Miyakogusa Predicted Gene

Lj0g3v0084689.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0084689.1 Non Chatacterized Hit- tr|I1MTE9|I1MTE9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.69,0,UBX,UBX; no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAS-ASSOCIATED
PROTEIN,NULL; no description,,CUFF.4448.1
         (380 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10790.1 | Symbols:  | UBX domain-containing protein | chr4:6...   234   5e-62
AT4G11740.1 | Symbols: SAY1 | Ubiquitin-like superfamily protein...    74   1e-13
AT4G23040.1 | Symbols:  | Ubiquitin-like superfamily protein | c...    68   9e-12
AT4G00752.1 | Symbols:  | UBX domain-containing protein | chr4:3...    62   6e-10

>AT4G10790.1 | Symbols:  | UBX domain-containing protein |
           chr4:6640752-6643035 REVERSE LENGTH=480
          Length = 480

 Score =  234 bits (598), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 143/381 (37%), Positives = 205/381 (53%), Gaps = 16/381 (4%)

Query: 13  RITNLPQSIMGG----ISRAVGDGM----GFVGRGRRRNQQTYFXXXXXXXXXXXXDSIA 64
           RI  LP SI+ G    +S A+G G+    G +                         S A
Sbjct: 101 RIITLPISIVSGSLGLVSGAIGLGIWAAGGVLSYSLGMLGFRSGRGGGSESARLVSVSSA 160

Query: 65  VPEEWAFLDNFEQQYGTKHPF---FYACRFTEAMRLAQQDKKFMFMYLHSPDHPFTNAFC 121
           V E   F+  F++ YG+ + F   F    F +A++ ++   K +F+YLHSPDHP T  FC
Sbjct: 161 VGEAMEFVALFDRDYGSNNAFKIDFVVEGFMDALQRSRSSFKLLFVYLHSPDHPDTPVFC 220

Query: 122 KETLCSELVVQFLDVNFVCWGALADRGEGLQMVATLRPESFPCCALISQAPGDSIVVLQQ 181
             TLC+E VV F++ NFV WG      EG +M  +L+   FP CA++  A    I +LQQ
Sbjct: 221 GGTLCNEAVVAFVNENFVSWGGSIRSSEGFKMSNSLKASRFPFCAVVMPAANQRIALLQQ 280

Query: 182 LEVPVSPAELVEILQRTLEEQGVAFGSDRAKKEEKILADRRLREEQDAAYLAALQIDREK 241
           +E P SP E++ ILQR +E+      + R + EE+   + RLREEQDAAY AAL+ D+ +
Sbjct: 281 VEGPKSPEEMLAILQRIVEDSSPTLVTARVEAEER-RTNLRLREEQDAAYRAALEADQAR 339

Query: 242 ERLKNLPSRERVHKPVEGQNTINYGKLRNNSVDISKQHYKTNESSSEKQDKGIA---ARG 298
           E+ +    +ER+ +           +         +   +       +Q+K +A      
Sbjct: 340 EQQRQ-EEKERLEREAAEAERKLKEEEEARERAAREAEERQAARVRMRQEKALALGEEPE 398

Query: 299 SGSQATQILIRFPNGERREHTFLSTDKIQSIFSYIDSLGLLGIENYRLISNFPRKAYGVD 358
            G   TQ+L+RFPNGER+   F S  KIQ+++ Y+DSLGLL  E Y LI+NFPR  YG D
Sbjct: 399 KGPDVTQVLVRFPNGERKGRMFKSETKIQTLYDYVDSLGLLDTEEYSLITNFPRTVYGRD 458

Query: 359 QIRMTLKDAGLYPKASLFLEI 379
           +  M+LKDAGL+P+ASLF+EI
Sbjct: 459 KESMSLKDAGLHPQASLFIEI 479


>AT4G11740.1 | Symbols: SAY1 | Ubiquitin-like superfamily protein |
           chr4:7071955-7075256 FORWARD LENGTH=564
          Length = 564

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 20/176 (11%)

Query: 217 ILADRRLREEQDAAYLAALQIDREKERLKNLPSRERVHKPVEGQNT-----------INY 265
           + A R +RE+QD  Y+A+LQ DR+KE +K++  R+   + +E +                
Sbjct: 397 LTAQRLIREQQDDEYVASLQADRDKE-MKSI--RDAEARQLEEETARKAFLEEEKKKEEE 453

Query: 266 GKLRNNSVDISKQHYKTNESSSEKQDKGIAARGSGSQATQILIRFPNGERREHTFLSTDK 325
            + +       ++     E+S  K+      +     A  +LIR P+G RR   FL +DK
Sbjct: 454 AQRKLEEEQELERQLDAKEASLPKE-----PQADEENAITLLIRMPDGTRRGRRFLKSDK 508

Query: 326 IQSIFSYIDSLGLLGIENYRLISNFPRKAYGVDQIRMTLKDAGLYPK-ASLFLEIL 380
           +Q++F++ID   ++    YRL+  +PR A+G  +   TL D GL  K  +LFLE++
Sbjct: 509 LQTLFNFIDIARVVKPNTYRLVRPYPRHAFGDGESESTLNDLGLTSKQEALFLELI 564


>AT4G23040.1 | Symbols:  | Ubiquitin-like superfamily protein |
           chr4:12075672-12078622 REVERSE LENGTH=525
          Length = 525

 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 5/165 (3%)

Query: 217 ILADRRLREEQDAAYLAALQIDREKERLKNLPSRERVHKPVEGQNTINYGKLRNNSVDIS 276
           + A R +RE+QD  YLA+L+ DR K   + L       + +E          R    +  
Sbjct: 365 LTAQRLIREQQDDEYLASLEADRVKAEARRLEEEAARVEAIEEAKRKEEEARRKVEEEQE 424

Query: 277 KQHYKTNESSSEKQDKGIAARGSGSQATQILIRFPNGERREHTFLSTDKIQSIFSYIDSL 336
            +    ++ +S  Q+           A  + +R P+G R    F  +DK+QS+F +ID  
Sbjct: 425 LERQLVSKEASLPQEPPAGEE----NAITLQVRLPDGTRHGRRFFKSDKLQSLFDFIDIC 480

Query: 337 GLLGIENYRLISNFPRKAYGVDQIRMTLKDAGLYPK-ASLFLEIL 380
            ++    YRL+  +PR+A+G  +   TL D GL  K  +LFLE++
Sbjct: 481 RVVKPNTYRLVRPYPRRAFGDGECSSTLNDIGLTSKQEALFLELI 525


>AT4G00752.1 | Symbols:  | UBX domain-containing protein |
           chr4:317771-320793 REVERSE LENGTH=469
          Length = 469

 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%)

Query: 264 NYGKLRNNSVDISKQHYKTN-----ESSSEKQDKGIAARGSGSQATQILIRFPNGERREH 318
           N     NN + I K+    N     E    K    I   G    A  +L+R P+  R   
Sbjct: 346 NESASHNNQLGIHKESQSPNQRVVREEPERKAALPIEPSGENEDAITLLVRMPDSSRHGR 405

Query: 319 TFLSTDKIQSIFSYIDSLGLLGIENYRLISNFPRKAYGVDQIRMTLKDAGLYPK-ASLFL 377
            FL +DK++ +F +ID+ GL+    YR++  +PR+A+ +    +T ++  L  K  +LFL
Sbjct: 406 RFLKSDKLKYLFDFIDAAGLVKPGTYRVVRPYPRRAFSIQDGALTFEELSLTNKQEALFL 465

Query: 378 EIL 380
           E+L
Sbjct: 466 ELL 468