Miyakogusa Predicted Gene

Lj0g3v0084279.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0084279.1 Non Chatacterized Hit- tr|K3Y9L2|K3Y9L2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010904,32.93,1e-18,seg,NULL,CUFF.4418.1
         (260 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G43630.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   156   1e-38
AT3G59640.2 | Symbols:  | glycine-rich protein | chr3:22029101-2...   116   2e-26
AT3G59640.1 | Symbols:  | glycine-rich protein | chr3:22029101-2...   116   2e-26

>AT2G43630.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           chloroplast thylakoid membrane, chloroplast, nucleus,
           chloroplast envelope; EXPRESSED IN: 22 plant structures;
           EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
           thaliana protein match is: glycine-rich protein
           (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in
           20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi
           - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2
           (source: NCBI BLink). | chr2:18096255-18097344 FORWARD
           LENGTH=274
          Length = 274

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 134/256 (52%), Gaps = 14/256 (5%)

Query: 1   MNTAQVTAWQPGICVKNISQLHQLDTTP--CILPMNTHPRSRIVMKLREKPSFGF----- 53
           M+  Q   ++P      I++ + + + P    +  +  PR+   ++     S  F     
Sbjct: 1   MSFTQANCFRPSYYPARITRPNCISSVPIRSSVRFDHFPRTSFTLRATAAVSTQFSPLLD 60

Query: 54  --KCLPILKSRKPLRICFAGGEGMMGDNDENSPWKSIEKAMEKFKGQSIEDVLRQQIQKG 111
             + LP  KS++   +C  GG+     +DE SPWK+IEKAM K   +S+ED+LR+QIQK 
Sbjct: 61  HRRRLPTGKSKQSSAVCLFGGKDKPDGSDEISPWKAIEKAMGK---KSVEDMLREQIQKK 117

Query: 112 EYFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FAEMLDENLQVILATLGFIFLY 169
           +++                                    A + DE LQV+LATLGFIFLY
Sbjct: 118 DFYDTDSGGNMPPRGGGSGGGGGNGEERPEGSGGEDGGLAGIADETLQVVLATLGFIFLY 177

Query: 170 IYILTGEELTKLARDYIKYLFGGSQSVRLKTAMVKWGQIYRSMTTKKEVDEFWLERAIMN 229
            YI+TGEEL KLARDYI++L G  ++VRL  AM  W      M+ ++  DE+WLE+AI+N
Sbjct: 178 TYIITGEELVKLARDYIRFLMGRPKTVRLTRAMDSWNGFLEKMSRQRVYDEYWLEKAIIN 237

Query: 230 TPTWWYDPEDLREALR 245
           TPTW+  PE  R  ++
Sbjct: 238 TPTWYDSPEKYRRVIK 253


>AT3G59640.2 | Symbols:  | glycine-rich protein |
           chr3:22029101-22030300 FORWARD LENGTH=246
          Length = 246

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 111/232 (47%), Gaps = 14/232 (6%)

Query: 1   MNTAQVTAWQPGICVKNISQLHQLDTTPCI--LPMNTHPRSRIVMKLREKPSFGFKCLPI 58
           M++ Q    +P +     +Q   + + P +  L  +  P  ++ ++     S   +  P+
Sbjct: 1   MSSTQANLCRPSLFCARTTQTRHVSSAPFMSSLRFDYRPLPKLAIRASASSSMSSQFSPL 60

Query: 59  LKSR------KPLRICFAGGEGMMGDNDENSPWKSIEKAMEKFKGQSIEDVLRQQIQKGE 112
              R       P+     G +   G N+ +S W++IEKAM K   +S+ED+LR+QIQK +
Sbjct: 61  QNHRCRNQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAMGK---KSVEDMLREQIQKKD 117

Query: 113 YFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAEMLDENLQVILATLGFIFLYIYI 172
                                              F    DE LQV+LATLGFIFLY YI
Sbjct: 118 TGGIPPRGRGGGGGGRNGGNNGSGGSSGEDGGLASFG---DETLQVVLATLGFIFLYFYI 174

Query: 173 LTGEELTKLARDYIKYLFGGSQSVRLKTAMVKWGQIYRSMTTKKEVDEFWLE 224
           + GEEL +LARDYI+YL G  +SVRL   M  W + +  M+ KK  +E+WL+
Sbjct: 175 INGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMSRKKVYNEYWLK 226


>AT3G59640.1 | Symbols:  | glycine-rich protein |
           chr3:22029101-22030300 FORWARD LENGTH=246
          Length = 246

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 111/232 (47%), Gaps = 14/232 (6%)

Query: 1   MNTAQVTAWQPGICVKNISQLHQLDTTPCI--LPMNTHPRSRIVMKLREKPSFGFKCLPI 58
           M++ Q    +P +     +Q   + + P +  L  +  P  ++ ++     S   +  P+
Sbjct: 1   MSSTQANLCRPSLFCARTTQTRHVSSAPFMSSLRFDYRPLPKLAIRASASSSMSSQFSPL 60

Query: 59  LKSR------KPLRICFAGGEGMMGDNDENSPWKSIEKAMEKFKGQSIEDVLRQQIQKGE 112
              R       P+     G +   G N+ +S W++IEKAM K   +S+ED+LR+QIQK +
Sbjct: 61  QNHRCRNQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAMGK---KSVEDMLREQIQKKD 117

Query: 113 YFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAEMLDENLQVILATLGFIFLYIYI 172
                                              F    DE LQV+LATLGFIFLY YI
Sbjct: 118 TGGIPPRGRGGGGGGRNGGNNGSGGSSGEDGGLASFG---DETLQVVLATLGFIFLYFYI 174

Query: 173 LTGEELTKLARDYIKYLFGGSQSVRLKTAMVKWGQIYRSMTTKKEVDEFWLE 224
           + GEEL +LARDYI+YL G  +SVRL   M  W + +  M+ KK  +E+WL+
Sbjct: 175 INGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMSRKKVYNEYWLK 226