Miyakogusa Predicted Gene

Lj0g3v0083759.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0083759.1 Non Chatacterized Hit- tr|C4J972|C4J972_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,48.39,0.0000000000001,seg,NULL,CUFF.4396.1
         (540 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64930.1 | Symbols: CPR5, HYS1 | CPR5 protein, putative | chr...   320   1e-87

>AT5G64930.1 | Symbols: CPR5, HYS1 | CPR5 protein, putative |
           chr5:25945885-25948321 REVERSE LENGTH=564
          Length = 564

 Score =  320 bits (821), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 174/455 (38%), Positives = 265/455 (58%), Gaps = 23/455 (5%)

Query: 80  PLGMSFAAVLAQVLYRRDAAAESMSPSHLSSMCTSAIKESLASVFGDKLDGLTRNFEESF 139
           PLG S AA    V+ R++AA +++    L  +  + ++ESLA+V+G+KL     NFE++F
Sbjct: 118 PLGFSLAAFANMVIARKNAAGQNVYVDDLVEIFATLVEESLANVYGNKLGSFATNFEQTF 177

Query: 140 DSTLSTLRLIYETSTRNERNKFDNMKMEIPNTDLSKGDCSSDVVSEDGHSG-PISRAKIQ 198
            STL  L+L  E +  ++ N  D             G C+ D  + DG S   +   +  
Sbjct: 178 SSTLKILKLTNECANPHQSNNNDG------------GSCNLDRSTIDGCSDTELFERETS 225

Query: 199 DQSNSPEEVRDNFHMDSVSRGLTLHGKSNQVVCFSPTSSGSVINNPIVSTYEKSIVEQCR 258
             +++ E ++ +    S+   L L  ++ Q+ C  P SS   +     +T E+ + EQ R
Sbjct: 226 SATSAYEVMQGSATATSLMNELALFEETLQLSCVPPRSSAMAL-----TTDERFLKEQTR 280

Query: 259 SNELKTIELGLTMKKLQLKKTELALHYDLNNLERSKLAMGASKASFRAEKFKNQLEDMRH 318
           +N+LKT+E+GL +++L+ K+T L L ++ NNL ++ L +  SKA+FRAEKFK +LED R 
Sbjct: 281 ANDLKTVEIGLQIRELRCKETALGLKFESNNLGKAALELDVSKAAFRAEKFKTELEDTRK 340

Query: 319 GELNKKCIDCLIAGLFIMXXXXXXXXXXXXXKQITEATETCTPLEE-SSSWWTPKSVVWF 377
            E+  + +D L+  +F M             K+I +AT  C   EE SSSWW PK V   
Sbjct: 341 EEMVTRIMDWLLVSVFSMLASMVLGVYNFSIKRIEDATSVCDQSEEKSSSWWVPKQVSSI 400

Query: 378 NSGLHVLWCQVQVISRMLFGVIMIFAVAYLLIQRSAASSTQTMPVTFILLMLGIGCGYCG 437
           NSG +   C+V+V  ++ FGV+MI    Y L +RS+ +  QTMP++FI+L LGI CG  G
Sbjct: 401 NSGFNTFICRVRVWVQIFFGVLMIIVFTYFLNKRSSGTK-QTMPISFIVLFLGIFCGVSG 459

Query: 438 KLCVDTLGGSGYVWLSYWEILCLLHFLSIGFTSILYSILHGPLTKLQSSKE---NTIFPY 494
           KLCVDTLGG G +WL  WE+ CLL F++  FT  LY ++ GP+   Q ++    N++FPY
Sbjct: 460 KLCVDTLGGDGKLWLIVWEVFCLLQFVANVFTLALYGLMFGPINVTQETRSNRCNSMFPY 519

Query: 495 WIRRILFYGTLLVVLPLCCGFLPFASIGQWKEYFM 529
           W RR + Y  +L VLP+  G LPFA+ G+W+++ M
Sbjct: 520 WARRSVVYVVILFVLPVINGLLPFATFGEWRDFAM 554