Miyakogusa Predicted Gene

Lj0g3v0082919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0082919.1 Non Chatacterized Hit- tr|Q2PEP4|Q2PEP4_TRIPR
Putative uncharacterized protein (Fragment)
OS=Trifoli,79.48,0,Nucleotidyltransferase,NULL; PAP/OAS1
substrate-binding domain,NULL; seg,NULL;
TOPOISOMERASE-RELATED,CUFF.4351.1
         (536 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53770.1 | Symbols:  | Nucleotidyltransferase family protein ...   555   e-158
AT4G00060.1 | Symbols: MEE44 | Nucleotidyltransferase family pro...    85   1e-16
AT2G45620.1 | Symbols:  | Nucleotidyltransferase family protein ...    71   2e-12
AT2G39740.1 | Symbols:  | Nucleotidyltransferase family protein ...    62   1e-09

>AT5G53770.1 | Symbols:  | Nucleotidyltransferase family protein |
           chr5:21826733-21829858 FORWARD LENGTH=530
          Length = 530

 Score =  555 bits (1430), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 296/465 (63%), Positives = 353/465 (75%), Gaps = 14/465 (3%)

Query: 14  FLYETLPPLSSSTAAVDKSPPSDHHEP--LSVFRSEISLSTVHCASPDSAAPDFFSLDVA 71
           F+Y+TLPPLS S +  ++SPP  H E    SVFR EIS         +SA  DFFSLDV 
Sbjct: 13  FVYDTLPPLSFSDS--NQSPPPTHEESHQYSVFRKEISDFPDDTTPVESATVDFFSLDVE 70

Query: 72  GEDSP-GRDPLPEPVTLSEPKTPALAP---KPTLESNWFRGDCKFRSPMLQLHKEIVDFC 127
           GE +  G +P+  PV ++  K         +P LESNWF  +   + PMLQLHKEIVDFC
Sbjct: 71  GETTENGVEPV-TPVVVASKKKSKKRKKDEEPRLESNWFSENSFSKIPMLQLHKEIVDFC 129

Query: 128 EFLSPTPEEKAARDMAIASVSDVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKAGLP 187
           +FL PT  EKA RD A+ SVS VIK+IWP C+VEVFGS++TGLYLPTSDIDVVIL++GL 
Sbjct: 130 DFLLPTQAEKAERDAAVESVSSVIKYIWPSCKVEVFGSYKTGLYLPTSDIDVVILESGLT 189

Query: 188 NPQMGLNAISRSLSQRGIAKKIQVIGKARVPIIKFVEKRSGVAFDISFDIDNGPKAAEYI 247
           NPQ+GL A+SR+LSQRGIAK + VI KARVPIIKFVEK+S +AFD+SFD++NGPKAAE+I
Sbjct: 190 NPQLGLRALSRALSQRGIAKNLLVIAKARVPIIKFVEKKSNIAFDLSFDMENGPKAAEFI 249

Query: 248 QEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYXXXXXXXXXXRNLRQSQVSAEHN 307
           Q+AV+K PPLRPLCLILKVFLQQRELNEVYSGGIGSY          + L+  + + EHN
Sbjct: 250 QDAVSKLPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAFLKYLKDGRSAPEHN 309

Query: 308 LGLLLVHFFDFYGRKLNTADVGVSCNGAGTFFRKSSKGFANKGRPFLIGIEDPQAPENDV 367
           LG+LLV FFDFYGRKLNTADVG+SC   G+FF K +KGF N+ RP LI IEDPQ PEND+
Sbjct: 310 LGVLLVKFFDFYGRKLNTADVGISCKMGGSFFSKYNKGFLNRARPSLISIEDPQTPENDI 369

Query: 368 GKNSYNYFQIRSAFAMAFSTLTDPKIILSLGPKRSILGTIIRPDPNLIERKGGLNGEVTF 427
           GK+S+NYFQIRSAFAMA STLT+ K ILSLGP RSILGTIIRPD  L ERKGG NG+VTF
Sbjct: 370 GKSSFNYFQIRSAFAMALSTLTNTKAILSLGPNRSILGTIIRPDRVLSERKGGQNGDVTF 429

Query: 428 NSLLPGAGEPI-QQKFGEQD--MLCNWQLDDEEEL--LPRGVDTS 467
           NSLLPGAGEP+  +  G+ +  + CNW+L++EEE    PRG D +
Sbjct: 430 NSLLPGAGEPLPLESNGKTNGGLFCNWELEEEEEEGSFPRGNDIT 474


>AT4G00060.1 | Symbols: MEE44 | Nucleotidyltransferase family protein
            | chr4:21437-27996 FORWARD LENGTH=1481
          Length = 1481

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 7/164 (4%)

Query: 229  VAFDISFDI--DNGPKAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYXX 286
            V  DISF      G +  + +++   ++P   PL L+LK FL  R L++ YSGG+ SY  
Sbjct: 1292 VRLDISFKTPSHTGLQTTQLVKDLTEQFPAATPLALVLKQFLADRTLDQSYSGGLSSYCL 1351

Query: 287  XXXXXXXXRNLRQSQVSAEHNLGLLLVHFFDFYGRKLNTADVGVSCNGAGTFFRKSSKGF 346
                    ++      S   NLG LL+ F  F+G   +   + VS  G+G  +R   +G+
Sbjct: 1352 VLLITRFLQHEHHLGRSINQNLGGLLMDFLYFFGNVFDPRQMRVSVQGSG-IYRNRERGY 1410

Query: 347  ANKGRPFLIGIEDPQAPENDVGKNSYNYFQIRSAFAMAFSTLTD 390
            +       I I+DP  P N+VG+N +   Q   AF+ A+S L +
Sbjct: 1411 SIDP----IHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLEN 1450


>AT2G45620.1 | Symbols:  | Nucleotidyltransferase family protein |
           chr2:18792943-18795750 FORWARD LENGTH=764
          Length = 764

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 10/160 (6%)

Query: 130 LSPTPEEKAARDMAIASVSDVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKAGLP-N 188
           L P  EE   +   +A + +++   WPH ++ ++GS       P SDIDV +   G   N
Sbjct: 445 LIPAEEELEKQRQLMAHLENLVAKEWPHAKLYLYGSCANSFGFPKSDIDVCLAIEGDDIN 504

Query: 189 PQMGLNAISRSLSQRGIAKKIQVIGKARVPIIKFVEKRSGVAFDISFD----IDNGPKAA 244
               L  ++  L    + + +Q + +ARVPI+K ++  +G++ DI  +    + N     
Sbjct: 505 KSEMLLKLAEILESDNL-QNVQALTRARVPIVKLMDPVTGISCDICINNVLAVVNTKLLR 563

Query: 245 EYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSY 284
           +Y Q  V     LR L  I+K + + R +NE Y G + SY
Sbjct: 564 DYAQIDVR----LRQLAFIVKHWAKSRRVNETYQGTLSSY 599


>AT2G39740.1 | Symbols:  | Nucleotidyltransferase family protein |
           chr2:16576250-16578704 FORWARD LENGTH=511
          Length = 511

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 26/188 (13%)

Query: 112 FRSPMLQLHKEIVDFCEFLSPTPEEKAARDMAIASVSDVIKHIWPHC----QVEVFGSFR 167
           F  P LQ      +  + + PT  ++  R   I  + DV++ +   C     V+ FGSF 
Sbjct: 6   FLDPTLQ------EILQVIKPTRADRDTRITVIDQLRDVLQSV--ECLRGATVQPFGSFV 57

Query: 168 TGLYLPTSDIDVV--------ILKAGLPNPQMGLNAISRSLSQRGIAKKIQVIGKARVPI 219
           + L+    D+D+         IL  G    Q  L  + R+L   G+  K+Q +  ARVPI
Sbjct: 58  SNLFTRWGDLDISVDLFSGSSILFTGKKQKQTLLGHLLRALRASGLWYKLQFVIHARVPI 117

Query: 220 IKFVEKRSGVAFDISFDIDNGPKAAE---YIQEAVAKWPPLRPLCLILKVFLQQRELNEV 276
           +K V     ++ DIS D  +G   +    +I E   +    R L L++K + +   +N+ 
Sbjct: 118 LKVVSGHQRISCDISIDNLDGLLKSRFLFWISEIDGR---FRDLVLLVKEWAKAHNINDS 174

Query: 277 YSGGIGSY 284
            +G   SY
Sbjct: 175 KTGTFNSY 182