVEAG-------------LRDHVTYNAMIDGLVRVDRNEDAFV 282
G VE G +RD +++ MIDG +R ++
Sbjct: 295 RSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLE 354
Query: 283 MFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYS 339
+FR+MQ A P E T VSV+++C+ SL +G + K V NA + MY
Sbjct: 355 IFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYF 414
Query: 340 CFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGS 399
G +AQ +F M++RD +W M+ + AI + +M+ + I+PD+ TY
Sbjct: 415 KCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLG 474
Query: 400 LLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYC------RNGRINWALQIFSNLPY 453
+L A + +V+ +K+ + SL+ C R G + A +I +P
Sbjct: 475 VLSACNHSGMVDQARKFFAKMR-SDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP- 532
Query: 454 KSLISWNTIISGFLTNGCPLQGLEQFSAL 482
++ N+I+ G L L E + L
Sbjct: 533 ---MNPNSIVWGALLGASRLHNDEPMAEL 558
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 219/504 (43%), Gaps = 51/504 (10%)
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTS 199
GHV A KLF ++P +V VWN +I + + D L+ +M K GV PD +TF
Sbjct: 82 GHVSYAYKLFVKIPE-PDVVVWNNMI-KGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPF 139
Query: 200 MLSLCSVE--LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
+L+ + L G+ +H V++ G + V N+L+ MY CG + A VF
Sbjct: 140 LLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR--RC 197
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVG--CQA 315
D ++N MI G R+ E++ + +M++ SP T + V+S+CS ++ C+
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 316 QAQSI-KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN----------- 363
+ + + + + NA + Y+ G+++ A IF M+ RD++SW
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGN 317
Query: 364 --------------------IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
IMI + + ++ + +M+ G+ PDEFT S+L A
Sbjct: 318 LKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTA 377
Query: 404 S---DSLQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISW 459
SL++ E + + + K + V V N+LI Y + G A ++F ++ + +W
Sbjct: 378 CAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTW 437
Query: 460 NTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR 519
++ G NG + ++ F + + ++P+ ++ +R
Sbjct: 438 TAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAK-MR 496
Query: 520 HGFSSEISLGN--ALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEA 576
E SL + +V M + G + + + M + ++I W AL+ A H E
Sbjct: 497 SDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHND--EP 554
Query: 577 VCCFEAMQISPGIEPDHATFTIVL 600
+ A +I +EPD+ +L
Sbjct: 555 MAELAAKKILE-LEPDNGAVYALL 577
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 11/314 (3%)
Query: 375 NETAILTYLKMRRV--GIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVL-NSL 431
+E +I L M + I D + S+LG + + +HS G+ L
Sbjct: 13 SELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKL 72
Query: 432 IAAYCRN--GRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKP 489
+C G +++A ++F +P ++ WN +I G+ C +G+ + +L + P
Sbjct: 73 FVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTP 132
Query: 490 NAYXXXXXXXXXXXXXXXXH-GKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
+++ GK++H ++++ G S + + NALV MY+ CG +D + GV
Sbjct: 133 DSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGV 192
Query: 549 FNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGL 608
F+ K D SWN +IS Y + + +E++ M+ + + P T +VLSACS V
Sbjct: 193 FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNL-VSPTSVTLLLVLSACSKVKD 251
Query: 609 VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SL 667
D R+ + V+ PS+ + +V+ G ++ A R+ + A I W S+
Sbjct: 252 KDLCKRVHE-YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRS--MKARDVISWTSI 308
Query: 668 FSACAAHGNLRLGR 681
GNL+L R
Sbjct: 309 VKGYVERGNLKLAR 322
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 233/466 (50%), Gaps = 10/466 (2%)
Query: 279 DAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATM 335
++ ++R M ++ SP +F ++ SC+SL + G Q K G + V A +
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 336 TMYSCFGKVNEAQNIFERMEERDLVS--WNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
+MY G V +A+ +FE + +S +N +IS + + A + +M+ G+ D
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 394 EFTYGSLLG---ASDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFS 449
T L+ + L + +H K GL +V VLNS I Y + G + ++F
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 450 NLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXH 509
+P K LI+WN +ISG+ NG LE + + ++ + P+ +
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 510 GKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQ 569
G +V + +GF + + NA ++MYA+CG+L + VF+ M + +SW A+I Y
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 335
Query: 570 HGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSV 629
HG G+ + F+ M I GI PD A F +VLSACSH GL D G +F M Y P
Sbjct: 336 HGMGEIGLMLFDDM-IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGP 394
Query: 630 DHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLE 689
+H+SC+VDLLGR+G L+EA I+ + + +L AC H N+ + + ++E
Sbjct: 395 EHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 454
Query: 690 KDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ NN YVL+SNI + + E +R MMRE K+PG S++
Sbjct: 455 FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 199/434 (45%), Gaps = 13/434 (2%)
Query: 178 AFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLIT 236
+ L+R M + G PD ++F +L C S+ L G+ +H V + G V+ +LI+
Sbjct: 37 SISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALIS 96
Query: 237 MYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPME 296
MY CG V DA +VF E + V YNA+I G + DA MFR M++ S
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 297 ATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
T + ++ C+ L +G Q +K G D+ AV N+ +TMY G V + +F+
Sbjct: 157 VTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 354 MEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMV 413
M + L++WN +IS + Q L + Y +M+ G+ PD FT S+L + L ++
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 414 H---SLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
H L+ G + V V N+ I+ Y R G + A +F +P KSL+SW +I + +
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISL 528
G GL F ++ ++P+ G ++ + R +
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 529 GNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISP 587
+ LV + + G LD ++ +M V+ D W AL+ A H A F +
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI--- 453
Query: 588 GIEPDHATFTIVLS 601
EP++ + +++S
Sbjct: 454 EFEPNNIGYYVLMS 467
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 184/378 (48%), Gaps = 13/378 (3%)
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLS 418
WN+ + ++L +I Y M R G PD F++ +L + SL + + +H ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 419 KIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS--WNTIISGFLTNGCPLQG 475
K G + VL +LI+ YC+ G + A ++F P S +S +N +ISG+ N
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 476 LEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTM 535
F + T + ++ G+ +HG ++ G SE+++ N+ +TM
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 536 YAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHAT 595
Y KCGS++ +F+ M + I+WNA+IS Y+Q+G + + +E M+ S G+ PD T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK-SSGVCPDPFT 259
Query: 596 FTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGG 655
VLS+C+H+G G + +V GFVP+V + + + R G L +A +
Sbjct: 260 LVSVLSSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD-- 316
Query: 656 YFGANSNICWSLFSAC-AAHGNLRLGRMVARLLLEKD-HNNPSVYVLLSNICAAAGQWEE 713
S + W+ C HG +G M+ ++++ + +V+V++ + C+ +G ++
Sbjct: 317 IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDK 376
Query: 714 AANL-RDMMREFGTTKQP 730
L R M RE+ P
Sbjct: 377 GLELFRAMKREYKLEPGP 394
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 136/338 (40%), Gaps = 59/338 (17%)
Query: 78 FGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAST 137
G LH ++ GL + V NS +++Y K
Sbjct: 174 LGRSLHGQCVKGGLDSEVAVLNSFITMYMKC----------------------------- 204
Query: 138 RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
G V +LFD+MP + + WNA+I+ + NG +L+ M+ GV PD +T
Sbjct: 205 --GSVEAGRRLFDEMPVK-GLITWNAVISGY-SQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 198 TSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
S+LS C+ + G V +V +GF+ V N+ I+MY CG + A VF +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP- 319
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQ 316
++ V++ AMI E ++F DM K P A FV V+S+CS
Sbjct: 320 -VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS--------H 370
Query: 317 AQSIKTGFDAYTAVN-----NATMTMYSCF-------GKVNEAQNIFERME-ERDLVSWN 363
+ G + + A+ YSC G+++EA E M E D W
Sbjct: 371 SGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWG 430
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL 401
++ + A L + K+ + EP+ Y L+
Sbjct: 431 ALLGACKIHKNVDMAELAFAKV--IEFEPNNIGYYVLM 466
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 231/441 (52%), Gaps = 39/441 (8%)
Query: 332 NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE-NLNETAILTYLKMRRVGI 390
N ++ Y G + A+ +F+ M ERD+VSWN M+ + Q+ NL+E A+ Y + RR GI
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHE-ALWFYKEFRRSGI 175
Query: 391 EPDEFTYGSLLGA---SDSLQVVEMVHSLL-------------------SKIGLMK---- 424
+ +EF++ LL A S LQ+ H + +K G M+
Sbjct: 176 KFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKR 235
Query: 425 ---------VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
+ + +LI+ Y + G + A ++F +P K+ +SW +I+G++ G +
Sbjct: 236 CFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRA 295
Query: 476 LEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTM 535
L+ F ++ +KP + HGK++HGY++R + ++L+ M
Sbjct: 296 LDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDM 355
Query: 536 YAKCGSLDGSLGVFNAMV-KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHA 594
Y+K GSL+ S VF K D + WN +ISA AQHG G +A+ + M I ++P+
Sbjct: 356 YSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM-IKFRVQPNRT 414
Query: 595 TFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKG 654
T ++L+ACSH GLV++G R F+ M +G VP +H++C++DLLGR+G +E R I+
Sbjct: 415 TLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEE 474
Query: 655 GYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEA 714
F + +I ++ C HGN LG+ A L++ D + + Y+LLS+I A G+WE
Sbjct: 475 MPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELV 534
Query: 715 ANLRDMMREFGTTKQPGCSWI 735
LR +M++ K+ SWI
Sbjct: 535 EKLRGVMKKRRVNKEKAVSWI 555
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 164/369 (44%), Gaps = 39/369 (10%)
Query: 79 GNQLHAHAIRTGLK-AHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAST 137
G +H H TG K ++ ++N L+ +Y K + F ++ + YSW M+S
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 138 RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD-NGHDDVAFDLFRDMQKIGVRPDGYT 196
+ G + A +FD MP R +V WN ++ D N H+ + F +++ ++ G++ + ++
Sbjct: 125 KSGMLVRARVVFDSMPER-DVVSWNTMVIGYAQDGNLHEALWF--YKEFRRSGIKFNEFS 181
Query: 197 FTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCG------------- 242
F +L+ C L R H V+ +GFL+ + S+I Y CG
Sbjct: 182 FAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT 241
Query: 243 --------CVVDAYQVFGEVEAG--------LRDHVTYNAMIDGLVRVDRNEDAFVMFRD 286
++ Y G++EA ++ V++ A+I G VR A +FR
Sbjct: 242 VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 287 MQKACFSPMEATFVSVM---SSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGK 343
M P + TF S + +S +SLR G + I+T V ++ + MYS G
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS 361
Query: 344 VNEAQNIFERMEER-DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
+ ++ +F +++ D V WN MIS Q L A+ M + ++P+ T +L
Sbjct: 362 LEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILN 421
Query: 403 ASDSLQVVE 411
A +VE
Sbjct: 422 ACSHSGLVE 430
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 15/298 (5%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAA 73
++ ++ N ++ + E+L + + S ++ + ++ + +TA +R
Sbjct: 138 SMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFAGLLTACVKSR--- 193
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
Q H + G ++ ++ S++ YAK + S +R F E+ D + WTT++
Sbjct: 194 -QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLI 252
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAII---TRCGADNGHDDVAFDLFRDMQKIGV 190
S +LG + A KLF +MP ++ V+ W A+I R G+ N A DLFR M +GV
Sbjct: 253 SGYAKLGDMEAAEKLFCEMPEKNPVS-WTALIAGYVRQGSGNR----ALDLFRKMIALGV 307
Query: 191 RPDGYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ 249
+P+ +TF+S L + S+ L G+ +H +IR+ V++SLI MY G + + +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 250 VFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
VF + D V +N MI L + A M DM K P T V ++++CS
Sbjct: 368 VF-RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS 424
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 111/532 (20%), Positives = 211/532 (39%), Gaps = 88/532 (16%)
Query: 153 PNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDF 211
P + + V + +++ A A + + G+R S+L C + L
Sbjct: 6 PRKRPICVAQSFLSK-HATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQ 64
Query: 212 GRHVHSVVIRSGF-LARTSVVNSLITMYFNCGCVVDAYQVF----------------GEV 254
G+ +H + +GF T + N LI MY CG +DA +VF G V
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 255 EAGL-------------RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
++G+ RD V++N M+ G + +A +++ +++ E +F
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAG 184
Query: 302 VMSSC---SSLRVGCQAQAQSIKTGF-----------DAYTAVNNAT--------MTM-- 337
++++C L++ QA Q + GF DAY MT+
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 338 ----------YSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
Y+ G + A+ +F M E++ VSW +I+ + ++ A+ + KM
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 388 VGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINW 443
+G++P++FT+ S L AS S+ + + +H + + + V++SLI Y ++G +
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 444 ALQIFSNLPYK-SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXX 502
+ ++F K + WNT+IS +G + L ++ ++PN
Sbjct: 365 SERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS 424
Query: 503 XXXXXXHG-KQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISW 560
G + ++HG + L+ + + G + M + D W
Sbjct: 425 HSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIW 484
Query: 561 NALISAYAQHGQ---GKEAVCCFEAMQISP----------GIEPDHATFTIV 599
NA++ HG GK+A E +++ P I DH + +V
Sbjct: 485 NAILGVCRIHGNEELGKKAA--DELIKLDPESSAPYILLSSIYADHGKWELV 534
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 268/552 (48%), Gaps = 15/552 (2%)
Query: 197 FTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTS---VVNSLITMYFNCGCVVDAYQVFG 252
+L +C+ L G +H+ +I + +R +NSLI +Y C V A ++F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFS-PMEATFVSVMSSCSS--- 308
+ R+ V++ AM+ G + + +F+ M + S P E V SCS+
Sbjct: 94 LMPE--RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGR 151
Query: 309 LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISM 368
+ G Q +K G ++ V N + MYS EA + + + DL ++ +S
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MK 424
+ + + + K + TY S L +L+ + + VHS + + G +
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAE 271
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
VE +LI Y + G++ +A ++F + +++ TI+ + + + L FS +
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT 331
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
+ PN Y G +HG +L+ G+ + + +GNALV MYAK GS++
Sbjct: 332 KEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIED 391
Query: 545 SLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
+ F+ M RD ++WN +IS + HG G+EA+ F+ M I G P+ TF VL ACS
Sbjct: 392 ARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM-IFTGEIPNRITFIGVLQACS 450
Query: 605 HVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNIC 664
H+G V+ G F+ ++ + P + H++CIV LL ++G ++AE ++ +
Sbjct: 451 HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510
Query: 665 WSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREF 724
+L +AC N RLG+ VA +EK N+ VYVLLSNI A + +WE A +R +M
Sbjct: 511 RTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNR 570
Query: 725 GTTKQPGCSWIG 736
G K+PG SWIG
Sbjct: 571 GVKKEPGVSWIG 582
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 218/502 (43%), Gaps = 49/502 (9%)
Query: 79 GNQLHAHAIRTGLKAHSHVA---NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSA 135
G +HAH I T + + A NSL++LY K +
Sbjct: 50 GESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR---------------------- 87
Query: 136 STRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG-VRPDG 194
A KLFD MP R NV W A++ + ++G D LF+ M G RP+
Sbjct: 88 ---------ARKLFDLMPER-NVVSWCAMM-KGYQNSGFDFEVLKLFKSMFFSGESRPNE 136
Query: 195 YTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
+ T + CS ++ G+ H ++ G ++ V N+L+ MY C +A +V +
Sbjct: 137 FVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDD 196
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR--- 310
+ D +++ + G + ++ + R F T++S + S+LR
Sbjct: 197 LPYC--DLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLN 254
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFF 370
+ Q ++ ++ GF+A A + MY GKV AQ +F+ +++ ++ +F
Sbjct: 255 LALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYF 314
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLMK-VE 426
Q+ E A+ + KM + P+E+T+ LL + L ++ +++H L+ K G V
Sbjct: 315 QDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVM 374
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
V N+L+ Y ++G I A + FS + ++ +++WNT+ISG +G + LE F ++ T
Sbjct: 375 VGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG 434
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH-GFSSEISLGNALVTMYAKCGSL-DG 544
PN G +++ +I +V + +K G D
Sbjct: 435 EIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDA 494
Query: 545 SLGVFNAMVKRDTISWNALISA 566
+ A ++ D ++W L++A
Sbjct: 495 EDFMRTAPIEWDVVAWRTLLNA 516
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 177/443 (39%), Gaps = 52/443 (11%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHV 97
E LKLF + S RP+ + + + +N+ G Q H ++ GL +H V
Sbjct: 118 EVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE----GKQFHGCFLKYGLISHEFV 173
Query: 98 ANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSN 157
N+L+ +Y+ R ++ Y D +++ LS G + L + + N
Sbjct: 174 RNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANED- 232
Query: 158 VAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVH 216
VWN + T+ S L L S + L+ VH
Sbjct: 233 -FVWNNL-------------------------------TYLSSLRLFSNLRDLNLALQVH 260
Query: 217 SVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDR 276
S ++R GF A +LI MY CG V+ A +VF + A ++ ++D +
Sbjct: 261 SRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHA--QNIFLNTTIMDAYFQDKS 318
Query: 277 NEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTAVNNA 333
E+A +F M P E TF +++S S L+ G +K+G+ + V NA
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
+ MY+ G + +A+ F M RD+V+WN MIS L A+ + +M G P+
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438
Query: 394 EFTYGSLLGASDSLQVVEM----VHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIF 448
T+ +L A + VE + L+ K + ++ ++ + G A
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFM 498
Query: 449 SNLPYKSLISWNTIISGFLTNGC 471
P I W+ + L N C
Sbjct: 499 RTAP----IEWDVVAWRTLLNAC 517
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 235 bits (599), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 178/658 (27%), Positives = 312/658 (47%), Gaps = 86/658 (13%)
Query: 54 PDHYTLSTAIT-ASANTRPAATATTFGNQLHAHAIRTGL-KAHSHVANSLLSLYAKAEDL 111
P+ T+S ++ AS + R G QLH +++ GL A + V LL LY + + L
Sbjct: 113 PNQSTVSGLLSCASLDVRA-------GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLL 165
Query: 112 ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD 171
E ++F+ MP +S + WN +++ G
Sbjct: 166 EMAE-------------------------------QVFEDMPFKS-LETWNHMMSLLGHR 193
Query: 172 NGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSV 230
+ F FR++ ++G +F +L S V+ LD + +H + G SV
Sbjct: 194 GFLKECMF-FFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISV 252
Query: 231 VNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
VNSLI+ Y CG A ++F + AG D V++NA+I + + A +F M +
Sbjct: 253 VNSLISAYGKCGNTHMAERMFQD--AGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 291 CFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
FSP + T+VSV+ S +++ G Q IK G + + NA + Y+ G + ++
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 348 QNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
+ F+ + ++++V WN ++S + ++ + +L+M ++G P E+T+ + L S +
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTAL-KSCCV 428
Query: 408 QVVEMVHSLLSKIGLMKVE-VLNSLIAAYCRNGRIN-------WA--------------- 444
++ +HS++ ++G + VL+SL+ +Y +N +N WA
Sbjct: 429 TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 445 ----------LQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXX 494
+++ S L +SWN I+ + + +E F +L + ++P+ Y
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 495 XXXXXXXXXXXXXXHGKQVHGYILRHGFS-SEISLGNALVTMYAKCGSLDGSLGVFNAMV 553
G +HG I + FS ++ + N L+ MY KCGS+ + VF
Sbjct: 549 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR 608
Query: 554 KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT 613
+++ I+W ALIS HG G+EA+ F+ +S G +PD +F +L+AC H G+V +G
Sbjct: 609 EKNLITWTALISCLGIHGYGQEALEKFKE-TLSLGFKPDRVSFISILTACRHGGMVKEGM 667
Query: 614 RIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSAC 671
+F M + YG P +DH+ C VDLL R+GYL+EAE LI+ F A++ + + C
Sbjct: 668 GLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 198/397 (49%), Gaps = 12/397 (3%)
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVR 273
H S+ + S L V N++I++Y G V A +VF ++ R+ V++N +I G +
Sbjct: 35 HALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE--RNKVSFNTIIKGYSK 92
Query: 274 VDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL--RVGCQAQAQSIKTG-FDAYTAV 330
+ A+ +F +M+ + P ++T VS + SC+SL R G Q S+K G F A V
Sbjct: 93 YGDVDKAWGVFSEMRYFGYLPNQST-VSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFV 151
Query: 331 NNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGI 390
+ +Y + A+ +FE M + L +WN M+S+ + + + ++ R+G
Sbjct: 152 GTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGA 211
Query: 391 EPDEFTY-GSLLGAS--DSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQ 446
E ++ G L G S L + + +H +K GL ++ V+NSLI+AY + G + A +
Sbjct: 212 SLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAER 271
Query: 447 IFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXX 506
+F + ++SWN II + PL+ L+ F ++ PN
Sbjct: 272 MFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQL 331
Query: 507 XXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISA 566
G+Q+HG ++++G + I LGNAL+ YAKCG+L+ S F+ + ++ + WNAL+S
Sbjct: 332 LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
YA G + F M + G P TF+ L +C
Sbjct: 392 YANK-DGPICLSLFLQM-LQMGFRPTEYTFSTALKSC 426
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 158/677 (23%), Positives = 296/677 (43%), Gaps = 75/677 (11%)
Query: 105 YAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAI 164
+A+ + L ++ + Y ++S +LG V A K+FDQMP R+ V+ +N I
Sbjct: 28 FARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVS-FNTI 86
Query: 165 ITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSG- 223
I + + G D A+ +F +M+ G P+ T + +LS S++ + G +H + ++ G
Sbjct: 87 I-KGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD-VRAGTQLHGLSLKYGL 144
Query: 224 FLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVM 283
F+A V L+ +Y + A QVF ++ + T+N M+ L ++
Sbjct: 145 FMADAFVGTCLLCLYGRLDLLEMAEQVFEDMP--FKSLETWNHMMSLLGHRGFLKECMFF 202
Query: 284 FRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSC 340
FR++ + S E++F+ V+ S ++ + Q + K G D +V N+ ++ Y
Sbjct: 203 FRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGK 262
Query: 341 FGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSL 400
G + A+ +F+ D+VSWN +I + A+ ++ M G P++ TY S+
Sbjct: 263 CGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSV 322
Query: 401 LGASDSLQVV---EMVHSLLSKIGLMKVEVL-NSLIAAYCRNGRINWALQIFSNLPYKSL 456
LG S +Q++ +H +L K G VL N+LI Y + G + + F + K++
Sbjct: 323 LGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI 382
Query: 457 ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGY 516
+ WN ++SG+ P+ L F +L +P Y +Q+H
Sbjct: 383 VCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSV 437
Query: 517 ILRHGF---------------------------------SSEISLGNALVTMYAKCGSLD 543
I+R G+ +S + L N + +Y++ G
Sbjct: 438 IVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL-NIVAGIYSRRGQYH 496
Query: 544 GSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
S+ + + + + DT+SWN I+A ++ +E + F+ M + I PD TF +LS C
Sbjct: 497 ESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHM-LQSNIRPDKYTFVSILSLC 555
Query: 604 SHVGLVDDGTRIFDMMVNIYGFVPSVDHFSC--------IVDLLGRSGYLEEAERLIKGG 655
S + + G+ +I+G + D FSC ++D+ G+ G + ++ +
Sbjct: 556 SKLCDLTLGS-------SIHGLITKTD-FSCADTFVCNVLIDMYGKCGSIRSVMKVFEET 607
Query: 656 YFGANSNICWSLFSACA---AHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWE 712
+ I W+ +C +G L + L L + S +L+ C G +
Sbjct: 608 R--EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT-ACRHGGMVK 664
Query: 713 EAANLRDMMREFGTTKQ 729
E L M+++G +
Sbjct: 665 EGMGLFQKMKDYGVEPE 681
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 198/488 (40%), Gaps = 81/488 (16%)
Query: 17 SEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATAT 76
S I+ N ++ +S ++LKLF + H P+ T + + S+
Sbjct: 278 SWDIVSWNAIICATAKSENPLKALKLFVSM-PEHGFSPNQGTYVSVLGVSS----LVQLL 332
Query: 77 TFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
+ G Q+H I+ G + + N+L+ YAK
Sbjct: 333 SCGRQIHGMLIKNGCETGIVLGNALIDFYAKC---------------------------- 364
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYT 196
G++ D+ FD + ++ N+ WNA+++ G N + LF M ++G RP YT
Sbjct: 365 ---GNLEDSRLCFDYIRDK-NIVCWNALLS--GYANKDGPICLSLFLQMLQMGFRPTEYT 418
Query: 197 FTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA--------- 247
F++ L C V L + +HSV++R G+ V++SL+ Y + DA
Sbjct: 419 FSTALKSCCVTEL---QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASG 475
Query: 248 -------------YQVFGEVEAGLR--------DHVTYNAMIDGLVRVDRNEDAFVMFRD 286
Y G+ ++ D V++N I R D +E+ +F+
Sbjct: 476 PTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKH 535
Query: 287 MQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFD-AYTAVNNATMTMYSCFG 342
M ++ P + TFVS++S CS L +G KT F A T V N + MY G
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 343 KVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
+ +FE E++L++W +IS + A+ + + +G +PD ++ S+L
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
Query: 403 ASDSLQVVEMVHSLLSKIGLMKVEV----LNSLIAAYCRNGRINWALQIFSNLPYKSLIS 458
A +V+ L K+ VE + RNG + A + +P+ +
Sbjct: 656 ACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAP 715
Query: 459 -WNTIISG 465
W T + G
Sbjct: 716 VWRTFLDG 723
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 13 TTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPA 72
+T+ + N +A +RS+ H E ++LF + S+ +RPD YT + ++ +
Sbjct: 503 STLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN-IRPDKYTFVSILSLCSKL--- 558
Query: 73 ATATTFGNQLHAHAIRTGLK-AHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTT 131
T G+ +H +T A + V N L+ +Y K + SV + F E + +WT
Sbjct: 559 -CDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTA 617
Query: 132 MLSASTRLGHVGDALKLFDQM------PNRSNVAVWNAIITRCGADNGHDDVAFDLFRDM 185
++S G+ +AL+ F + P+R + + +I+T C G LF+ M
Sbjct: 618 LISCLGIHGYGQEALEKFKETLSLGFKPDRVS---FISILTAC-RHGGMVKEGMGLFQKM 673
Query: 186 QKIGVRPDGYTFTSMLSLCSVELL 209
+ GV P+ + C+V+LL
Sbjct: 674 KDYGVEPEMDHYR-----CAVDLL 692
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 220/442 (49%), Gaps = 34/442 (7%)
Query: 327 YTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMR 386
Y +N Y+ GK+ + +F + + DL + I+ L + A L Y+++
Sbjct: 63 YPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL 122
Query: 387 RVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWAL 445
I P+EFT+ SLL S S + +++H+ + K GL + V L+ Y + G + A
Sbjct: 123 SSEINPNEFTFSSLL-KSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQ 181
Query: 446 QIFSNLPYKSLIS-------------------------------WNTIISGFLTNGCPLQ 474
++F +P +SL+S WN +I G+ +G P
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241
Query: 475 GLEQFSALL-NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALV 533
L F LL KP+ G+ +H ++ + + L+
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLI 301
Query: 534 TMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDH 593
MY+KCGSL+ ++ VFN ++D ++WNA+I+ YA HG ++A+ F MQ G++P
Sbjct: 302 DMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTD 361
Query: 594 ATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
TF L AC+H GLV++G RIF+ M YG P ++H+ C+V LLGR+G L+ A IK
Sbjct: 362 ITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIK 421
Query: 654 GGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEE 713
A+S + S+ +C HG+ LG+ +A L+ + N +YVLLSNI A+ G +E
Sbjct: 422 NMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEG 481
Query: 714 AANLRDMMREFGTTKQPGCSWI 735
A +R++M+E G K+PG S I
Sbjct: 482 VAKVRNLMKEKGIVKEPGISTI 503
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 16/273 (5%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHV 97
++ L+ Q+ SS + P+ +T S+ + + +T G +H H ++ GL +V
Sbjct: 113 QAFLLYVQLLSSE-INPNEFTFSSLLKS--------CSTKSGKLIHTHVLKFGLGIDPYV 163
Query: 98 ANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSN 157
A L+ +YAK D+ S ++ F + S T M++ + G+V A LFD M R +
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER-D 222
Query: 158 VAVWNAIITRCGADNGHDDVAFDLFRDMQKIG-VRPDGYTFTSMLSLCS-VELLDFGRHV 215
+ WN +I A +G + A LF+ + G +PD T + LS CS + L+ GR +
Sbjct: 223 IVSWNVMIDGY-AQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
Query: 216 HSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVD 275
H V S V LI MY CG + +A VF + +D V +NAMI G
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR--KDIVAWNAMIAGYAMHG 339
Query: 276 RNEDAFVMFRDMQKAC-FSPMEATFVSVMSSCS 307
++DA +F +MQ P + TF+ + +C+
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACA 372
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 197/483 (40%), Gaps = 81/483 (16%)
Query: 214 HVHSVVIRSGFL--ARTSVVN-SLITMYFNCGCVVDAYQVFGEV---EAGLRDHVTYNAM 267
+H+ ++R L R V+N L Y + G + + +F + + L A
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 268 IDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAY 327
I+GL + AF+++ + + +P E TF S++ SCS+ + G +K G
Sbjct: 107 INGL-----KDQAFLLYVQLLSSEINPNEFTFSSLLKSCST-KSGKLIHTHVLKFGLGID 160
Query: 328 TAVNNATMTMYSCFGKVNEAQNIFERME-------------------------------E 356
V + +Y+ G V AQ +F+RM E
Sbjct: 161 PYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCE 220
Query: 357 RDLVSWNIMISMFFQENLNETAILTYLKMRRVG-IEPDEFTYGSLLGASDSLQVVEM--- 412
RD+VSWN+MI + Q A++ + K+ G +PDE T + L A + +E
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 413 VHSLL--SKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNG 470
+H + S+I L V+V LI Y + G + A+ +F++ P K +++WN +I+G+ +G
Sbjct: 281 IHVFVKSSRIRL-NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Query: 471 CPLQGLEQFSALLN-TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYI-LRHGFSSEISL 528
L F+ + T L+P G ++ + +G +I
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEH 399
Query: 529 GNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQ---GKEAVCCFEAMQ 584
LV++ + G L + M + D++ W++++ + HG GKE
Sbjct: 400 YGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEI-------- 451
Query: 585 ISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGY 644
A + I GL + I+ ++ NIY V + + + +L+ G
Sbjct: 452 ---------AEYLI--------GLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGI 494
Query: 645 LEE 647
++E
Sbjct: 495 VKE 497
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 169/376 (44%), Gaps = 50/376 (13%)
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTS 199
G + +L LF Q + ++ ++ A I + NG D AF L+ + + P+ +TF+S
Sbjct: 78 GKIRHSLALFHQTID-PDLFLFTAAIN-TASINGLKDQAFLLYVQLLSSEINPNEFTFSS 135
Query: 200 MLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF-------- 251
+L CS + G+ +H+ V++ G V L+ +Y G VV A +VF
Sbjct: 136 LLKSCSTK---SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 252 -------------GEVEAGL--------RDHVTYNAMIDGLVRVDRNEDAFVMFRD-MQK 289
G VEA RD V++N MIDG + DA ++F+ + +
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 290 ACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNE 346
P E T V+ +S+CS +L G + V + MYS G + E
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 347 AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRV-GIEPDEFTY-GSLLGAS 404
A +F +D+V+WN MI+ + ++ A+ + +M+ + G++P + T+ G+L +
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACA 372
Query: 405 DSLQV---VEMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKS-LISW 459
+ V + + S+ + G+ K+E L++ R G++ A + N+ + + W
Sbjct: 373 HAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLW 432
Query: 460 NTIISGFLTNGCPLQG 475
++++ C L G
Sbjct: 433 SSVL-----GSCKLHG 443
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 41/297 (13%)
Query: 387 RVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM---KVEVLN-SLIAAYCRNGRIN 442
R + P E L+ S S+ V +H+ + + L+ + VLN L AY +G+I
Sbjct: 23 RFRLPPPE-KLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIR 81
Query: 443 WALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXX 502
+L +F L + I+ NG Q + LL++ + PN +
Sbjct: 82 HSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS 141
Query: 503 XXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNA 562
GK +H ++L+ G + + LV +YAK G + + VF+ M +R +S A
Sbjct: 142 TKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTA 197
Query: 563 LISA-------------------------------YAQHGQGKEAVCCFEAMQISPGIEP 591
+I+ YAQHG +A+ F+ + +P
Sbjct: 198 MITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKP 257
Query: 592 DHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA 648
D T LSACS +G ++ G R + V +V + ++D+ + G LEEA
Sbjct: 258 DEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEA 313
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 188/658 (28%), Positives = 296/658 (44%), Gaps = 75/658 (11%)
Query: 99 NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNV 158
N++L+ Y K + F E+ + SWT ML+A G DA++LFD+MP R NV
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPER-NV 169
Query: 159 AVWNAIITRCGADNGHDDVAFDLF-----RDMQKIGVRPDGYTFTSMLSLCSVELLDFGR 213
WN ++T NG + A +F RD+ GY + +LL FG
Sbjct: 170 VSWNTLVTGL-IRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGME--EAKLL-FGD 225
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVR 273
V+ S++ Y G V +AY++F E+ R+ V++ AMI G
Sbjct: 226 MSEKNVV---------TWTSMVYGYCRYGDVREAYRLFCEMPE--RNIVSWTAMISGFAW 274
Query: 274 VDRNEDAFVMFRDMQKA--CFSPMEATFVSVMSSCSSL-----RVGCQAQAQSIKTGF-- 324
+ +A ++F +M+K SP T +S+ +C L R+G Q AQ I G+
Sbjct: 275 NELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWET 334
Query: 325 -DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
D + + + MY+ G + AQ++ E DL S NI+I+ + +
Sbjct: 335 VDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKN----------- 381
Query: 384 KMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINW 443
G L A + V+ +H +S S+I Y G ++
Sbjct: 382 --------------GDLERAETLFERVKSLHDKVS---------WTSMIDGYLEAGDVSR 418
Query: 444 ALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXX 503
A +F L K ++W +ISG + N + S ++ LKP
Sbjct: 419 AFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGA 478
Query: 504 XXXXXHGKQVHGYILRHG--FSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWN 561
GK +H I + + ++ L N+LV+MYAKCG+++ + +F MV++DT+SWN
Sbjct: 479 TSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWN 538
Query: 562 ALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVN 621
++I + HG +A+ F+ M + G +P+ TF VLSACSH GL+ G +F M
Sbjct: 539 SMIMGLSHHGLADKALNLFKEM-LDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE 597
Query: 622 IYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLR--- 678
Y P +DH+ ++DLLGR+G L+EAE I F + + +L C + +
Sbjct: 598 TYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAE 657
Query: 679 -LGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ A LLE D N +V L N+ A G+ + +R M G K PGCSW+
Sbjct: 658 GIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWV 715
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 187/481 (38%), Gaps = 96/481 (19%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
RH+ + + G + R SL++ Y G +D +V EV R+ VT NAM+ G V
Sbjct: 62 RHLLDKIPQRGSINRVVYWTSLLSKYAKTG-YLDEARVLFEVMPE-RNIVTCNAMLTGYV 119
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC-QAQAQSIKTGFDAYTAVN 331
+ R +A+ +FR+M K +V+S L C +++ FD N
Sbjct: 120 KCRRMNEAWTLFREMPK-----------NVVSWTVMLTALCDDGRSEDAVELFDEMPERN 168
Query: 332 ----NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
N +T G + +A+ +F+ M RD+VSWN MI + + + E A L + M
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS- 227
Query: 388 VGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQI 447
E + T+ S++ YCR G + A ++
Sbjct: 228 ---EKNVVTW-------------------------------TSMVYGYCRYGDVREAYRL 253
Query: 448 FSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN--TPLKPNAYXXXXXXXXXXXXX 505
F +P ++++SW +ISGF N + L F + + PN
Sbjct: 254 FCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG 313
Query: 506 XXXH--GKQVHGYILRHGFSS---EISLGNALVTMYAKCGSL------------------ 542
G+Q+H ++ +G+ + + L +LV MYA G +
Sbjct: 314 VEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNI 373
Query: 543 -------DGSLGVFNAMVKR-----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIE 590
+G L + +R D +SW ++I Y + G A F+ + +
Sbjct: 374 IINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH-----D 428
Query: 591 PDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAER 650
D T+T+++S L + + MV G P +S ++ G + L++ +
Sbjct: 429 KDGVTWTVMISGLVQNELFAEAASLLSDMVRC-GLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 651 L 651
+
Sbjct: 488 I 488
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/547 (29%), Positives = 267/547 (48%), Gaps = 25/547 (4%)
Query: 205 SVELLDFGRHVHSVVIRS------GFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
S + GR VH+ ++++ FLA N LI MY A V A
Sbjct: 18 SASSMRLGRVVHARIVKTLDSPPPPFLA-----NYLINMYSKLDHPESARLVLRLTPA-- 70
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQA 315
R+ V++ ++I GL + A V F +M++ P + TF + +SLR+ G Q
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
A ++K G V + MY ++A+ +F+ + ER+L +WN IS +
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDS---LQVVEMVHSLLSKIGL-MKVEVLNSL 431
AI +++ RR+ P+ T+ + L A L + +H L+ + G V V N L
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 432 IAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
I Y + +I + IF+ + K+ +SW ++++ ++ N + + ++ +
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 492 YXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNA 551
+ G+ +H + ++ I +G+ALV MY KCG ++ S F+
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 552 MVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISP---GIEPDHATFTIVLSACSHVGL 608
M +++ ++ N+LI YA GQ A+ FE M +P G P++ TF +LSACS G
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEM--APRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 609 VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLF 668
V++G +IFD M + YG P +H+SCIVD+LGR+G +E A IK ++ +L
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 669 SACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTK 728
+AC HG +LG + A L + D + +VLLSN AAAG+W EA +R+ ++ G K
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 729 QPGCSWI 735
G SWI
Sbjct: 549 GAGYSWI 555
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 211/477 (44%), Gaps = 55/477 (11%)
Query: 17 SEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATAT 76
+ ++ L++ L ++ + +L F ++ + P+ +T A A A+ R T
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV-PNDFTFPCAFKAVASLRLPVT-- 126
Query: 77 TFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
G Q+HA A++ G V S +Y K
Sbjct: 127 --GKQIHALAVKCGRILDVFVGCSAFDMYCK----------------------------- 155
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYT 196
TRL DA KLFD++P R N+ WNA I+ D G A + F + ++I P+ T
Sbjct: 156 TRLRD--DARKLFDEIPER-NLETWNAFISNSVTD-GRPREAIEAFIEFRRIDGHPNSIT 211
Query: 197 FTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
F + L+ CS L L+ G +H +V+RSGF SV N LI Y C + + +F E+
Sbjct: 212 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM- 270
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVG 312
G ++ V++ +++ V+ +E A V++ +K + SV+S+C + L +G
Sbjct: 271 -GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG 329
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
A ++K + V +A + MY G + +++ F+ M E++LV+ N +I + +
Sbjct: 330 RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 389
Query: 373 NLNETAILTYLKM--RRVGIEPDEFTYGSLLGASDSLQVVE----MVHSLLSKIGLMK-V 425
+ A+ + +M R G P+ T+ SLL A VE + S+ S G+
Sbjct: 390 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA 449
Query: 426 EVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL 482
E + ++ R G + A + +P + IS + G L N C + G Q L
Sbjct: 450 EHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS----VWGALQNACRMHGKPQLGLL 502
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/536 (23%), Positives = 232/536 (43%), Gaps = 36/536 (6%)
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRL 139
N + A ++R G H+ + +L S P + +++ ++L
Sbjct: 15 NAISASSMRLGRVVHARIVKTLDS-------------------PPPPFLANYLINMYSKL 55
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT- 198
H A + P R NV W ++I+ A NGH A F +M++ GV P+ +TF
Sbjct: 56 DHPESARLVLRLTPAR-NVVSWTSLISGL-AQNGHFSTALVEFFEMRREGVVPNDFTFPC 113
Query: 199 SMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
+ ++ S+ L G+ +H++ ++ G + V S MY DA ++F E+
Sbjct: 114 AFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE-- 171
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQA 315
R+ T+NA I V R +A F + ++ P TF + +++CS L +G Q
Sbjct: 172 RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL 231
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
+++GFD +V N + Y ++ ++ IF M ++ VSW +++ + Q + +
Sbjct: 232 HGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHED 291
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSL 431
E A + YL+ R+ +E +F S+L A + +E+ S+ + VE V ++L
Sbjct: 292 EKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSAL 351
Query: 432 IAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFS--ALLNTPLKP 489
+ Y + G I + Q F +P K+L++ N++I G+ G L F A P
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP 411
Query: 490 NAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISLGNALVTMYAKCGSLDGSLGV 548
N +G ++ + +G + +V M + G ++ +
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEF 471
Query: 549 FNAMVKRDTIS-WNALISAYAQHGQGKEAVCCFEAM-QISPGIEPDHATFTIVLSA 602
M + TIS W AL +A HG+ + + E + ++ P +H + +A
Sbjct: 472 IKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAA 527
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 232 bits (592), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/536 (27%), Positives = 268/536 (50%), Gaps = 17/536 (3%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
+ H +++ G + N L+ Y DA ++F E+ LR+ VT+N +I G++
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMP--LRNIVTWNILIHGVI 113
Query: 273 RVD--RNEDAFVMFRDMQKACFSPMEATFVSVM------SSCSSLRVGCQAQAQSIKTGF 324
+ D N A + F + + F+ + VS M + ++++ G Q +K G
Sbjct: 114 QRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGL 173
Query: 325 DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETA--ILTY 382
++ + + + Y G + EA+ +FE + +RDLV WN ++S + + + A +L
Sbjct: 174 ESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKL 233
Query: 383 LKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRI 441
+ + D FT+ SLL A ++ + +H++L K+ + V +L+ Y ++ +
Sbjct: 234 MGSDKNRFRGDYFTFSSLLSAC-RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHL 292
Query: 442 NWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXX 501
+ A + F ++ ++++SWN +I GF NG + + F +L L+P+
Sbjct: 293 SDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSC 352
Query: 502 XXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWN 561
KQV + + G + +S+ N+L++ Y++ G+L +L F+++ + D +SW
Sbjct: 353 AKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWT 412
Query: 562 ALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVN 621
++I A A HG +E++ FE+M ++PD TF VLSACSH GLV +G R F M
Sbjct: 413 SVIGALASHGFAEESLQMFESML--QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Query: 622 IYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGR 681
Y +H++C++DLLGR+G+++EA ++ +++ + C H +
Sbjct: 471 FYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMK 530
Query: 682 MVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDM-MREFGTTKQPGCSWIG 736
A+ LLE + P Y +LSN + G W +AA LR R K PGCSW+G
Sbjct: 531 WGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWLG 586
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 185/371 (49%), Gaps = 18/371 (4%)
Query: 132 MLSASTRLGHVGDALKLFDQMPNRSNVAVWN----AIITRCGADNGHDDVAFDLFRDMQK 187
+L A T++ DA KLFD+MP R N+ WN +I R G N + F +
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLR-NIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILF 135
Query: 188 IGVRPDGYTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
V D +F ++ LC+ + G +H ++++ G + SL+ Y CG +V+
Sbjct: 136 TDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVE 195
Query: 247 AYQVFGEVEAGL-RDHVTYNAMIDGLVRVDRNEDAFVMFRDM--QKACFSPMEATFVSVM 303
A +VF EA L RD V +NA++ V ++AF + + M K F TF S++
Sbjct: 196 ARRVF---EAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLL 252
Query: 304 SSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
S+C + G Q A K + V A + MY+ +++A+ FE M R++VSWN
Sbjct: 253 SAC-RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWN 311
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQV---VEMVHSLLSKI 420
MI F Q A+ + +M ++PDE T+ S+L + ++ V ++++K
Sbjct: 312 AMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKK 371
Query: 421 GLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQF 479
G + V NSLI++Y RNG ++ AL F ++ L+SW ++I ++G + L+ F
Sbjct: 372 GSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMF 431
Query: 480 SALLNTPLKPN 490
++L L+P+
Sbjct: 432 ESMLQ-KLQPD 441
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 112/257 (43%), Gaps = 45/257 (17%)
Query: 52 LRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDL 111
R D++T S+ ++A + G Q+HA + + VA +LL++YAK+
Sbjct: 241 FRGDYFTFSSLLSACRIEQ--------GKQIHAILFKVSYQFDIPVATALLNMYAKS--- 289
Query: 112 ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD 171
H+ DA + F+ M R NV WNA+I A
Sbjct: 290 ----------------------------NHLSDARECFESMVVR-NVVSWNAMIVGF-AQ 319
Query: 172 NGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSV 230
NG A LF M ++PD TF S+LS C+ + + V ++V + G SV
Sbjct: 320 NGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSV 379
Query: 231 VNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
NSLI+ Y G + +A F + D V++ ++I L E++ MF M +
Sbjct: 380 ANSLISSYSRNGNLSEALLCFHSIREP--DLVSWTSVIGALASHGFAEESLQMFESMLQK 437
Query: 291 CFSPMEATFVSVMSSCS 307
P + TF+ V+S+CS
Sbjct: 438 -LQPDKITFLEVLSACS 453
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFG 79
++ N ++ ++ + E+++LF Q+ L+PD T ++ +++ A +A
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQM-LLENLQPDELTFASVLSSCAKF----SAIWEI 361
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRL 139
Q+ A + G VANSL+S Y++ +L+ F I PD SWT+++ A
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASH 421
Query: 140 GHVGDALKLFDQMPNR--SNVAVWNAIITRCGADNGHDDVAFDLFRDMQ---KIGVRPDG 194
G ++L++F+ M + + + +++ C + G F+ M KI +
Sbjct: 422 GFAEESLQMFESMLQKLQPDKITFLEVLSAC-SHGGLVQEGLRCFKRMTEFYKIEAEDEH 480
Query: 195 YTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTS-VVNSLIT 236
YT C ++LL R+GF+ S V+NS+ T
Sbjct: 481 YT-------CLIDLLG----------RAGFIDEASDVLNSMPT 506
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 156/528 (29%), Positives = 249/528 (47%), Gaps = 14/528 (2%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
+ +H+ +IR + LI+ C A +VF +V+ H+ N++I
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEP-NVHLC-NSLIRAHA 93
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTA 329
+ + AF +F +MQ+ T+ ++ +CS L V K G +
Sbjct: 94 QNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIY 153
Query: 330 VNNATMTMYS-CFG-KVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
V NA + YS C G V +A +FE+M ERD VSWN M+ + A + +M
Sbjct: 154 VPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMP- 212
Query: 388 VGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQI 447
+ D ++ ++L + + L K+ ++++ Y + G + A +
Sbjct: 213 ---QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVM 269
Query: 448 FSN--LPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXX 505
F LP K++++W II+G+ G + ++ + LK +A
Sbjct: 270 FDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESG 329
Query: 506 XXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALIS 565
G ++H + R S + NAL+ MYAKCG+L + VFN + K+D +SWN ++
Sbjct: 330 LLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLH 389
Query: 566 AYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGF 625
HG GKEA+ F M+ GI PD TF VL +C+H GL+D+G F M +Y
Sbjct: 390 GLGVHGHGKEAIELFSRMR-REGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 626 VPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVAR 685
VP V+H+ C+VDLLGR G L+EA ++++ N I +L AC H + + + V
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
Query: 686 LLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCS 733
L++ D +P Y LLSNI AAA WE A++R M+ G K G S
Sbjct: 509 NLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGAS 556
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 224/506 (44%), Gaps = 55/506 (10%)
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRL 139
QLHA IR L H+A L+S + R F +++ P
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEP--------------- 80
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTS 199
NV + N++I R A N AF +F +MQ+ G+ D +T+
Sbjct: 81 -----------------NVHLCNSLI-RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPF 122
Query: 200 MLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCG--CVVDAYQVFGEVEA 256
+L CS + L + +H+ + + G + V N+LI Y CG V DA ++F ++
Sbjct: 123 LLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE 182
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSLRVGCQA 315
RD V++N+M+ GLV+ DA +F +M Q+ S T + + C + +
Sbjct: 183 --RDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLIS--WNTMLDGYARCREM-----S 233
Query: 316 QAQSIKTGFDAYTAVNNATMTM-YSCFGKVNEAQNIFERM--EERDLVSWNIMISMFFQE 372
+A + V+ +TM M YS G + A+ +F++M +++V+W I+I+ + ++
Sbjct: 234 KAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEK 293
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGL-MKVEVL 428
L + A +M G++ D S+L A S L + +HS+L + L VL
Sbjct: 294 GLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVL 353
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
N+L+ Y + G + A +F+++P K L+SWNT++ G +G + +E FS + ++
Sbjct: 354 NALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIR 413
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISLGNALVTMYAKCGSLDGSLG 547
P+ G + + + ++ LV + + G L ++
Sbjct: 414 PDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIK 473
Query: 548 VFNAM-VKRDTISWNALISAYAQHGQ 572
V M ++ + + W AL+ A H +
Sbjct: 474 VVQTMPMEPNVVIWGALLGACRMHNE 499
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 156/344 (45%), Gaps = 29/344 (8%)
Query: 99 NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMP-NRSN 157
N++L YA+ +++ F ++ + SW+TM+ ++ G + A +FD+MP N
Sbjct: 220 NTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN 279
Query: 158 VAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVE-LLDFGRHVH 216
V W II A+ G A L M G++ D S+L+ C+ LL G +H
Sbjct: 280 VVTWTIIIAGY-AEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 217 SVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDR 276
S++ RS + V+N+L+ MY CG + A+ VF ++ +D V++N M+ GL
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK--KDLVSWNTMLHGLGVHGH 396
Query: 277 NEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNN---- 332
++A +F M++ P + TF++V+ SC+ A I G D + ++
Sbjct: 397 GKEAIELFSRMRREGIRPDKVTFIAVLCSCN--------HAGLIDEGIDYFYSMEKVYDL 448
Query: 333 -ATMTMYSCF-------GKVNEAQNIFERME-ERDLVSWNIMISMFFQENLNETAILTYL 383
+ Y C G++ EA + + M E ++V W ++ NE I +
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMH--NEVDIAKEV 506
Query: 384 KMRRVGIEP-DEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE 426
V ++P D Y L + + E V + SK+ M VE
Sbjct: 507 LDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVE 550
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 162/385 (42%), Gaps = 52/385 (13%)
Query: 303 MSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSW 362
+ C++L Q AQ I+ + ++ S + N A +F +++E ++
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 363 NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS---LQVVEMVHSLLSK 419
N +I Q + A + +M+R G+ D FTY LL A L VV+M+H+ + K
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 420 IGL-MKVEVLNSLIAAYCRNG--RINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGL 476
+GL + V N+LI Y R G + A+++F + + +SWN+++ G + G
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 477 EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMY 536
F + L IS N ++ Y
Sbjct: 206 RLFDEMPQRDL--------------------------------------ISW-NTMLDGY 226
Query: 537 AKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATF 596
A+C + + +F M +R+T+SW+ ++ Y++ G + A F+ M P + T+
Sbjct: 227 ARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKM---PLPAKNVVTW 283
Query: 597 TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAER---LIK 653
TI+++ + GL+ + R+ D MV G I+ SG L R ++K
Sbjct: 284 TIIIAGYAEKGLLKEADRLVDQMV-ASGLKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 654 GGYFGANSNICWSLFSACAAHGNLR 678
G+N+ + +L A GNL+
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLK 367
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 45/185 (24%)
Query: 77 TFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
+ G ++H+ R+ L ++++V N+LL +YAK +L F +I D SW TML
Sbjct: 332 SLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGL 391
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYT 196
GH +A++LF + M++ G+RPD T
Sbjct: 392 GVHGHGKEAIELFSR---------------------------------MRREGIRPDKVT 418
Query: 197 FTSMLSLCSVELLDFGRHVHSVVIRSG--FLARTSVVNSLITMYFNCGCVVDAYQVFGEV 254
F ++L C+ H+ +I G + V L+ + GC+VD G +
Sbjct: 419 FIAVLCSCN----------HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRL 468
Query: 255 EAGLR 259
+ ++
Sbjct: 469 KEAIK 473
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 276/557 (49%), Gaps = 45/557 (8%)
Query: 189 GVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA 247
G +PD +L + + + R +H V + GF++ T + NSL+ Y + DA
Sbjct: 50 GEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDA 109
Query: 248 YQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
++VF E+ D +++N+++ G V+ R ++ +F ++ ++ P E +F + +++C+
Sbjct: 110 HKVFDEMPDP--DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACA 167
Query: 308 SLRV---GCQAQAQSIKTGFD-AYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
L + G ++ +K G + V N + MY G +++A +F+ MEE+D VSWN
Sbjct: 168 RLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWN 227
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM 423
+++ + E + + +M PD TY
Sbjct: 228 AIVASCSRNGKLELGLWFFHQMP----NPDTVTY-------------------------- 257
Query: 424 KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALL 483
N LI A+ ++G N A Q+ S++P + SWNTI++G++ + + E F+ +
Sbjct: 258 -----NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 484 NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLD 543
++ ++ + Y G +H + G S + + +AL+ MY+KCG L
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLK 372
Query: 544 GSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
+ +F M +++ I WN +IS YA++G EA+ F ++ ++PD TF +L+ C
Sbjct: 373 HAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC 432
Query: 604 SHVGL-VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSN 662
SH + ++ F+MM+N Y PSV+H ++ +G+ G + +A+++I+ FG +
Sbjct: 433 SHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGV 492
Query: 663 ICWSLFSACAAHGNLRLGRMVARLLLE--KDHNNPSVYVLLSNICAAAGQWEEAANLRDM 720
+L AC+A +L+ + VA ++E + +Y+++SN+ A +W E +R +
Sbjct: 493 AWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKI 552
Query: 721 MREFGTTKQPGCSWIGT 737
MRE G K+ G SWI +
Sbjct: 553 MRESGVLKEVGSSWIDS 569
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 458 SWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYI 517
SW+TI+ G + L L+N KP+A +Q+HGY+
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 518 LRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAV 577
+HGF S L N+L+ Y SL+ + VF+ M D ISWN+L+S Y Q G+ +E +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 578 CCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVD 637
C F + S + P+ +FT L+AC+ + L G I +V + +V +C++D
Sbjct: 142 CLFLELHRS-DVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 638 LLGRSGYLEEAERLIKGGYFGANSNICW-SLFSACAAHGNLRLG 680
+ G+ G++++A + + + + W ++ ++C+ +G L LG
Sbjct: 201 MYGKCGFMDDAVLVFQ--HMEEKDTVSWNAIVASCSRNGKLELG 242
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 195/487 (40%), Gaps = 116/487 (23%)
Query: 53 RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLA 112
+PD L + S N + QLH + + G +++ ++NSL+ Y ++ L
Sbjct: 52 KPDASPLVHLLRVSGNY----GYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLE 107
Query: 113 SVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADN 172
DA K+FD+MP+ +V WN++++ +
Sbjct: 108 -------------------------------DAHKVFDEMPD-PDVISWNSLVSGY-VQS 134
Query: 173 GHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVV 231
G LF ++ + V P+ ++FT+ L+ C+ + L G +HS +++ G VV
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 232 -NSLITMYFNCGCVVDAYQVF---------------------GEVEAGL--------RDH 261
N LI MY CG + DA VF G++E GL D
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDT 254
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPM--------------EAT-FVSVMSSC 306
VTYN +ID V+ +AF + DM S EAT F + M S
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS 314
Query: 307 S------SLRV-------------GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
SL + G A + K G D+ V +A + MYS G + A
Sbjct: 315 GVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHA 374
Query: 348 QNIFERMEERDLVSWNIMISMFFQ--ENLNETAILTYLKMRRVGIEPDEFTYGSLLGASD 405
+ +F M ++L+ WN MIS + + +++ + LK R ++PD FT+ +LL
Sbjct: 375 ELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERF-LKPDRFTFLNLLAVCS 433
Query: 406 SLQVVEMVHSLLSKIGLM--------KVEVLNSLIAAYCRNGRINWALQIFSNLPYK-SL 456
+V V +L +M VE SLI A + G + A Q+ +
Sbjct: 434 HCEVPMEV--MLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDG 491
Query: 457 ISWNTII 463
++W ++
Sbjct: 492 VAWRALL 498
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 193/457 (42%), Gaps = 54/457 (11%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFG 79
++ N L++ +S + E + LF ++H S P+ ++ + A+ A A + G
Sbjct: 121 VISWNSLVSGYVQSGRFQEGICLFLELHRSDVF-PNEFSFTAALAACARLH----LSPLG 175
Query: 80 NQLHAHAIRTGL-KAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
+H+ ++ GL K + V N L+ +Y K + F +E D SW ++++ +R
Sbjct: 176 ACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSR 235
Query: 139 LGHVGDALKLFDQMPN------------------------------RSNVAVWNAIITRC 168
G + L F QMPN N + WN I+T
Sbjct: 236 NGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILT-- 293
Query: 169 GADNGHDD-VAFDLFRDMQKIGVRPDGYTFT-SMLSLCSVELLDFGRHVHSVVIRSGFLA 226
G N A + F M GVR D Y+ + + ++ ++ ++ +G +H+ + G +
Sbjct: 294 GYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDS 353
Query: 227 RTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRD 286
R V ++LI MY CG + A +F + ++ + +N MI G R + +A +F
Sbjct: 354 RVVVASALIDMYSKCGMLKHAELMFWTMPR--KNLIVWNEMISGYARNGDSIEAIKLFNQ 411
Query: 287 MQKACF-SPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNAT--MTMYSCFGK 343
+++ F P TF+++++ CS V + + + Y + ++ G+
Sbjct: 412 LKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQ 471
Query: 344 VNEAQNIFERMEE----RDLVSWNIMISMFFQENLNETAILTYLKMRRVG-IEPDEFTY- 397
E + ++E D V+W ++ + A KM +G + DE+ Y
Sbjct: 472 RGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYI 531
Query: 398 --GSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLI 432
+L + + V + ++ + G++K EV +S I
Sbjct: 532 VMSNLYAYHERWREVGQIRKIMRESGVLK-EVGSSWI 567
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 231 bits (589), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 230/470 (48%), Gaps = 34/470 (7%)
Query: 298 TFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER 357
T +SV+ SC ++ A+ I+T D V + + S V+ A ++F +
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 90
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLL 417
++ + MI F + + Y +M + PD + S+L A D L+V +H+ +
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD-LKVCREIHAQV 149
Query: 418 SKIG----------LMKV-----EVLNS-----------------LIAAYCRNGRINWAL 445
K+G +M++ E++N+ +I Y G I AL
Sbjct: 150 LKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEAL 209
Query: 446 QIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXX 505
++F ++ K + W +I G + N + LE F + + N +
Sbjct: 210 ELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLG 269
Query: 506 XXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALIS 565
G+ VH ++ +GNAL+ MY++CG ++ + VF M +D IS+N +IS
Sbjct: 270 ALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMIS 329
Query: 566 AYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGF 625
A HG EA+ F M ++ G P+ T +L+ACSH GL+D G +F+ M ++
Sbjct: 330 GLAMHGASVEAINEFRDM-VNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNV 388
Query: 626 VPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVAR 685
P ++H+ CIVDLLGR G LEEA R I+ + + +L SAC HGN+ LG +A+
Sbjct: 389 EPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAK 448
Query: 686 LLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
L E ++ + YVLLSN+ A++G+W+E+ +R+ MR+ G K+PGCS I
Sbjct: 449 RLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTI 498
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 182/444 (40%), Gaps = 103/444 (23%)
Query: 82 LHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGH 141
+HA IRT + V L+ + + + + F+ + P+ Y +T M+ G
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 142 VGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML 201
D + L+ +M + S V PD Y TS+L
Sbjct: 108 SADGVSLYHRMIHNS---------------------------------VLPDNYVITSVL 134
Query: 202 SLCSVELLDFGRHVHSVVIRSGFLARTSV--------------VNS-------------- 233
C +++ R +H+ V++ GF + SV VN+
Sbjct: 135 KACDLKVC---REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVA 191
Query: 234 ---LITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
+I Y CG + +A ++F +V+ ++D V + AMIDGLVR A +FR+MQ
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVK--IKDTVCWTAMIDGLVRNKEMNKALELFREMQME 249
Query: 291 CFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
S E T V V+S+CS +L +G + + V NA + MYS G +NEA
Sbjct: 250 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 309
Query: 348 QNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
+ +F M ++D++S+N MIS + AI + M G P++ T +LL A
Sbjct: 310 RRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACS-- 367
Query: 408 QVVEMVHSLLSKIGLMKVEVLNSLIAAY----------C------RNGRINWALQIFSNL 451
H L IGL EV NS+ + C R GR+ A + N+
Sbjct: 368 ------HGGLLDIGL---EVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI 418
Query: 452 PYKSLISWNTIISGFLTNGCPLQG 475
P I + I+ G L + C + G
Sbjct: 419 P----IEPDHIMLGTLLSACKIHG 438
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 177/398 (44%), Gaps = 60/398 (15%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQ-IHSSHTLRPDHYTLSTAITASANTRPAA 73
+S+ + ++ S + + + L+ + IH+S + PD+Y +++ + A
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNS--VLPDNYVITSVLKA-------- 136
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
++HA ++ G + V ++ +Y K+ +L + ++ F E+ D + T M+
Sbjct: 137 CDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMI 196
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
+ + G + +AL+LF + + V W A+I N + A +LFR+MQ V +
Sbjct: 197 NCYSECGFIKEALELFQDVKIKDTVC-WTAMIDGL-VRNKEMNKALELFREMQMENVSAN 254
Query: 194 GYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
+T +LS CS + L+ GR VHS V V N+LI MY CG + +A +VF
Sbjct: 255 EFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR 314
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---L 309
+ +D ++YN MI GL + +A FRDM F P + T V+++++CS L
Sbjct: 315 VMRD--KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLL 372
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSC----FGKVNEAQNIFERMEERDLVSWNIM 365
+G + S+K F+ + + Y C G+V R+EE
Sbjct: 373 DIGLEV-FNSMKRVFNVEPQIEH-----YGCIVDLLGRVG-------RLEE--------- 410
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
Y + + IEPD G+LL A
Sbjct: 411 ---------------AYRFIENIPIEPDHIMLGTLLSA 433
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 170/613 (27%), Positives = 279/613 (45%), Gaps = 48/613 (7%)
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFR 183
P + + A + G V DA +LF++MP R WNA+IT C A NG D F +FR
Sbjct: 94 PPIFLLNRAIEAYGKCGCVDDARELFEEMPERDG-GSWNAVITAC-AQNGVSDEVFRMFR 151
Query: 184 DMQKIGVRPDGYTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCG 242
M + GVR +F +L C + L L R +H V++ G+ + S++ +Y C
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 243 CVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSV 302
+ DA +VF E+ V++N ++ + + N++A VMF M + P+ T SV
Sbjct: 212 VMSDARRVFDEIVNP--SDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSV 269
Query: 303 MSSCS---SLRVGCQAQAQSIKTG-----------FDAYTAVNN---------------- 332
M +CS +L VG A ++K FD Y +
Sbjct: 270 MLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDL 329
Query: 333 ----ATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRV 388
+ M+ Y+ G EA+ +F+ M ER++VSWN M+ + + + A L +L + R
Sbjct: 330 KSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEA-LDFLTLMRQ 388
Query: 389 GIEP-DEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINW 443
IE D T +L + V+M H + + G V V N+L+ Y + G +
Sbjct: 389 EIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQS 448
Query: 444 ALQIFSNL-PYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXX 502
A F + + +SWN +++G G Q L F + KP+ Y
Sbjct: 449 ANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCA 507
Query: 503 XXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNA 562
GK +HG+++R G+ ++ + A+V MY+KC D ++ VF RD I WN+
Sbjct: 508 NIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNS 567
Query: 563 LISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNI 622
+I ++G+ KE F ++ + G++PDH TF +L AC G V+ G + F M
Sbjct: 568 IIRGCCRNGRSKEVFELFMLLE-NEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTK 626
Query: 623 YGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRM 682
Y P V+H+ C+++L + G L + E + F + + AC + +LG
Sbjct: 627 YHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAW 686
Query: 683 VARLLLEKDHNNP 695
A+ L+ + P
Sbjct: 687 AAKRLMNDHYLQP 699
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 197/412 (47%), Gaps = 19/412 (4%)
Query: 52 LRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDL 111
+RP ++T+S+ + A + + A G +HA A++ + A + V+ S+ +Y K + L
Sbjct: 259 VRPLNHTVSSVMLACSRS----LALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRL 314
Query: 112 ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD 171
S R F + D SWT+ +S G +A +LFD MP R N+ WNA++ G
Sbjct: 315 ESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER-NIVSWNAMLG--GYV 371
Query: 172 NGHD-DVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTS 229
+ H+ D A D M++ D T +L++CS + + G+ H + R G+
Sbjct: 372 HAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVI 431
Query: 230 VVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK 289
V N+L+ MY CG + A F ++ + LRD V++NA++ G+ RV R+E A F MQ
Sbjct: 432 VANALLDMYGKCGTLQSANIWFRQM-SELRDEVSWNALLTGVARVGRSEQALSFFEGMQV 490
Query: 290 ACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNE 346
P + T ++++ C+ +L +G I+ G+ + A + MYS +
Sbjct: 491 EA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDY 549
Query: 347 AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS 406
A +F+ RDL+ WN +I + ++ ++ + G++PD T+ +L A
Sbjct: 550 AIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIR 609
Query: 407 LQVVEMVHSLLSKIGLM-----KVEVLNSLIAAYCRNGRINWALQIFSNLPY 453
VE+ S + +VE + +I YC+ G ++ + +P+
Sbjct: 610 EGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPF 661
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 196/448 (43%), Gaps = 72/448 (16%)
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
QLH ++ G + + S++ +Y K ++ R F EI P D SW
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWN---------- 232
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSM 200
+I R + G +D A +F M ++ VRP +T +S+
Sbjct: 233 -----------------------VIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSV 269
Query: 201 LSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF-------- 251
+ CS L L+ G+ +H++ ++ +A T V S+ MY C + A +VF
Sbjct: 270 MLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDL 329
Query: 252 --------GEVEAGL-------------RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
G +GL R+ V++NAM+ G V ++A M++
Sbjct: 330 KSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Query: 291 CFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
+ T V +++ CS + ++G QA + G+D V NA + MY G + A
Sbjct: 390 IENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSA 449
Query: 348 QNIFERMEE-RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS 406
F +M E RD VSWN +++ + +E A L++ + +V +P ++T +LL +
Sbjct: 450 NIWFRQMSELRDEVSWNALLTGVARVGRSEQA-LSFFEGMQVEAKPSKYTLATLLAGCAN 508
Query: 407 LQVVEM---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTI 462
+ + + +H L + G + V + +++ Y + ++A+++F + LI WN+I
Sbjct: 509 IPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSI 568
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPN 490
I G NG + E F L N +KP+
Sbjct: 569 IRGCCRNGRSKEVFELFMLLENEGVKPD 596
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 164/387 (42%), Gaps = 38/387 (9%)
Query: 299 FVSVMSSCSSLRVGCQA-QAQSIKTGFDAYTAVN--NATMTMYSCFGKVNEAQNIFERME 355
+ + SCSS + QA + QS F + N + Y G V++A+ +FE M
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 356 ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVVEM 412
ERD SWN +I+ Q +++ + +M R G+ E ++ +L G L+++
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 413 VHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGC 471
+H + K G V++ S++ Y + ++ A ++F + S +SWN I+ +L G
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 472 PLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNA 531
+ + F +L ++P + GK +H ++ ++ + +
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 532 LVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQ------- 584
+ MY KC L+ + VF+ +D SW + +S YA G +EA F+ M
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 585 ----------------------ISPGIEP-DHATFTIVLSACSHVGLVDDGTRIFDMMVN 621
+ IE D+ T +L+ CS + V G + +
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 622 IYGFVPSVDHFSCIVDLLGRSGYLEEA 648
+G+ +V + ++D+ G+ G L+ A
Sbjct: 424 -HGYDTNVIVANALLDMYGKCGTLQSA 449
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 509 HGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYA 568
++V +++ I L N + Y KCG +D + +F M +RD SWNA+I+A A
Sbjct: 79 QARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACA 138
Query: 569 QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT--RIFDMMVNIYGFV 626
Q+G E F M G+ +F VL +C GL+ D R V YG+
Sbjct: 139 QNGVSDEVFRMFRRMN-RDGVRATETSFAGVLKSC---GLILDLRLLRQLHCAVVKYGYS 194
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERL 651
+VD + IVD+ G+ + +A R+
Sbjct: 195 GNVDLETSIVDVYGKCRVMSDARRV 219
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/577 (27%), Positives = 273/577 (47%), Gaps = 33/577 (5%)
Query: 170 ADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTS 229
+DN F+L R + RP ++ EL G+ + + G R
Sbjct: 22 SDNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIG----ELCKVGKIAEARKLFDGLPERDV 77
Query: 230 VV-NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQ 288
V +IT Y G + +A ++F V++ ++ VT+ AM+ G +R + A ++F++M
Sbjct: 78 VTWTHVITGYIKLGDMREARELFDRVDS-RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP 136
Query: 289 KACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCF------- 341
E VS + + AQ+ I + + + + ++
Sbjct: 137 -------ERNVVSW-----NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQR 184
Query: 342 GKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL 401
G+++EA N+FERM RD+VSW M+ + + A + M I ++ +++
Sbjct: 185 GRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMI 240
Query: 402 GASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNT 461
++ L + N++I + RN +N A +F +P K++ISW T
Sbjct: 241 TGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTT 300
Query: 462 IISGFLTNGCPLQGLEQFSALL-NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
+I+G++ N + L FS +L + +KPN G+Q+H I +
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVF-NAMV-KRDTISWNALISAYAQHGQGKEAVC 578
+ +AL+ MY+K G L + +F N +V +RD ISWN++I+ YA HG GKEA+
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIE 420
Query: 579 CFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDL 638
+ M+ G +P T+ +L ACSH GLV+ G F +V +H++C+VDL
Sbjct: 421 MYNQMR-KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDL 479
Query: 639 LGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVY 698
GR+G L++ I + + ++ SAC H + + + V + +LE ++ Y
Sbjct: 480 CGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTY 539
Query: 699 VLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
VL+SNI AA G+ EEAA +R M+E G KQPGCSW+
Sbjct: 540 VLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWV 576
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 162/350 (46%), Gaps = 50/350 (14%)
Query: 100 SLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVA 159
+++S Y +++ L+ E F E+ + SW TM+ + G + AL+LFD+MP R N+
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER-NIV 172
Query: 160 VWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSV 218
WN+++ + G D A +LF M R D ++T+M+ L +D R +
Sbjct: 173 SWNSMV-KALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 219 VIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVR----- 273
+ ++ N++IT Y + +A Q+F + RD ++N MI G +R
Sbjct: 228 MPERNIIS----WNAMITGYAQNNRIDEADQLFQVMPE--RDFASWNTMITGFIRNREMN 281
Query: 274 -----VDR---------------------NEDAFVMFRDM-QKACFSPMEATFVSVMSSC 306
DR NE+A +F M + P T+VS++S+C
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
Query: 307 SSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER--MEERDLVS 361
S L G Q K+ V +A + MYS G++ A+ +F+ + +RDL+S
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLIS 401
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE 411
WN MI+++ + AI Y +MR+ G +P TY +LL A +VE
Sbjct: 402 WNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVE 451
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 197/405 (48%), Gaps = 36/405 (8%)
Query: 101 LLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAV 160
L+ K +A + F + D +WT +++ +LG + +A +LFD++ +R NV
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 161 WNAIITRCGADNGHDDVAFDLFRDMQKIGVRP-----DGYTFTSMLSLCSVELLDFGRHV 215
W A+++ + +A LF++M + V DGY + + ++EL D
Sbjct: 112 WTAMVS-GYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDK-ALELFD----- 164
Query: 216 HSVVIRSGFLARTSVV--NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVR 273
+ ++V NS++ G + +A +F + RD V++ AM+DGL +
Sbjct: 165 --------EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPR--RDVVSWTAMVDGLAK 214
Query: 274 VDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNA 333
+ ++A +F M + A + + R+ Q + D A N
Sbjct: 215 NGKVDEARRLFDCMPERNIISWNAM---ITGYAQNNRIDEADQLFQVMPERD--FASWNT 269
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG-IEP 392
+T + ++N+A +F+RM E++++SW MI+ + + NE A+ + KM R G ++P
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 393 DEFTYGSLLGA-SDSLQVVE--MVHSLLSKIGLMKVEVLNS-LIAAYCRNGRINWALQIF 448
+ TY S+L A SD +VE +H L+SK K E++ S L+ Y ++G + A ++F
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF 389
Query: 449 SN--LPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
N + + LISWN++I+ + +G + +E ++ + KP+A
Sbjct: 390 DNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 229/467 (49%), Gaps = 41/467 (8%)
Query: 260 DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFS-PMEATFVSVMSSCS---SLRVGCQA 315
D +N ++ G D ++ +F +M + F P +F V+ + SLR G Q
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
Q++K G +++ V + MY G V A+ +F+ M + +LV+WN +I+ F+ N
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN-- 186
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAY 435
+ GA + + K+ + N ++A Y
Sbjct: 187 -----------------------DVAGARE----------IFDKMLVRNHTSWNVMLAGY 213
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
+ G + A +IFS +P++ +SW+T+I G NG + F L + PN
Sbjct: 214 IKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLT 273
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMV-K 554
GK +HG++ + G+S +S+ NAL+ MY++CG++ + VF M K
Sbjct: 274 GVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK 333
Query: 555 RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTR 614
R +SW ++I+ A HGQG+EAV F M + G+ PD +F +L ACSH GL+++G
Sbjct: 334 RCIVSWTSMIAGLAMHGQGEEAVRLFNEMT-AYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAH 674
F M +Y P ++H+ C+VDL GRSG L++A I + + +L AC++H
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH 452
Query: 675 GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMM 721
GN+ L V + L E D NN VLLSN A AG+W++ A++R M
Sbjct: 453 GNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSM 499
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 205/478 (42%), Gaps = 89/478 (18%)
Query: 23 LNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQL 82
N L+ + S++ S+ +F ++ + PD ++ + I A N R T G Q+
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT----GFQM 128
Query: 83 HAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHV 142
H A++ GL++H V +L+ +Y G V
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGC-------------------------------GCV 157
Query: 143 GDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS 202
A K+FD+M ++ N+ WNA+IT C FR G R
Sbjct: 158 EFARKVFDEM-HQPNLVAWNAVITAC-------------FRGNDVAGAR----------- 192
Query: 203 LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
E+ D +++R+ + N ++ Y G + A ++F E+ RD V
Sbjct: 193 ----EIFD------KMLVRN-----HTSWNVMLAGYIKAGELESAKRIFSEMPH--RDDV 235
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQS 319
+++ MI G+ ++F+ FR++Q+A SP E + V+S+CS S G
Sbjct: 236 SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFV 295
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE-RDLVSWNIMISMFFQENLNETA 378
K G+ +VNNA + MYS G V A+ +FE M+E R +VSW MI+ E A
Sbjct: 296 EKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
Query: 379 ILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM-----KVEVLNSLIA 433
+ + +M G+ PD ++ SLL A ++E S++ + ++E ++
Sbjct: 356 VRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 434 AYCRNGRINWALQIFSNLPY-KSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
Y R+G++ A +P + I W T++ ++G ++ EQ LN L PN
Sbjct: 416 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHG-NIELAEQVKQRLNE-LDPN 471
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 147/379 (38%), Gaps = 55/379 (14%)
Query: 399 SLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCR---NGRINWALQIFSNLPYKS 455
SLL + +L+ + +H L K G+ + +C + + +A ++ P
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPD 69
Query: 456 LISWNTIISGFLTNGCPLQGLEQFSALLNTPLK-PNAYXXXXXXXXXXXXXXXXHGKQVH 514
+NT++ G+ + P + F ++ P+++ G Q+H
Sbjct: 70 AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMH 129
Query: 515 GYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGK 574
L+HG S + +G L+ MY CG ++ + VF+ M + + ++WNA+I+A +
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVA 189
Query: 575 EAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSC 634
A F+ M + +H ++ ++L+ G ++ RIF M P D S
Sbjct: 190 GAREIFDKMLVR-----NHTSWNVMLAGYIKAGELESAKRIFSEM-------PHRDDVSW 237
Query: 635 IVDLLG--RSGYLEEA---ERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMV------ 683
++G +G E+ R ++ N + SAC+ G+ G+++
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 297
Query: 684 -------------------------ARLLLEKDHNNPSVYVLLSNICAAA--GQWEEAAN 716
ARL+ E + S I A GQ EEA
Sbjct: 298 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Query: 717 LRDMMREFGTTKQPGCSWI 735
L + M +G T G S+I
Sbjct: 358 LFNEMTAYGVTPD-GISFI 375
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 145/459 (31%), Positives = 229/459 (49%), Gaps = 45/459 (9%)
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
A +K G + N + +Y G + A +F+ M RD ++W +++ Q NL+
Sbjct: 26 HAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLS 85
Query: 376 -ETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV------------------EMVHSL 416
+T + G+ PD+F + +L+ A +L + E+V S
Sbjct: 86 GKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSS 145
Query: 417 L----SKIGLMK--------VEVLNS-----LIAAYCRNGRINWALQIFSNLPYKSLISW 459
L +K GL+ + V N+ +++ Y ++GR AL++F LP K+L SW
Sbjct: 146 LVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSW 205
Query: 460 NTIISGFLTNGCPLQGLEQFSALLNTPLKP----NAYXXXXXXXXXXXXXXXXHGKQVHG 515
+ISGF+ +G +GLE FS + + G+QVHG
Sbjct: 206 TALISGFVQSG---KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG 262
Query: 516 YILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKE 575
++ GF S + + NAL+ MYAKC + + +F+ M RD +SW +LI AQHGQ ++
Sbjct: 263 LVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEK 322
Query: 576 AVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCI 635
A+ ++ M +S G++P+ TF ++ ACSHVG V+ G +F M YG PS+ H++C+
Sbjct: 323 ALALYDDM-VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCL 381
Query: 636 VDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLG-RMVARLLLEKDHNN 694
+DLLGRSG L+EAE LI F + +L SAC G ++G R+ L+ +
Sbjct: 382 LDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKD 441
Query: 695 PSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCS 733
PS Y+LLSNI A+A W + + R + E K PG S
Sbjct: 442 PSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 188/445 (42%), Gaps = 81/445 (18%)
Query: 77 TFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
T LHAH ++ G+ +AN+L+++Y K
Sbjct: 20 TTAKALHAHIVKLGIVQCCPLANTLVNVYGKC---------------------------- 51
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYT 196
G AL++FD+MP+R ++A W +++T N G+RPD +
Sbjct: 52 ---GAASHALQVFDEMPHRDHIA-WASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFV 107
Query: 197 FTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
F++++ C+ + +D GR VH I S + V +SL+ MY CG + A VF +
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR 167
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK-----------------------ACF 292
+++ +++ AM+ G + R E+A +FR + + F
Sbjct: 168 --VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVF 225
Query: 293 SPMEATFV---------SVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATMTMYSC 340
+ M V S++ +C++L G Q I GFD+ ++NA + MY+
Sbjct: 226 TEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAK 285
Query: 341 FGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSL 400
V A++IF RM RD+VSW +I Q E A+ Y M G++P+E T+ L
Sbjct: 286 CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGL 345
Query: 401 LGASDSLQVV----EMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPY-K 454
+ A + V E+ S+ G+ ++ L+ R+G ++ A + +P+
Sbjct: 346 IYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPP 405
Query: 455 SLISWNTIISGFLTNGCPLQGLEQF 479
+W ++S C QG Q
Sbjct: 406 DEPTWAALLS-----ACKRQGRGQM 425
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 172/364 (47%), Gaps = 21/364 (5%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
+L L ++N ++L +F+ + SS LRPD + S + A AN + G Q+H H
Sbjct: 75 VLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANL----GSIDHGRQVHCH 130
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
I + V +SL+ +YAK L S + F I + SWT M+S + G +A
Sbjct: 131 FIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEA 190
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP-DGYTFTSMLSLC 204
L+LF +P + N+ W A+I+ +G AF +F +M++ V D +S++ C
Sbjct: 191 LELFRILPVK-NLYSWTALISGF-VQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 205 SVELLDF-GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
+ GR VH +VI GF + + N+LI MY C V+ A +F + RD V+
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRH--RDVVS 306
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTG 323
+ ++I G+ + + E A ++ DM P E TFV ++ +CS VG + + +
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACS--HVGFVEKGRELFQS 364
Query: 324 FDAYTAVNNATMTMYSCF-------GKVNEAQNIFERME-ERDLVSWNIMISMFFQENLN 375
+ ++ Y+C G ++EA+N+ M D +W ++S ++
Sbjct: 365 MTKDYGI-RPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 376 ETAI 379
+ I
Sbjct: 424 QMGI 427
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 180/424 (42%), Gaps = 45/424 (10%)
Query: 197 FTSMLSLCSV-ELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
+ L LC+ L + +H+ +++ G + + N+L+ +Y CG A QVF E+
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAF-VMFRDMQKACFSPMEATFVSVMSSCS---SLRV 311
RDH+ + +++ L + + + V + P + F +++ +C+ S+
Sbjct: 66 H--RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 312 GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFE------------------- 352
G Q I + + V ++ + MY+ G +N A+ +F+
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 353 --RMEE----------RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEP-DEFTYGS 399
R EE ++L SW +IS F Q A + +MRR ++ D S
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 400 LLGASDSLQVV---EMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKS 455
++GA +L VH L+ +G V + N+LI Y + + A IFS + ++
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 456 LISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHG 515
++SW ++I G +G + L + +++ +KPN G+++
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 516 YILR-HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQG 573
+ + +G + L+ + + G LD + + + M D +W AL+SA + G+G
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 574 KEAV 577
+ +
Sbjct: 424 QMGI 427
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 104/191 (54%), Gaps = 6/191 (3%)
Query: 400 LLGASDSLQVVEMVHSLLSKIGLMKV-EVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS 458
L + +L + +H+ + K+G+++ + N+L+ Y + G + ALQ+F +P++ I+
Sbjct: 12 LCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIA 71
Query: 459 WNTIISGFLTNGCPLQG---LEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHG 515
W ++++ N L G S ++ L+P+ + HG+QVH
Sbjct: 72 WASVLTAL--NQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 516 YILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKE 575
+ + ++++ + ++LV MYAKCG L+ + VF+++ ++TISW A++S YA+ G+ +E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 576 AVCCFEAMQIS 586
A+ F + +
Sbjct: 190 ALELFRILPVK 200
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 8/216 (3%)
Query: 510 GKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQ 569
K +H +I++ G L N LV +Y KCG+ +L VF+ M RD I+W ++++A Q
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 570 HGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIF-DMMVNIYGFVPS 628
+ + F ++ S G+ PD F+ ++ AC+++G +D G ++ +V+ Y
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV 141
Query: 629 VDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWS-LFSACAAHGNLRLGRMVARLL 687
V S +VD+ + G L A+ + + I W+ + S A G + R+L
Sbjct: 142 VK--SSLVDMYAKCGLLNSAKAVFDS--IRVKNTISWTAMVSGYAKSGRKEEALELFRIL 197
Query: 688 LEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
K N S L+S + E + +M RE
Sbjct: 198 PVK--NLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 248/513 (48%), Gaps = 42/513 (8%)
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQAQSI 320
YN M+ L +F +++ P T V+ S LR G + ++
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 321 KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAIL 380
K G + + V+N+ M MY+ GK+ +F+ M +RD+VSWN +IS + E AI
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 381 TYLKM-RRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGLMKVEVLNSLIAAYC 436
+ +M + ++ DE T S L A +L+ +E+ ++ + M V + N+L+ +C
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFC 193
Query: 437 R-------------------------------NGRINWALQIFSNLPYKSLISWNTIISG 465
+ GRI+ A +F P K ++ W +++G
Sbjct: 194 KCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNG 253
Query: 466 FLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSE 525
++ + LE F + ++P+ + GK +HGYI + + +
Sbjct: 254 YVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVD 313
Query: 526 ISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQI 585
+G ALV MYAKCG ++ +L VF + +RDT SW +LI A +G A+ + M+
Sbjct: 314 KVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEME- 372
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYL 645
+ G+ D TF VL+AC+H G V +G +IF M + P +H SC++DLL R+G L
Sbjct: 373 NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLL 432
Query: 646 EEAERLI---KGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLS 702
+EAE LI +G + SL SA +GN+++ VA L + + ++ S + LL+
Sbjct: 433 DEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLA 492
Query: 703 NICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
++ A+A +WE+ N+R M++ G K PGCS I
Sbjct: 493 SVYASANRWEDVTNVRRKMKDLGIRKFPGCSSI 525
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 211/486 (43%), Gaps = 80/486 (16%)
Query: 10 MSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANT 69
M+ + + + +L N +L +L T+ L LF ++ L PD++TL + +
Sbjct: 1 MNMSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRG-QGLYPDNFTLPVVLKSIGRL 59
Query: 70 RPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSW 129
R G ++H +A++ GL+ S+V+NSL+ +YA + + F E+ D SW
Sbjct: 60 RKVIE----GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSW 115
Query: 130 TTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG 189
++S+ G DA+ +F +M SN
Sbjct: 116 NGLISSYVGNGRFEDAIGVFKRMSQESN-------------------------------- 143
Query: 190 VRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGC----- 243
++ D T S LS CS ++ L+ G ++ V+ + F + N+L+ M+ CGC
Sbjct: 144 LKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKAR 202
Query: 244 -VVDAYQ----------VFGEVEAG-------------LRDHVTYNAMIDGLVRVDRNED 279
V D+ + VFG V G ++D V + AM++G V+ +R ++
Sbjct: 203 AVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDE 262
Query: 280 AFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSI-----KTGFDAYTAVNNAT 334
A +FR MQ A P VS+++ C+ + G Q + I + V A
Sbjct: 263 ALELFRCMQTAGIRPDNFVLVSLLTGCA--QTGALEQGKWIHGYINENRVTVDKVVGTAL 320
Query: 335 MTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDE 394
+ MY+ G + A +F ++ERD SW +I ++ A+ Y +M VG+ D
Sbjct: 321 VDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDA 380
Query: 395 FTYGSLLGASDSLQVV----EMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFS 449
T+ ++L A + V ++ HS+ + + K E + LI CR G ++ A ++
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 450 NLPYKS 455
+ +S
Sbjct: 441 KMRGES 446
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 11/245 (4%)
Query: 448 FSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXX 507
S L SL+ +N ++ + L F L L P+ +
Sbjct: 3 MSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV 62
Query: 508 XHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAY 567
G++VHGY ++ G + + N+L+ MYA G ++ + VF+ M +RD +SWN LIS+Y
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 568 AQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVP 627
+G+ ++A+ F+ M ++ D T LSACS + ++ G RI+ +V F
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT--EFEM 180
Query: 628 SVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNI-CWSLFSACAAHGNLRLGRM-VAR 685
SV + +VD+ + G L++A + + N+ CW+ G + GR+ AR
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDS---MRDKNVKCWT----SMVFGYVSTGRIDEAR 233
Query: 686 LLLEK 690
+L E+
Sbjct: 234 VLFER 238
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 235/489 (48%), Gaps = 57/489 (11%)
Query: 303 MSSCSSLRVGCQAQAQSIKTG--FDAYTAVNNATMTMYSCF--GKVNEAQNIFERMEERD 358
+++C ++R Q A IK+G D A S ++ A IF +M +R+
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 359 LVSWNIMISMFFQENLNETAI---LTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEM 412
SWN +I F + + ++ I L Y M +EP+ FT+ S+L A + +Q +
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 413 VHSLLSKIG----------LMKVEVL---------------------------------- 428
+H L K G L+++ V+
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 429 --NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
N +I Y R G A +F + +S++SWNT+ISG+ NG +E F +
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSL 546
++PN G+ +H Y G + LG+AL+ MY+KCG ++ ++
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 547 GVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
VF + + + I+W+A+I+ +A HGQ +A+ CF M+ G+ P + +L+ACSH
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYINLLTACSHG 388
Query: 607 GLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWS 666
GLV++G R F MV++ G P ++H+ C+VDLLGRSG L+EAE I + I +
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 667 LFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGT 726
L AC GN+ +G+ VA +L++ ++ YV LSN+ A+ G W E + +R M+E
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
Query: 727 TKQPGCSWI 735
K PGCS I
Sbjct: 509 RKDPGCSLI 517
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 179/386 (46%), Gaps = 61/386 (15%)
Query: 145 ALKLFDQMPNRSNVAVWNAIITRCGADNGHDD--VAFDLFRDMQKIG-VRPDGYTFTSML 201
A K+F+QMP R N WN II R +++ D +A LF +M V P+ +TF S+L
Sbjct: 78 AHKIFNQMPQR-NCFSWNTII-RGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVL 135
Query: 202 SLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE--VEAGL 258
C+ + G+ +H + ++ GF V+++L+ MY CG + DA +F + +E +
Sbjct: 136 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 259 --------RDH--VTYNAMIDGLVRV----------DRN--------------------- 277
RD V +N MIDG +R+ D+
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 278 EDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNAT 334
+DA +FR+M+K P T VSV+ + S SL +G + +G + +A
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSAL 315
Query: 335 MTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDE 394
+ MYS G + +A ++FER+ ++++W+ MI+ F AI + KMR+ G+ P +
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 395 FTYGSLLGASDSLQVVEMVHSLLSKI----GLM-KVEVLNSLIAAYCRNGRINWALQIFS 449
Y +LL A +VE S++ GL ++E ++ R+G ++ A +
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 450 NLPYKSLISWNTIISGFLTNGCPLQG 475
N+P K + +I L C +QG
Sbjct: 436 NMPIKP----DDVIWKALLGACRMQG 457
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 162/394 (41%), Gaps = 63/394 (15%)
Query: 39 SLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVA 98
++ LF ++ S + P+ +T + + A A T G Q+H A++ G V
Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKT----GKIQEGKQIHGLALKYGFGGDEFVM 166
Query: 99 NSLLSLYAKAEDLASVERAFAEIEYPDDYS--------------WTTMLSASTRLGHVGD 144
++L+ +Y + F + D W M+ RLG
Sbjct: 167 SNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKA 226
Query: 145 ALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML-SL 203
A LFD+M RS V+ WN +I+ NG A ++FR+M+K +RP+ T S+L ++
Sbjct: 227 ARMLFDKMRQRSVVS-WNTMISGYSL-NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAI 284
Query: 204 CSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
+ L+ G +H SG + ++LI MY CG + A VF + + +T
Sbjct: 285 SRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR--ENVIT 342
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTG 323
++AMI+G + DA F M++A P + +++++++CS
Sbjct: 343 WSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH--------------- 387
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERD-----LVSWNIMISMFFQENLNETA 378
G V E + F +M D + + M+ + + L + A
Sbjct: 388 -----------------GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 379 ILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM 412
L M I+PD+ + +LLGA VEM
Sbjct: 431 EEFILNM---PIKPDDVIWKALLGACRMQGNVEM 461
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 235/462 (50%), Gaps = 9/462 (1%)
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSI 320
+N MI G D E AF +F ++ + +F++ + SCS + +G ++
Sbjct: 93 FNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIAL 152
Query: 321 KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER-DLVSWNIMISMFFQENLNETAI 379
++GF +T + NA + Y GK+++A+ +F+ M + D V+++ +++ + Q + A+
Sbjct: 153 RSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALAL 212
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGA-SD--SLQVVEMVHSLLSKIGL-MKVEVLNSLIAAY 435
+ MR+ + + T S L A SD L E H L KIGL + + ++ +LI Y
Sbjct: 213 DLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMY 272
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
+ G I+ A +IF K +++WN +I + G + + + +KPN+
Sbjct: 273 GKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFV 332
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
G+ V + + + LG ALV MYAK G L+ ++ +FN M +
Sbjct: 333 GLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDK 392
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISP-GIEPDHATFTIVLSACSHVGLVDDGTR 614
D SW A+IS Y HG +EAV F M+ + P+ TF +VL+ACSH GLV +G R
Sbjct: 393 DVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIR 452
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAH 674
F MV Y F P V+H+ C+VDLLGR+G LEEA LI+ ++S +L +AC +
Sbjct: 453 CFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVY 512
Query: 675 GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAAN 716
GN LG V L E +P+ +LL+ A AG E++ +
Sbjct: 513 GNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLD 554
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 232/464 (50%), Gaps = 20/464 (4%)
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFR 183
DD++ + +L+ S+ L + A +F+ + N +N+ ++N +I R + + + AF +F
Sbjct: 58 KDDFAVSKLLAFSSVL-DIRYASSIFEHVSN-TNLFMFNTMI-RGYSISDEPERAFSVFN 114
Query: 184 DMQKIGVRPDGYTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCG 242
++ G+ D ++F + L CS EL + G +H + +RSGF+ T + N+LI Y CG
Sbjct: 115 QLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCG 174
Query: 243 CVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSV 302
+ DA +VF E+ + D VT++ +++G ++V + A +FR M+K+ +T +S
Sbjct: 175 KISDARKVFDEMPQSV-DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF 233
Query: 303 MSSCSSLRVGCQAQAQS-----IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER 357
+S+ S L G + A+S IK G D + A + MY G ++ A+ IF+ +
Sbjct: 234 LSAISDL--GDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRK 291
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVH 414
D+V+WN MI + + L E + +M+ ++P+ T+ LL + S++ V V
Sbjct: 292 DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA 351
Query: 415 SLLSKIGLMKVEVL-NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPL 473
LL + + +L +L+ Y + G + A++IF+ + K + SW +ISG+ +G
Sbjct: 352 DLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAR 411
Query: 474 QGLEQFSAL--LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISLGN 530
+ + F+ + N ++PN G + ++ + F+ ++
Sbjct: 412 EAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYG 471
Query: 531 ALVTMYAKCGSLDGSLGVF-NAMVKRDTISWNALISAYAQHGQG 573
+V + + G L+ + + N + D+ +W AL++A +G
Sbjct: 472 CVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNA 515
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 198/472 (41%), Gaps = 69/472 (14%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+S+ + N ++ + S++ + +F Q+ + L D ++ T + + +
Sbjct: 85 VSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRA-KGLTLDRFSFITTLKSCSRE----L 139
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
+ G LH A+R+G + + N+L+ Y
Sbjct: 140 CVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVC-------------------------- 173
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDV-----AFDLFRDMQKIG 189
G + DA K+FD+MP + ++ ++ NG+ V A DLFR M+K
Sbjct: 174 -----GKISDARKVFDEMPQSVDAVTFSTLM------NGYLQVSKKALALDLFRIMRKSE 222
Query: 190 VRPDGYTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA 247
V + T S LS S +L D H + I+ G ++ +LI MY G + A
Sbjct: 223 VVVNVSTLLSFLSAIS-DLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSA 281
Query: 248 YQVFGEVEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC 306
++F + +R D VT+N MID + E+ + R M+ P +TFV ++SSC
Sbjct: 282 RRIF---DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSC 338
Query: 307 SSLRVGCQAQA-----QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS 361
+ + + + DA + A + MY+ G + +A IF RM+++D+ S
Sbjct: 339 AYSEAAFVGRTVADLLEEERIALDAI--LGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS 396
Query: 362 WNIMISMFFQENLNETAILTYLKMRR--VGIEPDEFTYGSLLGA-SDSLQVVEMVHSLLS 418
W MIS + L A+ + KM + P+E T+ +L A S V+E +
Sbjct: 397 WTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKR 456
Query: 419 KIGLM----KVEVLNSLIAAYCRNGRINWALQIFSNLPYKS-LISWNTIISG 465
+ KVE ++ R G++ A ++ NLP S +W +++
Sbjct: 457 MVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/559 (27%), Positives = 262/559 (46%), Gaps = 35/559 (6%)
Query: 211 FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV---------------- 254
+ VH+ ++ +GF+ T N + +YF G V++A Q+F ++
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 255 -------------EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
E RD V++N MI GLV +E +F DMQ+ P E TF
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 302 VMSSCSSLRVGCQAQAQSIKTGFDAYT-AVNNATMTMYSCFGKVNEAQNIFERMEERDLV 360
+ S + +R G Q +I +G Y V N+ M MY G + A ++F ME+RD+V
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVV 201
Query: 361 SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLL 417
SWN +I E A+ + MR + I+PDE+T ++ L+ + + +L
Sbjct: 202 SWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALC 261
Query: 418 SKIGLMKVE-VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGL 476
K+G + VL + I + + R++ ++++F L + N++I + + C L
Sbjct: 262 IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDAL 321
Query: 477 EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMY 536
F + ++P+ + HG VH +++ GF + ++ +L+ MY
Sbjct: 322 RLFILAMTQSVRPDKFTFSSVLSSMNAVMLD-HGADVHSLVIKLGFDLDTAVATSLMEMY 380
Query: 537 AKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATF 596
K GS+D ++GVF +D I WN +I A++ + E++ F + ++ ++PD T
Sbjct: 381 FKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTL 440
Query: 597 TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGY 656
+L AC + G V++G +IF M +G P +H++CI++LL R G + EA+ +
Sbjct: 441 MGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIP 500
Query: 657 FGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAAN 716
F +S+I + A G+ RL VA+ +LE + + Y++L I +WE +
Sbjct: 501 FEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVK 560
Query: 717 LRDMMREFGTTKQPGCSWI 735
LR M E G S I
Sbjct: 561 LRYAMNEHKLKSAQGSSKI 579
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/433 (30%), Positives = 213/433 (49%), Gaps = 16/433 (3%)
Query: 67 ANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDD 126
N + + T +HA + G ++ N L LY K+ + + + F +I +
Sbjct: 11 VNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNT 70
Query: 127 YSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQ 186
+W L + G++ +AL LFD+MP R +V WN +I+ G + +F DMQ
Sbjct: 71 ITWNVCLKGLFKNGYLNNALDLFDEMPER-DVVSWNTMISGL-VSCGFHEYGIRVFFDMQ 128
Query: 187 KIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVV--NSLITMYFNCGCV 244
+ +RP +TF+ + SL V + G +H I SG ++R ++V NS++ MY G
Sbjct: 129 RWEIRPTEFTFSILASL--VTCVRHGEQIHGNAICSG-VSRYNLVVWNSVMDMYRRLGVF 185
Query: 245 VDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
A VF +E RD V++N +I E A F M++ P E T V+S
Sbjct: 186 DYALSVFLTMED--RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVS 243
Query: 305 SCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS 361
CS LR G QA A IK GF + + V A + M+S +++++ +F +E+ D V
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM--VHSLLSK 419
N MI + E A+ ++ + PD+FT+ S+L + +++ + VHSL+ K
Sbjct: 304 CNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIK 363
Query: 420 IGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQ 478
+G + V SL+ Y + G ++ A+ +F+ K LI WNT+I G N ++ L
Sbjct: 364 LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAI 423
Query: 479 FSALL-NTPLKPN 490
F+ LL N LKP+
Sbjct: 424 FNQLLMNQSLKPD 436
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 150/349 (42%), Gaps = 51/349 (14%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAA 73
T+ ++ N L+ + + S +L F + ++PD YT+S ++ ++ R +
Sbjct: 194 TMEDRDVVSWNCLILSCSDSGNKEVALDQF-WLMREMEIQPDEYTVSMVVSICSDLRELS 252
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
G Q A I+ G ++S V + + +++K L + F E+E D +M+
Sbjct: 253 K----GKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMI 308
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
+ + W+ CG D A LF VRPD
Sbjct: 309 GSYS-----------------------WHC----CGED------ALRLFILAMTQSVRPD 335
Query: 194 GYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
+TF+S+LS + +LD G VHS+VI+ GF T+V SL+ MYF G V A VF +
Sbjct: 336 KFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAK 395
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRD-MQKACFSPMEATFVSVMSSCSSLRVG 312
+ +D + +N +I GL R R ++ +F + P T + ++ +C G
Sbjct: 396 TDG--KDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACC--YAG 451
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCF-------GKVNEAQNIFERM 354
+ I + + VN Y+C G +NEA++I +++
Sbjct: 452 FVNEGIQIFSSMEKAHGVNPGN-EHYACIIELLCRVGMINEAKDIADKI 499
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 236/464 (50%), Gaps = 16/464 (3%)
Query: 282 VMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMY--- 338
V+ M + C + ++ VS S + LR Q A SI+ G A + Y
Sbjct: 9 VLLLPMVEKCINLLQTYGVS---SITKLR---QIHAFSIRHGVSISDAELGKHLIFYLVS 62
Query: 339 -SCFGKVNEAQNIFERMEER-DLVSWNIMISMFFQENLNETAILTYLKMRRVG-IEPDEF 395
++ A +F ++E+ ++ WN +I + + + +A Y +MR G +EPD
Sbjct: 63 LPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTH 122
Query: 396 TYGSLLGASDSLQVV---EMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNL 451
TY L+ A ++ V E +HS++ + G + V NSL+ Y G + A ++F +
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 452 PYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGK 511
P K L++WN++I+GF NG P + L ++ + + +KP+ + GK
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 512 QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHG 571
+VH Y+++ G + + N L+ +YA+CG ++ + +F+ MV ++++SW +LI A +G
Sbjct: 243 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 572 QGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDH 631
GKEA+ F+ M+ + G+ P TF +L ACSH G+V +G F M Y P ++H
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 632 FSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKD 691
F C+VDLL R+G +++A IK N I +L AC HG+ L +L+ +
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLE 422
Query: 692 HNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
N+ YVLLSN+ A+ +W + +R M G K PG S +
Sbjct: 423 PNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV 466
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 181/360 (50%), Gaps = 21/360 (5%)
Query: 145 ALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG-VRPDGYTFTSML-S 202
A K+F ++ NV +WN +I R A+ G+ AF L+R+M+ G V PD +T+ ++ +
Sbjct: 72 AHKVFSKIEKPINVFIWNTLI-RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 203 LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
+ ++ + G +HSVVIRSGF + V NSL+ +Y NCG V AY+VF ++ +D V
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLV 188
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQS 319
+N++I+G + E+A ++ +M P T VS++S+C+ +L +G +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
IK G +N + +Y+ G+V EA+ +F+ M +++ VSW +I + AI
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 380 LTYLKMRRV-GIEPDEFTYGSLLGASDSLQVV----EMVHSLLSKIGL-MKVEVLNSLIA 433
+ M G+ P E T+ +L A +V E + + + ++E ++
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 434 AYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG---LEQFSALLNTPLKPN 490
R G++ A + ++P + N +I L C + G L +F+ + L+PN
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQP----NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPN 424
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 166/370 (44%), Gaps = 77/370 (20%)
Query: 39 SLKLFTQIHSSHTLRPDHYT---LSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHS 95
+ L+ ++ S + PD +T L A+T A+ R G +H+ IR+G +
Sbjct: 104 AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR-------LGETIHSVVIRSGFGSLI 156
Query: 96 HVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNR 155
+V NSLL LYA D+AS A K+FD+MP +
Sbjct: 157 YVQNSLLHLYANCGDVAS-------------------------------AYKVFDKMPEK 185
Query: 156 SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRH 214
VA WN++I A+NG + A L+ +M G++PDG+T S+LS C+ + L G+
Sbjct: 186 DLVA-WNSVINGF-AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 215 VHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRV 274
VH +I+ G N L+ +Y CG V +A +F E+ ++ V++ ++I GL
Sbjct: 244 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD--KNSVSWTSLIVGLAVN 301
Query: 275 DRNEDAFVMFRDMQKA-CFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNA 333
++A +F+ M+ P E TFV ++ +CS +K GF+
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACS--------HCGMVKEGFEY------- 346
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
F ++ E I R+E + M+ + + + A Y ++ + ++P+
Sbjct: 347 -------FRRMREEYKIEPRIEH-----FGCMVDLLARAGQVKKA---YEYIKSMPMQPN 391
Query: 394 EFTYGSLLGA 403
+ +LLGA
Sbjct: 392 VVIWRTLLGA 401
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 51/244 (20%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + ++ N ++ + + E+L L+T+++S ++PD +T+ + ++A A
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSLLSACAKI----G 236
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A T G ++H + I+ GL + H +N LL LYA+
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC-------------------------- 270
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI-GVRPD 193
G V +A LFD+M ++++V+ W ++I A NG A +LF+ M+ G+ P
Sbjct: 271 -----GRVEEAKTLFDEMVDKNSVS-WTSLIVGL-AVNGFGKEAIELFKYMESTEGLLPC 323
Query: 194 GYTFTSMLSLCSVELLDFGRHVHSVVIRSGF--LARTSVVNSLITMYFNCGCVVDAYQVF 251
TF +L CS H +++ GF R + + GC+VD
Sbjct: 324 EITFVGILYACS----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 252 GEVE 255
G+V+
Sbjct: 374 GQVK 377
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/541 (27%), Positives = 261/541 (48%), Gaps = 11/541 (2%)
Query: 203 LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
L + L+ + VH+ VI GF + +SL Y + A F + R+
Sbjct: 14 LSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRH 73
Query: 263 TYNAMIDGLVRVDR--NEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQA 317
++N ++ G + D +++ M++ C V + +C L + G
Sbjct: 74 SWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHG 133
Query: 318 QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
++K G D V + + MY+ G + AQ +F+ + R+ V W +++ + + + +
Sbjct: 134 LAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPE 193
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGASDSL---QVVEMVHSL-LSKIGLMKVEVLN-SLI 432
+ MR G+ D T L+ A ++ +V + VH + + + + + + L S+I
Sbjct: 194 VFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASII 253
Query: 433 AAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAY 492
Y + ++ A ++F ++++ W T+ISGF ++ + F +L + PN
Sbjct: 254 DMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC 313
Query: 493 XXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM 552
HGK VHGY++R+G + + + MYA+CG++ + VF+ M
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMM 373
Query: 553 VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDG 612
+R+ ISW+++I+A+ +G +EA+ CF M+ S + P+ TF +LSACSH G V +G
Sbjct: 374 PERNVISWSSMINAFGINGLFEEALDCFHKMK-SQNVVPNSVTFVSLLSACSHSGNVKEG 432
Query: 613 TRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACA 672
+ F+ M YG VP +H++C+VDLLGR+G + EA+ I ++ +L SAC
Sbjct: 433 WKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACR 492
Query: 673 AHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGC 732
H + L +A LL + SVYVLLSNI A AG WE +R M G K G
Sbjct: 493 IHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQ 552
Query: 733 S 733
S
Sbjct: 553 S 553
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 172/353 (48%), Gaps = 17/353 (4%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRD 184
DDY +++ +LG + A K+FD++P R++V +W ++ + D F LF
Sbjct: 143 DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSV-LW-GVLMKGYLKYSKDPEVFRLFCL 200
Query: 185 MQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVN-SLITMYFNCG 242
M+ G+ D T ++ C +V G+ VH V IR F+ ++ + S+I MY C
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR 260
Query: 243 CVVDAYQVFGEVEAGL-RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
+ +A ++F E + R+ V + +I G + +R +AF +FR M + P + T +
Sbjct: 261 LLDNARKLF---ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAA 317
Query: 302 VMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERD 358
++ SCS SLR G I+ G + + + MY+ G + A+ +F+ M ER+
Sbjct: 318 ILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERN 377
Query: 359 LVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA-SDSLQVVE---MVH 414
++SW+ MI+ F L E A+ + KM+ + P+ T+ SLL A S S V E
Sbjct: 378 VISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFE 437
Query: 415 SLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS-WNTIISG 465
S+ G++ + E ++ R G I A N+P K + S W ++S
Sbjct: 438 SMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 31/270 (11%)
Query: 113 SVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADN 172
S+ R+F + DY +++ + + +A KLF+ +R NV +W +I+ G
Sbjct: 236 SIRRSFID---QSDYLQASIIDMYVKCRLLDNARKLFETSVDR-NVVMWTTLIS--GFAK 289
Query: 173 GHDDV-AFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSV 230
V AFDLFR M + + P+ T ++L CS + L G+ VH +IR+G
Sbjct: 290 CERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVN 349
Query: 231 VNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
S I MY CG + A VF + R+ +++++MI+ E+A F M+
Sbjct: 350 FTSFIDMYARCGNIQMARTVFDMMPE--RNVISWSSMINAFGINGLFEEALDCFHKMKSQ 407
Query: 291 CFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTM-----YSCF---- 341
P TFVS++S+CS + ++K G+ + ++ + Y+C
Sbjct: 408 NVVPNSVTFVSLLSACS--------HSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLL 459
Query: 342 ---GKVNEAQNIFERMEERDLVS-WNIMIS 367
G++ EA++ + M + + S W ++S
Sbjct: 460 GRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 227/474 (47%), Gaps = 38/474 (8%)
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS-SLRVGCQAQAQSIKT 322
YNA+ G V + ++ M + SP T+ S++ + S + R G QA K
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKF 898
Query: 323 GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTY 382
GF + + + YS G++ EA+ +F+ M ERD ++W M+S +
Sbjct: 899 GFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY------------- 945
Query: 383 LKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRIN 442
RRV ++ D +SL +++ N LI Y G +
Sbjct: 946 ---RRV-LDMDS------------------ANSLANQMSEKNEATSNCLINGYMGLGNLE 983
Query: 443 WALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXX 502
A +F+ +P K +ISW T+I G+ N + + F ++ + P+
Sbjct: 984 QAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACA 1043
Query: 503 XXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNA 562
GK+VH Y L++GF ++ +G+ALV MY+KCGSL+ +L VF + K++ WN+
Sbjct: 1044 HLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNS 1103
Query: 563 LISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNI 622
+I A HG +EA+ F M++ ++P+ TF V +AC+H GLVD+G RI+ M++
Sbjct: 1104 IIEGLAAHGFAQEALKMFAKMEME-SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDD 1162
Query: 623 YGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRM 682
Y V +V+H+ +V L ++G + EA LI F N+ I +L C H NL + +
Sbjct: 1163 YSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEI 1222
Query: 683 VARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQ-PGCSWI 735
L+ + N Y LL ++ A +W + A +R MRE G K PG S I
Sbjct: 1223 AFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 1276
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 177/393 (45%), Gaps = 52/393 (13%)
Query: 13 TTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPA 72
T + + N L + SL+L+ ++ ++ P YT S+ + AS+
Sbjct: 829 TQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRD-SVSPSSYTYSSLVKASS----- 882
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
A+ FG L AH + G H + +L+ Y+ + + F E+ DD +WTTM
Sbjct: 883 -FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTM 941
Query: 133 LSASTR-------------------------------LGHVGDALKLFDQMPNRSNVAVW 161
+SA R LG++ A LF+QMP + ++ W
Sbjct: 942 VSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVK-DIISW 1000
Query: 162 NAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVI 220
+I + + N A +F M + G+ PD T ++++S C+ + +L+ G+ VH +
Sbjct: 1001 TTMI-KGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 1059
Query: 221 RSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDA 280
++GF+ + ++L+ MY CG + A VF + ++ +N++I+GL ++A
Sbjct: 1060 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK--KNLFCWNSIIEGLAAHGFAQEA 1117
Query: 281 FVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSI-KTGFDAYTAVNN-----AT 334
MF M+ P TFVSV ++C+ G + + I ++ D Y+ V+N
Sbjct: 1118 LKMFAKMEMESVKPNAVTFVSVFTACT--HAGLVDEGRRIYRSMIDDYSIVSNVEHYGGM 1175
Query: 335 MTMYSCFGKVNEAQNIFERME-ERDLVSWNIMI 366
+ ++S G + EA + ME E + V W ++
Sbjct: 1176 VHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
++N I A R++ A+ + + ++ +N + GF+T P++ LE + +L
Sbjct: 807 LMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDS 866
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSL 546
+ P++Y G+ + +I + GF + + L+ Y+ G + +
Sbjct: 867 VSPSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREAR 924
Query: 547 GVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
VF+ M +RD I+W ++SAY + A M E + AT +++ +
Sbjct: 925 KVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMS-----EKNEATSNCLINGYMGL 979
Query: 607 GLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA----ERLIKGGYFGANSN 662
G ++ +F+ M V + ++ ++ ++ EA ++++ G
Sbjct: 980 GNLEQAESLFNQMP-----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVT 1034
Query: 663 ICWSLFSACAAHGNLRLGRMVARLLLE 689
+ ++ SACA G L +G+ V L+
Sbjct: 1035 MS-TVISACAHLGVLEIGKEVHMYTLQ 1060
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 230/466 (49%), Gaps = 17/466 (3%)
Query: 278 EDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNAT 334
E ++ R M+ P E TF VM CS+ +RVG ++ GFD V +
Sbjct: 92 ETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSF 151
Query: 335 MTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETA--ILTYLKMRRVGIEP 392
+ Y + A+ +F M ER+ VSW ++ + + E A + + R +G
Sbjct: 152 VDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG--- 208
Query: 393 DEFTYGSLL-GASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNL 451
++ +L+ G S +V L ++ + S+I Y + G + A +F
Sbjct: 209 ---SWNALVDGLVKSGDLVN-AKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEA 264
Query: 452 PYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGK 511
+ +W+ +I G+ NG P + + FS + +KP+ + +
Sbjct: 265 RGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCE 324
Query: 512 QVHGYILR--HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQ 569
+V Y+ + + FSS + AL+ M AKCG +D + +F M +RD +S+ +++ A
Sbjct: 325 KVDSYLHQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAI 383
Query: 570 HGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSV 629
HG G EA+ FE M + GI PD FT++L C LV++G R F++M Y + S
Sbjct: 384 HGCGSEAIRLFEKM-VDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASP 442
Query: 630 DHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLE 689
DH+SCIV+LL R+G L+EA LIK F A+++ SL C+ HGN + +VAR L E
Sbjct: 443 DHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFE 502
Query: 690 KDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ + YVLLSNI AA +W + A+LRD M E G TK G SWI
Sbjct: 503 LEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 192/469 (40%), Gaps = 75/469 (15%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
NHL+ + E++ + ++ + RPD YT + +N G+ +H
Sbjct: 78 NHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNN----GQVRVGSSVH 133
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+R G V S + Y K +DL S + F E+ + SWT ++ A + G +
Sbjct: 134 GLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELE 193
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDV-AFDLFRDMQKIGVRPDGYTFTSMLS 202
+A +FD MP R N+ WNA++ G D V A LF +M K D ++TSM
Sbjct: 194 EAKSMFDLMPER-NLGSWNALVD--GLVKSGDLVNAKKLFDEMPK----RDIISYTSM-- 244
Query: 203 LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
I Y G +V A +F E D
Sbjct: 245 --------------------------------IDGYAKGGDMVSARDLFEEARG--VDVR 270
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKT 322
++A+I G + + +AF +F +M P E V +MS+CS + GC + + +
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQM--GCFELCEKVDS 328
Query: 323 -------GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
F ++ V A + M + G ++ A +FE M +RDLVS+ M+
Sbjct: 329 YLHQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCG 387
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM--KVEVLNS--- 430
AI + KM GI PDE + +L ++VE L LM K +L S
Sbjct: 388 SEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVE---EGLRYFELMRKKYSILASPDH 444
Query: 431 ---LIAAYCRNGRINWALQIFSNLPYKSLIS-WNTIISGFLTNGCPLQG 475
++ R G++ A ++ ++P+++ S W G L GC L G
Sbjct: 445 YSCIVNLLSRTGKLKEAYELIKSMPFEAHASAW-----GSLLGGCSLHG 488
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 164/380 (43%), Gaps = 16/380 (4%)
Query: 350 IFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGI-EPDEFTYGSLLGA---SD 405
+FER+ WN +I + + L + ++M R G+ PDE+T+ ++ +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 406 SLQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIIS 464
++V VH L+ +IG K V V S + Y + + A ++F +P ++ +SW ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 465 GFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSS 524
++ +G LE+ ++ + + N + K++ + + S
Sbjct: 185 AYVKSG----ELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS 240
Query: 525 EISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQ 584
S ++ YAK G + + +F D +W+ALI YAQ+GQ EA F M
Sbjct: 241 YTS----MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM- 295
Query: 585 ISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGY 644
+ ++PD ++SACS +G + ++ + S ++D+ + G+
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGH 355
Query: 645 LEEAERLIKGGYFGANSNICWSLFSACAAHG-NLRLGRMVARLLLEKDHNNPSVYVLLSN 703
++ A +L + + C S+ A HG R+ +++ E + + ++
Sbjct: 356 MDRAAKLFEEMPQRDLVSYC-SMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILK 414
Query: 704 ICAAAGQWEEAANLRDMMRE 723
+C + EE ++MR+
Sbjct: 415 VCGQSRLVEEGLRYFELMRK 434
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 177/599 (29%), Positives = 295/599 (49%), Gaps = 24/599 (4%)
Query: 138 RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
+ G + L+ FD M +R +V+ WN I+ D G ++ F ++ G P+ T
Sbjct: 73 KCGDLCSGLREFDCMNSRDSVS-WNVIVFGL-LDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 198 TSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
++ C D G +H VIRSGF +SV NS++ MY + + A ++F E+
Sbjct: 131 VLVIHACRSLWFD-GEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSE- 187
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSLR---VGC 313
RD ++++ +I V+ +F++M +A P T SV+ +C+ + VG
Sbjct: 188 -RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGR 246
Query: 314 QAQAQSIKTGFD-AYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
SI+ GFD A V N+ + MYS V+ A +F+ R++VSWN +++ F
Sbjct: 247 SVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHN 306
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ---VVEMVHSLLSKIGLMKVEV-L 428
+ A+ + M + +E DE T SLL + + +H ++ + G EV L
Sbjct: 307 QRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVAL 366
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
+SLI AY ++ A + ++ YK ++S +T+ISG G + + F + +TP
Sbjct: 367 SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP-- 424
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFS-SEISLGNALVTMYAKCGSLDGSLG 547
NA K HG +R + ++IS+G ++V YAKCG+++ +
Sbjct: 425 -NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARR 483
Query: 548 VFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG 607
F+ + +++ ISW +ISAYA +G +A+ F+ M+ G P+ T+ LSAC+H G
Sbjct: 484 TFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK-QKGYTPNAVTYLAALSACNHGG 542
Query: 608 LVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKG--GYFGANSNICW 665
LV G IF MV PS+ H+SCIVD+L R+G ++ A LIK A ++
Sbjct: 543 LVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWG 601
Query: 666 SLFSACAAH-GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
++ S C L + V +LE + S Y+L S+ AA WE+ A +R +++E
Sbjct: 602 AILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKE 660
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 202/472 (42%), Gaps = 71/472 (15%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+S ++ + ++ + +S + LKLF ++ PD T+++ + A
Sbjct: 185 MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT----VME 240
Query: 75 ATTFGNQLHAHAIRTGLK-AHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
G +H +IR G A V NSL+ +Y+K D+ S R F E + SW ++L
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
+ N D A ++F M + V D
Sbjct: 301 AGFVH---------------------------------NQRYDEALEMFHLMVQEAVEVD 327
Query: 194 GYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
T S+L +C E + +H V+IR G+ + ++SLI Y +C V DA V
Sbjct: 328 EVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLD 387
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SL 309
+ +D V+ + MI GL R+++A +F M+ +P T +S++++CS L
Sbjct: 388 SMT--YKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADL 442
Query: 310 RVGCQAQAQSIKTGFDAY-TAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISM 368
R A +I+ +V + + Y+ G + A+ F+++ E++++SW ++IS
Sbjct: 443 RTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISA 502
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM----- 423
+ L + A+ + +M++ G P+ TY + L A + H L K GLM
Sbjct: 503 YAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACN--------HGGLVKKGLMIFKSM 554
Query: 424 -------KVEVLNSLIAAYCRNGRINWALQIFSNLPYK---SLISWNTIISG 465
++ + ++ R G I+ A+++ NLP +W I+SG
Sbjct: 555 VEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 131/276 (47%), Gaps = 6/276 (2%)
Query: 332 NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIE 391
N+ Y G + F+ M RD VSWN+++ E + + K+R G E
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 392 PDEFTYGSLLGASDSLQVV-EMVHSLLSKIGLMKV-EVLNSLIAAYCRNGRINWALQIFS 449
P+ T ++ A SL E +H + + G + V NS++ Y + ++ A ++F
Sbjct: 125 PNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFD 183
Query: 450 NLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN-TPLKPNAYXXXXXXXXXXXXXXXX 508
+ + +ISW+ +I ++ + P+ GL+ F +++ +P+
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDID 243
Query: 509 HGKQVHGYILRHGFS-SEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAY 567
G+ VHG+ +R GF +++ + N+L+ MY+K +D + VF+ R+ +SWN++++ +
Sbjct: 244 VGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGF 303
Query: 568 AQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
+ + EA+ F M + +E D T +L C
Sbjct: 304 VHNQRYDEALEMFHLM-VQEAVEVDEVTVVSLLRVC 338
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 529 GNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPG 588
GN++ Y KCG L L F+ M RD++SWN ++ +G +E + F +++ G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW-G 122
Query: 589 IEPDHATFTIVLSACSHVGLVDDGTRI 615
EP+ +T +V+ AC + DG +I
Sbjct: 123 FEPNTSTLVLVIHACRSLWF--DGEKI 147
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 164/579 (28%), Positives = 279/579 (48%), Gaps = 28/579 (4%)
Query: 176 DVAFDLFR-DMQKIGVRPDGYTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVN 232
D A L++ + +G S++ C+ + F G +H + +++G T V N
Sbjct: 27 DEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSN 86
Query: 233 SLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACF 292
SLI+MY +VF E+ RD V+Y ++I+ + +A + ++M F
Sbjct: 87 SLISMYAKFSRKYAVRKVFDEMLH--RDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGF 144
Query: 293 SPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNN----------ATMTMYSCFG 342
P S+++ C+ R+G ++ + F A V+ A + MY F
Sbjct: 145 IPKSELVASLLALCT--RMGSSSKVARM---FHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 343 KVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
A ++F++ME ++ VSW MIS E + + M+R + P+ T S+L
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLP 259
Query: 403 ASDSLQ----VVEMVHSLLSKIGLMKVEVLNS-LIAAYCRNGRINWALQIFSNLPYKSLI 457
A L +V+ +H + G E L + + YCR G ++ + +F + ++
Sbjct: 260 ACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVV 319
Query: 458 SWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYI 517
W+++ISG+ G + + + + ++ N+ VH I
Sbjct: 320 MWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQI 379
Query: 518 LRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAV 577
L+ GF S I LGNAL+ MYAKCGSL + VF + ++D +SW+++I+AY HG G EA+
Sbjct: 380 LKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEAL 439
Query: 578 CCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVD 637
F+ M I G E D F +LSAC+H GLV++ IF Y +++H++C ++
Sbjct: 440 EIFKGM-IKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGKYHMPVTLEHYACYIN 497
Query: 638 LLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRL-GRMVARLLLEKDHNNPS 696
LLGR G +++A + ++ I SL SAC HG L + G+++A L++ + +NP+
Sbjct: 498 LLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPA 557
Query: 697 VYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
YVLLS I +G + A +R +M+ K G S I
Sbjct: 558 NYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKI 596
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 149/612 (24%), Positives = 270/612 (44%), Gaps = 72/612 (11%)
Query: 12 TTTISSEQILKLNHLLATLTRSNQHTESLKLFT-QIHSSHTLRPDHYT--LSTAITASAN 68
+ +SS L+L + L L + E+L+L+ +IHS L + +T L + I A A
Sbjct: 2 SRALSSRLNLELGNKLKGLVSDQFYDEALRLYKLKIHS---LGTNGFTAILPSVIKACAF 58
Query: 69 TRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYS 128
+ G QLH ++ G + V+NSL+S+YAK +V + F E+ + D S
Sbjct: 59 QQEP---FLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVS 115
Query: 129 WTTMLSASTRLGHVGDALKLFDQM------PNRSNVAVWNAIITRCGADNGHDDVAFDLF 182
+ +++++ + G + +A+KL +M P VA A+ TR G+ +
Sbjct: 116 YCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSS---------- 165
Query: 183 RDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNS-LITMYFNC 241
R H++V+ + + ++++ L+ MY
Sbjct: 166 ---------------------------KVARMFHALVLVDERMQESVLLSTALVDMYLKF 198
Query: 242 GCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
A+ VF ++E +++ V++ AMI G V E +FR MQ+ P T +S
Sbjct: 199 DDHAAAFHVFDQME--VKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 302 VMSSCSSLRVGC----QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER 357
V+ +C L G + S + G A + A MTMY G V+ ++ +FE + R
Sbjct: 257 VLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR 316
Query: 358 DLVSWNIMISMFFQENLNETAILTYL-KMRRVGIEPDEFTYGSLLGA---SDSLQVVEMV 413
D+V W+ MIS + E + + ++ L +MR+ GIE + T +++ A S L V
Sbjct: 317 DVVMWSSMISG-YAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 414 HSLLSKIGLMKVEVL-NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCP 472
HS + K G M +L N+LI Y + G ++ A ++F L K L+SW+++I+ + +G
Sbjct: 376 HSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHG 435
Query: 473 LQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNAL 532
+ LE F ++ + + + + ++ +
Sbjct: 436 SEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACY 495
Query: 533 VTMYAKCGSLDGSLGV-FNAMVKRDTISWNALISAYAQHGQGKEA--VCCFEAMQISPGI 589
+ + + G +D + V N +K W++L+SA HG+ A + E M+
Sbjct: 496 INLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMK----S 551
Query: 590 EPDHATFTIVLS 601
EPD+ ++LS
Sbjct: 552 EPDNPANYVLLS 563
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 221/421 (52%), Gaps = 7/421 (1%)
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQEN 373
+ A ++TGF ++ + G + A+ +F+ M + + WN + + +
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 374 LNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE---MVHSLLSKIGLMKVEVL-N 429
L ++L Y KMR +G+ PDEFTY ++ A L +H+ + K G + ++
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 430 SLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKP 489
L+ Y + G ++ A +F ++ K L++WN ++ + G LE F+ + ++
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 490 NAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVF 549
+++ G++++ + I + NA + M+ KCG+ + + +F
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 550 NAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLV 609
M +R+ +SW+ +I YA +G +EA+ F MQ + G+ P++ TF VLSACSH GLV
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ-NEGLRPNYVTFLGVLSACSHAGLV 327
Query: 610 DDGTRIFDMMV--NIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSL 667
++G R F +MV N P +H++C+VDLLGRSG LEEA IK ++ I +L
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 668 FSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTT 727
ACA H ++ LG+ VA +L+E + S +VLLSNI AAAG+W+ +R MR+ GT
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 728 K 728
K
Sbjct: 448 K 448
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 179/400 (44%), Gaps = 16/400 (4%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
+ +H++V+R+GF + S++ L+ G + A QVF E+ +N + G V
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKP--RIFLWNTLFKGYV 85
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTA 329
R ++ ++++ M+ P E T+ V+ + S L G A +K GF
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
V + MY FG+++ A+ +FE M+ +DLV+WN +++ Q + A+ + KM
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 390 IEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWAL 445
++ D FT S+L A L +E+ + + +++ V N+ + + + G A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 446 QIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXX 505
+F + ++++SW+T+I G+ NG + L F+ + N L+PN
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 506 XXXHGKQVHGYILR---HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWN 561
GK+ +++ +V + + G L+ + M V+ DT W
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 562 ALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLS 601
AL+ A A H ++ + + + PD ++ ++LS
Sbjct: 386 ALLGACAVH---RDMILGQKVADVLVETAPDIGSYHVLLS 422
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 163/399 (40%), Gaps = 70/399 (17%)
Query: 6 FSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITA 65
++RQ+ + +I N L R+ ESL L+ ++ +RPD +T + A
Sbjct: 61 YARQV-FDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDL-GVRPDEFTYPFVVKA 118
Query: 66 SANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPD 125
+ + G LHAH ++ G VA L+ +Y K +L+S E F ++ D
Sbjct: 119 ISQLGDFSC----GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKD 174
Query: 126 DYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDM 185
+W L+ + G+ AL+ F++M C D V FD F
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKM---------------CA-----DAVQFDSF--- 211
Query: 186 QKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCV 244
T SMLS C + L+ G ++ + V N+ + M+ CG
Sbjct: 212 ----------TVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 245 VDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
A +F E++ R+ V+++ MI G + +A +F MQ P TF+ V+S
Sbjct: 262 EAARVLFEEMKQ--RNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 305 SCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
+CS + + N +S + N+ +N+ R E +
Sbjct: 320 ACS-------------------HAGLVNEGKRYFSLMVQSND-KNLEPRKEH-----YAC 354
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
M+ + + L E A Y ++++ +EPD +G+LLGA
Sbjct: 355 MVDLLGRSGLLEEA---YEFIKKMPVEPDTGIWGALLGA 390
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/572 (27%), Positives = 257/572 (44%), Gaps = 51/572 (8%)
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVR 273
+H+ ++ + + LI+ Y A VF E+ +R+ +YNA++
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEIT--VRNAFSYNALLIAYTS 100
Query: 274 VDRNEDAFVMFRD-MQKACFSPMEATFVSV--------MSSCSSLRVGC---QAQAQSIK 321
+ DAF +F + +C+S A S+ +S C +G Q I+
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 322 TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILT 381
GFD+ V N +T Y+ + A+ +F+ M ERD+VSWN MIS + Q E
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 382 YLKMRRVG-IEPDEFTYGSLLGA----SDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYC 436
Y M +P+ T S+ A SD + +E+ ++ M + + N++I Y
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYA 280
Query: 437 RNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL--------- 487
+ G +++A +F + K +++ IISG++ +G + + FS + + L
Sbjct: 281 KCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISG 340
Query: 488 ----------------------KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSE 525
+PN GK++H + +R+G +
Sbjct: 341 LMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN 400
Query: 526 ISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQI 585
I + +++ YAK G L G+ VF+ R I+W A+I+AYA HG A F+ MQ
Sbjct: 401 IYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQ- 459
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYL 645
G +PD T T VLSA +H G D IFD M+ Y P V+H++C+V +L R+G L
Sbjct: 460 CLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKL 519
Query: 646 EEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNIC 705
+A I + + +L + + G+L + R L E + N Y +++N+
Sbjct: 520 SDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLY 579
Query: 706 AAAGQWEEAANLRDMMREFGTTKQPGCSWIGT 737
AG+WEEA +R+ M+ G K PG SWI T
Sbjct: 580 TQAGRWEEAEMVRNKMKRIGLKKIPGTSWIET 611
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 211/498 (42%), Gaps = 83/498 (16%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLF-----TQIHSSHTLRPDHYTLSTAITASANT 69
I+ N LL T + ++ LF + +SS RPD ++S + A +
Sbjct: 83 ITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGC 142
Query: 70 RPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSW 129
+ Q+H IR G + V N +++ Y K +++ S + F E+ D SW
Sbjct: 143 DDFWLGS-LARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSW 201
Query: 130 TTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG 189
+M+S ++ G D K++ M S+
Sbjct: 202 NSMISGYSQSGSFEDCKKMYKAMLACSD-------------------------------- 229
Query: 190 VRPDGYTFTSMLSLC--SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA 247
+P+G T S+ C S +L+ FG VH +I + S+ N++I Y CG + A
Sbjct: 230 FKPNGVTVISVFQACGQSSDLI-FGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYA 288
Query: 248 YQVFGEVEAGLRDHVTY-------------------------------NAMIDGLVRVDR 276
+F E+ +D VTY NAMI GL++ +
Sbjct: 289 RALFDEMSE--KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNH 346
Query: 277 NEDAFVMFRDMQKACFSPMEATFVSVMSS---CSSLRVGCQAQAQSIKTGFDAYTAVNNA 333
+E+ FR+M + P T S++ S S+L+ G + A +I+ G D V +
Sbjct: 347 HEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTS 406
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
+ Y+ G + AQ +F+ ++R L++W +I+ + +++A + +M+ +G +PD
Sbjct: 407 IIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPD 466
Query: 394 EFTYGSLLGA----SDSLQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIF 448
+ T ++L A DS + S+L+K + VE +++ R G+++ A++
Sbjct: 467 DVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFI 526
Query: 449 SNLPYKSLIS-WNTIISG 465
S +P + W +++G
Sbjct: 527 SKMPIDPIAKVWGALLNG 544
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 143/587 (24%), Positives = 249/587 (42%), Gaps = 113/587 (19%)
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFR 183
PD++ + ++S TR AL +FD++ R N +NA++ + + D AF LF
Sbjct: 55 PDNFLASKLISFYTRQDRFRQALHVFDEITVR-NAFSYNALLIAYTSREMYFD-AFSLF- 111
Query: 184 DMQKIG--------VRPDGYTFTSMLSLCS----VELLDFGRHVHSVVIRSGFLARTSVV 231
+ IG RPD + + +L S L R VH VIR GF + V
Sbjct: 112 -LSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVG 170
Query: 232 NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC 291
N +IT Y C + A +VF E+ RD V++N+MI G + ED M++ M AC
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSE--RDVVSWNSMISGYSQSGSFEDCKKMYKAML-AC 227
Query: 292 --FSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNE 346
F P T +SV +C S L G + + I+ ++ NA + Y+ G ++
Sbjct: 228 SDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDY 287
Query: 347 AQNIFERMEERD-------------------------------LVSWNIMISMFFQENLN 375
A+ +F+ M E+D L +WN MIS Q N +
Sbjct: 288 ARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHH 347
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGL-MKVEVLNSL 431
E I ++ +M R G P+ T SLL + S +L+ + +H+ + G + V S+
Sbjct: 348 EEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSI 407
Query: 432 IAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
I Y + G + A ++F N +SLI+W II+ + +G F + KP+
Sbjct: 408 IDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPD- 466
Query: 492 YXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNA 551
+++L A+++ +A G D + +F++
Sbjct: 467 ---------------------------------DVTL-TAVLSAFAHSGDSDMAQHIFDS 492
Query: 552 MVKRDTIS-----WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
M+ + I + ++S ++ G+ +A+ M I+P + +L+ S +
Sbjct: 493 MLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP----IDPIAKVWGALLNGASVL 548
Query: 607 GLVDDG----TRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
G ++ R+F+M G +++ + +L ++G EEAE
Sbjct: 549 GDLEIARFACDRLFEMEPENTG------NYTIMANLYTQAGRWEEAE 589
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 219 bits (559), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 218/430 (50%), Gaps = 9/430 (2%)
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQEN 373
Q A I TG+ ++ +T+ + +F + D +N +I +
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLR 86
Query: 374 LNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM-----VHSLLSKIGLMKVEVL 428
L + Y +M + P +T+ S++ + L + + H+++S GL V
Sbjct: 87 LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL-DTYVQ 145
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
+L+ Y + G + A Q+F +P KS+++WN+++SGF NG + ++ F + + +
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
P++ G VH YI+ G + LG AL+ +Y++CG + + V
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 549 FNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGL 608
F+ M + + +W A+ISAY HG G++AV F M+ G P++ TF VLSAC+H GL
Sbjct: 266 FDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGL 325
Query: 609 VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK--GGYFGANSNICWS 666
V++G ++ M Y +P V+H C+VD+LGR+G+L+EA + I A + W+
Sbjct: 326 VEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWT 385
Query: 667 -LFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFG 725
+ AC H N LG +A+ L+ + +NP +V+LSNI A +G+ +E +++RD M
Sbjct: 386 AMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNN 445
Query: 726 TTKQPGCSWI 735
KQ G S I
Sbjct: 446 LRKQVGYSVI 455
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 190/427 (44%), Gaps = 29/427 (6%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLV 272
+ VH+ +I +G+ S++ LIT+ C AY + L D +N++I
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITL--ACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTS 83
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTA 329
++ +R M + SP TF SV+ SC S+LR+G ++ +GF T
Sbjct: 84 KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY 143
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
V A +T YS G + A+ +F+RM E+ +V+WN ++S F Q L + AI + +MR G
Sbjct: 144 VQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
Query: 390 IEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWAL 445
EPD T+ SLL A V + VH + GL + V++ +LI Y R G + A
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263
Query: 446 QIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNT--PLKPNAYXXXXXXXXXXX 503
++F + ++ +W +IS + T+G Q +E F+ + + P+ PN
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI-PNNVTFVAVLSACAH 322
Query: 504 XXXXXHGKQVH-----GYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTI 558
G+ V+ Y L G + +V M + G LD + + +
Sbjct: 323 AGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDMLGRAGFLDEAYKFIHQLDATGKA 378
Query: 559 S----WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV-GLVDDGT 613
+ W A++ A H V E + +EPD+ ++LS + G D+ +
Sbjct: 379 TAPALWTAMLGACKMHRNYDLGV---EIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVS 435
Query: 614 RIFDMMV 620
I D M+
Sbjct: 436 HIRDGMM 442
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 163/346 (47%), Gaps = 40/346 (11%)
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRL 139
Q+HAH I TG + L++L A +A F + PDD+ + +++ ++++L
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTS 199
++P C VA+ +R M V P YTFTS
Sbjct: 86 -----------RLP------------LHC--------VAY--YRRMLSSNVSPSNYTFTS 112
Query: 200 MLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
++ C+ + L G+ VH + SGF T V +L+T Y CG + A QVF +
Sbjct: 113 VIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPE-- 170
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQA 315
+ V +N+++ G + ++A +F M+++ F P ATFVS++S+C+ ++ +G
Sbjct: 171 KSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWV 230
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
I G D + A + +YS G V +A+ +F++M+E ++ +W MIS +
Sbjct: 231 HQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYG 290
Query: 376 ETAILTYLKMR-RVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKI 420
+ A+ + KM G P+ T+ ++L A +VE S+ ++
Sbjct: 291 QQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM 336
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 41/261 (15%)
Query: 49 SHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKA 108
S + P +YT ++ I + A+ +A G +H HA+ +G ++V +L++ Y+K
Sbjct: 100 SSNVSPSNYTFTSVIKSCADL----SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC 155
Query: 109 EDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRC 168
D+ A ++FD+MP +S VA WN++++
Sbjct: 156 GDMEG-------------------------------ARQVFDRMPEKSIVA-WNSLVSGF 183
Query: 169 GADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLAR 227
NG D A +F M++ G PD TF S+LS C+ + G VH +I G
Sbjct: 184 -EQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 228 TSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
+ +LI +Y CG V A +VF +++ + + AMI + A +F M
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKE--TNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 288 QKACFS-PMEATFVSVMSSCS 307
+ C P TFV+V+S+C+
Sbjct: 301 EDDCGPIPNNVTFVAVLSACA 321
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 120/269 (44%), Gaps = 42/269 (15%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + I+ N L++ ++ E++++F Q+ S PD T + ++A A T
Sbjct: 168 MPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRES-GFEPDSATFVSLLSACAQT----G 222
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A + G+ +H + I GL + + +L++LY++ D+ F +++ + +WT M+S
Sbjct: 223 AVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMIS 282
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
A G+ A++LF++M DD G P+
Sbjct: 283 AYGTHGYGQQAVELFNKM---------------------EDDC-----------GPIPNN 310
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRS-GFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
TF ++LS C+ L++ GR V+ + +S + ++ M G + +AY+
Sbjct: 311 VTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH 370
Query: 253 EVEAGLRDHVT--YNAMIDGLVRVDRNED 279
+++A + + AM+ G ++ RN D
Sbjct: 371 QLDATGKATAPALWTAML-GACKMHRNYD 398
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 209/424 (49%), Gaps = 36/424 (8%)
Query: 347 AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS 406
A IF +++ +L +N++I F A Y +M + I PD T+ L+ AS
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 407 LQVV---EMVHS--------------------------------LLSKIGLMKVEVLNSL 431
++ V E HS + ++G V S+
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 432 IAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
+A YC+ G + A ++F +P+++L +W+ +I+G+ N C + ++ F + + N
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 492 YXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNA 551
G++ + Y+++ + + LG ALV M+ +CG ++ ++ VF
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 552 MVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDD 611
+ + D++SW+++I A HG +A+ F M IS G P TFT VLSACSH GLV+
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM-ISLGFIPRDVTFTAVLSACSHGGLVEK 368
Query: 612 GTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSAC 671
G I++ M +G P ++H+ CIVD+LGR+G L EAE I + N+ I +L AC
Sbjct: 369 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGAC 428
Query: 672 AAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPG 731
+ N + V +L++ + YVLLSNI A AGQW++ +LRDMM+E K PG
Sbjct: 429 KIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488
Query: 732 CSWI 735
S I
Sbjct: 489 WSLI 492
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 165/355 (46%), Gaps = 30/355 (8%)
Query: 13 TTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPA 72
+ I + + N L+ + + +++ +TQ+ S + PD+ T I AS+
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSR-IWPDNITFPFLIKASSEME-- 131
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
G Q H+ +R G + +V NSL+ +YA +A+ R F ++ + D SWT+M
Sbjct: 132 --CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
++ + G V +A ++FD+MP+R N+ W+ +I +N + A DLF M++ GV
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHR-NLFTWSIMINGYAKNNCFEK-AIDLFEFMKREGVVA 247
Query: 193 DGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
+ S++S C+ + L+FG + V++S + +L+ M++ CG + A VF
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV 311
+ D ++++++I GL A F M F P + TF +V+S+CS
Sbjct: 308 EGLPE--TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACS---- 361
Query: 312 GCQAQAQSIKTGFDAYTAVNN-----ATMTMYSCF-------GKVNEAQNIFERM 354
++ G + Y + + Y C GK+ EA+N +M
Sbjct: 362 ----HGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 138/305 (45%), Gaps = 39/305 (12%)
Query: 142 VGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML 201
+G A +F Q+ N N+ V+N +I RC + AF + M K + PD TF ++
Sbjct: 67 LGYAYGIFSQIQN-PNLFVFNLLI-RCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI 124
Query: 202 SLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRD 260
S +E + G HS ++R GF V NSL+ MY NCG + A ++FG++ G RD
Sbjct: 125 KASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM--GFRD 182
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDM----------------QKACFSPM--------- 295
V++ +M+ G + E+A MF +M + CF
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR 242
Query: 296 ------EATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNE 346
E VSV+SSC+ +L G +A +K+ + A + M+ G + +
Sbjct: 243 EGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEK 302
Query: 347 AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS 406
A ++FE + E D +SW+ +I A+ + +M +G P + T+ ++L A
Sbjct: 303 AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSH 362
Query: 407 LQVVE 411
+VE
Sbjct: 363 GGLVE 367
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 182/460 (39%), Gaps = 67/460 (14%)
Query: 215 VHSVVIRSGFLARTSVVNSLITMYFNCGCVVD------------AYQVFGEVEAGLRDHV 262
+H ++R+ ++ V + L+ + CV D AY +F +++ +
Sbjct: 31 IHGFLLRTHLISDVFVASRLLAL-----CVDDSTFNKPTNLLGYAYGIFSQIQNP--NLF 83
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQS 319
+N +I AF + M K+ P TF ++ + S + VG Q +Q
Sbjct: 84 VFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQI 143
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSW----------------- 362
++ GF V N+ + MY+ G + A IF +M RD+VSW
Sbjct: 144 VRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAR 203
Query: 363 --------------NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ 408
+IMI+ + + N E AI + M+R G+ +E S++ + L
Sbjct: 204 EMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLG 263
Query: 409 VVEMVHSLLSKI--GLMKVEVL--NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIIS 464
+E + M V ++ +L+ + R G I A+ +F LP +SW++II
Sbjct: 264 ALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIK 323
Query: 465 GFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFS 523
G +G + + FS +++ P G +++ + + HG
Sbjct: 324 GLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIE 383
Query: 524 SEISLGNALVTMYAKCGSL-DGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEA 582
+ +V M + G L + + VK + AL+ A + + E
Sbjct: 384 PRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIY-KNTEVAERVGN 442
Query: 583 MQISPGIEPDHATFTIVLS---ACSHVGLVDDGTRIFDMM 619
M I ++P+H+ + ++LS AC+ G D + DMM
Sbjct: 443 MLIK--VKPEHSGYYVLLSNIYACA--GQWDKIESLRDMM 478
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 166/659 (25%), Positives = 300/659 (45%), Gaps = 68/659 (10%)
Query: 99 NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNV 158
N L+ ++ +A F ++E + +W TM+S + + A KLFD MP R +V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR-DV 102
Query: 159 AVWNAIIT---RCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHV 215
WN +I+ CG ++ A LF +M D +++ +M+S
Sbjct: 103 VTWNTMISGYVSCGGIRFLEE-ARKLFDEMPS----RDSFSWNTMIS------------- 144
Query: 216 HSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVD 275
G+ + +L+ ++ E R+ V+++AMI G +
Sbjct: 145 -------GYAKNRRIGEALLL-----------FEKMPE-----RNAVSWSAMITGFCQNG 181
Query: 276 RNEDAFVMFRDMQKACFSPMEATFVSVMSSCS-SLRVGCQAQAQSIKTGFDAYTAVNNAT 334
+ A V+FR M SP+ A ++ + S Q S+ +G + N
Sbjct: 182 EVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTL 241
Query: 335 MTMYSCFGKVNEAQNIFERMEE---------------RDLVSWNIMISMFFQENLNETAI 379
+ Y G+V A+ +F+++ + +++VSWN MI + + +A
Sbjct: 242 IVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSAR 301
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNG 439
L + +M+ + D ++ +++ + +E +L S++ N +++ Y G
Sbjct: 302 LLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVG 357
Query: 440 RINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
+ A F P K +SWN+II+ + N + ++ F + KP+ +
Sbjct: 358 NVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS 417
Query: 500 XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTI 558
G Q+H +++ ++ + NAL+TMY++CG + S +F+ M +KR+ I
Sbjct: 418 ASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVI 476
Query: 559 SWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDM 618
+WNA+I YA HG EA+ F +M+ S GI P H TF VL+AC+H GLVD+ F
Sbjct: 477 TWNAMIGGYAFHGNASEALNLFGSMK-SNGIYPSHITFVSVLNACAHAGLVDEAKAQFVS 535
Query: 619 MVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLR 678
M+++Y P ++H+S +V++ G EEA +I F + + +L AC + N+
Sbjct: 536 MMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVG 595
Query: 679 LGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWIGT 737
L + A + + + + YVLL N+ A G W+EA+ +R M K+ G SW+ +
Sbjct: 596 LAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVDS 654
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 153/647 (23%), Positives = 264/647 (40%), Gaps = 111/647 (17%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N L + RS E+ +F ++ + +T+ T +T I+ R A + +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTV-----TWNTMISGYVKRREMNQARKLFDVMP 98
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERA---FAEIEYPDDYSWTTMLSASTRLG 140
+ T N+++S Y + +E A F E+ D +SW TM+S +
Sbjct: 99 KRDVVTW--------NTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNR 150
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP-----DGY 195
+G+AL LF++MP R+ V+ W+A+IT NG D A LFR M P G
Sbjct: 151 RIGEALLLFEKMPERNAVS-WSAMITGF-CQNGEVDSAVVLFRKMPVKDSSPLCALVAGL 208
Query: 196 TFTSMLSLCSVELLDFGRHV---------------------------------------- 215
LS + L +G V
Sbjct: 209 IKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDD 268
Query: 216 HSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVD 275
H R F NS+I Y G VV A +F +++ RD +++N MIDG V V
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD--RDTISWNTMIDGYVHVS 326
Query: 276 RNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATM 335
R EDAF +F +M DA++ N +
Sbjct: 327 RMEDAFALFSEMPNR----------------------------------DAHSW--NMMV 350
Query: 336 TMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEF 395
+ Y+ G V A++ FE+ E+ VSWN +I+ + + + A+ +++M G +PD
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 396 TYGSLLGASDSLQVVEM---VHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLP 452
T SLL AS L + + +H ++ K + V V N+LI Y R G I + +IF +
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 453 YK-SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGK 511
K +I+WN +I G+ +G + L F ++ + + P+ K
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 512 -QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQ 569
Q + + ++ ++LV + + G + ++ + +M + D W AL+ A
Sbjct: 531 AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRI 590
Query: 570 HGQGKEAVCCFEAMQISPGIEPDHAT-FTIVLSACSHVGLVDDGTRI 615
+ A EAM +EP+ +T + ++ + + +GL D+ +++
Sbjct: 591 YNNVGLAHVAAEAMS---RLEPESSTPYVLLYNMYADMGLWDEASQV 634
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 219 bits (557), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 240/512 (46%), Gaps = 44/512 (8%)
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKT 322
YN MI V +NE F ++ M + SP TF+ +M + S L Q I +
Sbjct: 102 VYNTMISA-VSSSKNE-CFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHCHIIVS 159
Query: 323 G-FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILT 381
G + N+ + Y G A+ +F RM D+ S+N+MI + ++ + A+
Sbjct: 160 GCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKL 219
Query: 382 YLKMRRVGIEPDEFTYGSLL---GASDSLQVVEMVHSLLSKIG----------------- 421
Y KM GIEPDE+T SLL G +++ + VH + + G
Sbjct: 220 YFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMY 279
Query: 422 --------------LMKVEVL---NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIIS 464
MK + + N+++ + R G + A +F +P + L+SWN+++
Sbjct: 280 FKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLF 339
Query: 465 GFLTNGCPLQGLEQ--FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
G+ GC + + + + + +KP+ HG+ VHG ++R
Sbjct: 340 GYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQL 399
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEA 582
+ L +AL+ MY KCG ++ + VF ++D W ++I+ A HG G++A+ F
Sbjct: 400 KGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGR 459
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRS 642
MQ G+ P++ T VL+ACSH GLV++G +F+ M + +GF P +H+ +VDLL R+
Sbjct: 460 MQ-EEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRA 518
Query: 643 GYLEEAERLIKGGYFGANSNICW-SLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLL 701
G +EEA+ +++ S W S+ SAC ++ + LL+ + YVLL
Sbjct: 519 GRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLL 578
Query: 702 SNICAAAGQWEEAANLRDMMREFGTTKQPGCS 733
SNI A G+W + R+ M G K G S
Sbjct: 579 SNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 159/341 (46%), Gaps = 20/341 (5%)
Query: 23 LNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQL 82
N ++ + E+LKL+ ++ S + PD YT+ + + + + G +
Sbjct: 200 FNVMIVGYAKQGFSLEALKLYFKM-VSDGIEPDEYTVLSLLVCCGHL----SDIRLGKGV 254
Query: 83 HAHAIRTGLKAHSHV--ANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
H R G S++ +N+LL +Y K ++ +RAF ++ D SW TM+ RLG
Sbjct: 255 HGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLG 314
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI-GVRPDGYTFTS 199
+ A +FDQMP R V+ WN+++ +LF +M + V+PD T S
Sbjct: 315 DMEAAQAVFDQMPKRDLVS-WNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVS 373
Query: 200 MLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
++S + L GR VH +VIR + ++LI MY CG + A+ VF A
Sbjct: 374 LISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFK--TATE 431
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQ 318
+D + +MI GL + A +F MQ+ +P T ++V+++CS G +
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS--HSGLVEEGL 489
Query: 319 SI------KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
+ K GFD T + + + G+V EA++I ++
Sbjct: 490 HVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQK 530
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 212/505 (41%), Gaps = 71/505 (14%)
Query: 19 QILKLNHLLATLTRSN-------QHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRP 71
QI++ N + T S + E+L L + + T P+ + +T I+A ++++
Sbjct: 56 QIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN 115
Query: 72 AATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPD-----D 126
FG L++ IR + + L L + L+ V++ I +
Sbjct: 116 EC----FG--LYSSMIRHRVSPDRQ---TFLYLMKASSFLSEVKQIHCHIIVSGCLSLGN 166
Query: 127 YSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQ 186
Y W +++ LG+ G A K+F +MP+ +V+ +N +I A G A L+ M
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPH-PDVSSFNVMIVGY-AKQGFSLEALKLYFKMV 224
Query: 187 KIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVV--NSLITMYFNCGC 243
G+ PD YT S+L C + + G+ VH + R G + ++++ N+L+ MYF C
Sbjct: 225 SDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKE 284
Query: 244 VVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM---------------- 287
A + F ++ +D ++N M+ G VR+ E A +F M
Sbjct: 285 SGLAKRAFDAMKK--KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYS 342
Query: 288 QKAC-----------------FSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAY 327
+K C P T VS++S ++ L G I+
Sbjct: 343 KKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD 402
Query: 328 TAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
+++A + MY G + A +F+ E+D+ W MI+ + A+ + +M+
Sbjct: 403 AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 388 VGIEPDEFTYGSLLGASDSLQVVE----MVHSLLSKIGL-MKVEVLNSLIAAYCRNGRIN 442
G+ P+ T ++L A +VE + + + K G + E SL+ CR GR+
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVE 522
Query: 443 WALQIF-SNLPYKSLIS-WNTIISG 465
A I +P + S W +I+S
Sbjct: 523 EAKDIVQKKMPMRPSQSMWGSILSA 547
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 208/415 (50%), Gaps = 40/415 (9%)
Query: 360 VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA-----SDSLQVVEMVH 414
VSW I++ + A + M G+EP+ T+ +LL S S + +++H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 415 SLLSKIGLMKVEVL---------------------------------NSLIAAYCRNGRI 441
K+GL + V+ N++I Y R+G++
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 442 NWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXX 501
+ A ++F +P + LISW +I+GF+ G + L F + + +KP+
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 502 XXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWN 561
G VH Y+L F + + + N+L+ +Y +CG ++ + VF M KR +SWN
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 562 ALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVN 621
++I +A +G E++ F MQ G +PD TFT L+ACSHVGLV++G R F +M
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQ-EKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 622 IYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHG-NLRLG 680
Y P ++H+ C+VDL R+G LE+A +L++ N + SL +AC+ HG N+ L
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLA 395
Query: 681 RMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ + L + + + S YV+LSN+ AA G+WE A+ +R M+ G KQPG S I
Sbjct: 396 ERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSI 450
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 9/294 (3%)
Query: 16 SSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATA 75
+SE + + LTR+ + E+ K F+ + + + P+H T ++ + + A
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDM-TLAGVEPNHITFIALLSGCGDFTSGSEA 90
Query: 76 TTFGNQLHAHAIRTGL-KAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G+ LH +A + GL + H V +++ +Y+K F +E + +W TM+
Sbjct: 91 --LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
R G V +A K+FD+MP R ++ W A+I G+ + A FR+MQ GV+PD
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLIS-WTAMINGF-VKKGYQEEALLWFREMQISGVKPDY 206
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
+ L+ C+ + L FG VH V+ F V NSLI +Y CGCV A QVF
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
+E R V++N++I G ++ V FR MQ+ F P TF +++CS
Sbjct: 267 MEK--RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 161/354 (45%), Gaps = 45/354 (12%)
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQA-----Q 316
V++ + I+ L R R +A F DM A P TF++++S C G +A
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 317 AQSIKTGFDA-YTAVNNATMTMYSCFGK-------------------------------V 344
+ K G D + V A + MYS G+ V
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 345 NEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS 404
+ A +F++M ERDL+SW MI+ F ++ E A+L + +M+ G++PD + L A
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 405 DSLQVVEM---VHS-LLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWN 460
+L + VH +LS+ V V NSLI YCR G + +A Q+F N+ ++++SWN
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 461 TIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR- 519
++I GF NG + L F + KP+A G + + I++
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIMKC 335
Query: 520 -HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHG 571
+ S I LV +Y++ G L+ +L + +M +K + + +L++A + HG
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 128/305 (41%), Gaps = 40/305 (13%)
Query: 454 KSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN--AYXXXXXXXXXXXXXXXXHGK 511
++ +SW + I+ NG + ++FS + ++PN + G
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 512 QVHGYILRHGFS-SEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQH 570
+HGY + G + + +G A++ MY+K G + VF+ M +++++WN +I Y +
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 571 GQ-------------------------------GKEAVCCFEAMQISPGIEPDHATFTIV 599
GQ +EA+ F MQIS G++PD+
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPDYVAIIAA 212
Query: 600 LSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGA 659
L+AC+++G + G + +++ F +V + ++DL R G +E A ++
Sbjct: 213 LNACTNLGALSFGLWVHRYVLS-QDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN--MEK 269
Query: 660 NSNICW-SLFSACAAHGNLRLGRMVARLLLEKDHNNPSV-YVLLSNICAAAGQWEEAANL 717
+ + W S+ AA+GN + R + EK +V + C+ G EE
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRY 329
Query: 718 RDMMR 722
+M+
Sbjct: 330 FQIMK 334
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 243/482 (50%), Gaps = 9/482 (1%)
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKAC-FSPMEATFVSVMSSC---SSLRVGCQAQA 317
VT + I+ LV +R +AF +F ++ C F +T+ +++ +C S+R +
Sbjct: 88 VTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYG 147
Query: 318 QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
+ GF+ + N + M+ G + +A+ +F+ + ER+L S+ +IS F
Sbjct: 148 FMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVE 207
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGLMKVEVLN-SLIA 433
A + M + + T+ +L AS S+ V + +H K+G++ ++ LI
Sbjct: 208 AFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLID 267
Query: 434 AYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYX 493
Y + G I A F +P K+ ++WN +I+G+ +G + L + ++ + + +
Sbjct: 268 MYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFT 327
Query: 494 XXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMV 553
KQ H ++R+GF SEI ALV Y+K G +D + VF+ +
Sbjct: 328 LSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP 387
Query: 554 KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT 613
+++ ISWNAL+ YA HG+G +AV FE M I+ + P+H TF VLSAC++ GL + G
Sbjct: 388 RKNIISWNALMGGYANHGRGTDAVKLFEKM-IAANVAPNHVTFLAVLSACAYSGLSEQGW 446
Query: 614 RIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAA 673
IF M ++G P H++C+++LLGR G L+EA I+ N+ +L +AC
Sbjct: 447 EIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRM 506
Query: 674 HGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCS 733
NL LGR+VA L YV++ N+ + G+ EAA + + + G + P C+
Sbjct: 507 QENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACT 566
Query: 734 WI 735
W+
Sbjct: 567 WV 568
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 188/404 (46%), Gaps = 21/404 (5%)
Query: 178 AFDLFRDMQ-----KIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVV 231
AF+LF ++ K+GV T+ +++ C ++ + + V+ ++ +GF ++
Sbjct: 106 AFELFEILEIRCSFKVGVS----TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 232 NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA- 290
N ++ M+ CG ++DA ++F E+ R+ +Y ++I G V +AF +F+ M +
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPE--RNLYSYYSIISGFVNFGNYVEAFELFKMMWEEL 219
Query: 291 --CFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQ 348
C + A + + S+ VG Q ++K G T V+ + MYS G + +A+
Sbjct: 220 SDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDAR 279
Query: 349 NIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ 408
FE M E+ V+WN +I+ + +E A+ MR G+ D+FT ++ S L
Sbjct: 280 CAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLA 339
Query: 409 VVEMV---HSLLSKIGLMKVEVLNS-LIAAYCRNGRINWALQIFSNLPYKSLISWNTIIS 464
+E+ H+ L + G V N+ L+ Y + GR++ A +F LP K++ISWN ++
Sbjct: 340 KLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMG 399
Query: 465 GFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFS 523
G+ +G ++ F ++ + PN G ++ + HG
Sbjct: 400 GYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIK 459
Query: 524 SEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTIS-WNALISA 566
++ + + G LD ++ + T++ W AL++A
Sbjct: 460 PRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 191/404 (47%), Gaps = 27/404 (6%)
Query: 87 IRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSASTRLGHV 142
IR K ++L+ + + + V+R + + P+ Y +L + G +
Sbjct: 115 IRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMI 174
Query: 143 GDALKLFDQMPNRSNVAVWNAIITRCGADN-GHDDVAFDLFRDMQKIGVRPDGYTFTSML 201
DA +LFD++P R N+ + +II+ G N G+ AF+LF+ M + + +TF ML
Sbjct: 175 IDARRLFDEIPER-NLYSYYSIIS--GFVNFGNYVEAFELFKMMWEELSDCETHTFAVML 231
Query: 202 SLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRD 260
+ + + G+ +H ++ G + T V LI MY CG + DA F + +
Sbjct: 232 RASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPE--KT 289
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATF---VSVMSSCSSLRVGCQAQA 317
V +N +I G +E+A + DM+ + S + T + + + + L + QA A
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Query: 318 QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
I+ GF++ N A + YS +G+V+ A+ +F+++ ++++SWN ++ +
Sbjct: 350 SLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTD 409
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGASD----SLQVVEMVHSLLSKIGLMKVEVLN--SL 431
A+ + KM + P+ T+ ++L A S Q E+ S +S++ +K ++ +
Sbjct: 410 AVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLS-MSEVHGIKPRAMHYACM 468
Query: 432 IAAYCRNGRINWALQIFSNLPYKSLIS-WNTIISGFLTNGCPLQ 474
I R+G ++ A+ P K+ ++ W ++ N C +Q
Sbjct: 469 IELLGRDGLLDEAIAFIRRAPLKTTVNMWAALL-----NACRMQ 507
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 158/378 (41%), Gaps = 53/378 (14%)
Query: 3 KCWFSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTA 62
+C F TT++ N+++A E+L L + S + D +TLS
Sbjct: 279 RCAFECMPEKTTVA------WNNVIAGYALHGYSEEALCLLYDMRDS-GVSIDQFTLSIM 331
Query: 63 ITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE 122
I S T+ A T Q HA IR G ++ +L+ Y+K + + F ++
Sbjct: 332 IRIS--TKLAKLELT--KQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP 387
Query: 123 YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVA----VWNAIITRCGADNGHDDVA 178
+ SW ++ G DA+KLF++M +NVA + A+++ C A +G +
Sbjct: 388 RKNIISWNALMGGYANHGRGTDAVKLFEKMIA-ANVAPNHVTFLAVLSAC-AYSGLSEQG 445
Query: 179 FDLFRDMQKI-GVRPDGYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLIT 236
+++F M ++ G++P + M+ L + LLD IR L T VN
Sbjct: 446 WEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEA----IAFIRRAPLKTT--VNMWAA 499
Query: 237 MYFNC--------GCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQ 288
+ C G VV A +++G L ++V M + + + E A V+
Sbjct: 500 LLNACRMQENLELGRVV-AEKLYGMGPEKLGNYVVMYNMYNSMGKT--AEAAGVL----- 551
Query: 289 KACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAV--------NNATMTMYSC 340
+E+ +S+M +C+ + VG Q + FD+Y + M S
Sbjct: 552 ----ETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISE 607
Query: 341 FGKVNEAQNIFERMEERD 358
+G E Q++ ++E++
Sbjct: 608 YGYSEEEQHLLPDVDEKE 625
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 216 bits (550), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 179/325 (55%), Gaps = 6/325 (1%)
Query: 414 HSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCP 472
H L K G + V + +SL+ Y +G + A ++F +P ++++SW +ISGF
Sbjct: 143 HCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRV 202
Query: 473 LQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNAL 532
L+ +S + + PN Y G+ VH L G S + + N+L
Sbjct: 203 DICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSL 262
Query: 533 VTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPD 592
++MY KCG L + +F+ +D +SWN++I+ YAQHG +A+ FE M G +PD
Sbjct: 263 ISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPD 322
Query: 593 HATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI 652
T+ VLS+C H GLV +G + F++M +G P ++H+SC+VDLLGR G L+EA LI
Sbjct: 323 AITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELI 381
Query: 653 KGGYFGANSNICWSLFSACAAHGNLRLGRMVA--RLLLEKDHNNPSVYVLLSNICAAAGQ 710
+ NS I SL +C HG++ G A RL+LE D + +V L+N+ A+ G
Sbjct: 382 ENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPD--CAATHVQLANLYASVGY 439
Query: 711 WEEAANLRDMMREFGTTKQPGCSWI 735
W+EAA +R +M++ G PGCSWI
Sbjct: 440 WKEAATVRKLMKDKGLKTNPGCSWI 464
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 150/310 (48%), Gaps = 12/310 (3%)
Query: 301 SVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER 357
S + SC R G ++K GF + + ++ + +Y G+V A +FE M ER
Sbjct: 125 SAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPER 184
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVEMVH 414
++VSW MIS F QE + + Y KMR+ +P+++T+ +LL A S +L VH
Sbjct: 185 NVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVH 244
Query: 415 SLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPL 473
+GL + + NSLI+ YC+ G + A +IF K ++SWN++I+G+ +G +
Sbjct: 245 CQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAM 304
Query: 474 QGLEQFSALL-NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNAL 532
Q +E F ++ + KP+A G++ + HG E++ + L
Sbjct: 305 QAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCL 364
Query: 533 VTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEP 591
V + + G L +L + M +K +++ W +L+ + HG + A + +EP
Sbjct: 365 VDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI---RAAEERLMLEP 421
Query: 592 DHATFTIVLS 601
D A + L+
Sbjct: 422 DCAATHVQLA 431
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 164/319 (51%), Gaps = 22/319 (6%)
Query: 172 NGHDDVAFDLFRDMQKIGVRPDGYTF-----TSMLSLCSVELLDF--GRHVHSVVIRSGF 224
NG V ++ + V+ DG++F +S + C + DF G H + ++ GF
Sbjct: 93 NGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNR-DFRTGSGFHCLALKGGF 151
Query: 225 LARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMF 284
++ + +SL+ +Y + G V +AY+VF E+ R+ V++ AMI G + R + ++
Sbjct: 152 ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPE--RNVVSWTAMISGFAQEWRVDICLKLY 209
Query: 285 RDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCF 341
M+K+ P + TF +++S+C+ +L G Q++ G +Y ++N+ ++MY
Sbjct: 210 SKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKC 269
Query: 342 GKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI-LTYLKMRRVGIEPDEFTYGSL 400
G + +A IF++ +D+VSWN MI+ + Q L AI L L M + G +PD TY +
Sbjct: 270 GDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGV 329
Query: 401 LGASDSLQVVE---MVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL 456
L + +V+ +L+++ GL ++ + L+ R G + AL++ N+P K
Sbjct: 330 LSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKP- 388
Query: 457 ISWNTIISGFLTNGCPLQG 475
N++I G L C + G
Sbjct: 389 ---NSVIWGSLLFSCRVHG 404
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 60/313 (19%)
Query: 55 DHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASV 114
D Y LS+A+ + R T + F H A++ G + ++ +SL+ LY +
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGF----HCLALKGGFISDVYLGSSLVVLYRDS------ 168
Query: 115 ERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGH 174
G V +A K+F++MP R NV W A+I+ A
Sbjct: 169 -------------------------GEVENAYKVFEEMPER-NVVSWTAMISGF-AQEWR 201
Query: 175 DDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNS 233
D+ L+ M+K P+ YTFT++LS C+ L GR VH + G + + NS
Sbjct: 202 VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 234 LITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFR-DMQKACF 292
LI+MY CG + DA+++F + +D V++N+MI G + A +F M K+
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSN--KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 293 SPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVN----NATMTMYSC-------F 341
P T++ V+SSC A +K G + + + YSC F
Sbjct: 320 KPDAITYLGVLSSCR--------HAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRF 371
Query: 342 GKVNEAQNIFERM 354
G + EA + E M
Sbjct: 372 GLLQEALELIENM 384
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 145/368 (39%), Gaps = 86/368 (23%)
Query: 40 LKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVAN 99
LKL++++ S T P+ YT + ++A + A G +H + GLK++ H++N
Sbjct: 206 LKLYSKMRKS-TSDPNDYTFTALLSACT----GSGALGQGRSVHCQTLHMGLKSYLHISN 260
Query: 100 SLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVA 159
SL+S+Y K DL R F + D SW +M++ + G A++LF+ M
Sbjct: 261 SLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM------- 313
Query: 160 VWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVV 219
M K G +PD T+ +LS C H+ +
Sbjct: 314 -------------------------MPKSGTKPDAITYLGVLSSCR----------HAGL 338
Query: 220 IRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT-YNAMIDGLVRVDRNE 278
++ G +FN E GL+ + Y+ ++D L R +
Sbjct: 339 VKEG------------RKFFNL-----------MAEHGLKPELNHYSCLVDLLGRFGLLQ 375
Query: 279 DAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTAVNNATM 335
+A + +M P + S++ SC + G +A + + D A +
Sbjct: 376 EALELIENMP---MKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDC-AATHVQLA 431
Query: 336 TMYSCFGKVNEAQNIFERMEERDL-----VSW---NIMISMFFQENLNETAILTYLKMRR 387
+Y+ G EA + + M+++ L SW N + MF E+ + +L + +
Sbjct: 432 NLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLH 491
Query: 388 VGIEPDEF 395
I+ EF
Sbjct: 492 CLIDHMEF 499
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 160/557 (28%), Positives = 253/557 (45%), Gaps = 60/557 (10%)
Query: 192 PDGYTFTSMLSLC--SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA-- 247
PD F S++ C + L RHVH+ ++R G L+ + V L++ C ++ +
Sbjct: 27 PDESHFISLIHACKDTASL----RHVHAQILRRGVLS-SRVAAQLVS----CSSLLKSPD 77
Query: 248 --YQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS 305
+F E R+ NA+I GL R E + F M + P TF V+ S
Sbjct: 78 YSLSIFRNSEE--RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKS 135
Query: 306 CSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFE----RMEERD 358
S L +G A ++K D + V + + MY+ G++ A +FE R+++
Sbjct: 136 NSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKES 195
Query: 359 LVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLS 418
++ WN++I+ + + A + M E GS
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSM-------PERNSGSW------------------ 230
Query: 419 KIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQ 478
++LI Y +G +N A Q+F +P K+++SW T+I+GF G +
Sbjct: 231 ----------STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAIST 280
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK 538
+ +L LKPN Y G ++HGYIL +G + ++G ALV MYAK
Sbjct: 281 YFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAK 340
Query: 539 CGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTI 598
CG LD + VF+ M +D +SW A+I +A HG+ +A+ CF M S G +PD F
Sbjct: 341 CGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYS-GEKPDEVVFLA 399
Query: 599 VLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFG 658
VL+AC + VD G FD M Y P++ H+ +VDLLGR+G L EA L++
Sbjct: 400 VLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPIN 459
Query: 659 ANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLR 718
+ +L+ AC AH R V++ LLE D Y+ L A+ G ++ R
Sbjct: 460 PDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRR 519
Query: 719 DMMREFGTTKQPGCSWI 735
+++ + G S+I
Sbjct: 520 LSLQKRIKERSLGWSYI 536
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 128/273 (46%), Gaps = 12/273 (4%)
Query: 97 VANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRS 156
+ N L++ Y +A+D+ F + + SW+T++ G + A +LF+ MP +
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK- 256
Query: 157 NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVE-LLDFGRHV 215
NV W +I + G + A + +M + G++P+ YT ++LS CS L G +
Sbjct: 257 NVVSWTTLINGF-SQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
Query: 216 HSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVD 275
H ++ +G ++ +L+ MY CG + A VF + +D +++ AMI G
Sbjct: 316 HGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH--KDILSWTAMIQGWAVHG 373
Query: 276 RNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTAVNN 332
R A FR M + P E F++V+++C S + +G S++ + + +
Sbjct: 374 RFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNF-FDSMRLDYAIEPTLKH 432
Query: 333 ATMT--MYSCFGKVNEAQNIFERME-ERDLVSW 362
+ + GK+NEA + E M DL +W
Sbjct: 433 YVLVVDLLGRAGKLNEAHELVENMPINPDLTTW 465
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 52 LRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDL 111
L+P+ YT++ ++A + + A G ++H + + G+K + +L+ +YAK +L
Sbjct: 289 LKPNEYTIAAVLSACSKS----GALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 112 ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQM---PNRSNVAVWNAIITRC 168
F+ + + D SWT M+ G A++ F QM + + V+ A++T C
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 169 GADNGHDDVAFDLFRDMQ 186
++ D+ + F M+
Sbjct: 405 -LNSSEVDLGLNFFDSMR 421
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/476 (30%), Positives = 231/476 (48%), Gaps = 50/476 (10%)
Query: 307 SSLRVGCQAQAQSIKTGFD--AYTAVNNATMTMYSCFGKVNEAQNIFER--MEERDLVSW 362
S LR G + A +G + ++NA Y+ G++ AQ +F+ + E+D V W
Sbjct: 20 SFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDW 79
Query: 363 NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ---VVEMVHSLLSK 419
++S F + L ++ +++MRR +E D+ + L G L+ + H + K
Sbjct: 80 TTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVK 139
Query: 420 IG-LMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTI---------------- 462
+G L V+V N+L+ Y + G ++ +IF L KS++SW +
Sbjct: 140 MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREV 199
Query: 463 ---------------ISGFLTNGCPLQGLEQFSALL-NTPLKPNAYXXXXXXXXXXXXXX 506
++G+L G + LE + ++ N
Sbjct: 200 FHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGN 259
Query: 507 XXHGKQVHGYILRHGFS-------SEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTIS 559
G+ VH Y L+ ++ +G ALV MYAKCG++D S+ VF M KR+ ++
Sbjct: 260 LVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVT 319
Query: 560 WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
WNAL S A HG+G+ + F Q+ ++PD TFT VLSACSH G+VD+G R F +
Sbjct: 320 WNALFSGLAMHGKGRMVIDMFP--QMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL 377
Query: 620 VNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRL 679
YG P VDH++C+VDLLGR+G +EEAE L++ N + SL +C+ HG + +
Sbjct: 378 -RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEI 436
Query: 680 GRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ R L++ N +L+SN+ A G+ + A LR +R+ G K PG S I
Sbjct: 437 AERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSI 492
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 196/460 (42%), Gaps = 91/460 (19%)
Query: 79 GNQLHAHAIRTGLK--AHSHVANSLLSLYAKAEDLASVERAFAEIEY--PDDYSWTTMLS 134
G +LHA +GLK S+++N+L YA + ++ + ++ F EI D+ WTT+LS
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+ +R G + +++KLF +M R V + DDV
Sbjct: 85 SFSRYGLLVNSMKLFVEM-RRKRVEI--------------DDV----------------- 112
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
+ + +C+ +E L F + H V ++ G L V N+L+ MY CG V + ++F E
Sbjct: 113 -SVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEE 171
Query: 254 VEAGLRDHVTYNAMIDGLVR---VDRNEDAFVMFRDMQKACFSPMEA------------- 297
+E + V++ ++D +V+ ++R + F + ++ M A
Sbjct: 172 LEE--KSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLE 229
Query: 298 ----------------TFVSVMSSCS---SLRVGCQAQAQSIKT----GFDAY---TAVN 331
T S++S+C+ +L VG ++K G +A V
Sbjct: 230 LLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVG 289
Query: 332 NATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIE 391
A + MY+ G ++ + N+F M +R++V+WN + S I + +M R ++
Sbjct: 290 TALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVK 348
Query: 392 PDEFTYGSLLGASDSLQVVE----MVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQI 447
PD+ T+ ++L A +V+ HSL KV+ ++ R G I A +
Sbjct: 349 PDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEIL 408
Query: 448 FSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
+P + N ++ G L C + G + + + L
Sbjct: 409 MREMP----VPPNEVVLGSLLGSCSVHGKVEIAERIKREL 444
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 164/401 (40%), Gaps = 52/401 (12%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
LL++ +R S+KLF ++ + D ++ A F Q H
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRKR-VEIDDVSVVCLFGVCAKLEDLG----FAQQGHGV 136
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
A++ G+ V N+L+ +Y K ++ V+R F E+E SWT +L + +
Sbjct: 137 AVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERG 196
Query: 146 LKLFDQMPNRSNVAVWNAIIT-RCGADNGHDDVAFDLFRDMQ-KIGVRPDGYTFTSMLSL 203
++F +MP R+ VA W ++ GA G +L +M + G + T SMLS
Sbjct: 197 REVFHEMPERNAVA-WTVMVAGYLGA--GFTREVLELLAEMVFRCGHGLNFVTLCSMLSA 253
Query: 204 CSVEL-LDFGRHVHSVVIRSGFLARTS-------VVNSLITMYFNCGCVVDAYQVFGEVE 255
C+ L GR VH ++ + V +L+ MY CG + + VF +
Sbjct: 254 CAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR 313
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQA 315
R+ VT+NA+ GL + MF M + P + TF +V+S+CS
Sbjct: 314 K--RNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACS-------- 362
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
+ + G+ + ++ Y KV+ + M+ + + L
Sbjct: 363 HSGIVDEGWRCFH-----SLRFYGLEPKVDH---------------YACMVDLLGRAGLI 402
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSL 416
E A + MR + + P+E GSLLG+ VE+ +
Sbjct: 403 EEAEIL---MREMPVPPNEVVLGSLLGSCSVHGKVEIAERI 440
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/427 (18%), Positives = 174/427 (40%), Gaps = 51/427 (11%)
Query: 212 GRHVHSVVIRSGF--LARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMID 269
G+ +H+V+ SG R+ + N+L Y + G +V A ++F E+ +D+V + ++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 270 GLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDA 326
R ++ +F +M++ + + V + C+ L Q ++K G
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 327 YTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMR 386
V NA M MY G V+E + IFE +EE+ +VSW +++ + E + +M
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 387 RVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIG------------------------- 421
LGA + +V+E++ ++ + G
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 422 -----LMKVEVL-------------NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTII 463
+K E++ +L+ Y + G I+ ++ +F + +++++WN +
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF 324
Query: 464 SGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFS 523
SG +G ++ F ++ +KP+ G + + +G
Sbjct: 325 SGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLE 383
Query: 524 SEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEA-VCCFE 581
++ +V + + G ++ + + M V + + +L+ + + HG+ + A E
Sbjct: 384 PKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRE 443
Query: 582 AMQISPG 588
+Q+SPG
Sbjct: 444 LIQMSPG 450
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 206/397 (51%), Gaps = 6/397 (1%)
Query: 344 VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+N A +IF +++ +N MI + E A+ Y +M + G EPD FTY LL A
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 404 SDSLQVV---EMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISW 459
L+ + + +H + K+GL V V NSLI Y R G + + +F L K+ SW
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 460 NTIISGFLTNGCPLQGLEQFSALLN-TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYIL 518
++++S G + L F + + T LK G +HG++L
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261
Query: 519 RHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVC 578
R+ I + +LV MY KCG LD +L +F M KR+ ++++A+IS A HG+G+ A+
Sbjct: 262 RNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALR 321
Query: 579 CFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDL 638
F M I G+EPDH + VL+ACSH GLV +G R+F M+ P+ +H+ C+VDL
Sbjct: 322 MFSKM-IKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDL 380
Query: 639 LGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVY 698
LGR+G LEEA I+ N I + S C N+ LG++ A+ LL+ +NP Y
Sbjct: 381 LGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDY 440
Query: 699 VLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+L+SN+ + W++ A R + G + PG S +
Sbjct: 441 LLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIV 477
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 42/319 (13%)
Query: 54 PDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLAS 113
PD++T + A + + G Q+H + GL+A V NSL+++Y + ++
Sbjct: 130 PDNFTYPCLLKACTRLK----SIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMEL 185
Query: 114 VERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNG 173
F ++E SW++M+SA +G + L LF M + +N+
Sbjct: 186 SSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKA------------- 232
Query: 174 HDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNS 233
+ +++L+ + L+ G +H ++R+ V S
Sbjct: 233 ------------------EESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTS 274
Query: 234 LITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFS 293
L+ MY CGC+ A +F ++E R+++TY+AMI GL E A MF M K
Sbjct: 275 LVDMYVKCGCLDKALHIFQKMEK--RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 332
Query: 294 PMEATFVSVMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNATMT-MYSCFGKVNEAQN 349
P +VSV+++CS ++ G + A+ +K G TA + + + G + EA
Sbjct: 333 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 392
Query: 350 IFERME-ERDLVSWNIMIS 367
+ + E++ V W +S
Sbjct: 393 TIQSIPIEKNDVIWRTFLS 411
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 147/298 (49%), Gaps = 13/298 (4%)
Query: 178 AFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLIT 236
A + +M + G PD +T+ +L C+ ++ + G+ +H V + G A V NSLI
Sbjct: 116 ALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLIN 175
Query: 237 MYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPM 295
MY CG + + VF ++E+ + ++++M+ + + ++FR M +
Sbjct: 176 MYGRCGEMELSSAVFEKLES--KTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAE 233
Query: 296 EATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFE 352
E+ VS + +C+ +L +G ++ + V + + MY G +++A +IF+
Sbjct: 234 ESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQ 293
Query: 353 RMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE- 411
+ME+R+ ++++ MIS E+A+ + KM + G+EPD Y S+L A +V+
Sbjct: 294 KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKE 353
Query: 412 --MVHSLLSKIGLMK--VEVLNSLIAAYCRNGRINWALQIFSNLPY-KSLISWNTIIS 464
V + + K G ++ E L+ R G + AL+ ++P K+ + W T +S
Sbjct: 354 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 144/321 (44%), Gaps = 12/321 (3%)
Query: 257 GLRDHVTY--NAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRV 311
G+ D T+ N MI G V V E+A + +M + P T+ ++ +C+ S+R
Sbjct: 91 GIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIRE 150
Query: 312 GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQ 371
G Q Q K G +A V N+ + MY G++ + +FE++E + SW+ M+S
Sbjct: 151 GKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAG 210
Query: 372 ENLNETAILTYLKM-RRVGIEPDEFTYGSLLGA---SDSLQVVEMVHS-LLSKIGLMKVE 426
+ +L + M ++ +E S L A + +L + +H LL I + +
Sbjct: 211 MGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNII 270
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
V SL+ Y + G ++ AL IF + ++ ++++ +ISG +G L FS ++
Sbjct: 271 VQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEG 330
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG-FSSEISLGNALVTMYAKCGSLDGS 545
L+P+ G++V +L+ G LV + + G L+ +
Sbjct: 331 LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEA 390
Query: 546 LGVFNAM-VKRDTISWNALIS 565
L ++ ++++ + W +S
Sbjct: 391 LETIQSIPIEKNDVIWRTFLS 411
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 223/478 (46%), Gaps = 39/478 (8%)
Query: 297 ATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNE--AQNIFERM 354
++ +S + C +L Q ++ G D + + + G + A+ + E +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 355 EERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL------- 407
+ R+ W +I + E + AI Y MR+ I P FT+ +LL A ++
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGR 169
Query: 408 ----------------------------QVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNG 439
+ ++ + ++ V LIAAY R G
Sbjct: 170 QFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVG 229
Query: 440 RINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
+ A ++F +LP K +++W +++GF N P + LE F + + ++ +
Sbjct: 230 NMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYIS 289
Query: 500 XXXXXXXXXHGKQVHGYILRHGFS--SEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDT 557
+ + + G+S + +G+AL+ MY+KCG+++ ++ VF +M ++
Sbjct: 290 ACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNV 349
Query: 558 ISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFD 617
+++++I A HG+ +EA+ F M I+P+ TF L ACSH GLVD G ++FD
Sbjct: 350 FTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFD 409
Query: 618 MMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNL 677
M +G P+ DH++C+VDLLGR+G L+EA LIK + + +L AC H N
Sbjct: 410 SMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNP 469
Query: 678 RLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ + A L E + + Y+LLSN+ A+AG W +R +++E G K P SW+
Sbjct: 470 EIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 156/356 (43%), Gaps = 42/356 (11%)
Query: 52 LRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDL 111
+ P +T S + A + G Q HA R +V N+++ +Y K E +
Sbjct: 145 ITPVSFTFSALLKACGTMKD----LNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESI 200
Query: 112 ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD 171
+ F E+ D SWT +++A R+G++ A +LF+ +P + VA W A++T A
Sbjct: 201 DCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVA-WTAMVTGF-AQ 258
Query: 172 NGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSV 230
N A + F M+K G+R D T +S C+ + + + +SG+ V
Sbjct: 259 NAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHV 318
Query: 231 V--NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM- 287
V ++LI MY CG V +A VF + ++ TY++MI GL R ++A +F M
Sbjct: 319 VIGSALIDMYSKCGNVEEAVNVFMSMNN--KNVFTYSSMILGLATHGRAQEALHLFHYMV 376
Query: 288 QKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
+ P TFV + +CS G Q + + FD +MY FG
Sbjct: 377 TQTEIKPNTVTFVGALMACS--HSGLVDQGRQV---FD----------SMYQTFGV---- 417
Query: 348 QNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
RD + M+ + + + A+ ++ + +EP +G+LLGA
Sbjct: 418 ------QPTRD--HYTCMVDLLGRTGRLQEALEL---IKTMSVEPHGGVWGALLGA 462
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 177/434 (40%), Gaps = 50/434 (11%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAY--QVFGEVEAGLRDHVTYNAMIDG 270
+ +H V+R G ++ LI G +D Y +V V+ R+ + A+I G
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQ--FRNPFLWTAVIRG 123
Query: 271 LVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAY 327
+ ++A M+ M+K +P+ TF +++ +C +++ +G Q AQ+ + +
Sbjct: 124 YAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF 183
Query: 328 TAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSW------------------------- 362
V N + MY ++ A+ +F+ M ERD++SW
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 363 ------NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL---QVVEMV 413
M++ F Q + A+ + +M + GI DE T + A L + +
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 414 HSLLSKIGLMK---VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNG 470
+ K G V + ++LI Y + G + A+ +F ++ K++ +++++I G T+G
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHG 363
Query: 471 CPLQGLEQFSALL-NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISL 528
+ L F ++ T +KPN G+QV + + G
Sbjct: 364 RAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH 423
Query: 529 GNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISP 587
+V + + G L +L + M V+ W AL+ A H + A E +
Sbjct: 424 YTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLF--- 480
Query: 588 GIEPDHATFTIVLS 601
+EPD I+LS
Sbjct: 481 ELEPDIIGNYILLS 494
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 162/368 (44%), Gaps = 45/368 (12%)
Query: 127 YSWTTMLSASTRLGHVGD--ALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRD 184
Y T ++ T+LG D A ++ + + R N +W A+I R A G D A ++
Sbjct: 82 YILTKLIRTLTKLGVPMDPYARRVIEPVQFR-NPFLWTAVI-RGYAIEGKFDEAIAMYGC 139
Query: 185 MQKIGVRPDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGC 243
M+K + P +TF+++L C +++ L+ GR H+ R V N++I MY C
Sbjct: 140 MRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCES 199
Query: 244 VVDAYQVFGEVEA-----------------------------GLRDHVTYNAMIDGLVRV 274
+ A +VF E+ +D V + AM+ G +
Sbjct: 200 IDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQN 259
Query: 275 DRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDA--YTA 329
+ ++A F M+K+ E T +S+C+ L + +A + K+G+ +
Sbjct: 260 AKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVV 319
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI-LTYLKMRRV 388
+ +A + MYS G V EA N+F M +++ +++ MI + A+ L + + +
Sbjct: 320 IGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQT 379
Query: 389 GIEPDEFTY-GSLLGASDS---LQVVEMVHSLLSKIGLMKV-EVLNSLIAAYCRNGRINW 443
I+P+ T+ G+L+ S S Q ++ S+ G+ + ++ R GR+
Sbjct: 380 EIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQE 439
Query: 444 ALQIFSNL 451
AL++ +
Sbjct: 440 ALELIKTM 447
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 51/299 (17%)
Query: 394 EFTYGSLLGASD---SLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNG--RINWALQI 447
E SL+ D +L ++ +H + + GL +L LI + G +A ++
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRV 105
Query: 448 FSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXX 507
+ +++ W +I G+ G + + + + + P ++
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 508 XHGKQVHGYILR-HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISA 566
G+Q H R GF + +GN ++ MY KC S+D + VF+ M +RD ISW LI+A
Sbjct: 166 NLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAA 224
Query: 567 Y-------------------------------AQHGQGKEAVCCFEAMQISPGIEPDHAT 595
Y AQ+ + +EA+ F+ M+ S GI D T
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS-GIRADEVT 283
Query: 596 FTIVLSACSHVGLVDDGTRIFDMMVNIY---GFVPSVDHF---SCIVDLLGRSGYLEEA 648
+SAC+ +G ++ D V I G+ PS DH S ++D+ + G +EEA
Sbjct: 284 VAGYISACAQLG----ASKYADRAVQIAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEA 337
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 210/407 (51%), Gaps = 38/407 (9%)
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL----------------------GA 403
+S+ + N + AI Y K+ + +PD FT+ +L G
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 404 SDSLQVV----EMVHS---------LLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSN 450
S+ VV +M S + ++ + V V N+L+A Y + G ++ A +
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 451 LP--YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXX 508
+P ++ +SW +ISG+ +G + +E F +L ++P+
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLE 267
Query: 509 HGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYA 568
G+++ Y+ G + +SL NA++ MYAK G++ +L VF + +R+ ++W +I+ A
Sbjct: 268 LGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLA 327
Query: 569 QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPS 628
HG G EA+ F M + G+ P+ TF +LSACSHVG VD G R+F+ M + YG P+
Sbjct: 328 THGHGAEALAMFNRM-VKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Query: 629 VDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLL 688
++H+ C++DLLGR+G L EA+ +IK F AN+ I SL +A H +L LG L+
Sbjct: 387 IEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELI 446
Query: 689 EKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ + NN Y+LL+N+ + G+W+E+ +R+MM+ G K G S I
Sbjct: 447 KLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSI 493
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 180/375 (48%), Gaps = 47/375 (12%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAII---TRCGADNGHDDVAFDL 181
D+ + + A + GH+ A +F P N + N +I + N H +A +
Sbjct: 46 DNLNVAKFIEACSNAGHLRYAYSVFTHQPC-PNTYLHNTMIRALSLLDEPNAHS-IAITV 103
Query: 182 FRDMQKIGVRPDGYTFTSMLSLCSVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYF 239
+R + + +PD +TF +L + +V + D FGR +H V+ GF + VV LI MYF
Sbjct: 104 YRKLWALCAKPDTFTFPFVLKI-AVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYF 162
Query: 240 NCGCVVDAYQVF---------------------GEVEAG----------LRDHVTYNAMI 268
+CG + DA ++F GE++ +R+ V++ +I
Sbjct: 163 SCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVI 222
Query: 269 DGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFD 325
G + R +A +F+ M P E T ++V+S+C+ SL +G + + G +
Sbjct: 223 SGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMN 282
Query: 326 AYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKM 385
++NNA + MY+ G + +A ++FE + ER++V+W +I+ A+ + +M
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM 342
Query: 386 RRVGIEPDEFTYGSLLGASDSLQVVE----MVHSLLSKIGLM-KVEVLNSLIAAYCRNGR 440
+ G+ P++ T+ ++L A + V+ + +S+ SK G+ +E +I R G+
Sbjct: 343 VKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGK 402
Query: 441 INWALQIFSNLPYKS 455
+ A ++ ++P+K+
Sbjct: 403 LREADEVIKSMPFKA 417
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 22/338 (6%)
Query: 27 LATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHA 86
L+ L N H+ ++ ++ ++ + +PD +T + + + FG Q+H
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWAL-CAKPDTFTFPFVLKIAVRV----SDVWFGRQIHGQV 142
Query: 87 IRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDAL 146
+ G + HV L+ +Y L + F E+ D W +L+ ++G + +A
Sbjct: 143 VVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 147 KLFDQMP--NRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC 204
L + MP R+ V+ W +I+ A +G A ++F+ M V PD T ++LS C
Sbjct: 203 SLLEMMPCWVRNEVS-WTCVISGY-AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSAC 260
Query: 205 S-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
+ + L+ G + S V G S+ N++I MY G + A VF V R+ VT
Sbjct: 261 ADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE--RNVVT 318
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTG 323
+ +I GL +A MF M KA P + TF++++S+CS VG + +
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACS--HVGWVDLGKRLFNS 376
Query: 324 FDAYTAVNNATMTMYSCF-------GKVNEAQNIFERM 354
+ + + + Y C GK+ EA + + M
Sbjct: 377 MRSKYGI-HPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 148/383 (38%), Gaps = 75/383 (19%)
Query: 405 DSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRN-GRINWALQIFSNLPYKSLISWNTII 463
++L+ ++ H + GL + + + C N G + +A +F++ P + NT+I
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI 85
Query: 464 SGFLTNGCPLQ---GLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
P + + L KP+ + G+Q+HG ++
Sbjct: 86 RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNAL----------------- 563
GF S + + L+ MY CG L + +F+ M+ +D WNAL
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 205
Query: 564 ----------------ISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG 607
IS YA+ G+ EA+ F+ M + +EPD T VLSAC+ +G
Sbjct: 206 EMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM-LMENVEPDEVTLLAVLSACADLG 264
Query: 608 LVDDGTRI-------------------FDMMVNIYGFVPSVDHFSC-----------IVD 637
++ G RI DM ++D F C I+
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 638 LLGRSGYLEEA----ERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHN 693
L G+ EA R++K G N ++ SAC+ G + LG+ + + K
Sbjct: 325 GLATHGHGAEALAMFNRMVKAG-VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383
Query: 694 NPSV--YVLLSNICAAAGQWEEA 714
+P++ Y + ++ AG+ EA
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREA 406
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 221/446 (49%), Gaps = 9/446 (2%)
Query: 298 TFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTM--YSCFGKVNEAQNIFERME 355
V ++ C+S++ + + I G + ++ N + S G ++ AQ +F+ +
Sbjct: 7 VIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFD 66
Query: 356 ERDLVS-WNIMISMFFQENLNETAILTYLKMRRVGI-EPDEFTYGSLLGASDSLQVVEM- 412
S WN +I F + +IL Y +M + PD FT+ L + + ++ +
Sbjct: 67 SDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 413 --VHSLLSKIGLMKVEVL-NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
+H + + G + ++ SL+ Y NG + A ++F +P + L+SWN +I F
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV 186
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG 529
G Q L + + N + ++Y G +H S + +
Sbjct: 187 GLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVS 246
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
NAL+ MYAKCGSL+ ++GVFN M KRD ++WN++I Y HG G EA+ F M ++ G+
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM-VASGV 305
Query: 590 EPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
P+ TF +L CSH GLV +G F++M + + P+V H+ C+VDL GR+G LE +
Sbjct: 306 RPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSL 365
Query: 650 RLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAG 709
+I + + +L +C H NL LG + + L++ + N YVL+++I +AA
Sbjct: 366 EMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAAN 425
Query: 710 QWEEAANLRDMMREFGTTKQPGCSWI 735
+ A++R ++R PG SWI
Sbjct: 426 DAQAFASMRKLIRSHDLQTVPGWSWI 451
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 174/404 (43%), Gaps = 63/404 (15%)
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
++H+H I GL+ H + N LL A +S + L
Sbjct: 23 KIHSHVIINGLQHHPSIFNHLLRFCA--------------------------VSVTGSLS 56
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLF--RDMQKIGVRPDGYTFT 198
H FD P+ S+ WN +I G N + LF R + RPD +TF
Sbjct: 57 HAQLLFDHFDSDPSTSD---WNYLIR--GFSNSSSPLNSILFYNRMLLSSVSRPDLFTFN 111
Query: 199 SMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
L C ++ + +H VIRSGFL V SL+ Y G V A +VF E+
Sbjct: 112 FALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMP-- 169
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQ 314
+RD V++N MI V + A M++ M T V+++SSC S+L +G
Sbjct: 170 VRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVM 229
Query: 315 AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENL 374
+ ++ V+NA + MY+ G + A +F M +RD+++WN MI +
Sbjct: 230 LHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGH 289
Query: 375 NETAILTYLKMRRVGIEPDEFTY-GSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNS--- 430
AI + KM G+ P+ T+ G LLG S H L K G+ E+++S
Sbjct: 290 GVEAISFFRKMVASGVRPNAITFLGLLLGCS---------HQGLVKEGVEHFEIMSSQFH 340
Query: 431 ----------LIAAYCRNGRINWALQ-IFSNLPYKSLISWNTII 463
++ Y R G++ +L+ I+++ ++ + W T++
Sbjct: 341 LTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/456 (30%), Positives = 223/456 (48%), Gaps = 22/456 (4%)
Query: 301 SVMSSCSSLRVGCQAQAQSIKTGFDAYTA---VNNATMTMYSCFGKVNEAQNIFERMEER 357
S+ +CS + Q A +++T + A + + + S F VN A +F+ +E
Sbjct: 53 SLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 112
Query: 358 DLVSWNIMISMFFQE-NLNETAILTYLKMRRVG-IEPDEFTYGSLLGASD---SLQVVEM 412
WN +I + + E A + Y KM G PD+ T+ +L A +
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 413 VHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGC 471
VH + K G V V N LI Y G ++ A ++F +P +SL+SWN++I + G
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 472 PLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH---GFSSEISL 528
L+ F + + +P+ Y G H ++LR + ++ +
Sbjct: 233 YDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 529 GNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAM-QISP 587
N+L+ MY KCGSL + VF M KRD SWNA+I +A HG+ +EA+ F+ M
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 588 GIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEE 647
+ P+ TF +L AC+H G V+ G + FDMMV Y P+++H+ CIVDL+ R+GY+ E
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Query: 648 AERLIKGGYFGANSNICWSLFSACAAHG-NLRLGRMVARLLLEKDHNNPS-------VYV 699
A ++ ++ I SL AC G ++ L +AR ++ +N S YV
Sbjct: 412 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 471
Query: 700 LLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
LLS + A+A +W + +R +M E G K+PGCS I
Sbjct: 472 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSI 507
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 194/407 (47%), Gaps = 35/407 (8%)
Query: 101 LLSLYAKAEDLASVERAFA---EIEYPDD----YSWTTMLSASTRLGHVGDALKLFDQMP 153
+ SL D++ +++ A YP++ + + +L S+ V A ++FD +
Sbjct: 51 IFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 154 NRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG-VRPDGYTFTSMLSLCSVELLDF- 211
N S+ +WN +I C D + AF L+R M + G PD +TF +L C+ + F
Sbjct: 111 NHSSF-MWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY-IFGFS 168
Query: 212 -GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDG 270
G+ VH +++ GF V N LI +Y +CGC+ A +VF E+ R V++N+MID
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPE--RSLVSWNSMIDA 226
Query: 271 LVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQA---QSIKTGF 324
LVR + A +FR+MQ++ F P T SV+S+C+ SL +G A A +
Sbjct: 227 LVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 325 DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLK 384
V N+ + MY G + A+ +F+ M++RDL SWN MI F E A+ + +
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 345
Query: 385 M--RRVGIEPDEFTYGSLLGASDSLQVVE--------MVHSLLSKIGLMKVEVLNSLIAA 434
M +R + P+ T+ LL A + V MV + L + LIA
Sbjct: 346 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA- 404
Query: 435 YCRNGRINWALQIFSNLPYKS-LISWNTIISGFLTNGCPLQGLEQFS 480
R G I A+ + ++P K + W +++ G ++ E+ +
Sbjct: 405 --RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIA 449
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 108/281 (38%), Gaps = 61/281 (21%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ ++ N ++ L R ++ +L+LF ++ S PD YT+ + ++A A
Sbjct: 212 MPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS--FEPDGYTMQSVLSACA----GLG 265
Query: 75 ATTFGNQLHAHAIR---TGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTT 131
+ + G HA +R + V NSL+ +Y K L E+ F ++ D SW
Sbjct: 266 SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNA 325
Query: 132 MLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR 191
M+ G +A+ FD+M ++ + VR
Sbjct: 326 MILGFATHGRAEEAMNFFDRMVDK-------------------------------RENVR 354
Query: 192 PDGYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
P+ TF +L C+ ++ GR +++R + + Y GC+VD
Sbjct: 355 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD------YCIEPALEHY---GCIVDLIAR 405
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC 291
G + ID ++ + DA V++R + AC
Sbjct: 406 AGYITEA----------IDMVMSMPMKPDA-VIWRSLLDAC 435
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 147/533 (27%), Positives = 243/533 (45%), Gaps = 49/533 (9%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLI--TMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDG 270
+ +H+ ++ +G ++ SVV LI G + A+++F E+ D N ++ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKP--DVSICNHVLRG 86
Query: 271 LVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAY 327
+ + E ++ +M+K SP TF V+ +CS L G + ++ GF
Sbjct: 87 SAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLN 146
Query: 328 TAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
V NA + ++ G + A +F+ + V+W+ M S + + + A+ +
Sbjct: 147 EYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLF----- 201
Query: 388 VGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQI 447
DE Y + N +I + ++ A ++
Sbjct: 202 -----DEMPYKDQVA-------------------------WNVMITGCLKCKEMDSAREL 231
Query: 448 FSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXX 507
F K +++WN +ISG++ G P + L F + + P+
Sbjct: 232 FDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Query: 508 XHGKQVHGYILRHG-FSSEISLG----NALVTMYAKCGSLDGSLGVFNAMVKRDTISWNA 562
GK++H YIL SS I +G NAL+ MYAKCGS+D ++ VF + RD +WN
Sbjct: 292 ETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNT 351
Query: 563 LISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNI 622
LI A H + ++ FE MQ + P+ TF V+ ACSH G VD+G + F +M ++
Sbjct: 352 LIVGLALH-HAEGSIEMFEEMQ-RLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDM 409
Query: 623 YGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRM 682
Y P++ H+ C+VD+LGR+G LEEA ++ N+ + +L AC +GN+ LG+
Sbjct: 410 YNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKY 469
Query: 683 VARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
LL + YVLLSNI A+ GQW+ +R M + K G S I
Sbjct: 470 ANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 181/430 (42%), Gaps = 85/430 (19%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
NH+L +S + +++ L+T++ + PD YT + + A + + F H
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEK-RGVSPDRYTFTFVLKACSKLEWRSNGFAF----H 135
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+R G + +V N+L+ +A DL F + +W++M S + G +
Sbjct: 136 GKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKID 195
Query: 144 DALKLFDQMPNRSNVAVWNAIITRC-----------------------------GADN-G 173
+A++LFD+MP + VA WN +IT C G N G
Sbjct: 196 EAMRLFDEMPYKDQVA-WNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCG 254
Query: 174 HDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSV-ELLDFGRHVHSVVIR-----SGFLAR 227
+ A +F++M+ G PD T S+LS C+V L+ G+ +H ++ S
Sbjct: 255 YPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVG 314
Query: 228 TSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
T + N+LI MY CG + A +VF V+ RD T+N +I GL + E + MF +M
Sbjct: 315 TPIWNALIDMYAKCGSIDRAIEVFRGVKD--RDLSTWNTLIVGLA-LHHAEGSIEMFEEM 371
Query: 288 QKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
Q+ P E TF+ V+ +CS G+V+E
Sbjct: 372 QRLKVWPNEVTFIGVILACSH--------------------------------SGRVDEG 399
Query: 348 QNIFERME-----ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
+ F M E ++ + M+ M + E A + M+ IEP+ + +LLG
Sbjct: 400 RKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK---IEPNAIVWRTLLG 456
Query: 403 ASDSLQVVEM 412
A VE+
Sbjct: 457 ACKIYGNVEL 466
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 135/300 (45%), Gaps = 16/300 (5%)
Query: 406 SLQVVEMVHSLLSKIGLM-KVEVLNSLI--AAYCRNGRINWALQIFSNLPYKSLISWNTI 462
+++ ++ +H+ + GLM + V+ LI A+ G + +A ++F +P + N +
Sbjct: 24 NIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHV 83
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
+ G + P + + ++ + + P+ Y +G HG ++RHGF
Sbjct: 84 LRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF 143
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEA 582
+ NAL+ +A CG L + +F+ K ++W+++ S YA+ G+ EA+ F+
Sbjct: 144 VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRS 642
M D + ++++ C +D +FD V ++ ++
Sbjct: 204 MPYK-----DQVAWNVMITGCLKCKEMDSARELFDRFTE-----KDVVTWNAMISGYVNC 253
Query: 643 GYLEEAERLIKGGY-FGANSNIC--WSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYV 699
GY +EA + K G + ++ SL SACA G+L G+ + +LE + S+YV
Sbjct: 254 GYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYV 313
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 215/433 (49%), Gaps = 41/433 (9%)
Query: 344 VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+ A +F+ + E D++S +I F +E+ + A + ++ +GI P+EFT+G+++G+
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 404 SDSLQVVEM---VHSLLSKIGLM--------------------------------KVEVL 428
S + + V++ +H K+GL V +
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLK 488
+LI+ Y + AL +F +P +S+++WN +I GF G + + F +L +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 489 -PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH-GFSSEISLGNALVTMYAKCGSLDGSL 546
PN GK +H ++ G + + N+L++ Y+KCG+++ SL
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 547 GVFNAMV--KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
FN + +R+ +SWN++I YA +G+G+EAV FE M + P++ T VL AC+
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 605 HVGLVDDGTRIFDMMVNIYG--FVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSN 662
H GL+ +G F+ VN Y + ++H++C+VD+L RSG +EAE LIK
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 663 ICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMR 722
+L C H N RL ++ A +LE D + S YV+LSN +A W+ + +R M+
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 723 EFGTTKQPGCSWI 735
E G + GCSWI
Sbjct: 463 ETGLKRFTGCSWI 475
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 23/353 (6%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I ++ ++ + ++H E+ + F ++ +RP+ +T T I +S +R
Sbjct: 53 IPELDVISATAVIGRFVKESRHVEASQAFKRLLCL-GIRPNEFTFGTVIGSSTTSRD--- 108
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
G QLH +A++ GL ++ V +++L+ Y K L R F + P+ S T ++S
Sbjct: 109 -VKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLIS 167
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR-PD 193
+ +AL LF MP RS V WNA+I + G ++ A + F DM + GV P+
Sbjct: 168 GYLKKHEFEEALSLFRAMPERS-VVTWNAVIGGF-SQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 194 GYTFT-SMLSLCSVELLDFGRHVHSVVIRSGFLAR---TSVVNSLITMYFNCGCVVDAYQ 249
TF ++ ++ ++ G+ +H+ I+ FL + V NSLI+ Y CG + D+
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAIK--FLGKRFNVFVWNSLISFYSKCGNMEDSLL 283
Query: 250 VFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC-FSPMEATFVSVMSSCSS 308
F ++E R+ V++N+MI G R E+A MF M K P T + V+ +C+
Sbjct: 284 AFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNH 343
Query: 309 LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCF-------GKVNEAQNIFERM 354
+ Q + Y N + Y+C G+ EA+ + + M
Sbjct: 344 AGL-IQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 168/370 (45%), Gaps = 48/370 (12%)
Query: 142 VGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML 201
+ +A K+FD++P ++ A+I R ++ H + A F+ + +G+RP+ +TF +++
Sbjct: 43 IRNAHKVFDEIPELDVISA-TAVIGRFVKESRHVE-ASQAFKRLLCLGIRPNEFTFGTVI 100
Query: 202 -SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG-------- 252
S + + G+ +H ++ G + V ++++ Y + DA + F
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVV 160
Query: 253 -------------EVEAGL--------RDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKA 290
E E L R VT+NA+I G + RNE+A F DM ++
Sbjct: 161 SITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 291 CFSPMEATF---VSVMSSCSSLRVGCQAQAQSIK-TGFDAYTAVNNATMTMYSCFGKVNE 346
P E+TF ++ +S+ +S G A +IK G V N+ ++ YS G + +
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 347 AQNIFERMEE--RDLVSWNIMISMFFQENLNETAILTYLKM-RRVGIEPDEFTYGSLLGA 403
+ F ++EE R++VSWN MI + E A+ + KM + + P+ T +L A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 404 SDSLQVVEMVHSLLSKI-------GLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL 456
+ +++ + +K L+++E ++ R+GR A ++ ++P
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 457 IS-WNTIISG 465
I W ++ G
Sbjct: 401 IGFWKALLGG 410
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 205/392 (52%), Gaps = 7/392 (1%)
Query: 349 NIFERMEERDLVSWNIMISMFFQENLNETAILTYLKM-RRVGIEPDEFTYGSLL---GAS 404
++F M R++ SWNI+I F + +I +L+M R + PD+FT +L AS
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 405 DSLQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTII 463
+ +++H L K+G + V ++L+ Y G++ A ++F ++P + + + +
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 464 SGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFS 523
G++ G + GL F + + ++ HGK VHG+ +R
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 524 SEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAM 583
++LGNA+ MY KC LD + VF M +RD ISW++LI Y G + F+ M
Sbjct: 268 LGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
Query: 584 QISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSG 643
+ GIEP+ TF VLSAC+H GLV+ F +M Y VP + H++ + D + R+G
Sbjct: 328 -LKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAG 385
Query: 644 YLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSN 703
LEEAE+ ++ + + ++ S C +GN+ +G VAR L++ S YV L+
Sbjct: 386 LLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAG 445
Query: 704 ICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ +AAG+++EA +LR M+E +K PGCS I
Sbjct: 446 LYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 40/291 (13%)
Query: 18 EQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATT 77
I N ++ +RS ++S+ LF ++ +RPD +TL + A + +R A +
Sbjct: 96 RNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKS--- 152
Query: 78 FGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAST 137
G+ +H ++ G + V+++L+ +Y
Sbjct: 153 -GDLIHVLCLKLGFSSSLFVSSALVIMYVD------------------------------ 181
Query: 138 RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
+G + A KLFD MP R +V ++ A+ G + +FR+M G D
Sbjct: 182 -MGKLLHARKLFDDMPVRDSV-LYTAMFGGY-VQQGEAMLGLAMFREMGYSGFALDSVVM 238
Query: 198 TSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
S+L C + L G+ VH IR ++ N++ MY C + A+ VF V
Sbjct: 239 VSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVF--VNM 296
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
RD ++++++I G +F +F +M K P TF+ V+S+C+
Sbjct: 297 SRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACA 347
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 166/405 (40%), Gaps = 53/405 (13%)
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSLR---VGCQ 314
R+ ++N +I R + +F M +++C P + T ++ +CS+ R G
Sbjct: 96 RNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDL 155
Query: 315 AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENL 374
+K GF + V++A + MY GK+ A+ +F+ M RD V + M + Q+
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSL----LSKIGLMKVEVLNS 430
+ + +M G D SLL A L ++ S+ + + + + + N+
Sbjct: 216 AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNA 275
Query: 431 LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
+ Y + +++A +F N+ + +ISW+++I G+ +G + + F +L ++PN
Sbjct: 276 ITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPN 335
Query: 491 AYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFN 550
A +++ A G ++ S F
Sbjct: 336 AVTFL-----------------------------------GVLSACAHGGLVEKSWLYFR 360
Query: 551 AMVKRDTIS----WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
M + + + + ++ ++ G +EA E M ++PD A VLS C
Sbjct: 361 LMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMP----VKPDEAVMGAVLSGCKVY 416
Query: 607 GLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
G V+ G R+ ++ + S ++ + L +G +EAE L
Sbjct: 417 GNVEVGERVARELIQLKPRKAS--YYVTLAGLYSAAGRFDEAESL 459
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 158/576 (27%), Positives = 268/576 (46%), Gaps = 66/576 (11%)
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFN---------CGCVVDAYQV----FGEVEAGLRD 260
+H +I++G + +++ ++ + + CV Y V FGEVE D
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVE----D 85
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQA 317
+NA+I A ++ M + S + + V+ +CS L + G Q
Sbjct: 86 PFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 318 QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENL--- 374
KTG + + N + +Y G + ++ +F+RM +RD VS+N MI + + L
Sbjct: 146 FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVS 205
Query: 375 -NETAILTYLKMRRVGIEPDEFTYGSLL-GASDSLQVVEMVHSLLSKIGLMKVEVLNSLI 432
E L ++M+ + ++ S++ G + + V++ L + + + NS+I
Sbjct: 206 ARELFDLMPMEMKNL------ISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMI 259
Query: 433 AAYCRNGRIN----------------WALQI---------------FSNLPYKSLISWNT 461
Y ++GRI WA I F +P++ ++++N+
Sbjct: 260 DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS 319
Query: 462 IISGFLTNGCPLQGLEQFSAL-LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
+++G++ N ++ LE FS + + L P+ +H YI+
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 379
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCF 580
F LG AL+ MY+KCGS+ ++ VF + + WNA+I A HG G+ A
Sbjct: 380 QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 581 EAMQISP-GIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLL 639
+QI ++PD TF VL+ACSH GLV +G F++M + P + H+ C+VD+L
Sbjct: 440 --LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDIL 497
Query: 640 GRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYV 699
RSG +E A+ LI+ N I + +AC+ H G +VA+ L+ + NPS YV
Sbjct: 498 SRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYV 557
Query: 700 LLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
LLSN+ A+ G W++ +R MM+E K PGCSWI
Sbjct: 558 LLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 178/408 (43%), Gaps = 40/408 (9%)
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G Q+H +TGL + + N L+ LY K L + F + D S+ +M+ +
Sbjct: 140 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK 199
Query: 139 LGHVGDALKLFDQMP-NRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
G + A +LFD MP N+ WN++I+ + D+A LF DM + D ++
Sbjct: 200 CGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPE----KDLISW 255
Query: 198 TSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVN--SLITMYFNCGCVVDAYQVFGEVE 255
SM+ + GR + + R VV ++I Y G V A +F ++
Sbjct: 256 NSMID----GYVKHGR-IEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC-FSPMEATFVSVMSSCSSLRVGCQ 314
RD V YN+M+ G V+ + +A +F DM+K P + T V V+ + + L +
Sbjct: 311 H--RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 368
Query: 315 A---QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQ 371
A ++ F + A + MYS G + A +FE +E + + WN MI
Sbjct: 369 AIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 428
Query: 372 ENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNS- 430
L E+A L++ R+ ++PD+ T+ +L A HS L K GL+ E++
Sbjct: 429 HGLGESAFDMLLQIERLSLKPDDITFVGVLNACS--------HSGLVKEGLLCFELMRRK 480
Query: 431 ------------LIAAYCRNGRINWALQIFSNLPYK-SLISWNTIISG 465
++ R+G I A + +P + + + W T ++
Sbjct: 481 HKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTA 528
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 132/610 (21%), Positives = 244/610 (40%), Gaps = 85/610 (13%)
Query: 58 TLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAED--LASVE 115
T+ +I+++ + + + NQ+H I+TG+ +S++ ++ +A + LA
Sbjct: 7 TMECSISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFA 66
Query: 116 R-AFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGH 174
R F E S G V D +WNA+I +G
Sbjct: 67 RCVFHEYHV-----------CSFSFGEVEDPF-------------LWNAVIK--SHSHGK 100
Query: 175 DD-VAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVN 232
D A L M + GV D ++ + +L CS + + G +H + ++G + + N
Sbjct: 101 DPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQN 160
Query: 233 SLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFR------- 285
LI +Y CGC+ + Q+F + RD V+YN+MIDG V+ A +F
Sbjct: 161 CLIGLYLKCGCLGLSRQMFDRMPK--RDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMK 218
Query: 286 -------------------DMQKACFSPM-EATFVSVMSSCSS-LRVGCQAQAQSIKTGF 324
D+ F+ M E +S S ++ G A+ +
Sbjct: 219 NLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVM 278
Query: 325 DAYTAVNNATMT-MYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
V ATM Y+ G V+ A+ +F++M RD+V++N M++ + Q + A+ +
Sbjct: 279 PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFS 338
Query: 384 KMRRVG-IEPDEFT----------YGSLLGASD-SLQVVEMVHSLLSKIGLMKVEVLNSL 431
M + + PD+ T G L A D L +VE L K+G+ +L
Sbjct: 339 DMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGV-------AL 391
Query: 432 IAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
I Y + G I A+ +F + KS+ WN +I G +G + + LKP+
Sbjct: 392 IDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDD 451
Query: 492 YXXXXXXXXXXXXXXXXHGKQVHGYILR-HGFSSEISLGNALVTMYAKCGSLDGSLGVFN 550
G + R H + +V + ++ GS++ + +
Sbjct: 452 ITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIE 511
Query: 551 AM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLV 609
M V+ + + W ++A + H + + + + + G P +++ ++ + + G+
Sbjct: 512 EMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNP--SSYVLLSNMYASFGMW 569
Query: 610 DDGTRIFDMM 619
D R+ MM
Sbjct: 570 KDVRRVRTMM 579
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 185/361 (51%), Gaps = 6/361 (1%)
Query: 381 TYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGR 440
T+ ++ G++ D F SLL S + + G + NS++ AY + G
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 441 INWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL-LNTP----LKPNAYXXX 495
I+ A ++F +P +++ISW+ +I+G++ G + L+ F + L P ++PN +
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VK 554
GK VH YI ++ +I LG AL+ MYAKCGSL+ + VFNA+ K
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 555 RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTR 614
+D +++A+I A +G E F M S I P+ TF +L AC H GL+++G
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAH 674
F MM+ +G PS+ H+ C+VDL GRSG ++EAE I + I SL S
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 675 GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
G+++ + L+E D N YVLLSN+ A G+W E +R M G K PGCS+
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 735 I 735
+
Sbjct: 444 V 444
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 207/480 (43%), Gaps = 76/480 (15%)
Query: 33 SNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLK 92
S Q + ++ ++ + H + PD +T + + N G + HA + GL
Sbjct: 40 SPQRHSPISVYLRMRN-HRVSPDFHTFPFLLPSFHN----PLHLPLGQRTHAQILLFGLD 94
Query: 93 AHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQM 152
V SLL++Y+ DL S +R F + D +W ++++A + G + DA KLFD+M
Sbjct: 95 KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEM 154
Query: 153 PNRSNVAVWNAII---TRCGADNGHDDVAFDLFRDMQ-----KIGVRPDGYTFTSMLSLC 204
P R NV W+ +I CG A DLFR+MQ + VRP+ +T +++LS C
Sbjct: 155 PER-NVISWSCLINGYVMCGKYKE----ALDLFREMQLPKPNEAFVRPNEFTMSTVLSAC 209
Query: 205 S-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT 263
+ L+ G+ VH+ + + + +LI MY CG + A +VF + +D
Sbjct: 210 GRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL-GSKKDVKA 268
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKA-CFSPMEATFVSVMSSCSSLRVGCQAQAQSIKT 322
Y+AMI L ++ F +F +M + +P TFV ++ +C
Sbjct: 269 YSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHR------------- 315
Query: 323 GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER-----DLVSWNIMISMFFQENLNET 377
G +NE ++ F+ M E + + M+ ++ + L +
Sbjct: 316 -------------------GLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNS-----LI 432
A M +EPD +GSLL S L ++ L + L++++ +NS L
Sbjct: 357 AESFIASM---PMEPDVLIWGSLLSGSRMLGDIKTCEGALKR--LIELDPMNSGAYVLLS 411
Query: 433 AAYCRNGR------INWALQI--FSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
Y + GR I +++ + +P S + ++ F+ Q E+ A+L+
Sbjct: 412 NVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLD 471
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 122/312 (39%), Gaps = 46/312 (14%)
Query: 459 WNTIISGFLTNGCPLQGLEQFSALL---NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHG 515
WN II + N Q S L N + P+ + G++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 516 YILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQH----- 570
IL G + + +L+ MY+ CG L + VF+ +D +WN++++AYA+
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 571 --------------------------GQGKEAVCCFEAMQISPG----IEPDHATFTIVL 600
G+ KEA+ F MQ+ + P+ T + VL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 601 SACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGAN 660
SAC +G ++ G + ++ Y + + ++D+ + G LE A+R+ G+
Sbjct: 207 SACGRLGALEQGKWV-HAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA--LGSK 263
Query: 661 SNI-CWSLFSAC-AAHGNLRLGRMVARLLLEKDHNNPS--VYVLLSNICAAAGQWEEAAN 716
++ +S C A +G + + D+ NP+ +V + C G E +
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 717 LRDMM-REFGTT 727
MM EFG T
Sbjct: 324 YFKMMIEEFGIT 335
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 227/471 (48%), Gaps = 41/471 (8%)
Query: 304 SSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGK--VNEAQNIFERMEERDLVS 361
+ CS++R Q A IKTG + T V + + + C +N A +F R+ ++
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDT-VTASRVLAFCCASPSDMNYAYLVFTRINHKNPFV 91
Query: 362 WNIMISMFFQENLNETAILTYLKM--RRVGIEPDEFTYGSLLGA---------------- 403
WN +I F + + E AI ++ M ++P TY S+ A
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 404 -------SDSLQVVEMVHSLLSK----------IGLMKVEVL--NSLIAAYCRNGRINWA 444
DS M+H ++ +G++ +V+ NS+I + + G I+ A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 445 LQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXX 504
+F +P ++ +SWN++ISGF+ NG L+ F + +KP+ +
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 505 XXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALI 564
G+ +H YI+R+ F + AL+ MY KCG ++ L VF K+ WN++I
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 565 SAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYG 624
A +G + A+ F ++ S G+EPD +F VL+AC+H G V F +M Y
Sbjct: 332 LGLANNGFEERAMDLFSELERS-GLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYM 390
Query: 625 FVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVA 684
PS+ H++ +V++LG +G LEEAE LIK ++ I SL SAC GN+ + + A
Sbjct: 391 IEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAA 450
Query: 685 RLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ L + D + YVLLSN A+ G +EEA R +M+E K+ GCS I
Sbjct: 451 KCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 52/408 (12%)
Query: 13 TTISSEQILKLNHLLATLTRSNQHTESLKLFTQ-IHSSHTLRPDHYTLSTAITASANTRP 71
T I+ + N ++ +RS+ ++ +F + SS +++P T + A
Sbjct: 82 TRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQ 141
Query: 72 AATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTT 131
A G QLH I+ GL+ S + N++L +Y L R F + D +W +
Sbjct: 142 ARD----GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNS 197
Query: 132 MLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR 191
M+ + G + A LFD+MP R+ V+ WN++I+ NG A D+FR+MQ+ V+
Sbjct: 198 MIMGFAKCGLIDQAQNLFDEMPQRNGVS-WNSMISGF-VRNGRFKDALDMFREMQEKDVK 255
Query: 192 PDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
PDG+T S+L+ C+ + + GR +H ++R+ F + VV +LI MY CGC+ + V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 251 FGEVEAGLRDHVT-YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
F E + ++ +N+MI GL E A +F +++++ P +F+ V+++C
Sbjct: 316 F---ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC--- 369
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS-----WNI 364
A S G+V+ A F M+E+ ++ + +
Sbjct: 370 -------AHS----------------------GEVHRADEFFRLMKEKYMIEPSIKHYTL 400
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM 412
M+++ L E A ++ + +E D + SLL A + VEM
Sbjct: 401 MVNVLGGAGLLEEA---EALIKNMPVEEDTVIWSSLLSACRKIGNVEM 445
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 161/359 (44%), Gaps = 67/359 (18%)
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRL 139
Q+HA I+TGL + + A+ +L+ + P D ++ ++ TR+
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCAS---------------PSDMNYAYLV--FTRI 84
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDM--QKIGVRPDGYTF 197
H N VWN II R + + ++A +F DM V+P T+
Sbjct: 85 NH--------------KNPFVWNTII-RGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTY 129
Query: 198 TSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF----- 251
S+ + + GR +H +VI+ G + + N+++ MY CGC+++A+++F
Sbjct: 130 PSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIG 189
Query: 252 -----------GEVEAGL-------------RDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
G + GL R+ V++N+MI G VR R +DA MFR+M
Sbjct: 190 FDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM 249
Query: 288 QKACFSPMEATFVSVMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMTMYSCFGKV 344
Q+ P T VS++++C+ L Q + ++ F+ + V A + MY G +
Sbjct: 250 QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 345 NEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
E N+FE ++ L WN MI E A+ + ++ R G+EPD ++ +L A
Sbjct: 310 EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 187/457 (40%), Gaps = 71/457 (15%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD---AYQVFGEVEAGLRDHVTYNAMID 269
+ +H+ +I++G ++ T + ++ F C D AY VF + ++ +N +I
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLA--FCCASPSDMNYAYLVFTRINH--KNPFVWNTIIR 97
Query: 270 GLVRVDRNEDAFVMFRDM--QKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGF 324
G R E A +F DM P T+ SV + L R G Q IK G
Sbjct: 98 GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157
Query: 325 DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSW---------------------- 362
+ + + N + MY G + EA IF M D+V+W
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217
Query: 363 ---------NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMV 413
N MIS F + + A+ + +M+ ++PD FT SLL A L E
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 414 HSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
+ I + E V+ +LI YC+ G I L +F P K L WN++I G N
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANN 337
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHG-----YILRHGFSS 524
G + ++ FS L + L+P++ H +VH +++ +
Sbjct: 338 GFEERAMDLFSELERSGLEPDS------VSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 525 EISLGN--ALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQ---GKEAVC 578
E S+ + +V + G L+ + + M V+ DT+ W++L+SA + G K A
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451
Query: 579 CFEAMQISPGIEPDHATFTIVLS-ACSHVGLVDDGTR 614
C + + +PD ++LS A + GL ++
Sbjct: 452 CLKKL------DPDETCGYVLLSNAYASYGLFEEAVE 482
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 210/403 (52%), Gaps = 7/403 (1%)
Query: 337 MYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFT 396
M G + A +F M E+++V W MI+ + LN+ +++ + + E D
Sbjct: 37 MLCLMGVIASANKVFCEMVEKNVVLWTSMINGYL---LNKD-LVSARRYFDLSPERDIVL 92
Query: 397 YGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL 456
+ +++ + + SL ++ V N+++ Y G + ++F ++P +++
Sbjct: 93 WNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNV 152
Query: 457 ISWNTIISGFLTNGCPLQGLEQFSALLNT-PLKPNAYXXXXXXXXXXXXXXXXHGKQVHG 515
SWN +I G+ NG + L F +++ + PN GK VH
Sbjct: 153 FSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHK 212
Query: 516 YILRHGFSS-EISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGK 574
Y G++ ++++ NAL+ MY KCG+++ ++ VF + +RD ISWN +I+ A HG G
Sbjct: 213 YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 575 EAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSC 634
EA+ F M+ S GI PD TF VL AC H+GLV+DG F+ M + +P ++H C
Sbjct: 273 EALNLFHEMKNS-GISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 635 IVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNN 694
+VDLL R+G+L +A I A++ I +L A + + +G + L++ + N
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRN 391
Query: 695 PSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWIGT 737
P+ +V+LSNI AG++++AA L+ MR+ G K+ G SWI T
Sbjct: 392 PANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIET 434
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 7/214 (3%)
Query: 99 NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNV 158
N+++S Y + ++ F ++ D SW T+L +G + ++FD MP R NV
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPER-NV 152
Query: 159 AVWNAIITRCGADNGHDDVAFDLFRDMQKIG-VRPDGYTFTSMLSLCS-VELLDFGRHVH 216
WN +I + A NG F+ M G V P+ T T +LS C+ + DFG+ VH
Sbjct: 153 FSWNGLI-KGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 217 SVVIRSGF-LARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVD 275
G+ +V N+LI MY CG + A +VF ++ RD +++N MI+GL
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR--RDLISWNTMINGLAAHG 269
Query: 276 RNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
+A +F +M+ + SP + TFV V+ +C +
Sbjct: 270 HGTEALNLFHEMKNSGISPDKVTFVGVLCACKHM 303
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 153/365 (41%), Gaps = 55/365 (15%)
Query: 111 LASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGA 170
+AS + F E+ + WT+M++ + A + FD P R ++ +WN +I+
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPER-DIVLWNTMIS---- 98
Query: 171 DNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSV 230
GY ++ G + + + R +
Sbjct: 99 -----------------------GY-------------IEMGNMLEARSLFDQMPCRDVM 122
Query: 231 V-NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM-Q 288
N+++ Y N G + +VF ++ R+ ++N +I G + R + F+ M
Sbjct: 123 SWNTVLEGYANIGDMEACERVFDDMPE--RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD 180
Query: 289 KACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTA-VNNATMTMYSCFGKV 344
+ P +AT V+S+C+ L G G++ V NA + MY G +
Sbjct: 181 EGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAI 240
Query: 345 NEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS 404
A +F+ ++ RDL+SWN MI+ A+ + +M+ GI PD+ T+ +L A
Sbjct: 241 EIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCAC 300
Query: 405 DSLQVVE----MVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKS-LIS 458
+ +VE +S+ + +M ++E ++ R G + A++ + +P K+ +
Sbjct: 301 KHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVI 360
Query: 459 WNTII 463
W T++
Sbjct: 361 WATLL 365
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 88/235 (37%), Gaps = 50/235 (21%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + N L+ ++ + +E L F ++ ++ P+ T++ ++A A
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL----G 202
Query: 75 ATTFGNQLHAHAIRTGL-KAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
A FG +H + G K +V N+L+ +Y K + F I+ D SW TM+
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMI 262
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
+ GH +AL LF +M N G+ PD
Sbjct: 263 NGLAAHGHGTEALNLFHEMKNS---------------------------------GISPD 289
Query: 194 GYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVN--SLITMYFNCGCVVD 246
TF +L C H ++ G S+ S++ +CGCVVD
Sbjct: 290 KVTFVGVLCACK----------HMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVD 334
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 208/428 (48%), Gaps = 37/428 (8%)
Query: 344 VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIE-PDEFTYGSLLG 402
++ A +F ++ ++ +N +I + +L I Y ++ R E PD FT+ +
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 403 ASDSL---QVVEMVHSLLSKIG--------------LMKVEVL----------------- 428
+ SL + + VH L K G MK + L
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 429 -NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
NSL++ Y R G++ A +F + K+++SW +ISG+ GC ++ ++ F + +
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
+P+ GK +H Y R GF + + NAL+ MY+KCG + ++
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 548 VFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG 607
+F M +D ISW+ +IS YA HG A+ F MQ ++P+ TF +LSACSHVG
Sbjct: 298 LFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQ-RAKVKPNGITFLGLLSACSHVG 356
Query: 608 LVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSL 667
+ +G R FDMM Y P ++H+ C++D+L R+G LE A + K +S I SL
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416
Query: 668 FSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTT 727
S+C GNL + + L+E + + YVLL+NI A G+WE+ + LR M+R
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 728 KQPGCSWI 735
K PG S I
Sbjct: 477 KTPGGSLI 484
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 150/294 (51%), Gaps = 9/294 (3%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+S+ + N ++ T ++ + + ++++ Q+ PD +T + A +
Sbjct: 68 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA----SLG 123
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
+ G Q+H H + G + H N+L+ +Y K +DL + F E+ D SW ++LS
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
RLG + A LF M +++ V+ W A+I+ + + A D FR+MQ G+ PD
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVS-WTAMISGYTGIGCYVE-AMDFFREMQLAGIEPDE 241
Query: 195 YTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
+ S+L C+ + L+ G+ +H R GFL +T V N+LI MY CG + A Q+FG+
Sbjct: 242 ISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 301
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
+E +D ++++ MI G A F +MQ+A P TF+ ++S+CS
Sbjct: 302 MEG--KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACS 353
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 186/435 (42%), Gaps = 81/435 (18%)
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRL 139
+++A I GL S + ++ K ED+ R F ++ P+ + + +++ A T
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTS 199
D ++++ Q+ +S F+L PD +TF
Sbjct: 87 SLYCDVIRIYKQLLRKS----------------------FEL----------PDRFTFPF 114
Query: 200 MLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
M C S+ G+ VH + + G N+LI MY +VDA++VF E+
Sbjct: 115 MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYE-- 172
Query: 259 RDHVTYNAMIDGLVRVDRNE-------------------------------DAFVMFRDM 287
RD +++N+++ G R+ + + +A FR+M
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREM 232
Query: 288 QKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKV 344
Q A P E + +SV+ SC+ SL +G + + GF T V NA + MYS G +
Sbjct: 233 QLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVI 292
Query: 345 NEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS 404
++A +F +ME +D++SW+ MIS + AI T+ +M+R ++P+ T+ LL A
Sbjct: 293 SQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSAC 352
Query: 405 DSLQVVEMVHSLLSKIGLM--------KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL 456
V M L +M K+E LI R G++ A++I +P K
Sbjct: 353 SH---VGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPD 409
Query: 457 IS-WNTIISGFLTNG 470
W +++S T G
Sbjct: 410 SKIWGSLLSSCRTPG 424
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 178/401 (44%), Gaps = 47/401 (11%)
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFS-PMEATFVSVMSSCSSL---RVGCQAQAQS 319
YN++I D +++ + + F P TF + SC+SL +G Q
Sbjct: 76 YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 135
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMF---------- 369
K G + NA + MY F + +A +F+ M ERD++SWN ++S +
Sbjct: 136 CKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAK 195
Query: 370 --FQENLNET-------------------AILTYLKMRRVGIEPDEFTYGSLLGASDSLQ 408
F L++T A+ + +M+ GIEPDE + S+L + L
Sbjct: 196 GLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLG 255
Query: 409 VVEM---VHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIIS 464
+E+ +H + G +K V N+LI Y + G I+ A+Q+F + K +ISW+T+IS
Sbjct: 256 SLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMIS 315
Query: 465 GFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSS 524
G+ +G +E F+ + +KPN G + ++R +
Sbjct: 316 GYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD-MMRQDYQI 374
Query: 525 EISLGN--ALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFE 581
E + + L+ + A+ G L+ ++ + M +K D+ W +L+S+ G A+
Sbjct: 375 EPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALV--- 431
Query: 582 AMQISPGIEP-DHATFTIVLSACSHVGLVDDGTRIFDMMVN 621
AM +EP D + ++ + + +G +D +R+ M+ N
Sbjct: 432 AMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRN 472
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 216/408 (52%), Gaps = 8/408 (1%)
Query: 335 MTMYSCFGKVNEAQNIFERMEERDLVS---WNIMISMFFQENLNETAILTYLKMRRVGIE 391
+T++S +++ A+ IF+ + + L++ W M + + A++ Y+ M IE
Sbjct: 174 ITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIE 233
Query: 392 PDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEV----LNSLIAAYCRNGRINWALQI 447
P F+ L A L+ + + + ++I K +V N L+ Y +G + A ++
Sbjct: 234 PGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKV 293
Query: 448 FSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXX 507
F + +++++WN++IS + F + + +
Sbjct: 294 FDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAAL 353
Query: 508 XHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAY 567
GK++H IL+ ++ L N+L+ MY KCG ++ S VF+ M+ +D SWN +++ Y
Sbjct: 354 LTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCY 413
Query: 568 AQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVP 627
A +G +E + FE M I G+ PD TF +LS CS GL + G +F+ M + P
Sbjct: 414 AINGNIEEVINLFEWM-IESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Query: 628 SVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLL 687
+++H++C+VD+LGR+G ++EA ++I+ F +++I SL ++C HGN+ +G + A+ L
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Query: 688 LEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ +NP YV++SNI A A W+ +R+MM++ G K+ GCSW+
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWV 580
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 165/360 (45%), Gaps = 29/360 (8%)
Query: 131 TMLSASTRLGHVGDALKLFDQMPNRSNVA--VWNAIITRCGADNGHDDVAFDLFRDMQKI 188
T+ S RL A K+FD + + S + VW A+ + NG A ++ DM
Sbjct: 175 TLFSVCRRLDL---ARKIFDDVTDSSLLTEKVWAAMAIGY-SRNGSPRDALIVYVDMLCS 230
Query: 189 GVRPDGYTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
+ P ++ + L C V+L D GR +H+ +++ V N L+ +Y G D
Sbjct: 231 FIEPGNFSISVALKAC-VDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDD 289
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC 306
A +VF + R+ VT+N++I L + R + F +FR MQ+ AT +++ +C
Sbjct: 290 ARKVFDGMSE--RNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPAC 347
Query: 307 S---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
S +L G + AQ +K+ + N+ M MY G+V ++ +F+ M +DL SWN
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWN 407
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM 423
IM++ + E I + M G+ PD T+ +LL + E SL + M
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFER---M 464
Query: 424 KVEVLNS--------LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
K E S L+ R G+I A+++ +P+K S I G L N C L G
Sbjct: 465 KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSAS----IWGSLLNSCRLHG 520
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 173/397 (43%), Gaps = 24/397 (6%)
Query: 192 PDGYTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLART-SVVNSLITMYFNCGCVVDAYQ 249
P+ YT +L C S + L G + S+++ + L +++ LIT++ C + A +
Sbjct: 131 PEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 250 VFGEV-EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC-- 306
+F +V ++ L + AM G R DA +++ DM + P + + +C
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 307 -SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIM 365
LRVG AQ +K V N + +Y G ++A+ +F+ M ER++V+WN +
Sbjct: 249 LKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSL 308
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV----EMVHSLLSKIG 421
IS+ ++ + KM+ I T ++L A + + E+ +L
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 422 LMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSA 481
V +LNSL+ Y + G + ++ ++F + K L SWN +++ + NG + + F
Sbjct: 369 KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 482 LLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNA------LVTM 535
++ + + P+ G +G L +E + A LV +
Sbjct: 429 MIESGVAPDGITFVALLSGCSDT-----GLTEYGLSLFERMKTEFRVSPALEHYACLVDI 483
Query: 536 YAKCGSLDGSLGVFNAMVKRDTIS-WNALISAYAQHG 571
+ G + ++ V M + + S W +L+++ HG
Sbjct: 484 LGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 5/229 (2%)
Query: 426 EVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS---WNTIISGFLTNGCPLQGLEQFSAL 482
++L+ LI + R++ A +IF ++ SL++ W + G+ NG P L + +
Sbjct: 168 KLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDM 227
Query: 483 LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSL 542
L + ++P + G+ +H I++ + + N L+ +Y + G
Sbjct: 228 LCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLF 287
Query: 543 DGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSA 602
D + VF+ M +R+ ++WN+LIS ++ + E F MQ I AT T +L A
Sbjct: 288 DDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ-EEMIGFSWATLTTILPA 346
Query: 603 CSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
CS V + G I ++ P V + ++D+ G+ G +E + R+
Sbjct: 347 CSRVAALLTGKEIHAQILK-SKEKPDVPLLNSLMDMYGKCGEVEYSRRV 394
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+S ++ N L++ L++ + E LF ++ + TL+T + A +R AA
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE-EMIGFSWATLTTILPAC--SRVAAL 353
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
T G ++HA +++ K + NSL+ +Y K ++ R F + D SW ML+
Sbjct: 354 LT--GKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLN 411
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
C A NG+ + +LF M + GV PDG
Sbjct: 412 ---------------------------------CYAINGNIEEVINLFEWMIESGVAPDG 438
Query: 195 YTFTSMLSLCS 205
TF ++LS CS
Sbjct: 439 ITFVALLSGCS 449
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 224/429 (52%), Gaps = 14/429 (3%)
Query: 319 SIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETA 378
++K GF + T N + Y ++N A+ +F+ M E ++VSW +IS + + A
Sbjct: 55 TLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNA 114
Query: 379 ILTYLKMRR-VGIEPDEFTYGSLLGASDSL---QVVEMVHSLLSKIGLMK-VEVLNSLIA 433
+ + KM + P+E+T+ S+ A +L ++ + +H+ L GL + + V +SL+
Sbjct: 115 LSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVD 174
Query: 434 AYCRNGRINWALQIF-SNLPY-KSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL---K 488
Y + + A ++F S + Y ++++SW ++I+ + N + +E F + N L +
Sbjct: 175 MYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF-NAALTSDR 233
Query: 489 PNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGV 548
N + GK HG + R G+ S + +L+ MYAKCGSL + +
Sbjct: 234 ANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKI 293
Query: 549 FNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGL 608
F + IS+ ++I A A+HG G+ AV F+ M ++ I P++ T VL ACSH GL
Sbjct: 294 FLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM-VAGRINPNYVTLLGVLHACSHSGL 352
Query: 609 VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSN-ICW-S 666
V++G +M YG VP H++C+VD+LGR G ++EA L K GA + W +
Sbjct: 353 VNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGA 412
Query: 667 LFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGT 726
L SA HG + + ++ L++ + S Y+ LSN A +G WE++ +LR M+ G
Sbjct: 413 LLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGN 472
Query: 727 TKQPGCSWI 735
K+ CSWI
Sbjct: 473 VKERACSWI 481
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 158/357 (44%), Gaps = 41/357 (11%)
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
+T F N LH ++ G + + N L+ Y K +++ + + F E+ P+ SWT++
Sbjct: 42 STNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSV 101
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
+S +G +AL +F +M H+D V P
Sbjct: 102 ISGYNDMGKPQNALSMFQKM---------------------HEDRP-----------VPP 129
Query: 193 DGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
+ YTF S+ CS + G+++H+ + SG V +SL+ MY C V A +VF
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVF 189
Query: 252 GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSP-----MEATFVSVMSSC 306
+ R+ V++ +MI + R +A +FR A S M A+ +S SS
Sbjct: 190 DSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSL 249
Query: 307 SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMI 366
L+ G A + G+++ T V + + MY+ G ++ A+ IF R+ ++S+ MI
Sbjct: 250 GRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
Query: 367 SMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM 423
+ L E A+ + +M I P+ Y +LLG + +V+ L + LM
Sbjct: 310 MAKAKHGLGEAAVKLFDEMVAGRINPN---YVTLLGVLHACSHSGLVNEGLEYLSLM 363
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 156/345 (45%), Gaps = 59/345 (17%)
Query: 39 SLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVA 98
+L +F ++H + P+ YT ++ A + A + G +HA +GL+ + V+
Sbjct: 114 ALSMFQKMHEDRPVPPNEYTFASVFKACS----ALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 99 NSLLSLYAKAEDLASVERAF-AEIEYPDD-YSWTTMLSASTRLGHVGDALKLFDQMPNRS 156
+SL+ +Y K D+ + R F + I Y + SWT+M++A + +A++LF RS
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-----RS 224
Query: 157 NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC-SVELLDFGRHV 215
+NA +T R + + S++S C S+ L +G+
Sbjct: 225 ----FNAALT----------------------SDRANQFMLASVISACSSLGRLQWGKVA 258
Query: 216 HSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH--VTYNAMIDGLVR 273
H +V R G+ + T V SL+ MY CG + A ++F + R H ++Y +MI +
Sbjct: 259 HGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRI----RCHSVISYTSMIMAKAK 314
Query: 274 VDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQ-----AQAQSIKTGFD 325
E A +F +M +P T + V+ +CS + G + A+ +
Sbjct: 315 HGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSR 374
Query: 326 AYTAVNNATMTMYSCFGKVNEAQNIFERME---ERDLVSWNIMIS 367
YT V + M FG+V+EA + + +E E+ + W ++S
Sbjct: 375 HYTCV----VDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLS 415
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 9/211 (4%)
Query: 513 VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQ 572
+H L+ GF+S+ N LV Y K ++ + +F+ M + + +SW ++IS Y G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 573 GKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHF 632
+ A+ F+ M + P+ TF V ACS + G I + I G ++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARL-EISGLRRNIVVS 169
Query: 633 SCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SLFSACA----AHGNLRLGRMVARLL 687
S +VD+ G+ +E A R+ + + W S+ +A A H + L R
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF-NAA 228
Query: 688 LEKDHNNPSVYVLLSNICAAAG--QWEEAAN 716
L D N + + + C++ G QW + A+
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAH 259
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 38 ESLKLFTQIHSSHTL-RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSH 96
E+++LF +++ T R + + L++ I+A ++ +G H R G ++++
Sbjct: 217 EAIELFRSFNAALTSDRANQFMLASVISACSSL----GRLQWGKVAHGLVTRGGYESNTV 272
Query: 97 VANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPN-- 154
VA SLL +YAK L+ E+ F I S+T+M+ A + G A+KLFD+M
Sbjct: 273 VATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGR 332
Query: 155 -RSNVAVWNAIITRCGADNGHDDVAFDLFRDM-QKIGVRPDGYTFTSMLSLCSVELLD-F 211
N ++ C + +G + + M +K GV PD +T C V++L F
Sbjct: 333 INPNYVTLLGVLHAC-SHSGLVNEGLEYLSLMAEKYGVVPDSRHYT-----CVVDMLGRF 386
Query: 212 GR 213
GR
Sbjct: 387 GR 388
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 215/447 (48%), Gaps = 15/447 (3%)
Query: 300 VSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL 359
++++S C SL+ Q AQ I G +T + + + S ++ A +I ++ +
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSV 71
Query: 360 VSWNIMISMFFQENLNETAILTY------LKMRRVGIEPDEFTYGSLLGASDSLQVVEMV 413
+N +IS + + L + L R + P+EFTY SL AS
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 414 HSLLSKIGLMKVEVLN-------SLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGF 466
L L +E +N +L+ Y G++ A +F + L +WNT+++ +
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 467 LTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEI 526
+ E + ++PN G H Y+L++ +
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ 251
Query: 527 SLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQIS 586
+G +L+ +Y+KCG L + VF+ M +RD +NA+I A HG G+E + ++++ IS
Sbjct: 252 FVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL-IS 310
Query: 587 PGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLE 646
G+ PD ATF + +SACSH GLVD+G +IF+ M +YG P V+H+ C+VDLLGRSG LE
Sbjct: 311 QGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLE 370
Query: 647 EAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICA 706
EAE IK N+ + S + HG+ G + + LL + N YVLLSNI A
Sbjct: 371 EAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYA 430
Query: 707 AAGQWEEAANLRDMMREFGTTKQPGCS 733
+W + R++M++ K PG S
Sbjct: 431 GVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 145/357 (40%), Gaps = 60/357 (16%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTES---LKLFTQIHSSHT--LRPDHYTLSTAITASANT 69
I + + N L++++ ++ T++ L+ QI SS + +RP+ +T + AS
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD 125
Query: 70 RPAATATTFGNQLHAHAIRTGLKAHSH---VANSLLSLYAKAEDLASVERAFAEIEYPDD 126
A G LHAH ++ L+ +H V +L+ YA L F I PD
Sbjct: 126 ---AQWHRHGRALHAHVLKF-LEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDL 181
Query: 127 YSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQ 186
+W T+L+A + D+ LF MQ
Sbjct: 182 ATWNTLLAAYANSEEIDS------------------------------DEEVLLLFMRMQ 211
Query: 187 KIGVRPDGYTFTSMLSLCSVELLDFGRHV--HSVVIRSGFLARTSVVNSLITMYFNCGCV 244
VRP+ + +++ C+ L +F R V H V+++ V SLI +Y CGC+
Sbjct: 212 ---VRPNELSLVALIKSCA-NLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCL 267
Query: 245 VDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
A +VF E+ RD YNAMI GL ++ +++ + P ATFV +S
Sbjct: 268 SFARKVFDEMSQ--RDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTIS 325
Query: 305 SCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCF-------GKVNEAQNIFERM 354
+CS G + I A + + Y C G++ EA+ ++M
Sbjct: 326 ACS--HSGLVDEGLQIFNSMKAVYGI-EPKVEHYGCLVDLLGRSGRLEEAEECIKKM 379
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 178/335 (53%), Gaps = 3/335 (0%)
Query: 404 SDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTII 463
+ S+ + + L ++ V ++++ Y R+G I+ A+ +F ++P + + SWN I+
Sbjct: 172 ASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAIL 231
Query: 464 SGFLTNGCPLQGLEQFSALLNTP-LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
+ NG L+ + F ++N P ++PN K +H + R
Sbjct: 232 AACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDL 291
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEA 582
SS++ + N+LV +Y KCG+L+ + VF K+ +WN++I+ +A HG+ +EA+ FE
Sbjct: 292 SSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEE 351
Query: 583 MQI--SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLG 640
M I+PDH TF +L+AC+H GLV G FD+M N +G P ++H+ C++DLLG
Sbjct: 352 MMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLG 411
Query: 641 RSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVL 700
R+G +EA ++ A+ I SL +AC HG+L L + + L+ + NN +
Sbjct: 412 RAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAM 471
Query: 701 LSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
++N+ G WEEA R M++ K PG S I
Sbjct: 472 MANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRI 506
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 126/261 (48%), Gaps = 14/261 (5%)
Query: 53 RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLA 112
RP+H+ + ++ P ++ +H H ++G + V +LL YA +
Sbjct: 123 RPNHFIYPLVLKST----PYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHI 178
Query: 113 SVERA-FAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD 171
++ R F E+ + SWT MLS R G + +A+ LF+ MP R +V WNAI+ C
Sbjct: 179 TLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPER-DVPSWNAILAAC-TQ 236
Query: 172 NGHDDVAFDLFRDM-QKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTS 229
NG A LFR M + +RP+ T +LS C+ L + +H+ R +
Sbjct: 237 NGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVF 296
Query: 230 VVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK 289
V NSL+ +Y CG + +A VF A + +N+MI+ R+E+A +F +M K
Sbjct: 297 VSNSLVDLYGKCGNLEEASSVFK--MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK 354
Query: 290 ACFS---PMEATFVSVMSSCS 307
+ P TF+ ++++C+
Sbjct: 355 LNINDIKPDHITFIGLLNACT 375
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 166/385 (43%), Gaps = 54/385 (14%)
Query: 138 RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNG-HDDVAFDLFRDMQKIGV-RPDGY 195
RL ++ A +FD+ + N ++ A++T + H AF FR M V RP+ +
Sbjct: 69 RLCNLSYARFIFDRF-SFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHF 127
Query: 196 TFTSMLSLCSVELLDFGRH-VHSVVIRSGFLARTSVVNSLITMYFN-CGCVVDAYQVFGE 253
+ +L F VH+ + +SGF V +L+ Y + + A Q+F E
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDE 187
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK-----------AC----------- 291
+ R+ V++ AM+ G R +A +F DM + AC
Sbjct: 188 MSE--RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVS 245
Query: 292 ----------FSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMY 338
P E T V V+S+C+ +L++ A + + + V+N+ + +Y
Sbjct: 246 LFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLY 305
Query: 339 SCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG---IEPDEF 395
G + EA ++F+ ++ L +WN MI+ F +E AI + +M ++ I+PD
Sbjct: 306 GKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHI 365
Query: 396 TYGSLLGASDSLQVVEMVHS----LLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSN 450
T+ LL A +V + ++ G+ ++E LI R GR + AL++ S
Sbjct: 366 TFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMST 425
Query: 451 LPYKSLISWNTIISGFLTNGCPLQG 475
+ K+ + I G L N C + G
Sbjct: 426 MKMKA----DEAIWGSLLNACKIHG 446
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 40/185 (21%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N +LA T++ E++ LF ++ + ++RP+ T+ ++A A T +H
Sbjct: 228 NAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQT----GTLQLAKGIH 283
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
A A R L + V+NSL+ LY K +L F
Sbjct: 284 AFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF------------------------- 318
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG---VRPDGYTFTSM 200
+M ++ ++ WN++I C A +G + A +F +M K+ ++PD TF +
Sbjct: 319 -------KMASKKSLTAWNSMIN-CFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 201 LSLCS 205
L+ C+
Sbjct: 371 LNACT 375
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 176/326 (53%), Gaps = 1/326 (0%)
Query: 411 EMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
E +HS++ + G + V NSL+ Y G + A ++F +P K L++WN++I+GF N
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG 529
G P + L ++ + + +KP+ + GK+VH Y+++ G + +
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
N L+ +YA+CG ++ + +F+ MV ++++SW +LI A +G GKEA+ F+ M+ + G+
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 590 EPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
P TF +L ACSH G+V +G F M Y P ++HF C+VDLL R+G +++A
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 247
Query: 650 RLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAG 709
IK N I +L AC HG+ L +L+ + N+ YVLLSN+ A+
Sbjct: 248 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 307
Query: 710 QWEEAANLRDMMREFGTTKQPGCSWI 735
+W + +R M G K PG S +
Sbjct: 308 RWSDVQKIRKQMLRDGVKKVPGHSLV 333
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 141/292 (48%), Gaps = 18/292 (6%)
Query: 211 FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDG 270
G +HSVVIRSGF + V NSL+ +Y NCG V AY+VF ++ +D V +N++I+G
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNSVING 63
Query: 271 LVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAY 327
+ E+A ++ +M P T VS++S+C+ +L +G + IK G
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 328 TAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
+N + +Y+ G+V EA+ +F+ M +++ VSW +I + AI + M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 388 V-GIEPDEFTYGSLLGASDSLQVV----EMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRI 441
G+ P E T+ +L A +V E + + + ++E ++ R G++
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 442 NWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG---LEQFSALLNTPLKPN 490
A + ++P + N +I L C + G L +F+ + L+PN
Sbjct: 244 KKAYEYIKSMPMQP----NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPN 291
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 16/305 (5%)
Query: 307 SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMI 366
+ +R+G + I++GF + V N+ + +Y+ G V A +F++M E+DLV+WN +I
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 367 SMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGLM 423
+ F + E A+ Y +M GI+PD FT SLL A +L + + VH + K+GL
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 424 K-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL 482
+ + N L+ Y R GR+ A +F + K+ +SW ++I G NG + +E F +
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 483 LNTP-LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR----HGFSSEISLGNALVTMYA 537
+T L P G + Y R + I +V + A
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCMVDLLA 238
Query: 538 KCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATF 596
+ G + + +M ++ + + W L+ A HG A F +QI +EP+H+
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE--FARIQILQ-LEPNHSGD 295
Query: 597 TIVLS 601
++LS
Sbjct: 296 YVLLS 300
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 67/328 (20%)
Query: 78 FGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAST 137
G +H+ IR+G + +V NSLL LYA D+AS
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS------------------------ 41
Query: 138 RLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
A K+FD+MP + VA WN++I A+NG + A L+ +M G++PDG+T
Sbjct: 42 -------AYKVFDKMPEKDLVA-WNSVINGF-AENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 198 TSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA 256
S+LS C+ + L G+ VH +I+ G N L+ +Y CG V +A +F E+
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA-CFSPMEATFVSVMSSCSSLRVGCQA 315
++ V++ ++I GL ++A +F+ M+ P E TFV ++ +CS
Sbjct: 153 --KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS-------- 202
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
+K GF+ F ++ E I R+E + M+ + +
Sbjct: 203 HCGMVKEGFEY--------------FRRMREEYKIEPRIEH-----FGCMVDLLARAGQV 243
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+ A Y ++ + ++P+ + +LLGA
Sbjct: 244 KKA---YEYIKSMPMQPNVVIWRTLLGA 268
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Query: 510 GKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQ 569
G+ +H ++R GF S I + N+L+ +YA CG + + VF+ M ++D ++WN++I+ +A+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 570 HGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSV 629
+G+ +EA+ + M S GI+PD T +LSAC+ +G + G R+ M+ + G ++
Sbjct: 67 NGKPEEALALYTEMN-SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRNL 124
Query: 630 DHFSCIVDLLGRSGYLEEAERL 651
+ ++DL R G +EEA+ L
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTL 146
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 51/244 (20%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + ++ N ++ + + E+L L+T+++S ++PD +T+ + ++A A
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSLLSACAKI----G 103
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A T G ++H + I+ GL + H +N LL LYA+
Sbjct: 104 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC-------------------------- 137
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI-GVRPD 193
G V +A LFD+M ++++V+ W ++I A NG A +LF+ M+ G+ P
Sbjct: 138 -----GRVEEAKTLFDEMVDKNSVS-WTSLIVGL-AVNGFGKEAIELFKYMESTEGLLPC 190
Query: 194 GYTFTSMLSLCSVELLDFGRHVHSVVIRSGF--LARTSVVNSLITMYFNCGCVVDAYQVF 251
TF +L CS H +++ GF R + + GC+VD
Sbjct: 191 EITFVGILYACS----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 252 GEVE 255
G+V+
Sbjct: 241 GQVK 244
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 155/581 (26%), Positives = 262/581 (45%), Gaps = 80/581 (13%)
Query: 232 NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNE-DAFVMFRDMQKA 290
N++I Y V +A ++F E + RD +TYN ++ G + D E +A MF +M +
Sbjct: 58 NAVIAAYVKFNNVKEARELF-ESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRK 116
Query: 291 CFSPM------EATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKV 344
+ T V + + +++ G Q +KTG D ++ + MYS GK
Sbjct: 117 EKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKF 176
Query: 345 NEAQNIF----------------------------------ERMEERDLVSWNIMISMFF 370
E NIF E D +SWN +I+ +
Sbjct: 177 KEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYA 236
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHS------------ 415
Q E A+ + M G++ DE ++G++L SL+ +++ VH+
Sbjct: 237 QNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKF 296
Query: 416 -------LLSKIGLMK-------------VEVLNSLIAAYCRNGRINWALQIFSNLPYKS 455
+ K G MK + +S+I Y G++ A ++F +L K+
Sbjct: 297 VSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKN 356
Query: 456 LISWNTIISGFLTNGCPLQGLEQFSALL-NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVH 514
L+ W + G+L P LE A + N P++ GK++H
Sbjct: 357 LVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIH 416
Query: 515 GYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGK 574
G+ LR G + L A V MY+KCG+++ + +F++ +RDT+ +NA+I+ A HG
Sbjct: 417 GHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEA 476
Query: 575 EAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSC 634
++ FE M G +PD TF +LSAC H GLV +G + F M+ Y P H++C
Sbjct: 477 KSFQHFEDM-TEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTC 535
Query: 635 IVDLLGRSGYLEEAERLIKG-GYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHN 693
++DL G++ L++A L++G ++ I + +AC+ + N L + V LL + +
Sbjct: 536 MIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGS 595
Query: 694 NPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
N S Y+ ++N A++G+W+E +R MR GCSW
Sbjct: 596 NGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSW 636
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 128/568 (22%), Positives = 241/568 (42%), Gaps = 90/568 (15%)
Query: 83 HAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHV 142
H +I++G + +N L++LY+K+ L F E+ + YSW +++A + +V
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 143 GDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDM---QKIGVRPDGYTFTS 199
+A +LF+ ++ +N +++ +G + A ++F +M +K + D +T T+
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 200 MLSLCSVELLD--FGRHVHSVVIRSGFLARTSVVNSLITMYFNCG------------CV- 244
M+ L S +L + +G +H V++++G V+SLI MY CG CV
Sbjct: 131 MVKL-SAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVE 189
Query: 245 ----------VDAYQVFGEVEAG---------LRDHVTYNAMIDGLVRVDRNEDAFVMFR 285
+ AY G+++ L D +++N +I G + E+A M
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAV 249
Query: 286 DMQKACFSPMEATF---VSVMSSCSSLRVGCQAQAQSIKTG-----------FDAYTAVN 331
M++ E +F ++V+SS SL++G + A+ +K G D Y
Sbjct: 250 SMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCG 309
Query: 332 N--------------------ATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQ 371
N + + YS GK+ EA+ +F+ + E++LV W M F
Sbjct: 310 NMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAM----FL 365
Query: 372 ENLNETAILTYLKMRRVGIE-----PDEFTYGSLLGASDSLQVVE-----MVHSLLSKIG 421
LN + L++ R I PD S+LGA +E HSL + I
Sbjct: 366 GYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI- 424
Query: 422 LMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSA 481
LM +++ + + Y + G + +A +IF + + + +N +I+G +G + + F
Sbjct: 425 LMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFED 484
Query: 482 LLNTPLKPNAYXXXXXXXXXXXXXXXXHG-KQVHGYILRHGFSSEISLGNALVTMYAKCG 540
+ KP+ G K I + S E ++ +Y K
Sbjct: 485 MTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAY 544
Query: 541 SLDGSLGVFNAM--VKRDTISWNALISA 566
LD ++ + + V++D + A ++A
Sbjct: 545 RLDKAIELMEGIDQVEKDAVILGAFLNA 572
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 200/438 (45%), Gaps = 48/438 (10%)
Query: 7 SRQMSTTTISSEQILKLNHLLATLTRSNQ-HTESLKLFTQIHSSHT--LRPDHYTLSTAI 63
+R++ + ++ N LL+ +++ +E++++F ++H + D +T++T +
Sbjct: 73 ARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMV 132
Query: 64 TASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAF--AEI 121
SA T +G QLH ++TG +SL+ +Y+K V F + +
Sbjct: 133 KLSAKL----TNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCV 188
Query: 122 EYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDL 181
E+ D + M++A R G + AL +F + P ++ WN +I A NG+++ A +
Sbjct: 189 EFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGY-AQNGYEEEALKM 247
Query: 182 FRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFN 240
M++ G++ D ++F ++L+ L S++ L G+ VH+ V+++G + V + ++ +Y
Sbjct: 248 AVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCK 307
Query: 241 C-------------------------------GCVVDAYQVFGEVEAGLRDHVTYNAMID 269
C G +V+A ++F + ++ V + AM
Sbjct: 308 CGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSE--KNLVVWTAMFL 365
Query: 270 GLVRVDRNEDAFVMFRD-MQKACFSPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFD 325
G + + + + + R + +P VSV+ +CS + G + S++TG
Sbjct: 366 GYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGIL 425
Query: 326 AYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKM 385
+ A + MYS G V A+ IF+ ERD V +N MI+ + + M
Sbjct: 426 MDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM 485
Query: 386 RRVGIEPDEFTYGSLLGA 403
G +PDE T+ +LL A
Sbjct: 486 TEGGFKPDEITFMALLSA 503
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 161/350 (46%), Gaps = 20/350 (5%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N L+A ++ E+LK+ + + L+ D ++ + N + + G ++H
Sbjct: 229 NTLIAGYAQNGYEEEALKMAVSMEEN-GLKWDEHSFGAVL----NVLSSLKSLKIGKEVH 283
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
A ++ G ++ V++ ++ +Y K ++ E A + + YS ++M+ + G +
Sbjct: 284 ARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMV 343
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADN-GHDDVAFDLFRD-MQKIGVRPDGYTFTSML 201
+A +LFD + + N+ VW A+ G N D +L R + PD S+L
Sbjct: 344 EAKRLFDSLSEK-NLVVWTAMF--LGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVL 400
Query: 202 SLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRD 260
CS++ ++ G+ +H +R+G L +V + + MY CG V A ++F + RD
Sbjct: 401 GACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS--SFERD 458
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSI 320
V YNAMI G +F F DM + F P E TF++++S+C + + + +
Sbjct: 459 TVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGE-KYF 517
Query: 321 KTGFDAYTAVNNATMTMYSC----FGKVNEAQNIFERMEERDLVSWNIMI 366
K+ +AY + Y+C +GK E ME D V + +I
Sbjct: 518 KSMIEAYNI--SPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVI 565
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 57/270 (21%)
Query: 398 GSLLGASDSLQVVEMVHSLLSKIGLMK-------------VEVLNSLIAAYCRNGRINWA 444
GS L A S Q+V +L SK GL++ V N++IAAY + + A
Sbjct: 18 GSTLTAVSSNQLV----NLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEA 73
Query: 445 LQIF-SNLPYKSLISWNTIISGFL-TNGCPLQGLEQFSALLNTPLKP---NAYXXXXXXX 499
++F S+ + LI++NT++SGF T+GC + +E F + + +
Sbjct: 74 RELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVK 133
Query: 500 XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVF---------- 549
+G+Q+HG +++ G ++L+ MY+KCG +F
Sbjct: 134 LSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDS 193
Query: 550 ---NAMVK---------------------RDTISWNALISAYAQHGQGKEAVCCFEAMQI 585
NAM+ DTISWN LI+ YAQ+G +EA+ +M+
Sbjct: 194 VARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME- 252
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
G++ D +F VL+ S + + G +
Sbjct: 253 ENGLKWDEHSFGAVLNVLSSLKSLKIGKEV 282
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 228/467 (48%), Gaps = 43/467 (9%)
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMF 369
+ G + A IKTGF ++ + ++ G ++ A+ +F+ + + L ++N MIS +
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 370 FQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL--------QVVEMVHSLLSKIG 421
+ L + +L +M G + D +T +L AS+S + +VH+ + K
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 422 LMKVEVL--------------------------------NSLIAAYCRNGRINWALQIFS 449
+ +VL S+I+ Y G + A +IF+
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 450 NLPYKSLISWNTIISGFLTNG-CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXX 508
K ++ +N ++ GF +G + ++ + ++ PN
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 509 HGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYA 568
G+QVH I++ G + I +G++L+ MYAKCG ++ + VF+ M +++ SW ++I Y
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 569 QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPS 628
++G +EA+ F M+ IEP++ TF LSACSH GLVD G IF+ M Y P
Sbjct: 351 KNGNPEEALELFTRMK-EFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 629 VDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLL 688
++H++CIVDL+GR+G L +A + +S+I +L S+C HGN+ L + A L
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Query: 689 EKDHNN-PSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
+ + + P Y+ LSN+ A+ +W+ + +R++M+ +K G SW
Sbjct: 470 KLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 219/471 (46%), Gaps = 49/471 (10%)
Query: 51 TLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAED 110
+L P Y ++ A+ N+ PA A G ++HA I+TG + +++ LL L+ K
Sbjct: 30 SLSPAKY-IAGALQEHINS-PAPKA---GKKIHADIIKTGFQPDLNISIKLLILHLKCGC 84
Query: 111 LASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGA 170
L+ + F E+ P ++ M+S + G V + L L +M A + A
Sbjct: 85 LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKA 144
Query: 171 DNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLD-FGRHVHSVVIRSGFL--AR 227
N L R + ++ + + C VEL D + ++SG L AR
Sbjct: 145 SNSRGSTMI-LPRSLCRL--------VHARIIKCDVELDDVLITALVDTYVKSGKLESAR 195
Query: 228 T--------SVV--NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRN 277
T +VV S+I+ Y N G V DA ++F + ++D V YNAM++G R
Sbjct: 196 TVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK--VKDIVVYNAMVEGFSRSGET 253
Query: 278 EDAFV-MFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNA 333
V M+ MQ+A F P +TF SV+ +CS L VG Q AQ +K+G + + ++
Sbjct: 254 AKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSS 313
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
+ MY+ G +N+A+ +F++M+E+++ SW MI + + E A+ + +M+ IEP+
Sbjct: 314 LLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPN 373
Query: 394 EFTY-GSLLGASDSLQV---VEMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIF 448
T+ G+L S S V E+ S+ + K+E ++ R G +N A +
Sbjct: 374 YVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFA 433
Query: 449 SNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL-------LNTPLKPNAY 492
+P + ++ I L + C L G + +++ LN +P AY
Sbjct: 434 RAMPERP----DSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAY 480
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 160/346 (46%), Gaps = 28/346 (8%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT--ATTFGNQLHAHAIRTGLKAHS 95
+ L L Q S + D YTLS + AS N+R + + +HA I+ ++
Sbjct: 117 KELLLLVQRMSYSGEKADGYTLSMVLKAS-NSRGSTMILPRSLCRLVHARIIKCDVELDD 175
Query: 96 HVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNR 155
+ +L+ Y K+ L S F ++ + T+M+S G V DA ++F+ +
Sbjct: 176 VLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK 235
Query: 156 SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSV-ELLDFGRH 214
++ V+NA++ + D++ MQ+ G P+ TF S++ CSV + G+
Sbjct: 236 -DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQ 294
Query: 215 VHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRV 274
VH+ +++SG + +SL+ MY CG + DA +VF +++ ++ ++ +MIDG +
Sbjct: 295 VHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQE--KNVFSWTSMIDGYGKN 352
Query: 275 DRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVN--- 331
E+A +F M++ P TF+ +S+CS + + G++ + ++
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACS--------HSGLVDKGYEIFESMQRDY 404
Query: 332 --NATMTMYSCF-------GKVNEAQNIFERMEER-DLVSWNIMIS 367
M Y+C G +N+A M ER D W ++S
Sbjct: 405 SMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLS 450
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTE-SLKLFTQIHSSHTLRPDHYTLSTAITASANTRPA 72
T + I+ N ++ +RS + + S+ ++ + + P+ T ++ I A +
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRA-GFHPNISTFASVIGACS----V 285
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
T+ G Q+HA +++G+ H + +SLL +YAK + R F +++ + +SWT+M
Sbjct: 286 LTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSM 345
Query: 133 LSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK 187
+ + G+ +AL+LF +M N + ++ C + +G D +++F MQ+
Sbjct: 346 IDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSAC-SHSGLVDKGYEIFESMQR 402
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 242/491 (49%), Gaps = 15/491 (3%)
Query: 127 YSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQ 186
Y ++S+ RLG + A K+FD MP + N W A+I G +D AF LF D
Sbjct: 118 YFGNNLISSCVRLGDLVYARKVFDSMPEK-NTVTWTAMIDGY-LKYGLEDEAFALFEDYV 175
Query: 187 KIGVR-PDGYTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCV 244
K G+R + F +L+LCS + GR VH +++ G + V +SL+ Y CG +
Sbjct: 176 KHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGEL 234
Query: 245 VDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
A + F +E +D +++ A+I R A MF M F P E T S++
Sbjct: 235 TSALRAFDMMEE--KDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILK 292
Query: 305 SCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS 361
+CS +LR G Q + +K V + M MY+ G++++ + +F+ M R+ V+
Sbjct: 293 ACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVT 352
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVVEMVHSLLS 418
W +I+ +E E AI + M+R + + T S+L G+ +L + + +H+ +
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII 412
Query: 419 KIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLE 477
K + K V + ++L+ YC+ G A + LP + ++SW +ISG + G + L+
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 478 QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYA 537
++ ++PN + G+ +H ++ S + +G+AL+ MYA
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYA 532
Query: 538 KCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFT 597
KCG + + VF++M +++ +SW A+I YA++G +EA+ M+ + G E D F
Sbjct: 533 KCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRME-AEGFEVDDYIFA 591
Query: 598 IVLSACSHVGL 608
+LS C + L
Sbjct: 592 TILSTCGDIEL 602
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 184/405 (45%), Gaps = 44/405 (10%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ + ++ +++ +R +++ +F + + H P+ +T+ + + A + +
Sbjct: 244 MEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN-HWFLPNEFTVCSILKACSEEK---- 298
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
A FG Q+H+ ++ +K V SL+ +YAK
Sbjct: 299 ALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC-------------------------- 332
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
G + D K+FD M NR N W +II A G + A LFR M++ + +
Sbjct: 333 -----GEISDCRKVFDGMSNR-NTVTWTSIIA-AHAREGFGEEAISLFRIMKRRHLIANN 385
Query: 195 YTFTSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
T S+L C SV L G+ +H+ +I++ + ++L+ +Y CG DA+ V +
Sbjct: 386 LTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQ 445
Query: 254 VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS---SLR 310
+ + RD V++ AMI G + +A ++M + P T+ S + +C+ SL
Sbjct: 446 LPS--RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLL 503
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFF 370
+G + + K + V +A + MY+ G V+EA +F+ M E++LVSW MI +
Sbjct: 504 IGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYA 563
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHS 415
+ A+ +M G E D++ + ++L +++ E V S
Sbjct: 564 RNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDEAVES 608
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 201/461 (43%), Gaps = 43/461 (9%)
Query: 303 MSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSW 362
+ S + +R+ + A ++K D N ++ G + A+ +F+ M E++ V+W
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTW 151
Query: 363 NIMISMFFQENLNETAILTYLKMRRVGIE-PDEFTYGSLLGASDSLQVVEM---VHSLLS 418
MI + + L + A + + GI +E + LL E+ VH +
Sbjct: 152 TAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMV 211
Query: 419 KIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQ 478
K+G+ + V +SL+ Y + G + AL+ F + K +ISW +IS G ++ +
Sbjct: 212 KVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGM 271
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK 538
F +LN PN + G+QVH +++ +++ +G +L+ MYAK
Sbjct: 272 FIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAK 331
Query: 539 CGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTI 598
CG + VF+ M R+T++W ++I+A+A+ G G+EA+ F M+ I ++ T
Sbjct: 332 CGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI-ANNLTVVS 390
Query: 599 VLSACSHVGLVDDGTRIFDMMV----------------------------NIYGFVPSVD 630
+L AC VG + G + ++ N+ +PS D
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRD 450
Query: 631 HFSCIVDLLGRSGYLEEAERL------IKGGYFGANSNICWSLFSACAAHGNLRLGRMVA 684
S + G S E+E L I+ G N S ACA +L +GR +
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQEG-VEPNPFTYSSALKACANSESLLIGRSIH 509
Query: 685 RLLLEKDHNNPSVYV--LLSNICAAAGQWEEAANLRDMMRE 723
+ +K+H +V+V L ++ A G EA + D M E
Sbjct: 510 S-IAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 192/401 (47%), Gaps = 10/401 (2%)
Query: 344 VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEP-----DEFTYG 398
+N + +F + L N MI F + +RR P F
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 399 SLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS 458
+ + D L +++ + S L ++ +L+ Y A ++F +P + +S
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVS 181
Query: 459 WNTIISGFLTNGCPLQGLEQFSALLNTP---LKPNAYXXXXXXXXXXXXXXXXHGKQVHG 515
WN + S +L N L F + N +KP+ GKQVH
Sbjct: 182 WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD 241
Query: 516 YILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKE 575
+I +G S ++L N LV+MY++CGS+D + VF M +R+ +SW ALIS A +G GKE
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 576 AVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVN-IYGFVPSVDHFSC 634
A+ F M + GI P+ T T +LSACSH GLV +G FD M + + P++ H+ C
Sbjct: 302 AIEAFNEM-LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGC 360
Query: 635 IVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNN 694
+VDLLGR+ L++A LIK +S I +L AC HG++ LG V L+E
Sbjct: 361 VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEE 420
Query: 695 PSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
YVLL N + G+WE+ LR +M+E +PGCS I
Sbjct: 421 AGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAI 461
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 10/234 (4%)
Query: 178 AFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLI 235
F LFR +++ P +S C ++ D G +H + GFL+ + ++ +L+
Sbjct: 96 GFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLM 155
Query: 236 TMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK---ACF 292
+Y C DA +VF E+ RD V++N + +R R D V+F M+ C
Sbjct: 156 DLYSTCENSTDACKVFDEIPK--RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCV 213
Query: 293 SPMEATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQN 349
P T + + +C+ +L G Q + G ++N ++MYS G +++A
Sbjct: 214 KPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQ 273
Query: 350 IFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+F M ER++VSW +IS + AI + +M + GI P+E T LL A
Sbjct: 274 VFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 163/412 (39%), Gaps = 82/412 (19%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++ + S E +LF + + +L + + S A+ + G Q+H
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLG----GLQIH 136
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
G + S + +L+ LY+ E+ + F EI D SW + S R
Sbjct: 137 GKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTR 196
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
D L LFD+M N + C V+PDG T L
Sbjct: 197 DVLVLFDKMKND---------VDGC---------------------VKPDGVTCLLALQA 226
Query: 204 CS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH- 261
C+ + LDFG+ VH + +G ++ N+L++MY CG + AYQVF G+R+
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVF----YGMRERN 282
Query: 262 -VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSI 320
V++ A+I GL ++A F +M K SP E T ++S+CS
Sbjct: 283 VVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSH------------ 330
Query: 321 KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME------ERDLVSWNIMISMFFQENL 374
G V E F+RM + +L + ++ + + L
Sbjct: 331 --------------------SGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE 426
+ A Y ++ + ++PD + +LLGA VE+ ++S + +K E
Sbjct: 371 LDKA---YSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAE 419
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 52/237 (21%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSS--HTLRPDHYTLSTAITASANTRPA 72
I + N L + R+ + + L LF ++ + ++PD T A+ A AN
Sbjct: 174 IPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANL--- 230
Query: 73 ATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTM 132
A FG Q+H GL +++N+L+S+Y+
Sbjct: 231 -GALDFGKQVHDFIDENGLSGALNLSNTLVSMYS-------------------------- 263
Query: 133 LSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRP 192
R G + A ++F M R+ V W A+I+ A NG A + F +M K G+ P
Sbjct: 264 -----RCGSMDKAYQVFYGMRERN-VVSWTALISGL-AMNGFGKEAIEAFNEMLKFGISP 316
Query: 193 DGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNC---GCVVD 246
+ T T +LS CS HS ++ G + + + + N GCVVD
Sbjct: 317 EEQTLTGLLSACS----------HSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVD 363
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 184/351 (52%), Gaps = 3/351 (0%)
Query: 387 RVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQ 446
R G E D F +L+ A L + + ++ V V N++I Y R G + A++
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 447 IFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSAL-LNTPLKPNAYXXXXXXXXXXXXX 505
+F ++P K++ SW T+ISGF NG + L+ F + + +KPN
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 506 XXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALI 564
G+++ GY +GF I + NA + MY+KCG +D + +F + +R+ SWN++I
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 565 SAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYG 624
+ A HG+ EA+ F M + G +PD TF +L AC H G+V G +F M ++
Sbjct: 290 GSLATHGKHDEALTLFAQM-LREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHK 348
Query: 625 FVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVA 684
P ++H+ C++DLLGR G L+EA LIK ++ + +L AC+ HGN+ + + +
Sbjct: 349 ISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIAS 408
Query: 685 RLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
L + + NP V++SNI AA +W+ +R +M++ TK G S+
Sbjct: 409 EALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYF 459
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 165/356 (46%), Gaps = 27/356 (7%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYT---LSTAITASANTRPAATATTFGN 80
N L+ +Q ES+ L+ + S LRP H+T + A + ++ RP
Sbjct: 51 NKLIQAYYVHHQPHESIVLYNLL-SFDGLRPSHHTFNFIFAASASFSSARPLRL------ 103
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
LH+ R+G ++ S +L++ YAK L R F E+ D W M++ R G
Sbjct: 104 -LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRG 162
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK-IGVRPDGYTFTS 199
+ A++LFD MP R NV W +I+ + NG+ A +F M+K V+P+ T S
Sbjct: 163 DMKAAMELFDSMP-RKNVTSWTTVISGF-SQNGNYSEALKMFLCMEKDKSVKPNHITVVS 220
Query: 200 MLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL 258
+L C+ + L+ GR + +GF V N+ I MY CG + A ++F E+
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL-GNQ 279
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQ 318
R+ ++N+MI L ++++A +F M + P TFV ++ +C + G + Q
Sbjct: 280 RNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC--VHGGMVVKGQ 337
Query: 319 SIKTGFDAYTAVNNATMTMYSCF-------GKVNEAQNIFERMEER-DLVSWNIMI 366
+ + + + + Y C GK+ EA ++ + M + D V W ++
Sbjct: 338 ELFKSMEEVHKI-SPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLL 392
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 160/379 (42%), Gaps = 62/379 (16%)
Query: 145 ALKLFDQMPNRSNVAVWNAIITRCGADN-GHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL 203
A KLFD N S ++N +I + H+ + L+ + G+RP +TF + +
Sbjct: 35 ARKLFDHHQN-SCTFLYNKLIQAYYVHHQPHESIV--LYNLLSFDGLRPSHHTFNFIFAA 91
Query: 204 CSVELLDFG-RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
+ R +HS RSGF + + +LIT Y G + A +VF E+ RD
Sbjct: 92 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK--RDVP 149
Query: 263 TYNAMIDGLVR-------------VDRNE------------------DAFVMFRDMQK-A 290
+NAMI G R + R +A MF M+K
Sbjct: 150 VWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDK 209
Query: 291 CFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
P T VSV+ +C++L +G + + + + GF V NAT+ MYS G ++ A
Sbjct: 210 SVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 348 QNIFERM-EERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTY--------- 397
+ +FE + +R+L SWN MI ++ A+ + +M R G +PD T+
Sbjct: 270 KRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVH 329
Query: 398 -GSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL 456
G ++ + + +E VH + K+ E +I R G++ A + +P K
Sbjct: 330 GGMVVKGQELFKSMEEVHKISPKL-----EHYGCMIDLLGRVGKLQEAYDLIKTMPMKP- 383
Query: 457 ISWNTIISGFLTNGCPLQG 475
+ ++ G L C G
Sbjct: 384 ---DAVVWGTLLGACSFHG 399
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 191/382 (50%), Gaps = 7/382 (1%)
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLS 418
WN ++ + + AI YL M R + PD ++ ++ A+ + + +HS+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 419 KIGLMKVEVLNS-LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLE 477
++G + E S I YC+ G A ++F P + L SWN II G G + +E
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 478 QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF--SSEISLGNALVTM 535
F + + L+P+ + Q+H +L+ S+I + N+L+ M
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 536 YAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHAT 595
Y KCG +D + +F M +R+ +SW+++I YA +G EA+ CF M+ G+ P+ T
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR-EFGVRPNKIT 323
Query: 596 FTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGG 655
F VLSAC H GLV++G F MM + + P + H+ CIVDLL R G L+EA+++++
Sbjct: 324 FVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 656 YFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAA 715
N + L C G++ + VA ++E + N VYV+L+N+ A G W++
Sbjct: 384 PMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVE 443
Query: 716 NLRDMMREFGTTKQPGCSWIGT 737
+R +M+ K P S+ T
Sbjct: 444 RVRKLMKTKKVAKIPAYSYAST 465
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 166/362 (45%), Gaps = 35/362 (9%)
Query: 131 TMLSASTRLGHV----GDALK--LFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRD 184
T+LS T L V GD + + DQ P +WN I+ D A ++
Sbjct: 52 TLLSNCTSLARVRRIHGDIFRSRILDQYPI---AFLWNNIMRSYIRHESPLD-AIQVYLG 107
Query: 185 MQKIGVRPDGYTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCG 242
M + V PD Y+ ++ +V++ DF G+ +HSV +R GF+ + IT+Y G
Sbjct: 108 MVRSTVLPDRYSLPIVIK-AAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAG 166
Query: 243 CVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSV 302
+A +VF E R ++NA+I GL R +A MF DM+++ P + T VSV
Sbjct: 167 EFENARKVFDENPE--RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSV 224
Query: 303 MSSCS-----SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER 357
+SC SL KT + + N+ + MY G+++ A +IFE M +R
Sbjct: 225 TASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQR 284
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLL 417
++VSW+ MI + A+ + +MR G+ P++ T+ +L A +VE +
Sbjct: 285 NVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYF 344
Query: 418 SKIGLMKVEV--------LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
+ +MK E ++ R+G++ A ++ +P K N ++ G L
Sbjct: 345 A---MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKP----NVMVWGCLMG 397
Query: 470 GC 471
GC
Sbjct: 398 GC 399
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 156/355 (43%), Gaps = 18/355 (5%)
Query: 234 LITMYFNCGCVVDAYQVFGEV-EAGLRDHVT----YNAMIDGLVRVDRNEDAFVMFRDMQ 288
L T+ NC + ++ G++ + + D +N ++ +R + DA ++ M
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 289 KACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVN 345
++ P + V+ + + +G + + +++ GF + +T+Y G+
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFE 169
Query: 346 EAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASD 405
A+ +F+ ER L SWN +I A+ ++ M+R G+EPD+FT S+ +
Sbjct: 170 NARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCG 229
Query: 406 SLQVVEMVHSLLSKIGLMKVE------VLNSLIAAYCRNGRINWALQIFSNLPYKSLISW 459
L + + L + K E +LNSLI Y + GR++ A IF + ++++SW
Sbjct: 230 GLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSW 289
Query: 460 NTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR 519
+++I G+ NG L+ LE F + ++PN GK +++
Sbjct: 290 SSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFA-MMK 348
Query: 520 HGFSSEISLGN--ALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHG 571
F E L + +V + ++ G L + V M +K + + W L+ + G
Sbjct: 349 SEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 173/381 (45%), Gaps = 58/381 (15%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N+++ + R ++++++ + S T+ PD Y+L I A+ T G +LH
Sbjct: 86 NNIMRSYIRHESPLDAIQVYLGMVRS-TVLPDRYSLPIVIKAAVQIHD----FTLGKELH 140
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+ A+R G + ++LY KA G
Sbjct: 141 SVAVRLGFVGDEFCESGFITLYCKA-------------------------------GEFE 169
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADN--GHDDVAFDLFRDMQKIGVRPDGYTFTSML 201
+A K+FD+ P R + WNAII G N G + A ++F DM++ G+ PD +T S+
Sbjct: 170 NARKVFDENPER-KLGSWNAII---GGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVT 225
Query: 202 SLC-SVELLDFGRHVHSVVIRSGFLARTSV--VNSLITMYFNCGCVVDAYQVFGEVEAGL 258
+ C + L +H V+++ ++ + +NSLI MY CG + A +F E+
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQ-- 283
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQ 318
R+ V++++MI G +A FR M++ P + TFV V+S+C + G + +
Sbjct: 284 RNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSAC--VHGGLVEEGK 341
Query: 319 S----IKTGFDAYTAVNN--ATMTMYSCFGKVNEAQNIFERMEER-DLVSWNIMISMFFQ 371
+ +K+ F+ +++ + + S G++ EA+ + E M + +++ W + M
Sbjct: 342 TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCL--MGGC 399
Query: 372 ENLNETAILTYLKMRRVGIEP 392
E + + ++ V +EP
Sbjct: 400 EKFGDVEMAEWVAPYMVELEP 420
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 205/425 (48%), Gaps = 36/425 (8%)
Query: 347 AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS 406
A +F ++ +++ +N MI + ++ + M+ GI DE+TY LL + S
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 407 LQVV--------EMVHSLLSKIGLMKVEVL---------------------------NSL 431
L + E++ + ++G +++ V+ N +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 432 IAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
I +C +G + L +F + +S++SWN++IS G + LE F +++ P+
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 492 YXXXXXXXXXXXXXXXXHGKQVHGYILRHG-FSSEISLGNALVTMYAKCGSLDGSLGVFN 550
GK +H G F I++GNALV Y K G L+ + +F
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 551 AMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVD 610
M +R+ +SWN LIS A +G+G+ + F+AM + P+ ATF VL+ CS+ G V+
Sbjct: 295 KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354
Query: 611 DGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSA 670
G +F +M+ + +H+ +VDL+ RSG + EA + +K AN+ + SL SA
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 671 CAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQP 730
C +HG+++L + A L++ + N YVLLSN+ A G+W++ +R +M++ K
Sbjct: 415 CRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKST 474
Query: 731 GCSWI 735
G S I
Sbjct: 475 GQSTI 479
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 190/455 (41%), Gaps = 86/455 (18%)
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
++HAH +R L + + +S+ + R F+ I+ P+
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPN--------------- 66
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSM 200
V V+NA+I +C + G + F M+ G+ D YT+ +
Sbjct: 67 -----------------VLVFNAMI-KCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPL 108
Query: 201 LSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF-------- 251
L C S+ L FG+ VH +IR+GF + ++ +Y + G + DA +VF
Sbjct: 109 LKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNV 168
Query: 252 -------------GEVEAGL--------RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
G+VE GL R V++N+MI L + R+ +A +F +M
Sbjct: 169 VVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQ 228
Query: 291 CFSPMEATFVSVMSSCSSLRV---GCQAQAQSIKTG-FDAYTAVNNATMTMYSCFGKVNE 346
F P EAT V+V+ +SL V G + + +G F + V NA + Y G +
Sbjct: 229 GFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEA 288
Query: 347 AQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG-IEPDEFTYGSLLGASD 405
A IF +M+ R++VSWN +IS E I + M G + P+E T+ +L
Sbjct: 289 ATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCS 348
Query: 406 SLQVVEMVHSLLSKIGLM--------KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLI 457
VE L GLM + E +++ R+GRI A + N+P +
Sbjct: 349 YTGQVERGEELF---GLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMP----V 401
Query: 458 SWNTIISGFLTNGCPLQG---LEQFSALLNTPLKP 489
+ N + G L + C G L + +A+ ++P
Sbjct: 402 NANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEP 436
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 183/424 (43%), Gaps = 27/424 (6%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I + +L N ++ + ESL F+ + S + D YT + + + + + +
Sbjct: 62 IQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM-KSRGIWADEYTYAPLLKSCS----SLS 116
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
FG +H IRTG + ++ LY + ++ F E+ + W M+
Sbjct: 117 DLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIR 176
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
G V L LF QM RS V+ WN++I+ + G D A +LF +M G PD
Sbjct: 177 GFCDSGDVERGLHLFKQMSERSIVS-WNSMISSL-SKCGRDREALELFCEMIDQGFDPDE 234
Query: 195 YTFTSMLSL-CSVELLDFGRHVHSVVIRSG-FLARTSVVNSLITMYFNCGCVVDAYQVFG 252
T ++L + S+ +LD G+ +HS SG F +V N+L+ Y G + A +F
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSLRV 311
+++ R+ V++N +I G + E +F M ++ +P EATF+ V++ CS
Sbjct: 295 KMQR--RNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSY--T 350
Query: 312 GCQAQAQSI------KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME-ERDLVSWNI 364
G + + + + +A T A + + S G++ EA + M + W
Sbjct: 351 GQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGS 410
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEP----DEFTYGSLLGASDSLQVVEMVHSLLSKI 420
++S + + + M V IEP + +L Q VE V +L+ K
Sbjct: 411 LLSAC--RSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKN 468
Query: 421 GLMK 424
L K
Sbjct: 469 RLRK 472
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 136/316 (43%), Gaps = 37/316 (11%)
Query: 442 NWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXX 501
++A ++FS++ +++ +N +I + G PL+ L FS++ + + + Y
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 502 XXXXXXXHGKQVHGYILRHGFS--SEISLG-----------------------------N 530
GK VHG ++R GF +I +G N
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWN 172
Query: 531 ALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIE 590
++ + G ++ L +F M +R +SWN++IS+ ++ G+ +EA+ F M I G +
Sbjct: 173 LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM-IDQGFD 231
Query: 591 PDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAER 650
PD AT VL + +G++D G I + F + + +VD +SG LE A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 651 LIKGGYFGANSNICW-SLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNI--CAA 707
+ + + + W +L S A +G G + ++E+ P+ L + C+
Sbjct: 292 IFR--KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSY 349
Query: 708 AGQWEEAANLRDMMRE 723
GQ E L +M E
Sbjct: 350 TGQVERGEELFGLMME 365
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 207/427 (48%), Gaps = 38/427 (8%)
Query: 344 VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG--IEPDEFTYGSLL 401
++ A I +R E+ L + N MI + + E + Y ++ G ++PD +T L+
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 402 GASDSLQVVE---MVH-------------------SLLSKIGLMKV--EVLNS------- 430
A L++ E VH SL +++G + +V NS
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 431 ----LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
++ A R G + +A ++F +P + I+WN +ISG+ G + L F +
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSL 546
+K N G+ H YI R+ + L LV +YAKCG ++ ++
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 547 GVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
VF M +++ +W++ ++ A +G G++ + F M+ G+ P+ TF VL CS V
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMK-QDGVTPNAVTFVSVLRGCSVV 354
Query: 607 GLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWS 666
G VD+G R FD M N +G P ++H+ C+VDL R+G LE+A +I+ ++ + S
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 667 LFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGT 726
L A + NL LG + ++ +LE + N YVLLSNI A + W+ +++R M+ G
Sbjct: 415 LLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
Query: 727 TKQPGCS 733
KQPGCS
Sbjct: 475 RKQPGCS 481
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 168/341 (49%), Gaps = 14/341 (4%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHSS-HTLRPDHYTLSTAITASANTRPAATATTF 78
+ LN ++ +S +S + +I SS + L+PD+YT++ + A R T
Sbjct: 71 LFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET---- 126
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTR 138
G Q+H IR G HV L+SLYA+ L S + F I PD T M++A R
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
G V A KLF+ MP R +A WNA+I+ A G A ++F MQ GV+ +G
Sbjct: 187 CGDVVFARKLFEGMPERDPIA-WNAMISGY-AQVGESREALNVFHLMQLEGVKVNGVAMI 244
Query: 199 SMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
S+LS C+ + LD GR HS + R+ + +L+ +Y CG + A +VF +E
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE- 303
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQA 317
++ T+++ ++GL E +F M++ +P TFVSV+ CS + + Q
Sbjct: 304 -KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR 362
Query: 318 Q--SIKTGFDAYTAVNN--ATMTMYSCFGKVNEAQNIFERM 354
S++ F + + + +Y+ G++ +A +I ++M
Sbjct: 363 HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 148/345 (42%), Gaps = 44/345 (12%)
Query: 265 NAMIDGLVRVDRNEDAFVMFRDMQKAC--FSPMEATFVSVMSSCSSLRV---GCQAQAQS 319
N+MI + E +F +R + + P T ++ +C+ LR+ G Q +
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 320 IKTGFDAYTAVNNATMTMY-------SCF------------------------GKVNEAQ 348
I+ GFD V +++Y SC G V A+
Sbjct: 135 IRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 349 NIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ 408
+FE M ERD ++WN MIS + Q + A+ + M+ G++ + S+L A L
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 409 VVEM---VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIIS 464
++ HS + + + + V + +L+ Y + G + A+++F + K++ +W++ ++
Sbjct: 255 ALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 465 GFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSS 524
G NG + LE FS + + PNA G Q H +R+ F
Sbjct: 315 GLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGI 373
Query: 525 EISLGN--ALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISA 566
E L + LV +YA+ G L+ ++ + M +K W++L+ A
Sbjct: 374 EPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 171/350 (48%), Gaps = 7/350 (2%)
Query: 390 IEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLMKVEVLN-SLIAAYCRNGRINWAL 445
+EP+ TY LL + + +H+ + +G E L L+ Y +G + A
Sbjct: 106 VEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 163
Query: 446 QIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXX 505
+F +L + LI WN +ISG++ G +GL + + + P+ Y
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 506 XXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALIS 565
HGK+ H +++ S I + +ALV MY KC S VF+ + R+ I+W +LIS
Sbjct: 224 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 283
Query: 566 AYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGF 625
Y HG+ E + CFE M+ G P+ TF +VL+AC+H GLVD G F M YG
Sbjct: 284 GYGYHGKVSEVLKCFEKMK-EEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGI 342
Query: 626 VPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVAR 685
P H++ +VD LGR+G L+EA + + + SL AC HGN++L + A
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAAT 402
Query: 686 LLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
LE D N YV+ +N A+ G E A+ +R M G K PG S I
Sbjct: 403 KFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQI 452
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 145/335 (43%), Gaps = 15/335 (4%)
Query: 298 TFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM 354
T+ ++ C + G + AQ GF + + +Y+ G + A +F +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 355 EERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE--- 411
+ RDL+ WN MIS + Q+ L + + Y MR+ I PD++T+ S+ A +L +E
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 412 MVHSLLSKIGLMKVEVLNS-LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNG 470
H+++ K + +++S L+ Y + + ++F L +++I+W ++ISG+ +G
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 471 CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR--HGFSSEISL 528
+ L+ F + +PN G + H Y ++ +G E
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQH 348
Query: 529 GNALVTMYAKCGSLDGSLG-VFNAMVKRDTISWNALISAYAQHGQGK-EAVCCFEAMQIS 586
A+V + G L + V + K W +L+ A HG K + + +++
Sbjct: 349 YAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELD 408
Query: 587 PGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVN 621
P ++ F ++C GL + +++ M N
Sbjct: 409 PTNGGNYVVFANGYASC---GLREAASKVRRKMEN 440
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 77 TFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
T G ++HA G + ++ LL LYA + DL +
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA---------------------- 162
Query: 137 TRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYT 196
G + +LK+ D +P WNA+I+ G + ++ DM++ + PD YT
Sbjct: 163 ---GILFRSLKIRDLIP-------WNAMISGY-VQKGLEQEGLFIYYDMRQNRIVPDQYT 211
Query: 197 FTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
F S+ CS ++ L+ G+ H+V+I+ + V ++L+ MYF C D ++VF ++
Sbjct: 212 FASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLS 271
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
R+ +T+ ++I G + + F M++ P TF+ V+++C+
Sbjct: 272 T--RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACN 321
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 134/296 (45%), Gaps = 15/296 (5%)
Query: 189 GVRPDGYTFTSMLSLCSV-ELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA 247
G++ + T+ +L C + G+ +H+ + GF + L+ +Y G + A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 248 YQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
+F ++ +RD + +NAMI G V+ ++ ++ DM++ P + TF SV +CS
Sbjct: 163 GILFRSLK--IRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 308 SL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNI 364
+L G +A A IK + V++A + MY ++ +F+++ R++++W
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV----EMVHSLLSKI 420
+IS + + + KM+ G P+ T+ +L A + +V E +S+
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY 340
Query: 421 GLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
G+ + + +++ R GR+ A + P K + + G L C + G
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKE----HPPVWGSLLGACRIHG 392
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAA 73
++ ++ N +++ + E L ++ + + + PD YT ++ A + A
Sbjct: 168 SLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV-PDQYTFASVFRACS----AL 222
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
G + HA I+ +K++ V ++L+ +Y K + R F ++ + +WT+++
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 134 SASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK-IG 189
S G V + LK F++M R N + ++T C G D ++ F M++ G
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACN-HGGLVDKGWEHFYSMKRDYG 341
Query: 190 VRPDGYTFTSML 201
+ P+G + +M+
Sbjct: 342 IEPEGQHYAAMV 353
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 224/483 (46%), Gaps = 40/483 (8%)
Query: 288 QKACFSPMEATFVSVMSSCSSLRV--GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVN 345
++ + P + +C RV G ++SIK G + V ++ ++MY G V
Sbjct: 39 RRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVV 98
Query: 346 EAQNIFERMEERDLVSWNIMI------------SMFFQENLNETAILTYLKM-----RRV 388
A+ +F+ M ER++ +WN MI S F+E +T+++M +R+
Sbjct: 99 SARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRI 158
Query: 389 GIE---------PDEF----TYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAY 435
IE P E + +LG + + +E I V + +++ Y
Sbjct: 159 EIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGY 218
Query: 436 CRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
R G ++ A IF + + L+ WNT+I+G+ NG ++ F + +P+A
Sbjct: 219 FRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVS 278
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
G++VH I G + NAL+ MYAKCG L+ + VF ++ R
Sbjct: 279 SILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
N++IS A HG+GKEA+ F M+ S ++PD TF VL+AC H G + +G +I
Sbjct: 339 SVACCNSMISCLAIHGKGKEALEMFSTME-SLDLKPDEITFIAVLTACVHGGFLMEGLKI 397
Query: 616 FDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHG 675
F M P+V HF C++ LLGRSG L+EA RL+K + N + +L AC H
Sbjct: 398 FSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHM 456
Query: 676 NLRLGRMVARLLLEKDHNNPSVY-----VLLSNICAAAGQWEEAANLRDMMREFGTTKQP 730
+ + V + ++E + + Y +SN+ A +W+ A LR M + G K P
Sbjct: 457 DTEMAEQVMK-IIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSP 515
Query: 731 GCS 733
G S
Sbjct: 516 GLS 518
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 158/341 (46%), Gaps = 41/341 (12%)
Query: 189 GVRPDGYTFTSMLSL------CSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCG 242
G+R G F + L C V + G+ +HS I+ G + V +SLI+MY CG
Sbjct: 36 GIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCG 95
Query: 243 CVVDAYQVFGEVEAGLRDHVTYNAMIDGL---------------VRVDRNEDAFV-MFR- 285
CVV A +VF E+ R+ T+NAMI G + V RN ++ M +
Sbjct: 96 CVVSARKVFDEMPE--RNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKG 153
Query: 286 -----DMQKA--CFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNA----- 333
+++KA F M +V + L V + F NA
Sbjct: 154 YGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSL 213
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
M+ Y G V+EA+ IF R+ RDLV WN +I+ + Q ++ AI + M+ G EPD
Sbjct: 214 MMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPD 273
Query: 394 EFTYGSLLGA---SDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFS 449
T S+L A S L V VHSL++ G+ + V N+LI Y + G + A +F
Sbjct: 274 AVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFE 333
Query: 450 NLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
++ +S+ N++IS +G + LE FS + + LKP+
Sbjct: 334 SISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPD 374
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 177/406 (43%), Gaps = 19/406 (4%)
Query: 76 TTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSA 135
G LH+ +I+ G+ + V +SL+S+Y K + S + F E+ + +W M+
Sbjct: 62 VVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGG 121
Query: 136 STRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
G A LF+++ N W +I G + A +LF M +
Sbjct: 122 YMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYG-KRIEIEKARELFERMPFELKNVKAW 180
Query: 196 TFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
+ + + + ++ D + + ++ F V + +++ YF G V +A +F V
Sbjct: 181 SVMLGVYVNNRKMEDARKFFEDIPEKNAF-----VWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVG 312
A RD V +N +I G + ++DA F +MQ + P T S++S+C+ L VG
Sbjct: 236 A--RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG 293
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
+ + G + V+NA + MY+ G + A ++FE + R + N MIS
Sbjct: 294 REVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIH 353
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS----LQVVEMVHSLLSKIGLMKVEVL 428
+ A+ + M + ++PDE T+ ++L A ++ +++ + ++ V+
Sbjct: 354 GKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHF 413
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQ 474
LI R+G++ A ++ + K N + G L C +
Sbjct: 414 GCLIHLLGRSGKLKEAYRLVKEMHVKP----NDTVLGALLGACKVH 455
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 167/626 (26%), Positives = 299/626 (47%), Gaps = 29/626 (4%)
Query: 122 EYPDD--YSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAF 179
E P D Y+ + + G++ A + FD+M R +V +N +I+ + G A
Sbjct: 40 ENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVR-DVVTYNLLISG-NSRYGCSLRAI 97
Query: 180 DLFRDMQKIGVRPDGYTFTSMLSLCSVELL-DFGRHVHSVVIRSGFLARTSVVNSLITMY 238
+L+ +M G+R TF S+LS+CS EL G VH VI GF V ++L+ +Y
Sbjct: 98 ELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLY 157
Query: 239 FNCGCVVD-AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEA 297
C +VD A ++F E+ R+ N ++ + ++ F ++ M+ +
Sbjct: 158 -ACLRLVDVALKLFDEMLD--RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGL 214
Query: 298 TFVSVMSSCSSLRV---GCQAQAQSIKTGFD-AYTAVNNATMTMYSCFGKVNEAQNIFER 353
T+ ++ CS R+ G Q + +K+G++ + V N + YS G ++ + F
Sbjct: 215 TYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNA 274
Query: 354 MEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDSLQVV 410
+ E+D++SWN ++S+ ++ + KM+ G P + S L + +Q
Sbjct: 275 VPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG 334
Query: 411 EMVHSLLSKIG--LMKVEVLNSLIAAYCR-NGRINWALQIFSNLPYKSLISWNTIISGFL 467
+ +H + K+G + + V ++LI Y + NG N AL ++ +LP +L N++++ +
Sbjct: 335 KQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL-LYQSLPCLNLECCNSLMTSLM 393
Query: 468 TNGCPLQGLEQFSALLN--TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSE 525
G +E F +++ T + VH ++ G++++
Sbjct: 394 HCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAAD 453
Query: 526 ISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQI 585
+++ +L+ Y K G + S VF+ + + ++I+ YA++G G + V M
Sbjct: 454 VAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMD- 512
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYL 645
+ PD T VLS CSH GLV++G IFD + + YG P ++C+VDLLGR+G +
Sbjct: 513 RMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLV 572
Query: 646 EEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNIC 705
E+AERL+ A+ SL +C H N +GR A +L+ + N +VY+ +S
Sbjct: 573 EKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFY 632
Query: 706 AAAGQWE------EAANLRDMMREFG 725
G +E E A R++MRE G
Sbjct: 633 FEIGDFEISRQIREIAASRELMREIG 658
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 200/400 (50%), Gaps = 13/400 (3%)
Query: 347 AQNIFERMEERDLVSWNIMI---SMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
A +IF+ +E + ++ MI S Q +L L +K I P T+ L+ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 404 SDS---LQVVEMVHSLLSKIG--LMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS 458
V + +H + K G L V ++ Y + + A ++F +P ++
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 459 WNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYIL 518
W+ +++G++ G +GLE F +L L+P+ + GK +H ++
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 519 RHGF-SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAV 577
+ + S++ +G ALV MYAKCG ++ ++ VF + +R+ SW ALI YA +G K+A+
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAM 305
Query: 578 CCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVD 637
C E ++ GI+PD VL+AC+H G +++G + + M Y P +H+SCIVD
Sbjct: 306 TCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVD 365
Query: 638 LLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNN--- 694
L+ R+G L++A LI+ +++ +L + C H N+ LG + + LL+ + N
Sbjct: 366 LMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEE 425
Query: 695 -PSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCS 733
+ V LSNI + + EA+ +R M+ + G K PG S
Sbjct: 426 EEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 465
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 161/384 (41%), Gaps = 65/384 (16%)
Query: 31 TRSNQHTESLKLFTQI--HSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIR 88
+RS+Q L+ F + + P + T I A A + G Q+H ++
Sbjct: 89 SRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK----ACFFSVGKQIHCWVVK 144
Query: 89 TGL-KAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALK 147
G+ + SHV +L +Y + + L DA K
Sbjct: 145 NGVFLSDSHVQTGVLRIYVEDKLLL-------------------------------DARK 173
Query: 148 LFDQMPNRSNVAVWNAII---TRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLC 204
+FD++P + +V W+ ++ RCG + ++FR+M G+ PD ++ T+ L+ C
Sbjct: 174 VFDEIP-QPDVVKWDVLMNGYVRCGLGSE----GLEVFREMLVKGLEPDEFSVTTALTAC 228
Query: 205 S-VELLDFGRHVHSVVIRSGFLARTSVV-NSLITMYFNCGCVVDAYQVFGEVEAGLRDHV 262
+ V L G+ +H V + ++ V +L+ MY CGC+ A +VF ++ R+
Sbjct: 229 AQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTR--RNVF 286
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKA-CFSPMEATFVSVMSSCSSLRVGCQAQAQSIK 321
++ A+I G + A +++ P + V+++C+ G + +S+
Sbjct: 287 SWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACA--HGGFLEEGRSML 344
Query: 322 TGFDAYTAVNNATMTMYSCF-------GKVNEAQNIFERMEERDLVS-WNIMIS---MFF 370
+A + YSC G++++A N+ E+M + L S W +++
Sbjct: 345 ENMEARYEI-TPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHK 403
Query: 371 QENLNETAILTYLKMRRVGIEPDE 394
L E A+ L + + +E +E
Sbjct: 404 NVELGELAVKNLLDLEKGNVEEEE 427
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 159/377 (42%), Gaps = 21/377 (5%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ----VFGEVEAGLRDHVTYNAMI 268
+ HS+ I G T ++ L+T + + + + +F +E + + Y+ MI
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIE--IPNSFVYDTMI 85
Query: 269 DGLVRVDRNE---DAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKT 322
R + F++ ++ +P TF ++ +C VG Q +K
Sbjct: 86 RICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKN 145
Query: 323 G-FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILT 381
G F + + V + +Y + +A+ +F+ + + D+V W+++++ + + L +
Sbjct: 146 GVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEV 205
Query: 382 YLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLMKVEVL--NSLIAAYC 436
+ +M G+EPDEF+ + L A + + + +H + K ++ +V +L+ Y
Sbjct: 206 FREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYA 265
Query: 437 RNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP-LKPNAYXXX 495
+ G I A+++F L +++ SW +I G+ G + + L +KP++
Sbjct: 266 KCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLL 325
Query: 496 XXXXXXXXXXXXXHGKQ-VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK 554
G+ + R+ + + + +V + + G LD +L + M
Sbjct: 326 GVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPM 385
Query: 555 RDTIS-WNALISAYAQH 570
+ S W AL++ H
Sbjct: 386 KPLASVWGALLNGCRTH 402
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 175/332 (52%), Gaps = 12/332 (3%)
Query: 413 VHSLLSKIGLMKV-EVLNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNTIISGFLTNG 470
+H+L+ K+G V ++ SL+ Y G +++A Q+F P K +++ W +IS + N
Sbjct: 87 IHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENE 146
Query: 471 CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG--FSSEISL 528
++ +E F + ++ + G++++ ++ + +++L
Sbjct: 147 NSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTL 206
Query: 529 GNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQI--- 585
N+L+ MY K G + + +F+ +++D ++ ++I YA +GQ +E++ F+ M+
Sbjct: 207 RNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQ 266
Query: 586 --SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSG 643
I P+ TF VL ACSH GLV++G R F M+ Y P HF C+VDL RSG
Sbjct: 267 SQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSG 326
Query: 644 YLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSN 703
+L++A I N+ I +L AC+ HGN+ LG V R + E D ++ YV LSN
Sbjct: 327 HLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSN 386
Query: 704 ICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
I A+ G W+E + +RD +R+ + PG SWI
Sbjct: 387 IYASKGMWDEKSKMRDRVRK---RRMPGKSWI 415
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 46/296 (15%)
Query: 21 LKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGN 80
LK NH L S + ++L F D +++ AI S+ + ++ G
Sbjct: 29 LKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD---GR 85
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
Q+HA + G A + SL+ Y+ D+ DY
Sbjct: 86 QIHALVRKLGFNAVIQIQTSLVGFYSSVGDV--------------DY------------- 118
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSM 200
A ++FD+ P + N+ +W A+I+ +N + A +LF+ M+ + DG T
Sbjct: 119 ----ARQVFDETPEKQNIVLWTAMIS-AYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 201 LSLCS-VELLDFGRHVHSVVI-RSGFLART-SVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
LS C+ + + G ++S I R LA ++ NSL+ MY G A ++F E+
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFD--ESM 231
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDM------QKACFSPMEATFVSVMSSCS 307
+D TY +MI G + +++ +F+ M Q +P + TF+ V+ +CS
Sbjct: 232 RKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACS 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 23/281 (8%)
Query: 212 GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGL 271
GR +H++V + GF A + SL+ Y + G V A QVF E ++ V + AMI
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK-QNIVLWTAMISAY 142
Query: 272 VRVDRNEDAFVMFRDMQKACFSPMEATFVSV-MSSCSSL---RVGCQAQAQSIKTG--FD 325
+ + +A +F+ M+ ++ V+V +S+C+ L ++G + ++SIK
Sbjct: 143 TENENSVEAIELFKRMEAEKIE-LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLA 201
Query: 326 AYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKM 385
+ N+ + MY G+ +A+ +F+ +D+ ++ MI + + ++ + KM
Sbjct: 202 MDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM 261
Query: 386 RRVG------IEPDEFTY-GSLLGASDSLQVVE---MVHSLLSKIGLMKVEV-LNSLIAA 434
+ + I P++ T+ G L+ S S V E S++ L E ++
Sbjct: 262 KTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDL 321
Query: 435 YCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
+CR+G + A + + +P K NT+I L C L G
Sbjct: 322 FCRSGHLKDAHEFINQMPIKP----NTVIWRTLLGACSLHG 358
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 454 KSLISWNTIISGFLTNGCPLQGLEQFS-ALLNTPLKPNAYXXX-XXXXXXXXXXXXXHGK 511
KSL S N + +L +G P++ L F +P +++ G+
Sbjct: 27 KSLKS-NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGR 85
Query: 512 QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMV-KRDTISWNALISAYAQH 570
Q+H + + GF++ I + +LV Y+ G +D + VF+ K++ + W A+ISAY ++
Sbjct: 86 QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTEN 145
Query: 571 GQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIF 616
EA+ F+ M+ + IE D T+ LSAC+ +G V G I+
Sbjct: 146 ENSVEAIELFKRME-AEKIELDGVIVTVALSACADLGAVQMGEEIY 190
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 109/253 (43%), Gaps = 36/253 (14%)
Query: 6 FSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITA 65
++RQ+ T + I+ +++ T + E+++LF ++ + + D ++ A++A
Sbjct: 118 YARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEA-EKIELDGVIVTVALSA 176
Query: 66 SANTRPAATATTFGNQLHAHAIRTG--LKAHSHVANSLLSLYAKAEDLASVERAFAEIEY 123
A+ A G ++++ +I+ L + NSLL++Y K+ + + F E
Sbjct: 177 CADL----GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMR 232
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFR 183
D ++T+M+ G ++L+LF +M D D V
Sbjct: 233 KDVTTYTSMIFGYALNGQAQESLELFKKMKT---------------IDQSQDTV------ 271
Query: 184 DMQKIGVRPDGYTFTSMLSLCSVE-LLDFG-RHVHSVVIRSGFLARTSVVNSLITMYFNC 241
+ P+ TF +L CS L++ G RH S+++ R + ++ ++
Sbjct: 272 ------ITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRS 325
Query: 242 GCVVDAYQVFGEV 254
G + DA++ ++
Sbjct: 326 GHLKDAHEFINQM 338
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 180/347 (51%), Gaps = 19/347 (5%)
Query: 407 LQVVEMVHSLLSKIGLMKVEVL--NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIIS 464
L+V +VH ++ K+G + L +L+ Y +NG + +A ++F +P ++ ++WN +I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 465 GFLT-------NGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYI 517
G+ + N L + + + ++P G VHGYI
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 518 LRHGFSSEIS--LGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKE 575
+ GF+ E+ +G ALV MY+KCG L+ + VF M ++ +W ++ + A +G+G E
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 576 AVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCI 635
M S GI+P+ TFT +LSA H+GLV++G +F M +G P ++H+ CI
Sbjct: 307 TPNLLNRMAES-GIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365
Query: 636 VDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNP 695
VDLLG++G ++EA + I ++ + SL +AC+ +G +G + + LLE + +
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDE 425
Query: 696 SV-------YVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ YV LSN+ A G+W E LR M+E +PG S++
Sbjct: 426 KLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 28/287 (9%)
Query: 209 LDFGRHVHSVVIRSGFLARTSVV-NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAM 267
L GR VH +V + GFL + ++ +L+ Y G + A +VF E+ R VT+NAM
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPE--RTSVTWNAM 184
Query: 268 IDGLV-RVDRN----EDAFVMFRDMQKACFS---PMEATFVSVMSSCSS---LRVGCQAQ 316
I G D+ A V+FR C S P + T V V+S+ S L +G
Sbjct: 185 IGGYCSHKDKGNHNARKAMVLFRRFS-CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVH 243
Query: 317 AQSIKTGF--DAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMIS-MFFQEN 373
K GF + + A + MYS G +N A ++FE M+ +++ +W M + +
Sbjct: 244 GYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGR 303
Query: 374 LNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV----EMVHSLLSKIGLMKV-EVL 428
NET L +M GI+P+E T+ SLL A + +V E+ S+ ++ G+ V E
Sbjct: 304 GNETPNLLN-RMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHY 362
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQG 475
++ + GRI A Q +P K + I+ L N C + G
Sbjct: 363 GCIVDLLGKAGRIQEAYQFILAMPIKP----DAILLRSLCNACSIYG 405
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 12/192 (6%)
Query: 123 YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAII-TRCG-ADNGHDDV--A 178
Y + TT+L + G + A K+FD+MP R++V WNA+I C D G+ + A
Sbjct: 144 YESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVT-WNAMIGGYCSHKDKGNHNARKA 202
Query: 179 FDLFRDMQ--KIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVV--NS 233
LFR GVRP T +LS S LL+ G VH + + GF V +
Sbjct: 203 MVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTA 262
Query: 234 LITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFS 293
L+ MY CGC+ +A+ VF ++ +++ T+ +M GL R + + M ++
Sbjct: 263 LVDMYSKCGCLNNAFSVFELMK--VKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIK 320
Query: 294 PMEATFVSVMSS 305
P E TF S++S+
Sbjct: 321 PNEITFTSLLSA 332
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 142/330 (43%), Gaps = 24/330 (7%)
Query: 267 MIDGLVRVDRNEDAFVMFRDM--QKACFSPMEATFVSVMSSCSS------LRVGCQAQAQ 318
+ + L++ + ED+ +F + + + E TFV V+ +C+ LRVG
Sbjct: 77 LFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGM 136
Query: 319 SIKTGFDAYTAVNNATMT-MYSCFGKVNEAQNIFERMEERDLVSWNIMISMF--FQENLN 375
K GF + + T+ Y+ G + A+ +F+ M ER V+WN MI + ++ N
Sbjct: 137 VKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGN 196
Query: 376 ETAILTYLKMRRV-----GIEPDEFTYGSLLGA---SDSLQVVEMVHSLLSKIGL---MK 424
A + RR G+ P + T +L A + L++ +VH + K+G +
Sbjct: 197 HNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVD 256
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN 484
V + +L+ Y + G +N A +F + K++ +W ++ +G NG + + +
Sbjct: 257 VFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAE 316
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYI-LRHGFSSEISLGNALVTMYAKCGSLD 543
+ +KPN G ++ + R G + I +V + K G +
Sbjct: 317 SGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQ 376
Query: 544 GSLGVFNAM-VKRDTISWNALISAYAQHGQ 572
+ AM +K D I +L +A + +G+
Sbjct: 377 EAYQFILAMPIKPDAILLRSLCNACSIYGE 406
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 216/428 (50%), Gaps = 6/428 (1%)
Query: 312 GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQ 371
G Q +K+G V N + YS +++ FE ++ +W+ +IS F Q
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 372 ENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGL-MKVEV 427
L ++ KM + PD+ S + L ++ VH L K G V V
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
+SL+ Y + G I +A ++F +P +++++W+ ++ G+ G + L F L L
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
N Y G+Q+HG ++ F S +G++LV++Y+KCG +G+
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 548 VFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG 607
VFN + ++ WNA++ AYAQH ++ + F+ M++S G++P+ TF VL+ACSH G
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLS-GMKPNFITFLNVLNACSHAG 332
Query: 608 LVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSL 667
LVD+G FD M P+ H++ +VD+LGR+G L+EA +I ++ +L
Sbjct: 333 LVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
Query: 668 FSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTT 727
++C H N L A + E + +++ LSN AA G++E+AA R ++R+ G
Sbjct: 392 LTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEK 451
Query: 728 KQPGCSWI 735
K+ G SW+
Sbjct: 452 KETGLSWV 459
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 199/411 (48%), Gaps = 48/411 (11%)
Query: 63 ITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE 122
+ +SA TR +T G QLH + +++GL VAN+L++ Y+K++
Sbjct: 22 LLSSARTR----STIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQ------------- 64
Query: 123 YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLF 182
P D+ + F+ P +S+ + I C A N ++ +
Sbjct: 65 LP------------------FDSRRAFEDSPQKSSTTW--SSIISCFAQNELPWMSLEFL 104
Query: 183 RDMQKIGVRPDGYTFTSMLSLCSV-ELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNC 241
+ M +RPD + S C++ D GR VH + +++G+ A V +SL+ MY C
Sbjct: 105 KKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKC 164
Query: 242 GCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
G +V A ++F E+ R+ VT++ M+ G ++ NE+A +F++ + + +F S
Sbjct: 165 GEIVYARKMFDEMPQ--RNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSS 222
Query: 302 VMSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERD 358
V+S C++ L +G Q SIK+ FD+ + V ++ +++YS G A +F + ++
Sbjct: 223 VISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKN 282
Query: 359 LVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLS 418
L WN M+ + Q + + I + +M+ G++P+ T+ ++L A +V+
Sbjct: 283 LGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFD 342
Query: 419 KIGLMKVEVLN----SLIAAYCRNGRINWALQIFSNLPYKSLIS-WNTIIS 464
++ ++E + SL+ R GR+ AL++ +N+P S W +++
Sbjct: 343 QMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 40/257 (15%)
Query: 52 LRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDL 111
LRPD + L +A + A + G +H +++TG A V +SL+ +YAK ++
Sbjct: 112 LRPDDHVLPSATKSCA----ILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEI 167
Query: 112 ASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGAD 171
+ F E+ + +W+ M+ ++G +AL LF +
Sbjct: 168 VYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA------------------- 208
Query: 172 NGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSV 230
LF ++ + Y+F+S++S+C+ LL+ GR +H + I+S F + + V
Sbjct: 209 ---------LFENLA-----VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFV 254
Query: 231 VNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
+SL+++Y CG AYQVF EV +++ +NAM+ + + +F+ M+ +
Sbjct: 255 GSSLVSLYSKCGVPEGAYQVFNEVP--VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLS 312
Query: 291 CFSPMEATFVSVMSSCS 307
P TF++V+++CS
Sbjct: 313 GMKPNFITFLNVLNACS 329
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 158/367 (43%), Gaps = 10/367 (2%)
Query: 212 GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGL 271
G +H V++SG V N+LI Y D+ + F ++ + T++++I
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFE--DSPQKSSTTWSSIISCF 91
Query: 272 VRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYT 328
+ + + + M P + S SC+ L +G S+KTG+DA
Sbjct: 92 AQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADV 151
Query: 329 AVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRV 388
V ++ + MY+ G++ A+ +F+ M +R++V+W+ M+ + Q NE A+ + +
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211
Query: 389 GIEPDEFTYGSLLGA---SDSLQVVEMVHSL-LSKIGLMKVEVLNSLIAAYCRNGRINWA 444
+ +++++ S++ S L++ +H L + V +SL++ Y + G A
Sbjct: 212 NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 445 LQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXX 504
Q+F+ +P K+L WN ++ + + + +E F + + +KPN
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 505 XXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTIS-WNAL 563
G+ + +LV M + G L +L V M T S W AL
Sbjct: 332 GLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
Query: 564 ISAYAQH 570
+++ H
Sbjct: 392 LTSCTVH 398
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 200/400 (50%), Gaps = 13/400 (3%)
Query: 347 AQNIFERMEERDLVSWNIMI---SMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
A +IF+ +E + ++ MI S Q +L L +K I P T+ L+ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 404 SDS---LQVVEMVHSLLSKIGLMKVE--VLNSLIAAYCRNGRINWALQIFSNLPYKSLIS 458
V + +H + K G+ + V ++ Y + + A ++F +P ++
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 459 WNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYIL 518
W+ +++G++ G +GLE F +L ++P+ + GK +H ++
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 519 RHGF-SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAV 577
+ + S++ +G ALV MYAKCG ++ ++ VF + +R+ SW ALI YA +G K+A
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKAT 305
Query: 578 CCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVD 637
C + ++ GI+PD VL+AC+H G +++G + + M YG P +H+SCIVD
Sbjct: 306 TCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVD 365
Query: 638 LLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNN--- 694
L+ R+G L++A LI+ +++ +L + C H N+ LG + + LL+ + N
Sbjct: 366 LMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEE 425
Query: 695 -PSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCS 733
+ V LSNI + + EA +R M+ + G K PG S
Sbjct: 426 EEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 158/377 (41%), Gaps = 21/377 (5%)
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ----VFGEVEAGLRDHVTYNAMI 268
+ HS+ I G T ++ L+T + + + + +F +E + + Y+ MI
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIE--IPNSFVYDTMI 85
Query: 269 DGLVRVDRNE---DAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKT 322
R + F++ ++ +P TF ++ +C VG Q +K
Sbjct: 86 RICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKN 145
Query: 323 G-FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILT 381
G F + V + +Y + +A+ +F+ + + D+V W+++++ + + L +
Sbjct: 146 GVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEV 205
Query: 382 YLKMRRVGIEPDEFTYGSLLGASDSLQVV---EMVHSLLSKIGLMKVEVL--NSLIAAYC 436
+ +M GIEPDEF+ + L A + + + +H + K ++ +V +L+ Y
Sbjct: 206 FKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYA 265
Query: 437 RNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP-LKPNAYXXX 495
+ G I A+++F L +++ SW +I G+ G + + +KP++
Sbjct: 266 KCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLL 325
Query: 496 XXXXXXXXXXXXXHGK-QVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK 554
G+ + R+G + + + +V + + G LD +L + M
Sbjct: 326 GVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPM 385
Query: 555 RDTIS-WNALISAYAQH 570
+ S W AL++ H
Sbjct: 386 KPLASVWGALLNGCRTH 402
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 230/515 (44%), Gaps = 48/515 (9%)
Query: 260 DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQ 316
D ++ ++ L + + ++ ++ DM + P SV+ +C + G
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 317 AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNE 376
AQ++K G V + +YS G + A+ F+ + E++ VSWN ++ + + +
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 377 TAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYC 436
A + K+ E D ++ ++ + + SL S + L N LI Y
Sbjct: 188 EARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV 243
Query: 437 RNGRINWALQIFSNLPYKSLISWNTIISGFLT---------------------------- 468
+ A F +P K+ +SW T+ISG+
Sbjct: 244 NCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 303
Query: 469 ---NGCPLQGLEQFSALL--NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFS 523
NG P L+ F+ +L N+ ++P+ G V YI HG
Sbjct: 304 YTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIK 363
Query: 524 SEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAM 583
+ L +L+ +Y K G + +F+ + K+DT+S++A+I +G EA F AM
Sbjct: 364 IDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM 423
Query: 584 QISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSG 643
I I P+ TFT +LSA SH GLV +G + F+ M + + PS DH+ +VD+LGR+G
Sbjct: 424 -IEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAG 481
Query: 644 YLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVAR--LLLEKDHNNPSVYVL- 700
LEEA LIK N+ + +L A H N+ G + + LE D P+ Y+
Sbjct: 482 RLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETD---PTGYLSH 538
Query: 701 LSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
L+ I ++ G+W++A +RD ++E K GCSW+
Sbjct: 539 LAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWV 573
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 188/446 (42%), Gaps = 45/446 (10%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
L+ L++ + E++ ++ +H+S + P + +++ + A G +HA
Sbjct: 75 LVRFLSQHRKFKETVDVYIDMHNS-GIPPSSHAVTSVLRACGKMENMVD----GKPIHAQ 129
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
A++ GL +V L+ LY++ + ++AF +I + SW ++L G + +A
Sbjct: 130 ALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA 189
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
++FD++P + V+ WN II+ A G A LF M + S S
Sbjct: 190 RRVFDKIPEKDAVS-WNLIISSY-AKKGDMGNACSLFSAM-------------PLKSPAS 234
Query: 206 VELLDFGRHVHSVVIRSGFLARTSVVN----------SLITMYFNCGCVVDAYQVFGEVE 255
+L G V R LART ++I+ Y G V A ++F +
Sbjct: 235 WNILIGGY----VNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMS 290
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM--QKACFSPMEATFVSVMSSCSSL---R 310
+D + Y+AMI + + +DA +F M + + P E T SV+S+ S L
Sbjct: 291 K--KDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS 348
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFF 370
G ++ + G ++ + + +Y G +A +F + ++D VS++ MI
Sbjct: 349 FGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCG 408
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEV--- 427
+ A + M I P+ T+ LL A +V+ + + + +E
Sbjct: 409 INGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSAD 468
Query: 428 -LNSLIAAYCRNGRINWALQIFSNLP 452
++ R GR+ A ++ ++P
Sbjct: 469 HYGIMVDMLGRAGRLEEAYELIKSMP 494
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 185/453 (40%), Gaps = 64/453 (14%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I+ + + N LL S + E+ ++F +I P+ +S + S+ +
Sbjct: 165 IAEKNTVSWNSLLHGYLESGELDEARRVFDKI-------PEKDAVSWNLIISSYAKK--- 214
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVA-NSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
G+ +A ++ + + S + N L+ Y ++ F + + SW TM+
Sbjct: 215 ----GDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMI 270
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG--VR 191
S T+LG V A +LF M + + V++A+I C NG A LF M + ++
Sbjct: 271 SGYTKLGDVQSAEELFRLMSKKDKL-VYDAMIA-CYTQNGKPKDALKLFAQMLERNSYIQ 328
Query: 192 PDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
PD T +S++S S + FG V S + G + SLI +Y G A+++
Sbjct: 329 PDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKM 388
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR 310
F + +D V+Y+AMI G +A +F M + P TF ++S+
Sbjct: 389 FSNLNK--KDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSA----- 441
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS----WNIMI 366
YS G V E F M++ +L + IM+
Sbjct: 442 ---------------------------YSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMV 474
Query: 367 SMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGAS---DSLQVVEMVHSLLSKIGLM 423
M + E A Y ++ + ++P+ +G+LL AS ++++ E+ S K+
Sbjct: 475 DMLGRAGRLEEA---YELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETD 531
Query: 424 KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL 456
L+ L Y GR + A + ++ K L
Sbjct: 532 PTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKL 564
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 28/300 (9%)
Query: 344 VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
V + I + D SW ++ Q + + Y+ M GI P S+L A
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 404 SDSLQVV---EMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISW 459
++ + + +H+ K GL V V L+ Y R G I A + F ++ K+ +SW
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 460 NTIISGFLTNGCPLQGLEQFSAL-----LNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVH 514
N+++ G+L +G + F + ++ L ++Y K
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA 233
Query: 515 GY-ILRHGFSS--EISL------------GNALVTM---YAKCGSLDGSLGVFNAMVKRD 556
+ IL G+ + E+ L G + +TM Y K G + + +F M K+D
Sbjct: 234 SWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKD 293
Query: 557 TISWNALISAYAQHGQGKEAVCCFEAM-QISPGIEPDHATFTIVLSACSHVGLVDDGTRI 615
+ ++A+I+ Y Q+G+ K+A+ F M + + I+PD T + V+SA S +G GT +
Sbjct: 294 KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV 353
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 163/329 (49%), Gaps = 7/329 (2%)
Query: 410 VEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNL---PYKSLISWNTIISGF 466
V L +I V N++I+ Y G++ A++++ + P +S S+N II G
Sbjct: 99 VSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES--SFNAIIKGL 156
Query: 467 L-TNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSE 525
+ T + +E + ++ KPN K++H Y R+
Sbjct: 157 VGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPH 216
Query: 526 ISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQI 585
L + LV Y +CGS+ VF++M RD ++W++LISAYA HG + A+ F+ M++
Sbjct: 217 PQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMEL 276
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYL 645
+ + PD F VL ACSH GL D+ F M YG S DH+SC+VD+L R G
Sbjct: 277 AK-VTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRF 335
Query: 646 EEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNIC 705
EEA ++I+ + +L AC +G + L + AR LL + NP+ YVLL I
Sbjct: 336 EEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIY 395
Query: 706 AAAGQWEEAANLRDMMREFGTTKQPGCSW 734
+ G+ EEA LR M+E G PG SW
Sbjct: 396 MSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 182/404 (45%), Gaps = 23/404 (5%)
Query: 10 MSTTTISS-EQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASAN 68
MS++ SS +++ L L++ H ++L LF Q+HSS L D + S A+ + A
Sbjct: 1 MSSSYASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCA- 59
Query: 69 TRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYS 128
AA G +HAH++++ ++ V +LL +Y K ++ + F EI +
Sbjct: 60 ---AAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVV 116
Query: 129 WTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIIT-RCGADNGHDDVAFDLFRDMQK 187
W M+S T G V +A++L++ M N + +NAII G ++G A + +R M +
Sbjct: 117 WNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR-AIEFYRKMIE 175
Query: 188 IGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD 246
+P+ T +++S CS + + +HS R+ + + L+ Y CG +V
Sbjct: 176 FRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVY 235
Query: 247 AYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC 306
VF +E RD V ++++I E A F++M+ A +P + F++V+ +C
Sbjct: 236 VQLVFDSMED--RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKAC 293
Query: 307 SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCF-------GKVNEAQNIFERMEERDL 359
S + +A + D A+ YSC G+ EA + + M E+
Sbjct: 294 SHAGLADEALVYFKRMQGDYGL---RASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPT 350
Query: 360 V-SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
+W ++ N E + + +EP+ LLG
Sbjct: 351 AKTWGALLGAC--RNYGEIELAEIAARELLMVEPENPANYVLLG 392
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 161/367 (43%), Gaps = 45/367 (12%)
Query: 170 ADNGHDDVAFDLFRDMQKIGVRP-DGYTFTSMLSLCSVELLD-FGRHVHSVVIRSGFLA- 226
A+ G+ + A +LF M P D + F+ L C+ G VH+ ++S FL+
Sbjct: 23 ANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSN 82
Query: 227 -----------------------------RTSVV-NSLITMYFNCGCVVDAYQVFGEVEA 256
R +VV N++I+ Y +CG V +A +++ ++
Sbjct: 83 PFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDV 142
Query: 257 GLRDHVTYNAMIDGLVRV-DRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVG 312
+ + ++NA+I GLV D + A +R M + F P T ++++S+CS++ R+
Sbjct: 143 -MPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLI 201
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQE 372
+ + + + + + + + + Y G + Q +F+ ME+RD+V+W+ +IS +
Sbjct: 202 KEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALH 261
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKI----GL-MKVEV 427
E+A+ T+ +M + PD+ + ++L A + + ++ GL +
Sbjct: 262 GDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDH 321
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNTIISGFLTNG-CPLQGLEQFSALLNT 485
+ L+ R GR A ++ +P K + +W ++ G L + L+
Sbjct: 322 YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVE 381
Query: 486 PLKPNAY 492
P P Y
Sbjct: 382 PENPANY 388
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 50/257 (19%)
Query: 510 GKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQ 569
G VH + ++ F S +G AL+ MY KC S+ + +F+ + +R+ + WNA+IS Y
Sbjct: 67 GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 570 HGQGKEAVCCFEAMQISPG--------------------------------IEPDHATFT 597
G+ KEAV +EAM + P +P+ T
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 598 IVLSACSHVGLVDDGTRIFDMMVNIYGFV------PSVDHFSCIVDLLGRSGYLEEAERL 651
++SACS +G F ++ I+ + P S +V+ GR G + + +
Sbjct: 187 ALVSACSAIG-------AFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLV 239
Query: 652 IKGGYFGANSNICW-SLFSACAAHGNLRLG-RMVARLLLEKDHNNPSVYVLLSNICAAAG 709
+ W SL SA A HG+ + + L K + ++ + C+ AG
Sbjct: 240 FDS--MEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAG 297
Query: 710 QWEEA-ANLRDMMREFG 725
+EA + M ++G
Sbjct: 298 LADEALVYFKRMQGDYG 314
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 204/417 (48%), Gaps = 8/417 (1%)
Query: 323 GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTY 382
GFD +A + YS G + EA +F + + DL WN+MI + + I +
Sbjct: 138 GFD--QICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLF 195
Query: 383 LKMRRVGIEPDEFTYGSLL-GASDS--LQVVEMVHSLLSKIGLMKVEVLN-SLIAAYCRN 438
M+ G +P+ +T +L G D L V VH+ KI L + +L+ Y R
Sbjct: 196 NLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRC 255
Query: 439 GRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXX 498
I A +F+++ L++ +++I+G+ G + L F+ L + KP+
Sbjct: 256 MCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVL 315
Query: 499 XXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTI 558
GK+VH Y++R G +I + +AL+ MY+KCG L ++ +F + +++ +
Sbjct: 316 GSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIV 375
Query: 559 SWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDM 618
S+N+LI HG A F + + G+ PD TF+ +L C H GL++ G IF+
Sbjct: 376 SFNSLILGLGLHGFASTAFEKFTEI-LEMGLIPDEITFSALLCTCCHSGLLNKGQEIFER 434
Query: 619 MVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLR 678
M + +G P +H+ +V L+G +G LEEA + +S I +L S C H N
Sbjct: 435 MKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTH 494
Query: 679 LGRMVARLLLEKDHNNPSVY-VLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
L +VA + + SVY V+LSN+ A G+W+E LRD + E K PG SW
Sbjct: 495 LAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 196/452 (43%), Gaps = 55/452 (12%)
Query: 48 SSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAK 107
S LR Y + I NT+ +LH+ ++ L + A L YA
Sbjct: 3 SQTQLRLIIYEFTRKIQTRLNTQ----------KLHSFVTKSKLARDPYFATQLARFYAL 52
Query: 108 AEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITR 167
+DL S A KLFD P RS V +WN+II R
Sbjct: 53 NDDLIS-------------------------------ARKLFDVFPERS-VFLWNSII-R 79
Query: 168 CGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFG-RHVHSVVIRSGFLA 226
A LF + + RPD +T+ + S G R +H + I SG
Sbjct: 80 AYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGF 139
Query: 227 RTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRD 286
++++ Y G +V+A ++F + D +N MI G + +F
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPD--PDLALWNVMILGYGCCGFWDKGINLFNL 197
Query: 287 MQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGK 343
MQ P T V++ S S L V A +K D+++ V A + MYS
Sbjct: 198 MQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMC 257
Query: 344 VNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+ A ++F + E DLV+ + +I+ + + ++ A+ + ++R G +PD +LG+
Sbjct: 258 IASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGS 317
Query: 404 ----SDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS 458
SDS+ E VHS + ++GL + ++V ++LI Y + G + A+ +F+ +P K+++S
Sbjct: 318 CAELSDSVSGKE-VHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVS 376
Query: 459 WNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
+N++I G +G E+F+ +L L P+
Sbjct: 377 FNSLILGLGLHGFASTAFEKFTEILEMGLIPD 408
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 174/385 (45%), Gaps = 50/385 (12%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYT---LSTAITASANTRPAATATTFGN 80
N ++ +++Q T L LF+QI S T RPD++T L+ + S +T+
Sbjct: 75 NSIIRAYAKAHQFTTVLSLFSQILRSDT-RPDNFTYACLARGFSESFDTKGLRC------ 127
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
+H AI +GL ++++ Y+KA G
Sbjct: 128 -IHGIAIVSGLGFDQICGSAIVKAYSKA-------------------------------G 155
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSM 200
+ +A KLF +P+ ++A+WN +I G G D +LF MQ G +P+ YT ++
Sbjct: 156 LIVEASKLFCSIPD-PDLALWNVMILGYGC-CGFWDKGINLFNLMQHRGHQPNCYTMVAL 213
Query: 201 LS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLR 259
S L LL VH+ ++ + + V +L+ MY C C+ A VF +
Sbjct: 214 TSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE--P 271
Query: 260 DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR---VGCQAQ 316
D V +++I G R +++A +F +++ + P V+ SC+ L G +
Sbjct: 272 DLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVH 331
Query: 317 AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNE 376
+ I+ G + V +A + MYS G + A ++F + E+++VS+N +I
Sbjct: 332 SYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFAS 391
Query: 377 TAILTYLKMRRVGIEPDEFTYGSLL 401
TA + ++ +G+ PDE T+ +LL
Sbjct: 392 TAFEKFTEILEMGLIPDEITFSALL 416
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 411 EMVHSLLSKIGLMKVEVLNSLIAA-YCRNGRINWALQIFSNLPYKSLISWNTIISGFLTN 469
+ +HS ++K L + + +A Y N + A ++F P +S+ WN+II +
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 470 GCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG 529
L FS +L + +P+ + + +HG + G + G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
+A+V Y+K G + + +F ++ D WN +I Y G + + F MQ G
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ-HRGH 203
Query: 590 EPDHATFTIVLSACSHVGLVD 610
+P+ T + S GL+D
Sbjct: 204 QPNCYTMVALTS-----GLID 219
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 186/378 (49%), Gaps = 9/378 (2%)
Query: 361 SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS---LQVVEMVHSLL 417
+WN++ + + +I Y +M+R GI+P++ T+ LL A S L + +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 418 SKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGL 476
K G V V N+LI Y + + A ++F + ++++SWN+I++ + NG
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 477 EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMY 536
E F ++ P+ GK VH ++ LG ALV MY
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 537 AKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATF 596
AK G L+ + VF MV ++ +W+A+I AQ+G +EA+ F M + P++ TF
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 597 TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGY 656
VL ACSH GLVDDG + F M I+ P + H+ +VD+LGR+G L EA IK
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 657 FGANSNICWSLFSACAAH---GNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEE 713
F ++ + +L SAC+ H + +G V + L+E + V+++N A A W E
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAE 437
Query: 714 AANLRDMMREFGTTKQPG 731
AA +R +M+E K G
Sbjct: 438 AAEVRRVMKETKMKKIAG 455
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 156/320 (48%), Gaps = 14/320 (4%)
Query: 156 SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVEL-LDFGRH 214
S + WN +++R + + + ++ +M++ G++P+ TF +L C+ L L GR
Sbjct: 76 STPSTWN-MLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 215 VHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRV 274
+ V++ GF V N+LI +Y C DA +VF E+ R+ V++N+++ LV
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTE--RNVVSWNSIMTALVEN 192
Query: 275 DRNEDAFVMFRDMQKACFSPMEATFVSVMSSC-SSLRVGCQAQAQSIKTGFDAYTAVNNA 333
+ F F +M F P E T V ++S+C +L +G +Q + + + A
Sbjct: 193 GKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTA 252
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLK-MRRVGIEP 392
+ MY+ G + A+ +FERM ++++ +W+ MI Q E A+ + K M+ + P
Sbjct: 253 LVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRP 312
Query: 393 DEFTYGSLLGASDSLQVVE----MVHSL--LSKIGLMKVEVLNSLIAAYCRNGRINWALQ 446
+ T+ +L A +V+ H + + KI M + +++ R GR+N A
Sbjct: 313 NYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHY-GAMVDILGRAGRLNEAYD 371
Query: 447 IFSNLPYK-SLISWNTIISG 465
+P++ + W T++S
Sbjct: 372 FIKKMPFEPDAVVWRTLLSA 391
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 168/354 (47%), Gaps = 6/354 (1%)
Query: 387 RVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQ 446
R G+ D FT +L+ + ++ L + V N LI + I A +
Sbjct: 145 RFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARE 204
Query: 447 IFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXX 506
+F ++P + L+SWN++ISG+ + ++ F ++ LKP+
Sbjct: 205 LFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGD 264
Query: 507 XXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISA 566
GK +H Y R + L LV YAKCG +D ++ +F + +WNA+I+
Sbjct: 265 WQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITG 324
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
A HG G+ V F M +S GI+PD TF VL CSH GLVD+ +FD M ++Y
Sbjct: 325 LAMHGNGELTVDYFRKM-VSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVN 383
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERLIKG-GYFGANSN--ICWS-LFSACAAHGNLRLGRM 682
+ H+ C+ DLLGR+G +EEA +I+ G N + WS L C HGN+ +
Sbjct: 384 REMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEK 443
Query: 683 VARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMM-REFGTTKQPGCSWI 735
A + + VY ++ + A A +WEE +R+++ R+ K G S +
Sbjct: 444 AANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 153/365 (41%), Gaps = 28/365 (7%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
I++ N ++ T + S K F ++ PD +T A A +
Sbjct: 74 ITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDL 133
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
T LH A+R GL + N+L+ +Y+ + S + F E D ++ ++
Sbjct: 134 --TLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLID 191
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+ + A +LFD MP R V+ WN++I+ N H A LF +M +G++PD
Sbjct: 192 GLVKAREIVRARELFDSMPLRDLVS-WNSLISGYAQMN-HCREAIKLFDEMVALGLKPDN 249
Query: 195 YTFTSMLSLCSVELLDF--GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
S LS C+ + D+ G+ +H R + + L+ Y CG + A ++F
Sbjct: 250 VAIVSTLSACA-QSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVG 312
+ T+NAMI GL E FR M + P TF+SV+ CS G
Sbjct: 309 LCSD--KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS--HSG 364
Query: 313 CQAQAQSIKTGFDAYTAVN--NATMTMYSCF-------GKVNEAQNIFERMEE-----RD 358
+A+++ FD ++ N M Y C G + EA + E+M +
Sbjct: 365 LVDEARNL---FDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 359 LVSWN 363
L++W+
Sbjct: 422 LLAWS 426
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 159/393 (40%), Gaps = 63/393 (16%)
Query: 134 SASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
SAS V A +F + N S +N II C + F +M++ V PD
Sbjct: 56 SASASKEVVSYATSVFRFITNPSTFC-FNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPD 114
Query: 194 GYTFTSMLSLCSVEL---LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
+TF + C+ + L + +H +R G L+ +N+LI +Y + A Q+
Sbjct: 115 FHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQL 174
Query: 251 FGEVEAGLRDHVTYNAMIDGLVR-------------------------------VDRNED 279
F E RD VTYN +IDGLV+ ++ +
Sbjct: 175 FDENPQ--RDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCRE 232
Query: 280 AFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSI-------KTGFDAYTAVNN 332
A +F +M P VS +S+C+ + G + ++I + D++ A
Sbjct: 233 AIKLFDEMVALGLKPDNVAIVSTLSACA--QSGDWQKGKAIHDYTKRKRLFIDSFLA--T 288
Query: 333 ATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEP 392
+ Y+ G ++ A IFE ++ L +WN MI+ E + + KM GI+P
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKP 348
Query: 393 DEFTYGSLLGASDSLQVVEMVHSLLSKIGLM-----KVEVLNSLIAAYCRNGRINWALQI 447
D T+ S+L +V+ +L ++ + +++ + R G I A ++
Sbjct: 349 DGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEM 408
Query: 448 FSNLP-----YKSLISWNTIISGFLTNGCPLQG 475
+P + L++W SG L GC + G
Sbjct: 409 IEQMPKDGGNREKLLAW----SGLL-GGCRIHG 436
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 4/153 (2%)
Query: 343 KVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
++ A+ +F+ M RDLVSWN +IS + Q N AI + +M +G++PD S L
Sbjct: 198 EIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLS 257
Query: 403 A---SDSLQVVEMVHSLLSKIGLMKVEVLNS-LIAAYCRNGRINWALQIFSNLPYKSLIS 458
A S Q + +H + L L + L+ Y + G I+ A++IF K+L +
Sbjct: 258 ACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFT 317
Query: 459 WNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
WN +I+G +G ++ F ++++ +KP+
Sbjct: 318 WNAMITGLAMHGNGELTVDYFRKMVSSGIKPDG 350
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 197/433 (45%), Gaps = 40/433 (9%)
Query: 339 SCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYG 398
S G V+ A ++ + WN +I F E +I Y++M R G+ PD TY
Sbjct: 53 SSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYP 112
Query: 399 SLLGASDSLQVVEM---VHSLLSKIGL--------------------------------M 423
L+ +S L ++ +H + K GL
Sbjct: 113 FLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK 172
Query: 424 KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALL 483
+ NS++ AY ++G + A +F + + +++W+++I G++ G + LE F ++
Sbjct: 173 NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMM 232
Query: 484 NT-PLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSL 542
K N GK VH YIL + L +L+ MYAKCGS+
Sbjct: 233 RMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSI 292
Query: 543 DGSLGVF-NAMVKR-DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
+ VF A VK D + WNA+I A HG +E++ F M+ S I+PD TF +L
Sbjct: 293 GDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESK-IDPDEITFLCLL 351
Query: 601 SACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGAN 660
+ACSH GLV + F + G P +H++C+VD+L R+G +++A I
Sbjct: 352 AACSHGGLVKEAWHFFKSLKE-SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPT 410
Query: 661 SNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDM 720
++ +L + C HGNL L V + L+E +N YV L+N+ A Q+ A ++R+
Sbjct: 411 GSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREA 470
Query: 721 MREFGTTKQPGCS 733
M + G K G S
Sbjct: 471 MEKKGVKKIAGHS 483
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 139/286 (48%), Gaps = 9/286 (3%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N ++ + S +S+ ++ Q+ L PDH T + +S+ + G LH
Sbjct: 77 NFVIRGFSNSRNPEKSISVYIQM-LRFGLLPDHMTYPFLMKSSSRL----SNRKLGGSLH 131
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+++GL+ + N+L+ +Y D AS + F E+ + + +W ++L A + G V
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGV-RPDGYTFTSMLS 202
A +FD+M R +V W+++I G + A ++F M ++G + + T S++
Sbjct: 192 SARLVFDEMSER-DVVTWSSMIDGY-VKRGEYNKALEIFDQMMRMGSSKANEVTMVSVIC 249
Query: 203 LCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDH 261
C+ + L+ G+ VH ++ + SLI MY CG + DA+ VF D
Sbjct: 250 ACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDA 309
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
+ +NA+I GL ++ +F M+++ P E TF+ ++++CS
Sbjct: 310 LMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 159/388 (40%), Gaps = 46/388 (11%)
Query: 128 SWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK 187
S T SA + G V A K ++ + N WN +I R +++ + + + ++ M +
Sbjct: 44 SQTLSFSALSSSGDVDYAYKFLSKLSDPPNYG-WNFVI-RGFSNSRNPEKSISVYIQMLR 101
Query: 188 IGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMY-------- 238
G+ PD T+ ++ S + G +H V++SG + N+LI MY
Sbjct: 102 FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQAS 161
Query: 239 -------------FNCGCVVDAYQVFGEV--------EAGLRDHVTYNAMIDGLVRVDRN 277
++DAY G+V E RD VT+++MIDG V+
Sbjct: 162 ARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEY 221
Query: 278 EDAFVMFRDMQKACFSPM-EATFVSVMSSCS---SLRVGCQAQAQSIKTGFDAYTAVNNA 333
A +F M + S E T VSV+ +C+ +L G + + +
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 334 TMTMYSCFGKVNEAQNIFER--MEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIE 391
+ MY+ G + +A ++F R ++E D + WN +I ++ + KMR I+
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 392 PDEFTYGSLLGA-SDSLQVVEMVH---SLLSKIGLMKVEVLNSLIAAYCRNGRINWALQI 447
PDE T+ LL A S V E H SL K E ++ R G + A
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDF 401
Query: 448 FSNLPYKSLISWNTIISGFLTNGCPLQG 475
S +P K S + G L NGC G
Sbjct: 402 ISEMPIKPTGS----MLGALLNGCINHG 425
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/361 (18%), Positives = 148/361 (40%), Gaps = 39/361 (10%)
Query: 406 SLQVVEMVHSLLSKIGLMKVEVLNSL---IAAYCRNGRINWALQIFSNLPYKSLISWNTI 462
S+ + +H+LL +GL + E S +A +G +++A + S L WN +
Sbjct: 20 SMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFV 79
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
I GF + P + + + +L L P+ G +H +++ G
Sbjct: 80 IRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGL 139
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYA-------------- 568
++ + N L+ MY + +F+ M ++ ++WN+++ AYA
Sbjct: 140 EWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDE 199
Query: 569 -----------------QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDD 611
+ G+ +A+ F+ M + + T V+ AC+H+G ++
Sbjct: 200 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 259
Query: 612 GTRIFDMMVNIYGFVP-SVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SLFS 669
G + +++++ +P +V + ++D+ + G + +A + + W ++
Sbjct: 260 GKTVHRYILDVH--LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
Query: 670 ACAAHGNLRLG-RMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTK 728
A+HG +R ++ ++ K + ++ L C+ G +EA + ++E G
Sbjct: 318 GLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEP 377
Query: 729 Q 729
+
Sbjct: 378 K 378
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 41/268 (15%)
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSI 320
+N +I G E + ++ M + P T+ +M S S L ++G +
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 321 KTGFDAYTAVNNATMTMYSCF-------------------------------GKVNEAQN 349
K+G + + N + MY F G V A+
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 350 IFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG-IEPDEFTYGSLLGASDSLQ 408
+F+ M ERD+V+W+ MI + + A+ + +M R+G + +E T S++ A L
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 409 VV---EMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL--ISWNTI 462
+ + VH + + L + V + SLI Y + G I A +F K + WN I
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPN 490
I G ++G + L+ F + + + P+
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPD 343
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 6/310 (1%)
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP-- 486
NSL+ A RNG +++A + F +P ++SW T+I+GF G + L F ++
Sbjct: 156 NSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERA 215
Query: 487 -LKPN--AYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLD 543
+ PN + GKQ+HGY++ +LG AL+ MY K G L+
Sbjct: 216 VITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLE 275
Query: 544 GSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
+L +F+ + + +WNA+ISA A +G+ K+A+ FE M+ S + P+ T +L+AC
Sbjct: 276 MALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMK-SSYVHPNGITLLAILTAC 334
Query: 604 SHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNI 663
+ LVD G ++F + + Y +P+ +H+ C+VDL+GR+G L +A I+ F ++++
Sbjct: 335 ARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASV 394
Query: 664 CWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
+L AC H N LG V + L+ + YV LS A W EA +R M E
Sbjct: 395 LGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIE 454
Query: 724 FGTTKQPGCS 733
G K P S
Sbjct: 455 AGIRKIPAYS 464
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 138/290 (47%), Gaps = 15/290 (5%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N L+ + + ++ SL LFT + +SH ++P++ T + I A+ ++ + ++G LH
Sbjct: 55 NTLIRSYLTTGEYKTSLALFTHMLASH-VQPNNLTFPSLIKAACSS----FSVSYGVALH 109
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
A++ G V S + Y + DL S + F +I P + ++L A R G +
Sbjct: 110 GQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMD 169
Query: 144 DALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDM---QKIGVRPDGYTFTSM 200
A + F +MP ++V W +I H A +F +M ++ + P+ TF S+
Sbjct: 170 YAFEYFQRMP-VTDVVSWTTVINGFSKKGLHAK-ALMVFGEMIQNERAVITPNEATFVSV 227
Query: 201 LSLCS---VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG 257
LS C+ + G+ +H V+ + T++ +L+ MY G + A +F ++
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD- 286
Query: 258 LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
+ +NA+I L R + A MF M+ + P T ++++++C+
Sbjct: 287 -KKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 132/299 (44%), Gaps = 39/299 (13%)
Query: 160 VWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML-SLCSVELLDFGRHVHSV 218
V+N +I R G + LF M V+P+ TF S++ + CS + +G +H
Sbjct: 53 VYNTLI-RSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQ 111
Query: 219 VIRSGFLARTSVVNSLITMYFNCG---------------CVV------DAYQVFGEVEAG 257
++ GFL V S + Y G CVV DA GE++
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 258 LR--------DHVTYNAMIDGLVRVDRNEDAFVMFRDM---QKACFSPMEATFVSVMSSC 306
D V++ +I+G + + A ++F +M ++A +P EATFVSV+SSC
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 307 SS-----LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS 361
++ +R+G Q + T + A + MY G + A IF+++ ++ + +
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKI 420
WN +IS + A+ + M+ + P+ T ++L A ++V++ L S I
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 43/276 (15%)
Query: 259 RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM-SSCSSLRV--GCQA 315
+ YN +I + + + +F M + P TF S++ ++CSS V G
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIF------------------------ 351
Q++K GF V + + Y G + ++ +F
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 352 -------ERMEERDLVSWNIMISMFFQENLNETAILTYLKM---RRVGIEPDEFTYGSLL 401
+RM D+VSW +I+ F ++ L+ A++ + +M R I P+E T+ S+L
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 402 GA-----SDSLQVVEMVHS-LLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKS 455
+ +++ + +H ++SK ++ + +L+ Y + G + AL IF + K
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 456 LISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
+ +WN IIS +NG P Q LE F + ++ + PN
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNG 324
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 117/285 (41%), Gaps = 43/285 (15%)
Query: 453 YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQ 512
+K+ +NT+I +LT G L F+ +L + ++PN +G
Sbjct: 48 WKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVA 107
Query: 513 VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQ 572
+HG L+ GF + + + V Y + G L+ S +F+ ++ ++ N+L+ A ++G+
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 573 GKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHF 632
A F+ M ++ D ++T V++ S GL +F M+
Sbjct: 168 MDYAFEYFQRMPVT-----DVVSWTTVINGFSKKGLHAKALMVFGEMI------------ 210
Query: 633 SCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACA--AHGNLRLGRMVARLLLEK 690
+ ER + N S+ S+CA G +RLG+ + ++ K
Sbjct: 211 --------------QNERAV----ITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSK 252
Query: 691 D-HNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
+ ++ L ++ AG E A + D +R+ + C+W
Sbjct: 253 EIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD-----KKVCAW 292
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 161/309 (52%), Gaps = 5/309 (1%)
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN-TP 486
+N +I + + G A ++ N +++I+WN +I G++ N + L+ +L+ T
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSL 546
+KPN + H K VH ++ G L +ALV +YAKCG + S
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 547 GVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
VF ++ + D WNA+I+ +A HG EA+ F M+ + + PD TF +L+ CSH
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME-AEHVSPDSITFLGLLTTCSHC 279
Query: 607 GLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWS 666
GL+++G F +M + P ++H+ +VDLLGR+G ++EA LI+ + I S
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 667 LFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGT 726
L S+ + N LG + + L + + YVLLSNI ++ +WE A +R++M + G
Sbjct: 340 LLSSSRTYKNPELGEIAIQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 727 TKQPGCSWI 735
K G SW+
Sbjct: 397 RKAKGKSWL 405
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 140/308 (45%), Gaps = 24/308 (7%)
Query: 132 MLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR 191
++ + ++G G A K+ ++ NV WN +I + +++ L + ++
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQ-NVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIK 162
Query: 192 PDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
P+ ++F S L+ C+ + L + VHS++I SG + ++L+ +Y CG + + +V
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 251 FGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR 310
F V+ D +NAMI G +A +F +M+ SP TF+ ++++CS
Sbjct: 223 FYSVKRN--DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 311 V--------GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME-ERDLVS 361
+ G ++ SI+ + Y A+ + + G+V EA + E M E D+V
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAM----VDLLGRAGRVKEAYELIESMPIEPDVVI 336
Query: 362 WNIMIS---MFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLS 418
W ++S + L E AI K + D ++ ++ + + V L+S
Sbjct: 337 WRSLLSSSRTYKNPELGEIAIQNLSKAK----SGDYVLLSNIYSSTKKWESAQKVRELMS 392
Query: 419 KIGLMKVE 426
K G+ K +
Sbjct: 393 KEGIRKAK 400
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 20/229 (8%)
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKAC-FSPMEATFVSVMSSCSSLRVGCQAQAQ-- 318
+T+N MI G VR + E+A ++M P + +F S +++C+ R+G A+
Sbjct: 130 ITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA--RLGDLHHAKWV 187
Query: 319 ---SIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLN 375
I +G + +++A + +Y+ G + ++ +F ++ D+ WN MI+ F L
Sbjct: 188 HSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLA 247
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM--------KVEV 427
AI + +M + PD T+ LL ++E GLM K+E
Sbjct: 248 TEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF---GLMSRRFSIQPKLEH 304
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYK-SLISWNTIISGFLTNGCPLQG 475
+++ R GR+ A ++ ++P + ++ W +++S T P G
Sbjct: 305 YGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELG 353
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 133/356 (37%), Gaps = 96/356 (26%)
Query: 16 SSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATA 75
S + ++ N ++ R+ Q+ E+LK + S ++P+ ++ ++++ A A A
Sbjct: 125 SDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHA 184
Query: 76 TTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSA 135
+H+ I +G++ ++ ++++L+ +YAK D+ + F ++ D W M++
Sbjct: 185 ----KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITG 240
Query: 136 STRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
G +A+++F +M V PD
Sbjct: 241 FATHGLATEAIRVFSEMEAEH---------------------------------VSPDSI 267
Query: 196 TFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG--- 252
TF +L+ CS +CG + + + FG
Sbjct: 268 TFLGLLTTCS----------------------------------HCGLLEEGKEYFGLMS 293
Query: 253 ---EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
++ L +H Y AM+D L R R ++A+ + M P+E V S SS
Sbjct: 294 RRFSIQPKL-EH--YGAMVDLLGRAGRVKEAYELIESM------PIEPDVVIWRSLLSSS 344
Query: 310 RVGCQAQAQSI------KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL 359
R + I K Y ++N +YS K AQ + E M + +
Sbjct: 345 RTYKNPELGEIAIQNLSKAKSGDYVLLSN----IYSSTKKWESAQKVRELMSKEGI 396
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 213/486 (43%), Gaps = 44/486 (9%)
Query: 209 LDFGRHVHSVVIRSGFLARTSVV--NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNA 266
+ GR +H+ R G V L++MY CGC+ DA +VF + R+ T++A
Sbjct: 97 IHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRE--RNLFTWSA 151
Query: 267 MIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSS---LRVGCQAQAQSIKTG 323
MI R +R + +FR M K P + F ++ C++ + G + IK G
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLG 211
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
+ V+N+ + +Y+ G+++ A F RM ERD+++WN ++ + Q +E A+
Sbjct: 212 MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 384 KMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINW 443
+M + GI P T+ L+G + L + L+ K+ +
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA---------------- 315
Query: 444 ALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXX 503
+ +W +ISG + NG Q L+ F + + PNA
Sbjct: 316 -----------DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 504 XXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNAL 563
G +VH ++ GF ++ +GN+LV MY+KCG L+ + VF+++ +D +WN++
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSM 424
Query: 564 ISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIY 623
I+ Y Q G +A F MQ + P+ T+ ++S G + +F M
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQ-DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 624 GFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFG---ANSNICWSLFSACAAHGNLRLG 680
+ ++ I+ ++G +EA L + F NS SL ACA NL
Sbjct: 484 KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA---NLLGA 540
Query: 681 RMVARL 686
+MV +
Sbjct: 541 KMVREI 546
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 152/624 (24%), Positives = 266/624 (42%), Gaps = 92/624 (14%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
++ +R N+ E KLF + L PD + + AN G +H+
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDGVL-PDDFLFPKILQGCANCGDVEA----GKVIHSV 206
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDA 145
I+ G+ + V+NS+L++YAK +L + F + D +W ++L A + G +A
Sbjct: 207 VIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEA 266
Query: 146 LKLFDQMPNRS---NVAVWNAII------TRCGA-------------------------- 170
++L +M + WN +I +C A
Sbjct: 267 VELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISG 326
Query: 171 --DNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLAR 227
NG A D+FR M GV P+ T S +S CS +++++ G VHS+ ++ GF+
Sbjct: 327 LIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDD 386
Query: 228 TSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
V NSL+ MY CG + DA +VF V+ +D T+N+MI G + A+ +F M
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSVKN--KDVYTWNSMITGYCQAGYCGKAYELFTRM 444
Query: 288 QKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
Q A P T+ N ++ Y G EA
Sbjct: 445 QDANLRPNIITW--------------------------------NTMISGYIKNGDEGEA 472
Query: 348 QNIFERME-----ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
++F+RME +R+ +WN++I+ + Q + A+ + KM+ P+ T SLL
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 403 ASDSL---QVVEMVHSLLSKIGLMKVE-VLNSLIAAYCRNGRINWALQIFSNLPYKSLIS 458
A +L ++V +H + + L + V N+L Y ++G I ++ IF + K +I+
Sbjct: 533 ACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIIT 592
Query: 459 WNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYIL 518
WN++I G++ +G L F+ + + PN GK+V I
Sbjct: 593 WNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIA 652
Query: 519 R-HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEA 576
+ + +A+V +Y + L+ +L M ++ +T W + ++ HG A
Sbjct: 653 NDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMA 712
Query: 577 VCCFEAMQISPGIEPDH-ATFTIV 599
+ E + +EP++ AT +IV
Sbjct: 713 IHAAENLF---SLEPENTATESIV 733
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 134/545 (24%), Positives = 234/545 (42%), Gaps = 122/545 (22%)
Query: 78 FGNQLHAHAIRTGL--KAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSA 135
G LHA R GL + V LLS+YAK +A + F + + ++W+ M+ A
Sbjct: 99 LGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGA 155
Query: 136 STRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
+R NR W + LFR M K GV PD +
Sbjct: 156 YSR--------------ENR-----WREVAK--------------LFRLMMKDGVLPDDF 182
Query: 196 TFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV 254
F +L C+ ++ G+ +HSVVI+ G + V NS++ +Y CG + A + F +
Sbjct: 183 LFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM 242
Query: 255 EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQ 314
RD + +N+++ + ++E+A + ++M+K SP T+
Sbjct: 243 RE--RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW--------------- 285
Query: 315 AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME----ERDLVSWNIMISMFF 370
N + Y+ GK + A ++ ++ME D+ +W MIS
Sbjct: 286 -----------------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLI 328
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEM---VHSLLSKIGLM-KVE 426
+ A+ + KM G+ P+ T S + A L+V+ VHS+ K+G + V
Sbjct: 329 HNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVL 388
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
V NSL+ Y + G++ A ++F ++ K + +WN++I+G+ G + E F+ + +
Sbjct: 389 VGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDAN 448
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSL 546
L+PN I N +++ Y K G ++
Sbjct: 449 LRPN-----------------------------------IITWNTMISGYIKNGDEGEAM 473
Query: 547 GVFNAM-----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLS 601
+F M V+R+T +WN +I+ Y Q+G+ EA+ F MQ S + P+ T +L
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM-PNSVTILSLLP 532
Query: 602 ACSHV 606
AC+++
Sbjct: 533 ACANL 537
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 148/335 (44%), Gaps = 47/335 (14%)
Query: 8 RQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASA 67
++M T I+++ + +++ L + ++L +F ++ + + P+ T+ +A++A +
Sbjct: 306 QKMETFGITAD-VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV-PNAVTIMSAVSACS 363
Query: 68 NTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDY 127
+ G+++H+ A++ G V NSL+ +Y+K L + F ++ D Y
Sbjct: 364 CLK----VINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY 419
Query: 128 SWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIIT----------------RC 168
+W +M++ + G+ G A +LF +M + R N+ WN +I+ R
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 169 GAD-------------------NGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVEL- 208
D NG D A +LFR MQ P+ T S+L C+ L
Sbjct: 480 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLG 539
Query: 209 LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMI 268
R +H V+R A +V N+L Y G + + +F +E +D +T+N++I
Sbjct: 540 AKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET--KDIITWNSLI 597
Query: 269 DGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM 303
G V A +F M+ +P T S++
Sbjct: 598 GGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 132/283 (46%), Gaps = 8/283 (2%)
Query: 396 TYGSLLGA---SDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLP 452
TY LL + S S+ + ++H+ V V L++ Y + G I A ++F ++
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR 142
Query: 453 YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQ 512
++L +W+ +I + + + F ++ + P+ + GK
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 513 VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQ 572
+H +++ G SS + + N+++ +YAKCG LD + F M +RD I+WN+++ AY Q+G+
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 573 GKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHF 632
+EAV + M+ GI P T+ I++ + +G D + M +G V +
Sbjct: 263 HEEAVELVKEME-KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTW 320
Query: 633 SCIVDLLGRSGYLEEAERLIKGGYFGA---NSNICWSLFSACA 672
+ ++ L +G +A + + + N+ S SAC+
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS 363
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 151/612 (24%), Positives = 254/612 (41%), Gaps = 129/612 (21%)
Query: 72 AATATTFG--NQLHAHAIR-TGLKAHSHVANSLLSLYAKAEDLASVER-AFAEIEYPDDY 127
A+ A TF NQ+HA I L S+ A+ ++S + + R F + +P+ +
Sbjct: 13 ASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVF 72
Query: 128 SWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK 187
+M +++ D L+L++Q +RCG
Sbjct: 73 VVNSMFKYFSKMDMANDVLRLYEQR-------------SRCG------------------ 101
Query: 188 IGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA 247
+ PD ++F ++ FG ++V + GF V N ++ MY V A
Sbjct: 102 --IMPDAFSFPVVIKSAG----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESA 155
Query: 248 YQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCS 307
+VF ++ R +N MI G + E+A +F DM E VS
Sbjct: 156 RKVFDQISQ--RKGSDWNVMISGYWKWGNKEEACKLF-DMMP------ENDVVS------ 200
Query: 308 SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQN---IFERMEERDLVSWNI 364
M + F KV + +N F+RM E+ +VSWN
Sbjct: 201 --------------------------WTVMITGFAKVKDLENARKYFDRMPEKSVVSWNA 234
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMK 424
M+S + Q E A+ + M R+G+ P+E T+ ++ A + SL+ I +
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 425 VEV------------------------------------LNSLIAAYCRNGRINWALQIF 448
V + N++I+ Y R G ++ A Q+F
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 449 SNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNT-PLKPNAYXXXXXXXXXXXXXXX 507
+P ++++SWN++I+G+ NG +E F +++ KP+
Sbjct: 355 DTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 508 XHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAY 567
G + YI ++ S +L+ MYA+ G+L + VF+ M +RD +S+N L +A+
Sbjct: 415 ELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAF 474
Query: 568 AQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVP 627
A +G G E + M+ GIEPD T+T VL+AC+ GL+ +G RIF + N P
Sbjct: 475 AANGDGVETLNLLSKMK-DEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----P 528
Query: 628 SVDHFSCIVDLL 639
DH++C+ DLL
Sbjct: 529 LADHYACM-DLL 539
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 190/461 (41%), Gaps = 88/461 (19%)
Query: 14 TISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAA 73
+++ + +N + ++ + + L+L+ Q S + PD ++ I
Sbjct: 65 SVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQ-RSRCGIMPDAFSFPVVIK--------- 114
Query: 74 TATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTML 133
+A FG A + G +V N ++ +Y K E + S + F +I W M+
Sbjct: 115 SAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 134 SASTRLGHVGDALKLFDQMPN------------------------------RSNVAVWNA 163
S + G+ +A KLFD MP +V WNA
Sbjct: 175 SGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNA 234
Query: 164 IITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVEL-LDFGRHVHSVVIRS 222
+++ A NG + A LF DM ++GVRP+ T+ ++S CS R + ++
Sbjct: 235 MLS-GYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEK 293
Query: 223 GFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFV 282
V +L+ M+ C + A ++F E+ R+ VT+NAMI G R+ A
Sbjct: 294 RVRLNCFVKTALLDMHAKCRDIQSARRIFNEL-GTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 283 MFRDMQKACF--------------------------------SPMEATFVSVMSSC---S 307
+F M K P E T +SV+S+C +
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 308 SLRVG-C---QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
L +G C + IK Y ++ + MY+ G + EA+ +F+ M+ERD+VS+N
Sbjct: 413 DLELGDCIVDYIRKNQIKLNDSGYRSL----IFMYARGGNLWEAKRVFDEMKERDVVSYN 468
Query: 364 IMISMFFQENLNETAILTYL-KMRRVGIEPDEFTYGSLLGA 403
+ + F N + L L KM+ GIEPD TY S+L A
Sbjct: 469 TLFTA-FAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 205/491 (41%), Gaps = 46/491 (9%)
Query: 260 DHVTY------NAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC 313
D VT+ N+M ++D D ++ + P +F V+ S R G
Sbjct: 64 DSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG--RFGI 121
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQEN 373
QA K GF V N M MY V A+ +F+++ +R WN+MIS +++
Sbjct: 122 LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWG 181
Query: 374 LNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIA 433
E A + M E D ++ ++ ++ +E ++ V N++++
Sbjct: 182 NKEEACKLFDMMP----ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLS 237
Query: 434 AYCRNGRINWALQIFSNL------PYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
Y +NG AL++F+++ P ++ +W +IS P + +
Sbjct: 238 GYAQNGFTEDALRLFNDMLRLGVRPNET--TWVIVISACSFRADPSLTRSLVKLIDEKRV 295
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
+ N + +++ + G + NA+++ Y + G + +
Sbjct: 296 RLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 548 VFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVG 607
+F+ M KR+ +SWN+LI+ YA +GQ A+ FE M +PD T VLSAC H+
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 608 LVDDGTRIFDMM------VNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANS 661
++ G I D + +N G + ++ + R G L EA+R+
Sbjct: 413 DLELGDCIVDYIRKNQIKLNDSG-------YRSLIFMYARGGNLWEAKRVFDE--MKERD 463
Query: 662 NICW-SLFSACAAHGN-LRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRD 719
+ + +LF+A AA+G+ + +++++ E + Y + C AG L++
Sbjct: 464 VVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGL------LKE 517
Query: 720 MMREFGTTKQP 730
R F + + P
Sbjct: 518 GQRIFKSIRNP 528
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 155/312 (49%), Gaps = 6/312 (1%)
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLN-TPL 487
N +I G AL +P ++++SW TII G+ P + + FS ++ +
Sbjct: 193 NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI 252
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF-SSEISLGNALVTMYAKCGSLDGSL 546
KPN VH Y+ + GF +I + N+L+ YAKCG + +
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF 312
Query: 547 GVFNAMV--KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
F + +++ +SW +ISA+A HG GKEAV F+ M+ G++P+ T VL+ACS
Sbjct: 313 KFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDME-RLGLKPNRVTMISVLNACS 371
Query: 605 HVGLVDDG-TRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNI 663
H GL ++ F+ MVN Y P V H+ C+VD+L R G LEEAE++ + +
Sbjct: 372 HGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVV 431
Query: 664 CWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMRE 723
L AC+ + + L V R L+E + ++ YVL+SNI G++ +A R M
Sbjct: 432 WRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDV 491
Query: 724 FGTTKQPGCSWI 735
G K PG S +
Sbjct: 492 RGVAKLPGHSQV 503
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 174/393 (44%), Gaps = 26/393 (6%)
Query: 16 SSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSH-------TLRP-DHYTLSTAITASA 67
+S ++ N LL + + L+ Q+ H +L P D +T + AS+
Sbjct: 73 NSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASS 132
Query: 68 NTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDY 127
N P + G LH ++ G ++H +V +L+ +Y ++ + F E+ +
Sbjct: 133 N--PRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPV 190
Query: 128 SWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQK 187
+W M++ T LG AL ++MPNR+ V+ W II + + R +
Sbjct: 191 TWNVMITGLTNLGDFEKALCFLEKMPNRTVVS-WTTIIDGYARVDKPKEAILLFSRMVAC 249
Query: 188 IGVRPDGYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLA-RTSVVNSLITMYFNCGCVV 245
++P+ T ++L ++ ++ L VH+ V + GF+ V NSLI Y CGC+
Sbjct: 250 DAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQ 309
Query: 246 DAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS 305
A++ F E+ G ++ V++ MI ++A MF+DM++ P T +SV+++
Sbjct: 310 SAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNA 369
Query: 306 CSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCF-------GKVNEAQNI-FERMEER 357
CS + + + T + Y + + Y C G++ EA+ I E E
Sbjct: 370 CSHGGLAEEEFLEFFNTMVNEYKITPD--VKHYGCLVDMLRRKGRLEEAEKIALEIPIEE 427
Query: 358 DLVSWNIMI---SMFFQENLNETAILTYLKMRR 387
V W +++ S++ L E +++ R
Sbjct: 428 KAVVWRMLLGACSVYDDAELAERVTRKLMELER 460
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 49/289 (16%)
Query: 221 RSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMI------------ 268
+ GF + V +L+ MY G ++DA++VF E+ R+ VT+N MI
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPE--RNPVTWNVMITGLTNLGDFEKA 208
Query: 269 -------------------DGLVRVDRNEDAFVMFRDMQKAC--FSPMEATFVSVMSSC- 306
DG RVD+ ++A ++F M AC P E T ++++ +
Sbjct: 209 LCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMV-ACDAIKPNEITILAILPAVW 267
Query: 307 --SSLRVGCQAQAQSIKTGF-DAYTAVNNATMTMYSCFGKVNEAQNIFERME--ERDLVS 361
L++ A K GF V N+ + Y+ G + A F + ++LVS
Sbjct: 268 NLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVS 327
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASD-----SLQVVEMVHSL 416
W MIS F + + A+ + M R+G++P+ T S+L A + +E +++
Sbjct: 328 WTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Query: 417 LSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPY-KSLISWNTII 463
+++ + V+ L+ R GR+ A +I +P + + W ++
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 46/254 (18%)
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALIS--------------- 565
GF S + + ALV MY G++ + VF+ M +R+ ++WN +I+
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 566 ----------------AYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLV 609
YA+ + KEA+ F M I+P+ T +L A ++G +
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 610 DDGTRIFDMMVNIYGFVP-SVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICW-SL 667
+ V GFVP + + ++D + G ++ A + G + + W ++
Sbjct: 273 KMCGSV-HAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 331
Query: 668 FSACAAHGNLRLGRMVARLL--LEKDHNNPSVYVLLS--NICAAAGQWEEA--ANLRDMM 721
SA A HG +G+ + +E+ P+ ++S N C+ G EE M+
Sbjct: 332 ISAFAIHG---MGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMV 388
Query: 722 REFGTT---KQPGC 732
E+ T K GC
Sbjct: 389 NEYKITPDVKHYGC 402
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 194/440 (44%), Gaps = 54/440 (12%)
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
T+++Y GK+ A +F+ + + + A+ Y + R G PD
Sbjct: 73 TVSIYRSIGKLYCANPVFK---------------AYLVSSSPKQALGFYFDILRFGFVPD 117
Query: 394 EFTYGSLL----------------------GASDSLQV-------------VEMVHSLLS 418
+T+ SL+ G L V +++ L
Sbjct: 118 SYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFV 177
Query: 419 KIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQ 478
+I + NS+IA RNG + A ++F +P K++ISWN +IS +L P +
Sbjct: 178 EIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISL 237
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK 538
F ++ + N G+ VH ++R +S + + AL+ MY K
Sbjct: 238 FREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGK 297
Query: 539 CGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTI 598
C + + +F+++ R+ ++WN +I A+ HG+ + + FEAM I+ + PD TF
Sbjct: 298 CKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM-INGMLRPDEVTFVG 356
Query: 599 VLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKG---G 655
VL C+ GLV G + +MV+ + P+ H C+ +L +G+ EEAE +K
Sbjct: 357 VLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDE 416
Query: 656 YFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAA 715
S +L S+ GN LG +A+ L+E D N Y LL NI + G+WE+
Sbjct: 417 DVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVN 476
Query: 716 NLRDMMREFGTTKQPGCSWI 735
+R+M++E + PGC +
Sbjct: 477 RVREMVKERKIGRIPGCGLV 496
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 148/319 (46%), Gaps = 29/319 (9%)
Query: 54 PDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLAS 113
PD YT + I+ T G H AI+ G V NSL+ +Y L
Sbjct: 116 PDSYTFVSLISCIEKT----CCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDL 171
Query: 114 VERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITR-CGADN 172
++ F EI D SW ++++ R G V A KLFD+MP++ N+ WN +I+ GA+N
Sbjct: 172 AKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDK-NIISWNIMISAYLGANN 230
Query: 173 GHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVV 231
V+ LFR+M + G + + T +L+ C L GR VH+ +IR+ FL + V+
Sbjct: 231 --PGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRT-FLNSSVVI 287
Query: 232 NS-LITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
++ LI MY C V A ++F + +R+ VT+N MI R E +F M
Sbjct: 288 DTALIDMYGKCKEVGLARRIFDSLS--IRNKVTWNVMILAHCLHGRPEGGLELFEAMING 345
Query: 291 CFSPMEATFVSVMSSCSSLRVGCQAQAQS----------IKTGFDAYTAVNNATMTMYSC 340
P E TFV V+ C+ R G +Q QS IK F + N +YS
Sbjct: 346 MLRPDEVTFVGVLCGCA--RAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN----LYSS 399
Query: 341 FGKVNEAQNIFERMEERDL 359
G EA+ + + + D+
Sbjct: 400 AGFPEEAEEALKNLPDEDV 418
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 43/262 (16%)
Query: 178 AFDLFRDMQKIGVRPDGYTFTSMLSL----CSVELLDFGRHVHSVVIRSGFLARTSVVNS 233
A + D+ + G PD YTF S++S C V D G+ H I+ G V NS
Sbjct: 102 ALGFYFDILRFGFVPDSYTFVSLISCIEKTCCV---DSGKMCHGQAIKHGCDQVLPVQNS 158
Query: 234 LITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVR----------VDRNEDAFV- 282
L+ MY CG + A ++F VE RD V++N++I G+VR D D +
Sbjct: 159 LMHMYTCCGALDLAKKLF--VEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 283 --------------------MFRDMQKACFSPMEATFVSVMSSC---SSLRVGCQAQAQS 319
+FR+M +A F E+T V ++++C + L+ G A
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAI 379
I+T ++ ++ A + MY +V A+ IF+ + R+ V+WN+MI E +
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 380 LTYLKMRRVGIEPDEFTYGSLL 401
+ M + PDE T+ +L
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVL 358
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 12/221 (5%)
Query: 431 LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
L+ + R G ++ + I+ ++ L N + +L + P Q L + +L P+
Sbjct: 60 LLKSSSRFGDSSYTVSIYRSI--GKLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPD 117
Query: 491 AYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFN 550
+Y GK HG ++HG + + N+L+ MY CG+LD + +F
Sbjct: 118 SYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFV 177
Query: 551 AMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVD 610
+ KRD +SWN++I+ ++G A F+ M PD + + +++G +
Sbjct: 178 EIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEM-------PDKNIISWNIMISAYLGANN 230
Query: 611 DGTRI--FDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
G I F MV GF + +++ GRS L+E
Sbjct: 231 PGVSISLFREMVRA-GFQGNESTLVLLLNACGRSARLKEGR 270
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 192/397 (48%), Gaps = 39/397 (9%)
Query: 293 SPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFE 352
SP + F+ S+ S L+ Q + IK + +++ S FG+ A +F
Sbjct: 20 SPEASYFLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFN 76
Query: 353 RMEERDLVSWNIMI-SMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQ 408
+++ +WN+MI S+ E +L L M + D+FT+ ++ A S S++
Sbjct: 77 QLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIR 136
Query: 409 VVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFL 467
+ VH L K G V N+L+ Y + G+ + ++F +P +S++SW T++ G +
Sbjct: 137 LGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLV 196
Query: 468 TNG-----------CPLQGLEQFSALLNT--------------------PLKPNAYXXXX 496
+N P++ + ++A++ +KPN +
Sbjct: 197 SNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVN 256
Query: 497 XXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRD 556
G+ VH Y ++GF + LG AL+ MY+KCGSL + VF+ M +
Sbjct: 257 LLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS 316
Query: 557 TISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIF 616
+WN++I++ HG G+EA+ FE M+ +EPD TF VLSAC++ G V DG R F
Sbjct: 317 LATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYF 376
Query: 617 DMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
M+ +YG P +H +C++ LL ++ +E+A L++
Sbjct: 377 TRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVE 413
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 165/348 (47%), Gaps = 16/348 (4%)
Query: 15 ISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAAT 74
+ S N ++ +L+ +++ E+L LF + SH + D +T I A A++
Sbjct: 78 LQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACL----ASS 133
Query: 75 ATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLS 134
+ G Q+H AI+ G N+L+ LY K S + F ++ SWTTML
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 135 ASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
+ A +F+QMP R NV W A+IT N D AF LFR MQ V+P+
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMR-NVVSWTAMIT-AYVKNRRPDEAFQLFRRMQVDDVKPNE 251
Query: 195 YTFTSMLSLCSVEL--LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
+T ++L S +L L GR VH ++GF+ + +LI MY CG + DA +VF
Sbjct: 252 FTIVNLLQ-ASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFD 310
Query: 253 EVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMF-RDMQKACFSPMEATFVSVMSSCS---S 308
++ + T+N+MI L E+A +F ++A P TFV V+S+C+ +
Sbjct: 311 VMQG--KSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGN 368
Query: 309 LRVGCQAQAQSIKT-GFDAYTAVNNATMTMYSCFGKVNEAQNIFERME 355
++ G + + I+ G N + + +V +A N+ E M+
Sbjct: 369 VKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMD 416
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 195/409 (47%), Gaps = 19/409 (4%)
Query: 339 SCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYG 398
S FG ++ A IF + + WN +I F + A Y M +
Sbjct: 48 SPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV 107
Query: 399 SLLGASDSLQV---------VEMVHSLLSKIGLMKVEVL-NSLIAAYCRNGRINWALQIF 448
L S +L+ ++ +H +++ GL +L +L+ AY +NG + A ++F
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 449 SNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXX 508
+P + + SWN +I+G ++ + +E + + ++ +
Sbjct: 168 DEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK 227
Query: 509 HGKQVHGYILRHGFSSE-ISLGNALVTMYAKCGSLDGSLGVFNAMV-KRDTISWNALISA 566
G+ + HG+S++ + + NA + MY+KCG +D + VF K+ ++WN +I+
Sbjct: 228 EGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
+A HG+ A+ F+ ++ GI+PD ++ L+AC H GLV+ G +F+ M G
Sbjct: 283 FAVHGEAHRALEIFDKLE-DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVE 340
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARL 686
++ H+ C+VDLL R+G L EA +I + + SL A + ++ + + +R
Sbjct: 341 RNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASRE 400
Query: 687 LLEKDHNNPSVYVLLSNICAAAGQWEEAANLRDMMREFGTTKQPGCSWI 735
+ E NN +VLLSN+ AA G+W++ +RD M K PG S+I
Sbjct: 401 IKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYI 449
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 147/365 (40%), Gaps = 23/365 (6%)
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVR 273
H S +RS L R ++ + + F A Q+F + L + +NA+I G
Sbjct: 31 HFQSSFLRSRLLERCAI-SPFGDLSF-------AVQIFRYIPKPLTN--DWNAIIRGFAG 80
Query: 274 VDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC----------QAQAQSIKTG 323
AF +R M + S V ++ CS C Q Q + G
Sbjct: 81 SSHPSLAFSWYRSMLQQSSSSSAICRVDALT-CSFTLKACARALCSSAMDQLHCQINRRG 139
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYL 383
A + + + YS G + A +F+ M RD+ SWN +I+ N A+ Y
Sbjct: 140 LSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYK 199
Query: 384 KMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINW 443
+M GI E T + LGA L V+ ++ V V N+ I Y + G ++
Sbjct: 200 RMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDK 259
Query: 444 ALQIFSNLP-YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXX 502
A Q+F KS+++WNT+I+GF +G + LE F L + +KP+
Sbjct: 260 AYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACR 319
Query: 503 XXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWN 561
+G V + G + +V + ++ G L + + +M + D + W
Sbjct: 320 HAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQ 379
Query: 562 ALISA 566
+L+ A
Sbjct: 380 SLLGA 384
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 147/374 (39%), Gaps = 74/374 (19%)
Query: 53 RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLA 112
R D T S + A A A ++ +QLH R GL A S + +LL Y+K DL
Sbjct: 106 RVDALTCSFTLKACAR----ALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLI 161
Query: 113 SVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADN 172
S A KLFD+MP R +VA WNA+I + N
Sbjct: 162 S-------------------------------AYKLFDEMPVR-DVASWNALIAGLVSGN 189
Query: 173 GHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVV- 231
+ A +L++ M+ G+R T + L CS G I G+ +V
Sbjct: 190 RASE-AMELYKRMETEGIRRSEVTVVAALGACS----HLGDVKEGENIFHGYSNDNVIVS 244
Query: 232 NSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKAC 291
N+ I MY CG V AYQVF E G + VT+N MI G A +F ++
Sbjct: 245 NAAIDMYSKCGFVDKAYQVF-EQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG 303
Query: 292 FSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIF 351
P + ++++ +++C A ++ G + NN +C G
Sbjct: 304 IKPDDVSYLAALTACR--------HAGLVEYGLSVF---NNM-----ACKGV-------- 339
Query: 352 ERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVE 411
ER++ + ++ + + A M + PD + SLLGAS+ VE
Sbjct: 340 ----ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMI---PDPVLWQSLLGASEIYSDVE 392
Query: 412 MVHSLLSKIGLMKV 425
M +I M V
Sbjct: 393 MAEIASREIKEMGV 406
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 188/404 (46%), Gaps = 28/404 (6%)
Query: 93 AHSHVANSLLSLYAKA----EDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKL 148
A S N L++ Y +A E +E + P+ ++TT++ A + G +ALKL
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 149 FDQMPNR---SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
F M N +NA+++ G + +++ + DM+ G P+ T+ +ML+LC
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM-IKMLCDMKSNGCSPNRATWNTMLALCG 467
Query: 206 VELLD-FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV-EAGLRDHVT 263
+ +D F V + GF N+LI+ Y CG VDA +++GE+ AG VT
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT 527
Query: 264 -YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQS 319
YNA+++ L R + DM+ F P E ++ S+M C + +G +
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY-SLMLQCYAKGGNYLGIERIENR 586
Query: 320 IKTG--FDAYTAVNNATMTMYSC--FGKVNEAQNIFERMEER-DLVSWNIMISMFFQENL 374
IK G F ++ + + + C A +F++ + D+V +N M+S+F + N+
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 646
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGA----SDSLQVVEMVHSLLSKIGLMKVEVLNS 430
+ A +R G+ PD TY SL+ + + E++ +L + N+
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 706
Query: 431 LIAAYCRNGRINWALQIFSNLPYKS----LISWNTIISGFLTNG 470
+I +CR G + A+++ S + + + ++NT +SG+ G
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/561 (19%), Positives = 233/561 (41%), Gaps = 41/561 (7%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDL 181
D ++TT+L A +R G A+ LF++M + +N I+ G +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 182 FRDMQKIGVRPDGYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFN 240
+M+ G++ D +T +++LS C+ E LL + + + G+ T N+L+ ++
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 241 CGCVVDAYQVFGEVEAG--LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEAT 298
G +A V E+E D VTYN ++ VR +++A + M K P T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 299 FVSVMSSCSSLRVGCQAQAQSI-----KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
+ +V+ + + G + +A + + G T NA +++ + NE +
Sbjct: 389 YTTVIDAYG--KAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 354 MEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL---GASDS 406
M+ + +WN M+++ + +++ + +M+ G EPD T+ +L+ G S
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 407 LQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISG 465
++ +++ G V N+L+ A R G + S++ K T S
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 466 FL---TNGCPLQGLEQFSALLNT-PLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG 521
L G G+E+ + + P+ ++ +HG
Sbjct: 567 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 626
Query: 522 FSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAV 577
+ ++ + N++++++ + D + G+ ++ + D +++N+L+ Y + G+
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGE----- 681
Query: 578 CCFEAMQISPGIE-----PDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHF 632
C++A +I +E PD ++ V+ GL+ + R+ M G P + +
Sbjct: 682 -CWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE-RGIRPCIFTY 739
Query: 633 SCIVDLLGRSGYLEEAERLIK 653
+ V G E E +I+
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIE 760
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 21/290 (7%)
Query: 416 LLSKIGL----MKVEVLNSLIAAYCRNGRINWALQIFSNL----PYKSLISWNTIISGFL 467
LL KI L + V +++ AY R G+ A+ +F + P +L+++N I+ F
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG 256
Query: 468 TNGCPLQG-LEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEI 526
G + L + + LK + + K+ + G+
Sbjct: 257 KMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT 316
Query: 527 SLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEA 582
NAL+ ++ K G +L V M + D++++N L++AY + G KEA E
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE- 375
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRS 642
M G+ P+ T+T V+ A G D+ ++F M G VP+ ++ ++ LLG+
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKK 434
Query: 643 GYLEEAERLI---KGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLE 689
E +++ K N ++ + C GN + + V R+ E
Sbjct: 435 SRSNEMIKMLCDMKSNGCSPNRATWNTMLALC---GNKGMDKFVNRVFRE 481
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 153/382 (40%), Gaps = 41/382 (10%)
Query: 326 AYTAVNNATMTMYSCFGKVNEAQNIFERMEE----RDLVSWNIMISMFFQENLNETAILT 381
AYT + +A YS GK +A ++FERM+E LV++N+++ +F + + IL
Sbjct: 212 AYTTILHA----YSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 382 YL-KMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYC 436
L +MR G++ DEFT ++L A ++ +++ E N+L+ +
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 437 RNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAY 492
+ G AL + + S +++N +++ ++ G + + + PNA
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 493 XXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM 552
GK+ L + + N Y SL G N M
Sbjct: 388 TYTTVIDAYGKA-----GKEDEALKLFYSMKEAGCVPNTCT--YNAVLSLLGKKSRSNEM 440
Query: 553 VK-----------RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLS 601
+K + +WN +++ G K F M+ S G EPD TF ++S
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMK-SCGFEPDRDTFNTLIS 499
Query: 602 ACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI---KGGYFG 658
A G D ++++ M GF V ++ +++ L R G E +I K F
Sbjct: 500 AYGRCGSEVDASKMYGEMTRA-GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 659 ANSNICWSLFSACAAHGNLRLG 680
+ +SL C A G LG
Sbjct: 559 P-TETSYSLMLQCYAKGGNYLG 579
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 22/282 (7%)
Query: 41 KLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANS 100
++F ++ S PD T +T I+A A+ +++ R G A N+
Sbjct: 477 RVFREMKSCG-FEPDRDTFNTLISAYGRCGSEVDAS----KMYGEMTRAGFNACVTTYNA 531
Query: 101 LLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRS 156
LL+ A+ D S E ++++ P + S++ ML + G+ ++ +++
Sbjct: 532 LLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQ 591
Query: 157 NVAVWNAIIT------RCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSV-ELL 209
W + T +C A G + AF LF+ K G +PD F SMLS+ + +
Sbjct: 592 IFPSWMLLRTLLLANFKCRALAGSER-AFTLFK---KHGYKPDMVIFNSMLSIFTRNNMY 647
Query: 210 DFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGL--RDHVTYNAM 267
D + + G NSL+ MY G A ++ +E D V+YN +
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 268 IDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
I G R ++A M +M + P T+ + +S +++
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAM 749
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 104/183 (56%), Gaps = 1/183 (0%)
Query: 509 HGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYA 568
H K+VH + L+ F + L N +++M+ +C S+ + VF+ MV +D SW+ ++ AY+
Sbjct: 254 HSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYS 313
Query: 569 QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPS 628
+G G +A+ FE M G++P+ TF V AC+ VG +++ FD M N +G P
Sbjct: 314 DNGMGDDALHLFEEM-TKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPK 372
Query: 629 VDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLL 688
+H+ ++ +LG+ G+L EAE+ I+ F ++ ++ + HG++ L + L++
Sbjct: 373 TEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMV 432
Query: 689 EKD 691
+ D
Sbjct: 433 DVD 435
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 86/170 (50%), Gaps = 8/170 (4%)
Query: 294 PMEATFVSVMSSCSSLRV---GCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNI 350
P FV + SC++L+ + +++ F +NN ++M+ + +A+ +
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 351 FERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV 410
F+ M ++D+ SW++M+ + + + A+ + +M + G++P+E T+ ++ A ++ +
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 411 E--MVH--SLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKS 455
E +H S+ ++ G+ K E ++ + G + A Q +LP++
Sbjct: 354 EEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEP 403
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 181 LFRDMQKI---GVRPDGYTFTSMLSLCS-VELLDFGRHVHSVVIRSGFLARTSVVNSLIT 236
L++D ++ G PD F + C+ ++ L+ + VH ++S F + N +I+
Sbjct: 220 LYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVIS 279
Query: 237 MYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPME 296
M+ C + DA +VF + +D +++ M+ +DA +F +M K P E
Sbjct: 280 MFGECSSITDAKRVFDHMVD--KDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 297 ATFVSVMSSCSSL 309
TF++V +C+++
Sbjct: 338 ETFLTVFLACATV 350
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 147/714 (20%), Positives = 281/714 (39%), Gaps = 97/714 (13%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N LL +L R E +++ ++ P+ YT + + A NQ
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVC-PNIYTYNKMVNGYCKLGNVEEA----NQYV 241
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYP----DDYSWTTMLSASTRL 139
+ + GL SL+ Y + +DL S + F E+ ++ ++T ++
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 140 GHVGDALKLFDQMPNRS---NVAVWNAII-TRCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
+ +A+ LF +M + V + +I + CG++ + A +L ++M++ G++P+ +
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE--ALNLVKEMEETGIKPNIH 359
Query: 196 TFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV---- 250
T+T ++ SLCS + R + ++ G + N+LI Y G + DA V
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 251 -----------FGEVEAG---------------------LRDHVTYNAMIDGLVRVDRNE 278
+ E+ G L D VTYN++IDG R +
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 279 DAFVMFRDMQKACFSPMEATFVSVMSS-CSSLRV--GCQAQAQSIKTGFDAYTAVNNATM 335
A+ + M P + T+ S++ S C S RV C + G + + A +
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 336 TMYSCFGKVNEAQNIFERMEERDL----VSWNIMISMFFQENLNETAILTYLKMRRVGIE 391
Y GKV+EA + E+M ++ +++N +I + + A L KM ++G++
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 392 P----DEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRI----NW 443
P D LL D +LS + I YCR GR+ +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 444 ALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXX 503
++ N L +++++I G+ G + + +T +P+ +
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH---TFLSLIKH 716
Query: 504 XXXXXHGKQVHGYILRHGFSSEI-SLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTI 558
+GKQ G E+ ++ N + D + + MV+ +
Sbjct: 717 LLEMKYGKQ-------KGSEPELCAMSNMM--------EFDTVVELLEKMVEHSVTPNAK 761
Query: 559 SWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDM 618
S+ LI + G + A F+ MQ + GI P F +LS C + ++ ++ D
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 619 MVNIYGFVPSVDHFSCIVDLLGRSGYLEEA----ERLIKGGYFGANSNICWSLF 668
M+ + G +P ++ ++ L + G E + L++ GY+ + W +
Sbjct: 822 MICV-GHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY--EDELAWKII 872
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 116/545 (21%), Positives = 228/545 (41%), Gaps = 74/545 (13%)
Query: 142 VGDALKLFD-----------QMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGV 190
VGDAL + D ++ + + +N ++ A G D ++ +M + V
Sbjct: 156 VGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSL-ARFGLVDEMKQVYMEMLEDKV 214
Query: 191 RPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQ 249
P+ YT+ M++ C + ++ S ++ +G SLI Y + A++
Sbjct: 215 CPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 250 VFGE--VEAGLRDHVTYNAMIDGLV---RVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
VF E ++ R+ V Y +I GL R+D D FV +D + CF + V + S
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE--CFPTVRTYTVLIKS 332
Query: 305 SCSS------LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERD 358
C S L + + + IK YT + ++ + C K +A+ + +M E+
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS--QC--KFEKARELLGQMLEKG 388
Query: 359 L----VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVE 411
L +++N +I+ + + + E A+ M + P+ TY L+ S+ + +
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG 448
Query: 412 MVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGC 471
+++ +L + L V NSLI CR+G + A ++ S + + L+ + + + C
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 472 PLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNA 531
+ +E+ L ++ + + G + + + A
Sbjct: 509 KSKRVEEACDLFDS-------------------------------LEQKGVNPNVVMYTA 537
Query: 532 LVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISP 587
L+ Y K G +D + + M+ + +++++NALI G+ KEA E M +
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM-VKI 596
Query: 588 GIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEE 647
G++P +T TI++ G D F M++ G P ++ + R G L +
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS-SGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 648 AERLI 652
AE ++
Sbjct: 656 AEDMM 660
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 140/621 (22%), Positives = 253/621 (40%), Gaps = 67/621 (10%)
Query: 174 HDDVAFDLFRDMQKIGVRPDGYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVN 232
H +A +LF DM +G+RPD Y +T ++ SLC ++ L + + + + +G N
Sbjct: 207 HFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYN 266
Query: 233 SLITMYFNCGCVVDAYQVFGEVEAG--LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
LI V +A + ++ D VTY ++ GL +V E M +M
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL 326
Query: 291 CFSPMEA---TFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
FSP EA + V + + + + G V NA + K +EA
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 348 QNIFERMEERDL----VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+ +F+RM + L V+++I+I MF + +TA+ +M G++ + Y SL+
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 404 SDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYK----S 455
+ ++++ K+E SL+ YC G+IN AL+++ + K S
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 456 LISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYX--------------------XX 495
+ ++ T++SG G ++ F+ + +KPN
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISL-------GN---------ALVTMYAKC 539
+ +HG L G +SE + GN L+ + +
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLT-GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 540 GSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHAT 595
G L+ +L V MV+R D + + LI +H K + M G++PD
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH-DRGLKPDDVI 684
Query: 596 FTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKG- 654
+T ++ A S G + I+D+M+N G VP+ ++ +++ L ++G++ EAE L
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMIN-EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 655 -GYFGANSNICWSLFSACAAHGNLRLGRMVA--RLLLEKDHNNPSVYVLLSNICAAAGQW 711
+ + + F G + + + V +L+ N + Y +L G+
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRI 803
Query: 712 EEAANLRDMMREFGTTKQPGC 732
EEA+ L + R G P C
Sbjct: 804 EEASEL--ITRMIGDGVSPDC 822
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 116/534 (21%), Positives = 218/534 (40%), Gaps = 101/534 (18%)
Query: 17 SEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATAT 76
S + N L+ +L + + E+ LF ++ LRP+ T S I TA
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRM-GKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 77 TFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAE----------IEY--- 123
+F ++ + TGLK + NSL++ + K D+++ E AE + Y
Sbjct: 423 SFLGEM----VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 124 --------------------------PDDYSWTTMLSASTRLGHVGDALKLFDQMPN--- 154
P Y++TT+LS R G + DA+KLF++M
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 155 RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML-SLCSVELLDFGR 213
+ N +N +I + G AF+ ++M + G+ PD Y++ ++ LC G+
Sbjct: 539 KPNRVTYNVMIEGY-CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT-----GQ 592
Query: 214 HVHSVVIRSGFLARTSVVNS-----LITMYFNCGCVVDAYQVFGE-VEAGLR-DHVTYNA 266
+ V G +N L+ + G + +A V E V+ G+ D V Y
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 267 MIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDA 326
+IDG ++ + F + ++M P + + S++ + +++ K F
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA--------KSKTGDFKEAFGI 704
Query: 327 YTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQEN-LNETAILTYLKM 385
+ + N C NE V++ +I+ + +NE +L KM
Sbjct: 705 WDLMINE-----GCVP--NE-------------VTYTAVINGLCKAGFVNEAEVLCS-KM 743
Query: 386 RRVGIEPDEFTYGSLL-----GASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGR 440
+ V P++ TYG L G D + VE+ +++L + L N LI +CR GR
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL-LANTATYNMLIRGFCRQGR 802
Query: 441 INWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
I A ++ + + + I++ T+I+ + +E ++++ ++P+
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/438 (20%), Positives = 166/438 (37%), Gaps = 64/438 (14%)
Query: 234 LITMYFNCGCVVDAYQVFGEV--EAGLRDHV-TYNAMIDGLVRVDRNEDAFVMFRDMQKA 290
LI Y V+D VF + + L V T +A++ GLV+ A +F DM
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 291 CFSPMEATFVSVMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
P + V+ S L+ +A+ A TG D N + KV EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 348 QNIFERMEERDL----VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
I + + +DL V++ ++ + E + +M + P E SL+
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 404 SDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSL--- 456
+E +L+ ++ V V N+LI + C+ + + A +F + L
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 457 -ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHG 515
++++ +I F G L +++T LK + Y
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY--------------------- 440
Query: 516 YILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRD----TISWNALISAYAQHG 571
N+L+ + K G + + G M+ + +++ +L+ Y G
Sbjct: 441 --------------NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 572 QGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDH 631
+ +A+ + M GI P TFT +LS GL+ D ++F+ M + P+
Sbjct: 487 KINKALRLYHEMT-GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVT 544
Query: 632 FSCIVDLLGRSGYLEEAE 649
++ +++ GY EE +
Sbjct: 545 YNVMIE-----GYCEEGD 557
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/553 (21%), Positives = 234/553 (42%), Gaps = 35/553 (6%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDL 181
D YS+T+++SA G +A+ +F +M + + +N I+ G + L
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 182 FRDMQKIGVRPDGYTFTSMLSLCSV-ELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFN 240
M+ G+ PD YT+ ++++ C L V + +GF N+L+ +Y
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 241 CGCVVDAYQVFGE-VEAGLRDH-VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEAT 298
+A +V E V G VTYN++I R ++A + M + P T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 299 FVSVMSSCSSLRVGCQAQAQSI-----KTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
+ +++S R G A SI G NA + MY GK E IF+
Sbjct: 387 YTTLLSGFE--RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 354 ME----ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASD---S 406
+ D+V+WN ++++F Q ++ + +M+R G P+ T+ +L+ A S
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 407 LQVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRINWALQIFSNLP----YKSLISWNT 461
+ V+ + G+ + N+++AA R G + ++ + + + +++ +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 462 IISGFLTNGCPLQGLEQFS-ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
++ + NG + + + + + ++P A ++ +
Sbjct: 565 LLHAY-ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQ-GKE 575
GFS +I+ N++V++Y + + + GV + M +R ++N+L+ +++ GK
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 576 AVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCI 635
E + + GI+PD ++ V+ A + D +RIF M N G VP V ++
Sbjct: 684 EEILREIL--AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN-SGIVPDVITYNTF 740
Query: 636 VDLLGRSGYLEEA 648
+ EEA
Sbjct: 741 IGSYAADSMFEEA 753
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 130/278 (46%), Gaps = 22/278 (7%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N +LA L R +S K+ ++ +P+ T + + A AN + + +++
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRC-KPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEY----PDDYSWTTMLSASTRL 139
+ I + + + +L+ + +K + L ERAF+E++ PD + +M+S R
Sbjct: 587 SGVI----EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 642
Query: 140 GHVGDALKLFDQMPNR---SNVAVWNAII---TRCGADNGHDDVAFDLFRDMQKIGVRPD 193
V A + D M R ++A +N+++ +R AD G + ++ R++ G++PD
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR-SADFGKSE---EILREILAKGIKPD 698
Query: 194 GYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
++ +++ + C + + S + SG + N+ I Y +A V
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 253 E-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQ 288
++ G R + TYN+++DG +++R ++A + D++
Sbjct: 759 YMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/552 (21%), Positives = 237/552 (42%), Gaps = 30/552 (5%)
Query: 129 WTTMLSASTRLGHVGDALKLFDQMPN----RSNVAVWNAIITRCGADNGHDDVAFDLFRD 184
+ +++ + G G +L +M N +N ++ + N H VA ++F D
Sbjct: 149 FISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHK-VAANVFYD 207
Query: 185 MQKIGVRPDGYTF-TSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGC 243
M + P +TF M + C+V +D + + + G + + + +LI C
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 244 VVDAYQVFGE--VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
V +A Q+ E + + D T+N +I GL + DR +A M M F+P + T+
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 302 VMSS-CSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER--- 357
+M+ C RV A + N + + G++++A+ + M
Sbjct: 328 LMNGLCKIGRV--DAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 358 --DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHS 415
D+ ++N +I +++E L A+ MR G +P+ ++Y L+ L ++ ++
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 416 LLSKI---GLMKVEV-LNSLIAAYCRNGRINWALQIFSNLPYK----SLISWNTIISGFL 467
+L+++ GL V N LI+A+C+ RI A++IF +P K + ++N++ISG
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 468 TNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEIS 527
L +++ + N +++ ++ G +
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 528 LGNALVTMYAKCGSLDGSLGVFNAMVK----RDTISWNALISAYAQHGQGKEAVCCFEAM 583
N+L+ + G +D + +F M++ IS N LI+ + G +EAV F+
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV-EFQKE 624
Query: 584 QISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSG 643
+ G PD TF +++ G ++DG +F + G P F+ ++ L + G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKL-QAEGIPPDTVTFNTLMSWLCKGG 683
Query: 644 YLEEAERLIKGG 655
++ +A L+ G
Sbjct: 684 FVYDACLLLDEG 695
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 201/489 (41%), Gaps = 65/489 (13%)
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKT 322
+YN +++ LV + ++ A +F DM P TF VM + + V A S+
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA--VNEIDSALSLLR 241
Query: 323 GFDAYTAVNNATM--TMYSCFGKVNEAQNIFERMEERDLVSW--------NIMISMFFQE 372
+ V N+ + T+ K N + +EE L+ ++++ + +
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD 301
Query: 373 NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLI 432
+NE A + + R G PD+ TYG L+ + V+ L +I ++ + N+LI
Sbjct: 302 RINEAAKMVNRMLIR-GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLI 360
Query: 433 AAYCRNGRINWALQIFSNLP-----YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPL 487
+ +GR++ A + S++ + ++N++I G+ G LE + N
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
KPN Y IL GF K G +D +
Sbjct: 421 KPNVYSYT---------------------ILVDGF--------------CKLGKIDEAYN 445
Query: 548 VFNAM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSAC 603
V N M +K +T+ +N LISA+ + + EAV F M G +PD TF ++S
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP-RKGCKPDVYTFNSLISGL 504
Query: 604 SHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGAN--S 661
V + + M++ G V + ++ +++ R G ++EA +L+ F +
Sbjct: 505 CEVDEIKHALWLLRDMIS-EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 662 NICW-SLFSACAAHGNLRLGRMVARLLLEKDH--NNPSVYVLLSNICAAAGQWEEAANLR 718
I + SL G + R + +L H +N S +L++ +C +G EEA +
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC-RSGMVEEAVEFQ 622
Query: 719 DMMREFGTT 727
M G+T
Sbjct: 623 KEMVLRGST 631
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 45/289 (15%)
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFD 180
P+ YS+T ++ +LG + +A + ++M + N +N +I+ ++ + A +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE-AVE 480
Query: 181 LFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYF 239
+FR+M + G +PD YTF S++S LC V+ + + +I G +A T N+LI +
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 240 NCGCVVDAYQVFGEV--EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEA 297
G + +A ++ E+ + D +TYN++I GL R + A +F M + +P
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 298 TFVSVMSSCSSLRVG-CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE 356
SC+ L G C++ G V EA + M
Sbjct: 601 -------SCNILINGLCRS--------------------------GMVEEAVEFQKEMVL 627
Query: 357 R----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL 401
R D+V++N +I+ + E + + K++ GI PD T+ +L+
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 15/262 (5%)
Query: 53 RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLA 112
+P+ Y+ + + A N++ A GLK ++ N L+S + K +
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD----GLKPNTVGFNCLISAFCKEHRIP 476
Query: 113 SVERAFAEIE----YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNR---SNVAVWNAII 165
F E+ PD Y++ +++S + + AL L M + +N +N +I
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 166 TRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGF 224
G A L +M G D T+ S++ LC +D R + ++R G
Sbjct: 537 N-AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 225 LARTSVVNSLITMYFNCGCVVDAYQVFGE--VEAGLRDHVTYNAMIDGLVRVDRNEDAFV 282
N LI G V +A + E + D VT+N++I+GL R R ED
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 283 MFRDMQKACFSPMEATFVSVMS 304
MFR +Q P TF ++MS
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMS 677
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 143/714 (20%), Positives = 294/714 (41%), Gaps = 98/714 (13%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N L+ L R ++ ++L+LF + S ++P YT I + + +A ++
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMES-LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEY--------PDDYSWTTMLSA 135
I + A + SLY+ A+ A +R +I Y PD ++ M+
Sbjct: 461 TKGIAPNIVACNA------SLYSLAK--AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 136 STRLGHVGDALKLFDQMPN---RSNVAVWNAII-TRCGADNGHDDVAFDLFRDMQKIGVR 191
+++G + +A+KL +M +V V N++I T AD D A+ +F M+++ ++
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD--RVDEAWKMFMRMKEMKLK 570
Query: 192 PDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSL-ITMYFNCGCVVDAY-- 248
P T+ ++L+ L G+ ++ + G + + N++ F+C C D
Sbjct: 571 PTVVTYNTLLA----GLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 249 ---QVFGEVEAG-LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
+F ++ G + D TYN +I GLV+ + ++A F M+K + P T +++
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLP 685
Query: 305 SC-------------SSLRVGCQAQA-----QSIKTGFDAYTAVNNAT------------ 334
++ C Q + + A ++NA
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGIC 745
Query: 335 ---------MTMYSC-FGKVNEAQNIFERME-----ERDLVSWNIMISMFFQENLNETAI 379
+ YSC V+ A+ +FE+ + L ++N++I + ++ E A
Sbjct: 746 RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 805
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAY 435
+L+++ G PD TY LL A ++ + L ++ + E N +I+
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865
Query: 436 CRNGRINWALQIFSNLPY-----KSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
+ G ++ AL ++ +L + ++ +I G +G + + F +L+ +PN
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 491 AYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFN 550
+ +++ G ++ + LV G +D L F
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 551 AM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
+ + D + +N +I+ + + +EA+ F M+ S GI PD T+ ++
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045
Query: 607 GLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA----ERLIKGGY 656
G+V++ +I++ + G P+V F+ ++ SG E A + ++ GG+
Sbjct: 1046 GMVEEAGKIYN-EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 142/678 (20%), Positives = 256/678 (37%), Gaps = 96/678 (14%)
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSAS 136
+++ I G + +SL+ K D+ SV E+E P+ Y++T +
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 137 TRLGHVGDALKLFDQMPNR---SNVAVWNAII-TRCGADNGHDDVAFDLFRDMQKIGVRP 192
R G + +A ++ +M + +V + +I C A D A ++F M+ +P
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL--DCAKEVFEKMKTGRHKP 326
Query: 193 DGYTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVF 251
D T+ ++L S LD + S + + G + L+ G +A+
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 252 GEV-EAGLRDHV-TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS--SCS 307
+ + G+ ++ TYN +I GL+RV R +DA +F +M+ P T++ + S
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 308 SLRVGCQAQAQSIKT-GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE----RDLVSW 362
V + +KT G NA++ + G+ EA+ IF +++ D V++
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 363 NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGL 422
N+M+ + + + AI +M G EPD SL+ V+ + ++
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 423 MKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQ 478
MK++ N+L+A +NG+I A+++F G + GCP +
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFE---------------GMVQKGCPPNTI-T 610
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK 538
F+ L + K + E++L ++
Sbjct: 611 FNTLFDCLCK----------------------------------NDEVTLALKMLFKMMD 636
Query: 539 CGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTI 598
G + D ++N +I ++GQ KEA+C F Q+ + PD T
Sbjct: 637 MGCVP------------DVFTYNTIIFGLVKNGQVKEAMCFFH--QMKKLVYPDFVTLCT 682
Query: 599 VLSACSHVGLVDDGTRIFDMMVNIYGFVPS----VDHFSCIVDLLGRSGYLEEAERLIKG 654
+L L++D +I + P+ D I+ G + +ERL+
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742
Query: 655 GYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEA 714
G +I + H N+ AR L EK + V L G EA
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVS----GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA 798
Query: 715 ANLRDMMREFGTTKQPGC 732
+ F K GC
Sbjct: 799 DMIEIAQDVFLQVKSTGC 816
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 201/445 (45%), Gaps = 69/445 (15%)
Query: 53 RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSL---LSLYAKA- 108
PD TLS+ + +++ + A +Q+ + G K + +L L L+ KA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQM----VEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 109 EDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAII 165
E +A V++ PD ++ T+++ + G + AL L +M ++V ++N II
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 166 TRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFL 225
H D A +LF +M G+RPD +T++S++S L ++GR + + S +
Sbjct: 266 DGL-CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC----LCNYGRWSDASRLLSDMI 320
Query: 226 ARTSVVN-----SLITMYFNCGCVVDAYQVFGEV--EAGLRDHVTYNAMIDGLVRVDRNE 278
R N +LI + G +V+A +++ E+ + D TY+++I+G DR +
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 279 DAFVMFRDM-QKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTM 337
+A MF M K CF +V++ + ++ C+A+
Sbjct: 381 EAKHMFELMISKDCFP-------NVVTYSTLIKGFCKAK--------------------- 412
Query: 338 YSCFGKVNEAQNIFERMEERDL----VSWNIMISMFFQENLNETAILTYLKMRRVGIEPD 393
+V E +F M +R L V++ +I FFQ + A + + +M VG+ P+
Sbjct: 413 -----RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 394 EFTYGSLLGA---SDSLQVVEMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFS 449
TY LL + L +V L + + + N +I C+ G++ ++F
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 450 NLPYK----SLISWNTIISGFLTNG 470
NL K ++I++NT+ISGF G
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKG 552
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 113/539 (20%), Positives = 233/539 (43%), Gaps = 65/539 (12%)
Query: 141 HVGDALKLF-DQMPNRS--NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
V DA+ LF D + +R ++ +N +++ N + + L MQ +G+ D YT+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFE-LVISLGEQMQTLGISHDLYTY 121
Query: 198 TSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE-VE 255
+ ++ C L V + +++ G+ ++SL+ Y + + DA + + VE
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 256 AGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQ 314
G + D T+ +I GL ++ +A + M ++ GCQ
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM---------------------VQRGCQ 220
Query: 315 AQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME----ERDLVSWNIMISMFF 370
+ Y V N G ++ A ++ ++ME E D+V +N +I
Sbjct: 221 PDLVT-------YGTVVNGLCKR----GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGA-------SDSLQVV-EMVHSLLSKIGL 422
+ + A+ + +M GI PD FTY SL+ SD+ +++ +M+ ++
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP--- 326
Query: 423 MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQ 478
V ++LI A+ + G++ A +++ + +S+ +++++I+GF + +
Sbjct: 327 -NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK 538
F +++ PN G ++ + + G L+ + +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 539 CGSLDGSLGVFNAMVK----RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHA 594
D + VF MV + +++N L+ ++G+ +A+ FE +Q S +EPD
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST-MEPDIY 504
Query: 595 TFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
T+ I++ G V+DG +F +++ G P+V ++ ++ R G EEA+ L+K
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELF-CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/512 (20%), Positives = 210/512 (41%), Gaps = 41/512 (8%)
Query: 123 YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNR--SNVAVWNAIITRCGADNGHDDVAFD 180
+P + +LSA ++ + L +QM S+ +I C +A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 181 LFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYF 239
+ M K+G PD T +S+L+ C + + + ++ G+ T +LI F
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 240 NCGCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEA 297
+A + + V+ G + D VTY +++GL + + A + + M+K +EA
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG---KIEA 256
Query: 298 TFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATM--------TMYSC---FGKVNE 346
V + L + + + + +T ++N + ++ SC +G+ ++
Sbjct: 257 DVVIYNTIIDGL-----CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 347 AQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
A + M ER ++V+++ +I F +E A Y +M + I+PD FTY SL+
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 403 A---SDSL-QVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL-- 456
D L + M ++SK V ++LI +C+ R+ +++F + + L
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 457 --ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVH 514
+++ T+I GF F +++ + PN V
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 515 GYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQH 570
Y+ R +I N ++ K G ++ +F + V + I++N +IS + +
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 571 GQGKEAVCCFEAMQISPGIEPDHATFTIVLSA 602
G +EA + M+ G P+ T+ ++ A
Sbjct: 552 GSKEEADSLLKKMK-EDGPLPNSGTYNTLIRA 582
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 165/416 (39%), Gaps = 59/416 (14%)
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA-------SDSL--- 407
DL +++I I+ F + + A+ KM ++G EPD T SLL SD++
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 408 -QVVEM------------VHSLL------SKIGLMKVEV----------LNSLIAAYCRN 438
Q+VEM +H L + L+ V +++ C+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 439 GRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXX 494
G I+ AL + + + + +NTII G L F+ + N ++P+ +
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 495 XXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK 554
++ ++ + + +AL+ + K G L + +++ M+K
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 555 R----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVD 610
R D ++++LI+ + H + EA FE M IS P+ T++ ++ V+
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM-ISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 611 DGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGY-FGANSNICWS--L 667
+G +F M G V + ++ ++ ++ + A+ + K G + NI L
Sbjct: 416 EGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 668 FSACAAHGNLRLGRMVARLLLEKDHNNPSVY---VLLSNICAAA---GQWEEAANL 717
+G L MV L++ P +Y +++ +C A WE NL
Sbjct: 475 LDGLCKNGKLAKA-MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 102/181 (56%), Gaps = 3/181 (1%)
Query: 511 KQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQH 570
K VH +I S+IS N+++ MY+ CGS++ +L VFN+M +R+ +W +I +A++
Sbjct: 201 KVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKN 260
Query: 571 GQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVD 630
GQG++A+ F + G +PD F + AC +G +++G F+ M YG +P ++
Sbjct: 261 GQGEDAIDTFSRFK-QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCME 319
Query: 631 HFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEK 690
H+ +V +L GYL+EA R ++ N ++ +L + HG+L LG ++ +
Sbjct: 320 HYVSLVKMLAEPGYLDEALRFVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQL 377
Query: 691 D 691
D
Sbjct: 378 D 378
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 6/137 (4%)
Query: 125 DDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRD 184
D ++ +++ + G V DAL +F+ MP R N+ W +I RC A NG + A D F
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPER-NLETWCGVI-RCFAKNGQGEDAIDTFSR 272
Query: 185 MQKIGVRPDGYTFTSMLSLCSVELLDFGR---HVHSVVIRSGFLARTSVVNSLITMYFNC 241
++ G +PDG F + C V L D H S+ G + SL+ M
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGV-LGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 242 GCVVDAYQVFGEVEAGL 258
G + +A + +E +
Sbjct: 332 GYLDEALRFVESMEPNV 348
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 392 PDEFTYGSLLGASDSLQVVEMVHSLL-SKIGLMKVEVLNSLIAAYCRNGRINWALQIFSN 450
P F L G + +LQ ++VH + S +G+ + NS+I Y G + AL +F++
Sbjct: 182 PRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNS 241
Query: 451 LPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
+P ++L +W +I F NG ++ FS KP+
Sbjct: 242 MPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDG 282
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 215/508 (42%), Gaps = 91/508 (17%)
Query: 135 ASTRLGHV--GDALKLFDQMPNR---SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIG 189
+ TRL + DA+ LF M ++ +N +++ +D V L + M+ +G
Sbjct: 57 SKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD-VVISLGKKMEVLG 115
Query: 190 VRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAY 248
+R D YTF +++ C + + +++ G+ + SL+ + V DA
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 249 QVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS- 305
+ + VE G + D V YNA+ID L + R DAF F+++++ P T+ ++++
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 306 CSSLRVGCQAQAQS--IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
C+S R A+ S IK +A + + GKV EA+ +FE
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE----------- 284
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSL-QVVEMVHSLLSK 419
+M R+ I+PD TY SL+ D + + +M ++SK
Sbjct: 285 --------------------EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 420 IGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLIS----WNTIISGFLTNGCPLQG 475
L V N+LI +C+ R+ +++F + + L+S +NT+I GF G +
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 476 LEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTM 535
E FS Q+ + G S +I N L+
Sbjct: 385 QEFFS-------------------------------QMDFF----GISPDIWTYNILLGG 409
Query: 536 YAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEP 591
G L+ +L +F M KR D +++ +I + G+ +EA F ++ + G++P
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK-GLKP 468
Query: 592 DHATFTIVLSACSHVGLVDDGTRIFDMM 619
D T+T ++S GL+ + ++ M
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 162/364 (44%), Gaps = 31/364 (8%)
Query: 23 LNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQL 82
+ L+ R N+ ++++ L ++ +PD + I + T+ A F ++
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKM-VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 83 HAHAIRTGLKAHSHVANSLL--SLYAKAEDLAS--VERAFAEIEYPDDYSWTTMLSASTR 138
IR + ++ + N L S ++ A L S +++ P+ +++ +L A +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT----PNVITYSALLDAFVK 272
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNG---HD--DVAFDLFRDMQKIGVRPD 193
G V +A +LF++M S + I+T NG HD D A +F M G D
Sbjct: 273 NGKVLEAKELFEEMVRMS---IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 194 GYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
++ ++++ C + ++ G + + + G ++ T N+LI +F G V A + F
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 253 EVEA-GLRDHV-TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS-CSSL 309
+++ G+ + TYN ++ GL E A V+F DMQK T+ +V+ C +
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 310 RVG------CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWN 363
+V C + +K YT + + T G ++E + ++ +M++ L+ +
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK----GLLHEVEALYTKMKQEGLMKND 505
Query: 364 IMIS 367
+S
Sbjct: 506 CTLS 509
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/341 (19%), Positives = 148/341 (43%), Gaps = 20/341 (5%)
Query: 343 KVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYG 398
K+N+A ++F M + +V +N ++S + + I KM +GI D +T+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 399 SLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLP-- 452
++ V + S+L K+ + E + SL+ +CR R++ A+ + +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 453 -YK-SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHG 510
YK ++++N II + F + ++PN
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 511 KQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISA 566
++ +++ + + +AL+ + K G + + +F MV+ D +++++LI+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
H + EA F+ M +S G D ++ +++ V+DG ++F M G V
Sbjct: 305 LCLHDRIDEANQMFDLM-VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLV 362
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERLI-KGGYFGANSNICWS 666
+ ++ ++ ++G +++A+ + +FG + +I W+
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI-WT 402
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 136/639 (21%), Positives = 258/639 (40%), Gaps = 64/639 (10%)
Query: 88 RTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEY----PDDYSWTTML---SASTRLG 140
RT L NSLL + A+ + ++++ E+ P + M+ + +L
Sbjct: 91 RTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLR 150
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSM 200
D +++ + R + + +I A N H D+ LF+ MQ++G P + FT++
Sbjct: 151 EGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN-HSDMMLTLFQQMQELGYEPTVHLFTTL 209
Query: 201 LSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA-GL 258
+ + E +D + + S A + N I + G V A++ F E+EA GL
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
Query: 259 R-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQA-- 315
+ D VTY +MI L + +R ++A MF ++K P + +++ S +A
Sbjct: 270 KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYS 329
Query: 316 --QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER---DLVSWNIMISMFF 370
+ Q K + A N +T GKV+EA +FE M++ +L ++NI+I M
Sbjct: 330 LLERQRAKGSIPSVIAY-NCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLC 388
Query: 371 QENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNS 430
+ +TA M++ G+ P+ V +N
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPN-------------------------------VRTVNI 417
Query: 431 LIAAYCRNGRINWALQIFSNLPYK----SLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
++ C++ +++ A +F + YK I++ ++I G G + + +L++
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSL 546
+ N+ G +++ ++ S ++ L N + K G +
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 547 GVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSA 602
+F + R D S++ LI + G E F +M+ G D + IV+
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK-EQGCVLDTRAYNIVIDG 596
Query: 603 CSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI---KGGYFGA 659
G V+ ++ + M GF P+V + ++D L + L+EA L K
Sbjct: 597 FCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 660 NSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVY 698
N I SL G + ++ L++K P++Y
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL-TPNLY 693
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 159/756 (21%), Positives = 294/756 (38%), Gaps = 134/756 (17%)
Query: 25 HLLATLTR----SNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGN 80
HL TL R + +L L ++ SS +L D + I + A F +
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSS-SLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSAS 136
++ A+ GLK S++ + KA L F +E P Y++ TM+
Sbjct: 263 EIEAN----GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318
Query: 137 TRLGHVGDALKLFDQMPNR---SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
G +A L ++ + +V +N I+T C G D A +F +M+K P+
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT-CLRKMGKVDEALKVFEEMKKDAA-PN 376
Query: 194 GYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
T+ ++ LC LD + + ++G VN ++ + +A +F
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 253 EVEAGL--RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLR 310
E++ + D +T+ ++IDGL +V R +DA+ ++ M + S C R
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM--------------LDSDC---R 479
Query: 311 VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMI 366
IK F+ G+ + I++ M + DL N +
Sbjct: 480 TNSIVYTSLIKNFFN---------------HGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Query: 367 SMFFQENLNET--AILTYLKMRRVGIEPDEFTYG----SLLGASDSLQVVEMVHSLLSKI 420
F+ E A+ +K RR PD +Y L+ A + + E+ +S+ +
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARR--FVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 421 GLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFS 480
++ N +I +C+ G++N A Q+ + K T++ T G + GL +
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP--TVV----TYGSVIDGLAKID 636
Query: 481 ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLG----NALVTMY 536
L AY + S I L ++L+ +
Sbjct: 637 RL------DEAYM-----------------------LFEEAKSKRIELNVVIYSSLIDGF 667
Query: 537 AKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPD 592
K G +D + + ++++ + +WN+L+ A + + EA+ CF++M+ P+
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK-ELKCTPN 726
Query: 593 HATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI 652
T+ I+++ V + +F + G PS ++ ++ L ++G + EA L
Sbjct: 727 QVTYGILINGLCKVRKFNKAF-VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 653 KGGYFGANSNI----CWSLFSACAAHGNLRLGRMVARLLLEKDH------NNPSVYVLL- 701
F AN + C++ ++GN M A L E+ +N + VLL
Sbjct: 786 D--RFKANGGVPDSACYNAMIEGLSNGNR---AMDAFSLFEETRRRGLPIHNKTCVVLLD 840
Query: 702 ---SNICAAAGQWEEAANLRDMMREFGTTKQPGCSW 734
N C E+AA + ++RE G + SW
Sbjct: 841 TLHKNDC-----LEQAAIVGAVLRETGKARHAARSW 871
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 142/651 (21%), Positives = 282/651 (43%), Gaps = 84/651 (12%)
Query: 23 LNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQL 82
+N L+ L + N TE+ +L++++ + + D ++T + A+ R A ++
Sbjct: 201 VNRTLSALVQRNSLTEAKELYSRMVA---IGVDGDNVTTQLLMRASLREEKPAEAL--EV 255
Query: 83 HAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE-----YPDDYSWTTMLSAST 137
+ AI G + S + + + K DLA E++ P ++T+++ AS
Sbjct: 256 LSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASV 315
Query: 138 RLGHVGDALKLFDQMPNRS---NVAVWNAIITRCGADNGHDDV-AFDLFRDMQKIGVRPD 193
+ G++ DA++L D+M + NV ++IT G +D V A LF M+K G P+
Sbjct: 316 KQGNMDDAIRLKDEMLSDGISMNVVAATSLIT--GHCKNNDLVSALVLFDKMEKEGPSPN 373
Query: 194 GYTFTSMLSLCSV-----ELLDFGR------------HVHSVV----------------- 219
TF+ ++ + L+F + HVH+++
Sbjct: 374 SVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFD 433
Query: 220 --IRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA-GLRDHV-TYNAMIDGLVRVD 275
+G LA V N++++ G +A ++ ++E+ G+ +V +YN ++ G R
Sbjct: 434 ESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQK 492
Query: 276 RNEDAFVMFRDMQKACFSPMEATFVSVMSSC-------SSLRVGCQAQAQSIKTGFDAYT 328
+ A ++F ++ + P T+ ++ C ++L V + +I+ Y
Sbjct: 493 NMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQ 552
Query: 329 AVNNATMTMYSCFGKVNEAQNIFERM-EERDL----VSWNIMISMFFQENLNETAILTYL 383
+ N + G+ ++A+ + M EE+ L +S+N +I FF+E ++A+ Y
Sbjct: 553 TIINGLCKV----GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYE 608
Query: 384 KMRRVGIEPDEFTYGSLLGA----SDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNG 439
+M GI P+ TY SL+ + Q +EM + +K + + +LI +C+
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 440 RINWALQIFSNLPYKSLIS----WNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXX 495
+ A +FS L + L +N++ISGF G + L+ + +L L+ +
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 496 XXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR 555
+++ + G + + +V +K G + +F M K
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 556 ----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSA 602
+ + +NA+I+ + + G EA + M + GI PD ATF I++S
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM-LDKGILPDGATFDILVSG 838
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 126/600 (21%), Positives = 244/600 (40%), Gaps = 99/600 (16%)
Query: 132 MLSASTRLGHVGDALKLFDQ-------MPNRSNVAVWNAIITRCGADNGHDDVAFDLFRD 184
++ R G V AL++F +P S + N++I G+D D+ D F
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI---GSD--RVDLIADHFDK 206
Query: 185 MQKIGVRPDGYT---FTSMLSLCSVEL---LDFGRHVHSVVIRSGFLA-----------R 227
+ + G+ P G + F C E+ LDF R V R G ++ +
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ 266
Query: 228 TSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
V + L+++ +CG + VT+ +I+G + + AF +F+ M
Sbjct: 267 IEVASRLLSLVLDCGPAPNV--------------VTFCTLINGFCKRGEMDRAFDLFKVM 312
Query: 288 QKACFSP---MEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKV 344
++ P +T + L +G + +Q++ G V ++T+ +Y G +
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 345 NEAQNIFERME----ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSL 400
A +++RM ++V++ I+I Q+ A Y ++ + G+EP TY SL
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Query: 401 ----------------------LGASDSLQVVEMVHSLLSKIGLM--------------- 423
+G + + ++ LSK GLM
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 424 --KVEVLNSLIAAYCRNGRINWALQIFSNLPY----KSLISWNTIISGFLTNGCPLQGLE 477
V V NSLI +CR R + AL++F + + ++ T++ + G + L
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 478 QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYA 537
F + L+P+A G Q+ + R+ S++I++ N ++ +
Sbjct: 553 LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 612
Query: 538 KCGSLDGSLGVFNAMV----KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDH 593
KC ++ + FN ++ + D +++N +I Y + EA FE ++++P P+
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP-FGPNT 671
Query: 594 ATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
T TI++ +D R+F +M G P+ + C++D +S +E + +L +
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAE-KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 120/603 (19%), Positives = 227/603 (37%), Gaps = 120/603 (19%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
L+ + + + LF ++ + PD ST I A G++L +
Sbjct: 292 LINGFCKRGEMDRAFDLF-KVMEQRGIEPDLIAYSTLIDGYFK----AGMLGMGHKLFSQ 346
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASV----ERAFAEIEYPDDYSWTTMLSASTRLGH 141
A+ G+K V +S + +Y K+ DLA+ +R + P+ ++T ++ + G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 142 VGDALKLFDQMPNR---SNVAVWNAIIT---RCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
+ +A ++ Q+ R ++ ++++I +CG F L+ DM K+G PD
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS----GFALYEDMIKMGYPPDVV 462
Query: 196 TFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
+ ++ S + G +H++ L ++ +N
Sbjct: 463 IYGVLVDGLSKQ----GLMLHAMRFSVKMLGQSIRLNV---------------------- 496
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC--------- 306
V +N++IDG R++R ++A +FR M P ATF +VM
Sbjct: 497 ------VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 307 -----SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER---- 357
++G + A + T DA+ T+ + +F+ M+
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL-----------QLFDLMQRNKISA 599
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLL 417
D+ N++I + F+ + E A + + +EPD TY
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY-------------------- 639
Query: 418 SKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNL---PYKSLISWNTIISGFLTNGCPLQ 474
N++I YC R++ A +IF L P+ TI+ L +
Sbjct: 640 -----------NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 475 G-LEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALV 533
G + FS + KPNA ++ + G S I + ++
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748
Query: 534 TMYAKCGSLDGSLGVF----NAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
K G +D + +F +A + D +++ LI Y + G+ EA +E M + G+
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM-LRNGV 807
Query: 590 EPD 592
+PD
Sbjct: 808 KPD 810
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 129/575 (22%), Positives = 227/575 (39%), Gaps = 92/575 (16%)
Query: 98 ANSLLS--LYAKAE-DLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPN 154
ANS+L + +KA+ D+ V + + P + + S LG + +A++ F +M
Sbjct: 161 ANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKR 220
Query: 155 R---SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDF 211
N ++ R DDV F+DM G RP +T+ M+ E
Sbjct: 221 FRVFPKTRSCNGLLHRFAKLGKTDDVK-RFFKDMIGAGARPTVFTYNIMIDCMCKE---- 275
Query: 212 GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE-AGL-RDHVTYNAMID 269
G V A +F E++ GL D VTYN+MID
Sbjct: 276 ------------------------------GDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 270 GLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTA 329
G +V R +D F +M+ C P T+
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITY------------------------------ 335
Query: 330 VNNATMTMYSCFGKVNEAQNIFERME----ERDLVSWNIMISMFFQENLNETAILTYLKM 385
NA + + FGK+ + M+ + ++VS++ ++ F +E + + AI Y+ M
Sbjct: 336 --NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 386 RRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRI 441
RRVG+ P+E+TY SL+ A+ + + L +++ + VE +LI C R+
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 442 NWALQIFSNLPYKSLI----SWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXX 497
A ++F + +I S+N +I GF+ + LE + L +KP+
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 498 XXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRD- 556
K V + G + + L+ Y K G+ L + + M + D
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Query: 557 ---TISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGT 613
+++ LI ++ +AV F + G++ + A FT ++ V+ T
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 633
Query: 614 RIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA 648
+F+ MV G VP ++ ++D + G + EA
Sbjct: 634 TLFEQMVQ-KGLVPDRTAYTSLMDGNFKQGNVLEA 667
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 111/554 (20%), Positives = 236/554 (42%), Gaps = 51/554 (9%)
Query: 103 SLYAKAEDLASVERA---FAEIE----YPDDYSWTTMLSASTRLGHVGDALKLFDQMPN- 154
+L++ DL +E A F++++ +P S +L +LG D + F M
Sbjct: 197 ALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA 256
Query: 155 --RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLD- 210
R V +N +I C G + A LF +M+ G+ PD T+ SM+ V LD
Sbjct: 257 GARPTVFTYNIMID-CMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 315
Query: 211 ---FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA-GLRDH-VTYN 265
F + + + N+LI + G + + + E++ GL+ + V+Y+
Sbjct: 316 TVCFFEEMKDMCCEPDVIT----YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 266 AMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM-SSCS------SLRVGCQAQAQ 318
++D + + A + DM++ P E T+ S++ ++C + R+G +
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 319 SIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE----RDLVSWNIMISMFFQENL 374
++ YTA+ + ++ EA+ +F +M+ +L S+N +I F +
Sbjct: 432 GVEWNVVTYTALIDGLCDA----ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNS 430
+ A+ +++ GI+PD YG+ + SL+ +E +++++ ++ + +
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 431 LIAAYCRNGRINWALQIFSNLP----YKSLISWNTIISGFLTNGCPLQGLEQFSALLNT- 485
L+ AY ++G L + + +++++ +I G N + ++ F+ + N
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 486 PLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGS 545
L+ NA + +++ G + + +L+ K G++ +
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 546 LGVFNAM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLS 601
L + + M +K D +++ +L+ + Q ++A E M I GI PD VL
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM-IGEGIHPDEVLCISVLK 726
Query: 602 ACSHVGLVDDGTRI 615
+G +D+ +
Sbjct: 727 KHYELGCIDEAVEL 740
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/472 (17%), Positives = 184/472 (38%), Gaps = 54/472 (11%)
Query: 23 LNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQL 82
L H A L + T+ +K F + RP +T + I A ++
Sbjct: 233 LLHRFAKLGK----TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 288
Query: 83 HAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSASTR 138
GL + NS++ + K L F E++ PD ++ +++ +
Sbjct: 289 KFR----GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 139 LGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
G + L+ + +M + NV ++ ++ G A + DM+++G+ P+ Y
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVD-AFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 196 TFTSMLSL-CSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV 254
T+TS++ C + L + + +++ G +LI + + +A ++FG++
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 255 EAG--LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSP---MEATFVSVMSSCSSL 309
+ + + +YNA+I G V+ + A + +++ P + TF+ + S +
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMF 369
+ + G A + + M Y G E ++ + M+E D+
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI---------- 573
Query: 370 FQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLM-KVEVL 428
E ++T+ + D L+ + V+ + + + GL +
Sbjct: 574 ------EVTVVTFC------VLIDGLCKNKLVS-----KAVDYFNRISNDFGLQANAAIF 616
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYKSLI----SWNTIISGFLTNGCPLQGL 476
++I C++ ++ A +F + K L+ ++ +++ G G L+ L
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 229/529 (43%), Gaps = 81/529 (15%)
Query: 128 SWTTMLSASTRLGHVGDALKLFDQMPNRSNVAV---WNAIITRCGADNGHDDVAFDLFRD 184
++ + ++ + G + +A+++FD+M + S +N I ++ + +A ++ D
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFE-LAEAIYWD 69
Query: 185 MQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGC 243
M+ +G +T++ +S LC V+ D + S + GF+ N + +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 244 VVDAYQVF-GEVEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
V A Q F V+ G D V+Y +I+GL R + DA ++ M ++ SP
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDN----- 184
Query: 302 VMSSCSSLRVG-CQAQ---------AQSIKTG-FDAYTAVNNATMTMYSCFGKVNEAQNI 350
+C++L VG C A+ A+ IK+ T V NA ++ + G++ +A+ +
Sbjct: 185 --KACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
Query: 351 FERME----ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS 406
M E DLV++N++++ ++ N+ + A +M R GI+ D ++Y LL
Sbjct: 243 KSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Query: 407 LQVVEMVHSLLSK----IGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----IS 458
+ + ++ + K G V ++LI +CR A ++F + K + ++
Sbjct: 303 VSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 459 WNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYIL 518
+ ++I FL G + + L P+ + + IL
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGLSPD--------------------RIFYTTIL 402
Query: 519 RHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGK 574
H K G++D + GVFN M++ D IS+N+LIS + G+
Sbjct: 403 DH---------------LCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVT 447
Query: 575 EAVCCFEAMQISPGIE--PDHATFTIVLSACSHVGLVDDGTRIFDMMVN 621
EA+ FE M+ G E PD TF ++ + +++D M++
Sbjct: 448 EAIKLFEDMK---GKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 158/368 (42%), Gaps = 62/368 (16%)
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNA-----IITRCGADNGHDDVA 178
PD S+T +++ R G V DA+++++ M RS V+ N ++ C A D+A
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNAMI-RSGVSPDNKACAALVVGLCHARKV--DLA 203
Query: 179 FDLF-RDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLIT 236
+++ +++ V+ + +++S C ++ + S + + G N L+
Sbjct: 204 YEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Query: 237 MYFNCGCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAF-VMFRDMQKACFS 293
Y++ + A V E V +G++ D +YN ++ RV + + M ++M+
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEME----- 318
Query: 294 PMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
F V+S + + C+A +A +FE
Sbjct: 319 --PRGFCDVVSYSTLIETFCRA--------------------------SNTRKAYRLFEE 350
Query: 354 MEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQV 409
M ++ ++V++ +I F +E + A +M +G+ PD Y ++L
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 410 VEMVHSLLSKIGLMKVEV------LNSLIAAYCRNGRINWALQIFSNLPYKSL----ISW 459
V+ + + + +++ E+ NSLI+ CR+GR+ A+++F ++ K +++
Sbjct: 411 VDKAYGVFND--MIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTF 468
Query: 460 NTIISGFL 467
II G +
Sbjct: 469 KFIIGGLI 476
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 138/658 (20%), Positives = 259/658 (39%), Gaps = 143/658 (21%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHS---SHTLRPDHYTLSTAITASANTRPAATA- 75
++ N L + + ++ Q+ L L Q+ S +H++ YTLS I R + A
Sbjct: 88 VIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSI----YTLSIMINCFCRCRKLSYAF 143
Query: 76 TTFGNQLHAHAIRTGLKAHSHVANSLLS---LYAK-AEDLASVERAFAEIEYPDDYSWTT 131
+T G ++ G + + + N+LL+ L + +E L V+R P + T
Sbjct: 144 STMG-----KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 132 MLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI 188
+++ G V DA+ L D+M + N + ++ +G +A +L R M++
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN-VMCKSGQTALAMELLRKMEER 257
Query: 189 GVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAY 248
++ D ++ +I G S+ N A+
Sbjct: 258 NIKLDAVKYS--------------------IIIDGLCKDGSLDN--------------AF 283
Query: 249 QVFGEVE-AGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC 306
+F E+E G + D +TYN +I G R +D + RDM K SP TF ++ S
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS- 342
Query: 307 SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL----VSW 362
+ GK+ EA + + M +R + +++
Sbjct: 343 -------------------------------FVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 363 NIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGL 422
N +I F +EN E AI M G +PD T+
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF------------------------- 406
Query: 423 MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLI----SWNTIISGFLTNGCPLQGLEQ 478
N LI YC+ RI+ L++F + + +I ++NT++ GF +G +
Sbjct: 407 ------NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK 538
F +++ ++P+ ++ G I + E+ +G ++ ++
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM--ELDIGIYMIIIHGM 518
Query: 539 CGS--LDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPD 592
C + +D + +F ++ VK D ++N +IS + +A F M G PD
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT-EEGHAPD 577
Query: 593 HATFTIVLSACSHVGLVDDGTRIFDMMVNIY--GFVPSVDHFSCIVDLLGRSGYLEEA 648
T+ I++ A H+G DD T +++ + GF V ++++L SG L+++
Sbjct: 578 ELTYNILIRA--HLG-DDDATTAAELIEEMKSSGFPADVSTVKMVINMLS-SGELDKS 631
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 129/327 (39%), Gaps = 53/327 (16%)
Query: 343 KVNEAQNIFERM-EERDL---VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYG 398
K ++A ++F M + R L + +N + S + E + +M GI +T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 399 SLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLP-- 452
++ + + S + KI + E + N+L+ C R++ AL++ +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 453 --YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHG 510
+LI+ NT+++G NG + ++ T +PN
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN-------------------- 227
Query: 511 KQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISA 566
E++ G L M K G ++ + M +K D + ++ +I
Sbjct: 228 --------------EVTYGPVLNVM-CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
+ G A F M+I G + D T+ ++ + G DDG ++ M+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK-RKIS 330
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERLIK 653
P+V FS ++D + G L EA++L+K
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLK 357
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 207/462 (44%), Gaps = 64/462 (13%)
Query: 53 RPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSL---LSLYAKA- 108
PD TLS+ + +++ + A +Q+ + G K + +L L L+ KA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQM----VEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 109 EDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAII 165
E +A V++ PD ++ T+++ + G + AL L ++M ++NV ++N II
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 166 TRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFL 225
H +VA DLF +M+ G+RP+ T+ S+++ L ++GR + + S L
Sbjct: 266 DSL-CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC----LCNYGRWSDASRLLSNML 320
Query: 226 ART---SVV--NSLITMYFNCGCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNE 278
+ +VV N+LI +F G +V+A ++ E ++ + D +TYN +I+G +R +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 279 DAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMY 338
+A MF+ M + C Q+ T + +
Sbjct: 381 EAKQMFKFM---------------------VSKDCLPNIQTYNTLINGFCKCK------- 412
Query: 339 SCFGKVNEAQNIFERMEERDL----VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDE 394
+V + +F M +R L V++ +I FFQ ++A + + +M + D
Sbjct: 413 ----RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 395 FTYGSLLGASDS---LQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSN 450
TY LL S L ++ L K + + + + N++I C+ G++ A +F +
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Query: 451 LPYK-SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
L K ++++NT+ISG + + + F + PN+
Sbjct: 529 LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/501 (19%), Positives = 201/501 (40%), Gaps = 22/501 (4%)
Query: 123 YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNR--SNVAVWNAIITRCGADNGHDDVAFD 180
+P + +LSA ++ + L +QM S+ +I C +A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 181 LFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYF 239
+ M K+G PD T +S+L+ C + + + ++ G+ T +LI F
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 240 NCGCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEA 297
+A + + V+ G + D VTY +++GL + + A + M+ A
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 298 TFVSVMSSCSSLR---VGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM 354
F +++ S R V + G N+ + +G+ ++A + M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 355 EER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA----SDS 406
E+ ++V++N +I FF+E A + +M + I+PD TY L+ +
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 407 LQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTI 462
+ +M ++SK L ++ N+LI +C+ R+ +++F + + L +++ TI
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
I GF G F +++ + + + Y+ +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAM-VKRDTISWNALISAYAQHGQGKEAVCCFE 581
I + N ++ K G + + +F ++ +K D +++N +IS +EA F
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFR 559
Query: 582 AMQISPGIEPDHATFTIVLSA 602
M+ G P+ T+ ++ A
Sbjct: 560 KMK-EDGTLPNSGTYNTLIRA 579
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 139/343 (40%), Gaps = 49/343 (14%)
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA-------SDSL--- 407
DL +++I I+ F + + A+ KM ++G EPD T SLL SD++
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 408 -QVVEM------------VHSLL------SKIGLMKVEV----------LNSLIAAYCRN 438
Q+VEM +H L + L+ V +++ C+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 439 GRINWALQIFSNLP----YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXX 494
G I+ AL + + + +++ +NTII ++ F+ + ++PN
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 495 XXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK 554
++ +L + + NAL+ + K G L + + M++
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 555 R----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVD 610
R DTI++N LI+ + H + EA F+ M +S P+ T+ +++ V+
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM-VSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 611 DGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
DG +F M G V + ++ I+ ++G + A+ + K
Sbjct: 416 DGVELFREMSQ-RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 138/325 (42%), Gaps = 53/325 (16%)
Query: 343 KVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYG 398
KV++A ++F M + +V +N ++S + N E I +M+ +GI D +TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 399 SLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLP-- 452
+ + + ++L+K+ + E L+SL+ YC + RI+ A+ + +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 453 -YK-SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHG 510
YK ++ T+I G + + + ++ +P+ +G
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD---------------LVTYG 227
Query: 511 KQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISA 566
V+G R G +D +L + N M +K + + +N +I +
Sbjct: 228 TVVNGLCKR--------------------GDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
++ + AV F M+ + GI P+ T+ +++ + G D +R+ M+
Sbjct: 268 LCKYRHVEVAVDLFTEME-TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE-KKIN 325
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERL 651
P+V F+ ++D + G L EAE+L
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKL 350
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 168/392 (42%), Gaps = 19/392 (4%)
Query: 281 FVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSC 340
F + R+ +K + + +S + + + + + G+ +A ++ Y
Sbjct: 221 FAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGR 280
Query: 341 FGKVNEAQNIFERMEE----RDLVSWNIMISMFFQENLNETAILTYL-KMRRVGIEPDEF 395
G EA ++F M+E +LV++N +I + + + + +M+R G++PD
Sbjct: 281 SGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRI 340
Query: 396 TYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNL 451
T+ SLL + E +L ++ ++E N+L+ A C+ G+++ A +I + +
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 452 PYK----SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXX 507
P K +++S++T+I GF G + L F + + +
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 508 XHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNAL 563
+ + G ++ NAL+ Y K G D VF M + + ++++ L
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 564 ISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIY 623
I Y++ G KEA+ F + S G+ D ++ ++ A GLV + D M
Sbjct: 521 IDGYSKGGLYKEAMEIFREFK-SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK-E 578
Query: 624 GFVPSVDHFSCIVDLLGRSGYLEEAERLIKGG 655
G P+V ++ I+D GRS ++ + GG
Sbjct: 579 GISPNVVTYNSIIDAFGRSATMDRSADYSNGG 610
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 167/356 (46%), Gaps = 35/356 (9%)
Query: 127 YSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFR 183
Y+++ ++SA R G +A+ +F+ M R N+ +NA+I CG F
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328
Query: 184 DMQKIGVRPDGYTFTSMLSLCSV-ELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCG 242
+MQ+ GV+PD TF S+L++CS L + R++ + N+L+ G
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 243 CVVDAYQVFGE--VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQ-------KACFS 293
+ A+++ + V+ + + V+Y+ +IDG + R ++A +F +M+ + ++
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 294 PMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
+ + + V S +L + + + IK Y NA + Y GK +E + +F
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTY----NALLGGYGKQGKYDEVKKVFTE 504
Query: 354 MEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQV 409
M+ +L++++ +I + + L + A+ + + + G+ D Y +L+ D+L
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI---DALCK 561
Query: 410 VEMVHSLLSKIGLMKVE-------VLNSLIAAYCRNGRINWALQIFSN---LPYKS 455
+V S +S I M E NS+I A+ R+ ++ + +SN LP+ S
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD-YSNGGSLPFSS 616
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 40/211 (18%)
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHG-QGKE 575
G+ + + +AL++ Y + G + ++ VFN+M ++ + +++NA+I A + G + K+
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 576 AVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCI 635
F+ MQ + G++PD TF +L+ CS GL + +FD M N
Sbjct: 323 VAKFFDEMQRN-GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN-------------- 367
Query: 636 VDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLG-RMVARLLLEKDHNN 694
R I+ F N+ L A G + L ++A++ +++ N
Sbjct: 368 --------------RRIEQDVFSYNT-----LLDAICKGGQMDLAFEILAQMPVKRIMPN 408
Query: 695 PSVYVLLSNICAAAGQWEEAANLRDMMREFG 725
Y + + A AG+++EA NL MR G
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 201/444 (45%), Gaps = 34/444 (7%)
Query: 54 PDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLAS 113
PD TLS+ + + + + A +Q+ + + + + L +E +A
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 114 VERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAII-TRCG 169
++R A PD +++ T+++ + G + AL L +M ++V ++ II C
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 170 ADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTS 229
N +D A +LF +M G+RP+ T+ S++ L ++GR + + S + R
Sbjct: 268 YKNVND--ALNLFTEMDNKGIRPNVVTYNSLIRC----LCNYGRWSDASRLLSDMIERKI 321
Query: 230 VVN-----SLITMYFNCGCVVDAYQVFGEV--EAGLRDHVTYNAMIDGLVRVDRNEDAFV 282
N +LI + G +V+A +++ E+ + D TY+++I+G DR ++A
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 283 MFRDM-QKACFSPMEATFVSVMSS-CSSLRV--GCQAQAQSIKTGFDAYTAVNNATMTMY 338
MF M K CF P T+ +++ C + RV G + + + G T N +
Sbjct: 382 MFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 339 SCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDE 394
G + AQ IF++M D+++++I++ + E A++ + +++ +EPD
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 395 FTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSN 450
+TY ++ VE L + L V+ + ++I+ +CR G A +F
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 451 LPYKSLI----SWNTIISGFLTNG 470
+ + ++NT+I L +G
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDG 584
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 187/426 (43%), Gaps = 27/426 (6%)
Query: 246 DAYQVFGEV--EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM 303
DA +FGE+ L V +N ++ + ++++ + + MQ S ++ +++
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY-NIL 121
Query: 304 SSC----SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGK-VNEAQNIFERM---- 354
+C S L + + +K G++ ++ + Y C GK ++EA + ++M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGY-CHGKRISEAVALVDQMFVME 180
Query: 355 EERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVH 414
+ + V++N +I F N A+ +M G +PD FTYG+++ +++
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 415 SLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGF 466
SLL K+ K+E + ++I A C +N AL +F+ + K + +++N++I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 467 LTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEI 526
G S ++ + PN ++++ +++ +I
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 527 SLGNALVTMYAKCGSLDGSLGVFNAMVKRD----TISWNALISAYAQHGQGKEAVCCFEA 582
++L+ + LD + +F M+ +D +++N LI + + + +E + F
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRS 642
M G+ + T+ ++ G D +IF MV+ G P + +S ++D L +
Sbjct: 421 MS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPDIITYSILLDGLCKY 478
Query: 643 GYLEEA 648
G LE+A
Sbjct: 479 GKLEKA 484
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 114/557 (20%), Positives = 230/557 (41%), Gaps = 43/557 (7%)
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPN-RSNVAVWN-AIITRCGADNGHDDVAFDL 181
P + +LSA ++ + L ++M N R + +++ I+ C +A +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 182 FRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFN 240
M K+G PD T +S+L+ C + + + + + T N+LI F
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 241 CGCVVDAYQVFGEVEA-GLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEAT 298
+A + + A G + D TY +++GL + + A + + M+K +EA
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG---KIEAD 254
Query: 299 FVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATM--------TMYSC---FGKVNEA 347
V + +L +++ + +T ++N + ++ C +G+ ++A
Sbjct: 255 VVIYTTIIDAL-----CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 348 QNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+ M ER ++V+++ +I F +E A Y +M + I+PD FTY SL+
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Query: 404 ---SDSL-QVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL--- 456
D L + M ++SK V N+LI +C+ R+ +++F + + L
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 457 -ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHG 515
+++NT+I G G + F +++ + P+ V
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 516 YILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHG 571
Y+ + +I N ++ K G ++ +F ++ VK + I + +IS + + G
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Query: 572 QGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDH 631
+EA F M+ G P+ T+ ++ A G + M + GFV
Sbjct: 550 LKEEADALFREMK-EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC-GFVGDAST 607
Query: 632 FSCIVDLLGRSGYLEEA 648
S ++++L G LE++
Sbjct: 608 ISMVINML-HDGRLEKS 623
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/555 (20%), Positives = 235/555 (42%), Gaps = 68/555 (12%)
Query: 127 YSWTTMLSASTRLG-HVGDALKLFDQMPNR---SNVAVWNAIITRCGADNGHDDVAFDLF 182
Y + LS + L + DA+ LF +M ++ +N +++ N D + L
Sbjct: 45 YDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD-LVISLG 103
Query: 183 RDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNC 241
MQ + + D Y++ +++ C L V +++ G+ ++SL+ Y +
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 242 GCVVDAYQVFGE--VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATF 299
+ +A + + V + VT+N +I GL ++ +A + M
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM------------ 211
Query: 300 VSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME---- 355
+ GCQ F T VN G ++ A ++ ++ME
Sbjct: 212 ---------VARGCQPDL------FTYGTVVNGLCKR-----GDIDLALSLLKKMEKGKI 251
Query: 356 ERDLVSWNIMISMFFQ-ENLNETAILTYLKMRRVGIEPDEFTYGSLLGA-------SDSL 407
E D+V + +I +N+N+ A+ + +M GI P+ TY SL+ SD+
Sbjct: 252 EADVVIYTTIIDALCNYKNVND-ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 408 QVV-EMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTI 462
+++ +M+ ++ V ++LI A+ + G++ A +++ + +S+ +++++
Sbjct: 311 RLLSDMIERKINP----NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
I+GF + + F +++ PN G ++ + + G
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVC 578
N L+ + G D + +F MV D I+++ L+ ++G+ ++A+
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 579 CFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDL 638
FE +Q S +EPD T+ I++ G V+DG +F +++ G P+V ++ ++
Sbjct: 487 VFEYLQKSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLF-CSLSLKGVKPNVIIYTTMISG 544
Query: 639 LGRSGYLEEAERLIK 653
R G EEA+ L +
Sbjct: 545 FCRKGLKEEADALFR 559
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 162/374 (43%), Gaps = 42/374 (11%)
Query: 39 SLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVA 98
+L L ++ + D +T I A N + A ++ IR + ++ +
Sbjct: 239 ALSLLKKMEKGK-IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 99 NSLLSLYAKAEDLASVERAFAEIEY-PDDYSWTTMLSASTRLGHVGDALKLFDQMPNRSN 157
L + Y + D + + E + P+ +++ ++ A + G + +A KL+D+M RS
Sbjct: 298 RCLCN-YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS- 355
Query: 158 VAVWNAIITRCGADNG---HD--DVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDF 211
+ I T NG HD D A +F M P+ T+ +++ C + ++
Sbjct: 356 --IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 212 GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE-VEAGLR-DHVTYNAMID 269
G + + + G + T N+LI F G A ++F + V G+ D +TY+ ++D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 270 GLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTA 329
GL + + E A V+F +QK+ P T+ ++ + +A ++ G+D + +
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTY--------NIMIEGMCKAGKVEDGWDLFCS 525
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
++ + + +++ + MIS F ++ L E A + +M+ G
Sbjct: 526 LSLKGV--------------------KPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 390 IEPDEFTYGSLLGA 403
P+ TY +L+ A
Sbjct: 566 TLPNSGTYNTLIRA 579
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 153/407 (37%), Gaps = 87/407 (21%)
Query: 332 NATMTMYSCFGKVNEAQNIFERMEE----RDLVSWNIMISMFFQENLNETAILTYLKMRR 387
N ++ + K + ++ ERM+ DL S+NI+I+ F + + A+ KM +
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 388 VGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWAL-- 445
+G EPD T L+SL+ YC RI+ A+
Sbjct: 144 LGYEPDIVT-------------------------------LSSLLNGYCHGKRISEAVAL 172
Query: 446 --QIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXX 503
Q+F + +++NT+I G + + + ++ +P+ +
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT---------- 222
Query: 504 XXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTIS 559
+G V+G R G +D +L + M ++ D +
Sbjct: 223 -----YGTVVNGLCKR--------------------GDIDLALSLLKKMEKGKIEADVVI 257
Query: 560 WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
+ +I A + +A+ F M + GI P+ T+ ++ + G D +R+ M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 620 VNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL----IKGGYFGANSNICWSLFSACAAHG 675
+ P+V FS ++D + G L EAE+L IK + SL + H
Sbjct: 317 IE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHD 374
Query: 676 NLRLGRMVARLLLEKD--HNNPSVYVLLSNICAAAGQWEEAANLRDM 720
L + + L++ KD N + L+ C A E R+M
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 125/577 (21%), Positives = 240/577 (41%), Gaps = 47/577 (8%)
Query: 178 AFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLIT 236
++L +M+K + YT+ +++ +CS LD ++ +I SG + +LI
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 237 MYFNCGCVVDAYQVFGEV-EAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSP 294
+ DA +V E+ E G+ D YN++I GL + R ++A +M + P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 295 MEAT---FVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIF 351
T F+S S + + + G + + Y GKV EA + +
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 352 ERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
M ++ D ++ ++++ F+ + + A + +MR GI PD F+YG L+ L
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 408 QVVEMVHSLLSKI---GLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISW 459
++ S+ ++ GL V + N L+ +CR+G I A ++ + K L +++
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 460 NTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR 519
TII G+ +G + F + L P+++ + G +
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNK 759
Query: 520 HGFSSEISLGNALVTMYAKCGS-----------LDGSLGVFNAMVKRDTISWNALISAYA 568
G +S + NAL+ K G +DGS F+ K + +++N +I
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS---FDRFGKPNDVTYNIMIDYLC 816
Query: 569 QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPS 628
+ G + A F MQ + + P T+T +L+ +G + +FD + G P
Sbjct: 817 KEGNLEAAKELFHQMQ-NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA-GIEPD 874
Query: 629 VDHFSCIVDLLGRSGYLEEAERLIKGGYFGANS---------NICWSLFSACAAHGNLRL 679
+S I++ + G +A L+ F N+ + C +L S A G + +
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVD-QMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 680 GRMVARLLLEKDH--NNPSVYVLLSNICAAAGQWEEA 714
V ++ + ++ +V L++ C ++ Q EA
Sbjct: 934 AEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 176/404 (43%), Gaps = 30/404 (7%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
L+ T ++++ +++++ ++ + PD + ++ I + + A +F
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSF----LVE 512
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSASTRLGH 141
+ GLK ++ + +S Y +A + AS ++ E+ P+ T +++ + G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 142 VGDALKLFDQMPNRS---NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
V +A + M ++ + + ++ ++ DD A ++FR+M+ G+ PD +++
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD-AEEIFREMRGKGIAPDVFSYG 631
Query: 199 SMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA- 256
+++ + + + ++ G + N L+ + G + A ++ E+
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 257 GLRDH-VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQA 315
GL + VTY +IDG + +AF +F +M+ P + +++ C R+
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC--RLNDVE 749
Query: 316 QAQSI----KTGFDAYTAVNNATMTMYSCFGKVNEAQNI--------FERMEERDLVSWN 363
+A +I K G + TA NA + FGK + F+R + + V++N
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 364 IMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
IMI +E E A + +M+ + P TY SLL D +
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/513 (21%), Positives = 216/513 (42%), Gaps = 70/513 (13%)
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQA---QS 319
TY+ +IDGL ++ R EDA + +M S T+ ++ R A+ +
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLV----SWNIMISMFFQE-NL 374
+ G + + + + + S G + +A+ +F+ M L+ ++ +I + +E N+
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 375 NET-AILTYLKMRRVGIEPDEFTYGSLL----GASDSLQVVEMVHSLLSKIGLMKVEVLN 429
+ +L +K R + I P +TYG+++ + D +V +++ V +
Sbjct: 399 RQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 430 SLIAAYCRNGRINWALQIFSNLPYK----SLISWNTIISGFLTNGCPLQGLEQF-SALLN 484
+LI + +N R A+++ + + + +N++I G L+ + F ++
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG-LSKAKRMDEARSFLVEMVE 515
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEIS---------------LG 529
LKPNA+ +G + GYI F+S L
Sbjct: 516 NGLKPNAF---------------TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQI 585
L+ Y K G + + + +MV + D ++ L++ ++ + +A F M+
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR- 619
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYL 645
GI PD ++ ++++ S +G + + IFD MV G P+V ++ ++ RSG +
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGEI 678
Query: 646 EEAERL-----IKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVL 700
E+A+ L +KG + A + C + C + R+ + L+ + VY
Sbjct: 679 EKAKELLDEMSVKGLHPNAVT-YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 701 LSNICAAAGQWEEAANLRDMMREFGTTKQPGCS 733
L + C E A + FGT K+ GC+
Sbjct: 738 LVDGCCRLNDVERAITI------FGTNKK-GCA 763
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 144/376 (38%), Gaps = 82/376 (21%)
Query: 8 RQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASA 67
++M I+ + I N L+ L+++ + E+ ++ + L+P+ +T I+
Sbjct: 476 KEMKEQGIAPD-IFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYI 533
Query: 68 NTRPAATATTFGNQL-------------------------------HAHAIRTGLKAHSH 96
A+A + ++ + + G+ +
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 97 VANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSASTRLGHVGDALKLFDQM 152
L++ K + + E F E+ PD +S+ +++ ++LG++ A +FD+M
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 153 PNRS---NVAVWNAI-----------------------------ITRCGADNGH---DDV 177
NV ++N + +T C +G+ D+
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 178 A--FDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSV-VIRSGFLARTSVVNSL 234
A F LF +M+ G+ PD + +T+++ C L D R + + G + T+ N+L
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCC-RLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 235 ITMYFNCGCVVDAYQVFGEVEAGLRDH------VTYNAMIDGLVRVDRNEDAFVMFRDMQ 288
I F G +V + G D VTYN MID L + E A +F MQ
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 289 KACFSPMEATFVSVMS 304
A P T+ S+++
Sbjct: 833 NANLMPTVITYTSLLN 848
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 192/462 (41%), Gaps = 30/462 (6%)
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA-GLRDHVTYNAMIDGLV 272
H+ ++R G+ + LI +F + A +V +E G D YNA+I+G
Sbjct: 110 HLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFC 169
Query: 273 RVDRNEDAFVMFRDMQKACFSPMEATF-VSVMSSCS------SLRVGCQAQAQSIKTGFD 325
+++R +DA + M+ FSP T+ + + S CS +L+V Q + + +
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 326 AYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILT 381
YT + ATM G V+EA + + M R D+ ++N +I +E + + A
Sbjct: 230 TYTILIEATMLE----GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 382 YLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMK----VEVLNSLIAAYCR 437
+ G EPD +Y LL A + E L++K+ K V + LI CR
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 438 NGRINWALQIFSNLPYKSLI----SWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYX 493
+G+I A+ + + K L S++ +I+ F G +E +++ P+
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 494 XXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM- 552
++ G + G S S N + + G +L + M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 553 ---VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLV 609
+ D I++N++IS + G EA M+ S P T+ IVL +
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR-SCEFHPSVVTYNIVLLGFCKAHRI 524
Query: 610 DDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
+D + + MV G P+ ++ +++ +G +GY EA L
Sbjct: 525 EDAINVLESMVG-NGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 180/473 (38%), Gaps = 95/473 (20%)
Query: 25 HLLATLTRSNQHTESLKLFTQIHSSHTLR-----------------PDHYTLSTAITASA 67
HLL T+ R + + + I TLR PD + + I
Sbjct: 110 HLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFC 169
Query: 68 NTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDY 127
AT +++ + ++ + SL S L + + ++ P
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 128 SWTTMLSASTRLGHVGDALKLFDQMPNR---SNVAVWNAIITRCGADNGHDDVAFDLFRD 184
++T ++ A+ G V +ALKL D+M +R ++ +N II R G D AF++ R+
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII-RGMCKEGMVDRAFEMVRN 288
Query: 185 MQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCV 244
++ G PD ++ +L LL+ G+ L+T F+ C
Sbjct: 289 LELKGCEPDVISYNILLR----ALLNQGKWEEG--------------EKLMTKMFSEKCD 330
Query: 245 VDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
+ VTY+ +I L R + E+A + + M++ +P ++ +++
Sbjct: 331 PNV--------------VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 305 S-CSS--LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE----R 357
+ C L V + I G N + GK ++A IF ++ E
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLL 417
+ S+N M S + A+ L+M GI+PDE TY
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY-------------------- 476
Query: 418 SKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLP----YKSLISWNTIISGF 466
NS+I+ CR G ++ A ++ ++ + S++++N ++ GF
Sbjct: 477 -----------NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKRD----TISWNALISAYAQHGQGKEAVCCFEAMQI 585
NAL+ + K +D + V + M +D T+++N +I + G+ A+ + +
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL-L 220
Query: 586 SPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYL 645
S +P T+TI++ A G VD+ ++ D M++ G P + ++ I+ + + G +
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS-RGLKPDMFTYNTIIRGMCKEGMV 279
Query: 646 EEAERLIKGGYF-GANSNICWS--LFSACAAHGNLRLG-RMVARLLLEKDHNNPSVYVLL 701
+ A +++ G ++ L A G G +++ ++ EK N Y +L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 702 SNICAAAGQWEEAANLRDMMREFGTT 727
G+ EEA NL +M+E G T
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLT 365
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 122/281 (43%), Gaps = 9/281 (3%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHV 97
E+LKL ++ S L+PD +T +T I A L + +++ +
Sbjct: 246 EALKLMDEMLS-RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 98 ANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNR-- 155
+LL+ E + + F+E P+ +++ +++ R G + +A+ L M +
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 156 -SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML-SLCSVELLDFGR 213
+ ++ +I G DVA + M G PD + ++L +LC D
Sbjct: 365 TPDAYSYDPLIA-AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEA-GLR-DHVTYNAMIDGL 271
+ + G +S N++ + ++ G + A + E+ + G+ D +TYN+MI L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 272 VRVDRNEDAFVMFRDMQKACFSPMEATF-VSVMSSCSSLRV 311
R ++AF + DM+ F P T+ + ++ C + R+
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 115/558 (20%), Positives = 234/558 (41%), Gaps = 61/558 (10%)
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLG 140
Q+ IR LK + N+LL + YP +S ++ +
Sbjct: 152 QIFQKMIRLKLKPNLLTCNTLL---------------IGLVRYPSSFSISSAREVFDDMV 196
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSM 200
+G +L NV +N ++ + +D L R + + V PD T+ ++
Sbjct: 197 KIGVSL----------NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 201 LSLCSVE--LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG- 257
L S + L D + + + ++G + N+L+ Y G + +A+Q+ ++
Sbjct: 247 LKAMSKKGRLSDL-KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 258 -LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQ 316
L D TYN +I+GL + + M+ P T+ +++ C L + +A+
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 317 A---QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEE--------RDLVSWNIM 365
Q G A +N ++ + C + EA + +++E D+V+++ +
Sbjct: 366 KLMEQMENDGVKANQVTHNISLK-WLCKEEKREA--VTRKVKELVDMHGFSPDIVTYHTL 422
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLS---KIGL 422
I + + A+ +M + GI+ + T ++L A + ++ H+LL+ K G
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 423 MKVEV-LNSLIAAYCRNGRINWALQIFSNLPY----KSLISWNTIISGFLTNGCPLQGLE 477
+ EV +LI + R ++ AL+++ + ++ ++N++I G +G +E
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 478 QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYA 537
+F L + L P+ + + ++H F + N L+
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 538 KCGSLDGSLGVFNAMVKR---DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHA 594
K G + +L FN +++ DT+++N +ISA+ + + KEA M+ G+EPD
Sbjct: 603 KEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEME-EKGLEPDRF 661
Query: 595 TFTIVLSACSHVGLVDDG 612
T+ +S L++DG
Sbjct: 662 TYNSFISL-----LMEDG 674
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 171/419 (40%), Gaps = 56/419 (13%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N L+ L + E L+L + S L+PD T +T I + A Q+
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLK-LQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE-----YPDDYSWTTMLSASTR 138
G+KA+ N L K E +V R E+ PD ++ T++ A +
Sbjct: 373 ----NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 139 LGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
+G + AL ++ R+M + G++ + T
Sbjct: 429 VGDLSGAL---------------------------------EMMREMGQKGIKMNTITLN 455
Query: 199 SML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE-A 256
++L +LC LD ++ + + GF+ +LI +F V A +++ E++
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 257 GLRDHV-TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSV-MSSCSSLRV--G 312
+ V T+N++I GL + E A F ++ ++ P ++TF S+ + C RV
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM-EER--DLVSWNIMISMF 369
+ +SIK F N + G +A N F + EER D V++N MIS F
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAF 635
Query: 370 FQENLNETAILTYLKMRRVGIEPDEFTYG---SLLGASDSL-QVVEMVHSLLSKIGLMK 424
++ + A +M G+EPD FTY SLL L + E++ K G MK
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMK 694
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 154/378 (40%), Gaps = 32/378 (8%)
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER-----DLVSWN-IMISMFFQEN 373
+K G N + Y GK+ +A + ERM D V++N I+ +M +
Sbjct: 196 VKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGR 255
Query: 374 LNETAILTYLKMRRVGIEPDEFTYGSL------LGA-SDSLQVVEMVHSLLSKIGLMKVE 426
L++ L L M++ G+ P+ TY +L LG+ ++ Q+VE++ + + L +
Sbjct: 256 LSDLKEL-LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ--TNV-LPDLC 311
Query: 427 VLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQFSAL 482
N LI C G + L++ + L +++NT+I G G L+ + +
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 483 LNTPLKPNAYXXXXXXX-XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGS 541
N +K N ++V + HGFS +I + L+ Y K G
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 542 LDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFT 597
L G+L + M +K +TI+ N ++ A + + EA + G D T+
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH-KRGFIVDEVTYG 490
Query: 598 IVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGY----LEEAERLIK 653
++ V+ ++D M + P+V F+ ++ L G +E+ + L +
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKV-KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 654 GGYFGANSNICWSLFSAC 671
G +S + C
Sbjct: 550 SGLLPDDSTFNSIILGYC 567
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 189/443 (42%), Gaps = 59/443 (13%)
Query: 170 ADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLART 228
A + + D+ LF M+ G+ D Y++ +++ LC V +++ G+
Sbjct: 80 AKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDV 139
Query: 229 SVVNSLITMYFNCGCVVDAYQVFGEVEA-GLR-DHVTYNAMIDGLVRVDRNEDAFVMFRD 286
V+SLI + V DA + ++E G R D V YN +IDG ++ DA +F
Sbjct: 140 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 199
Query: 287 MQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNE 346
M+ R G +A A + N+ + C G+ ++
Sbjct: 200 ME---------------------RDGVRADAVTY-----------NSLVAGLCCSGRWSD 227
Query: 347 AQNIFERMEERDLV----SWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL- 401
A + M RD+V ++ +I +F +E A+ Y +M R ++PD FTY SL+
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 402 -----GASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL 456
G D + +M+ +++K L V N+LI +C++ R++ ++F + + L
Sbjct: 288 GLCMHGRVDEAK--QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 457 ----ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQ 512
I++NTII G+ G P E FS + + +PN
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALV 402
Query: 513 VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYA 568
+ + + +I+ N ++ K G+++ + +F ++ +K D +S+ +IS +
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Query: 569 QHGQGKEAVCCFEAMQISPGIEP 591
+ Q ++ + MQ G+ P
Sbjct: 463 RKRQWDKSDLLYRKMQ-EDGLLP 484
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 166/387 (42%), Gaps = 53/387 (13%)
Query: 19 QILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTF 78
++ ++ L+ + N+ +++ L +++ RPD +T I S A
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEE-MGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196
Query: 79 GNQLHAHAIRTGLKAHSHVANSL---LSLYAKAEDLASVERAFAEIE-YPDDYSWTTMLS 134
+++ R G++A + NSL L + D A + R + P+ ++T ++
Sbjct: 197 FDRME----RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 135 ASTRLGHVGDALKLFDQMPNR---SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR 191
+ G +A+KL+++M R +V +N++I +G D A + M G
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM-HGRVDEAKQMLDLMVTKGCL 311
Query: 192 PDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
PD T+ ++++ C + +D G + + + G + T N++I YF G A ++
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 251 FGEVEAGLRDHV-TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL 309
F +++ R ++ TY+ ++ GL R E A V+F +MQK+
Sbjct: 372 FSRMDS--RPNIRTYSILLYGLCMNWRVEKALVLFENMQKS------------------- 410
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME----ERDLVSWNIM 365
I+ Y V + + G V +A ++F + + D+VS+ M
Sbjct: 411 ---------EIELDITTYNIVIHGMCKI----GNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEP 392
IS F ++ + + L Y KM+ G+ P
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 15/292 (5%)
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFD 180
PD + T++ S ++G V DA++LFD+M R++ +N+++ D A
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA-R 230
Query: 181 LFRDMQKIGVRPDGYTFTSMLSLCSVE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYF 239
L RDM + P+ TFT+++ + E ++ + R NSLI
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 240 NCGCVVDAYQVFGEV--EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEA 297
G V +A Q+ + + L D VTYN +I+G + R ++ +FR+M +
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 298 TFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYS-CFG-KVNEAQNIFERME 355
T+ +++ + G AQ I + D+ + ++ +Y C +V +A +FE M+
Sbjct: 351 TYNTIIQ--GYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 356 ----ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
E D+ ++NI+I + E A + + G++PD +Y +++
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 138/342 (40%), Gaps = 46/342 (13%)
Query: 356 ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHS 415
E D+V+ + +I+ F Q N AI KM +G PD Y +++ S + +V
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 416 LLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFL 467
L ++ V NSL+A C +GR + A ++ ++ + + I++ +I F+
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 468 TNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEIS 527
G + ++ + + + P+ + KQ+ ++ G ++
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315
Query: 528 LGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQG---------- 573
N L+ + K +D +F M +R DTI++N +I Y Q G+
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 574 ----------------------KEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDD 611
++A+ FE MQ S IE D T+ IV+ +G V+D
Sbjct: 376 DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE-IELDITTYNIVIHGMCKIGNVED 434
Query: 612 GTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
+F + + G P V ++ ++ R ++++ L +
Sbjct: 435 AWDLFRSL-SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 130/307 (42%), Gaps = 51/307 (16%)
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL-GASDSLQVVEMVHSL 416
DL S+NI+I+ + + A+ KM + G EPD T SL+ G +V + + L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI-DL 161
Query: 417 LSKIGLM----KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLT 468
+SK+ M V + N++I C+ G +N A+++F + + +++N++++G
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 469 NGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISL 528
+G ++ + PN
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITF---------------------------------- 247
Query: 529 GNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQ 584
A++ ++ K G ++ ++ M +R D ++N+LI+ HG+ EA + M
Sbjct: 248 -TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM- 305
Query: 585 ISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGY 644
++ G PD T+ +++ VD+GT++F M G V ++ I+ ++G
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RGLVGDTITYNTIIQGYFQAGR 364
Query: 645 LEEAERL 651
+ A+ +
Sbjct: 365 PDAAQEI 371
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 145/706 (20%), Positives = 286/706 (40%), Gaps = 123/706 (17%)
Query: 20 ILKLNHLLATLTRSNQHTESL--KLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATT 77
++ N L+ +S T +L +L + +S LRPD T +T ++A + A
Sbjct: 260 LISFNTLINARLKSGGLTPNLAVELLDMVRNS-GLRPDAITYNTLLSACSRDSNLDGAVK 318
Query: 78 FGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTML 133
+ AH + L + N+++S+Y + A ER F E+E +PD ++ ++L
Sbjct: 319 VFEDMEAHRCQPDLWTY----NAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLL 374
Query: 134 SASTRLGHVGDALKLFDQMPNR---SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKI-G 189
A R + +++ QM + +N II G G D+A L++DM+ + G
Sbjct: 375 YAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK-QGQLDLALQLYKDMKGLSG 433
Query: 190 VRPDGYTFTSML-------------SLCSVELLDFG------------------------ 212
PD T+T ++ +L S E+LD G
Sbjct: 434 RNPDAITYTVLIDSLGKANRTVEAAALMS-EMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 213 RHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV--EAGLRDHVTYNAMIDG 270
S ++RSG + ++ + A+ ++ ++ + + Y MI G
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILG 552
Query: 271 LVRVDRNEDAFVMFRDMQKAC-FSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTA 329
L++ +R++D RDM++ C +P+E + V V C L + +I G++
Sbjct: 553 LMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDL--AARQLKVAITNGYELEND 610
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
+ + YS G+ +EA + E ++E S + + E I+ + K+ +
Sbjct: 611 TLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRL---------ITEALIVLHCKVNNLS 661
Query: 390 IEPDEF-----TYGSLLGASDSLQVV-------------EMVHSLLSKIGLMKVE-VLNS 430
DE+ +G G+S + + V S L G E V S
Sbjct: 662 AALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKS 721
Query: 431 LIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPN 490
++ YC+ G A Q+ + K GF P+ ++ ++ K
Sbjct: 722 MVVVYCKLGFPETAHQVVNQAETK----------GFHFACSPM-----YTDIIEAYGKQK 766
Query: 491 AYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFN 550
+ + V G + + G + ++ N+L++ YA+CG + + +FN
Sbjct: 767 LW---------------QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFN 811
Query: 551 AMVK---RDTI-SWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHV 606
M++ T+ S N L+ A G+ +E E +Q G + ++ ++L A +
Sbjct: 812 TMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQ-DMGFKISKSSILLMLDAFARA 870
Query: 607 GLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI 652
G + + +I+ M G++P++ + +++LL + + +AE ++
Sbjct: 871 GNIFEVKKIYSSM-KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMV 915
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 162/408 (39%), Gaps = 63/408 (15%)
Query: 221 RSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVT-----YNAMIDGLVRVD 275
+SG NSL++ Y CGC A +F + +RD + N ++ L
Sbjct: 780 QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM---MRDGPSPTVESINILLHALCVDG 836
Query: 276 RNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATM 335
R E+ +V+ ++Q F +++ + ++ + + R G + + I + A + T+
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSILLMLDAFA--RAGNIFEVKKIYSSMKAAGYL--PTI 892
Query: 336 TMYS------CFGK-VNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLK 384
+Y C GK V +A+ + MEE +L WN M+ M+ + + Y +
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQR 952
Query: 385 MRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWA 444
++ G+EPDE TY N+LI YCR+ R
Sbjct: 953 IKETGLEPDETTY-------------------------------NTLIIMYCRDRRPEEG 981
Query: 445 ---LQIFSNLPY-KSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXX 500
+Q NL L ++ ++IS F C Q + F LL+ LK +
Sbjct: 982 YLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 501 XXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRD 556
+++ + G ++ + L+ Y+ G+ + V + + V+
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELT 1101
Query: 557 TISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACS 604
T+ ++++I AY + + M+ G+EPDH +T + A S
Sbjct: 1102 TLPYSSVIDAYLRSKDYNSGIERLLEMK-KEGLEPDHRIWTCFVRAAS 1148
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 135/334 (40%), Gaps = 48/334 (14%)
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQEN-LNETAILTYLK 384
V NA M +YS GK ++AQ + + M +R DL+S+N +I+ + L + L
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 385 M-RRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINW 443
M R G+ PD TY N+L++A R+ ++
Sbjct: 287 MVRNSGLRPDAITY-------------------------------NTLLSACSRDSNLDG 315
Query: 444 ALQIFSNLP----YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
A+++F ++ L ++N +IS + G + F L P+A
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 500 XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMV-----K 554
K+V+ + + GF + N ++ MY K G LD +L ++ M
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 555 RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTR 614
D I++ LI + + + EA M + GI+P T++ ++ + G ++
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEM-LDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA 648
F M+ G P +S ++D+L R +A
Sbjct: 495 TFSCMLR-SGTKPDNLAYSVMLDVLLRGNETRKA 527
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 124/293 (42%), Gaps = 25/293 (8%)
Query: 129 WTTMLSASTRLGHVGDALKLFDQMPNR---SNVAVWNAII-TRCGADNGHDDVAFDLFRD 184
+ M+ +R G A +L D M R ++ +N +I R + ++A +L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 185 MQKIGVRPDGYTFTSMLSLCSVEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGC 243
++ G+RPD T+ ++LS CS + LD V + N++I++Y CG
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 244 VVDAYQVFGEVEAG--LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVS 301
+A ++F E+E D VTYN+++ R E +++ MQK F E T+ +
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 302 VMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMT---MYSCFGKVN---EAQNIFE 352
++ G Q Q A + + N +T + GK N EA +
Sbjct: 408 IIHM-----YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 353 RMEE----RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLL 401
M + L +++ +I + + E A T+ M R G +PD Y +L
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 110/239 (46%), Gaps = 11/239 (4%)
Query: 424 KVEVLNSLIAAYCRNGRINWALQIFSNLPYK----SLISWNTIISGFLTNG--CPLQGLE 477
+V+V N+++ Y R+G+ + A ++ + + LIS+NT+I+ L +G P +E
Sbjct: 224 RVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 478 QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYA 537
+ N+ L+P+A +V + H ++ NA++++Y
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 538 KCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDH 593
+CG + +F + + D +++N+L+ A+A+ ++ ++ MQ G D
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ-KMGFGKDE 402
Query: 594 ATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI 652
T+ ++ G +D +++ M + G P ++ ++D LG++ EA L+
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM 461
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 166/406 (40%), Gaps = 63/406 (15%)
Query: 247 AYQVFGEVEAGLRDHV-TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS 305
A ++F E + D V YNAM+ R + A + M++ P +F +++++
Sbjct: 210 AVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINA 269
Query: 306 CSSLRVGCQAQAQSIK-------TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME--- 355
L+ G +++ +G N ++ S ++ A +FE ME
Sbjct: 270 --RLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR 327
Query: 356 -ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSLQVVE 411
+ DL ++N MIS++ + L A ++++ G PD TY SLL A + + V+
Sbjct: 328 CQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
Query: 412 MVHSLLSKIGLMKVEV-LNSLIAAYCRNGRINWALQIFSNLPYKS-----LISWNTIISG 465
V+ + K+G K E+ N++I Y + G+++ ALQ++ ++ S I++ +I
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 466 FLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSE 525
++ S +L+ +KP
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPT----------------------------------- 472
Query: 526 ISLGNALVTMYAKCGSLDGSLGVFNAMV----KRDTISWNALISAYAQHGQGKEAVCCFE 581
+ +AL+ YAK G + + F+ M+ K D ++++ ++ + + ++A +
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYR 532
Query: 582 AMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVP 627
M IS G P + + +++ DD + M + G P
Sbjct: 533 DM-ISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 110/271 (40%), Gaps = 40/271 (14%)
Query: 157 NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSML-SLCSVELLDFGRHV 215
++ WN++++ A G + A +F M + G P + +L +LC L+ V
Sbjct: 786 DLKTWNSLMS-AYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 216 HSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVEAG--LRDHVTYNAMIDGLVR 273
+ GF S + ++ + G + + +++ ++A L Y MI+ L +
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 274 VDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNA 333
R DA +M +M++A F A+ N+
Sbjct: 905 GKRVRDAEIMVSEMEEA--------------------------------NFKVELAIWNS 932
Query: 334 TMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVG 389
+ MY+ + +++R++E D ++N +I M+ ++ E L +MR +G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 390 IEPDEFTYGSLLGASDSLQVVEMVHSLLSKI 420
++P TY SL+ A + +E L ++
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 213/498 (42%), Gaps = 59/498 (11%)
Query: 176 DVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSL 234
D+ M+ +GV + YT+ M++ LC L F + +++ G+ +NSL
Sbjct: 82 DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSL 141
Query: 235 ITMYFNCGCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACF 292
+ + + + +A + + VE G + D VT+ ++ GL + ++ +A + M
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM----- 196
Query: 293 SPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFE 352
+ GCQ + Y AV N G+ + A N+
Sbjct: 197 ----------------VVKGCQPDLVT-------YGAVINGLCKR----GEPDLALNLLN 229
Query: 353 RME----ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA----- 403
+ME E D+V ++ +I + + A+ + +M GI PD FTY SL+
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 404 --SDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----I 457
SD+ + ++ +L + V NSLI A+ + G++ A ++F + +S+ +
Sbjct: 290 RWSDASR---LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 458 SWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYI 517
++N++I+GF + + + F+ +++ P+ G ++ +
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 518 LRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQG 573
R G L+ + + D + VF MV + +++N L+ ++G+
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 574 KEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFS 633
++A+ FE +Q S +EPD T+ I+ G V+DG +F +++ G P V ++
Sbjct: 467 EKAMVVFEYLQKSK-MEPDIYTYNIMSEGMCKAGKVEDGWDLF-CSLSLKGVKPDVIAYN 524
Query: 634 CIVDLLGRSGYLEEAERL 651
++ + G EEA L
Sbjct: 525 TMISGFCKKGLKEEAYTL 542
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 212/488 (43%), Gaps = 63/488 (12%)
Query: 6 FSRQMSTTTISSEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITA 65
F +M +S + N ++ L R +Q + +L + ++ P TL++ +
Sbjct: 87 FGEKMEILGVS-HNLYTYNIMINCLCRRSQLSFALAILGKMMKL-GYGPSIVTLNSLLNG 144
Query: 66 SANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPD 125
+ + A +Q+ + + + + L +E +A VER + PD
Sbjct: 145 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 204
Query: 126 DYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLF 182
++ +++ + G AL L ++M ++V +++ +I H D A +LF
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL-CKYRHVDDALNLF 263
Query: 183 RDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLART---SVV--NSLITM 237
+M G+RPD +T++S++S L ++GR + + S L R +VV NSLI
Sbjct: 264 TEMDNKGIRPDVFTYSSLISC----LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 238 YFNCGCVVDAYQVFGEVEAGLRDH--VTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSP 294
+ G +++A ++F E+ D VTYN++I+G DR ++A +F M K C P
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-P 378
Query: 295 MEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM 354
T+ ++++ C+A+ KV + +F M
Sbjct: 379 DVVTYNTLINGF------CKAK--------------------------KVVDGMELFRDM 406
Query: 355 EERDL----VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSL 407
R L V++ +I FFQ + + A + + +M G+ P+ TY +LL + L
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 408 QVVEMVHSLLSKIGLM-KVEVLNSLIAAYCRNGRINWALQIFSNLPYK----SLISWNTI 462
+ +V L K + + N + C+ G++ +F +L K +I++NT+
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 463 ISGFLTNG 470
ISGF G
Sbjct: 527 ISGFCKKG 534
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 172/386 (44%), Gaps = 48/386 (12%)
Query: 30 LTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRT 89
L + + +L L ++ + D ST I + R A ++ IR
Sbjct: 215 LCKRGEPDLALNLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 90 GLKAHSHVANSLLSLYAKAEDLASVERAFAEIEY-PDDYSWTTMLSASTRLGHVGDALKL 148
+ +S + + L + Y + D + + E + P+ ++ +++ A + G + +A KL
Sbjct: 274 DVFTYSSLISCLCN-YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 149 FDQMPNRS---NVAVWNAIITRCGADNG---HD--DVAFDLFRDMQKIGVRPDGYTFTSM 200
FD+M RS N+ +N++I NG HD D A +F M PD T+ ++
Sbjct: 333 FDEMIQRSIDPNIVTYNSLI------NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 201 LS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE-VEAGL 258
++ C + + G + + R G + T +LI +F +A VF + V G+
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 259 RDHV-TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQA 317
++ TYN ++DGL + + E A V+F +QK+ P T+ ++MS +A
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY-NIMSEG-------MCKA 498
Query: 318 QSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNET 377
++ G+D + +++ + + D++++N MIS F ++ L E
Sbjct: 499 GKVEDGWDLFCSLSLKGV--------------------KPDVIAYNTMISGFCKKGLKEE 538
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGA 403
A ++KM+ G PD TY +L+ A
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 114/582 (19%), Positives = 232/582 (39%), Gaps = 82/582 (14%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHV 97
E++ LF ++ S P S ++A A + +FG ++ + L ++ +
Sbjct: 48 EAVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 98 ANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPN--- 154
N L + LA + + P + ++L+ + +A+ L DQM
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 155 RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGR 213
+ + + ++ N + A L M G +PD T+ ++++ LC D
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASE-AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE-AGLR-DHVTYNAMIDGL 271
++ + + + A + +++I V DA +F E++ G+R D TY+++I L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 272 VRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQA---QSIKTGFDAYT 328
R DA + DM + +P TF S++ + + +A+ + I+ D
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 329 AVNNATMTMYSCFGKVNEAQNIFERMEERD----LVSWNIMISMFFQENLNETAILTYLK 384
N+ + + +++EAQ IF M +D +V++N +I+ F + + +
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 385 MRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWA 444
M R G+ + TY +L +H A+ C N ++ +
Sbjct: 406 MSRRGLVGNTVTYTTL------------IHGFFQ--------------ASDCDNAQMVFK 439
Query: 445 LQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXX 504
Q+ S+ + +++++NT++ G NG + + F L + ++P+ Y
Sbjct: 440 -QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN--------- 489
Query: 505 XXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISW 560
I+ G K G ++ +F ++ VK D I++
Sbjct: 490 ------------IMSEGM--------------CKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 561 NALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSA 602
N +IS + + G +EA F M+ G PD T+ ++ A
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMK-EDGPLPDSGTYNTLIRA 564
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 158/383 (41%), Gaps = 24/383 (6%)
Query: 357 RDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSL 416
R+ +S N ++ + E A+ + +M + P + LL A ++ ++V S
Sbjct: 33 REKLSRNALLHLKLDE-----AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISF 87
Query: 417 LSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSN---LPY-KSLISWNTIISGFLT 468
K+ ++ V N +I CR ++++AL I L Y S+++ N++++GF
Sbjct: 88 GEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH 147
Query: 469 NGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISL 528
+ + ++ +P+ + ++ G ++
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 529 GNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQ 584
A++ K G D +L + N M ++ D + ++ +I + ++ +A+ F M
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 585 ISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGY 644
+ GI PD T++ ++S + G D +R+ M+ P+V F+ ++D + G
Sbjct: 268 -NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGK 325
Query: 645 LEEAERLIKGGY-FGANSNICW--SLFSACAAHGNLRLGRMVARLLLEKD--HNNPSVYV 699
L EAE+L + NI SL + H L + + L++ KD + +
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 700 LLSNICAAAGQWEEAANLRDMMR 722
L++ C A + RDM R
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSR 408
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/505 (19%), Positives = 205/505 (40%), Gaps = 27/505 (5%)
Query: 123 YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRS---NVAVWNAIITRCGADNGHDDVAF 179
+P ++ +LSA ++ + L +QM N N+ + +I+ C +A
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY-SILINCFCRRSQLSLAL 136
Query: 180 DLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMY 238
+ M K+G PD T S+L+ C + + ++ G+ + N+LI
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 239 FNCGCVVDAYQVFGE--VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSP-- 294
F +A + V+ D VTY +++GL + + A + + M++ P
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 295 -MEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
+ T + + + ++ + G N+ + +G+ ++A +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 354 MEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDS 406
M ER ++V+++ +I F +E A Y +M + I+PD FTY SL+ D
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 407 L-QVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNT 461
L + M ++SK V N+LI +C+ R++ +++F + + L +++ T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 462 IISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG 521
+I GF F +++ + P+ V Y+ R
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 522 FSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAV 577
+I N ++ K G ++ +F ++ VK + +++ ++S + + G +EA
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 578 CCFEAMQISPGIEPDHATFTIVLSA 602
F M+ G PD T+ ++ A
Sbjct: 557 ALFREMK-EEGPLPDSGTYNTLIRA 580
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 125/569 (21%), Positives = 242/569 (42%), Gaps = 79/569 (13%)
Query: 116 RAFAEIEYPDDYSWTTMLSASTRLG--HVGDALKLF-DQMPNRS--NVAVWNAIITRCGA 170
R F+ + Y DY ++ RL + DA+ LF D + +R ++ ++ +++
Sbjct: 40 RDFSGVRY--DYRKISI----NRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAK 93
Query: 171 DNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTS 229
N D + L MQ +G+ + YT++ +++ C L V + +++ G+
Sbjct: 94 MNKFD-LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIV 152
Query: 230 VVNSLITMYFNCGCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMF-RD 286
+NSL+ + + + DA + G+ VE G + D T+N +I GL R +R +A + R
Sbjct: 153 TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 287 MQKACFSPMEATFVSVMSSCS------SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSC 340
+ K C + + V C +L + + + I+ G Y + +A
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN---- 268
Query: 341 FGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFT 396
+ VN+A N+F M+ + ++V++N +I A M I P+ T
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 397 YGSLLGA----SDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIF---- 448
+ +L+ A ++ ++ ++ + + +SLI +C + R++ A +F
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 449 SNLPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXX 508
S + +++++NT+I GF +G+E F + L
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV-------------------- 428
Query: 509 HGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALI 564
G V L HGF NA + VF MV D ++++ L+
Sbjct: 429 -GNTVTYTTLIHGFFQARECDNAQI--------------VFKQMVSDGVLPDIMTYSILL 473
Query: 565 SAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYG 624
+G+ + A+ FE +Q S +EPD T+ I++ G V+DG +F +++ G
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLF-CSLSLKG 531
Query: 625 FVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
P+V ++ ++ R G EEA+ L +
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 200/448 (44%), Gaps = 42/448 (9%)
Query: 54 PDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAK----AE 109
PD TL++ + + + A + Q+ + G + S N+L+ + +E
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQM----VEMGYQPDSFTFNTLIHGLFRHNRASE 204
Query: 110 DLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAII- 165
+A V+R + PD ++ +++ + G + AL L +M V ++N II
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 166 TRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFL 225
C N +D A +LF +M G+RP+ T+ S++ L ++GR + + S +
Sbjct: 265 ALCNYKNVND--ALNLFTEMDNKGIRPNVVTYNSLIRC----LCNYGRWSDASRLLSDMI 318
Query: 226 ARTSVVN-----SLITMYFNCGCVVDAYQVFGEV--EAGLRDHVTYNAMIDGLVRVDRNE 278
R N +LI + G +V+A +++ E+ + D TY+++I+G DR +
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 279 DAFVMFRDM-QKACFSPMEATFVSVMSS-CSSLRV--GCQAQAQSIKTGFDAYTAVNNAT 334
+A MF M K CF P T+ +++ C + RV G + + + G T
Sbjct: 379 EAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 335 MTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGI 390
+ + + + AQ +F++M D+++++I++ ETA++ + ++R +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 391 EPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQ 446
EPD +TY ++ VE L + L V+ ++++ +CR G A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 447 IFSNL----PYKSLISWNTIISGFLTNG 470
+F + P ++NT+I L +G
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 184/444 (41%), Gaps = 72/444 (16%)
Query: 19 QILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTF 78
I+ LN LL N+ ++++ L Q+ +PD +T +T I A+ A
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQM-VEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 79 GNQLHAHAIRTGLKAHSHVANSL---------LSLYAKAEDLASVERAFAEIEYPDDYSW 129
+++ + L + V N L LSL K E +IE P +
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ--------GKIE-PGVVIY 259
Query: 130 TTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGH------------ 174
T++ A +V DAL LF +M N R NV +N++I RC + G
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI-RCLCNYGRWSDASRLLSDMI 318
Query: 175 ------DDVAF-----------------DLFRDMQKIGVRPDGYTFTSMLS-LCSVELLD 210
+ V F L+ +M K + PD +T++S+++ C + LD
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 211 FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV-EAGL-RDHVTYNAMI 268
+H+ ++I N+LI + V + ++F E+ + GL + VTY +I
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 269 DGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS-CSSLRVGCQ----AQAQSIKTG 323
G + ++A ++F+ M P T+ ++ C++ +V Q K
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 324 FDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAI 379
D YT N + GKV + ++F + + ++V++ M+S F ++ L E A
Sbjct: 499 PDIYTY--NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 380 LTYLKMRRVGIEPDEFTYGSLLGA 403
+ +M+ G PD TY +L+ A
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRA 580
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 157/400 (39%), Gaps = 60/400 (15%)
Query: 343 KVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYG 398
K+++A N+F M + +V ++ ++S + N + I +M+ +GI + +TY
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 399 SLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLP-- 452
L+ + + ++L+K+ + E LNSL+ +C RI+ A+ + +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 453 --YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHG 510
++NT+I G + + + ++ +P+ +G
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD---------------LVTYG 225
Query: 511 KQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISA 566
V+G R G +D +L + M ++ + +N +I A
Sbjct: 226 IVVNGLCKR--------------------GDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
+ +A+ F M + GI P+ T+ ++ + G D +R+ M+
Sbjct: 266 LCNYKNVNDALNLFTEMD-NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE-RKIN 323
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERL----IKGGYFGANSNICWSLFSACAAHGNLRLGRM 682
P+V FS ++D + G L EAE+L IK + SL + H L +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 683 VARLLLEKD--HNNPSVYVLLSNICAAAGQWEEAANLRDM 720
+ L++ KD N + L+ C A E R+M
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 128/627 (20%), Positives = 255/627 (40%), Gaps = 69/627 (11%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N+L+A L RS H + + ++ + T + +LS + R T F +
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTF-INFVSLSGLLECYVQMRK----TGFAFGVL 130
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSASTRL 139
A ++ G + + N LL + + E+ PD +S+ T++
Sbjct: 131 ALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEG 190
Query: 140 GHVGDALKLFDQMPNRS---NVAVWNAIITR-CGADNGHDDVAFDLFRDMQKIGVRPDGY 195
+ AL+L ++M ++ W +I C A G D A ++M+ +G+ D
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKA--GKMDEAMGFLKEMKFMGLEADLV 248
Query: 196 TFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG-E 253
+TS++ C LD G+ + V+ G N+LI + G + +A ++F
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 254 VEAGLRDHV-TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVG 312
+E G+R +V TY +IDGL V + ++A + M + P T+ +++
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL------ 362
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMIS- 367
C+ G V +A I E M++R D +++NI++
Sbjct: 363 CKD--------------------------GLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 368 MFFQENLNETAILTYLKMRRVG-IEPDEFTYGSL---LGASDSL-QVVEMVHSLLSKIGL 422
+ + +L+E + L YL ++ +PD +Y +L L + L Q +++ L+ K+G
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 423 MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLI----SWNTIISGFLTNGCPLQGLEQ 478
N L+ + + G +N A++++ + ++ ++ +I GF G
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAK 538
+ + L+P+ + ++ + R ++ N ++ K
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 539 CGSLDGS----LGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHA 594
G + + +G+ A + D +++ LI+ + + G EA+ F+ M + G EPD
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM-VDSGFEPDAH 635
Query: 595 TFTIVLSACSHVGLVDDGTRIFDMMVN 621
VL C G D T + +V+
Sbjct: 636 ICDSVLKYCISQGETDKLTELVKKLVD 662
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 169/431 (39%), Gaps = 71/431 (16%)
Query: 246 DAYQVFGE-VEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
+A VF + V++G N ++ LVR +E AF +R M + TF++ +S
Sbjct: 56 NAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLET------DTFINFVS 109
Query: 305 SCSSLRVGCQAQ---------AQSIKTGFDAYTAVNNATMTMYSCFG-KVNEAQNIFERM 354
L Q + A +K GF A+ N+ + C + +A ++ M
Sbjct: 110 LSGLLECYVQMRKTGFAFGVLALMLKRGF-AFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 355 EER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVV 410
D+ S+N +I F + E A+ +M+ G T+G L+ A +
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 411 EMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKS----LISWNTI 462
+ L ++ M +E V SLI +C G ++ +F + + I++NT+
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 463 ISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
I GF G + E F ++ ++PN Y
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTY---------------------------- 320
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRD----TISWNALISAYAQHGQGKEAVC 578
L+ G +L + N M+++D +++N +I+ + G +AV
Sbjct: 321 -------TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 579 CFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV-PSVDHFSCIVD 637
E M+ PD+ T+ I+L G +D+ +++ +M+ + P V ++ ++
Sbjct: 374 IVELMK-KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 638 LLGRSGYLEEA 648
L + L +A
Sbjct: 433 GLCKENRLHQA 443
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 116/537 (21%), Positives = 223/537 (41%), Gaps = 61/537 (11%)
Query: 141 HVGDALKLFDQMPNRSNVAVWNAIITRCGA--DNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
V DA+ LF+ M + C A D+ + M+ G+ D YT T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 199 SMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE-VEA 256
M++ C + L F V + G+ T ++L+ + G V +A + VE
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 257 GLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQA 315
R D VT + +I+GL R +A V+ M + F P E T+ V++
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN----------- 218
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL----VSWNIMISMFFQ 371
+ K+G A A ++F +MEER++ V ++I+I +
Sbjct: 219 --RLCKSGNSAL-------------------ALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 372 ENLNETAILTYLKMRRVGIEPDEFTYGSLLGA--SDSL--QVVEMVHSLLSKIGLMKVEV 427
+ + A+ + +M GI+ D TY SL+G +D +M+ ++ + + V
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 428 LNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQFSALL 483
++LI + + G++ A ++++ + + + I++N++I GF C + + F ++
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 484 NTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLD 543
+ +P+ G ++ I G N LV + + G L+
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 544 GSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQ---ISPGIEPDHATF 596
+ +F MV R +++ L+ +G+ +A+ FE MQ ++ GI +
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI----GIY 493
Query: 597 TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIK 653
I++ + VDD +F + + G P V ++ ++ L + G L EA+ L +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSD-KGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 128/640 (20%), Positives = 254/640 (39%), Gaps = 126/640 (19%)
Query: 21 LKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGN 80
+ N L + + R+ Q+ L F + + + D YT++ I + F
Sbjct: 71 IDFNRLCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMTIMINCYCRKK----KLLFAF 125
Query: 81 QLHAHAIRTGLKAHSHVANSLLSLYA----KAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
+ A + G + + ++L++ + +E +A V+R + PD + +T+++
Sbjct: 126 SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 185
Query: 137 TRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
G V +AL L D+M + + + ++ R +G+ +A DLFR M++
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL-CKSGNSALALDLFRKMEE------ 238
Query: 194 GYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE 253
R++ + V++ V++SL G DA +F E
Sbjct: 239 -------------------RNIKASVVQYSI-----VIDSLC----KDGSFDDALSLFNE 270
Query: 254 VE-AGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATF---VSVMSSCSS 308
+E G++ D VTY+++I GL + +D M R+M P TF + V
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 309 LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME----ERDLVSWNI 364
L + + I G T N+ + + ++EA +F+ M E D+V+++I
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 365 MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMK 424
+I+ + + + + + ++ G+ P+ TY
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITY--------------------------- 423
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYK----SLISWNTIISGFLTNGCPLQGLEQFS 480
N+L+ +C++G++N A ++F + + S++++ ++ G NG + LE F
Sbjct: 424 ----NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 481 ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
+ + + G ++ I+ HG + + +A
Sbjct: 480 KMQKSRM--------------------TLGIGIYNIII-HGMCNASKVDDAW-------- 510
Query: 541 SLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
SL SL + VK D +++N +I + G EA F M+ G PD T+ I++
Sbjct: 511 SLFCSLS--DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK-EDGCTPDDFTYNILI 567
Query: 601 SA-CSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLL 639
A GL+ I +M + GF ++D+L
Sbjct: 568 RAHLGGSGLISSVELIEEM--KVCGFSADSSTIKMVIDML 605
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 133/628 (21%), Positives = 257/628 (40%), Gaps = 66/628 (10%)
Query: 129 WTTMLSASTRLGHVGDALKLFDQMP---NRSNVAVWNAIITRCGADNGHDDVAFDLFRDM 185
+ ++ R G + D+L++F M +V NAI+ +G D + ++M
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV-VKSGEDVSVWSFLKEM 224
Query: 186 QKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCV 244
K + PD TF +++ LC+ + ++ + +SG+ N+++ Y G
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 245 VDAYQVFGEVEA-GLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSV 302
A ++ +++ G+ D TYN +I L R +R +++ RDM+K P E T+ ++
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 303 MSSCSS---LRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDL 359
++ S+ + + Q + + G NA + + G EA +F ME + L
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404
Query: 360 ----VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSL---LGASDSLQVVEM 412
VS+ +++ + + A Y++M+R G+ TY + L + L +
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 413 VHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTII-SGFLTNG 470
+ + +SK G+ + ++LI +C+ GR A +I + Y+ +S N II S + N
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI-YRVGLSPNGIIYSTLIYNC 523
Query: 471 CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN 530
C + L++ +++ ++ G + + N
Sbjct: 524 CRMGCLKE-------------------------------AIRIYEAMILEGHTRDHFTFN 552
Query: 531 ALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQIS 586
LVT K G + + M + +T+S++ LI+ Y G+G +A F+ M
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT-K 611
Query: 587 PGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLE 646
G P T+ +L G + + + + + V +V ++ ++ + +SG L
Sbjct: 612 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV-MYNTLLTAMCKSGNLA 670
Query: 647 EAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHN-------NPSVYV 699
+A L G S + S G R G+ V +L K+ N +Y
Sbjct: 671 KAVSLF--GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 700 LLSNICAAAGQWEEAANLRDMMREFGTT 727
+ AGQW+ R+ M G T
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHT 756
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 185/437 (42%), Gaps = 38/437 (8%)
Query: 38 ESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHV 97
E++ L ++ S + PD T S I TA ++ R GL + +
Sbjct: 461 EAVVLLNEM-SKDGIDPDIVTYSALINGFCKVGRFKTA----KEIVCRIYRVGLSPNGII 515
Query: 98 ANSLL----SLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMP 153
++L+ + E + E E D +++ ++++ + G V +A + M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 154 NRS---NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCS---- 205
+ N ++ +I G ++G AF +F +M K+G P +T+ S+L LC
Sbjct: 576 SDGILPNTVSFDCLINGYG-NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 206 VELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV--EAGLRDHVT 263
E F + +H+V T + N+L+T G + A +FGE+ + L D T
Sbjct: 635 REAEKFLKSLHAVPAA----VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQ-KACFSP---MEATFVSVMSSCSSLRVGCQAQAQS 319
Y ++I GL R + A + ++ + + P M FV M + G + Q
Sbjct: 691 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 750
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERD----LVSWNIMISMFFQENLN 375
G NA + YS GK+ + ++ M ++ L ++NI++ + +
Sbjct: 751 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 810
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSL-LGASDSLQVVEMVHSLLSKIGLMKVEV----LNS 430
T+ L Y + GI PD+ T SL LG +S ++E+ +L VEV N
Sbjct: 811 STSFLLYRSIILNGILPDKLTCHSLVLGICES-NMLEIGLKILKAFICRGVEVDRYTFNM 869
Query: 431 LIAAYCRNGRINWALQI 447
LI+ C NG INWA +
Sbjct: 870 LISKCCANGEINWAFDL 886
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 177/371 (47%), Gaps = 31/371 (8%)
Query: 124 PDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFD 180
PD ++ T++ TR + +A + +M +V +N++I+ A N +
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISG-AAKNLMLNRVLQ 104
Query: 181 LFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRH------VHSVVIRSGFLARTSVVNSL 234
LF +M G+ PD +++ +++S C +L GRH +H + +G + N L
Sbjct: 105 LFDEMLHSGLSPDMWSYNTLMS-CYFKL---GRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 235 ITMYFNCGCVVDAYQVFGEVEAGLRDHV-TYNAMIDGLVRVDRNEDAFVMFRDMQKACFS 293
+ G +A ++F +++ ++ + TYN +I+GL + R M R+++K+ ++
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYT 220
Query: 294 PMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
P T+ +++ + + +K + YT A + S K A+ +E
Sbjct: 221 PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYEC 280
Query: 354 MEE--------RDLVSWNIMISMFFQE-NLNET-AILTYLKMRRVGIEPDEFTYGSLLGA 403
M E +D+VS+N +++++F++ NL+ +L ++M+ G++PD++T+ ++
Sbjct: 281 MHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK--GLKPDDYTHTIIVNG 338
Query: 404 SDSLQVVEMVHSLLSKIGLM----KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISW 459
++ L+ IG M V N LI C+ G ++ A+++F+++ + ++
Sbjct: 339 LLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTY 398
Query: 460 NTIISGFLTNG 470
+++ +G
Sbjct: 399 TSVVHNLCKDG 409
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 153/337 (45%), Gaps = 19/337 (5%)
Query: 332 NATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRR 387
N + Y+ F ++EA + RM E D+ ++N +IS + + + + +M
Sbjct: 52 NTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLH 111
Query: 388 VGIEPDEFTYGSLLGASDSL----QVVEMVHSLLSKIGLMK-VEVLNSLIAAYCRNGRIN 442
G+ PD ++Y +L+ L + +++H + GL+ ++ N L+ A C++G +
Sbjct: 112 SGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTD 171
Query: 443 WALQIFSNLPYK---SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
A+++F +L + L+++N +I+G + L + PNA
Sbjct: 172 NAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLK 231
Query: 500 XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK----- 554
G Q+ + + G++ + A+V+ K G + + + +V+
Sbjct: 232 MYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRS 291
Query: 555 RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTR 614
+D +S+N L++ Y + G E +++ G++PD T TI+++ ++G G
Sbjct: 292 QDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK-GLKPDDYTHTIIVNGLLNIGNTG-GAE 349
Query: 615 IFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
+ G PSV +C++D L ++G+++ A RL
Sbjct: 350 KHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 518 LRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHGQG 573
+R G ++ N L+ Y + +D + V M ++ D ++N+LIS A++
Sbjct: 40 IRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLML 99
Query: 574 KEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFS 633
+ F+ M + G+ PD ++ ++S +G + +I +++ G VP +D ++
Sbjct: 100 NRVLQLFDEM-LHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYN 158
Query: 634 CIVDLLGRSGYLEEAERLIK 653
++D L +SG+ + A L K
Sbjct: 159 ILLDALCKSGHTDNAIELFK 178
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 115/567 (20%), Positives = 240/567 (42%), Gaps = 57/567 (10%)
Query: 128 SWTTMLSASTRLGHVGDALKLFDQMPNRSNVAV----WNAIITRCGADNGHDDVAFDLFR 183
++ T++ + G + DA LF +M +S V + +N +I CG +GH A L +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEML-KSGVPIDTVTFNTMIHTCGT-HGHLSEAESLLK 364
Query: 184 DMQKIGVRPDGYTFTSMLSLCS----VEL-LDFGRHVHSVVIRSGFLARTSVVNSLITMY 238
M++ G+ PD T+ +LSL + +E L++ R + V + + +V++ L
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR- 423
Query: 239 FNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEAT 298
++ EVEA + + M +R+D + +M + + +A
Sbjct: 424 ----------KMVAEVEAVIAE------MDRNSIRIDEHSVPVIMQMYVNEGLVVQAKAL 467
Query: 299 FVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERD 358
F ++ C + ++ D Y +GK N + + D
Sbjct: 468 F-------ERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSG------QRND 514
Query: 359 LVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLS 418
++ +N+MI + + L+E A+ + M+ G PDE TY SL + +V+ +L+
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 419 KI---GLMK-VEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNG 470
++ G + ++IA+Y R G ++ A+ ++ + + + + ++I+GF +G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 471 CPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGN 530
+ ++ F + ++ N ++V+ + +++ N
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN 694
Query: 531 ALVTMYAKCGSLDGSLGVFNAMVKR---DTISWNALISAYAQHGQGKEAVCCFEAMQISP 587
+++++ A G + + +FNA+ ++ D IS+ ++ Y G EA+ E M+ S
Sbjct: 695 SMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRES- 753
Query: 588 GIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEE 647
G+ D +F V++ + G + + +F M+ + F + LL + G E
Sbjct: 754 GLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSE 813
Query: 648 AERLIKGGYFGAN----SNICWSLFSA 670
A ++ Y A I +LFSA
Sbjct: 814 AVSQLQTAYNEAKPLATPAITATLFSA 840
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 177/424 (41%), Gaps = 60/424 (14%)
Query: 99 NSLLSLYAKAEDLASVERAFAEI---EYP-DDYSWTTMLSASTRLGHVGDALKLFDQMPN 154
N+L+ LY KA L F+E+ P D ++ TM+ GH+ +A L +M
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 155 R---SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLD 210
+ + +N I+ AD G + A + +R ++K+G+ PD T ++L LC +++
Sbjct: 369 KGISPDTKTYN-ILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 211 FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE----------------- 253
V + + R+ V ++ MY N G VV A +F
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVID 487
Query: 254 --VEAGL------------------RDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFS 293
E GL D + YN MI + +E A +F+ M+
Sbjct: 488 VYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTW 547
Query: 294 PMEATFVSVMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNI 350
P E T+ S+ + + + +AQ A+ + +G A + Y G +++A ++
Sbjct: 548 PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDL 607
Query: 351 FERMEERDL----VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDS 406
+E ME+ + V + +I+ F + + E AI + M G++ + SL+ A
Sbjct: 608 YEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSK 667
Query: 407 LQVVEMVHSLLSKI----GLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYK---SLISW 459
+ +E + K+ G V NS+++ G ++ A IF+ L K +IS+
Sbjct: 668 VGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISF 727
Query: 460 NTII 463
T++
Sbjct: 728 ATMM 731
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/486 (20%), Positives = 202/486 (41%), Gaps = 61/486 (12%)
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKT 322
T+N +ID + R DA +F +M K+ TF +++ +C +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGT-------------- 352
Query: 323 GFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETA 378
G ++EA+++ ++MEE+ D ++NI++S+ E A
Sbjct: 353 ------------------HGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAA 394
Query: 379 ILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEV----LNSLIAA 434
+ Y K+R+VG+ PD T+ ++L ++V V ++++++ + + + ++
Sbjct: 395 LEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQM 454
Query: 435 YCRNGRINWALQIFSNLPYKSLISWNT---IISGFLTNGCPLQGLEQFSALLNTPLKPNA 491
Y G + A +F ++S T +I + G ++ F N + N
Sbjct: 455 YVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRND 514
Query: 492 YXXXXXXXXXXXXXXXXHGKQVHGY--ILRHGFSSEISLGNALVTMYAKCGSLDGSLGVF 549
H K + + + G + N+L M A +D + +
Sbjct: 515 -VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 550 NAMV----KRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSH 605
M+ K ++ A+I++Y + G +AV +EAM+ + G++P+ + +++ +
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKT-GVKPNEVVYGSLINGFAE 632
Query: 606 VGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI------KGGYFGA 659
G+V++ + F MM +G + + ++ + G LEEA R+ +GG A
Sbjct: 633 SGMVEEAIQYFRMMEE-HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA 691
Query: 660 NSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNPSVYVLLSNICAAAGQWEEAANLRD 719
SN S+ S CA G + + L EK + + + + G +EA + +
Sbjct: 692 ASN---SMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAE 748
Query: 720 MMREFG 725
MRE G
Sbjct: 749 EMRESG 754
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 175/408 (42%), Gaps = 52/408 (12%)
Query: 99 NSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSASTRLGHVGDALKLFDQMPN 154
NSL + A + + +R AE+ P ++ M+++ RLG + DA+ L++ M
Sbjct: 554 NSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK 613
Query: 155 ---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS-VELLD 210
+ N V+ ++I A++G + A FR M++ GV+ + TS++ S V L+
Sbjct: 614 TGVKPNEVVYGSLINGF-AESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 211 FGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV-EAGLRDHVTYNAMID 269
R V+ + S + NS++++ + G V +A +F + E G D +++ M+
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMY 732
Query: 270 GLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM---------SSCSSL----------- 309
+ ++A + +M+++ +F VM S C L
Sbjct: 733 LYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLL 792
Query: 310 --------------RVGCQAQAQS-IKTGFDAYT--AVNNATMTMYSCFG----KVNEAQ 348
+ G ++A S ++T ++ A T T++S G + Q
Sbjct: 793 LDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQ 852
Query: 349 NIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ 408
+ R+ ++N +I + + A+ Y++M+ G+EPD T L+G
Sbjct: 853 ELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAG 912
Query: 409 VVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL 456
+VE V + S++ ++E SL A R+ ++ Q +++ K +
Sbjct: 913 MVEGVKRVHSRLTFGELEPSQSLFKA-VRDAYVSANRQDLADVVKKEM 959
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/537 (19%), Positives = 205/537 (38%), Gaps = 91/537 (16%)
Query: 123 YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRS---NVAVWNAIITRCGADNGHDDVAF 179
+P ++ +LSA ++ + L +QM N N + +I+ C +A
Sbjct: 78 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY-SILINCFCRRSQLPLAL 136
Query: 180 DLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMY 238
+ M K+G P+ T +S+L+ C + + + + +G+ T N+LI
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 239 F----------------NCGCVVD-------------------AYQVFGEVEAGLRDH-- 261
F GC D A+ + ++E G +
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV 256
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIK 321
+ YN +IDGL + +DA +F++M+ P T+ S++S +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN------------- 303
Query: 322 TGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNET 377
+G+ ++A + M ER D+ +++ +I F +E
Sbjct: 304 -------------------YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 378 AILTYLKMRRVGIEPDEFTYGSLLGA---SDSL-QVVEMVHSLLSKIGLMKVEVLNSLIA 433
A Y +M + I+P TY SL+ D L + +M ++SK V N+LI
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 434 AYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKP 489
+C+ R+ +++F + + L +++N +I G G E F +++ + P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 490 NAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVF 549
N V Y+ R I N ++ K G ++ +F
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 550 NAM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSA 602
+ VK D +++N +IS + + G +EA F+ M+ G P+ + ++ A
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK-EDGTLPNSGCYNTLIRA 580
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/517 (18%), Positives = 220/517 (42%), Gaps = 37/517 (7%)
Query: 246 DAYQVFGEV--EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM 303
DA +FGE+ + ++ ++ + ++++ + + MQ T+ S++
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY-SIL 122
Query: 304 SSC----SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERM----E 355
+C S L + + +K G++ ++ + Y +++EA + ++M
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 356 ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHS 415
+ + V++N +I F N A+ +M G +PD TYG ++ ++ +
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 416 LLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFL 467
LL+K+ K+E + N++I C+ ++ AL +F + K + ++++++IS
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 468 TNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEIS 527
G S ++ + P+ + ++++ +++ I
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 528 LGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAM 583
++L+ + LD + +F MV + D +++N LI + ++ + +E + F M
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 584 QISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSG 643
G+ + T+ I++ G D IF MV+ G P++ ++ ++D L ++G
Sbjct: 423 S-QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNG 480
Query: 644 YLEEAERLIKGGYFGANSNICWSLFS-ACAAHGNLRLGR------MVARLLLEKDHNNPS 696
LE+A + + + S + ++++ G + G+ + L L+ +
Sbjct: 481 KLEKAMVVFE---YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 697 VY-VLLSNICAAAGQWEEAANLRDMMREFGTTKQPGC 732
Y ++S C G EEA L M+E GT GC
Sbjct: 538 AYNTMISGFCRK-GSKEEADALFKEMKEDGTLPNSGC 573
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/327 (18%), Positives = 142/327 (43%), Gaps = 18/327 (5%)
Query: 343 KVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYG 398
K+++A +F M + ++ ++ ++S + N + I +M+ +GI + +TY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 399 SLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWAL----QIFSN 450
L+ + + ++L K+ + E L+SL+ YC + RI+ A+ Q+F
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 451 LPYKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHG 510
+ +++NT+I G + + + ++ +P+
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 511 KQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISA 566
+ + + + + N ++ K +D +L +F M ++ + +++++LIS
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
+G+ +A M I I PD TF+ ++ A G + + +++D MV
Sbjct: 301 LCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK-RSID 358
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERLIK 653
PS+ +S +++ L+EA+++ +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFE 385
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 213/495 (43%), Gaps = 40/495 (8%)
Query: 189 GVRPDGYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA 247
GV PD Y FT+ + + C ++ + S + +G N++I CG +A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 248 YQVFGE--VEAGLRDH-VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
+ +F E VE G+ +TY+ ++ GL R R DA+ + ++M K F P + +++
Sbjct: 315 F-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 305 S---CSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS 361
S SL + + + G ++ N + Y G+ + A+ + + M +
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS---IG 430
Query: 362 WNI-------MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA----SDSLQVV 410
+N+ +I + + ++A+ +M + P +L+ + +
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 411 EMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGF 466
E+ L+K ++ N+L+ C G+++ A +I + + +S+NT+ISG
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG- 549
Query: 467 LTNGCPLQGLEQ----FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
C + L++ ++ LKP+ Y Q R+G
Sbjct: 550 ---CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAVC 578
++ + ++ K + F+ M V+ +T+ +N LI AY + G+ A+
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 579 CFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDL 638
E M+ GI P+ AT+T ++ S + V++ +F+ M + G P+V H++ ++D
Sbjct: 667 LREDMK-HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDG 724
Query: 639 LGRSGYLEEAERLIK 653
G+ G + + E L++
Sbjct: 725 YGKLGQMVKVECLLR 739
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 140/600 (23%), Positives = 234/600 (39%), Gaps = 129/600 (21%)
Query: 90 GLKAHSHVANSLLSLYAKAEDLASVERAFAEI---EYPDDYSWTTMLSASTRLGHVGDAL 146
G+ N LL+ +A + AF + PD Y +TT ++A + G V +A+
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 147 KLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS- 202
KLF +M NV +N +I G G D AF M + G+ P T++ ++
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGM-CGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 203 LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG-EVEAGLR-D 260
L + + V + + GF V N+LI + G + A ++ V GL
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS-SCSSL---------- 309
TYN +I G + + ++A + ++M F+ + +F SV+ CS L
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 310 ----------------------RVGCQAQA-----QSIKTGFDAYTAVNNATMTMYSCFG 342
+ G ++A Q + GF T +NA + G
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 343 KVNEAQNIFERMEER----DLVSWNIMIS------------MFFQE-------------- 372
K++EA I + + R D VS+N +IS MF E
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 373 -------NLN--ETAILTYLKMRRVGIEPDEFTYGSLL----GASDSLQVVEMVHSLLSK 419
N+N E AI + +R G+ PD +TY ++ A + + E ++SK
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 420 IGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYK----------SLISWNTIIS----- 464
V N LI AYCR+GR++ AL++ ++ +K SLI +IIS
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 465 GFLTNGCPLQGLE----QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
L ++GLE ++AL+ + Y H K VH + +
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALI------DGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEA 576
++ YA+ G++ + + N M ++ D+I++ I Y + G EA
Sbjct: 754 ---------TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 113/580 (19%), Positives = 209/580 (36%), Gaps = 129/580 (22%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N LL +L R+N+ + + F + + PD Y +TAI A A +++
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+ + + V + L E E+ P +++ ++ TR +G
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 144 DALKLFDQMPNR---SNVAVWNAII----------------------------------T 166
DA + +M + NV V+N +I
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 167 RCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLD--------------- 210
+ NG D A L ++M IG + +FTS++ LCS + D
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 211 ---------------FGRHVHSV-----VIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
G+H ++ + GF+ T N+L+ G + +A+++
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 251 FGEV--EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATF--------- 299
E+ + D V+YN +I G + ++AF+ +M K P T+
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 300 -------VSVMSSC------------SSLRVGCQAQAQSIKTG---FDAY--------TA 329
+ C S + GC +A+ + G FD T
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC-CKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDL----VSWNIMISMFFQENLNETAILTYLKM 385
V N + Y G+++ A + E M+ + + ++ +I + E A L + +M
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 386 RRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRI 441
R G+EP+ F Y +L+ L + V LL ++ V +I Y R+G +
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 442 NWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLE 477
A ++ + + K + I++ I G+L G L+ +
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 213/495 (43%), Gaps = 40/495 (8%)
Query: 189 GVRPDGYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDA 247
GV PD Y FT+ + + C ++ + S + +G N++I CG +A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 248 YQVFGE--VEAGLRDH-VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS 304
+ +F E VE G+ +TY+ ++ GL R R DA+ + ++M K F P + +++
Sbjct: 315 F-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 305 S---CSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEERDLVS 361
S SL + + + G ++ N + Y G+ + A+ + + M +
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS---IG 430
Query: 362 WNI-------MISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA----SDSLQVV 410
+N+ +I + + ++A+ +M + P +L+ + +
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 411 EMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGF 466
E+ L+K ++ N+L+ C G+++ A +I + + +S+NT+ISG
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG- 549
Query: 467 LTNGCPLQGLEQ----FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGF 522
C + L++ ++ LKP+ Y Q R+G
Sbjct: 550 ---CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 523 SSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAVC 578
++ + ++ K + F+ M V+ +T+ +N LI AY + G+ A+
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 579 CFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDL 638
E M+ GI P+ AT+T ++ S + V++ +F+ M + G P+V H++ ++D
Sbjct: 667 LREDMK-HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDG 724
Query: 639 LGRSGYLEEAERLIK 653
G+ G + + E L++
Sbjct: 725 YGKLGQMVKVECLLR 739
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 140/600 (23%), Positives = 234/600 (39%), Gaps = 129/600 (21%)
Query: 90 GLKAHSHVANSLLSLYAKAEDLASVERAFAEI---EYPDDYSWTTMLSASTRLGHVGDAL 146
G+ N LL+ +A + AF + PD Y +TT ++A + G V +A+
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 147 KLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS- 202
KLF +M NV +N +I G G D AF M + G+ P T++ ++
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGM-CGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 203 LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG-EVEAGLR-D 260
L + + V + + GF V N+LI + G + A ++ V GL
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 261 HVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMS-SCSSL---------- 309
TYN +I G + + ++A + ++M F+ + +F SV+ CS L
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 310 ----------------------RVGCQAQA-----QSIKTGFDAYTAVNNATMTMYSCFG 342
+ G ++A Q + GF T +NA + G
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 343 KVNEAQNIFERMEER----DLVSWNIMIS------------MFFQE-------------- 372
K++EA I + + R D VS+N +IS MF E
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 373 -------NLN--ETAILTYLKMRRVGIEPDEFTYGSLL----GASDSLQVVEMVHSLLSK 419
N+N E AI + +R G+ PD +TY ++ A + + E ++SK
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 420 IGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYK----------SLISWNTIIS----- 464
V N LI AYCR+GR++ AL++ ++ +K SLI +IIS
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 465 GFLTNGCPLQGLE----QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
L ++GLE ++AL+ + Y H K VH + +
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALI------DGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEA 576
++ YA+ G++ + + N M ++ D+I++ I Y + G EA
Sbjct: 754 ---------TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 113/580 (19%), Positives = 209/580 (36%), Gaps = 129/580 (22%)
Query: 24 NHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLH 83
N LL +L R+N+ + + F + + PD Y +TAI A A +++
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 84 AHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRLGHVG 143
+ + + V + L E E+ P +++ ++ TR +G
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 144 DALKLFDQMPNR---SNVAVWNAII----------------------------------T 166
DA + +M + NV V+N +I
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 167 RCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLD--------------- 210
+ NG D A L ++M IG + +FTS++ LCS + D
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 211 ---------------FGRHVHSV-----VIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
G+H ++ + GF+ T N+L+ G + +A+++
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 251 FGEV--EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATF--------- 299
E+ + D V+YN +I G + ++AF+ +M K P T+
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 300 -------VSVMSSC------------SSLRVGCQAQAQSIKTG---FDAY--------TA 329
+ C S + GC +A+ + G FD T
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC-CKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 330 VNNATMTMYSCFGKVNEAQNIFERMEERDL----VSWNIMISMFFQENLNETAILTYLKM 385
V N + Y G+++ A + E M+ + + ++ +I + E A L + +M
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 386 RRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRI 441
R G+EP+ F Y +L+ L + V LL ++ V +I Y R+G +
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 442 NWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLE 477
A ++ + + K + I++ I G+L G L+ +
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 121/546 (22%), Positives = 224/546 (41%), Gaps = 70/546 (12%)
Query: 160 VWNAIITRCGADNG--HDDVAFDLFRDMQKIGVRPDGYTFTSML-SLCSVELLDFGRHVH 216
+WN++I + NG HD V+ ++ M GV PD + ++ S C V L F +
Sbjct: 95 LWNSLIHQFNV-NGLVHDQVSL-IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL- 151
Query: 217 SVVIRSGFLARTSVV-NSLITMYFNCGCVVDAYQVFGE-VEAG-LRDHVTYNAMIDGLVR 273
+R+ ++ +V N++I+ G +AYQ E V+ G L D V+YN +IDG +
Sbjct: 152 ---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCK 208
Query: 274 VDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNA 333
V A + ++ + T ++SS +L +A + +GFD ++
Sbjct: 209 VGNFVRAKALVDEISELNL----ITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSS 264
Query: 334 TMTMYSCFGKVNEAQNIFERMEERDL----VSWNIMISMFFQENLNETAILTYLKMRRVG 389
+ GKV E + MEE + V++ ++ F+ N+ A+ Y +M G
Sbjct: 265 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 324
Query: 390 IEPDEFTY----GSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWAL 445
I D Y L A D + + LL + V +L+ C+ G ++ A
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384
Query: 446 QIFSNLPYKSLI----SWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXX 501
I + + KS+I +++++I+G++ G + + + + + PN +
Sbjct: 385 FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 444
Query: 502 XXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR------ 555
++ + G + +ALV + G + G+ MV +
Sbjct: 445 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504
Query: 556 ---------------------------------DTISWNALISAYAQHGQGKEAVCCFEA 582
D +S+N LIS + G+ A ++
Sbjct: 505 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKG 563
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRS 642
M+ GIEPD ATF I++++ G + +++D M + G PS+ + +V +L +
Sbjct: 564 MR-EKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC-GIKPSLMSCNIVVGMLCEN 621
Query: 643 GYLEEA 648
G +EEA
Sbjct: 622 GKMEEA 627
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 133/658 (20%), Positives = 266/658 (40%), Gaps = 60/658 (9%)
Query: 51 TLRPDHYTLSTAITA--SANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKA 108
++ P+H T +T + + AN A A L++ + G+ V L+ KA
Sbjct: 289 SVYPNHVTYTTLVDSLFKANIYRHALA------LYSQMVVRGIPVDLVVYTVLMDGLFKA 342
Query: 109 EDLASVERAFAEI----EYPDDYSWTTMLSASTRLGHVGDALKLFDQMPNRS---NVAVW 161
DL E+ F + + P+ ++T ++ + G + A + QM +S NV +
Sbjct: 343 GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 162 NAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIR 221
+++I G + A L R M+ V P+G+T+ +++ L G+ ++ +
Sbjct: 403 SSMINGY-VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID----GLFKAGKEEMAIELS 457
Query: 222 S-----GFLARTSVVNSLITMYFNCGCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRV 274
G ++++L+ G + + + + V G+ D + Y ++ID +
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517
Query: 275 DRNEDAFVMFRDMQKACFSPMEATFVSVMSS--CSSLRVGCQAQAQSIK-TGFDAYTAVN 331
E A +MQ+ P + +V+ S +VG + ++ G + A
Sbjct: 518 GDEEAALAWAEEMQERGM-PWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATF 576
Query: 332 NATMTMYSCFGKVNEAQNIFERME----ERDLVSWNIMISMFFQENLNETAILTYLKMRR 387
N M G ++++M+ + L+S NI++ M + E AI +M
Sbjct: 577 NIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Query: 388 VGIEPDEFTYGSLLGASDSLQVVEMV---HSLLSKIGL-MKVEVLNSLIAAYCRNGRINW 443
+ I P+ TY L S + + + H L G+ + +V N+LIA C+ G
Sbjct: 637 MEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKK 696
Query: 444 ALQIFSNLPYKSLI----SWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXX 499
A + ++ + I ++N+++ G+ + L +S ++ + PN
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756
Query: 500 XXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR---- 555
+ + G + NAL++ AK G++ GS+ ++ M+
Sbjct: 757 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816
Query: 556 DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSA----CSHVGL--- 608
T ++N LIS +A G+ +A + M G+ P+ +T+ ++S C+H +
Sbjct: 817 KTSTYNVLISEFANVGKMLQARELLKEMG-KRGVSPNTSTYCTMISGLCKLCTHPDVEWN 875
Query: 609 -----VDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGYFGANS 661
+ + + MV G++P I + G +AER +K Y N+
Sbjct: 876 KKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKECYKKKNA 933
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 18/272 (6%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAI-TASANTRPAATATTF 78
++ N ++ L + + E++ + Q+ + P+ T + T+S + R A T
Sbjct: 608 LMSCNIVVGMLCENGKMEEAIHILNQMMLME-IHPNLTTYRIFLDTSSKHKRADAIFKT- 665
Query: 79 GNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLS 134
H + G+K V N+L++ K ++E PD ++ +++
Sbjct: 666 ----HETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMH 721
Query: 135 ASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVR 191
HV AL + M NVA +N II R +D G +M+ G+R
Sbjct: 722 GYFVGSHVRKALSTYSVMMEAGISPNVATYNTII-RGLSDAGLIKEVDKWLSEMKSRGMR 780
Query: 192 PDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQV 250
PD +T+ +++S + + ++ +I G + +TS N LI+ + N G ++ A ++
Sbjct: 781 PDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAREL 840
Query: 251 FGEV-EAGLRDHV-TYNAMIDGLVRVDRNEDA 280
E+ + G+ + TY MI GL ++ + D
Sbjct: 841 LKEMGKRGVSPNTSTYCTMISGLCKLCTHPDV 872
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 530 NALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
+ ++ MY+ C S D +L VFN M KR++ +W +I A++G+G+ A+ F I G
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRF-IEEGN 205
Query: 590 EPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
+PD F V AC +G +++G F+ M YG V S++ + ++++L G+L+EA
Sbjct: 206 KPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEAL 265
Query: 650 RLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLEKD 691
++ + + +L + C G L LG A L+ + D
Sbjct: 266 DFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLD 307
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/511 (20%), Positives = 200/511 (39%), Gaps = 82/511 (16%)
Query: 127 YSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGH-------DDVAF 179
Y++ +++ R + AL L +M + +I+T NG+ D VA
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKM---MKLGYEPSIVTLSSLLNGYCHGKRISDAVA- 176
Query: 180 DLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYF 239
L M ++G RPD TFT+++ G +H+ + L V
Sbjct: 177 -LVDQMVEMGYRPDTITFTTLIH---------GLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 240 NCGCVVDAYQVFGEVEAGLR------------DHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
G VV+ G+ + L D V +N +ID L + +DA +F++M
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 288 QKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
+ P T+ S++S S +G+ ++A
Sbjct: 287 ETKGIRPNVVTYSSLISCLCS--------------------------------YGRWSDA 314
Query: 348 QNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA 403
+ M E+ +LV++N +I F +E A Y M + I+PD FTY SL+
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 404 ---SDSL-QVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL--- 456
D L + +M ++SK V N+LI +C++ R+ ++F + ++ L
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 457 -ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHG 515
+++ T+I G +G + F +++ + P+ +V
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 516 YILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHG 571
Y+ + +I + ++ K G +D +F ++ VK + +++N +IS
Sbjct: 495 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Query: 572 QGKEAVCCFEAMQISPGIEPDHATFTIVLSA 602
+EA + M+ G P+ T+ ++ A
Sbjct: 555 LLQEAYALLKKMK-EDGPLPNSGTYNTLIRA 584
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/426 (19%), Positives = 189/426 (44%), Gaps = 27/426 (6%)
Query: 246 DAYQVFGEV--EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM 303
DA +FG + L V +N ++ + ++ + + + MQ+ T+ +++
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTY-NIL 126
Query: 304 SSC----SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGK-VNEAQNIFERMEER- 357
+C S + + + +K G++ ++ + Y C GK +++A + ++M E
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGY-CHGKRISDAVALVDQMVEMG 185
Query: 358 ---DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVH 414
D +++ +I F N A+ +M + G +P+ TYG ++ ++
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 415 SLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGF 466
+LL+K+ K+E + N++I + C+ ++ AL +F + K + ++++++IS
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 467 LTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEI 526
+ G + S ++ + PN ++++ +++ +I
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 527 SLGNALVTMYAKCGSLDGSLGVFNAMVKRD----TISWNALISAYAQHGQGKEAVCCFEA 582
N+LV + LD + +F MV +D +++N LI + + + ++ F
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 583 MQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRS 642
M G+ D T+T ++ H G D+ ++F MV+ G P + +S ++D L +
Sbjct: 426 MS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNN 483
Query: 643 GYLEEA 648
G LE+A
Sbjct: 484 GKLEKA 489
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 158/379 (41%), Gaps = 26/379 (6%)
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS-CSSLRV--GCQAQAQS 319
TYN +I+ R + A + M K + P T S+++ C R+ Q
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLN 375
++ G+ T + K +EA + +RM +R +LV++ ++++ +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMK-------VEVL 428
+ A+ KM IE D + +++ DSL V L+ M+ V
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTII---DSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 429 NSLIAAYCRNGRINWALQIFSNLPYK----SLISWNTIISGFLTNGCPLQGLEQFSALLN 484
+SLI+ C GR + A Q+ S++ K +L+++N +I F+ G ++ + + ++
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 485 TPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDG 544
+ P+ + KQ+ +++ ++ N L+ + K ++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 545 SLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVL 600
+F M R DT+++ LI G A F+ M +S G+ PD T++I+L
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM-VSDGVPPDIMTYSILL 477
Query: 601 SACSHVGLVDDGTRIFDMM 619
+ G ++ +FD M
Sbjct: 478 DGLCNNGKLEKALEVFDYM 496
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 190/496 (38%), Gaps = 99/496 (19%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFG 79
I+ L+ LL + ++++ L Q+ RPD T +T I A+ A
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSASTRL 139
+++ + L + V N L L + + A D + T++ + +
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273
Query: 140 GHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTS 199
HV DAL LF +M + G+RP+ T++S
Sbjct: 274 RHVDDALNLFKEMETK---------------------------------GIRPNVVTYSS 300
Query: 200 MLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV--EA 256
++S LCS + S +I N+LI + G V+A +++ ++ +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSLRVGCQA 315
D TYN++++G DR + A MF M K CF + + C S R
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR----- 415
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQ 371
V + +F M R D V++ +I F
Sbjct: 416 ----------------------------VEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 372 ENLNETAILTYLKMRRVGIEPDEFTYGSLLGA-------SDSLQVVEMVHSLLSKIGLMK 424
+ + A + +M G+ PD TY LL +L+V + + S+I L
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK--SEIKL-D 504
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYK----SLISWNTIISGFLTNGCPLQGLEQFS 480
+ + ++I C+ G+++ +F +L K +++++NT+ISG C + L++
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL----CSKRLLQEAY 560
Query: 481 ALL-----NTPLKPNA 491
ALL + PL PN+
Sbjct: 561 ALLKKMKEDGPL-PNS 575
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/263 (18%), Positives = 112/263 (42%), Gaps = 19/263 (7%)
Query: 397 YGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSN---LPY 453
+ ++ + +Q +E+VH L + N LI +CR +I+ AL + L Y
Sbjct: 101 FDVVISLGEKMQRLEIVHGLYT---------YNILINCFCRRSQISLALALLGKMMKLGY 151
Query: 454 K-SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQ 512
+ S+++ +++++G+ + ++ +P+
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 513 VHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYA 568
+ +++ G + +V K G D +L + N M ++ D + +N +I +
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 569 QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPS 628
++ +A+ F+ M+ + GI P+ T++ ++S G D +++ M+ P+
Sbjct: 272 KYRHVDDALNLFKEME-TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE-KKINPN 329
Query: 629 VDHFSCIVDLLGRSGYLEEAERL 651
+ F+ ++D + G EAE+L
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKL 352
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 197/446 (44%), Gaps = 40/446 (8%)
Query: 36 HTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHS 95
+TE L++ ++ L+ + +T + A +R + A ++ R G K
Sbjct: 183 NTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAF----DVYCEIRRGGHKLDI 238
Query: 96 HVANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSASTRLGHVGDALKLFDQ 151
N LL AK E V F +++ D+Y++T M+ R+G +A+ LF++
Sbjct: 239 FAYNMLLDALAKDEKACQV---FEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNE 295
Query: 152 MPNRS---NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVEL 208
M NV +N ++ + A D A +F M + G RP+ YT++ +L+L E
Sbjct: 296 MITEGLTLNVVGYNTLM-QVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE- 353
Query: 209 LDFGRHVH--SVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV----EAGLRDHV 262
G+ V VV S + + L+ G V +A+++F ++ G RD
Sbjct: 354 ---GQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD-- 408
Query: 263 TYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQ---AQS 319
+Y +M++ L + +A M + + + +V S+ L+ +
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 320 IKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME----ERDLVSWNIMISMFFQENLN 375
K G N + + G+V+EA NIFE +E + D++S+N +I+ +
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 376 ETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMK-----VEVLNS 430
+ A + + +M+ G+ PD TY +L+ + VEM +SL ++ L+K + N
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM-LVKGCQPNIVTYNI 587
Query: 431 LIAAYCRNGRINWALQIFSNLPYKSL 456
L+ +NGR A+ ++S + + L
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGL 613
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 165/394 (41%), Gaps = 65/394 (16%)
Query: 26 LLATLTRSNQHTESLKLFTQ-IHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHA 84
++ T+ R + E++ LF + I TL Y + A A Q+ +
Sbjct: 276 MIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI------QVFS 329
Query: 85 HAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEI--EYPDDYSWTTMLSASTRLGHV 142
+ TG + + + + LL+L L ++ EI Y ++ ++ ++LGHV
Sbjct: 330 RMVETGCRPNEYTYSLLLNLLVAEGQLVRLD-GVVEISKRYMTQGIYSYLVRTLSKLGHV 388
Query: 143 GDALKLFDQM---PNRSNVAVWNAII-TRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFT 198
+A +LF M P + + +++ + CGA G A ++ + + GV D +
Sbjct: 389 SEAHRLFCDMWSFPVKGERDSYMSMLESLCGA--GKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 199 SMLSLCSVELLDFGRHVHSV---VIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
++ S ++ L H+H + + + G N LI + G V +A +F E+E
Sbjct: 447 TVFS--ALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 256 AG--LRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGC 313
D ++YN++I+ L + ++A V F++MQ+ +P T+ ++M
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME--------- 555
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGK---VNEAQNIFERME----ERDLVSWNIMI 366
CFGK V A ++FE M + ++V++NI++
Sbjct: 556 --------------------------CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Query: 367 SMFFQENLNETAILTYLKMRRVGIEPDEFTYGSL 400
+ A+ Y KM++ G+ PD TY L
Sbjct: 590 DCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 198/498 (39%), Gaps = 70/498 (14%)
Query: 127 YSWTTMLSASTRLGHVGDALKLFDQMPNRSNVAVWNAIITRCGADNGH-------DDVAF 179
Y++ +++ R + AL L +M + +I+T NG+ D VA
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKM---MKLGYEPSIVTLSSLLNGYCHGKRISDAVA- 176
Query: 180 DLFRDMQKIGVRPDGYTFTSML--------SLCSVELLD--FGRHVHSVVIRSGFLARTS 229
L M ++G RPD TFT+++ + +V L+D R ++ G +
Sbjct: 177 -LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 230 VVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK 289
I + FN ++A ++ V V Y+ +ID L + +DA +F +M+
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANV-------VIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 290 ACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQN 349
P T+ S++S + Y ++A+ + +
Sbjct: 289 KGVRPNVITYSSLISCLCN------------------YERWSDASRLL----------SD 320
Query: 350 IFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDS 406
+ ER ++V++N +I F +E A Y +M + I+PD FTY SL+ D
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 407 L-QVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNT 461
L + M ++SK V N+LI +C+ RI+ +++F + + L +++ T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 462 IISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHG 521
+I GF F +++ + PN V Y+ R
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 522 FSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAV 577
I N ++ K G ++ +F ++ VK D I +N +IS + + G +EA
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 578 CCFEAMQISPGIEPDHAT 595
F M+ G PD T
Sbjct: 561 ALFRKMR-EDGPLPDSGT 577
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/497 (19%), Positives = 208/497 (41%), Gaps = 53/497 (10%)
Query: 176 DVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSL 234
D+ L MQ++G+ + YT+ +++ C + + +++ G+ ++SL
Sbjct: 102 DLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 235 ITMYFNCGCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACF 292
+ Y + + DA + + VE G R D +T+ +I GL ++ +A + M
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM----- 216
Query: 293 SPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFE 352
++ GCQ + Y V N G ++ A N+
Sbjct: 217 ----------------VQRGCQPNLVT-------YGVVVNGLCKR----GDIDLAFNLLN 249
Query: 353 RME----ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ 408
+ME E ++V ++ +I + + A+ + +M G+ P+ TY SL+ + +
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Query: 409 VVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWN 460
LLS + K+ N+LI A+ + G++ A +++ + +S+ +++
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 461 TIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
++I+GF + + F +++ PN G ++ + +
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEA 576
G L+ + + D + VF MV + +++N L+ ++G+ ++A
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 577 VCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIV 636
+ FE +Q S +EP T+ I++ G V+DG +F +++ G P V ++ ++
Sbjct: 490 MVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDGWDLF-CSLSLKGVKPDVIIYNTMI 547
Query: 637 DLLGRSGYLEEAERLIK 653
R G EEA+ L +
Sbjct: 548 SGFCRKGLKEEADALFR 564
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 123/310 (39%), Gaps = 53/310 (17%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
++ +L + ++L LFT++ + +RP+ T S+ I+ N + A+ +L +
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDAS----RLLSD 320
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE----------------------- 122
I + + N+L+ + K L E+ + E+
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 123 ----------------YPDDYSWTTMLSASTRLGHVGDALKLFDQMPNR---SNVAVWNA 163
+P+ ++ T+++ + + + ++LF +M R N +
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 164 IITRCGADNGHD-DVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIR 221
+I G D D A +F+ M GV P+ T+ ++L LC L+ V + R
Sbjct: 441 LIH--GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 222 SGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE-AGLR-DHVTYNAMIDGLVRVDRNED 279
S N +I G V D + +F + G++ D + YN MI G R E+
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Query: 280 AFVMFRDMQK 289
A +FR M++
Sbjct: 559 ADALFRKMRE 568
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 143/351 (40%), Gaps = 20/351 (5%)
Query: 392 PDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQI 447
P F + LL A ++ ++V SL K+ + + N LI +CR +I+ AL +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 448 FSN---LPYK-SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXX 503
L Y+ S+++ +++++G+ + ++ +P+
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 504 XXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTIS 559
+ +++ G + +V K G +D + + N M ++ + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 560 WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
++ +I + ++ +A+ F M+ + G+ P+ T++ ++S + D +R+ M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEME-NKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 620 VNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL----IKGGYFGANSNICWSLFSACAAHG 675
+ P+V F+ ++D + G L EAE+L IK + SL + H
Sbjct: 322 IE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHD 379
Query: 676 NLRLGRMVARLLLEKD-HNNPSVYVLLSNICAAAGQWEEAANLRDMMREFG 725
L + + L++ KD N Y L N A + +E L M + G
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 202/490 (41%), Gaps = 64/490 (13%)
Query: 17 SEQILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATAT 76
S + N L+ R +Q + +L L ++ P TLS+ + + + + A
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAV 100
Query: 77 TFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEYPDDYSWTTMLSAS 136
+Q+ R + + + L +E +A V+R P+ ++ +++
Sbjct: 101 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
Query: 137 TRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
+ G + A L ++M ++V ++N II H D A +LF++M+ G+RP+
Sbjct: 161 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL-CKYRHVDDALNLFKEMETKGIRPN 219
Query: 194 GYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
T++S++S LCS + S +I N+LI + G V+A ++
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 253 EV--EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM-QKACFSPMEATFVSVMSSCSSL 309
++ + D TYN++I+G DR + A MF M K CF ++ + C S
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 310 RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIM 365
R V + +F M R D V++ +
Sbjct: 340 R---------------------------------VEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 366 ISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA-------SDSLQVVEMVHSLLS 418
I F + + A + +M G+ PD TY LL +L+V + + S
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK--S 424
Query: 419 KIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYK----SLISWNTIISGFLTNGCPLQ 474
+I L + + ++I C+ G+++ +F +L K +++++NT+ISG C +
Sbjct: 425 EIKL-DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL----CSKR 479
Query: 475 GLEQFSALLN 484
L++ ALL
Sbjct: 480 LLQEAYALLK 489
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 182/406 (44%), Gaps = 25/406 (6%)
Query: 264 YNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC----SSLRVGCQAQAQS 319
+N ++ + ++ + + + MQ+ S T+ +++ +C S + + +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTY-NILINCFCRRSQISLALALLGKM 71
Query: 320 IKTGFDAYTAVNNATMTMYSCFGK-VNEAQNIFERMEER----DLVSWNIMISMFFQENL 374
+K G++ ++ + Y C GK +++A + ++M E D +++ +I F N
Sbjct: 72 MKLGYEPSIVTLSSLLNGY-CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNS 430
A+ +M + G +P+ TYG ++ +++ +LL+K+ K+E + N+
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 431 LIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
+I + C+ ++ AL +F + K + ++++++IS + G + S ++
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 487 LKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSL 546
+ PN +++H +++ +I N+L+ + LD +
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 547 GVFNAMVKRDTI----SWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSA 602
+F MV +D ++N LI + + + ++ F M G+ D T+T ++
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS-HRGLVGDTVTYTTLIQG 369
Query: 603 CSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEA 648
H G D+ ++F MV+ G P + +S ++D L +G LE+A
Sbjct: 370 LFHDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEKA 414
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/486 (19%), Positives = 196/486 (40%), Gaps = 62/486 (12%)
Query: 176 DVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSL 234
D+ L MQ++G+ + YT+ +++ C + + +++ G+ ++SL
Sbjct: 27 DLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 86
Query: 235 ITMYFNCGCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMF-RDMQKAC 291
+ Y + + DA + + VE G R D +T+ +I GL ++ +A + R +Q+ C
Sbjct: 87 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 146
Query: 292 FSPMEATFVSVMSSCS----SLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEA 347
+ V V C L + ++ K +A + N + + V++A
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK--IEADVVIFNTIIDSLCKYRHVDDA 204
Query: 348 QNIFERMEER---------------------------------------DLVSWNIMISM 368
N+F+ ME + +LV++N +I
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA---SDSL-QVVEMVHSLLSKIGLMK 424
F +E A + M + I+PD FTY SL+ D L + +M ++SK
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQFS 480
++ N+LI +C++ R+ ++F + ++ L +++ T+I G +G + F
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 481 ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
+++ + P+ +V Y+ + +I + ++ K G
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 541 SLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATF 596
+D +F ++ VK + +++N +IS +EA + M+ G PD T+
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK-EDGPLPDSGTY 503
Query: 597 TIVLSA 602
++ A
Sbjct: 504 NTLIRA 509
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 116/272 (42%), Gaps = 14/272 (5%)
Query: 392 PDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQI 447
P F + LL A ++ ++V SL K+ + + N LI +CR +I+ AL +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 448 FSN---LPYK-SLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXX 503
L Y+ S+++ +++++G+ + ++ +P+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 504 XXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTIS 559
+ +++ G + +V K G +D + + N M ++ D +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 560 WNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
+N +I + ++ +A+ F+ M+ + GI P+ T++ ++S G D +++ M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEME-TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 620 VNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
+ P++ F+ ++D + G EAE+L
Sbjct: 247 IE-KKINPNLVTFNALIDAFVKEGKFVEAEKL 277
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Query: 509 HGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYA 568
K VHG I ++S + L+ MY+ CG + + VF M +++ +W +I +A
Sbjct: 272 EAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFA 331
Query: 569 QHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPS 628
++G G++A+ F + I PD F + AC +G VD+G F+ M YG PS
Sbjct: 332 KNGFGEDAIDMFSRFKEEGNI-PDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPS 390
Query: 629 VDHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLL 687
++ + +V++ G+L+EA ++ N ++ +L + HGNL LG A ++
Sbjct: 391 IEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVV 449
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 331 NNATMTMYSCFGKVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGI 390
N+ + MYS G NEA ++FE+M E++L +W I+I F + E AI + + + G
Sbjct: 292 NHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGN 351
Query: 391 EPDEFTYGSLLGASDSLQVVE--MVH--SLLSKIGLM-KVEVLNSLIAAYCRNGRINWAL 445
PD + + A L V+ ++H S+ G+ +E SL+ Y G ++ AL
Sbjct: 352 IPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEAL 411
Query: 446 QIFSNLPYKSLIS-WNTIIS 464
+ +P + + W T+++
Sbjct: 412 EFVERMPMEPNVDVWETLMN 431
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/524 (20%), Positives = 214/524 (40%), Gaps = 48/524 (9%)
Query: 137 TRLGHVGDALKLFDQMPNRS---NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPD 193
R+ A+ L+ +M R N+ +N I+ +C D + F + K+G +PD
Sbjct: 117 VRMNRPDVAISLYRKMEIRRIPLNIYSFN-ILIKCFCDCHKLSFSLSTFGKLTKLGFQPD 175
Query: 194 GYTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSL-------ITMYFNC---- 241
TF ++L LC + + + ++ +GFL ++ + + + + FN
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLING 235
Query: 242 ----GCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPM 295
G V++A + + V GL D VTY +++G+ ++ + A + M++ P
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 296 EATFVSVMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFE 352
+ +++ AQ ++ ++ G N + + FG+ ++AQ +
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 353 RMEER----DLVSWNIMISMFFQE-NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL 407
M ER D++++N +IS +E L E L + R I PD TY S++
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMIYGFCKH 414
Query: 408 QVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLI----SWNTII 463
+ + + V N++I YCR R++ +Q+ + + L+ ++NT+I
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 464 SGFLTNGCPLQGL----EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILR 519
GF C + L + F +++ + P+ ++ I
Sbjct: 475 HGF----CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 520 HGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKE 575
+ N ++ K +D + +F ++ V+ D ++N +IS + +
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 576 AVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
A F M+ G EPD++T+ ++ C G +D + M
Sbjct: 591 ANVLFHKMK-DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 161/361 (44%), Gaps = 42/361 (11%)
Query: 327 YTAVN-NATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILT 381
YTAV+ N + ++ + + A +++ +ME R ++ S+NI+I F + ++ T
Sbjct: 104 YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLST 163
Query: 382 YLKMRRVGIEPDEFTYGSLLGA-------------------SDSLQVVEMVHSLLSKIGL 422
+ K+ ++G +PD T+ +LL + L+ V + ++ +IGL
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMV-EIGL 222
Query: 423 MKVEV-LNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLE 477
V + N+LI C GR+ A + + + K L +++ TI++G G L
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282
Query: 478 QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYA 537
S + T +KP+ + + +L G + + N ++ +
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 538 KCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDH 593
G + + M++R D +++NALISA + G+ EA + M + I PD
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM-LHRCIFPDT 401
Query: 594 ATF-TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI 652
T+ +++ C H DD +FD+M + P V F+ I+D+ R+ ++E +L+
Sbjct: 402 VTYNSMIYGFCKH-NRFDDAKHMFDLMAS-----PDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 653 K 653
+
Sbjct: 456 R 456
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 168/397 (42%), Gaps = 58/397 (14%)
Query: 39 SLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVA 98
+L L +++ +H ++PD S I + A +++ I + ++ +
Sbjct: 280 ALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 99 NSLLSLYAKAEDLASVERAFAEIEY-PDDYSWTTMLSASTRLGHVGDALKLFDQMPNR-- 155
+ S + + D + R E E PD ++ ++SAS + G + +A KL D+M +R
Sbjct: 339 DGFCS-FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
Query: 156 -SNVAVWNAIITRCGADNGHDDVA--FDLFRDMQKIGVRPDGYTFTSMLSL-CSVELLDF 211
+ +N++I N DD FDL PD TF +++ + C + +D
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-------ASPDVVTFNTIIDVYCRAKRVDE 450
Query: 212 GRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE-VEAGL-RDHVTYNAMID 269
G + + R G +A T+ N+LI + + A +F E + G+ D +T N ++
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 270 GLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTA 329
G ++ E+A +F +Q MS D T
Sbjct: 511 GFCENEKLEEALELFEVIQ--------------MSK------------------IDLDTV 538
Query: 330 VNNATMTMYSCFGKVNEAQNIFERME----ERDLVSWNIMISMFFQENLNETAILTYLKM 385
N + KV+EA ++F + E D+ ++N+MIS F ++ A + + KM
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 386 RRVGIEPDEFTYGSL----LGASDSLQVVEMVHSLLS 418
+ G EPD TY +L L A + + +E++ + S
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 114/514 (22%), Positives = 212/514 (41%), Gaps = 79/514 (15%)
Query: 173 GHDDVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVV 231
G D AFDLF+ M++ G+ PD +++++ +L G + S + G V
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 232 NSLITMYFNCGCVVDAYQVFGEV--EAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQK 289
+S I +Y G + A V+ + + + VTY +I GL + R +AF M+ + K
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 290 ACFSPMEATFVSVMS---SCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNE 346
P T+ S++ C +LR G IK G+ + + S G +
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 347 AQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
A +M + ++V +N +I + + N + A+ + M GI+PD T+ +++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 403 AS-------------DSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFS 449
S LQ+ +++ +KI + V N +I + RI A + F+
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQR--NKIS-ADIAVCNVVIHLLFKCHRIEDASKFFN 596
Query: 450 NLP----YKSLISWNTIISGFLTNGCPLQGLEQ----FSALLNTPLKPNAYXXXXXXXXX 501
NL ++++NT+I G+ C L+ L++ F L TP PN
Sbjct: 597 NLIEGKMEPDIVTYNTMICGY----CSLRRLDEAERIFELLKVTPFGPNTVTL------- 645
Query: 502 XXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMV----KRDT 557
L+ + K +DG++ +F+ M K +
Sbjct: 646 ----------------------------TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 558 ISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFD 617
+++ L+ +++ + + FE MQ GI P +++I++ G VD+ T IF
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQ-EKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 736
Query: 618 MMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERL 651
++ +P V ++ ++ + G L EA L
Sbjct: 737 QAIDA-KLLPDVVAYAILIRGYCKVGRLVEAALL 769
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 128/625 (20%), Positives = 242/625 (38%), Gaps = 153/625 (24%)
Query: 132 MLSASTRLGHVGDALKLFDQ-------MPNRSNVAVWNAIITRCGADNGHDDVAFDLFRD 184
++ R G V AL++F +P S + N++I G+D D+ D F
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI---GSD--RVDLIADHFDK 206
Query: 185 MQKIGVRPDGYT---FTSMLSLCSVEL---LDFGRHVHSVVIRSGFLA-----------R 227
+ + G+ P G + F C E+ LDF R V R G ++ +
Sbjct: 207 LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ 266
Query: 228 TSVVNSLITMYFNCGCVVDAYQVFGEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDM 287
V + L+++ +CG + VT+ +I+G + + AF +F+ M
Sbjct: 267 IEVASRLLSLVLDCGPAPNV--------------VTFCTLINGFCKRGEMDRAFDLFKVM 312
Query: 288 QKACFSP---MEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKV 344
++ P +T + L +G + +Q++ G V ++T+ +Y G +
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 345 NEAQNIFERME----ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSL 400
A +++RM ++V++ I+I Q+ A Y ++ + G+EP TY SL
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Query: 401 ----------------------LGASDSLQVVEMVHSLLSKIGLM--------------- 423
+G + + ++ LSK GLM
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 424 --KVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLISWNTIISGFLTNGCPLQGLEQFSA 481
V V NSLI +CR R + AL++F + I G + + F+
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMG----------IYGIKPD------VATFTT 536
Query: 482 LLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGS 541
++ + +A+ G Q+ + R+ S++I++ N ++ + KC
Sbjct: 537 VMRVSIMEDAFCKHMKPTI---------GLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Query: 542 LDGSLGVFNAMVK----RDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFT 597
++ + FN +++ D +++N +I Y + EA FE ++++P P+ T T
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP-FGPNTVTLT 646
Query: 598 IVLSACSHVGLVDDGTRIFDMM----------------------VNI------------Y 623
I++ +D R+F +M V+I
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 624 GFVPSVDHFSCIVDLLGRSGYLEEA 648
G PS+ +S I+D L + G ++EA
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEA 731
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 119/589 (20%), Positives = 222/589 (37%), Gaps = 121/589 (20%)
Query: 26 LLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAH 85
L+ + + + LF ++ + PD ST I A G++L +
Sbjct: 292 LINGFCKRGEMDRAFDLF-KVMEQRGIEPDLIAYSTLIDGYFK----AGMLGMGHKLFSQ 346
Query: 86 AIRTGLKAHSHVANSLLSLYAKAEDLASV----ERAFAEIEYPDDYSWTTMLSASTRLGH 141
A+ G+K V +S + +Y K+ DLA+ +R + P+ ++T ++ + G
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 142 VGDALKLFDQMPNR---SNVAVWNAIIT---RCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
+ +A ++ Q+ R ++ ++++I +CG F L+ DM K+G PD
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS----GFALYEDMIKMGYPPDVV 462
Query: 196 TFTSMLSLCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEVE 255
+ ++ S + G +H++ L ++ +N
Sbjct: 463 IYGVLVDGLSKQ----GLMLHAMRFSVKMLGQSIRLNV---------------------- 496
Query: 256 AGLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQA 315
V +N++IDG R++R ++A +FR M P ATF +VM RV
Sbjct: 497 ------VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM------RVSIME 544
Query: 316 QAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQ 371
DA+ T+ + +F+ M+ D+ N++I + F+
Sbjct: 545 ---------DAFCKHMKPTIGL-----------QLFDLMQRNKISADIAVCNVVIHLLFK 584
Query: 372 ENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGLMKVEVLNSL 431
+ E A + + +EPD TY N++
Sbjct: 585 CHRIEDASKFFNNLIEGKMEPDIVTY-------------------------------NTM 613
Query: 432 IAAYCRNGRINWALQIFSNL---PYKSLISWNTIISGFLTNGCPLQG-LEQFSALLNTPL 487
I YC R++ A +IF L P+ TI+ L + G + FS +
Sbjct: 614 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 673
Query: 488 KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLG 547
KPNA ++ + G S I + ++ K G +D +
Sbjct: 674 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 733
Query: 548 VF----NAMVKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPD 592
+F +A + D +++ LI Y + G+ EA +E M + G++PD
Sbjct: 734 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM-LRNGVKPD 781
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 183/436 (41%), Gaps = 52/436 (11%)
Query: 55 DHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASV 114
D YT + + + A++F ++ + + + N L + E+ S+
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGF-CLGNRMEEAMSM 164
Query: 115 ERAFAEIEY-PDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIIT-RCG 169
E+ PD +TT++ + + GHV AL LFDQM N R +V ++ +++ C
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 170 ADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVE--LLDFGRHVHSVVIRSGFLAR 227
+ D A L R M K ++PD TF +++ E LD +++ +IR
Sbjct: 225 SGRWRD--ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD-AEELYNEMIRMSIAPN 281
Query: 228 TSVVNSLITMYFNCGCVVDAYQVF--GEVEAGLRDHVTYNAMIDGLVRVDRNEDAFVMFR 285
SLI + GCV +A Q+F E + D V Y ++I+G + + +DA +F
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 286 DMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFG 342
+M + + T+ +++ + V + + + G N + G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 343 KVNEAQNIFERMEERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLG 402
KV +A IFE M++R++ G+ P+ +TY LL
Sbjct: 402 KVKKALMIFEDMQKREMD----------------------------GVAPNIWTYNVLLH 433
Query: 403 A---SDSLQVVEMVHSLLSKIGL-MKVEVLNSLIAAYCRNGRINWALQIFSNLPYK---- 454
+ L+ MV + K + + + +I C+ G++ A+ +F +LP K
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 455 SLISWNTIISGFLTNG 470
+++++ T+ISG G
Sbjct: 494 NVVTYTTMISGLFREG 509
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 169/388 (43%), Gaps = 35/388 (9%)
Query: 260 DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS-CS------SLRVG 312
D VT+ ++I+G +R E+A M M + P + +++ S C +L +
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 313 CQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISM 368
Q + I+ YT++ N G+ +A ++ M +R D++++N +I
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNS----GRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLL------GASDSLQVVEMVHSLLSKIGL 422
F +E A Y +M R+ I P+ FTY SL+ G D + +M + + +K
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR--QMFYLMETKGCF 314
Query: 423 MKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLEQ 478
V SLI +C+ +++ A++IF + K L I++ T+I GF G P E
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 479 FSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH---GFSSEISLGNALVTM 535
FS +++ + PN + + + G + I N L+
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 536 YAKCGSLDGSLGVFNAMVKRD----TISWNALISAYAQHGQGKEAVCCFEAMQISPGIEP 591
G L+ +L VF M KR+ I++ +I + G+ K AV F ++ S G++P
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP-SKGVKP 493
Query: 592 DHATFTIVLSACSHVGLVDDGTRIFDMM 619
+ T+T ++S GL + +F M
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 145/340 (42%), Gaps = 50/340 (14%)
Query: 358 DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLL 417
DL + N++++ F Q + A KM ++G EPD T+ SL+ +E S++
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 418 SKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLP----------YKSL------- 456
+++ M ++ + ++I + C+NG +N+AL +F + Y SL
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 457 ----------------------ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXX 494
I++N +I F+ G L E ++ ++ + PN +
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 495 XXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVK 554
+Q+ + G ++ +L+ + KC +D ++ +F M +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 555 R----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVD 610
+ +TI++ LI + Q G+ A F M +S G+ P+ T+ ++L + G V
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM-VSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 611 DGTRIFDMMVN--IYGFVPSVDHFSCIVDLLGRSGYLEEA 648
IF+ M + G P++ ++ ++ L +G LE+A
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 162/388 (41%), Gaps = 20/388 (5%)
Query: 20 ILKLNHLLATLTRSNQHTESLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFG 79
I+ L+ N+ E++ + Q+ ++PD +T I + A +
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQM-VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 80 NQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIEY-PDDYSWTTMLSASTR 138
+Q+ + IR + ++ + N L + + D S+ R + + PD ++ ++ A +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCN-SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 139 LGHVGDALKLFDQMPNRS---NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGY 195
G DA +L+++M S N+ + ++I + G D A +F M+ G PD
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME-GCVDEARQMFYLMETKGCFPDVV 318
Query: 196 TFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE- 253
+TS+++ C + +D + + + G T +LI + G A +VF
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 254 VEAGLRDHV-TYNAMIDGLVRVDRNEDAFVMFRDMQKA---CFSPMEATF-VSVMSSC-- 306
V G+ ++ TYN ++ L + + A ++F DMQK +P T+ V + C
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 307 SSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSW 362
L K D + GKV A N+F + + ++V++
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 363 NIMISMFFQENLNETAILTYLKMRRVGI 390
MIS F+E L A + + KM+ G+
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/523 (20%), Positives = 214/523 (40%), Gaps = 48/523 (9%)
Query: 138 RLGHVGDALKLFDQMPNRS---NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDG 194
R+ A+ L+ +M R N+ +N I+ +C D + F + K+G +PD
Sbjct: 118 RMNRPDVAISLYRKMEIRRIPLNIYSFN-ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDV 176
Query: 195 YTFTSML-SLCSVELLDFGRHVHSVVIRSGFLARTSVVNSL-------ITMYFNC----- 241
TF ++L LC + + + ++ +GFL ++ + + + + FN
Sbjct: 177 VTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGL 236
Query: 242 ---GCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPME 296
G V++A + + V GL D VTY +++G+ ++ + A + M++ P
Sbjct: 237 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 296
Query: 297 ATFVSVMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFER 353
+ +++ AQ ++ ++ G N + + FG+ ++AQ +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 354 MEER----DLVSWNIMISMFFQE-NLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQ 408
M ER D++++N +IS +E L E L + R I PD TY S++
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMIYGFCKHN 415
Query: 409 VVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLPYKSLI----SWNTIIS 464
+ + + V N++I YCR R++ +Q+ + + L+ ++NT+I
Sbjct: 416 RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 475
Query: 465 GFLTNGCPLQGL----EQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRH 520
GF C + L + F +++ + P+ ++ I
Sbjct: 476 GF----CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 521 GFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEA 576
+ N ++ K +D + +F ++ V+ D ++N +IS + +A
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA 591
Query: 577 VCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMM 619
F M+ G EPD++T+ ++ C G +D + M
Sbjct: 592 NVLFHKMK-DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 161/361 (44%), Gaps = 42/361 (11%)
Query: 327 YTAVN-NATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILT 381
YTAV+ N + ++ + + A +++ +ME R ++ S+NI+I F + ++ T
Sbjct: 104 YTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLST 163
Query: 382 YLKMRRVGIEPDEFTYGSLLGA-------------------SDSLQVVEMVHSLLSKIGL 422
+ K+ ++G +PD T+ +LL + L+ V + ++ +IGL
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMV-EIGL 222
Query: 423 MKVEV-LNSLIAAYCRNGRINWALQIFSNLPYKSL----ISWNTIISGFLTNGCPLQGLE 477
V + N+LI C GR+ A + + + K L +++ TI++G G L
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282
Query: 478 QFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYA 537
S + T +KP+ + + +L G + + N ++ +
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 538 KCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDH 593
G + + M++R D +++NALISA + G+ EA + M + I PD
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM-LHRCIFPDT 401
Query: 594 ATF-TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLI 652
T+ +++ C H DD +FD+M + P V F+ I+D+ R+ ++E +L+
Sbjct: 402 VTYNSMIYGFCKH-NRFDDAKHMFDLMAS-----PDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 653 K 653
+
Sbjct: 456 R 456
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 179/426 (42%), Gaps = 63/426 (14%)
Query: 39 SLKLFTQIHSSHTLRPDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVA 98
+L L +++ +H ++PD S I + A +++ I + ++ +
Sbjct: 280 ALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 99 NSLLSLYAKAEDLASVERAFAEIEY-PDDYSWTTMLSASTRLGHVGDALKLFDQMPNR-- 155
+ S + + D + R E E PD ++ ++SAS + G + +A KL D+M +R
Sbjct: 339 DGFCS-FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
Query: 156 -SNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSL-CSVELLDFGR 213
+ +N++I N DD + M + PD TF +++ + C + +D G
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDA-----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 214 HVHSVVIRSGFLARTSVVNSLITMYFNCGCVVD----AYQVFGE-VEAGL-RDHVTYNAM 267
+ + R G +A T+ N+LI + C VD A +F E + G+ D +T N +
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGF----CEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 268 IDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAY 327
+ G ++ E+A +F +Q + D
Sbjct: 509 LYGFCENEKLEEALELFEVIQMS--------------------------------KIDLD 536
Query: 328 TAVNNATMTMYSCFGKVNEAQNIFERME----ERDLVSWNIMISMFFQENLNETAILTYL 383
T N + KV+EA ++F + E D+ ++N+MIS F ++ A + +
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 384 KMRRVGIEPDEFTYGSL----LGASDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNG 439
KM+ G EPD TY +L L A + + +E++ + S G ++A +G
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN-GFSGDAFTIKMVADLITDG 655
Query: 440 RINWAL 445
R++ +
Sbjct: 656 RLDKSF 661
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 1/182 (0%)
Query: 510 GKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRDTISWNALISAYAQ 569
+ VH I+ ++ NA++ MY+ C S+D +L VF M + ++ + ++ +
Sbjct: 138 ARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVN 197
Query: 570 HGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSV 629
+G G+EA+ F + G +P+ F V S C+ G V +G+ F M YG VPS+
Sbjct: 198 NGYGEEAIDLFTRFK-EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSM 256
Query: 630 DHFSCIVDLLGRSGYLEEAERLIKGGYFGANSNICWSLFSACAAHGNLRLGRMVARLLLE 689
+H+ + +L SG+L+EA ++ + ++ +L + HG++ LG A L+ +
Sbjct: 257 EHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEK 316
Query: 690 KD 691
D
Sbjct: 317 LD 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 10/69 (14%)
Query: 142 VGDALKLFDQMPNRSNVAVWNA----IITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
V DALK+F++MP WN+ ++ RC +NG+ + A DLF ++ G +P+G F
Sbjct: 170 VDDALKVFEEMPE------WNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIF 223
Query: 198 TSMLSLCSV 206
+ S C++
Sbjct: 224 NQVFSTCTL 232
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 192/446 (43%), Gaps = 45/446 (10%)
Query: 83 HAHAIRTGLKAHSHVANSLLSLYAKAEDLASVERAFAEIE----YPDDYSWTTMLSASTR 138
HA G+K N L+ +A L ++ PD+ ++TT++
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 139 LGHVGDALKLFDQMPNR----SNVAVWNAIITRCGADNGHDDVAFDLFRDM-QKIGVRPD 193
G + AL++ +QM SNV+V +I G + A + ++M + G PD
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSV--NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 194 GYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFG 252
YTF ++++ LC + + V+++ G+ NS+I+ G V +A +V
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 253 EVEAGLRD----HVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSS--- 305
++ RD VTYN +I L + ++ E+A + R + P TF S++
Sbjct: 355 QMIT--RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 306 CSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERME----ERDLVS 361
+ RV + + G + N + GK++EA N+ ++ME R +++
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIG 421
+N +I F + N A + +M G+ + TY +L+ + VE L+ ++
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM- 531
Query: 422 LMKVE-----VLNSLIAAYCRNGRINWALQIF----SNLPYKSLISWNTIISGFLTNGCP 472
+M+ + NSL+ +CR G I A I SN ++++ T+ISG C
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL----CK 587
Query: 473 LQGLEQFSALLNT------PLKPNAY 492
+E S LL + L P+AY
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAY 613
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 114/572 (19%), Positives = 221/572 (38%), Gaps = 74/572 (12%)
Query: 90 GLKAHSHVANSLLSLYAKAEDLASVERAFAEIEY----PDDYSWTTMLSASTRLGHVGDA 145
GLK +H N +L+L L VE + A++ PD ++ ++ A R + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 146 LKLFDQMPNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCS 205
+ + + MP+ G+ PD TFT+++
Sbjct: 209 ILMLEDMPS---------------------------------YGLVPDEKTFTTVMQGYI 235
Query: 206 VE-LLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGEV---EAGLRDH 261
E LD + ++ G VN ++ + G V DA E+ + D
Sbjct: 236 EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 295
Query: 262 VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSCSSL---RVGCQAQAQ 318
T+N +++GL + + A + M + + P T+ SV+S L + + Q
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 319 SIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVSWNIMISMFFQENL 374
I T N ++ +V EA + + + D+ ++N +I
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 375 NETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIGL----MKVEVLNS 430
+ A+ + +MR G EPDEFTY L+ + S ++ ++L ++ L V N+
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 431 LIAAYCRNGRINWALQIFSNLPY----KSLISWNTIISGFLTNGCPLQGLEQFSALLNTP 486
LI +C+ + A +IF + ++ +++NT+I G C + +E + L++
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL----CKSRRVEDAAQLMDQM 531
Query: 487 L----KPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSL 542
+ KP+ Y + + +G +I L++ K G +
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 543 DGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTI 598
+ + + ++ + ++N +I + + EA+ F M PD ++ I
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 599 VLSA-CSHVGLVDDGTRIFDMMVNIY--GFVP 627
V C+ G + + D +V + GFVP
Sbjct: 652 VFRGLCNGGGPIREAV---DFLVELLEKGFVP 680
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 123/611 (20%), Positives = 238/611 (38%), Gaps = 45/611 (7%)
Query: 145 ALKLFD---QMPNRS-NVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTFTSM 200
AL+LF+ + PN S A++ I+ R G DD+ + DM+ TF +
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMK-KILEDMKSSRCEMGTSTFLIL 124
Query: 201 L-SLCSVELLDFGRHVHSVVIRS-GFLARTSVVNSLITMYF--NCGCVVDAYQVFGEVEA 256
+ S EL D V +I G T N ++ + N +V+ V
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG 184
Query: 257 GLRDHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVMSSC---SSLRVGC 313
D T+N +I L R + A +M DM P E TF +VM L
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 314 QAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER-----DLVSWNIMISM 368
+ + Q ++ G N + + G+V +A N + M + D ++N +++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 369 FFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSL----QVVEMVHSLLSKIGLMK 424
+ + AI M + G +PD +TY S++ L + VE++ ++++
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 425 VEVLNSLIAAYCRNGRINWALQIFSNLPYKSLI----SWNTIISGFLTNGCPLQGLEQFS 480
N+LI+ C+ ++ A ++ L K ++ ++N++I G +E F
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 481 ALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCG 540
+ + +P+ + + + G + + N L+ + K
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 541 SLDGSLGVFNAM----VKRDTISWNALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATF 596
+ +F+ M V R+++++N LI + + ++A + M I G +PD T+
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-IMEGQKPDKYTY 543
Query: 597 TIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAERLIKGGY 656
+L+ G + I M + G P + + ++ L ++G +E A +L++
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTS-NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 657 FG-------ANSNICWSLFSACAAHGNLRLGRMVARLLLEKDHNNP---SVYVLLSNICA 706
A + + LF + L R +LE++ P S ++ +C
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFRE----MLEQNEAPPDAVSYRIVFRGLCN 658
Query: 707 AAGQWEEAANL 717
G EA +
Sbjct: 659 GGGPIREAVDF 669
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 121/561 (21%), Positives = 228/561 (40%), Gaps = 73/561 (13%)
Query: 144 DALKLFDQM------PNRSNVAVWNAIITRCGADNGHDDVAFDLFRDMQKIGVRPDGYTF 197
DA+ LF +M P + + +++ R D+ DL + M+ G+ + YT
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVAR----TKQYDLVLDLCKQMELKGIAHNLYTL 110
Query: 198 TSMLSLC-SVELLDFGRHVHSVVIRSGFLARTSVVNSLITMYFNCGCVVDAYQVFGE-VE 255
+ M++ C L +I+ G+ T ++LI G V +A ++ VE
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 256 AGLRDH-VTYNAMIDGLVRVDRNEDAFVMFRDMQKACFSPMEATFVSVM-----SSCSSL 309
G + +T NA+++GL + DA ++ M + F P E T+ V+ S ++L
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 310 RVGCQAQAQSIKTGFDAYT------------AVNNA--------------------TMTM 337
+ + + K DA +++NA T+
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 338 YSCF-GKVNEAQNIFERMEER----DLVSWNIMISMFFQENLNETAILTYLKMRRVGIEP 392
C+ G+ ++ + M +R D+V+++ +I F +E A + +M + GI P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 393 DEFTYGSLL-GASDSLQVVEMVHSL---LSKIGLMKVEVLNSLIAAYCRNGRINWALQIF 448
D TY SL+ G Q+ + H L +SK + N LI YC+ I+ L++F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 449 SNLPYKSL----ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXX 504
+ + + +++NT+I GF G E F +++ ++P+
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 505 XXXXHGKQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISW 560
++ I + +I + N ++ +D + +F ++ VK D ++
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 561 NALISAYAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMV 620
N +I + G EA F M+ G P+ T+ I++ A H+G D T+ ++
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKME-EDGHSPNGCTYNILIRA--HLG-EGDATKSAKLIE 586
Query: 621 NIY--GFVPSVDHFSCIVDLL 639
I GF +VD+L
Sbjct: 587 EIKRCGFSVDASTVKMVVDML 607
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 150/364 (41%), Gaps = 53/364 (14%)
Query: 306 CSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFERMEER----DLVS 361
C L + A + IK G++ T + + G+V+EA + +RM E L++
Sbjct: 120 CRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 362 WNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGASDSLQVVEMVHSLLSKIG 421
N +++ A+L +M G +P+E TYG +L + LL K+
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 422 LMKVEV----LNSLIAAYCRNGRINWALQIFSNLPYK----SLISWNTIISGFLTNGCPL 473
K+++ + +I C++G ++ A +F+ + K +I + T+I GF G
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 474 QGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGYILRHGFSSEISLGNALV 533
G + ++ + P+ FS AL+
Sbjct: 300 DGAKLLRDMIKRKITPDVV----------------------------AFS-------ALI 324
Query: 534 TMYAKCGSLDGSLGVFNAMVKR----DTISWNALISAYAQHGQGKEAVCCFEAMQISPGI 589
+ K G L + + M++R DT+++ +LI + + Q +A + M +S G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM-VSKGC 383
Query: 590 EPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHFSCIVDLLGRSGYLEEAE 649
P+ TF I+++ L+DDG +F M ++ G V ++ ++ G LE A+
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 650 RLIK 653
L +
Sbjct: 443 ELFQ 446
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 127/327 (38%), Gaps = 53/327 (16%)
Query: 343 KVNEAQNIFERMEERD----LVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYG 398
K ++A ++F+ M L+ ++ + S+ + + + +M GI + +T
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 399 SLLGASDSLQVVEMVHSLLSKIGLMKVE----VLNSLIAAYCRNGRINWALQIFSNLP-- 452
++ + + + S + KI + E ++LI C GR++ AL++ +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 453 --YKSLISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHG 510
+LI+ N +++G NG + ++ T +PN
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN-------------------- 211
Query: 511 KQVHGYILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAM----VKRDTISWNALISA 566
E++ G L M K G ++ + M +K D + ++ +I
Sbjct: 212 --------------EVTYGPVLKVM-CKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 567 YAQHGQGKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFV 626
+ G A F M+I G + D +T ++ + G DDG ++ M+
Sbjct: 257 LCKDGSLDNAFNLFNEMEIK-GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK-RKIT 314
Query: 627 PSVDHFSCIVDLLGRSGYLEEAERLIK 653
P V FS ++D + G L EAE L K
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHK 341
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 169/408 (41%), Gaps = 27/408 (6%)
Query: 54 PDHYTLSTAITASANTRPAATATTFGNQLHAHAIRTGLKAHSHVANSLLSLYAKAEDLAS 113
P TL++ + + + A +Q+ + + + + L +E +A
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 114 VERAFAEIEYPDDYSWTTMLSASTRLGHVGDALKLFDQMPN---RSNVAVWNAIITRCGA 170
VER + PD ++ +++ + G AL L ++M ++V ++N II
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL-C 261
Query: 171 DNGHDDVAFDLFRDMQKIGVRPDGYTFTSMLSLCSVELLDFGRHVHSVVIRSGFLART-- 228
H D AFDLF M+ G++PD +T+ ++S L ++GR + + S L +
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC----LCNYGRWSDASRLLSDMLEKNIN 317
Query: 229 ---SVVNSLITMYFNCGCVVDAYQVFGEVEAG---LRDHVTYNAMIDGLVRVDRNEDAFV 282
N+LI + G +V+A +++ E+ D V YN +I G + R E+
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 283 MFRDMQKACFSPMEATFVSVMSSCSSLRVGCQAQ---AQSIKTGFDAYTAVNNATMTMYS 339
+FR+M + T+ +++ R AQ Q + G N +
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 340 CFGKVNEAQNIFERMEERDL----VSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEF 395
G V A +FE M++RD+ V++ MI + E + + G++P+
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 396 TYGSLLGASDSLQVVEMVHSLLSKIG----LMKVEVLNSLIAAYCRNG 439
TY +++ + E +L ++ L N+LI A R+G
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 210/501 (41%), Gaps = 60/501 (11%)
Query: 176 DVAFDLFRDMQKIGVRPDGYTFTSMLS-LCSVELLDFGRHVHSVVIRSGFLARTSVVNSL 234
D+ L MQ +G+ + YT++ ++ C L + +++ G+ +NSL
Sbjct: 92 DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSL 151
Query: 235 ITMYFNCGCVVDAYQVFGE-VEAGLR-DHVTYNAMIDGLVRVDRNEDAFVMFRDMQKACF 292
+ + + + +A + + VE G + D VT+ ++ GL + ++ +A + M
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM----- 206
Query: 293 SPMEATFVSVMSSCSSLRVGCQAQAQSIKTGFDAYTAVNNATMTMYSCFGKVNEAQNIFE 352
+ GCQ + Y AV N G+ + A N+
Sbjct: 207 ----------------VVKGCQPDLVT-------YGAVINGLCKR----GEPDLALNLLN 239
Query: 353 RME----ERDLVSWNIMISMFFQENLNETAILTYLKMRRVGIEPDEFTYGSLLGA----- 403
+ME E D+V +N +I + + A + KM GI+PD FTY L+
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 404 --SDSLQVVEMVHSLLSKIGLMKVEVLNSLIAAYCRNGRINWALQIFSNLP-----YKSL 456
SD+ + ++ +L K + N+LI A+ + G++ A +++ + + +
Sbjct: 300 RWSDASR---LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 457 ISWNTIISGFLTNGCPLQGLEQFSALLNTPLKPNAYXXXXXXXXXXXXXXXXHGKQVHGY 516
+++NT+I GF +G+E F + L N + + V
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 517 ILRHGFSSEISLGNALVTMYAKCGSLDGSLGVFNAMVKRD----TISWNALISAYAQHGQ 572
++ G +I N L+ G+++ +L VF M KRD +++ +I A + G+
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 573 GKEAVCCFEAMQISPGIEPDHATFTIVLSACSHVGLVDDGTRIFDMMVNIYGFVPSVDHF 632
++ F ++ + G++P+ T+T ++S GL ++ +F M G +P+ +
Sbjct: 477 VEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE-DGPLPNSGTY 534
Query: 633 SCIVDLLGRSGYLEEAERLIK 653
+ ++ R G + LIK
Sbjct: 535 NTLIRARLRDGDEAASAELIK 555