Miyakogusa Predicted Gene
- Lj0g3v0084739.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0084739.1 Non Chatacterized Hit- tr|K3XQA6|K3XQA6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si004088,41.46,0.000000000001,seg,NULL,CUFF.4468.1
(505 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G15860.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 497 e-141
AT2G15860.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 488 e-138
>AT2G15860.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has
30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr2:6905712-6909282
REVERSE LENGTH=512
Length = 512
Score = 497 bits (1280), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/474 (58%), Positives = 335/474 (70%), Gaps = 29/474 (6%)
Query: 45 LSDLQKAAAVAAEEISRNAAAVAQTASKSIAEL----EKXXXXXXXXXXXXXXXXXXXXX 100
LSDLQKAA E+ISRNAAAVA+ A+KSIAE+ E
Sbjct: 55 LSDLQKAA----EDISRNAAAVAEKAAKSIAEMGEVDEDSESSAKEEEKTEEADTEQDSD 110
Query: 101 XXXXXXXXXALDKLEKASDDSLLSQGLKVFDNSVETFASGAWSALGNALKGGTDLVHRLD 160
AL++LE AS++SLLSQGLKVFD+SVE+F SGAW A GNALKGGT LV +L+
Sbjct: 111 DENAKLKKSALERLEGASEESLLSQGLKVFDDSVESFTSGAWQAFGNALKGGTSLVQKLE 170
Query: 161 R-------PGAAGSNAPSLLETGKAFTAKGMQVLEYVGKETLDLLISETGIEVEKAKKEG 213
P AGS APSLLETGKA TAKGMQVLE+VGKET+DLLI+ETGI EK
Sbjct: 171 NSVQQGSSPREAGSGAPSLLETGKALTAKGMQVLEFVGKETMDLLITETGIGAEK----- 225
Query: 214 EKHNEEDQLSEEVTFDRCFYIYGGPEQLEELEALSSHYALLFNRRKAKLSAEQKSVFDGK 273
++ + +DQ+ EEVTFDRCFYIYGGPEQLEELEAL+SHY LLFNRRK KLS +QKS++DGK
Sbjct: 226 DRVDFKDQVLEEVTFDRCFYIYGGPEQLEELEALASHYTLLFNRRKGKLSPDQKSLYDGK 285
Query: 274 LKEVQQIFNLSTEIDRSSVDSDKGKTIKKGNEGSSDEMKNLHDSSVGKXXXXXXXXXXGF 333
LK++QQ+F+ + E+ S +SDKGK I EG+ D+MKNLH+SSV K GF
Sbjct: 286 LKQIQQLFSFADEMSGSKAESDKGKKIDIKTEGNDDDMKNLHNSSVSK----AADMATGF 341
Query: 334 TNVLTGLAVNDIIQRTTSRLESLHSEGVHRLSEMCCLAVSQLLMFGKSIISHANKTGXXX 393
TN L GL VND+IQRT RLESLHSEGVHRLSEMCC AV+ LL+ GKS+ISHANK
Sbjct: 342 TNALAGLHVNDMIQRTGGRLESLHSEGVHRLSEMCCFAVTHLLILGKSMISHANKV---Q 398
Query: 394 XXXXXXXXXXWPEDVSAKAKIIRINAQAVIGYVEAVSNSFITGISDVNEAYQAAIKGV-T 452
W ED + KAK+IR A+ + GYVEAVSNSFITGISDV+E Y AAIKGV
Sbjct: 399 DEDTEALKIEWAEDPTEKAKLIRGKAETMAGYVEAVSNSFITGISDVSETYSAAIKGVAA 458
Query: 453 AESHTGAPKTS-VQDKSKAFSEHLKADQTTAIRKIQDGMQFLAHVVLSTSMSAA 505
A+S KTS +Q+K+ F++ L++DQTTAI KIQ+G+Q+L++VV+STSM +A
Sbjct: 459 ADSKDDLLKTSTMQEKASTFNDSLRSDQTTAITKIQEGLQYLSYVVISTSMPSA 512
>AT2G15860.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 110
Blast hits to 109 proteins in 51 species: Archae - 0;
Bacteria - 4; Metazoa - 37; Fungi - 10; Plants - 37;
Viruses - 3; Other Eukaryotes - 19 (source: NCBI BLink).
| chr2:6905712-6909282 REVERSE LENGTH=524
Length = 524
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 277/486 (56%), Positives = 335/486 (68%), Gaps = 41/486 (8%)
Query: 45 LSDLQKAAAVAAEEISRNAAAVAQTASKSIAEL----EKXXXXXXXXXXXXXXXXXXXXX 100
LSDLQKAA E+ISRNAAAVA+ A+KSIAE+ E
Sbjct: 55 LSDLQKAA----EDISRNAAAVAEKAAKSIAEMGEVDEDSESSAKEEEKTEEADTEQDSD 110
Query: 101 XXXXXXXXXALDKLEKASDDSLLSQ------------GLKVFDNSVETFASGAWSALGNA 148
AL++LE AS++SLLSQ GLKVFD+SVE+F SGAW A GNA
Sbjct: 111 DENAKLKKSALERLEGASEESLLSQANLCSSICYFLLGLKVFDDSVESFTSGAWQAFGNA 170
Query: 149 LKGGTDLVHRLDR-------PGAAGSNAPSLLETGKAFTAKGMQVLEYVGKETLDLLISE 201
LKGGT LV +L+ P AGS APSLLETGKA TAKGMQVLE+VGKET+DLLI+E
Sbjct: 171 LKGGTSLVQKLENSVQQGSSPREAGSGAPSLLETGKALTAKGMQVLEFVGKETMDLLITE 230
Query: 202 TGIEVEKAKKEGEKHNEEDQLSEEVTFDRCFYIYGGPEQLEELEALSSHYALLFNRRKAK 261
TGI EK ++ + +DQ+ EEVTFDRCFYIYGGPEQLEELEAL+SHY LLFNRRK K
Sbjct: 231 TGIGAEK-----DRVDFKDQVLEEVTFDRCFYIYGGPEQLEELEALASHYTLLFNRRKGK 285
Query: 262 LSAEQKSVFDGKLKEVQQIFNLSTEIDRSSVDSDKGKTIKKGNEGSSDEMKNLHDSSVGK 321
LS +QKS++DGKLK++QQ+F+ + E+ S +SDKGK I EG+ D+MKNLH+SSV K
Sbjct: 286 LSPDQKSLYDGKLKQIQQLFSFADEMSGSKAESDKGKKIDIKTEGNDDDMKNLHNSSVSK 345
Query: 322 XXXXXXXXXXGFTNVLTGLAVNDIIQRTTSRLESLHSEGVHRLSEMCCLAVSQLLMFGKS 381
GFTN L GL VND+IQRT RLESLHSEGVHRLSEMCC AV+ LL+ GKS
Sbjct: 346 ----AADMATGFTNALAGLHVNDMIQRTGGRLESLHSEGVHRLSEMCCFAVTHLLILGKS 401
Query: 382 IISHANKTGXXXXXXXXXXXXXWPEDVSAKAKIIRINAQAVIGYVEAVSNSFITGISDVN 441
+ISHANK W ED + KAK+IR A+ + GYVEAVSNSFITGISDV+
Sbjct: 402 MISHANKV---QDEDTEALKIEWAEDPTEKAKLIRGKAETMAGYVEAVSNSFITGISDVS 458
Query: 442 EAYQAAIKGV-TAESHTGAPKTS-VQDKSKAFSEHLKADQTTAIRKIQDGMQFLAHVVLS 499
E Y AAIKGV A+S KTS +Q+K+ F++ L++DQTTAI KIQ+G+Q+L++VV+S
Sbjct: 459 ETYSAAIKGVAAADSKDDLLKTSTMQEKASTFNDSLRSDQTTAITKIQEGLQYLSYVVIS 518
Query: 500 TSMSAA 505
TSM +A
Sbjct: 519 TSMPSA 524