Miyakogusa Predicted Gene
- Lj0g3v0082219.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0082219.1 tr|F5CAD7|F5CAD7_FUNHY Pentatricopeptide repeat
protein 43 OS=Funaria hygrometrica PE=2 SV=1,33.52,3e-18,seg,NULL;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repea,CUFF.4281.1
(420 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 214 1e-55
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 209 2e-54
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 4e-54
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 5e-54
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 9e-54
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 5e-52
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 1e-51
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 5e-51
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 197 1e-50
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 6e-50
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 7e-50
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 2e-49
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 8e-49
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 190 2e-48
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 190 2e-48
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 8e-48
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 186 2e-47
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 186 3e-47
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 184 7e-47
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 184 1e-46
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 6e-46
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 8e-46
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 8e-46
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 180 1e-45
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 2e-45
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 6e-45
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 178 7e-45
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 9e-45
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 177 1e-44
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 4e-44
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 175 4e-44
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 7e-43
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 169 5e-42
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 168 5e-42
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 8e-42
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 8e-42
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 8e-42
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 4e-41
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 6e-41
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 8e-41
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 164 1e-40
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 163 3e-40
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 3e-40
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 5e-40
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 161 1e-39
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 160 2e-39
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 3e-39
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 6e-39
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 157 1e-38
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 157 2e-38
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 3e-38
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 3e-38
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 4e-38
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 154 1e-37
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 1e-37
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 1e-37
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 2e-37
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 6e-37
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 8e-37
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 2e-36
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 5e-36
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 6e-36
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 148 7e-36
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 4e-35
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 7e-35
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 1e-33
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 140 2e-33
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 6e-33
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 138 7e-33
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 136 3e-32
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 4e-32
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 2e-31
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 7e-31
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 9e-31
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 130 2e-30
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 6e-30
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 128 7e-30
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 127 1e-29
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 127 2e-29
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 126 3e-29
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 8e-28
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 117 2e-26
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 2e-26
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 8e-25
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 103 2e-22
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 8e-20
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 93 4e-19
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 87 3e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 7e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 82 5e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 80 3e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 77 2e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 76 5e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 76 5e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 7e-14
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 70 2e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 70 3e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 68 1e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 67 2e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 2e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 67 2e-11
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 67 3e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 66 4e-11
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 4e-10
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 7e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 57 2e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 57 3e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 6e-07
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 50 2e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 50 4e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 49 4e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 199/385 (51%), Gaps = 8/385 (2%)
Query: 42 FQSFTKPPISYTN------LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYS 95
F+ + K I +TN LL+ C LG ++H ++++ G + + LV Y+
Sbjct: 171 FEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYA 229
Query: 96 KCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFP 155
+CG A + D E DV+ SW+A+IS + G G +A+ F M NEFT
Sbjct: 230 QCGELTSALRAFDMMEEKDVI-SWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVC 288
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP 215
S+LKACS +K L GR+VH + V +D FV +L+ MYAKCG++ D RK+F +
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 216 SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXX 275
+ V+W ++ + + + F EA+ LF+ M R + N ++ IL AC +
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELH 408
Query: 276 XXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECND 335
+ + + LV +Y K G +A V +++ D+VSW A+I+GC
Sbjct: 409 AQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHES 468
Query: 336 WALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLI 395
AL L EM G PN FT SSALKACA +GR +HS K S+ FV LI
Sbjct: 469 EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALI 528
Query: 396 DMYSKCEMLSDARRVYELMPKKDII 420
MY+KC +S+A RV++ MP+K+++
Sbjct: 529 HMYAKCGFVSEAFRVFDSMPEKNLV 553
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 188/378 (49%), Gaps = 3/378 (0%)
Query: 44 SFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
SF + Y L +S + L +HA ++ F N+L+S + G YA
Sbjct: 77 SFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYA 136
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVK-CNEFTFPSVLKACS 162
RK+ D E + V +W+A+I GY++ G EA F D G++ NE F +L CS
Sbjct: 137 RKVFDSMPEKNTV-TWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCS 195
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
+ + +GR+VHG V G + V ++LV YA+CG+L + + F + V+SW A
Sbjct: 196 RRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTA 254
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
+ S + ++A+ +F M+ PNEF++ IL AC+ +
Sbjct: 255 VISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM 314
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLN 342
D F +L+DMY+K G I + VF+ +++ + V+W ++IA + + A++L
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 343 EMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCE 402
MK N T+ S L+AC +VG LG++LH+ +IK + + ++ L+ +Y KC
Sbjct: 375 IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCG 434
Query: 403 MLSDARRVYELMPKKDII 420
DA V + +P +D++
Sbjct: 435 ESRDAFNVLQQLPSRDVV 452
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 163/337 (48%), Gaps = 1/337 (0%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F + ++L C K+L G ++H+ +++ D L+ +Y+KCG R
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
K+ D + + V +W+++I+ + + GFG+EA+ F M + N T S+L+AC
Sbjct: 340 KVFDGMSNRNTV-TWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSV 398
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
L +G+++H + + + ++ +TLV +Y KCG+ D+ + + + VVSW A+
Sbjct: 399 GALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMI 458
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
S EA+D KEM++ G+ PN F+ S L ACA +
Sbjct: 459 SGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL 518
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+ F +AL+ MY+K G + A VF+ + ++VSW A+I G ++ AL L+ M
Sbjct: 519 SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
++ G + + ++ L C + + +C ++
Sbjct: 579 EAEGFEVDDYIFATILSTCGDIELDEAVESSATCYLE 615
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 206/373 (55%), Gaps = 3/373 (0%)
Query: 49 PISY--TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P+ Y T LL C L +G E+H L++ GFS D L ++Y+KC + ARK+
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
D+ E D+V SW+ +++GY QNG + AL MC +K + T SVL A S +
Sbjct: 193 FDRMPERDLV-SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
+++G+++HG ++ +GFDS ++ LV MYAKCG L +R+LF ++ +VVSWN++
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
YVQ++ EA+ +F++M+ G++P + S+ L+ACA L + +
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
N+L+ MY K ++ A ++F ++ +VSWNA+I G Q+ AL ++M+S
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSD 406
P+ FT S + A A + + +H +++ D + FV L+DMY+KC +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 407 ARRVYELMPKKDI 419
AR ++++M ++ +
Sbjct: 492 ARLIFDMMSERHV 504
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 191/385 (49%), Gaps = 6/385 (1%)
Query: 39 SQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCG 98
S C ++ I+ ++L A + +++G E+H + +R GF + LV +Y+KCG
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 99 RFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVL 158
AR+L D E +VV SW+++I YVQN KEA+L F M GVK + + L
Sbjct: 286 SLETARQLFDGMLERNVV-SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 159 KACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVV 218
AC+ DL GR +H +SV G D + V N+L+ MY KC ++ + +FG + + ++V
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
SWNA+ + Q+ ++A++ F +M ++P+ F+ ++ A A L
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL 338
+ F ALVDMY+K G I A +F+ ++ + +WNA+I G H AL
Sbjct: 465 MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAAL 524
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLI 395
L EM+ PN T S + AC+ G + G + + + I+ D + A ++
Sbjct: 525 ELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA--MV 582
Query: 396 DMYSKCEMLSDARRVYELMPKKDII 420
D+ + L++A MP K +
Sbjct: 583 DLLGRAGRLNEAWDFIMQMPVKPAV 607
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 182/366 (49%), Gaps = 4/366 (1%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
LL +C + K L + L + + G + F+ LVSL+ + G A + V + ++
Sbjct: 43 LLERCSSLKELRQILPL---VFKNGLYQEHFFQTKLVSLFCRYGSVDEAAR-VFEPIDSK 98
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
+ V + ++ G+ + +AL F M V+ + F +LK C + +L +G+++H
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV 234
G+ V +GF D F L MYAKC Q+ ++RK+F + +VSWN + + Y Q+
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
A+++ K M ++P+ ++ +L A + LR S + ALV
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 295 DMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVF 354
DMY+K G +E A +F+ + ++VSWN++I VQ+E A+ + +M G P
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 355 TISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELM 414
++ AL ACA +G + GR +H +++ D + V LI MY KC+ + A ++ +
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 415 PKKDII 420
+ ++
Sbjct: 399 QSRTLV 404
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 8/296 (2%)
Query: 47 KPP-ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
KP +S L C L G +H + G + S N L+S+Y KC A
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
+ + ++ +VSW+A+I G+ QNG +AL F+ M VK + FT+ SV+ A +
Sbjct: 394 MFGK-LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
+ + +HG+ + + D + FV LV MYAKCG + +R +F + V +WNA+
Sbjct: 453 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXX 282
Y F A++LF+EM +G I+PN + +++AC +GL G
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 572
Query: 283 XXXDQFSANALVDMYSKGGRIENAVA-VFEEITHPDIVSWNAVIAGCVQHECNDWA 337
D + A+VD+ + GR+ A + + P + + A++ C H+ ++A
Sbjct: 573 LSMDHYG--AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 133/279 (47%), Gaps = 11/279 (3%)
Query: 147 VKCNEFTFPS--VLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
+ N + P+ +L+ CS K+L R++ + G + F LV ++ + G + +
Sbjct: 31 IPANVYEHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 205 SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC-- 262
+ ++F I + V ++ + + + +A+ F M + P ++ + +L C
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 263 -AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSW 321
A LR G D F+ L +MY+K ++ A VF+ + D+VSW
Sbjct: 148 EAELRVGKEIHGLLVKSGFSL---DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 322 NAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
N ++AG Q+ AL ++ M P+ TI S L A +A+ +G+++H ++
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 382 IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
DS ++ L+DMY+KC L AR++++ M +++++
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVV 303
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 199/359 (55%), Gaps = 2/359 (0%)
Query: 63 KSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSAL 122
+S+ G +LH +++ GF S N LV+ Y K R ARK+ D+ TE DV+ SW+++
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI-SWNSI 267
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGF 182
I+GYV NG ++ L F M + G++ + T SV C+ + +++GR VH + V F
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
+ NTL+ MY+KCG L ++ +F + SVVS+ ++ + Y + EAV LF+E
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
M GI P+ ++++ +LN CA R D F +NAL+DMY+K G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLN-EMKSSGACPNVFTISSALK 361
++ A VF E+ DI+SWN +I G ++ + AL+L N ++ P+ T++ L
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 362 ACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
ACA++ D GR++H +++ SD VA L+DMY+KC L A +++ + KD++
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 190/372 (51%), Gaps = 1/372 (0%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P + ++L C SKSL G E+ + GF D + + L +Y+ CG A ++ D
Sbjct: 94 PRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD 153
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+ + + + W+ L++ ++G ++ F M GV+ + +TF V K+ S + ++
Sbjct: 154 E-VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G ++HG + +GF V N+LV Y K ++ +RK+F + V+SWN++ + YV
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
+ + + +F +M+ GI + ++ + CA R S +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
N L+DMYSK G +++A AVF E++ +VS+ ++IAG + A+ L EM+ G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
P+V+T+++ L CA D G+++H + + D D FV+ L+DMY+KC + +A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 409 RVYELMPKKDII 420
V+ M KDII
Sbjct: 453 LVFSEMRVKDII 464
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 189/369 (51%), Gaps = 11/369 (2%)
Query: 53 TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
++ + C S+ ++LG +H+ ++ FS + F N L+ +YSKCG A+ + + ++
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK 172
VV S++++I+GY + G EA+ F +M G+ + +T +VL C+ + L+ G++
Sbjct: 360 RSVV-SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 418
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDF 232
VH D FV+N L+ MYAKCG + ++ +F + ++SWN + Y ++ +
Sbjct: 419 VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY 478
Query: 233 CVEAVDLFKEMVRGG-IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
EA+ LF ++ P+E +++ +L ACA L D+ AN
Sbjct: 479 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN 538
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
+LVDMY+K G + A +F++I D+VSW +IAG H A+AL N+M+ +G
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 598
Query: 352 NVFTISSALKACAAVGFKDLGRQL-----HSCLIKIDTDSDFFVAVGLIDMYSKCEMLSD 406
+ + S L AC+ G D G + H C KI+ + + + +DM ++ L
Sbjct: 599 DEISFVSLLYACSHSGLVDEGWRFFNIMRHEC--KIEPTVEHYACI--VDMLARTGDLIK 654
Query: 407 ARRVYELMP 415
A R E MP
Sbjct: 655 AYRFIENMP 663
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 136/286 (47%), Gaps = 12/286 (4%)
Query: 53 TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
T +L+ C + L G +H + D N L+ +Y+KCG A +LV
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA-ELVFSEMR 459
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVK---CNEFTFPSVLKACSIKKDLNM 169
++SW+ +I GY +N + EAL FN +L K +E T VL AC+ +
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFN--LLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
GR++HG + G+ SD VAN+LV MYAKCG L + LF I + +VSW + + Y
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRN-GSXXXXXXXXXXXXXXXXD 286
F EA+ LF +M + GI +E S +L AC +GL + G +
Sbjct: 578 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 637
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQH 331
++ +VDM ++ G + A E + PD W A++ GC H
Sbjct: 638 HYA--CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 186/355 (52%), Gaps = 7/355 (1%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G+++H +++ G N L++LY KCG AR L D+ TE VV+W+++ISGY
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK-TEVKSVVTWNSMISGYA 271
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
NG EAL F M + V+ +E +F SV+K C+ K+L ++H V GF D
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
+ L+V Y+KC + D+ +LF I +VVSW A+ S ++Q+D EAVDLF EM R
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
G+RPNEF+ S+IL A + AL+D Y K G++E A
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTV----GTALLDAYVKLGKVEEA 447
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
VF I DIV+W+A++AG Q + A+ + E+ G PN FT SS L CAA
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 367 GFK-DLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
G+Q H IK DS V+ L+ MY+K + A V++ +KD++
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV 562
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 185/373 (49%), Gaps = 18/373 (4%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S+ +++ C K L +LH ++++GF D + R L+ YSKC A +L +
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
VVSW+A+ISG++QN +EA+ F++M GV+ NEFT+ +L A +
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP---- 412
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+VH V T ++ V L+ Y K G++ ++ K+F I +V+W+A+ + Y Q+
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF-- 288
A+ +F E+ +GGI+PNEF+ S ILN CA N S D
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT-NASMGQGKQFHGFAIKSRLDSSLC 531
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
++AL+ MY+K G IE+A VF+ D+VSWN++I+G QH AL + EMK
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG------LIDMYSKCE 402
+ T AC G + G + +++ D +A ++D+YS+
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR-----DCKIAPTKEHNSCMVDLYSRAG 646
Query: 403 MLSDARRVYELMP 415
L A +V E MP
Sbjct: 647 QLEKAMKVIENMP 659
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 177/355 (49%), Gaps = 6/355 (1%)
Query: 67 LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
G +LH I+FGF D S LV Y K F RK+ D+ E +VV +W+ LISGY
Sbjct: 111 FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV-TWTTLISGY 169
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
+N E L F M G + N FTF + L + + G +VH + V G D
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
V+N+L+ +Y KCG + +R LF SVV+WN++ S Y + +EA+ +F M
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
+R +E S + ++ CA L+ DQ AL+ YSK + +A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 307 VAVFEEIT-HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
+ +F+EI ++VSW A+I+G +Q++ + A+ L +EMK G PN FT S L A
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 366 VGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ ++H+ ++K + + V L+D Y K + +A +V+ + KDI+
Sbjct: 410 IS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 460
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 138/267 (51%), Gaps = 6/267 (2%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
E+HA +++ + + L+ Y K G+ A K+ + D+V +WSA+++GY Q
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV-AWSAMLAGYAQT 472
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS-IKKDLNMGRKVHGMSVVTGFDSDGFV 188
G + A+ F ++ G+K NEFTF S+L C+ + G++ HG ++ + DS V
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI 248
++ L+ MYAK G + + ++F +VSWN++ S Y Q ++A+D+FKEM + +
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 249 RPNEFSLSIILNAC--AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
+ + + + AC AGL + ++ +VD+YS+ G++E A
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNS-CMVDLYSRAGQLEKA 651
Query: 307 VAVFEEITHPDIVS-WNAVIAGCVQHE 332
+ V E + +P + W ++A C H+
Sbjct: 652 MKVIENMPNPAGSTIWRTILAACRVHK 678
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 145/314 (46%), Gaps = 1/314 (0%)
Query: 99 RFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVL 158
R A L D+S D S+ +L+ G+ ++G +EA F ++ LG++ + F SVL
Sbjct: 42 RLYNAHNLFDKSPGRDRE-SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 159 KACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVV 218
K + D GR++H + GF D V +LV Y K D RK+F + +VV
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
+W L S Y ++ E + LF M G +PN F+ + L A G
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL 338
+N+L+++Y K G + A +F++ +V+WN++I+G + + AL
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMY 398
+ M+ + + + +S +K CA + QLH ++K D + L+ Y
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 399 SKCEMLSDARRVYE 412
SKC + DA R+++
Sbjct: 341 SKCTAMLDALRLFK 354
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 191/350 (54%), Gaps = 7/350 (2%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
+ HAH+++FG DP RN L+S YS G F +A +L D + + DVV +W+A+I G+V+N
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVV-TWTAMIDGFVRN 182
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTG-FDSDGFV 188
G EA++ F +M GV NE T SVLKA +D+ GR VHG+ + TG D F+
Sbjct: 183 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI 248
++LV MY KC D++K+F + + +VV+W AL + YVQS + + +F+EM++ +
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 249 RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVA 308
PNE +LS +L+ACA + + + L+D+Y K G +E A+
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 309 VFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGF 368
VFE + ++ +W A+I G H A L M SS PN T + L ACA G
Sbjct: 363 VFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGL 422
Query: 369 KDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+ GR+L + ++ +D + ++D++ + +L +A+ + E MP
Sbjct: 423 VEEGRRLFLSMKGRFNMEPKADHYAC--MVDLFGRKGLLEEAKALIERMP 470
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 163/325 (50%), Gaps = 7/325 (2%)
Query: 99 RFGYARKLVDQSTETDVVVSWSALISGYVQNGFG---KEALLAFNDMCMLGVKCNEFTFP 155
+F YAR+L+ Q +T + W +LI G+ G + + LA+ M GV + TFP
Sbjct: 51 QFRYARRLLCQ-LQTLSIQLWDSLI-GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFP 108
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP 215
+LKA +D N + H V G DSD FV N+L+ Y+ G + +LF
Sbjct: 109 PLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDK 167
Query: 216 SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXX 275
VV+W A+ +V++ EA+ F EM + G+ NE ++ +L A + +
Sbjct: 168 DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVH 227
Query: 276 XXXXXXXXXX-DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECN 334
D F ++LVDMY K ++A VF+E+ ++V+W A+IAG VQ C
Sbjct: 228 GLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCF 287
Query: 335 DWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGL 394
D + + EM S PN T+SS L ACA VG GR++H +IK + + L
Sbjct: 288 DKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTL 347
Query: 395 IDMYSKCEMLSDARRVYELMPKKDI 419
ID+Y KC L +A V+E + +K++
Sbjct: 348 IDLYVKCGCLEEAILVFERLHEKNV 372
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 124/247 (50%), Gaps = 7/247 (2%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
LV +Y KC + A+K+ D+ +VV +W+ALI+GYVQ+ + +L F +M V
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVV-TWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
NE T SVL AC+ L+ GR+VH + + + TL+ +Y KCG L ++ +F
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GL-R 266
+ +V +W A+ + + + +A DLF M+ + PNE + +L+ACA GL
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVE 424
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVI 325
G D ++ +VD++ + G +E A A+ E + P V W A+
Sbjct: 425 EGRRLFLSMKGRFNMEPKADHYA--CMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
Query: 326 AGCVQHE 332
C+ H+
Sbjct: 483 GSCLLHK 489
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 4/239 (1%)
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDL--FKE 242
D F++ L Q +R+L + S+ W++L + + ++
Sbjct: 35 DLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRH 94
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
M R G+ P+ + +L A LR+ S D F N+L+ YS G
Sbjct: 95 MRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGL 153
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
+ A +F+ D+V+W A+I G V++ A+ EMK +G N T+ S LKA
Sbjct: 154 FDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA 213
Query: 363 CAAVGFKDLGRQLHSCLIKI-DTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
V GR +H ++ D F+ L+DMY KC DA++V++ MP ++++
Sbjct: 214 AGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVV 272
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 97/186 (52%), Gaps = 6/186 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+ +++LS C +L G +H ++I+ + + L+ LY KCG A + ++
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL 367
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
E + V +W+A+I+G+ +G+ ++A F M V NE TF +VL AC+ + G
Sbjct: 368 HEKN-VYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEG 426
Query: 171 RKVHGMSVVTGFDSDGFVANT--LVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF-SC 226
R++ +S+ F+ + + +V ++ + G L +++ L + + P+ V W ALF SC
Sbjct: 427 RRLF-LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSC 485
Query: 227 YVQSDF 232
+ D+
Sbjct: 486 LLHKDY 491
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 190/364 (52%), Gaps = 1/364 (0%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
Y LL +C K L G +HAH+++ F HD N L+++Y+KCG ARK+ ++
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
+ D V +W+ LISGY Q+ +ALL FN M G NEFT SV+KA + ++ G
Sbjct: 123 QRDFV-TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
++HG V GFDS+ V + L+ +Y + G + D++ +F ++ + + VSWNAL + + +
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
+A++LF+ M+R G RP+ FS + + AC+ F+ N
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
L+DMY+K G I +A +F+ + D+VSWN+++ QH A+ EM+ G P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
N + S L AC+ G D G + + K + + V ++D+ + L+ A R
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 412 ELMP 415
E MP
Sbjct: 422 EEMP 425
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 151/281 (53%)
Query: 140 NDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC 199
ND+ + + + ++LK C++ K L GR VH + + F D + NTL+ MYAKC
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 200 GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
G L ++RK+F + V+W L S Y Q D +A+ F +M+R G PNEF+LS ++
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIV 319
A A R G + +AL+D+Y++ G +++A VF+ + + V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 320 SWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL 379
SWNA+IAG + + AL L M G P+ F+ +S AC++ GF + G+ +H+ +
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 380 IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
IK F L+DMY+K + DAR++++ + K+D++
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 148/313 (47%), Gaps = 5/313 (1%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
++ + ++++ A + G +LH ++ GF + + L+ LY++ G A
Sbjct: 157 YSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA- 215
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
+LV + E+ VSW+ALI+G+ + ++AL F M G + + F++ S+ ACS
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
L G+ VH + +G F NTL+ MYAK G + D+RK+F + VVSWN+L
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
+ Y Q F EAV F+EM R GIRPNE S +L AC+
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH---ECNDWALAL 340
+ + +VD+ + G + A+ EE+ P W A++ C H E +A
Sbjct: 396 PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEH 455
Query: 341 LNEMKSSGACPNV 353
+ E+ P+V
Sbjct: 456 VFELDPDDPGPHV 468
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 195/382 (51%), Gaps = 3/382 (0%)
Query: 42 FQSFTKPPISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGR 99
QS P YT ++L C + L G ++H H I+ GF D + N L+++Y++C R
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 100 FGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLK 159
A L + V+W+++++GY QNGF +A+ F D+ G + N++TFPSVL
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 160 ACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS 219
AC+ +G +VH V +GF ++ +V + L+ MYAKC ++ +R L + VVS
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS 295
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXX-XX 278
WN++ V+ EA+ +F M ++ ++F++ ILN A R
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI 355
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL 338
+ NALVDMY+K G +++A+ VFE + D++SW A++ G + D AL
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEAL 415
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMY 398
L M+ G P+ +S L A A + + G+Q+H IK S V L+ MY
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMY 475
Query: 399 SKCEMLSDARRVYELMPKKDII 420
+KC L DA ++ M +D+I
Sbjct: 476 TKCGSLEDANVIFNSMEIRDLI 497
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 178/336 (52%), Gaps = 5/336 (1%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N ++ YS R A KL +S +SW+ALISGY ++G EA F +M G+
Sbjct: 63 NTMIVAYSNSRRLSDAEKLF-RSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGI 121
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
K NE+T SVL+ C+ L G ++HG ++ TGFD D V N L+ MYA+C ++ ++
Sbjct: 122 KPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEY 181
Query: 208 LFGSIVAP-SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR 266
LF ++ + V+W ++ + Y Q+ F +A++ F+++ R G + N+++ +L ACA +
Sbjct: 182 LFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVS 241
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
+ + +AL+DMY+K +E+A A+ E + D+VSWN++I
Sbjct: 242 ACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIV 301
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDL--GRQLHSCLIKIDT 384
GCV+ AL++ M + FTI S L C A+ ++ H ++K
Sbjct: 302 GCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGY 360
Query: 385 DSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ V L+DMY+K ++ A +V+E M +KD+I
Sbjct: 361 ATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVI 396
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 149/294 (50%), Gaps = 7/294 (2%)
Query: 40 QCFQSFTKP-----PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY 94
+CF+ + ++ ++L+ C + + +G+++H +++ GF + ++ L+ +Y
Sbjct: 213 ECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMY 272
Query: 95 SKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTF 154
+KC AR L+ + E D VVSW+++I G V+ G EAL F M +K ++FT
Sbjct: 273 AKCREMESARALL-EGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTI 331
Query: 155 PSVLKACSIKK-DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV 213
PS+L ++ + ++ + H + V TG+ + V N LV MYAK G + + K+F ++
Sbjct: 332 PSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMI 391
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXX 273
V+SW AL + + EA+ LF M GGI P++ + +L+A A L
Sbjct: 392 EKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQ 451
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAG 327
N+LV MY+K G +E+A +F + D+++W +I G
Sbjct: 452 VHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVG 505
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 121/239 (50%), Gaps = 1/239 (0%)
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
+ D F NT++V Y+ +L D+ KLF S + +SWNAL S Y +S VEA +LF E
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
M GI+PNE++L +L C L D N L+ MY++ R
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 303 IENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALK 361
I A +FE + + V+W +++ G Q+ A+ +++ G N +T S L
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 362 ACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
ACA+V +G Q+H C++K ++ +V LIDMY+KC + AR + E M D++
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVV 294
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 136/316 (43%), Gaps = 49/316 (15%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
FT P I LS+ + + H +++ G++ N LV +Y+K G A
Sbjct: 329 FTIPSILNCFALSRT----EMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
K+ + E DV+ SW+AL++G NG EAL F +M + G+ ++ SVL A +
Sbjct: 385 KVFEGMIEKDVI-SWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAEL 443
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
L G++VHG + +GF S V N+LV MY KCG L D+ +F S+ +++W L
Sbjct: 444 TLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLI 503
Query: 225 SCYVQSDFCVEAVDLFKEM-VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXX 283
Y ++ +A F M GI P AC
Sbjct: 504 VGYAKNGLLEDAQRYFDSMRTVYGITPGPEHY-----AC--------------------- 537
Query: 284 XXDQFSANALVDMYSKGG---RIENAVAVFEEITHPDIVSWNAVIAGCVQH---ECNDWA 337
++D++ + G ++E + E PD W A++A +H E + A
Sbjct: 538 ---------MIDLFGRSGDFVKVEQLLHQME--VEPDATVWKAILAASRKHGNIENGERA 586
Query: 338 LALLNEMKSSGACPNV 353
L E++ + A P V
Sbjct: 587 AKTLMELEPNNAVPYV 602
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 196/372 (52%), Gaps = 6/372 (1%)
Query: 53 TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
+ +LS C L G ++HAH++R+G D S N L+ Y KCGR A KL +
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK 172
+++ SW+ L+SGY QN KEA+ F M G+K + + S+L +C+ L G +
Sbjct: 313 KNII-SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY----V 228
VH ++ +D +V N+L+ MYAKC L D+RK+F A VV +NA+ Y
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
Q + EA+++F++M IRP+ + +L A A L + D F
Sbjct: 432 QWELH-EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIF 490
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
+ +AL+D+YS ++++ VF+E+ D+V WN++ AG VQ N+ AL L E++ S
Sbjct: 491 AGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
P+ FT ++ + A + LG++ H L+K + + ++ L+DMY+KC DA
Sbjct: 551 ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 409 RVYELMPKKDII 420
+ ++ +D++
Sbjct: 611 KAFDSAASRDVV 622
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 191/386 (49%), Gaps = 9/386 (2%)
Query: 40 QCFQSFTK---PPISY--TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY 94
+ F S +K P Y +++L+ C + +L G ++HA+ I+ +D N L+ +Y
Sbjct: 336 ELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMY 395
Query: 95 SKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFG---KEALLAFNDMCMLGVKCNE 151
+KC ARK+ D DVV+ ++A+I GY + G EAL F DM ++ +
Sbjct: 396 AKCDCLTDARKVFDIFAAADVVL-FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 152 FTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGS 211
TF S+L+A + L + +++HG+ G + D F + L+ +Y+ C L DSR +F
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE 514
Query: 212 IVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXX 271
+ +V WN++F+ YVQ EA++LF E+ RP+EF+ + ++ A L +
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH 331
+ + NAL+DMY+K G E+A F+ D+V WN+VI+ H
Sbjct: 575 QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVA 391
AL +L +M S G PN T L AC+ G + G + +++ + +
Sbjct: 635 GEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHY 694
Query: 392 VGLIDMYSKCEMLSDARRVYELMPKK 417
V ++ + + L+ AR + E MP K
Sbjct: 695 VCMVSLLGRAGRLNKARELIEKMPTK 720
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 178/355 (50%), Gaps = 6/355 (1%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
+L + L++ GF D L+ Y K G YAR + D E V+W+ +ISG V+
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS-TVTWTTMISGCVKM 227
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
G +L F + V + + +VL ACSI L G+++H + G + D +
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIR 249
N L+ Y KCG++ + KLF + +++SW L S Y Q+ EA++LF M + G++
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 250 PNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAV 309
P+ ++ S IL +CA L D + N+L+DMY+K + +A V
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 310 FEEITHPDIVSWNAVIAGC----VQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
F+ D+V +NA+I G Q E ++ AL + +M+ P++ T S L+A A+
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHE-ALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 366 VGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ L +Q+H + K + D F LID+YS C L D+R V++ M KD++
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV 521
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 181/353 (51%), Gaps = 4/353 (1%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
+H +I +G D N L++LYS+ G YARK+ ++ E ++V SWS ++S +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLV-SWSTMVSACNHHG 124
Query: 131 FGKEALLAFNDMCMLGVKC-NEFTFPSVLKACS--IKKDLNMGRKVHGMSVVTGFDSDGF 187
+E+L+ F + NE+ S ++ACS + M ++ V +GFD D +
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
V L+ Y K G + +R +F ++ S V+W + S V+ ++ LF +++
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
+ P+ + LS +L+AC+ L D N L+D Y K GR+ A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
+F + + +I+SW +++G Q+ + A+ L M G P+++ SS L +CA++
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 368 FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
G Q+H+ IK + +D +V LIDMY+KC+ L+DAR+V+++ D++
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 163/329 (49%), Gaps = 15/329 (4%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
F+ +++ +LL + SL L ++H + ++G + D + L+ +YS C
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
+R + D+ D+V+ W+++ +GYVQ +EAL F ++ + + +EFTF +++ A
Sbjct: 507 DSRLVFDEMKVKDLVI-WNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAA 565
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWN 221
+ +G++ H + G + + ++ N L+ MYAKCG D+ K F S + VV WN
Sbjct: 566 GNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWN 625
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXXXXXX 279
++ S Y +A+ + ++M+ GI PN + +L+AC AGL
Sbjct: 626 SVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRF 685
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDWA- 337
+ + +V + + GR+ A + E++ T P + W ++++GC + + A
Sbjct: 686 GIEPETEHYV--CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAE 743
Query: 338 ----LALLNEMKSSGACPNVFTISSALKA 362
+A+L++ K SG+ FT+ S + A
Sbjct: 744 HAAEMAILSDPKDSGS----FTMLSNIYA 768
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 215/448 (47%), Gaps = 70/448 (15%)
Query: 42 FQSFTKPPISYTNLLSQCVASK-SLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF 100
SFT + LL C+ SK S +HA +I+ GFS++ +N L+ YSKCG
Sbjct: 13 LSSFTDSS-PFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSL 71
Query: 101 GYARKLVDQSTETDVVV------------------------------SWSALISGYVQNG 130
R++ D+ + ++ +W++++SG+ Q+
Sbjct: 72 EDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHD 131
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVAN 190
+EAL F M G NE++F SVL ACS D+N G +VH + + F SD ++ +
Sbjct: 132 RCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGS 191
Query: 191 TLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
LV MY+KCG + D++++F + +VVSWN+L +C+ Q+ VEA+D+F+ M+ + P
Sbjct: 192 ALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEP 251
Query: 251 NEFSLSIILNACAGLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAV 309
+E +L+ +++ACA L D +NA VDMY+K RI+ A +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 310 FE-------------------------------EITHPDIVSWNAVIAGCVQHECNDWAL 338
F+ ++ ++VSWNA+IAG Q+ N+ AL
Sbjct: 312 FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK------IDTDSDFFVAV 392
+L +K CP ++ ++ LKACA + LG Q H ++K + D FV
Sbjct: 372 SLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGN 431
Query: 393 GLIDMYSKCEMLSDARRVYELMPKKDII 420
LIDMY KC + + V+ M ++D +
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMMERDCV 459
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 195/417 (46%), Gaps = 50/417 (11%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ F S+ ++LS C + G+++H+ + + F D + LV +YSKCG
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND 205
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A+++ D+ + +VV SW++LI+ + QNG EAL F M V+ +E T SV+ AC+
Sbjct: 206 AQRVFDEMGDRNVV-SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 163 IKKDLNMGRKVHGMSVVTG-FDSDGFVANTLVVMYAKCGQLGDSRKLFGS-----IVAPS 216
+ +G++VHG V +D ++N V MYAKC ++ ++R +F S ++A +
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 217 --------------------------VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
VVSWNAL + Y Q+ EA+ LF + R + P
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384
Query: 251 NEFSLSIILNACAGL------RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
+S + IL ACA L D F N+L+DMY K G +E
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 305 NAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACA 364
VF ++ D VSWNA+I G Q+ + AL L EM SG P+ T+ L AC
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 365 AVGFKDLGRQLHSCLIKIDTDSDFFVA------VGLIDMYSKCEMLSDARRVYELMP 415
GF + GR S + + DF VA ++D+ + L +A+ + E MP
Sbjct: 505 HAGFVEEGRHYFSSMTR-----DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 169/358 (47%), Gaps = 47/358 (13%)
Query: 42 FQSFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFG-FSHDPSFRNHLVSLYSKCGR 99
+S +P ++ +++S C + ++ +G E+H +++ +D N V +Y+KC R
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 100 FGYARKLVDQSTETDV------------------------------VVSWSALISGYVQN 129
AR + D +V VVSW+ALI+GY QN
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH------GMSVVTGFD 183
G +EAL F + V ++F ++LKAC+ +L++G + H G +G +
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
D FV N+L+ MY KCG + + +F ++ VSWNA+ + Q+ + EA++LF+EM
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 244 VRGGIRPNEFSLSIILNAC--AG-LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKG 300
+ G +P+ ++ +L+AC AG + G D ++ +VD+ +
Sbjct: 485 LESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYT--CMVDLLGRA 542
Query: 301 GRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHE---CNDWALALLNEMKSSGACPNVF 354
G +E A ++ EE+ PD V W +++A C H + L E++ S + P V
Sbjct: 543 GFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVL 600
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 195/389 (50%), Gaps = 22/389 (5%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
Y ++L C A L LG +LHAH ++ F+ D R + +Y+KC A+ L D S
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
+ S++A+I+GY Q G +ALL F+ + G+ +E + V +AC++ K L+ G
Sbjct: 344 NLNRQ-SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
+++G+++ + D VAN + MY KC L ++ ++F + VSWNA+ + + Q+
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
E + LF M+R I P+EF+ IL AC G G
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGC- 521
Query: 292 ALVDMYSKGGRIENAVAV-------------FEEIT-------HPDIVSWNAVIAGCVQH 331
+L+DMYSK G IE A + EE+ VSWN++I+G V
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVA 391
E ++ A L M G P+ FT ++ L CA + LG+Q+H+ +IK + SD ++
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641
Query: 392 VGLIDMYSKCEMLSDARRVYELMPKKDII 420
L+DMYSKC L D+R ++E ++D +
Sbjct: 642 STLVDMYSKCGDLHDSRLMFEKSLRRDFV 670
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 186/361 (51%), Gaps = 2/361 (0%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++ +L C + +LGM++H ++R G D + L+ +Y+K RF + ++
Sbjct: 182 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 241
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
E + VSWSA+I+G VQN AL F +M + ++ + SVL++C+ +L +G
Sbjct: 242 PEKN-SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
++H ++ + F +DG V + MYAKC + D++ LF + + S+NA+ + Y Q
Sbjct: 301 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE 360
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
+ +A+ LF ++ G+ +E SLS + ACA ++ S D A
Sbjct: 361 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA 420
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
NA +DMY K + A VF+E+ D VSWNA+IA Q+ L L M S
Sbjct: 421 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE 480
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
P+ FT S LKAC G G ++HS ++K S+ V LIDMYSKC M+ +A ++
Sbjct: 481 PDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Query: 411 Y 411
+
Sbjct: 540 H 540
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 194/404 (48%), Gaps = 33/404 (8%)
Query: 50 ISYTN---LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
+S TN + +C +L LG + HAH+I GF N L+ +Y+ F A +
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 107 VDQSTETDVV------------------------------VSWSALISGYVQNGFGKEAL 136
D+ DVV VSW++++SGY+QNG +++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 137 LAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMY 196
F DM G++ + TF +LK CS +D ++G ++HG+ V G D+D A+ L+ MY
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 197 AKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
AK + +S ++F I + VSW+A+ + VQ++ A+ FKEM + ++ +
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 257 IILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP 316
+L +CA L D A +DMY+K +++A +F+ +
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLH 376
+ S+NA+I G Q E AL L + + SSG + ++S +ACA V G Q++
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 377 SCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
IK D VA IDMY KC+ L++A RV++ M ++D +
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV 449
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 163/344 (47%), Gaps = 22/344 (6%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
IS + + C K L+ G++++ I+ S D N + +Y KC A ++ D
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 441
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+ D V SW+A+I+ + QNG G E L F M ++ +EFTF S+LKAC+ L
Sbjct: 442 EMRRRDAV-SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLG 499
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI---------------- 212
G ++H V +G S+ V +L+ MY+KCG + ++ K+
Sbjct: 500 YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKM 559
Query: 213 ----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNG 268
+ VSWN++ S YV + +A LF M+ GI P++F+ + +L+ CA L +
Sbjct: 560 HNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASA 619
Query: 269 SXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGC 328
D + + LVDMYSK G + ++ +FE+ D V+WNA+I G
Sbjct: 620 GLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGY 679
Query: 329 VQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
H + A+ L M PN T S L+ACA +G D G
Sbjct: 680 AHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 723
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 151/316 (47%), Gaps = 25/316 (7%)
Query: 42 FQSFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF 100
+S +P ++ ++L C SL GME+H+ +++ G + + S L+ +YSKCG
Sbjct: 475 LRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 101 GYARKL---------VDQSTE----------TDVVVSWSALISGYVQNGFGKEALLAFND 141
A K+ V + E ++ VSW+++ISGYV ++A + F
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 142 MCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ 201
M +G+ ++FT+ +VL C+ +G+++H + SD ++ +TLV MY+KCG
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 653
Query: 202 LGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA 261
L DSR +F + V+WNA+ Y EA+ LF+ M+ I+PN + IL A
Sbjct: 654 LHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 713
Query: 262 CA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDI 318
CA GL + +N +VD+ K G+++ A+ + E+ D
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSN-MVDILGKSGKVKRALELIREMPFEADD 772
Query: 319 VSWNAVIAGCVQHECN 334
V W ++ C H N
Sbjct: 773 VIWRTLLGVCTIHRNN 788
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 191/353 (54%), Gaps = 3/353 (0%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
++HA L+ G L+ S G +AR++ D + W+A+I GY +N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF-PWNAIIRGYSRN 97
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
++ALL +++M + V + FTFP +LKACS L MGR VH GFD+D FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAP--SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
N L+ +YAKC +LG +R +F + P ++VSW A+ S Y Q+ +EA+++F +M +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
++P+ +L +LNA L++ + +L MY+K G++ A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
+F+++ P+++ WNA+I+G ++ A+ + +EM + P+ +I+SA+ ACA VG
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 368 FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ R ++ + + D D F++ LIDM++KC + AR V++ +D++
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 188/375 (50%), Gaps = 10/375 (2%)
Query: 44 SFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
SFT P +LL C L +G +HA + R GF D +N L++LY+KC R G A
Sbjct: 119 SFTFP-----HLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173
Query: 104 RKLVDQ-STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
R + + +VSW+A++S Y QNG EAL F+ M + VK + SVL A +
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT 233
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
+DL GR +H V G + + + +L MYAKCGQ+ ++ LF + +P+++ WNA
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
+ S Y ++ + EA+D+F EM+ +RP+ S++ ++ACA + +
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLN 342
D F ++AL+DM++K G +E A VF+ D+V W+A+I G H A++L
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 343 EMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI--KIDTDSDFFVAVGLIDMYSK 400
M+ G PN T L AC G G + + KI+ + V ID+ +
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACV--IDLLGR 471
Query: 401 CEMLSDARRVYELMP 415
L A V + MP
Sbjct: 472 AGHLDQAYEVIKCMP 486
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 148/298 (49%), Gaps = 7/298 (2%)
Query: 39 SQCFQSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKC 97
SQ + KP ++ ++L+ + L G +HA +++ G +P L ++Y+KC
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270
Query: 98 GRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSV 157
G+ A+ L D+ ++++ W+A+ISGY +NG+ +EA+ F++M V+ + + S
Sbjct: 271 GQVATAKILFDKMKSPNLIL-WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSA 329
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV 217
+ AC+ L R ++ + + D F+++ L+ M+AKCG + +R +F + V
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXX 275
V W+A+ Y EA+ L++ M RGG+ PN+ + +L AC +G+
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR 449
Query: 276 XXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHE 332
++ ++D+ + G ++ A V + + P + W A+++ C +H
Sbjct: 450 MADHKINPQQQHYA--CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 135/277 (48%), Gaps = 6/277 (2%)
Query: 146 GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS 205
G+ + F + S++ + + K L +++H +V G GF+ L+ + G + +
Sbjct: 17 GIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72
Query: 206 RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL 265
R++F + P + WNA+ Y +++ +A+ ++ M + P+ F+ +L AC+GL
Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPD--IVSWNA 323
+ D F N L+ +Y+K R+ +A VFE + P+ IVSW A
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192
Query: 324 VIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID 383
+++ Q+ AL + ++M+ P+ + S L A + GR +H+ ++K+
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ + + + L MY+KC ++ A+ +++ M ++I
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 207/399 (51%), Gaps = 14/399 (3%)
Query: 14 LSFKPQTIHTTSRTIVDSQ-TNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELH 72
L + Q+IH T +DS T++ +++Q S T+P I + +LL C + +++ G+ +H
Sbjct: 57 LLIEKQSIHRTQLEALDSVITDLETSAQKGISLTEPEI-FASLLETCYSLRAIDHGVRVH 115
Query: 73 AHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV-VVSWSALISGYVQNGF 131
+ + ++ + LV LY+ CG A ++ D+ ++ D +W++LISGY + G
Sbjct: 116 HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQ 175
Query: 132 GKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANT 191
++A+ + M GVK + FTFP VLKAC + +G +H V GF D +V N
Sbjct: 176 YEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNA 235
Query: 192 LVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPN 251
LVVMYAKCG + +R +F I VSWN++ + Y+ EA+D+F+ MV+ GI P+
Sbjct: 236 LVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPD 295
Query: 252 EFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE 311
+ ++S +L ++G ANAL+ +YSK G++ A +F+
Sbjct: 296 KVAISSVLARVLSFKHGRQLHGWVIRRGMEWELS---VANALIVLYSKRGQLGQACFIFD 352
Query: 312 EITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDL 371
++ D VSWNA+I+ H N L +M + A P+ T S L CA G +
Sbjct: 353 QMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVED 409
Query: 372 GRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDA 407
G +L S + K ID + + ++++Y + M+ +A
Sbjct: 410 GERLFSLMSKEYGIDPKMEHYAC--MVNLYGRAGMMEEA 446
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 133/269 (49%), Gaps = 5/269 (1%)
Query: 154 FPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV 213
F S+L+ C + ++ G +VH + ++ +++ LV +YA CG + ++F +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 214 A--PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXX 271
S +WN+L S Y + +A+ L+ +M G++P+ F+ +L AC G+ +
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH 331
D + NALV MY+K G I A VF+ I H D VSWN+++ G + H
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVA 391
AL + M +G P+ ISS L + FK GRQLH +I+ + + VA
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVL--ARVLSFKH-GRQLHGWVIRRGMEWELSVA 331
Query: 392 VGLIDMYSKCEMLSDARRVYELMPKKDII 420
LI +YSK L A +++ M ++D +
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTV 360
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 194/369 (52%), Gaps = 8/369 (2%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
+LS C S S +G+ +H +I+FG + N+L+SLY K ARKL D+ +
Sbjct: 30 ILSFC-ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHR- 87
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
V +W+ +IS + ++ AL F +M G NEFTF SV+++C+ +D++ G +VH
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV 234
G + TGF+ + V ++L +Y+KCGQ ++ +LF S+ +SW + S V +
Sbjct: 148 GSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR 207
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
EA+ + EMV+ G+ PNEF+ +L A + GL G + S
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTS--- 264
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
LVD YS+ ++E+AV V D+ W +V++G V++ A+ EM+S G PN
Sbjct: 265 LVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPN 324
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLS-DARRVY 411
FT S+ L C+AV D G+Q+HS IK+ + V L+DMY KC +A RV+
Sbjct: 325 NFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF 384
Query: 412 ELMPKKDII 420
M +++
Sbjct: 385 GAMVSPNVV 393
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 186/357 (52%), Gaps = 2/357 (0%)
Query: 65 LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALIS 124
L G +H+++I G + + LV YS+ + A ++++ S E DV + W++++S
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFL-WTSVVS 298
Query: 125 GYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
G+V+N KEA+ F +M LG++ N FT+ ++L CS + L+ G+++H ++ GF+
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 185 DGFVANTLVVMYAKCGQLG-DSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
V N LV MY KC ++ ++FG++V+P+VVSW L V F + L EM
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Query: 244 VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI 303
V+ + PN +LS +L AC+ LR+ + N+LVD Y+ ++
Sbjct: 419 VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKV 478
Query: 304 ENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
+ A V + D +++ +++ + ++ AL+++N M G + ++ + A
Sbjct: 479 DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 364 AAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
A +G + G+ LH +K V L+DMYSKC L DA++V+E + D++
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVV 595
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 166/368 (45%), Gaps = 1/368 (0%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y+ +LS C A +SL G ++H+ I+ GF N LV +Y KC V +
Sbjct: 327 TYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGA 386
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ VVSW+ LI G V +GF ++ +M V+ N T VL+ACS + +
Sbjct: 387 MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
++H + D + V N+LV YA ++ + + S+ +++ +L + + +
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNEL 506
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
A+ + M GIR ++ SL ++A A L
Sbjct: 507 GKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVL 566
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
N+LVDMYSK G +E+A VFEEI PD+VSWN +++G + AL+ EM+
Sbjct: 567 NSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKI-DTDSDFFVAVGLIDMYSKCEMLSDARR 409
P+ T L AC+ DLG + + KI + + V L+ + + L +A
Sbjct: 627 PDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATG 686
Query: 410 VYELMPKK 417
V E M K
Sbjct: 687 VVETMHLK 694
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 131/281 (46%), Gaps = 3/281 (1%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ + +L C + + +E+HA+L+R + N LV Y+ + YA ++
Sbjct: 428 VTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRS 487
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
D + ++++L++ + + G + AL N M G++ ++ + P + A + L
Sbjct: 488 MKRRDNI-TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALET 546
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G+ +H SV +GF V N+LV MY+KCG L D++K+F I P VVSWN L S
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLAS 606
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ F A+ F+EM P+ + I+L+AC+ R Q
Sbjct: 607 NGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVE 666
Query: 290 ANA-LVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGC 328
LV + + GR+E A V E + P+ + + ++ C
Sbjct: 667 HYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRAC 707
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 198/371 (53%), Gaps = 1/371 (0%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+++ +LS C + + LG++LH ++ G + S +N L+S+YSKCGRF A KL
Sbjct: 240 VTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRM 299
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ D V +W+ +ISGYVQ+G +E+L F +M GV + TF S+L + S ++L
Sbjct: 300 MSRADTV-TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 358
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
+++H + D F+ + L+ Y KC + ++ +F + VV + A+ S Y+
Sbjct: 359 CKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ ++++++F+ +V+ I PNE +L IL L
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
A++DMY+K GR+ A +FE ++ DIVSWN++I C Q + A+ + +M SG
Sbjct: 479 GCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI 538
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
C + +IS+AL ACA + + G+ +H +IK SD + LIDMY+KC L A
Sbjct: 539 CYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMN 598
Query: 410 VYELMPKKDII 420
V++ M +K+I+
Sbjct: 599 VFKTMKEKNIV 609
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 190/370 (51%), Gaps = 7/370 (1%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I++++LL ++L ++H +++R S D + L+ Y KC A+ + Q
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
DVVV ++A+ISGY+ NG ++L F + + + NE T S+L I L +
Sbjct: 401 CNSVDVVV-FTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
GR++HG + GFD+ + ++ MYAKCG++ + ++F + +VSWN++ + Q
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
SD A+D+F++M GI + S+S L+ACA L + S D +S
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM-KSSG 348
+ L+DMY+K G ++ A+ VF+ + +IVSWN++IA C H +L L +EM + SG
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLS 405
P+ T + +C VG D G + + + I + + V +D++ + L+
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV--VDLFGRAGRLT 697
Query: 406 DARRVYELMP 415
+A + MP
Sbjct: 698 EAYETVKSMP 707
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 184/371 (49%), Gaps = 3/371 (0%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIR-FGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ L+ CVA K+ G++ + + G + + L+ Y + G+ KL D+
Sbjct: 140 TFPCLVKACVALKNFK-GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDR 198
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ D V+ W+ +++GY + G + F+ M M + N TF VL C+ K +++
Sbjct: 199 VLQKDCVI-WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL 257
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G ++HG+ VV+G D +G + N+L+ MY+KCG+ D+ KLF + V+WN + S YVQ
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
S E++ F EM+ G+ P+ + S +L + + N D F
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
+AL+D Y K + A +F + D+V + A+I+G + + +L + +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
PN T+ S L + LGR+LH +IK D+ + +IDMY+KC ++ A
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 410 VYELMPKKDII 420
++E + K+DI+
Sbjct: 498 IFERLSKRDIV 508
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 167/373 (44%), Gaps = 1/373 (0%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P + LL C L G ++HA LI S D ++ +Y+ CG F K+
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 109 Q-STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL 167
+ + W+++IS +V+NG +AL + M GV + TFP ++KAC K+
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154
Query: 168 NMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
+ G D + FVA++L+ Y + G++ KLF ++ V WN + + Y
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
+ + F M I PN + +L+ CA +
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
N+L+ MYSK GR ++A +F ++ D V+WN +I+G VQ + +L EM SS
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
G P+ T SS L + + + +Q+H +++ D F+ LID Y KC +S A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 408 RRVYELMPKKDII 420
+ ++ D++
Sbjct: 395 QNIFSQCNSVDVV 407
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 136/272 (50%), Gaps = 4/272 (1%)
Query: 64 SLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALI 123
+L LG ELH +I+ GF + + ++ +Y+KCGR A ++ ++ ++ D+V SW+++I
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV-SWNSMI 514
Query: 124 SGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD 183
+ Q+ A+ F M + G+ + + + L AC+ + G+ +HG +
Sbjct: 515 TRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLA 574
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
SD + +TL+ MYAKCG L + +F ++ ++VSWN++ + +++ LF EM
Sbjct: 575 SDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634
Query: 244 V-RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA-LVDMYSKGG 301
V + GIRP++ + I+++C + + Q A +VD++ + G
Sbjct: 635 VEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAG 694
Query: 302 RIENAVAVFEEITH-PDIVSWNAVIAGCVQHE 332
R+ A + + PD W ++ C H+
Sbjct: 695 RLTEAYETVKSMPFPPDAGVWGTLLGACRLHK 726
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 193/419 (46%), Gaps = 16/419 (3%)
Query: 9 SYINSLSFKPQTIHTTSRTIVDSQTNVVSNSQC---------FQSFTKPPISYTNLLSQC 59
S++ S++ +P H + ++ TN ++ + F +Y + C
Sbjct: 85 SFLFSVTEEPN--HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIAC 142
Query: 60 VASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSW 119
+ + +G +H+ L + G D + L+ +Y+KCG+ GYARKL D+ TE D V SW
Sbjct: 143 AKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTV-SW 201
Query: 120 SALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVV 179
+++ISGY + G+ K+A+ F M G + +E T S+L ACS DL GR + M++
Sbjct: 202 NSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAIT 261
Query: 180 TGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDL 239
F+ + L+ MY KCG L +R++F ++ V+W A+ + Y Q+ EA L
Sbjct: 262 KKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKL 321
Query: 240 FKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
F EM + G+ P+ +LS +L+AC + + + A LVDMY K
Sbjct: 322 FFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGK 381
Query: 300 GGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSA 359
GR+E A+ VFE + + +WNA+I AL L + M P+ T
Sbjct: 382 CGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGV 438
Query: 360 LKACAAVGFKDLG-RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
L AC G G R H +ID+ S+ ML +A E P K
Sbjct: 439 LSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 191/365 (52%), Gaps = 9/365 (2%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
LL +C++ L ++ A ++ H N L+ + G F Y+ L + E +
Sbjct: 43 LLKKCISVNQLR---QIQAQMLL----HSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPN 95
Query: 115 VVVSWSALISGYVQNGFGKEALLA-FNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
S++ +I G EA L+ + M G+K ++FT+ V AC+ +++ +GR V
Sbjct: 96 HY-SFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFC 233
H G + D + ++L++MYAKCGQ+G +RKLF I VSWN++ S Y ++ +
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYA 214
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
+A+DLF++M G P+E +L +L AC+ L + F + L
Sbjct: 215 KDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKL 274
Query: 294 VDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNV 353
+ MY K G +++A VF ++ D V+W A+I Q+ + A L EM+ +G P+
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDA 334
Query: 354 FTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYEL 413
T+S+ L AC +VG +LG+Q+ + ++ + +VA GL+DMY KC + +A RV+E
Sbjct: 335 GTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEA 394
Query: 414 MPKKD 418
MP K+
Sbjct: 395 MPVKN 399
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 309 VFEEITHPDIVSWNAVIAGCVQHECNDW-----ALALLNEMKSSGACPNVFTISSALKAC 363
+F P+ S+N +I G N W AL+L MK SG P+ FT + AC
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLT----NTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIAC 142
Query: 364 AAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
A + +GR +HS L K+ + D + LI MY+KC + AR++++ + ++D +
Sbjct: 143 AKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTV 199
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 194/387 (50%), Gaps = 7/387 (1%)
Query: 36 VSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYS 95
+ NS P Y +LL C S G++ HAH+++ G D + N L+SLY
Sbjct: 48 ILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYF 107
Query: 96 KCGR-FGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTF 154
K G R++ D D + SW++++SGYV +AL F +M G+ NEFT
Sbjct: 108 KLGPGMRETRRVFDGRFVKDAI-SWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTL 166
Query: 155 PSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA 214
S +KACS ++ +GR HG+ + GF+ + F+++TL +Y + D+R++F +
Sbjct: 167 SSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE 226
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG-GIRPNEFSLSIILNACAGLRNGSXXXX 273
P V+ W A+ S + ++D EA+ LF M RG G+ P+ + +L AC LR
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHEC 333
+ ++L+DMY K G + A VF ++ + VSW+A++ G Q+
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGE 346
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
++ A+ + EM+ +++ + LKACA + LG+++H ++ + V
Sbjct: 347 HEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESA 402
Query: 394 LIDMYSKCEMLSDARRVYELMPKKDII 420
LID+Y K + A RVY M +++I
Sbjct: 403 LIDLYGKSGCIDSASRVYSKMSIRNMI 429
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 173/358 (48%), Gaps = 11/358 (3%)
Query: 59 CVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVS 118
C + LG H +I GF + + L LY AR++ D+ E DV+
Sbjct: 173 CSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVIC- 231
Query: 119 WSALISGYVQNGFGKEALLAFNDMCM-LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMS 177
W+A++S + +N +EAL F M G+ + TF +VL AC + L G+++HG
Sbjct: 232 WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL 291
Query: 178 VVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAV 237
+ G S+ V ++L+ MY KCG + ++R++F + + VSW+AL Y Q+ +A+
Sbjct: 292 ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAI 351
Query: 238 DLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMY 297
++F+EM + + +L ACAGL + +AL+D+Y
Sbjct: 352 EIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLY 407
Query: 298 SKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTIS 357
K G I++A V+ +++ ++++WNA+++ Q+ + A++ N+M G P+ +
Sbjct: 408 GKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFI 467
Query: 358 SALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
+ L AC G D GR + K I ++ + +ID+ + + +A + E
Sbjct: 468 AILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSC--MIDLLGRAGLFEEAENLLE 523
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 11/282 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++ +L+ C + L G E+H LI G + + L+ +Y KCG AR++ +
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
++ + V SWSAL+ GY QNG ++A+ F +M + C F +VLKAC+ + +G
Sbjct: 327 SKKNSV-SWSALLGGYCQNGEHEKAIEIFREMEEKDLYC----FGTVLKACAGLAAVRLG 381
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+++HG V G + V + L+ +Y K G + + +++ + ++++WNA+ S Q+
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQN 441
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXXXXDQ 287
EAV F +MV+ GI+P+ S IL AC + G +
Sbjct: 442 GRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH 501
Query: 288 FSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGC 328
+S ++D+ + G E A + E D W ++ C
Sbjct: 502 YS--CMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPC 541
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 189/369 (51%), Gaps = 6/369 (1%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTET 113
+L+ C A +L G +LHA+ + GF+ + L++LY+KC A +D ET
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA---LDYFLET 450
Query: 114 DV--VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
+V VV W+ ++ Y + + F M + + N++T+PS+LK C DL +G
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
++H + T F + +V + L+ MYAK G+L + + VVSW + + Y Q +
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
F +A+ F++M+ GIR +E L+ ++ACAGL+ D N
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
ALV +YS+ G+IE + FE+ D ++WNA+++G Q N+ AL + M G
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN 690
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
N FT SA+KA + G+Q+H+ + K DS+ V LI MY+KC +SDA + +
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 412 -ELMPKKDI 419
E+ K ++
Sbjct: 751 LEVSTKNEV 759
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 173/336 (51%), Gaps = 19/336 (5%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+ TN +S C ++L G ++HA GFS D F+N LV+LYS+CG+ + +Q
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
TE ++W+AL+SG+ Q+G +EAL F M G+ N FTF S +KA S ++
Sbjct: 652 -TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G++VH + TG+DS+ V N L+ MYAKCG + D+ K F + + VSWNA+ + Y +
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GLRNGSXXXXXXXXXXXXXXXXDQ 287
F EA+D F +M+ +RPN +L +L+AC+ GL + +
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 288 FSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQH---ECNDWALALLNE 343
+VDM ++ G + A +E+ PD + W +++ CV H E ++A L E
Sbjct: 831 HYV-CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Query: 344 MKSSGAC-----PNVFTISSALKACAAVGFKDLGRQ 374
++ + N++ +S A +DL RQ
Sbjct: 890 LEPEDSATYVLLSNLYAVSKKWDA------RDLTRQ 919
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 180/370 (48%), Gaps = 6/370 (1%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y ++L C+ L LG ++H+ +I+ F + + L+ +Y+K G+ A ++ +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
DVV SW+ +I+GY Q F +AL F M G++ +E + + AC+ + L G
Sbjct: 552 AGKDVV-SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+++H + V+GF SD N LV +Y++CG++ +S F A ++WNAL S + QS
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQS 670
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
EA+ +F M R GI N F+ + A + N +
Sbjct: 671 GNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC 730
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
NAL+ MY+K G I +A F E++ + VSWNA+I +H AL ++M S
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVR 790
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
PN T+ L AC+ +G D G + + + +V V +DM ++ +LS A
Sbjct: 791 PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCV--VDMLTRAGLLSRA 848
Query: 408 RRVYELMPKK 417
+ + MP K
Sbjct: 849 KEFIQEMPIK 858
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 179/372 (48%), Gaps = 1/372 (0%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P +++++LS C +SL +G +LH +++ GFS D N LVSLY G A +
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
++ D V+++ LI+G Q G+G++A+ F M + G++ + T S++ ACS L
Sbjct: 348 NMSQRD-AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLF 406
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G+++H + GF S+ + L+ +YAKC + + F +VV WN + Y
Sbjct: 407 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
D + +F++M I PN+++ IL C L + + +
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
+ L+DMY+K G+++ A + D+VSW +IAG Q+ +D AL +M G
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
+ +++A+ ACA + G+Q+H+ SD L+ +YS+C + ++
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 409 RVYELMPKKDII 420
+E D I
Sbjct: 647 LAFEQTEAGDNI 658
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 178/371 (47%), Gaps = 2/371 (0%)
Query: 51 SYTNLLSQCVA-SKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+++ +L C S + + ++HA ++ G N L+ LYS+ G AR++ D
Sbjct: 188 TFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
D SW A+ISG +N EA+ F DM +LG+ + F SVL AC + L +
Sbjct: 248 LRLKDHS-SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G ++HG+ + GF SD +V N LV +Y G L + +F ++ V++N L + Q
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ 366
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ +A++LFK M G+ P+ +L+ ++ AC+ +
Sbjct: 367 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKI 426
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
AL+++Y+K IE A+ F E ++V WN ++ + + + +M+
Sbjct: 427 EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 486
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
PN +T S LK C +G +LG Q+HS +IK + + +V LIDMY+K L A
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWD 546
Query: 410 VYELMPKKDII 420
+ KD++
Sbjct: 547 ILIRFAGKDVV 557
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 2/277 (0%)
Query: 146 GVKCNEFTFPSVLKAC-SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
G++ N T +L+ C L+ GRK+H + G DS+G ++ L Y G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 205 SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG 264
+ K+F + ++ +WN + + E LF MV + PNE + S +L AC G
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 265 LRNGSXXXXXXXXXXXXXXXXDQ-FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNA 323
D N L+D+YS+ G ++ A VF+ + D SW A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 324 VIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID 383
+I+G ++EC A+ L +M G P + SS L AC + ++G QLH ++K+
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
SD +V L+ +Y L A ++ M ++D +
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 187/355 (52%), Gaps = 2/355 (0%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y +L+ C +S+SL G ++H H++ +D NH++S+Y KCG AR++ D
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
E ++V S++++I+GY QNG G EA+ + M + ++F F S++KAC+ D+ +G
Sbjct: 129 PERNLV-SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+++H + S N L+ MY + Q+ D+ ++F I ++SW+++ + + Q
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 231 DFCVEAVDLFKEMVRGGI-RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
F EA+ KEM+ G+ PNE+ L AC+ L + +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
+L DMY++ G + +A VF++I PD SWN +IAG + D A+++ ++M+SSG
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
P+ ++ S L A G Q+HS +IK +D V L+ MY+ C L
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDL 422
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 182/372 (48%), Gaps = 3/372 (0%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++ +++ C +S + LG +LHA +I+ S +N L+++Y + + A ++
Sbjct: 170 AFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGI 229
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV-KCNEFTFPSVLKACSIKKDLNM 169
D++ SWS++I+G+ Q GF EAL +M GV NE+ F S LKACS +
Sbjct: 230 PMKDLI-SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY 288
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G ++HG+ + + + +L MYA+CG L +R++F I P SWN + +
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ + EAV +F +M G P+ SL +L A S D
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV 408
Query: 290 ANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
N+L+ MY+ + +FE+ + D VSWN ++ C+QHE L L M S
Sbjct: 409 CNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE 468
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
P+ T+ + L+ C + LG Q+H +K + F+ GLIDMY+KC L AR
Sbjct: 469 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR 528
Query: 409 RVYELMPKKDII 420
R+++ M +D++
Sbjct: 529 RIFDSMDNRDVV 540
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 170/358 (47%), Gaps = 8/358 (2%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G ++H I+ + + L +Y++CG AR++ DQ D SW+ +I+G
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTA-SWNVIIAGLA 347
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
NG+ EA+ F+ M G + + S+L A + L+ G ++H + GF +D
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT 407
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPS-VVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
V N+L+ MY C L LF + VSWN + + +Q + VE + LFK M+
Sbjct: 408 VCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVS 467
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
P+ ++ +L C + + +QF N L+DMY+K G + A
Sbjct: 468 ECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQA 527
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
+F+ + + D+VSW+ +I G Q + AL L EMKS+G PN T L AC+ V
Sbjct: 528 RRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHV 587
Query: 367 GFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDARR-VYELMPKKDII 420
G + G +L++ + I + V +D+ ++ L++A R + E+ + D++
Sbjct: 588 GLVEEGLKLYATMQTEHGISPTKEHCSCV--VDLLARAGRLNEAERFIDEMKLEPDVV 643
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 4/287 (1%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F IS +LL +L+ GM++H+++I++GF D + N L+++Y+ C
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
L + VSW+ +++ +Q+ E L F M + + + T ++L+ C
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
L +G +VH S+ TG + F+ N L+ MYAKCG LG +R++F S+ VVSW+ L
Sbjct: 487 SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GLRNGSXXXXXXXXXXXXX 282
Y QS F EA+ LFKEM GI PN + +L AC+ GL
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGC 328
+ + +VD+ ++ GR+ A +E+ PD+V W +++ C
Sbjct: 607 SPTKE-HCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 73/135 (54%)
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
D N ++ MY K G + +A VF+ + ++VS+ +VI G Q+ A+ L +M
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 346 SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLS 405
P+ F S +KACA+ LG+QLH+ +IK+++ S LI MY + +S
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMS 220
Query: 406 DARRVYELMPKKDII 420
DA RV+ +P KD+I
Sbjct: 221 DASRVFYGIPMKDLI 235
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 196/369 (53%), Gaps = 4/369 (1%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++T+LLS C AS L +G + H+ +I+ + + N LV +Y+KCG AR++ ++
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ D V +W+ +I YVQ+ EA F M + G+ + S LKAC+ L G
Sbjct: 490 CDRDNV-TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
++VH +SV G D D ++L+ MY+KCG + D+RK+F S+ SVVS NAL + Y Q+
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN 608
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD-QFS 289
+ EAV LF+EM+ G+ P+E + + I+ AC + + + ++
Sbjct: 609 NL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPD-IVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
+L+ MY + A A+F E++ P IV W +++G Q+ + AL EM+ G
Sbjct: 668 GISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG 727
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
P+ T + L+ C+ + GR +HS + + D D + LIDMY+KC + +
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 409 RVYELMPKK 417
+V++ M ++
Sbjct: 788 QVFDEMRRR 796
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 181/359 (50%), Gaps = 4/359 (1%)
Query: 64 SLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALI 123
+L LG+ +HA I+ G + + + LVS+YSKC + A K+ + E + V W+A+I
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF-WNAMI 400
Query: 124 SGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD 183
GY NG + + F DM G ++FTF S+L C+ DL MG + H + +
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
+ FV N LV MYAKCG L D+R++F + V+WN + YVQ + EA DLFK M
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 244 VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI 303
GI + L+ L AC + D + ++L+DMYSK G I
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Query: 304 ENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
++A VF + +VS NA+IAG Q+ + A+ L EM + G P+ T ++ ++AC
Sbjct: 581 KDARKVFSSLPEWSVVSMNALIAGYSQNNLEE-AVVLFQEMLTRGVNPSEITFATIVEAC 639
Query: 364 AAVGFKDLGRQLHSCLIKIDTDSD-FFVAVGLIDMYSKCEMLSDARRVY-ELMPKKDII 420
LG Q H + K S+ ++ + L+ MY +++A ++ EL K I+
Sbjct: 640 HKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIV 698
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 183/368 (49%), Gaps = 8/368 (2%)
Query: 59 CVASKSLTLGMELHAHLIRFGFSHDPSFR-NHL-----VSLYSKCGRFGYARKLVDQSTE 112
C+ S + G+ A L+ F D R +HL ++ Y + G+ AR L + +
Sbjct: 231 CLFSGYVKAGLPEEAVLV-FERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS 289
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK 172
DVV +W+ +ISG+ + G A+ F +M VK T SVL A I +L++G
Sbjct: 290 PDVV-AWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDF 232
VH ++ G S+ +V ++LV MY+KC ++ + K+F ++ + V WNA+ Y +
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
+ ++LF +M G ++F+ + +L+ CA + + F NA
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
LVDMY+K G +E+A +FE + D V+WN +I VQ E A L M G +
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
++S LKAC V G+Q+H +K D D LIDMYSKC ++ DAR+V+
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 413 LMPKKDII 420
+P+ ++
Sbjct: 589 SLPEWSVV 596
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 196/425 (46%), Gaps = 63/425 (14%)
Query: 8 FSYINSLSFKPQ--------------TIHTTSRTIVDSQTNVVSNSQCFQSFTKPPISYT 53
FS++ LS+ P IH I Q + + + F + ++
Sbjct: 17 FSFVRRLSYSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQR-LALA 75
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTET 113
+ + V SKSL LG++ R G N +V LY+KC + YA K D E
Sbjct: 76 LRIGKAVHSKSLILGIDSEG---RLG--------NAIVDLYAKCAQVSYAEKQFD-FLEK 123
Query: 114 DVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
DV +W++++S Y G + L +F + + N+FTF VL C+ + ++ GR++
Sbjct: 124 DVT-AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQI 182
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFC 233
H + G + + + LV MYAKC ++ D+R++F IV P+ V W LFS YV++
Sbjct: 183 HCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLP 242
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
EAV +F+ M G RP+ + ++N
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAFVTVINT-------------------------------- 270
Query: 294 VDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNV 353
Y + G++++A +F E++ PD+V+WN +I+G + C A+ M+ S
Sbjct: 271 ---YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 354 FTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYEL 413
T+ S L A V DLG +H+ IK+ S+ +V L+ MYSKCE + A +V+E
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 414 MPKKD 418
+ +K+
Sbjct: 388 LEEKN 392
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 182/370 (49%), Gaps = 13/370 (3%)
Query: 22 HTTSRTIVDSQTNVVSNSQCFQSFTKPPIS--------YTNLLSQCVASKSLTLGMELHA 73
+ T TI+ S + S+ F F + + + L C L G ++H
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 74 HLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGK 133
++ G D + L+ +YSKCG ARK+ E VV S +ALI+GY QN +
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV-SMNALIAGYSQNNL-E 611
Query: 134 EALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG-FVANTL 192
EA++ F +M GV +E TF ++++AC + L +G + HG GF S+G ++ +L
Sbjct: 612 EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISL 671
Query: 193 VVMYAKCGQLGDSRKLFGSIVAP-SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPN 251
+ MY + ++ LF + +P S+V W + S + Q+ F EA+ +KEM G+ P+
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPD 731
Query: 252 EFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE 311
+ + +L C+ L + D+ ++N L+DMY+K G ++ + VF+
Sbjct: 732 QATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFD 791
Query: 312 EITH-PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD 370
E+ ++VSWN++I G ++ + AL + + M+ S P+ T L AC+ G
Sbjct: 792 EMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVS 851
Query: 371 LGRQLHSCLI 380
GR++ +I
Sbjct: 852 DGRKIFEMMI 861
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 148/312 (47%), Gaps = 13/312 (4%)
Query: 31 SQTNVVSNSQCFQSF-----TKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPS 85
SQ N+ FQ I++ ++ C +SLTLG + H + + GFS +
Sbjct: 606 SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 86 FRN-HLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCM 144
+ L+ +Y A L + + +V W+ ++SG+ QNGF +EAL + +M
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
GV ++ TF +VL+ CS+ L GR +H + D D +NTL+ MYAKCG +
Sbjct: 726 DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 205 SRKLFGSIVAPS-VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
S ++F + S VVSWN+L + Y ++ + +A+ +F M + I P+E + +L AC+
Sbjct: 786 SSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Query: 264 ---GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE-EITHPDIV 319
+ +G D + +VD+ + G ++ A E + PD
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVA--CMVDLLGRWGYLQEADDFIEAQNLKPDAR 903
Query: 320 SWNAVIAGCVQH 331
W++++ C H
Sbjct: 904 LWSSLLGACRIH 915
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/412 (31%), Positives = 202/412 (49%), Gaps = 6/412 (1%)
Query: 7 RFSYINSLSFKPQTIHTTSRTIVDSQTNVVSNSQCFQSFTKPPIS-YTNLLSQCVASKSL 65
S +N++S + I+D + S S KPP S YT LL V ++L
Sbjct: 143 EMSELNAVSRTTMISAYAEQGILDKAVGLFSGM--LASGDKPPSSMYTTLLKSLVNPRAL 200
Query: 66 TLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISG 125
G ++HAH+IR G + S +V++Y KCG A+++ DQ V+ + L+ G
Sbjct: 201 DFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA-VKKPVACTGLMVG 259
Query: 126 YVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSD 185
Y Q G ++AL F D+ GV+ + F F VLKAC+ ++LN+G+++H G +S+
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 186 GFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM-V 244
V LV Y KC + + F I P+ VSW+A+ S Y Q EAV FK +
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 245 RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
+ N F+ + I AC+ L + + Q+ +AL+ MYSK G ++
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 439
Query: 305 NAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACA 364
+A VFE + +PDIV+W A I+G + AL L +M S G PN T + L AC+
Sbjct: 440 DANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS 499
Query: 365 AVGFKDLGRQ-LHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
G + G+ L + L K + +ID+Y++ +L +A + + MP
Sbjct: 500 HAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP 551
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 179/373 (47%), Gaps = 6/373 (1%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPS--FRNHLVSLYSKCGRFGYARKLVD 108
SY L C +SL+ G LH + R G +PS +N ++ +Y +C A KL D
Sbjct: 85 SYQCLFEACRELRSLSHGRLLHDRM-RMGIE-NPSVLLQNCVLQMYCECRSLEDADKLFD 142
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+ +E + V S + +IS Y + G +A+ F+ M G K + ++LK+ + L+
Sbjct: 143 EMSELNAV-SRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALD 201
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
GR++H + G S+ + +V MY KCG L ++++F + V+ L Y
Sbjct: 202 FGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYT 261
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
Q+ +A+ LF ++V G+ + F S++L ACA L + +
Sbjct: 262 QAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS 321
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
LVD Y K E+A F+EI P+ VSW+A+I+G Q + A+ ++S
Sbjct: 322 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 349 ACP-NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
A N FT +S +AC+ + ++G Q+H+ IK + LI MYSKC L DA
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 408 RRVYELMPKKDII 420
V+E M DI+
Sbjct: 442 NEVFESMDNPDIV 454
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 144/286 (50%), Gaps = 8/286 (2%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
++ +L C + + L LG ++HA + + G + S LV Y KC F A + +
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC-NEFTFPSVLKACSIKKDLNMG 170
E + V SWSA+ISGY Q +EA+ F + N FT+ S+ +ACS+ D N+G
Sbjct: 348 EPNDV-SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIG 406
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+VH ++ + + L+ MY+KCG L D+ ++F S+ P +V+W A S +
Sbjct: 407 GQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYY 466
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQ 287
EA+ LF++MV G++PN + +L AC AGL G D
Sbjct: 467 GNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDH 526
Query: 288 FSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHE 332
+ + ++D+Y++ G ++ A+ + + PD +SW ++GC H+
Sbjct: 527 Y--DCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHK 570
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%)
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
EA + +EM + G+ + +S + AC LR+ S N ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 295 DMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVF 354
MY + +E+A +F+E++ + VS +I+ + D A+ L + M +SG P
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 355 TISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELM 414
++ LK+ D GRQ+H+ +I+ S+ + G+++MY KC L A+RV++ M
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 415 PKKDII 420
K +
Sbjct: 246 AVKKPV 251
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 199/378 (52%), Gaps = 12/378 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDP-SFRNHLVSLYSKCGRFGYARKLVDQ 109
++ LL + + LG ++HAH+ +FG+ D + N LV+LY KCG FG K+ D+
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS---IKKD 166
+E + V SW++LIS + AL AF M V+ + FT SV+ ACS + +
Sbjct: 159 ISERNQV-SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
L MG++VH + G + + F+ NTLV MY K G+L S+ L GS +V+WN + S
Sbjct: 218 LMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXX 283
Q++ +EA++ +EMV G+ P+EF++S +L AC+ LR G
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK--ELHAYALKNGSL 334
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNE 343
+ F +ALVDMY ++ + VF+ + I WNA+IAG Q+E + AL L
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 344 M-KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCE 402
M +S+G N T++ + AC G +H ++K D D FV L+DMYS+
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 403 MLSDARRVYELMPKKDII 420
+ A R++ M +D++
Sbjct: 455 KIDIAMRIFGKMEDRDLV 472
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 207/386 (53%), Gaps = 19/386 (4%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+S S + L +G ++HA+ +R G + N LV++Y K G+ ++ L+
Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGS 261
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
D+V +W+ ++S QN EAL +M + GV+ +EFT SVL ACS + L
Sbjct: 262 FGGRDLV-TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 170 GRKVHGMSVVTG-FDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G+++H ++ G D + FV + LV MY C Q+ R++F + + WNA+ + Y
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 229 QSDFCVEAVDLFKEMVR-GGIRPNEFSLSIILNACAGLRNG--SXXXXXXXXXXXXXXXX 285
Q++ EA+ LF M G+ N +++ ++ AC +R+G S
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC--VRSGAFSRKEAIHGFVVKRGLDR 438
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
D+F N L+DMYS+ G+I+ A+ +F ++ D+V+WN +I G V E ++ AL LL++M+
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Query: 346 ------SSGAC-----PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGL 394
S GA PN T+ + L +CAA+ G+++H+ IK + +D V L
Sbjct: 499 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL 558
Query: 395 IDMYSKCEMLSDARRVYELMPKKDII 420
+DMY+KC L +R+V++ +P+K++I
Sbjct: 559 VDMYAKCGCLQMSRKVFDQIPQKNVI 584
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 159/305 (52%), Gaps = 4/305 (1%)
Query: 119 WSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSV 178
W L+ V++ +EA+L + DM +LG+K + + FP++LKA + +D+ +G+++H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 179 VTGFDSDGF-VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAV 237
G+ D VANTLV +Y KCG G K+F I + VSWN+L S + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 238 DLFKEMVRGGIRPNEFSLSIILNACAGL--RNGSXXXXXXXXXXXXXXXXDQFSANALVD 295
+ F+ M+ + P+ F+L ++ AC+ L G + F N LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 296 MYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFT 355
MY K G++ ++ + D+V+WN V++ Q+E AL L EM G P+ FT
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 356 ISSALKACAAVGFKDLGRQLHSCLIKIDT-DSDFFVAVGLIDMYSKCEMLSDARRVYELM 414
ISS L AC+ + G++LH+ +K + D + FV L+DMY C+ + RRV++ M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 415 PKKDI 419
+ I
Sbjct: 365 FDRKI 369
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 182/380 (47%), Gaps = 19/380 (5%)
Query: 53 TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSF-RNHLVSLYSKCGRFGYARKLVDQST 111
+++L C + L G ELHA+ ++ G + SF + LV +Y C + R++ D
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCM-LGVKCNEFTFPSVLKACSIKKDLNMG 170
+ + + W+A+I+GY QN KEALL F M G+ N T V+ AC +
Sbjct: 366 DRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+HG V G D D FV NTL+ MY++ G++ + ++FG + +V+WN + + YV S
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 231 DFCVEAVDLFKEM-----------VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
+ +A+ L +M R ++PN +L IL +CA L +
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALA 339
D +ALVDMY+K G ++ + VF++I ++++WN +I H A+
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 340 LLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLID 396
LL M G PN T S AC+ G D G ++ + ++ SD + V +D
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV--VD 662
Query: 397 MYSKCEMLSDARRVYELMPK 416
+ + + +A ++ +MP+
Sbjct: 663 LLGRAGRIKEAYQLMNMMPR 682
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 199/368 (54%), Gaps = 8/368 (2%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ +++ C L + +H + R F D + N L+++YSKCG + ++ ++
Sbjct: 203 VTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEK 262
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ + V SW+A+IS Y + F ++AL +F++M G++ N T SVL +C + +
Sbjct: 263 IAKKNAV-SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIRE 321
Query: 170 GRKVHGMSVVTGFDSD-GFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G+ VHG +V D + ++ LV +YA+CG+L D + + ++V+WN+L S Y
Sbjct: 322 GKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYA 381
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXXXXXXXXXXXXD 286
++A+ LF++MV I+P+ F+L+ ++AC AGL D
Sbjct: 382 HRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL---VPLGKQIHGHVIRTDVSD 438
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
+F N+L+DMYSK G +++A VF +I H +V+WN+++ G Q+ + A++L + M
Sbjct: 439 EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH 498
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSD 406
S N T + ++AC+++G + G+ +H LI I D F LIDMY+KC L+
Sbjct: 499 SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI-ISGLKDLFTDTALIDMYAKCGDLNA 557
Query: 407 ARRVYELM 414
A V+ M
Sbjct: 558 AETVFRAM 565
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 196/395 (49%), Gaps = 11/395 (2%)
Query: 29 VDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKS-LTLGMELHAHLIRFGFSHDPSFR 87
+D +VS + F P + L C S+ L++G ++H +I+ G D
Sbjct: 85 IDLYHRLVSETTQISKFVFPSV-----LRACAGSREHLSVGGKVHGRIIKGGVDDDAVIE 139
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
L+ +Y + G A K+ D D+V +WS L+S ++NG +AL F M GV
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLV-AWSTLVSSCLENGEVVKALRMFKCMVDDGV 198
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+ + T SV++ C+ L + R VHG FD D + N+L+ MY+KCG L S +
Sbjct: 199 EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GL 265
+F I + VSW A+ S Y + +F +A+ F EM++ GI PN +L +L++C GL
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
+ S ALV++Y++ G++ + V ++ +IV+WN++I
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSL-ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLI 377
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTD 385
+ AL L +M + P+ FT++S++ AC G LG+Q+H +I+ D
Sbjct: 378 SLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV- 436
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
SD FV LIDMYSK + A V+ + + ++
Sbjct: 437 SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVV 471
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 189/392 (48%), Gaps = 15/392 (3%)
Query: 31 SQTNVVSNSQCFQSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRN- 88
S+ + S S+ +S +P ++ ++LS C + G +H +R DP++ +
Sbjct: 284 SEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL--DPNYESL 341
Query: 89 --HLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
LV LY++CG+ ++ ++ ++V +W++LIS Y G +AL F M
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIV-AWNSLISLYAHRGMVIQALGLFRQMVTQR 400
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+K + FT S + AC + +G+++HG + T SD FV N+L+ MY+K G + +
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSAS 459
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR 266
+F I SVV+WN++ + Q+ VEA+ LF M + NE + ++ AC+ +
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSI- 518
Query: 267 NGSXXXXX-XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
GS D F+ AL+DMY+K G + A VF ++ IVSW+++I
Sbjct: 519 -GSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMI 577
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL--IKID 383
H A++ N+M SG PN + L AC G + G+ + + +
Sbjct: 578 NAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVS 637
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+S+ F ID+ S+ L +A R + MP
Sbjct: 638 PNSEHFAC--FIDLLSRSGDLKEAYRTIKEMP 667
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 145/292 (49%), Gaps = 8/292 (2%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV 115
+S C + + LG ++H H+IR S D +N L+ +YSK G A + +Q V
Sbjct: 412 ISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV 470
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
V +W++++ G+ QNG EA+ F+ M ++ NE TF +V++ACS L G+ VH
Sbjct: 471 V-TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHH 529
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVE 235
+++G D F L+ MYAKCG L + +F ++ + S+VSW+++ + Y
Sbjct: 530 KLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGS 588
Query: 236 AVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN--AL 293
A+ F +MV G +PNE +L+AC +GS S +
Sbjct: 589 AISTFNQMVESGTKPNEVVFMNVLSACG--HSGSVEEGKYYFNLMKSFGVSPNSEHFACF 646
Query: 294 VDMYSKGGRIENAVAVFEEITH-PDIVSWNAVIAGCVQHECNDWALALLNEM 344
+D+ S+ G ++ A +E+ D W +++ GC H+ D A+ N++
Sbjct: 647 IDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDL 698
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 154 FPSVLKACSIKKDLNMGRKVHGMSVVTG-FDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
+ + ++CS L + ++H +VTG D L+ YA G SR +F +
Sbjct: 4 YMPLFRSCS---SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNG-SXX 271
P + L C V A+DL+ +V + ++F +L ACAG R S
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH 331
D +L+ MY + G + +A VF+ + D+V+W+ +++ C+++
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVA 391
AL + M G P+ T+ S ++ CA +G + R +H + + D D +
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240
Query: 392 VGLIDMYSKCEMLSDARRVYELMPKKDII 420
L+ MYSKC L + R++E + KK+ +
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAV 269
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 193/376 (51%), Gaps = 9/376 (2%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
Y L S S+ LG H H+I+ + N+L+++Y KC G+AR+L D+
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
E +++ S+++LISGY Q GF ++A+ F + +K ++FT+ L C + DL++G
Sbjct: 110 ERNII-SFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE 168
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
+HG+ VV G F+ N L+ MY+KCG+L + LF VSWN+L S YV+
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVG 228
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACA-GLRNG--SXXXXXXXXXXXXXXXXDQF 288
E ++L +M R G+ ++L +L AC L G D
Sbjct: 229 AAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIV 288
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQ-----HECNDWALALLNE 343
AL+DMY+K G ++ A+ +F + ++V++NA+I+G +Q E + A L +
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD 348
Query: 344 MKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEM 403
M+ G P+ T S LKAC+A + GRQ+H+ + K + SD F+ LI++Y+
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 404 LSDARRVYELMPKKDI 419
D + + K+DI
Sbjct: 409 TEDGMQCFASTSKQDI 424
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 179/377 (47%), Gaps = 9/377 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y L C L LG LH ++ G S N L+ +YSKCG+ A L D+
Sbjct: 150 TYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD---L 167
E D V SW++LISGYV+ G +E L M G+ + SVLKAC I + +
Sbjct: 210 DERDQV-SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFI 268
Query: 168 NMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
G +H + G + D V L+ MYAK G L ++ KLF + + +VV++NA+ S +
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328
Query: 228 VQSDFCV-----EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
+Q D EA LF +M R G+ P+ + S++L AC+ +
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLN 342
D+F +AL+++Y+ G E+ + F + DI SW ++I VQ+E + A L
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 343 EMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCE 402
++ SS P +T+S + ACA G Q+ IK D+ V I MY+K
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 403 MLSDARRVYELMPKKDI 419
+ A +V+ + D+
Sbjct: 509 NMPLANQVFIEVQNPDV 525
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 172/353 (48%), Gaps = 15/353 (4%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
GM +H + + G D R L+ +Y+K G A KL +VV +++A+ISG++
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVV-TYNAMISGFL 329
Query: 128 Q-----NGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGF 182
Q + EA F DM G++ + TF VLKACS K L GR++H + F
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
SD F+ + L+ +YA G D + F S + SW ++ C+VQ++ A DLF++
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA--NALVDMYSKG 300
+ IRP E+++S++++ACA + D F++ + + MY+K
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADF--AALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 301 GRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSAL 360
G + A VF E+ +PD+ +++A+I+ QH + AL + MK+ G PN L
Sbjct: 508 GNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
Query: 361 KACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
AC G G + C+ +I+ + F L+D+ + LSDA +
Sbjct: 568 IACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTC--LVDLLGRTGRLSDAENL 618
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 131/255 (51%), Gaps = 3/255 (1%)
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
+G+ HG + + + ++ N L+ MY KC +LG +R+LF + +++S+N+L S Y
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
Q F +A++LF E ++ ++F+ + L C + F
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
N L+DMYSK G+++ A+++F+ D VSWN++I+G V+ + L LL +M G
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 349 ACPNVFTISSALKACAA---VGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLS 405
+ + S LKAC GF + G +H K+ + D V L+DMY+K L
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304
Query: 406 DARRVYELMPKKDII 420
+A +++ LMP K+++
Sbjct: 305 EAIKLFSLMPSKNVV 319
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 140/286 (48%), Gaps = 11/286 (3%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P +++ +L C A+K+L G ++HA + + F D + L+ LY+ G +
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFA 417
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+++ D + SW+++I +VQN + A F + ++ E+T ++ AC+ L+
Sbjct: 418 STSKQD-IASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALS 476
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G ++ G ++ +G D+ V + + MYAK G + + ++F + P V +++A+ S
Sbjct: 477 SGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLA 536
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFS-LSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
Q EA+++F+ M GI+PN+ + L +++ C G ++
Sbjct: 537 QHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNE 596
Query: 288 FSANALVDMYSKGGRIENAVAV-----FEEITHPDIVSWNAVIAGC 328
LVD+ + GR+ +A + F++ HP V+W A+++ C
Sbjct: 597 KHFTCLVDLLGRTGRLSDAENLILSSGFQD--HP--VTWRALLSSC 638
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 173/369 (46%), Gaps = 34/369 (9%)
Query: 41 CFQSFTKPPISYTN--LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCG 98
C S P SYT +L C SK+ G ++H H+++ G D L+S+Y + G
Sbjct: 124 CMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNG 183
Query: 99 RFGYARKLVDQSTETDVV------------------------------VSWSALISGYVQ 128
R A K+ D+S DVV VSW+A+ISGY +
Sbjct: 184 RLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAE 243
Query: 129 NGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFV 188
G KEAL F DM V+ +E T +V+ AC+ + +GR+VH GF S+ +
Sbjct: 244 TGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKI 303
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI 248
N L+ +Y+KCG+L + LF + V+SWN L Y + EA+ LF+EM+R G
Sbjct: 304 VNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363
Query: 249 RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA--NALVDMYSKGGRIENA 306
PN+ ++ IL ACA L S+ +L+DMY+K G IE A
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
VF I H + SWNA+I G H D + L + M+ G P+ T L AC+
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 483
Query: 367 GFKDLGRQL 375
G DLGR +
Sbjct: 484 GMLDLGRHI 492
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 189/395 (47%), Gaps = 42/395 (10%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF---GYARKLVDQS 110
+LL C +SL + +HA +I+ G + + L+ F YA +
Sbjct: 38 SLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
E ++++ W+ + G+ + AL + M LG+ N +TFP VLK+C+ K G
Sbjct: 95 QEPNLLI-WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS------------------------- 205
+++HG + G D D +V +L+ MY + G+L D+
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 206 ------RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
+KLF I VVSWNA+ S Y ++ EA++LFK+M++ +RP+E ++ ++
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIV 319
+ACA + + NAL+D+YSK G +E A +FE + + D++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 320 SWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL 379
SWN +I G AL L EM SG PN T+ S L ACA +G D+GR +H +
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 380 ---IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
+K T++ + LIDMY+KC + A +V+
Sbjct: 394 DKRLKGVTNAS-SLRTSLIDMYAKCGDIEAAHQVF 427
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 130/299 (43%), Gaps = 37/299 (12%)
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLV---VMYAKCGQLGDSRKLFGSI 212
S+L C K L R +H + G + + + L+ ++ L + +F +I
Sbjct: 38 SLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX 272
P+++ WN +F + S V A+ L+ M+ G+ PN ++ +L +CA +
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 273 XXXXXXXXXXXXXDQFSANALVDMYSKGGR------------------------------ 302
D + +L+ MY + GR
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 303 -IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALK 361
IENA +F+EI D+VSWNA+I+G + AL L +M + P+ T+ + +
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 362 ACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
ACA G +LGRQ+H + S+ + LID+YSKC L A ++E +P KD+I
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 192/364 (52%), Gaps = 5/364 (1%)
Query: 46 TKPPI-SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
KP + ++ +L C L G E+H H++R+G+ D N L+++Y KCG AR
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
L D+ D++ SW+A+ISGY +NG E L F M L V + T SV+ AC +
Sbjct: 252 LLFDRMPRRDII-SWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
D +GR +H + TGF D V N+L MY G ++ KLF + +VSW +
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
S Y + +A+D ++ M + ++P+E +++ +L+ACA L +
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGC-VQHECNDWALALLNE 343
AN L++MYSK I+ A+ +F I +++SW ++IAG + + C + AL L +
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFE-ALIFLRQ 489
Query: 344 MKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEM 403
MK + PN T+++AL ACA +G G+++H+ +++ D F+ L+DMY +C
Sbjct: 490 MKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548
Query: 404 LSDA 407
++ A
Sbjct: 549 MNTA 552
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 168/334 (50%), Gaps = 2/334 (0%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG- 146
N ++++ + G A + + +E ++ SW+ L+ GY + G+ EA+ ++ M +G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLF-SWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
VK + +TFP VL+ C DL G++VH V G++ D V N L+ MY KCG + +R
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR 266
LF + ++SWNA+ S Y ++ C E ++LF M + P+ +L+ +++AC L
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
+ D N+L MY G A +F + DIVSW +I+
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDS 386
G + D A+ M P+ T+++ L ACA +G D G +LH IK S
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 387 DFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
VA LI+MYSKC+ + A ++ +P+K++I
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVI 465
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 146/299 (48%), Gaps = 1/299 (0%)
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGF 182
+ G NG +EA+ N M L V +E F ++++ C K+ G KV+ +++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
+ N + M+ + G L D+ +FG + ++ SWN L Y + + EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 243 MVR-GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG 301
M+ GG++P+ ++ +L C G+ + + D NAL+ MY K G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 302 RIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALK 361
+++A +F+ + DI+SWNA+I+G ++ L L M+ P++ T++S +
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 362 ACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
AC +G + LGR +H+ +I D V L MY +A +++ M +KDI+
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 5/292 (1%)
Query: 43 QSFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
Q KP I+ +LS C L G+ELH I+ N+L+++YSKC
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
A + +V+ SW+++I+G N EAL+ M M ++ N T + L AC
Sbjct: 451 KALDIFHNIPRKNVI-SWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAAC 508
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWN 221
+ L G+++H + TG D F+ N L+ MY +CG++ + F S V SWN
Sbjct: 509 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWN 567
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
L + Y + V+LF MV+ +RP+E + +L C+ +
Sbjct: 568 ILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDY 627
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHE 332
+ +VD+ + G ++ A +++ PD W A++ C H
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 679
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 27/224 (12%)
Query: 22 HTTSRTIVDSQTNVVS----NSQCFQSF--------TKPPISYTNLLSQCVASK--SLTL 67
H R V S T++++ N++CF++ T P + T + ++ +L
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMC 516
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G E+HAH++R G D N L+ +Y +CGR A + + V SW+ L++GY
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKD--VTSWNILLTGYS 574
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
+ G G + F+ M V+ +E TF S+L CS + M R+ G+ + + G
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQ---MVRQ--GLMYFSKMEDYGV 629
Query: 188 VANT-----LVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALFS 225
N +V + + G+L ++ K + V P W AL +
Sbjct: 630 TPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 195/407 (47%), Gaps = 39/407 (9%)
Query: 47 KPPIS-YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF----- 100
KPP S Y NL+ C +++L G ++H H+ GF N L+ +Y+KCG
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 101 ------------------GYA--------RKLVDQSTETDVVVSWSALISGYVQNGFGKE 134
GYA RKL D+ TE D SW+A+++GYV+ +E
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY-SWTAMVTGYVKKDQPEE 200
Query: 135 ALLAFNDMCML-GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLV 193
AL+ ++ M + + N FT + A + K + G+++HG V G DSD + ++L+
Sbjct: 201 ALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLM 260
Query: 194 VMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
MY KCG + ++R +F IV VVSW ++ Y +S E LF E+V RPNE+
Sbjct: 261 DMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEY 320
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
+ + +LNACA L F++++LVDMY+K G IE+A V +
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
PD+VSW ++I GC Q+ D AL + + SG P+ T + L AC G + G
Sbjct: 381 PKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL 440
Query: 374 QLHSCLI---KIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+ + ++ SD + L+D+ ++ + V MP K
Sbjct: 441 EFFYSITEKHRLSHTSDHYTC--LVDLLARSGRFEQLKSVISEMPMK 485
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 133/270 (49%), Gaps = 7/270 (2%)
Query: 63 KSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSAL 122
K + G E+H H++R G D + L+ +Y KCG AR + D+ E DVV SW+++
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV-SWTSM 290
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGF 182
I Y ++ +E F+++ + NE+TF VL AC+ +G++VHG GF
Sbjct: 291 IDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGF 350
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
D F +++LV MY KCG + ++ + P +VSW +L Q+ EA+ F
Sbjct: 351 DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDL 410
Query: 243 MVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
+++ G +P+ + +L+AC AGL G D ++ LVD+ ++
Sbjct: 411 LLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT--CLVDLLAR 468
Query: 300 GGRIENAVAVFEEIT-HPDIVSWNAVIAGC 328
GR E +V E+ P W +V+ GC
Sbjct: 469 SGRFEQLKSVISEMPMKPSKFLWASVLGGC 498
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 142/300 (47%), Gaps = 32/300 (10%)
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
T+ ++++ CS + L G+KVH +GF + N L+ MYAKCG L D+RK+F +
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEM-----------VRGGI------------- 248
+ SWN + + Y + EA LF EM V G +
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 249 --------RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKG 300
RPN F++SI + A A ++ D+ ++L+DMY K
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 301 GRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSAL 360
G I+ A +F++I D+VSW ++I + +L +E+ S PN +T + L
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 361 KACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
ACA + ++LG+Q+H + ++ D F + L+DMY+KC + A+ V + PK D++
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P YT +L+ C + LG ++H ++ R GF + LV +Y+KCG A+ +
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV 376
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS---- 162
VD + D +VSW++LI G QNG EAL F+ + G K + TF +VL AC+
Sbjct: 377 VDGCPKPD-LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGL 435
Query: 163 IKKDLNMGRKV---HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVV 218
++K L + H +S SD + LV + A+ G+ + + + + PS
Sbjct: 436 VEKGLEFFYSITEKHRLS----HTSDHYTC--LVDLLARSGRFEQLKSVISEMPMKPSKF 489
Query: 219 SWNALF---SCYVQSDFCVEAV-DLFK 241
W ++ S Y D EA +LFK
Sbjct: 490 LWASVLGGCSTYGNIDLAEEAAQELFK 516
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 202/374 (54%), Gaps = 9/374 (2%)
Query: 35 VVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY 94
V S+ +C Q +++ +L+ V SL LG ++H ++ G + N L+++Y
Sbjct: 307 VESDVECDQ------VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMY 360
Query: 95 SKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTF 154
K +FG+AR + D +E D++ SW+++I+G QNG EA+ F + G+K +++T
Sbjct: 361 CKLRKFGFARTVFDNMSERDLI-SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 155 PSVLKACS-IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV 213
SVLKA S + + L++ ++VH ++ SD FV+ L+ Y++ + ++ LF
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-H 478
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXX 273
+V+WNA+ + Y QS + + LF M + G R ++F+L+ + C L +
Sbjct: 479 NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ 538
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHEC 333
D + ++ ++DMY K G + A F+ I PD V+W +I+GC+++
Sbjct: 539 VHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGE 598
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
+ A + ++M+ G P+ FTI++ KA + + + GRQ+H+ +K++ +D FV
Sbjct: 599 EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTS 658
Query: 394 LIDMYSKCEMLSDA 407
L+DMY+KC + DA
Sbjct: 659 LVDMYAKCGSIDDA 672
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 170/313 (54%), Gaps = 5/313 (1%)
Query: 108 DQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD- 166
D S+ ++++ L S Y+ +G L F DM V+C++ TF +L A ++K D
Sbjct: 273 DASSVSEIIFRNKGL-SEYLHSGQYSALLKCFADMVESDVECDQVTFILML-ATAVKVDS 330
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
L +G++VH M++ G D V+N+L+ MY K + G +R +F ++ ++SWN++ +
Sbjct: 331 LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG 390
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNG-SXXXXXXXXXXXXXXXX 285
Q+ VEAV LF +++R G++P++++++ +L A + L G S
Sbjct: 391 IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVS 450
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
D F + AL+D YS+ ++ A +FE + D+V+WNA++AG Q L L M
Sbjct: 451 DSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 346 SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLS 405
G + FT+++ K C + + G+Q+H+ IK D D +V+ G++DMY KC +S
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 406 DARRVYELMPKKD 418
A+ ++ +P D
Sbjct: 570 AAQFAFDSIPVPD 582
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 151/306 (49%), Gaps = 2/306 (0%)
Query: 63 KSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSAL 122
+ L+L ++H H I+ D L+ YS+ A L ++ +V+W+A+
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD--LVAWNAM 488
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGF 182
++GY Q+ G + L F M G + ++FT +V K C +N G++VH ++ +G+
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
D D +V++ ++ MY KCG + ++ F SI P V+W + S +++ A +F +
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
M G+ P+EF+++ + A + L D F +LVDMY+K G
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
I++A +F+ I +I +WNA++ G QH L L +MKS G P+ T L A
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 363 CAAVGF 368
C+ G
Sbjct: 729 CSHSGL 734
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 161/371 (43%), Gaps = 38/371 (10%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
L + S L LG HA ++ F + + N+L+S+YSKCG YAR++ D+ + D
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 115 VVVSWSALISGYVQNGFG-----KEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+V SW+++++ Y Q+ ++A L F + V + T +LK C +
Sbjct: 105 LV-SWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
HG + G D D FVA LV +Y K G++ + + LF + VV WN + Y++
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
F EA+DL G+ PNE +L +L +G + + +
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLR-LLARISGDDSDAGQVKSFANGNDASSVSEIIF 282
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
N + Y G+ + F ++ D+ EC+ L+
Sbjct: 283 RNKGLSEYLHSGQYSALLKCFADMVESDV-------------ECDQVTFILM-------- 321
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
+++A+K V LG+Q+H +K+ D V+ LI+MY K AR
Sbjct: 322 ------LATAVK----VDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFART 371
Query: 410 VYELMPKKDII 420
V++ M ++D+I
Sbjct: 372 VFDNMSERDLI 382
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 191/380 (50%), Gaps = 12/380 (3%)
Query: 48 PPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFR-----NHLVSLYSKCGRFGY 102
P ++ +L C ++++ G +LH+ + F PSF LV +Y KCG
Sbjct: 79 PVEAFAYVLELCGKRRAVSQGRQLHSRI----FKTFPSFELDFLAGKLVFMYGKCGSLDD 134
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A K+ D+ + +W+ +I YV NG AL + +M + GV +FP++LKAC+
Sbjct: 135 AEKVFDEMPDR-TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 193
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF-GSIVAPSVVSWN 221
+D+ G ++H + V G+ S GF+ N LV MYAK L +R+LF G V WN
Sbjct: 194 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 253
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
++ S Y S +E ++LF+EM G PN +++ L AC G
Sbjct: 254 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 313
Query: 282 XXXXDQ-FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALAL 340
+ + NAL+ MY++ G++ A + ++ + D+V+WN++I G VQ+ AL
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373
Query: 341 LNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSK 400
++M ++G + +++S + A + G +LH+ +IK DS+ V LIDMYSK
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Query: 401 CEMLSDARRVYELMPKKDII 420
C + R + M KD+I
Sbjct: 434 CNLTCYMGRAFLRMHDKDLI 453
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 193/381 (50%), Gaps = 8/381 (2%)
Query: 45 FTKP-PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFR--NHLVSLYSKCGR 99
T P P SYT + L+ C LG E+HA +++ +H N L+++Y++CG+
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS-THSSELYVCNALIAMYTRCGK 335
Query: 100 FGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLK 159
A +++ Q DVV +W++LI GYVQN KEAL F+DM G K +E + S++
Sbjct: 336 MPQAERILRQMNNADVV-TWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394
Query: 160 ACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS 219
A +L G ++H + G+DS+ V NTL+ MY+KC + F + ++S
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS 454
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
W + + Y Q+D VEA++LF+++ + + +E L IL A + L++
Sbjct: 455 WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKS-MLIVKEIHCHI 513
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALA 339
D N LVD+Y K + A VFE I D+VSW ++I+ + A+
Sbjct: 514 LRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVE 573
Query: 340 LLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYS 399
L M +G + + L A A++ + GR++H L++ + +AV ++DMY+
Sbjct: 574 LFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYA 633
Query: 400 KCEMLSDARRVYELMPKKDII 420
C L A+ V++ + +K ++
Sbjct: 634 CCGDLQSAKAVFDRIERKGLL 654
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 165/324 (50%), Gaps = 2/324 (0%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+S T++++ +L GMELHA++I+ G+ + N L+ +YSKC Y + +
Sbjct: 387 VSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLR 446
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ D++ SW+ +I+GY QN EAL F D+ ++ +E S+L+A S+ K + +
Sbjct: 447 MHDKDLI-SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
+++H + G D + N LV +Y KC +G + ++F SI VVSW ++ S
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 564
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ EAV+LF+ MV G+ + +L IL+A A L + +
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
A A+VDMY+ G +++A AVF+ I ++ + ++I H C A+ L ++M+
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Query: 350 CPNVFTISSALKACAAVGFKDLGR 373
P+ + + L AC+ G D GR
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGR 708
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 14/276 (5%)
Query: 63 KSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSAL 122
KS+ + E+H H++R G D +N LV +Y KC GYA ++ + DVV SW+++
Sbjct: 501 KSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVV-SWTSM 558
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGF 182
IS NG EA+ F M G+ + +L A + LN GR++H + GF
Sbjct: 559 ISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGF 618
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
+G +A +V MYA CG L ++ +F I ++ + ++ + Y AV+LF +
Sbjct: 619 CLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDK 678
Query: 243 MVRGGIRPNEFSLSIILNAC--AGLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
M + P+ S +L AC AGL + G + + LVDM
Sbjct: 679 MRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV--CLVDML-- 734
Query: 300 GGRIENAVAVFEEI----THPDIVSWNAVIAGCVQH 331
GR V FE + T P W A++A C H
Sbjct: 735 -GRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSH 769
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 190/381 (49%), Gaps = 3/381 (0%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFG--FSHDPSFRNHLVSLYSKCGR 99
F++ P Y +L CV + L+ G ++HA +++ G ++ + LV Y+KC
Sbjct: 63 FRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDA 122
Query: 100 FGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLK 159
A L + V SW+A+I + G + AL+ F +M + + F P+V K
Sbjct: 123 LEIAEVLFSK-LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCK 181
Query: 160 ACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS 219
AC K GR VHG V +G + FVA++L MY KCG L D+ K+F I + V+
Sbjct: 182 ACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVA 241
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
WNAL YVQ+ EA+ LF +M + G+ P ++S L+A A +
Sbjct: 242 WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI 301
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALA 339
D +L++ Y K G IE A VF+ + D+V+WN +I+G VQ + A+
Sbjct: 302 VNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIY 361
Query: 340 LLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYS 399
+ M+ + T+++ + A A LG+++ I+ +SD +A ++DMY+
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 400 KCEMLSDARRVYELMPKKDII 420
KC + DA++V++ +KD+I
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLI 442
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 177/345 (51%), Gaps = 33/345 (9%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G + HA I G D L++ Y K G YA + D+ E DVV +W+ +ISGYV
Sbjct: 293 GKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV-TWNLIISGYV 351
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
Q G ++A+ M + +K + T +++ A + ++L +G++V + F+SD
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
+A+T++ MYAKCG + D++K+F S V ++ WN L + Y +S EA+ LF M G
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
+ PN + ++I+ + LRNG + + + M S G
Sbjct: 472 VPPNVITWNLIILSL--LRNGQVDE----------------AKDMFLQMQSSG------- 506
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
P+++SW ++ G VQ+ C++ A+ L +M+ SG PN F+I+ AL ACA +
Sbjct: 507 ------IIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLA 560
Query: 368 FKDLGRQLHSCLIK-IDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
+GR +H +I+ + S + L+DMY+KC ++ A +V+
Sbjct: 561 SLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF 605
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 161/347 (46%), Gaps = 20/347 (5%)
Query: 76 IRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEA 135
+ F S PS ++H D+ + S+ +S +NG KEA
Sbjct: 13 VPFSVSSKPSSKHH------------------DEQAHSPSSTSYFHRVSSLCKNGEIKEA 54
Query: 136 LLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTG--FDSDGFVANTLV 193
L +M ++ + +L+ C ++DL+ G+++H + G + + ++ LV
Sbjct: 55 LSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLV 114
Query: 194 VMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
+ YAKC L + LF + +V SW A+ + C A+ F EM+ I P+ F
Sbjct: 115 IFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNF 174
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
+ + AC L+ F A++L DMY K G +++A VF+EI
Sbjct: 175 VVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI 234
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
+ V+WNA++ G VQ+ N+ A+ L ++M+ G P T+S+ L A A +G + G+
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 374 QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
Q H+ I + D + L++ Y K ++ A V++ M +KD++
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 155/328 (47%), Gaps = 5/328 (1%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTET 113
N+ C A K G +H ++++ G + L +Y KCG A K+ D+ +
Sbjct: 178 NVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR 237
Query: 114 DVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
+ V +W+AL+ GYVQNG +EA+ F+DM GV+ T + L A + + G++
Sbjct: 238 NAV-AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFC 233
H +++V G + D + +L+ Y K G + + +F + VV+WN + S YVQ
Sbjct: 297 HAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLV 356
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
+A+ + + M ++ + +L+ +++A A N D A+ +
Sbjct: 357 EDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTV 416
Query: 294 VDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNV 353
+DMY+K G I +A VF+ D++ WN ++A + + AL L M+ G PNV
Sbjct: 417 MDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNV 476
Query: 354 FT----ISSALKACAAVGFKDLGRQLHS 377
T I S L+ KD+ Q+ S
Sbjct: 477 ITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 167/374 (44%), Gaps = 42/374 (11%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ L+S +++L LG E+ + IR F D + ++ +Y+KCG A+K+ D
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ E D+++ W+ L++ Y ++G EAL F M + GV N T+
Sbjct: 436 TVEKDLIL-WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW--------------- 479
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF----GSIVAPSVVSWNALFS 225
N +++ + GQ+ +++ +F S + P+++SW + +
Sbjct: 480 --------------------NLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX 285
VQ+ EA+ ++M G+RPN FS+++ L+ACA L +
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHS 579
Query: 286 DQFS-ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
S +LVDMY+K G I A VF + ++ NA+I+ + A+AL +
Sbjct: 580 SLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGL-IDMYSKCEM 403
+ G P+ TI++ L AC G + ++ + ++ + GL +D+ +
Sbjct: 640 EGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGE 699
Query: 404 LSDARRVYELMPKK 417
A R+ E MP K
Sbjct: 700 TEKALRLIEEMPFK 713
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 10/239 (4%)
Query: 98 GRFGYARKLVDQSTETDVV---VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTF 154
G+ A+ + Q + ++ +SW+ +++G VQNG +EA+L M G++ N F+
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 155 PSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA--NTLVVMYAKCGQLGDSRKLFGSI 212
L AC+ L++GR +HG ++ V+ +LV MYAKCG + + K+FGS
Sbjct: 550 TVALSACAHLASLHIGRTIHGY-IIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSK 608
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSX 270
+ + NA+ S Y EA+ L++ + G++P+ +++ +L+AC AG N +
Sbjct: 609 LYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAI 668
Query: 271 XXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGC 328
+ +VD+ + G E A+ + EE+ PD +++A C
Sbjct: 669 EIFTDIVSKRSMKPCLEHYG-LMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASC 726
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 188/379 (49%), Gaps = 11/379 (2%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
FT P + L C + S LG++LH+ +++ GF+HD + L+S+YS GR
Sbjct: 109 LHGFTFPLV-----LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLN 163
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
A KL D+ + VV+W+AL SGY +G +EA+ F M +GVK + + VL AC
Sbjct: 164 DAHKLFDEIPDRS-VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWN 221
DL+ G + + FV TLV +YAKCG++ +R +F S+V +V+W+
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWS 282
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
+ Y + F E ++LF +M++ ++P++FS+ L++CA L
Sbjct: 283 TMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH 342
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALL 341
+ F ANAL+DMY+K G + VF+E+ DIV NA I+G ++ + A+
Sbjct: 343 EFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVF 402
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLH---SCLIKIDTDSDFFVAVGLIDMY 398
+ + G P+ T L C G G + SC+ + + + ++D++
Sbjct: 403 GQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGC--MVDLW 460
Query: 399 SKCEMLSDARRVYELMPKK 417
+ ML DA R+ MP +
Sbjct: 461 GRAGMLDDAYRLICDMPMR 479
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 185/353 (52%), Gaps = 5/353 (1%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLV--SLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
++H LI HD N L+ +L+ + ++ Y L+ T+ + +++LI+G+V
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSY---LLFSHTQFPNIFLYNSLINGFV 87
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
N E L F + G+ + FTFP VLKAC+ +G +H + V GF+ D
Sbjct: 88 NNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVA 147
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
+L+ +Y+ G+L D+ KLF I SVV+W ALFS Y S EA+DLFK+MV G
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG 207
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
++P+ + + +L+AC + + + F LV++Y+K G++E A
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
+VF+ + DIV+W+ +I G + + L +M P+ F+I L +CA++G
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 368 FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
DLG S + + + ++ F+A LIDMY+KC ++ V++ M +KDI+
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 144/304 (47%), Gaps = 13/304 (4%)
Query: 49 PISY--TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P SY +LS CV L G + ++ + R LV+LY+KCG+ AR +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
D E D+V +WS +I GY N F KE + F M +K ++F+ L +C+
Sbjct: 270 FDSMVEKDIV-TWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 167 LNMGRKVHGMSVVT--GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
L++G G+S++ F ++ F+AN L+ MYAKCG + ++F + +V NA
Sbjct: 329 LDLGE--WGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXX 281
S ++ + +F + + GI P+ + +L C AGL ++G
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYAL 446
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDWALAL 340
+ + +VD++ + G +++A + ++ P+ + W A+++GC + A +
Sbjct: 447 KRTVEHYGC--MVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 341 LNEM 344
L E+
Sbjct: 505 LKEL 508
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 121/261 (46%), Gaps = 4/261 (1%)
Query: 160 ACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS 219
AC++ N +++H + D F+ N L+ Q S LF P++
Sbjct: 23 ACTV----NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFL 78
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
+N+L + +V + E +DLF + + G+ + F+ ++L AC +
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALA 339
D + +L+ +YS GR+ +A +F+EI +V+W A+ +G + A+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 340 LLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYS 399
L +M G P+ + I L AC VG D G + + +++ + FV L+++Y+
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 400 KCEMLSDARRVYELMPKKDII 420
KC + AR V++ M +KDI+
Sbjct: 259 KCGKMEKARSVFDSMVEKDIV 279
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 194/384 (50%), Gaps = 13/384 (3%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRN----HLVSLYSKCG 98
F I ++ L C + L G ++H L++ PSF N L+ +Y+KCG
Sbjct: 136 HGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKV-----PSFDNVVLTGLLDMYAKCG 190
Query: 99 RFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVL 158
A K+ + T +VV W+++I+GYV+N +E L+ FN M V NE+T+ +++
Sbjct: 191 EIKSAHKVFNDITLRNVVC-WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249
Query: 159 KACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVV 218
AC+ L+ G+ HG V +G + + +L+ MY KCG + ++R++F +V
Sbjct: 250 MACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLV 309
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
W A+ Y + EA+ LF++M I+PN +++ +L+ C GL
Sbjct: 310 MWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC-GLIENLELGRSVHGL 368
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL 338
D ANALV MY+K + +A VFE + DIV+WN++I+G Q+ AL
Sbjct: 369 SIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEAL 428
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID--TDSDFFVAVGLID 396
L + M S PN T++S ACA++G +G LH+ +K+ S V L+D
Sbjct: 429 FLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLD 488
Query: 397 MYSKCEMLSDARRVYELMPKKDII 420
Y+KC AR +++ + +K+ I
Sbjct: 489 FYAKCGDPQSARLIFDTIEEKNTI 512
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 181/370 (48%), Gaps = 14/370 (3%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY---ARKLVDQST 111
LLS+C SL + H L G D S LVSLY G FGY AR + DQ
Sbjct: 50 LLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLY---GFFGYTKDARLVFDQIP 103
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
E D + W ++ Y N E + ++ + G + ++ F LKAC+ +DL+ G+
Sbjct: 104 EPDFYL-WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGK 162
Query: 172 KVHGMSV-VTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
K+H V V FD+ V L+ MYAKCG++ + K+F I +VV W ++ + YV++
Sbjct: 163 KIHCQLVKVPSFDN--VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
D C E + LF M + NE++ ++ AC L
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
+L+DMY K G I NA VF E +H D+V W A+I G + + AL+L +MK
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
PN TI+S L C + +LGR +H IK+ D VA L+ MY+KC DA+ V
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYV 399
Query: 411 YELMPKKDII 420
+E+ +KDI+
Sbjct: 400 FEMESEKDIV 409
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 179/372 (48%), Gaps = 13/372 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y L+ C +L G H L++ G L+ +Y KCG AR++ ++
Sbjct: 244 TYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH 303
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ D+V+ W+A+I GY NG EAL F M + +K N T SVL C + ++L +G
Sbjct: 304 SHVDLVM-WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELG 362
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
R VHG+S+ G D VAN LV MYAKC Q D++ +F +V+WN++ S + Q+
Sbjct: 363 RSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQN 421
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRN---GSXXXXXXXXXXXXXXXXDQ 287
EA+ LF M + PN +++ + +ACA L + GS
Sbjct: 422 GSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVH 481
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
AL+D Y+K G ++A +F+ I + ++W+A+I G + +L L EM
Sbjct: 482 V-GTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG----LIDMYSKCEM 403
PN T +S L AC G + G++ S + K D +F + ++DM ++
Sbjct: 541 QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYK---DYNFTPSTKHYTCMVDMLARAGE 597
Query: 404 LSDARRVYELMP 415
L A + E MP
Sbjct: 598 LEQALDIIEKMP 609
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 155/305 (50%), Gaps = 11/305 (3%)
Query: 47 KPP-ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
KP ++ ++LS C ++L LG +H I+ G D + N LV +Y+KC + A+
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKY 398
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
+ + +E D+V +W+++ISG+ QNG EAL F+ M V N T S+ AC+
Sbjct: 399 VFEMESEKDIV-AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 166 DLNMGRKVHGMSVVTGF--DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNAL 223
L +G +H SV GF S V L+ YAKCG +R +F +I + ++W+A+
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517
Query: 224 FSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GLRN-GSXXXXXXXXXXX 280
Y + + +++LF+EM++ +PNE + + IL+AC G+ N G
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDWALA 339
++ +VDM ++ G +E A+ + E++ PD+ + A + GC H D
Sbjct: 578 FTPSTKHYT--CMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEI 635
Query: 340 LLNEM 344
++ +M
Sbjct: 636 VIKKM 640
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFR--NHLVSLYSKCGRF 100
+S T ++ +L S C + SL +G LHA+ ++ GF S L+ Y+KCG
Sbjct: 437 ESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDP 496
Query: 101 GYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA 160
AR + D E + ++WSA+I GY + G +L F +M K NE TF S+L A
Sbjct: 497 QSARLIFDTIEEKN-TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Query: 161 CSIKKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVV 218
C +N G+K M F +V M A+ G+L + + + + P V
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 615
Query: 219 SWNA-LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
+ A L C + S F + + + K+M+ + P++ S ++++
Sbjct: 616 CFGAFLHGCGMHSRFDLGEI-VIKKMLD--LHPDDASYYVLVS 655
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 184/364 (50%), Gaps = 6/364 (1%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
+T +LS A+ + LG ++H I+ G + N LV++YSKC A K+ D S
Sbjct: 224 FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSG 283
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
+ + + +WSA+++GY QNG EA+ F+ M G+K +E+T VL ACS L G+
Sbjct: 284 DRNSI-TWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK 342
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
++H + GF+ F LV MYAK G L D+RK F + V W +L S YVQ+
Sbjct: 343 QLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNS 402
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
EA+ L++ M GI PN+ +++ +L AC+ L + +
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGS 462
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
AL MYSK G +E+ VF + D+VSWNA+I+G + D AL L EM + G P
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEP 522
Query: 352 NVFTISSALKACAAVGFKDLGR---QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
+ T + + AC+ GF + G + S I +D D + ++D+ S+ L +A+
Sbjct: 523 DDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYAC--MVDLLSRAGQLKEAK 580
Query: 409 RVYE 412
E
Sbjct: 581 EFIE 584
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 188/362 (51%), Gaps = 7/362 (1%)
Query: 63 KSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSAL 122
+S T+G + HA +++ D LV +Y K G K+ E + +WS +
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY-TWSTM 190
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVKCNE--FTFPSVLKACSIKKDLNMGRKVHGMSVVT 180
+SGY G +EA+ FN + ++ + F +VL + + + +GR++H +++
Sbjct: 191 VSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKN 250
Query: 181 GFDSDGFVA--NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVD 238
G GFVA N LV MY+KC L ++ K+F S + ++W+A+ + Y Q+ +EAV
Sbjct: 251 GLL--GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 239 LFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYS 298
LF M GI+P+E+++ +LNAC+ + F+ ALVDMY+
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 368
Query: 299 KGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISS 358
K G + +A F+ + D+ W ++I+G VQ+ N+ AL L MK++G PN T++S
Sbjct: 369 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 428
Query: 359 ALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
LKAC+++ +LG+Q+H IK + + L MYSKC L D V+ P KD
Sbjct: 429 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 419 II 420
++
Sbjct: 489 VV 490
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 183/384 (47%), Gaps = 7/384 (1%)
Query: 42 FQSFTKPPIS-YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF 100
FQ+ P S L+ ++L G +H +IR G S N LV+ Y+KCG+
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 101 GYARKLVDQSTETDVVVSWSALISGYVQNG---FGKEALLAFNDMCMLGVKCNEFTFPSV 157
A + + DVV SW++LI+GY QNG + F +M + N +T +
Sbjct: 66 AKAHSIFNAIICKDVV-SWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGI 124
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV 217
KA S + +GR+ H + V D +V +LV MY K G + D K+F + +
Sbjct: 125 FKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIR--PNEFSLSIILNACAGLRNGSXXXXXX 275
+W+ + S Y EA+ +F +R +++ + +L++ A
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIH 244
Query: 276 XXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECND 335
+NALV MYSK + A +F+ + ++W+A++ G Q+ +
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESL 304
Query: 336 WALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLI 395
A+ L + M S+G P+ +TI L AC+ + + + G+QLHS L+K+ + F L+
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALV 364
Query: 396 DMYSKCEMLSDARRVYELMPKKDI 419
DMY+K L+DAR+ ++ + ++D+
Sbjct: 365 DMYAKAGCLADARKGFDCLQERDV 388
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 12/300 (4%)
Query: 39 SQCFQSFTKPPISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSK 96
S+ F + KP YT +L+ C L G +LH+ L++ GF LV +Y+K
Sbjct: 311 SRMFSAGIKPS-EYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369
Query: 97 CGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPS 156
G ARK D E DV + W++LISGYVQN +EAL+ + M G+ N+ T S
Sbjct: 370 AGCLADARKGFDCLQERDVAL-WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 428
Query: 157 VLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPS 216
VLKACS L +G++VHG ++ GF + + + L MY+KCG L D +F
Sbjct: 429 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 217 VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXX 273
VVSWNA+ S + EA++LF+EM+ G+ P++ + I++AC+ + G
Sbjct: 489 VVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFN 548
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE--EITHPDIVSWNAVIAGCVQH 331
D ++ +VD+ S+ G+++ A E I H + W +++ C H
Sbjct: 549 MMSDQIGLDPKVDHYA--CMVDLLSRAGQLKEAKEFIESANIDH-GLCLWRILLSACKNH 605
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 190/357 (53%), Gaps = 5/357 (1%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G ++H +L++ G + N+L+ +Y KC A K+ D E +VV SWSAL+SG+V
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVV-SWSALMSGHV 83
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
NG K +L F++M G+ NEFTF + LKAC + L G ++HG + GF+
Sbjct: 84 LNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
V N+LV MY+KCG++ ++ K+F IV S++SWNA+ + +V + + +A+D F M
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 248 I--RPNEFSLSIILNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI 303
I RP+EF+L+ +L AC+ G+ +LVD+Y K G +
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL 263
Query: 304 ENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
+A F++I ++SW+++I G Q A+ L ++ + + F +SS +
Sbjct: 264 FSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 323
Query: 364 AAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
A G+Q+ + +K+ + + V ++DMY KC ++ +A + + M KD+I
Sbjct: 324 ADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVI 380
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 188/389 (48%), Gaps = 24/389 (6%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
Q +++ L C +L G+++H ++ GF N LV +YSKCGR
Sbjct: 101 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 160
Query: 103 A----RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVK--CNEFTFPS 156
A R++VD+S ++SW+A+I+G+V G+G +AL F M +K +EFT S
Sbjct: 161 AEKVFRRIVDRS-----LISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 157 VLKACSIKKDLNMGRKVHGMSVVTGFD--SDGFVANTLVVMYAKCGQLGDSRKLFGSIVA 214
+LKACS + G+++HG V +GF S + +LV +Y KCG L +RK F I
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 275
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXX 271
+++SW++L Y Q VEA+ LFK + + + F+LS I+ A LR G
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 335
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH 331
+ N++VDMY K G ++ A F E+ D++SW VI G +H
Sbjct: 336 QALAVKLPSGL---ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 392
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDF 388
++ + EM P+ + L AC+ G G +L S L++ I +
Sbjct: 393 GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH 452
Query: 389 FVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+ V +D+ + L +A+ + + MP K
Sbjct: 453 YACV--VDLLGRAGRLKEAKHLIDTMPIK 479
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 11/288 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPS---FRNHLVSLYSKCGRFGYARKLV 107
+ T+LL C ++ + G ++H L+R GF H PS LV LY KCG ARK
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGF-HCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 108 DQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL 167
DQ E ++SWS+LI GY Q G EA+ F + L + + F S++ + L
Sbjct: 271 DQIKEK-TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALL 329
Query: 168 NMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
G+++ ++V + V N++V MY KCG + ++ K F + V+SW + + Y
Sbjct: 330 RQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGY 389
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXXX 284
+ ++V +F EM+R I P+E +L+AC+ ++ G
Sbjct: 390 GKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPR 449
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQH 331
+ ++ +VD+ + GR++ A + + + P++ W +++ C H
Sbjct: 450 VEHYA--CVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVH 495
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 200/374 (53%), Gaps = 9/374 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+++ LL QC+ +S++ + AH+++ GF + S + LV KCG YAR++ D
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGM 125
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM- 169
+E +V +W++LI+ +++ KEA+ + M V +E+T SV KA S DL++
Sbjct: 126 SERHIV-TWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFS---DLSLE 181
Query: 170 --GRKVHGMSVVTGFD-SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
++ HG++V+ G + S+ FV + LV MY K G+ +++ + + VV AL
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
Y Q EAV F+ M+ ++PNE++ + +L +C L++
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
S +L+ MY + +++++ VF+ I +P+ VSW ++I+G VQ+ + AL +M
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSD 406
PN FT+SSAL+ C+ + + GRQ+H + K D D + GLID+Y KC
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 407 ARRVYELMPKKDII 420
AR V++ + + D+I
Sbjct: 422 ARLVFDTLSEVDVI 435
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 147/274 (53%), Gaps = 1/274 (0%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
LV +Y K G+ A+ ++D+ E DVV+ +ALI GY Q G EA+ AF M + V+
Sbjct: 207 LVDMYVKFGKTREAKLVLDRVEEKDVVL-ITALIVGYSQKGEDTEAVKAFQSMLVEKVQP 265
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
NE+T+ SVL +C KD+ G+ +HG+ V +GF+S +L+ MY +C + DS ++F
Sbjct: 266 NEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF 325
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGS 269
I P+ VSW +L S VQ+ A+ F++M+R I+PN F+LS L C+ L
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
Query: 270 XXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCV 329
D+++ + L+D+Y K G + A VF+ ++ D++S N +I
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA 445
Query: 330 QHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
Q+ AL L M + G PN T+ S L AC
Sbjct: 446 QNGFGREALDLFERMINLGLQPNDVTVLSVLLAC 479
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 148/305 (48%), Gaps = 22/305 (7%)
Query: 40 QCFQSFTKPPI-----SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY 94
+ FQS + +Y ++L C K + G +H +++ GF + + L+++Y
Sbjct: 253 KAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMY 312
Query: 95 SKCGRFGYARKLVDQS------TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVK 148
+C LVD S E VSW++LISG VQNG + AL+ F M +K
Sbjct: 313 LRCS-------LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 149 CNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKL 208
N FT S L+ CS GR++HG+ GFD D + + L+ +Y KCG +R +
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLV 425
Query: 209 FGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR-- 266
F ++ V+S N + Y Q+ F EA+DLF+ M+ G++PN+ ++ +L AC R
Sbjct: 426 FDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLV 485
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
D ++ +VD+ + GR+E A + E+ +PD+V W +++
Sbjct: 486 EEGCELFDSFRKDKIMLTNDHYAC--MVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLS 543
Query: 327 GCVQH 331
C H
Sbjct: 544 ACKVH 548
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 131/280 (46%), Gaps = 10/280 (3%)
Query: 140 NDMCMLGVKCNEFT----FPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM 195
N +L + C+ T F +L+ C ++ ++ + + + +GF ++ + LV
Sbjct: 50 NQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDA 108
Query: 196 YAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSL 255
KCG + +R++F + +V+WN+L + ++ EAV++++ M+ + P+E++L
Sbjct: 109 SLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTL 168
Query: 256 SIILNACAGLR-NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT 314
S + A + L + F +ALVDMY K G+ A V + +
Sbjct: 169 SSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVE 228
Query: 315 HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDL--G 372
D+V A+I G Q + A+ M PN +T +S L +C KD+ G
Sbjct: 229 EKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG--NLKDIGNG 286
Query: 373 RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
+ +H ++K +S L+ MY +C ++ D+ RV++
Sbjct: 287 KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFK 326
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 185/367 (50%), Gaps = 2/367 (0%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSF-RNHLVSLYSKCGRFGYARKLVDQSTET 113
LL +++ S+ LG +HA +++ S P F N+L+++YSK AR LV + T
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESAR-LVLRLTPA 70
Query: 114 DVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
VVSW++LISG QNG AL+ F +M GV N+FTFP KA + + G+++
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFC 233
H ++V G D FV + MY K D+RKLF I ++ +WNA S V
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
EA++ F E R PN + LNAC+ + + D N L
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 294 VDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNV 353
+D Y K +I ++ +F E+ + VSW +++A VQ+ ++ A L + +
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 354 FTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYEL 413
F ISS L ACA + +LGR +H+ +K + FV L+DMY KC + D+ + ++
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 414 MPKKDII 420
MP+K+++
Sbjct: 371 MPEKNLV 377
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 179/369 (48%), Gaps = 9/369 (2%)
Query: 58 QCVASKSLTL-GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVV 116
+ VAS L + G ++HA ++ G D +Y K ARKL D+ E ++
Sbjct: 116 KAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLE 175
Query: 117 VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGM 176
+W+A IS V +G +EA+ AF + + N TF + L ACS LN+G ++HG+
Sbjct: 176 -TWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL 234
Query: 177 SVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEA 236
+ +GFD+D V N L+ Y KC Q+ S +F + + VSW +L + YVQ+ +A
Sbjct: 235 VLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 294
Query: 237 VDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
L+ + + ++F +S +L+ACAG+ F +ALVDM
Sbjct: 295 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 354
Query: 297 YSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM--KSSGACPNVF 354
Y K G IE++ F+E+ ++V+ N++I G D ALAL EM + G PN
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 355 TISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
T S L AC+ G + G ++ + I+ ++ + + +DM + M+ A
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI--VDMLGRAGMVERAYEFI 472
Query: 412 ELMPKKDII 420
+ MP + I
Sbjct: 473 KKMPIQPTI 481
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 136/288 (47%), Gaps = 9/288 (3%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I++ L+ C L LGM+LH ++R GF D S N L+ Y KC + + +++
Sbjct: 210 ITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI-RSSEIIFT 268
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
T VSW +L++ YVQN ++A + + V+ ++F SVL AC+ L +
Sbjct: 269 EMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLEL 328
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
GR +H +V + FV + LV MY KCG + DS + F + ++V+ N+L Y
Sbjct: 329 GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAH 388
Query: 230 SDFCVEAVDLFKEMV-RG-GIRPNEFSLSIILNACA---GLRNGSXXXXXXXXXXXXXXX 284
A+ LF+EM RG G PN + +L+AC+ + NG
Sbjct: 389 QGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPG 448
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH 331
+ +S +VDM + G +E A +++ P I W A+ C H
Sbjct: 449 AEHYS--CIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 192/385 (49%), Gaps = 46/385 (11%)
Query: 42 FQSFTKPPIS-YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSF--RNHLVSLYSKCG 98
FQ +K S Y LL C+ S S+ LG LHA RFG +P L+S+Y+KCG
Sbjct: 73 FQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCG 129
Query: 99 RFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVL 158
ARK+ D E ++ +WSA+I Y + +E F M GV ++F FP +L
Sbjct: 130 CIADARKVFDSMRERNLF-TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKIL 188
Query: 159 KACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVV 218
+ C+ D+ G+ +H + + G S V+N+++ +YAKCG+L + K F + V+
Sbjct: 189 QGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVI 248
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
+WN++ Y Q+ EAV+L KEM + GI P GL
Sbjct: 249 AWNSVLLAYCQNGKHEEAVELVKEMEKEGISP-------------GL------------- 282
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECN 334
+ N L+ Y++ G+ + A+ + +++ D+ +W A+I+G + +
Sbjct: 283 ---------VTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMR 333
Query: 335 DWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGL 394
AL + +M +G PN TI SA+ AC+ + + G ++HS +K+ D V L
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393
Query: 395 IDMYSKCEMLSDARRVYELMPKKDI 419
+DMYSKC L DAR+V++ + KD+
Sbjct: 394 VDMYSKCGKLEDARKVFDSVKNKDV 418
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 183/369 (49%), Gaps = 34/369 (9%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE-- 112
LL+ C K +EL + + G S N L+ Y++ G+ A L+ +
Sbjct: 254 LLAYCQNGKHEE-AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 113 -TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
T V +W+A+ISG + NG +AL F M + GV N T S + ACS K +N G
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGS 372
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
+VH ++V GF D V N+LV MY+KCG+L D+RK+F S+ V +WN++ + Y Q+
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
+C +A +LF M +RPN + + +++ ++NG D+ A
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGY--IKNG-----------------DEGEAM 473
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
L K G+++ A +WN +IAG +Q+ D AL L +M+ S P
Sbjct: 474 DLFQRMEKDGKVQRNTA-----------TWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
N TI S L ACA + + R++H C+++ + D+ V L D Y+K + +R ++
Sbjct: 523 NSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF 582
Query: 412 ELMPKKDII 420
M KDII
Sbjct: 583 LGMETKDII 591
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 165/374 (44%), Gaps = 48/374 (12%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ + +S C K + G E+H+ ++ GF D N LV +YSKCG+ ARK+ D
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
D V +W+++I+GY Q G+ +A F M ++ N T+
Sbjct: 413 VKNKD-VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW--------------- 456
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-----VAPSVVSWNALF 224
NT++ Y K G G++ LF + V + +WN +
Sbjct: 457 --------------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
+ Y+Q+ EA++LF++M PN ++ +L ACA L
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLD 556
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
NAL D Y+K G IE + +F + DI++WN++I G V H ALAL N+M
Sbjct: 557 AIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQM 616
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV----GLIDMYSK 400
K+ G PN T+SS + A +G D G+++ I D A+ ++ +Y +
Sbjct: 617 KTQGITPNRGTLSSIILAHGLMGNVDEGKKV---FYSIANDYHIIPALEHCSAMVYLYGR 673
Query: 401 CEMLSDARRVYELM 414
L +A + + M
Sbjct: 674 ANRLEEALQFIQEM 687
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 128/298 (42%), Gaps = 15/298 (5%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVV-----SWSALISGYVQNGFGKEALLAFNDM 142
N ++S Y K G G A L Q E D V +W+ +I+GY+QNG EAL F M
Sbjct: 457 NTMISGYIKNGDEGEAMDLF-QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Query: 143 CMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQL 202
N T S+L AC+ M R++HG + D+ V N L YAK G +
Sbjct: 516 QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDI 575
Query: 203 GDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
SR +F + +++WN+L YV A+ LF +M GI PN +LS I+ A
Sbjct: 576 EYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAH 635
Query: 263 AGLRN---GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDI 318
+ N G + S A+V +Y + R+E A+ +E+ +
Sbjct: 636 GLMGNVDEGKKVFYSIANDYHIIPALEHCS--AMVYLYGRANRLEEALQFIQEMNIQSET 693
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLH 376
W + + GC H D A+ + S P S + A+G K LGR L
Sbjct: 694 PIWESFLTGCRIHGDIDMAIHAAENLFSLE--PENTATESIVSQIYALGAK-LGRSLE 748
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW--ALALLNE 343
D F L+ MY+K G I +A VF+ + ++ +W+A+I G E N W L
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMI-GAYSRE-NRWREVAKLFRL 171
Query: 344 MKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEM 403
M G P+ F L+ CA G + G+ +HS +IK+ S V+ ++ +Y+KC
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 404 LSDARRVYELMPKKDII 420
L A + + M ++D+I
Sbjct: 232 LDFATKFFRRMRERDVI 248
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
F F ++ +LL C + E+H ++R + +N L Y+K G
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
Y+R + ET +++W++LI GYV +G AL FN M G+ N T S++ A
Sbjct: 577 YSRTIF-LGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAH 635
Query: 162 SIKKDLNMGRKV 173
+ +++ G+KV
Sbjct: 636 GLMGNVDEGKKV 647
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 197/397 (49%), Gaps = 5/397 (1%)
Query: 25 SRTIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDP 84
SR + + + N FQ P++ +LS + L LH + +GF D
Sbjct: 123 SRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDI 179
Query: 85 SFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCM 144
+ N +++LY KC G A+ L DQ + D+V SW+ +ISGY G E L M
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMV-SWNTMISGYASVGNMSEILKLLYRMRG 238
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
G++ ++ TF + L DL MGR +H V TGFD D + L+ MY KCG+
Sbjct: 239 DGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEA 298
Query: 205 SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG 264
S ++ +I VV W + S ++ +A+ +F EM++ G + +++ ++ +CA
Sbjct: 299 SYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQ 358
Query: 265 LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAV 324
L + D + N+L+ MY+K G ++ ++ +FE + D+VSWNA+
Sbjct: 359 LGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAI 418
Query: 325 IAGCVQHECNDWALALLNEMK-SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID 383
I+G Q+ AL L EMK + + FT+ S L+AC++ G +G+ +H +I+
Sbjct: 419 ISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF 478
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
V L+DMYSKC L A+R ++ + KD++
Sbjct: 479 IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV 515
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 205/420 (48%), Gaps = 14/420 (3%)
Query: 1 MNKTTLRFSYINSLSFKPQTIHTTSRTIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCV 60
+N T S+IN LS H + ++ + +++++N +FT P +LL C
Sbjct: 8 LNSTKYFNSHINHLSS-----HGDHKQVLSTFSSMLANKLLPDTFTFP-----SLLKACA 57
Query: 61 ASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWS 120
+ + L+ G+ +H ++ GFS D + LV+LY+K G +ARK+ ++ E D VV W+
Sbjct: 58 SLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERD-VVHWT 116
Query: 121 ALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVT 180
A+I Y + G EA N+M G+K T +L ++ + +H +V+
Sbjct: 117 AMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGV---LEITQLQCLHDFAVIY 173
Query: 181 GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLF 240
GFD D V N+++ +Y KC +GD++ LF + +VSWN + S Y E + L
Sbjct: 174 GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLL 233
Query: 241 KEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKG 300
M G+RP++ + L+ + + D AL+ MY K
Sbjct: 234 YRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKC 293
Query: 301 GRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSAL 360
G+ E + V E I + D+V W +I+G ++ + AL + +EM SG+ + I+S +
Sbjct: 294 GKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVV 353
Query: 361 KACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+CA +G DLG +H +++ D LI MY+KC L + ++E M ++D++
Sbjct: 354 ASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLV 413
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 177/353 (50%), Gaps = 9/353 (2%)
Query: 65 LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALIS 124
L +G LH +++ GF D + L+++Y KCG+ + ++++ DVV W+ +IS
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVC-WTVMIS 319
Query: 125 GYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
G ++ G ++AL+ F++M G + SV+ +C+ ++G VHG + G+
Sbjct: 320 GLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL 379
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS-DFCVEAVDLFKEM 243
D N+L+ MYAKCG L S +F + +VSWNA+ S Y Q+ D C +A+ LF+EM
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC-KALLLFEEM 438
Query: 244 VRGGIRP-NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
++ + F++ +L AC+ ALVDMYSK G
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGY 498
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
+E A F+ I+ D+VSW +IAG H D AL + +E SG PN + L +
Sbjct: 499 LEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Query: 363 CAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
C+ G G ++ S +++ ++ + + V +D+ + + + DA + Y+
Sbjct: 559 CSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACV--VDLLCRAKRIEDAFKFYK 609
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 186/371 (50%), Gaps = 1/371 (0%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P +T+ L V+ + LH+ +++ G+ + L++ YS CG AR + +
Sbjct: 146 PHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFE 205
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
D+VV W+ ++S YV+NG+ +++L + M M G N +TF + LKA +
Sbjct: 206 GILCKDIVV-WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFD 264
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
+ VHG + T + D V L+ +Y + G + D+ K+F + VV W+ + + +
Sbjct: 265 FAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
Q+ FC EAVDLF M + PNEF+LS ILN CA + D +
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIY 384
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
+NAL+D+Y+K +++ AV +F E++ + VSWN VI G A ++ E +
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
T SSAL ACA++ DLG Q+H IK + V+ LIDMY+KC + A+
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 409 RVYELMPKKDI 419
V+ M D+
Sbjct: 505 SVFNEMETIDV 515
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 165/335 (49%), Gaps = 3/335 (0%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P +YT L + + +H +++ + DP L+ LY++ G A K+
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
++ + DVV WS +I+ + QNGF EA+ F M V NEFT S+L C+I K
Sbjct: 305 FNEMPKNDVV-PWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
+G ++HG+ V GFD D +V+N L+ +YAKC ++ + KLF + + + VSWN +
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
Y +A +F+E +R + E + S L ACA L +
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
+N+L+DMY+K G I+ A +VF E+ D+ SWNA+I+G H AL +L+ MK
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
PN T L C+ G D G++ +I+
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 171/372 (45%), Gaps = 10/372 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y +L +C+ +H +++ G D N L++ Y K G A L D+
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 111 TETDVVVSWSALISGYV-QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
E + VS+ L GY Q+ G ++ + G + N F S LK +
Sbjct: 111 PERN-NVSFVTLAQGYACQDPIG-----LYSRLHREGHELNPHVFTSFLKLFVSLDKAEI 164
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
+H V G+DS+ FV L+ Y+ CG + +R +F I+ +V W + SCYV+
Sbjct: 165 CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVE 224
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ + +++ L M G PN ++ L A GL D
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAG-CVQHECNDWALALLNEMKSSG 348
L+ +Y++ G + +A VF E+ D+V W+ +IA C CN+ A+ L M+ +
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNE-AVDLFIRMREAF 343
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
PN FT+SS L CA LG QLH ++K+ D D +V+ LID+Y+KCE + A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 409 RVY-ELMPKKDI 419
+++ EL K ++
Sbjct: 404 KLFAELSSKNEV 415
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 122/268 (45%), Gaps = 4/268 (1%)
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
+ ++L+ C K D + +H + G D F N L+ Y K G D+ LF +
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX 272
+ VS+ L Y C + + L+ + R G N + L L
Sbjct: 111 PERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICP 166
Query: 273 XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHE 332
+ F AL++ YS G +++A VFE I DIV W +++ V++
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 333 CNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV 392
+ +L LL+ M+ +G PN +T +ALKA +G D + +H ++K D V V
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 393 GLIDMYSKCEMLSDARRVYELMPKKDII 420
GL+ +Y++ +SDA +V+ MPK D++
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 194/384 (50%), Gaps = 6/384 (1%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGF---SHDPSFRNHLVSLYSKCG 98
F + S L +CV+ L ++HA ++ G + P N+L+S+Y +CG
Sbjct: 87 FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCG 146
Query: 99 RFGYARKLVDQSTETDVVVSWSALISGYVQN-GFGKEALLAFNDMCMLGVKCNEFTFPSV 157
ARK+ D+ +VV S++AL S Y +N F A M VK N TF S+
Sbjct: 147 SLEQARKVFDKMPHRNVV-SYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV 217
++ C++ +D+ MG ++ + G+ + V +++ MY+ CG L +R++F +
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDA 265
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXX 277
V+WN + +++D + + F+ M+ G+ P +F+ SI+LN C+ L + S
Sbjct: 266 VAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHAR 325
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWA 337
D NAL+DMY G + A VF I +P++VSWN++I+GC ++ + A
Sbjct: 326 IIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQA 385
Query: 338 LALLNEM-KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLID 396
+ + + + S P+ +T S+A+ A A G+ LH + K+ + FV L+
Sbjct: 386 MLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLS 445
Query: 397 MYSKCEMLSDARRVYELMPKKDII 420
MY K A++V+++M ++D++
Sbjct: 446 MYFKNREAESAQKVFDVMKERDVV 469
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 181/377 (48%), Gaps = 3/377 (0%)
Query: 45 FTKPPIS-YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
+ KP S +T+L+ C + + +G L++ +I+ G+S + + ++ +YS CG A
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
R++ D D V +W+ +I G ++N ++ L+ F +M M GV +FT+ VL CS
Sbjct: 254 RRIFDCVNNRDAV-AWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNAL 223
++G+ +H +V+ +D + N L+ MY CG + ++ +FG I P++VSWN++
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 224 FSCYVQSDFCVEAVDLFKEMVRGGI-RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
S ++ F +A+ +++ ++R RP+E++ S ++A A
Sbjct: 373 ISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLG 432
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLN 342
F L+ MY K E+A VF+ + D+V W +I G + ++ A+
Sbjct: 433 YERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFI 492
Query: 343 EMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCE 402
EM + F++SS + AC+ + G H I+ D V L+DMY K
Sbjct: 493 EMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNG 552
Query: 403 MLSDARRVYELMPKKDI 419
A ++ L D+
Sbjct: 553 KYETAETIFSLASNPDL 569
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 174/369 (47%), Gaps = 8/369 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y+ +L+ C S +LG +HA +I D N L+ +Y CG A + +
Sbjct: 302 TYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI 361
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV-KCNEFTFPSVLKACSIKKDLNM 169
++V SW+++ISG +NGFG++A+L + + + + +E+TF + + A + +
Sbjct: 362 HNPNLV-SWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVH 420
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G+ +HG G++ FV TL+ MY K + ++K+F + VV W + + +
Sbjct: 421 GKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSR 480
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC---AGLRNGSXXXXXXXXXXXXXXXXD 286
AV F EM R R + FSLS ++ AC A LR G
Sbjct: 481 LGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMS- 539
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
ALVDMY K G+ E A +F ++PD+ WN+++ QH + AL+ ++
Sbjct: 540 --VCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE 597
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSD 406
+G P+ T S L AC+ G G+ L + + + + F ++++ SK ++ +
Sbjct: 598 NGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDE 657
Query: 407 ARRVYELMP 415
A + E P
Sbjct: 658 ALELIEQSP 666
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 162/351 (46%), Gaps = 19/351 (5%)
Query: 84 PSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWS-ALISGYVQNG---------FGK 133
P N+L+S+Y +C ARK+ D+ + ++V + + + YV G G
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 134 EALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS---DGFVAN 190
++ F + + E T + C L R++H + + G + + N
Sbjct: 82 FQMIFFMPLNEIASSVVELT-----RKCVSITVLKRARQIHALVLTAGAGAATESPYANN 136
Query: 191 TLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS-DFCVEAVDLFKEMVRGGIR 249
L+ MY +CG L +RK+F + +VVS+NAL+S Y ++ DF A L M ++
Sbjct: 137 NLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK 196
Query: 250 PNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAV 309
PN + + ++ CA L + + +++ MYS G +E+A +
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRI 256
Query: 310 FEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK 369
F+ + + D V+WN +I G ++++ + L M SG P FT S L C+ +G
Sbjct: 257 FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 370 DLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
LG+ +H+ +I D+ +D + L+DMY C + +A V+ + +++
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLV 367
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 7/289 (2%)
Query: 46 TKPPISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
T P YT +S + G LH + + G+ L+S+Y K A
Sbjct: 397 TPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESA 456
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
+K+ D E DVV+ W+ +I G+ + G + A+ F +M + + F+ SV+ ACS
Sbjct: 457 QKVFDVMKERDVVL-WTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSD 515
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNAL 223
L G H +++ TGFD V LV MY K G+ + +F P + WN++
Sbjct: 516 MAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSM 575
Query: 224 FSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXX 283
Y Q +A+ F++++ G P+ + +L AC+ R +
Sbjct: 576 LGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSH-RGSTLQGKFLWNQMKEQG 634
Query: 284 XXDQFSA-NALVDMYSKGGRIENAVAVFEEITHPDIVS--WNAVIAGCV 329
F + +V++ SK G ++ A+ + E+ + + W +++ CV
Sbjct: 635 IKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACV 683
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 188/369 (50%), Gaps = 11/369 (2%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
Y S A +++ G ++H ++FGF D L+ LYS+ G AR L D+
Sbjct: 153 YRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP 212
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
D+ SW+A+ISGY Q+G KEAL N + + + T S+L AC+ D N G
Sbjct: 213 VRDMG-SWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGV 267
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
+H S+ G +S+ FV+N L+ +YA+ G+L D +K+F + ++SWN++ Y ++
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNE 327
Query: 232 FCVEAVDLFKEMVRGGIRPN---EFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
+ A+ LF+EM I+P+ SL+ IL+ +R + D
Sbjct: 328 QPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR--ACRSVQGFTLRKGWFLEDIT 385
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
NA+V MY+K G +++A AVF + + D++SWN +I+G Q+ A+ + N M+ G
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 349 A-CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
N T S L AC+ G G +LH L+K D FV L DMY KC L DA
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 408 RRVYELMPK 416
++ +P+
Sbjct: 506 LSLFYQIPR 514
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 177/374 (47%), Gaps = 16/374 (4%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ +LLS C + G+ +H++ I+ G + N L+ LY++ GR +K+ D+
Sbjct: 248 VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR 307
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
D++ SW+++I Y N A+ F +M + ++ + T S+ S D+
Sbjct: 308 MYVRDLI-SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 366
Query: 170 GRKVHGMSVVTG-FDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
R V G ++ G F D + N +VVMYAK G + +R +F + V+SWN + S Y
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426
Query: 229 QSDFCVEAVDLFKEMVRGG-IRPNEFSLSIILNACA---GLRNGSXXXXXXXXXXXXXXX 284
Q+ F EA++++ M G I N+ + +L AC+ LR G
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG---MKLHGRLLKNGLY 483
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
D F +L DMY K GR+E+A+++F +I + V WN +IA H + A+ L EM
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG----LIDMYSK 400
G P+ T + L AC+ G D G+ C + TD ++ ++DMY +
Sbjct: 544 LDEGVKPDHITFVTLLSACSHSGLVDEGQW---CFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 401 CEMLSDARRVYELM 414
L A + + M
Sbjct: 601 AGQLETALKFIKSM 614
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 132/257 (51%), Gaps = 8/257 (3%)
Query: 80 FSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAF 139
F D + N +V +Y+K G AR + + TDV+ SW+ +ISGY QNGF EA+ +
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI-SWNTIISGYAQNGFASEAIEMY 438
Query: 140 NDMCMLG-VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAK 198
N M G + N+ T+ SVL ACS L G K+HG + G D FV +L MY K
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGK 498
Query: 199 CGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSII 258
CG+L D+ LF I + V WN L +C+ +AV LFKEM+ G++P+ + +
Sbjct: 499 CGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTL 558
Query: 259 LNAC--AGLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT- 314
L+AC +GL + G + +VDMY + G++E A+ + ++
Sbjct: 559 LSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY--GCMVDMYGRAGQLETALKFIKSMSL 616
Query: 315 HPDIVSWNAVIAGCVQH 331
PD W A+++ C H
Sbjct: 617 QPDASIWGALLSACRVH 633
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 171/354 (48%), Gaps = 14/354 (3%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
LHA L+ + LV+LY G AR D DV +W+ +ISGY + G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY-AWNLMISGYGRAG 131
Query: 131 FGKEALLAFNDMCML--GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFV 188
E + F+ + ML G+ + TFPSVLKAC D G K+H +++ GF D +V
Sbjct: 132 NSSEVIRCFS-LFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYV 187
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI 248
A +L+ +Y++ +G++R LF + + SWNA+ S Y QS EA+ L G+
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGL 242
Query: 249 RP-NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
R + ++ +L+AC + + + F +N L+D+Y++ GR+ +
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
VF+ + D++SWN++I +E A++L EM+ S P+ T+ S + +G
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 368 FKDLGRQLHS-CLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
R + L K D + ++ MY+K ++ AR V+ +P D+I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 124/256 (48%), Gaps = 8/256 (3%)
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
+L + +H VV+ + ++ LV +Y G + +R F I V +WN + S
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 226 CYVQSDFCVEAVDLFKE-MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
Y ++ E + F M+ G+ P+ + +L AC + +G+
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMW-- 183
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
D + A +L+ +YS+ + NA +F+E+ D+ SWNA+I+G Q AL L N +
Sbjct: 184 -DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
++ + T+ S L AC G + G +HS IK +S+ FV+ LID+Y++ L
Sbjct: 243 RAMDSV----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 405 SDARRVYELMPKKDII 420
D ++V++ M +D+I
Sbjct: 299 RDCQKVFDRMYVRDLI 314
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 200/382 (52%), Gaps = 19/382 (4%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
F +FT Y+ LS CV S+ LG++L + +++ G D N +++YS+ G F
Sbjct: 172 FDAFT-----YSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFR 226
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNG-FGKEALLAFNDMCMLGVKCNEFTFPSVLKA 160
AR++ D+ + D++ SW++L+SG Q G FG EA++ F DM GV+ + +F SV+
Sbjct: 227 GARRVFDEMSFKDMI-SWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITT 285
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
C + DL + R++HG+ + G++S V N L+ Y+KCG L + +F + +VVSW
Sbjct: 286 CCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSW 345
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXX 280
+ S +AV +F M G+ PNE + ++NA
Sbjct: 346 TTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIK 400
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALAL 340
+ N+ + +Y+K +E+A FE+IT +I+SWNA+I+G Q+ + AL +
Sbjct: 401 TGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKM 460
Query: 341 LNEMKSSGACPNVFTISSALKACAAVGFKDL----GRQLHSCLIKIDTDSDFFVAVGLID 396
++ PN +T S L A A +D+ G++ H+ L+K+ +S V+ L+D
Sbjct: 461 FLS-AAAETMPNEYTFGSVLNAIAFA--EDISVKQGQRCHAHLLKLGLNSCPVVSSALLD 517
Query: 397 MYSKCEMLSDARRVYELMPKKD 418
MY+K + ++ +V+ M +K+
Sbjct: 518 MYAKRGNIDESEKVFNEMSQKN 539
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 179/369 (48%), Gaps = 10/369 (2%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+S+T++++ C L L ++H I+ G+ N L+S YSKCG + + Q
Sbjct: 277 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 336
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+E +VV SW+ +IS +A+ F +M GV NE TF ++ A + +
Sbjct: 337 MSERNVV-SWTTMISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKE 390
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G K+HG+ + TGF S+ V N+ + +YAK L D++K F I ++SWNA+ S + Q
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ-- 287
+ F EA+ +F + PNE++ +LNA A + S +
Sbjct: 451 NGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCP 509
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
++AL+DMY+K G I+ + VF E++ + W ++I+ H + + L ++M
Sbjct: 510 VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE 569
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKI-DTDSDFFVAVGLIDMYSKCEMLSD 406
P++ T S L AC G D G ++ + +I++ + + ++DM + L +
Sbjct: 570 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 629
Query: 407 ARRVYELMP 415
A + +P
Sbjct: 630 AEELMSEVP 638
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 168/367 (45%), Gaps = 14/367 (3%)
Query: 59 CVASKS----LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
C+A K+ L G ++H GF+ N ++ +Y K GRF A + + + D
Sbjct: 82 CLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
VV SW+ ++SG+ N AL M GV + FT+ + L C + +G ++
Sbjct: 142 VV-SWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ 197
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD-FC 233
V TG +SD V N+ + MY++ G +R++F + ++SWN+L S Q F
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFG 257
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
EAV +F++M+R G+ + S + ++ C + N L
Sbjct: 258 FEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNIL 317
Query: 294 VDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNV 353
+ YSK G +E +VF +++ ++VSW +I+ D A+++ M+ G PN
Sbjct: 318 MSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNMRFDGVYPNE 372
Query: 354 FTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYEL 413
T + A G ++H IK S+ V I +Y+K E L DA++ +E
Sbjct: 373 VTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFED 432
Query: 414 MPKKDII 420
+ ++II
Sbjct: 433 ITFREII 439
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 9/322 (2%)
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV---KCNEFTFPSVLK 159
A KL D S++ + S + IS ++ AL F + LG +E T LK
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 160 ACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS 219
AC + DL G ++HG S +GF S V+N ++ MY K G+ ++ +F ++V P VVS
Sbjct: 87 AC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
WN + S + + A++ M G+ + F+ S L+ C G
Sbjct: 145 WNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW-AL 338
D N+ + MYS+ G A VF+E++ D++SWN++++G Q + A+
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMY 398
+ +M G + + +S + C L RQ+H IK +S V L+ Y
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 399 SKCEMLSDARRVYELMPKKDII 420
SKC +L + V+ M +++++
Sbjct: 322 SKCGVLEAVKSVFHQMSERNVV 343
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 202/404 (50%), Gaps = 41/404 (10%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSL--YSKCGRFGYARKLVDQ 109
+ +L+ +CV+ + L + H H+IR G DP + L ++ S YARK+ D+
Sbjct: 33 HISLIERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDE 89
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC--NEFTFPSVLKACSIKKDL 167
+ + +W+ LI Y ++ AF DM +C N++TFP ++KA + L
Sbjct: 90 IPKPNSF-AWNTLIRAYASGPDPVLSIWAFLDMVSES-QCYPNKYTFPFLIKAAAEVSSL 147
Query: 168 NMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
++G+ +HGM+V + SD FVAN+L+ Y CG L + K+F +I VVSWN++ + +
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
VQ +A++LFK+M ++ + ++ +L+ACA +RN +
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 288 FSANALVDMYSKGGRIENAVAVFE-------------------------------EITHP 316
ANA++DMY+K G IE+A +F+ +
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMK-SSGACPNVFTISSALKACAAVGFKDLGRQL 375
DIV+WNA+I+ Q+ + AL + +E++ N T+ S L ACA VG +LGR +
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 376 HSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
HS + K +F V LI MYSKC L +R V+ + K+D+
Sbjct: 388 HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 184/420 (43%), Gaps = 48/420 (11%)
Query: 34 NVVSNSQCFQSFTKPPISYTN--LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLV 91
++VS SQC+ P YT L+ SL+LG LH ++ D N L+
Sbjct: 120 DMVSESQCY------PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI 173
Query: 92 SLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNE 151
Y CG A K+ E DVV SW+++I+G+VQ G +AL F M VK +
Sbjct: 174 HCYFSCGDLDSACKVFTTIKEKDVV-SWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232
Query: 152 FTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF-- 209
T VL AC+ ++L GR+V + + +AN ++ MY KCG + D+++LF
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 210 -----------------------------GSIVAPSVVSWNALFSCYVQSDFCVEAVDLF 240
S+ +V+WNAL S Y Q+ EA+ +F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 241 KEM-VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
E+ ++ ++ N+ +L L+ACA + + +AL+ MYSK
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 300 GGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSA 359
G +E + VF + D+ W+A+I G H C + A+ + +M+ + PN T ++
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472
Query: 360 LKACAAVGFKD----LGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
AC+ G D L Q+ S + + + ++D+ + L A + E MP
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHY---ACIVDVLGRSGYLEKAVKFIEAMP 529
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 35/316 (11%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ +LS C ++L G ++ +++ + + + N ++ +Y+KCG A++L D
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 110 STETDVV------------------------------VSWSALISGYVQNGFGKEALLAF 139
E D V V+W+ALIS Y QNG EAL+ F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 140 NDMCML-GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAK 198
+++ + +K N+ T S L AC+ L +GR +H G + V + L+ MY+K
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 199 CGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSII 258
CG L SR++F S+ V W+A+ EAVD+F +M ++PN + + +
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472
Query: 259 LNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP 316
AC+ GL + + ++ A +VD+ + G +E AV E + P
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYA-CIVDVLGRSGYLEKAVKFIEAMPIP 531
Query: 317 DIVS-WNAVIAGCVQH 331
S W A++ C H
Sbjct: 532 PSTSVWGALLGACKIH 547
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 4/186 (2%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I+ + LS C +L LG +H+++ + G + + L+ +YSKCG +R++ +
Sbjct: 366 ITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 425
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ DV V WSA+I G +G G EA+ F M VK N TF +V ACS ++
Sbjct: 426 VEKRDVFV-WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 170 GRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF-SC 226
+ H M G + +V + + G L + K ++ + PS W AL +C
Sbjct: 485 AESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 544
Query: 227 YVQSDF 232
+ ++
Sbjct: 545 KIHANL 550
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 286 DQFSANALVDM--YSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNE 343
D +SA+ L M S +E A VF+EI P+ +WN +I ++ +
Sbjct: 61 DPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLD 120
Query: 344 MKSSGAC-PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCE 402
M S C PN +T +KA A V LG+ LH +K SD FVA LI Y C
Sbjct: 121 MVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG 180
Query: 403 MLSDARRVYELMPKKDII 420
L A +V+ + +KD++
Sbjct: 181 DLDSACKVFTTIKEKDVV 198
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 173/355 (48%), Gaps = 1/355 (0%)
Query: 63 KSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSAL 122
KS+ LG+ +H ++R F D +N L+++Y G+ AR + D DV+ SW+ +
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI-SWNTM 189
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGF 182
ISGY +NG+ +AL+ F+ M V + T S+L C KDL MGR VH +
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
V N LV MY KCG++ ++R +F + V++W + + Y + A++L +
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
M G+RPN +++ +++ C + D +L+ MY+K R
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
++ VF + W+A+IAGCVQ+E AL L M+ PN+ T++S L A
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 363 CAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
AA+ +H L K S A GL+ +YSKC L A +++ + +K
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 179/367 (48%), Gaps = 12/367 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSL----YSKCGRFGYARKL 106
Y +LL+ A++S++ LH H+I G H++S Y+ CG YARKL
Sbjct: 17 QYQSLLNHFAATQSISKTKALHCHVITGG-----RVSGHILSTLSVTYALCGHITYARKL 71
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC--NEFTFPSVLKACSIK 164
++ ++ ++ S++ +I YV+ G +A+ F M GVKC + +T+P V KA
Sbjct: 72 FEEMPQSSLL-SYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGEL 130
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
K + +G VHG + + F D +V N L+ MY G++ +R +F + V+SWN +
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
S Y ++ + +A+ +F MV + + ++ +L C L++
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
NALV+MY K GR++ A VF+ + D+++W +I G + + AL L M
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLM 310
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
+ G PN TI+S + C + G+ LH ++ SD + LI MY+KC+ +
Sbjct: 311 QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV 370
Query: 405 SDARRVY 411
RV+
Sbjct: 371 DLCFRVF 377
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 173/369 (46%), Gaps = 10/369 (2%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTET 113
++L C K L +G +H + +N LV++Y KCGR AR + D+
Sbjct: 223 SMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR 282
Query: 114 DVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
DV+ +W+ +I+GY ++G + AL M GV+ N T S++ C +N G+ +
Sbjct: 283 DVI-TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL 341
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFC 233
HG +V SD + +L+ MYAKC ++ ++F W+A+ + VQ++
Sbjct: 342 HGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELV 401
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
+A+ LFK M R + PN +L+ +L A A L + +A L
Sbjct: 402 SDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGL 461
Query: 294 VDMYSKGGRIENAVAVF----EEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
V +YSK G +E+A +F E+ D+V W A+I+G H AL + EM SG
Sbjct: 462 VHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGV 521
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLI---KIDTDSDFFVAVGLIDMYSKCEMLSD 406
PN T +SAL AC+ G + G L ++ K S+ + + +D+ + L +
Sbjct: 522 TPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCI--VDLLGRAGRLDE 579
Query: 407 ARRVYELMP 415
A + +P
Sbjct: 580 AYNLITTIP 588
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 134/299 (44%), Gaps = 11/299 (3%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
F+ ++ +L+S C + + G LH +R D L+S+Y+KC R
Sbjct: 312 FEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVD 371
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
++ +++ WSA+I+G VQN +AL F M V+ N T S+L A
Sbjct: 372 LCFRVFSGASKYH-TGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAY 430
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV----APSV 217
+ DL +H TGF S A LV +Y+KCG L + K+F I + V
Sbjct: 431 AALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXX 274
V W AL S Y A+ +F EMVR G+ PNE + + LNAC +GL G
Sbjct: 491 VLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRF 550
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHE 332
+ ++ +VD+ + GR++ A + I P W A++A CV HE
Sbjct: 551 MLEHYKTLARSNHYT--CIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHE 607
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 135/269 (50%), Gaps = 3/269 (1%)
Query: 154 FPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV 213
+ S+L + + ++ + +H V+TG G + +TL V YA CG + +RKLF +
Sbjct: 18 YQSLLNHFAATQSISKTKALH-CHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIR--PNEFSLSIILNACAGLRNGSXX 271
S++S+N + YV+ +A+ +F MV G++ P+ ++ + A L++
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH 331
D++ NAL+ MY G++E A VF+ + + D++SWN +I+G ++
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVA 391
+ AL + + M + + TI S L C + ++GR +H + + V
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 392 VGLIDMYSKCEMLSDARRVYELMPKKDII 420
L++MY KC + +AR V++ M ++D+I
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVI 285
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 187/373 (50%), Gaps = 3/373 (0%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDP--SFRNHLVSLYSKCGRFGYARKLV 107
+++T LL C + ++HA ++ GF +P + N L+ Y + R A L
Sbjct: 148 VTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 108 DQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL 167
++ E D V +++ LI+GY ++G E++ F M G + ++FTF VLKA D
Sbjct: 208 EEIPEKDSV-TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 168 NMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
+G+++H +SV TGF D V N ++ Y+K ++ ++R LF + VS+N + S Y
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
Q+D ++ F+EM G F + +L+ A L +
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
N+LVDMY+K E A +F+ + VSW A+I+G VQ + L L +M+ S
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
+ T ++ LKA A+ LG+QLH+ +I+ + F GL+DMY+KC + DA
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 408 RRVYELMPKKDII 420
+V+E MP ++ +
Sbjct: 507 VQVFEEMPDRNAV 519
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 181/377 (48%), Gaps = 7/377 (1%)
Query: 43 QSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
QS +P +++ +L V LG +LHA + GFS D S N ++ YSK R
Sbjct: 243 QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVL 302
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
R L D+ E D V S++ +IS Y Q + +L F +M +G F F ++L
Sbjct: 303 ETRMLFDEMPELDFV-SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIA 361
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWN 221
+ L MGR++H +++ DS V N+LV MYAKC ++ +F S+ + VSW
Sbjct: 362 ANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWT 421
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
AL S YVQ + LF +M +R ++ + + +L A A +
Sbjct: 422 ALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS 481
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALL 341
+ FS + LVDMY+K G I++AV VFEE+ + VSWNA+I+ + + A+
Sbjct: 482 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAF 541
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGR---QLHSCLIKIDTDSDFFVAVGLIDMY 398
+M SG P+ +I L AC+ GF + G Q S + I + ++D+
Sbjct: 542 AKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC--MLDLL 599
Query: 399 SKCEMLSDARRVYELMP 415
+ ++A ++ + MP
Sbjct: 600 GRNGRFAEAEKLMDEMP 616
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 7/338 (2%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N ++S + K G AR L D + VV+W+ L+ Y +N EA F MC
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDR-TVVTWTILMGWYARNSHFDEAFKLFRQMCR-SS 140
Query: 148 KC---NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF--VANTLVVMYAKCGQL 202
C + TF ++L C+ N +VH +V GFD++ F V+N L+ Y + +L
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 203 GDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
+ LF I V++N L + Y + E++ LF +M + G +P++F+ S +L A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 263 AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWN 322
GL + + D N ++D YSK R+ +F+E+ D VS+N
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 323 AVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKI 382
VI+ Q + + +L EM+ G F ++ L A + +GRQLH +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 383 DTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
DS V L+DMY+KCEM +A +++ +P++ +
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 156/336 (46%), Gaps = 17/336 (5%)
Query: 40 QCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGR 99
QC F + + +LS SL +G +LH + N LV +Y+KC
Sbjct: 343 QCM-GFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM 401
Query: 100 FGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLK 159
F A +L+ +S VSW+ALISGYVQ G L F M ++ ++ TF +VLK
Sbjct: 402 FEEA-ELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460
Query: 160 ACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS 219
A + L +G+++H + +G + F + LV MYAKCG + D+ ++F + + VS
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXX 276
WNAL S + + A+ F +M+ G++P+ S+ +L AC+ + G+
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMS 580
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECND 335
++ ++D+ + GR A + +E+ PD + W++V+ C H+
Sbjct: 581 PIYGITPKKKHYA--CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHK--- 635
Query: 336 WALALLNEMKSSGACPNVFTISSALKACAAVGFKDL 371
N+ + A +F++ A A V ++
Sbjct: 636 ------NQSLAERAAEKLFSMEKLRDAAAYVSMSNI 665
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 198/376 (52%), Gaps = 10/376 (2%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFG-FSHDPSFRNHLVSLYSKC-GRFGYARKLVDQ 109
YT ++ C S + +G L++ G F D L+ ++ K F A K+ D+
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+E +VV +W+ +I+ +Q GF +EA+ F DM + G + ++FT SV AC+ ++L++
Sbjct: 229 MSELNVV-TWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKC---GQLGDSRKLFGSIVAPSVVSWNALFSC 226
G+++H ++ +G D V +LV MYAKC G + D RK+F + SV+SW AL +
Sbjct: 288 GKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 227 YVQS-DFCVEAVDLFKEMV-RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
Y+++ + EA++LF EM+ +G + PN F+ S AC L +
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+ AN+++ M+ K R+E+A FE ++ ++VS+N + G ++ + A LL+E+
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
+ FT +S L A VG G Q+HS ++K+ + V LI MYSKC +
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 405 SDARRVYELMPKKDII 420
A RV+ M +++I
Sbjct: 526 DTASRVFNFMENRNVI 541
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 198/381 (51%), Gaps = 13/381 (3%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+++++LL C+ ++ LG +HA LI F D N L+SLYSK G A + +
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 110 STE--TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL 167
VVSWSA+++ Y NG +A+ F + LG+ N++ + +V++ACS +
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV 182
Query: 168 NMGRKVHGMSVVTG-FDSDGFVANTLVVMYAKC-GQLGDSRKLFGSIVAPSVVSWNALFS 225
+GR G + TG F+SD V +L+ M+ K ++ K+F + +VV+W + +
Sbjct: 183 GVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX 285
+Q F EA+ F +MV G ++F+LS + +ACA L N S
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 286 DQFSANALVDMYSK---GGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECN--DWALAL 340
D +LVDMY+K G +++ VF+ + ++SW A+I G +++ CN A+ L
Sbjct: 303 D--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN-CNLATEAINL 359
Query: 341 LNEMKSSGAC-PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYS 399
+EM + G PN FT SSA KAC + +G+Q+ K S+ VA +I M+
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFV 419
Query: 400 KCEMLSDARRVYELMPKKDII 420
K + + DA+R +E + +K+++
Sbjct: 420 KSDRMEDAQRAFESLSEKNLV 440
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 184/379 (48%), Gaps = 13/379 (3%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKC---GRFG 101
F + +++ S C ++L+LG +LH+ IR G D LV +Y+KC G
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVD 322
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQN-GFGKEALLAFNDMCMLG-VKCNEFTFPSVLK 159
RK+ D+ E V+SW+ALI+GY++N EA+ F++M G V+ N FTF S K
Sbjct: 323 DCRKVFDR-MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK 381
Query: 160 ACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS 219
AC D +G++V G + G S+ VAN+++ M+ K ++ D+++ F S+ ++VS
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS 441
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
+N ++ +A L E+ + + F+ + +L+ A + +
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALA 339
+Q NAL+ MYSK G I+ A VF + + +++SW ++I G +H L
Sbjct: 502 KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLE 561
Query: 340 LLNEMKSSGACPNVFTISSALKACAAVGFKDLG-RQLHSCLI--KIDTDSDFFVAVGLID 396
N+M G PN T + L AC+ VG G R +S KI + + ++D
Sbjct: 562 TFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC--MVD 619
Query: 397 MYSKCEMLSDARRVYELMP 415
+ + +L+DA MP
Sbjct: 620 LLCRAGLLTDAFEFINTMP 638
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 158/368 (42%), Gaps = 16/368 (4%)
Query: 1 MNKTTLRFSYINSLSFKPQTIHTTSRTIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCV 60
M+ T L Y+ + + + I+ S I +Q +V N F S K C
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMI--TQGHVEPNHFTFSSAFKA----------CG 384
Query: 61 ASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWS 120
+G ++ + G + + S N ++S++ K R A++ + +E ++V S++
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV-SYN 443
Query: 121 ALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVT 180
+ G +N ++A +++ + + FTF S+L + + G ++H V
Sbjct: 444 TFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL 503
Query: 181 GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLF 240
G + V N L+ MY+KCG + + ++F + +V+SW ++ + + + F + ++ F
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 241 KEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA-LVDMYSK 299
+M+ G++PNE + IL+AC+ + S + A +VD+ +
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 300 GGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWA-LALLNEMKSSGACPNVFTIS 357
G + +A + D++ W + C H + LA ++ P +
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 358 SALKACAA 365
S + ACA
Sbjct: 684 SNIYACAG 691
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 185/396 (46%), Gaps = 47/396 (11%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV-VVSWSALISGYVQN 129
+H L+ FG + +HL+S Y G +A L+ + +D V W++LI Y N
Sbjct: 47 IHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
G + L F M L + +TFP V KAC + G H +S+VTGF S+ FV
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG-GI 248
N LV MY++C L D+RK+F + VVSWN++ Y + A+++F M G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 249 RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVA 308
RP+ +L +L CA L S + F N LVDMY+K G ++ A
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 309 VFEEITHPDIVSWNAVIAGC--------------------VQHECNDW------------ 336
VF ++ D+VSWNA++AG ++ + W
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 337 ---ALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTD-------S 386
AL + +M SSG PN T+ S L CA+VG G+++H IK D
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 387 DFFVAVGLIDMYSKCEMLSDARRVYE-LMPK-KDII 420
+ V LIDMY+KC+ + AR +++ L PK +D++
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 206/423 (48%), Gaps = 49/423 (11%)
Query: 44 SFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
S+T ++ + C S+ G HA + GF + N LV++YS+C A
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMC-MLGVKCNEFTFPSVLKACS 162
RK+ D+ + DVV SW+++I Y + G K AL F+ M G + + T +VL C+
Sbjct: 182 RKVFDEMSVWDVV-SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
++G+++H +V + + FV N LV MYAKCG + ++ +F ++ VVSWNA
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 223 L-----------------------------------FSCYVQSDFCVEAVDLFKEMVRGG 247
+ S Y Q EA+ + ++M+ G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 248 IRPNEFSLSIILNACA---GLRNGSXXXXXXXXXXXXXXXX----DQFSANALVDMYSKG 300
I+PNE +L +L+ CA L +G + N L+DMY+K
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 301 GRIENAVAVFEEIT--HPDIVSWNAVIAGCVQHECNDWALALLNEM--KSSGACPNVFTI 356
+++ A A+F+ ++ D+V+W +I G QH + AL LL+EM + PN FTI
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 357 SSALKACAAVGFKDLGRQLHSCLIKIDTDS-DFFVAVGLIDMYSKCEMLSDARRVYELMP 415
S AL ACA++ +G+Q+H+ ++ ++ FV+ LIDMY+KC +SDAR V++ M
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM 540
Query: 416 KKD 418
K+
Sbjct: 541 AKN 543
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 167/351 (47%), Gaps = 30/351 (8%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCM 144
N +V+ YS+ GRF A +L ++ E + VV+WSA ISGY Q G G EAL M
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSV-------VTGFDSDGFVANTLVVMYA 197
G+K NE T SVL C+ L G+++H ++ G + V N L+ MYA
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 198 KCGQLGDSRKLFGSIVAPS--VVSWNALFSCYVQSDFCVEAVDLFKEMVRGG--IRPNEF 253
KC ++ +R +F S+ VV+W + Y Q +A++L EM RPN F
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 254 SLSIILNAC---AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
++S L AC A LR G F +N L+DMY+K G I +A VF
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPL--FVSNCLIDMYAKCGSISDARLVF 536
Query: 311 EEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD 370
+ + + V+W +++ G H + AL + +EM+ G + T+ L AC+ G D
Sbjct: 537 DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMID 596
Query: 371 LGRQLHSCLIKIDTDSDFFVAVG------LIDMYSKCEMLSDARRVYELMP 415
G + + + + F V+ G L+D+ + L+ A R+ E MP
Sbjct: 597 QGMEYFNRMKTV-----FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP 642
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 175/355 (49%), Gaps = 28/355 (7%)
Query: 40 QCFQSFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRF-------GFSHDPSFRNHLV 91
Q S KP ++ ++LS C + +L G E+H + I++ G + N L+
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 92 SLYSKCGRFGYARKLVDQ-STETDVVVSWSALISGYVQNGFGKEALLAFNDM----CMLG 146
+Y+KC + AR + D S + VV+W+ +I GY Q+G +AL ++M C
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ-- 472
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS-DGFVANTLVVMYAKCGQLGDS 205
+ N FT L AC+ L +G+++H ++ ++ FV+N L+ MYAKCG + D+
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 206 RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG- 264
R +F +++A + V+W +L + Y + EA+ +F EM R G + + +L ++L AC+
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Query: 265 --LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSW 321
+ G + ++ LVD+ + GR+ A+ + EE+ P V W
Sbjct: 593 GMIDQGMEYFNRMKTVFGVSPGPEHYA--CLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650
Query: 322 NAVIAGCVQH---ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
A ++ C H E ++A + E+ S+ +T+ S L A A +KD+ R
Sbjct: 651 VAFLSCCRIHGKVELGEYAAEKITELASNH--DGSYTLLSNLYANAG-RWKDVTR 702
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 198/381 (51%), Gaps = 7/381 (1%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
F +Y ++ SL G ++HA +I+ GF D N L+SLY K G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
A K+ ++ E D+V SW+++ISGY+ G G +L+ F +M G K + F+ S L AC
Sbjct: 183 DAEKVFEEMPERDIV-SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 162 SIKKDLNMGRKVHGMSVVTGFDS-DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
S MG+++H +V + ++ D V +++ MY+K G++ + ++F ++ ++V+W
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301
Query: 221 NALFSCYVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
N + CY ++ +A F++M + G++P+ + +L A A L +
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGF 361
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALA 339
+ AL+DMY + G++++A +F+ + +++SWN++IA VQ+ N AL
Sbjct: 362 LPHMVLE----TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 417
Query: 340 LLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYS 399
L E+ S P+ TI+S L A A GR++H+ ++K S+ + L+ MY+
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 400 KCEMLSDARRVYELMPKKDII 420
C L DAR+ + + KD++
Sbjct: 478 MCGDLEDARKCFNHILLKDVV 498
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 157/321 (48%), Gaps = 9/321 (2%)
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A +L D+ + D + W+ +I G+ G EA+ ++ M GVK + FT+P V+K+ +
Sbjct: 83 ALQLFDEMNKADAFL-WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
L G+K+H M + GF SD +V N+L+ +Y K G D+ K+F + +VSWN+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXX-XXXXXX 281
+ S Y+ ++ LFKEM++ G +P+ FS L AC+ + +
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH--ECNDWALA 339
D +++DMYSK G + A +F + +IV+WN +I GC D L
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI-GCYARNGRVTDAFLC 320
Query: 340 LLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYS 399
+ +G P+V T + L A A + GR +H ++ + LIDMY
Sbjct: 321 FQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYG 376
Query: 400 KCEMLSDARRVYELMPKKDII 420
+C L A +++ M +K++I
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVI 397
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 178/376 (47%), Gaps = 12/376 (3%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGF-SHDPSFRNHLVSLYSKCGRFGYA 103
F S + L C S +G E+H H +R + D ++ +YSK G YA
Sbjct: 227 FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA 286
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCML-GVKCNEFTFPSVLKACS 162
++ + + ++V +W+ +I Y +NG +A L F M G++ + T ++L A +
Sbjct: 287 ERIFNGMIQRNIV-AWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA 345
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
I + GR +HG ++ GF + L+ MY +CGQL + +F + +V+SWN+
Sbjct: 346 ILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNS 401
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
+ + YVQ+ A++LF+E+ + P+ +++ IL A A + S
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLN 342
+ N+LV MY+ G +E+A F I D+VSWN++I H ++ L +
Sbjct: 462 YWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFS 521
Query: 343 EMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYS 399
EM +S PN T +S L AC+ G D G + + + ID + + ++D+
Sbjct: 522 EMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGC--MLDLIG 579
Query: 400 KCEMLSDARRVYELMP 415
+ S A+R E MP
Sbjct: 580 RTGNFSAAKRFLEEMP 595
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 119/229 (51%), Gaps = 11/229 (4%)
Query: 41 CFQSFTKPP------ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY 94
CFQ ++ I+ NLL + ++ G +H + +R GF L+ +Y
Sbjct: 320 CFQKMSEQNGLQPDVITSINLL----PASAILEGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 95 SKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTF 154
+CG+ A + D+ E +V+ SW+++I+ YVQNG AL F ++ + + T
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVI-SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Query: 155 PSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA 214
S+L A + L+ GR++H V + + S+ + N+LV MYA CG L D+RK F I+
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
VVSWN++ Y F +V LF EM+ + PN+ + + +L AC+
Sbjct: 495 KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 196 YAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSL 255
+A + D+ +LF + WN + + +EAV + MV G++ + F+
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 256 SIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH 315
++ + AG+ + D + N+L+ +Y K G +A VFEE+
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 316 PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQL 375
DIVSWN++I+G + +L L EM G P+ F+ SAL AC+ V +G+++
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 376 HSCLIKIDTDS-DFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
H ++ ++ D V ++DMYSK +S A R++ M +++I+
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIV 299
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 177/372 (47%), Gaps = 11/372 (2%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+S+T +++ C S + L + D + N +V Y + G+ A KL Q
Sbjct: 129 VSWTAMVNGCFRSGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQFGKVDDALKLFKQ 184
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+V+ SW+ +I G QN EAL F +M +K F V+ AC+ +M
Sbjct: 185 MPGKNVI-SWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHM 243
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G +VHG+ + GF + +V+ +L+ YA C ++GDSRK+F V V W AL S Y
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ +A+ +F M+R I PN+ + + LN+C+ L D F
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
N+LV MYS G + +AV+VF +I IVSWN++I GC QH WA + +M
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK 423
Query: 350 CPNVFTISSALKACAAVGFKDLGRQL----HSCLIKIDTDSDFFVAVGLIDMYSKCEMLS 405
P+ T + L AC+ GF + GR+L S + ID + ++D+ +C L
Sbjct: 424 EPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTC--MVDILGRCGKLK 481
Query: 406 DARRVYELMPKK 417
+A + E M K
Sbjct: 482 EAEELIERMVVK 493
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 154/295 (52%), Gaps = 9/295 (3%)
Query: 41 CFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF 100
C +S ++P +T +++ C + + +G+++H +I+ GF ++ L++ Y+ C R
Sbjct: 220 CIKSTSRP---FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRI 276
Query: 101 GYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA 160
G +RK+ D+ V V W+AL+SGY N ++AL F+ M + N+ TF S L +
Sbjct: 277 GDSRKVFDEKVHEQVAV-WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
CS L+ G+++HG++V G ++D FV N+LVVMY+ G + D+ +F I S+VSW
Sbjct: 336 CSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSW 395
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXXX 277
N++ Q A +F +M+R P+E + + +L+AC+ L G
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSS 455
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE-ITHPDIVSWNAVIAGCVQH 331
Q +VD+ + G+++ A + E + P+ + W A+++ C H
Sbjct: 456 GINHIDRKIQ-HYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMH 509
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 167/337 (49%), Gaps = 11/337 (3%)
Query: 85 SFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCM 144
S +++ Y++ R A L D+ DVV SW+++ISG V+ G A+ F++M
Sbjct: 67 SLYTKMITGYTRSNRLVDALNLFDEMPVRDVV-SWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLG 203
V ++ +++ C ++ ++ + M V D N++V Y + G++
Sbjct: 126 RSV----VSWTAMVNGCFRSGKVDQAERLFYQMPV-----KDTAAWNSMVHGYLQFGKVD 176
Query: 204 DSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
D+ KLF + +V+SW + Q++ EA+DLFK M+R I+ + ++ ACA
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 264 GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNA 323
+++ + +L+ Y+ RI ++ VF+E H + W A
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTA 296
Query: 324 VIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID 383
+++G ++ ++ AL++ + M + PN T +S L +C+A+G D G+++H +K+
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG 356
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
++D FV L+ MYS ++DA V+ + KK I+
Sbjct: 357 LETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIV 393
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 181/373 (48%), Gaps = 12/373 (3%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
Y LL+ C+ ++L G +HAH+I+ + R L+ Y KC ARK++D+
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
E +VV SW+A+IS Y Q G EAL F +M K NEFTF +VL +C L +G+
Sbjct: 115 EKNVV-SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGK 173
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
++HG+ V +DS FV ++L+ MYAK GQ+ ++R++F + VVS A+ + Y Q
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
EA+++F + G+ PN + + +L A +GL N
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC- 350
+L+DMYSK G + A +F+ + +SWNA++ G +H L L M+
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG------LIDMYSKCEML 404
P+ T+ + L C+ +D G + ++ ++ G ++DM + +
Sbjct: 354 PDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA----GEYGTKPGTEHYGCIVDMLGRAGRI 409
Query: 405 SDARRVYELMPKK 417
+A + MP K
Sbjct: 410 DEAFEFIKRMPSK 422
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 3/311 (0%)
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
S+ T+ V+ IS NG +EALL +M MLG + + ++L AC K+ L
Sbjct: 14 SSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRD 70
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G++VH + T + ++ L++ Y KC L D+RK+ + +VVSW A+ S Y Q
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ EA+ +F EM+R +PNEF+ + +L +C F
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
++L+DMY+K G+I+ A +FE + D+VS A+IAG Q ++ AL + + + S G
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
PN T +S L A + + D G+Q H +++ + + LIDMYSKC LS ARR
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 410 VYELMPKKDII 420
+++ MP++ I
Sbjct: 311 LFDNMPERTAI 321
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 172/383 (44%), Gaps = 36/383 (9%)
Query: 39 SQCFQSFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKC 97
++ +S KP ++ +L+ C+ + L LG ++H ++++ + + L+ +Y+K
Sbjct: 142 AEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA 201
Query: 98 GRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSV 157
G+ AR++ + E D VVS +A+I+GY Q G +EAL F+ + G+ N T+ S+
Sbjct: 202 GQIKEAREIFECLPERD-VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASL 260
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV 217
L A S L+ G++ H + + N+L+ MY+KCG L +R+LF ++ +
Sbjct: 261 LTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTA 320
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSIILNACAGLRNGSXXXXXXX 276
+SWNA+ Y + E ++LF+ M ++P+ +L +L+ C+ R
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR---------- 370
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW 336
M G I + + E T P + ++ + D
Sbjct: 371 -------------------MEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 337 ALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLID 396
A + M S P + S L AC D+G + LI+I+ ++ + L +
Sbjct: 412 AFEFIKRMPSK---PTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVI-LSN 467
Query: 397 MYSKCEMLSDARRVYELMPKKDI 419
+Y+ +D V +M +K +
Sbjct: 468 LYASAGRWADVNNVRAMMMQKAV 490
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/371 (32%), Positives = 193/371 (52%), Gaps = 13/371 (3%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHD-PSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
L +C K G ++H ++R GF D P LV++Y+KCG A LV +E D
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRA-VLVFGGSERD 125
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
V ++ALISG+V NG +A+ + +M G+ +++TFPS+LK S +L+ +KVH
Sbjct: 126 VF-GYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVH 183
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV-APSVVSWNALFSCYVQSDFC 233
G++ GFDSD +V + LV Y+K + D++K+F + V WNAL + Y Q
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
+A+ +F +M G+ + +++ +L+A + D +NAL
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 294 VDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHEC--NDWALALLNEMKSSGACP 351
+DMY K +E A ++FE + D+ +WN+V+ CV C +D LAL M SG P
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVL--CVHDYCGDHDGTLALFERMLCSGIRP 361
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKID----TDSDFFVAVGLIDMYSKCEMLSDA 407
++ T+++ L C + GR++H +I S+ F+ L+DMY KC L DA
Sbjct: 362 DIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDA 421
Query: 408 RRVYELMPKKD 418
R V++ M KD
Sbjct: 422 RMVFDSMRVKD 432
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 179/360 (49%), Gaps = 18/360 (5%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
++H + GF D + LV+ YSK A+K+ D+ + D V W+AL++GY Q
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
++ALL F+ M GV + T SVL A ++ D++ GR +HG++V TG SD V+
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVE---AVDLFKEMVRG 246
N L+ MY K L ++ +F ++ + +WN++ + D+C + + LF+ M+
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVH---DYCGDHDGTLALFERMLCS 357
Query: 247 GIRPNEFSLSIILNAC---AGLRNG-SXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
GIRP+ +L+ +L C A LR G ++F N+L+DMY K G
Sbjct: 358 GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
+ +A VF+ + D SWN +I G C + AL + + M +G P+ T L+A
Sbjct: 418 LRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 363 CAAVGFKDLGRQL---HSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
C+ GF + GR + I SD + V IDM + + L +A YEL K I
Sbjct: 478 CSHSGFLNEGRNFLAQMETVYNILPTSDHYACV--IDMLGRADKLEEA---YELAISKPI 532
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 135/266 (50%), Gaps = 4/266 (1%)
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANT-LVVMYAKCGQLGDSRKLFGSIVA 214
+ L+ C+ +KD G+++HG V GF D A T LV MYAKCG + + +FG
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
V +NAL S +V + ++A++ ++EM GI P++++ +L + S
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMEL-SDVKKV 182
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHEC 333
D + + LV YSK +E+A VF+E+ D V WNA++ G Q
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
+ AL + ++M+ G + TI+S L A G D GR +H +K + SD V+
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 394 LIDMYSKCEMLSDARRVYELMPKKDI 419
LIDMY K + L +A ++E M ++D+
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDL 328
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 183/370 (49%), Gaps = 8/370 (2%)
Query: 51 SYTNLLSQCVASKSLTL-GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
S+ +L C AS SL + G +LH H+ + G +P L+S+Y KCG ARK+ ++
Sbjct: 55 SFPFILKSC-ASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEE 113
Query: 110 STET-DVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+ ++ + V ++ALISGY N +A F M GV + T ++ C++ + L
Sbjct: 114 NPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLW 173
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
+GR +HG V G DS+ V N+ + MY KCG + R+LF + +++WNA+ S Y
Sbjct: 174 LGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYS 233
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
Q+ + ++L+++M G+ P+ F+L +L++CA L + F
Sbjct: 234 QNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVF 293
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
+NA + MY++ G + A AVF+ + +VSW A+I H + L L ++M G
Sbjct: 294 VSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG 353
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEMLS 405
P+ L AC+ G D G +L + K++ + + L+D+ + L
Sbjct: 354 IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC--LVDLLGRAGRLD 411
Query: 406 DARRVYELMP 415
+A E MP
Sbjct: 412 EAMEFIESMP 421
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 7/292 (2%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ L+ C + L LG LH ++ G + + N +++Y KCG R+L D+
Sbjct: 157 VTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+++W+A+ISGY QNG + L + M GV + FT SVL +C+ +
Sbjct: 217 -MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G +V + GF + FV+N + MYA+CG L +R +F + S+VSW A+ CY
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 335
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRN-GSXXXXXXXXXXXXXXXXD 286
+ LF +M++ GIRP+ ++L+AC +GL + G +
Sbjct: 336 HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDWA 337
+S LVD+ + GR++ A+ E + PD W A++ C H+ D A
Sbjct: 396 HYS--CLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMA 445
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 2/304 (0%)
Query: 119 WSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSV 178
W+ + E++ + M G + F+FP +LK+C+ G+++H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 179 VTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS--WNALFSCYVQSDFCVEA 236
G +++ FV L+ MY KCG + D+RK+F S +S +NAL S Y + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 237 VDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
+F+ M G+ + ++ ++ C + N+ + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 297 YSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTI 356
Y K G +E +F+E+ +++WNAVI+G Q+ L L +MKSSG CP+ FT+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 357 SSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPK 416
S L +CA +G K +G ++ + + FV+ I MY++C L+ AR V+++MP
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 417 KDII 420
K ++
Sbjct: 321 KSLV 324
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 2/212 (0%)
Query: 211 SIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSX 270
++ A + WN E++ L++ M+R G P+ FS IL +CA L
Sbjct: 12 AVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVS 71
Query: 271 XXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVS--WNAVIAGC 328
+ F AL+ MY K G + +A VFEE +S +NA+I+G
Sbjct: 72 GQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGY 131
Query: 329 VQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDF 388
+ A + MK +G + T+ + C + LGR LH +K DS+
Sbjct: 132 TANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV 191
Query: 389 FVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
V I MY KC + RR+++ MP K +I
Sbjct: 192 AVLNSFITMYMKCGSVEAGRRLFDEMPVKGLI 223
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 4/186 (2%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P + ++LS C + +G E+ + GF + N +S+Y++CG AR + D
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+VSW+A+I Y +G G+ L+ F+DM G++ + F VL ACS +
Sbjct: 317 -IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 169 MGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF-S 225
G ++ M + + LV + + G+L ++ + S+ V P W AL +
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 226 CYVQSD 231
C + +
Sbjct: 436 CKIHKN 441
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 191/406 (47%), Gaps = 41/406 (10%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S +LLS CV ++ G+++HAH I G + LV+ YS A+ +++ S
Sbjct: 45 SAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENS 104
Query: 111 TETDVV--VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
D++ + W+ LI+ Y +N +E + A+ M G++ + FT+PSVLKAC D+
Sbjct: 105 ---DILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVA 161
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
GR VHG V+ + S +V N L+ MY + +G +R+LF + VSWNA+ +CY
Sbjct: 162 FGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA 221
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC-------------AGLRN-------- 267
EA +LF +M G+ + + +II C + +RN
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPV 281
Query: 268 ------------GSXXXXXXXXXXXXXXXXDQFS--ANALVDMYSKGGRIENAVAVFEEI 313
G+ D N L+ MYSK + +A+ VF +
Sbjct: 282 AMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQT 341
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
+ +WN++I+G Q ++ A LL EM +G PN T++S L CA + G+
Sbjct: 342 EENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
Query: 374 QLHSCLIKIDTDSDF-FVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
+ H +++ D+ + L+D+Y+K + A++V +LM K+D
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRD 447
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 180/406 (44%), Gaps = 42/406 (10%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y ++L C + + G +H + + N L+S+Y + G AR+L D+
Sbjct: 146 TYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM 205
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFT----------------- 153
E D V SW+A+I+ Y G EA F+ M GV+ + T
Sbjct: 206 FERDAV-SWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGA 264
Query: 154 ---------FPSVL---------KACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM 195
FP+ L KACS+ + +G+++HG+++ + +D V NTL+ M
Sbjct: 265 LGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITM 324
Query: 196 YAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSL 255
Y+KC L + +F S+ +WN++ S Y Q + EA L +EM+ G +PN +L
Sbjct: 325 YSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITL 384
Query: 256 SIILNACAGLRNGSXXXXXXXXXXXXXXXXD-QFSANALVDMYSKGGRIENAVAVFEEIT 314
+ IL CA + N D N+LVD+Y+K G+I A V + ++
Sbjct: 385 ASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS 444
Query: 315 HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQ 374
D V++ ++I G ALAL EM SG P+ T+ + L AC+ G +
Sbjct: 445 KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGER 504
Query: 375 LH---SCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
L C I F ++D+Y + L+ A+ + MP K
Sbjct: 505 LFMKMQCEYGIRPCLQHFSC--MVDLYGRAGFLAKAKDIIHNMPYK 548
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 159/355 (44%), Gaps = 18/355 (5%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P++ L C ++ LG E+H I + + RN L+++YSKC +A +V
Sbjct: 280 PVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHAL-IVF 338
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+ TE + + +W+++ISGY Q +EA +M + G + N T S+L C+ +L
Sbjct: 339 RQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQ 398
Query: 169 MGRKVHGMSVVTG-FDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
G++ H + F + N+LV +YAK G++ ++++ + V++ +L Y
Sbjct: 399 HGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGY 458
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXXX 284
A+ LFKEM R GI+P+ ++ +L+AC+ + G
Sbjct: 459 GNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPC 518
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITH-PDIVSWNAVIAGCVQH---ECNDWALAL 340
FS +VD+Y + G + A + + + P +W ++ C H + WA
Sbjct: 519 LQHFS--CMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEK 576
Query: 341 LNEMKSSGA-----CPNVFTISSALKACAAVG--FKDLGRQLHSCLIKIDTDSDF 388
L EMK N++ + + A V +DLG + IDTDS F
Sbjct: 577 LLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGF 631
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 128/325 (39%), Gaps = 39/325 (12%)
Query: 125 GYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
G++ + F +LL + + S+L AC + G +VH + +G +
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEY 76
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLF--GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
+ LV Y+ +++ + I+ P + WN L + Y +++ E + +K
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHP--LPWNVLIASYAKNELFEEVIAAYKR 134
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
MV GIRP+ F+ +L AC + + + NAL+ MY +
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 303 IENAVAVFEEITHPDIVSWNAVI-----------------------------------AG 327
+ A +F+ + D VSWNAVI G
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGG 254
Query: 328 CVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSD 387
C+Q AL L++ M++ + + LKAC+ +G LG+++H I D
Sbjct: 255 CLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGI 314
Query: 388 FFVAVGLIDMYSKCEMLSDARRVYE 412
V LI MYSKC+ L A V+
Sbjct: 315 DNVRNTLITMYSKCKDLRHALIVFR 339
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 293 LVDMYSKGGRIENAVAVFE--EITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
LV YS A ++ E +I HP + WN +IA ++E + +A M S G
Sbjct: 84 LVTFYSAFNLHNEAQSIIENSDILHP--LPWNVLIASYAKNELFEEVIAAYKRMVSKGIR 141
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
P+ FT S LKAC GR +H + S +V LI MY + + ARR+
Sbjct: 142 PDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRL 201
Query: 411 YELMPKKDII 420
++ M ++D +
Sbjct: 202 FDRMFERDAV 211
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 179/363 (49%), Gaps = 2/363 (0%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTET 113
+L C + ++ H +IR D + N L++ YSKCG AR++ D E
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 114 DVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
+V SW+ +I Y +N EAL F +M G K +EFT SVL AC + D +K+
Sbjct: 126 SLV-SWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFC 233
H +SV T D + +V L+ +YAKCG + D+ ++F S+ S V+W+++ + YVQ+
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
EA+ L++ R + N+F+LS ++ AC+ L + F A++
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 294 VDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNV 353
VDMY+K G + + +F E+ ++ WN +I+G +H + L +M+ G PN
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 354 FTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYE 412
T SS L C G + GR+ + S V ++D+ + +LS+A + +
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 413 LMP 415
+P
Sbjct: 425 SIP 427
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 145/278 (52%), Gaps = 4/278 (1%)
Query: 146 GVKCNEFT----FPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ 201
G NEF+ +L+ C+ + + HG + + D + N L+ Y+KCG
Sbjct: 52 GRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGF 111
Query: 202 LGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA 261
+ +R++F ++ S+VSWN + Y ++ EA+D+F EM G + +EF++S +L+A
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA 171
Query: 262 CAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSW 321
C + + + AL+D+Y+K G I++AV VFE + V+W
Sbjct: 172 CGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTW 231
Query: 322 NAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
++++AG VQ++ + AL L + N FT+SS + AC+ + G+Q+H+ + K
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 382 IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
S+ FVA +DMY+KC L ++ ++ + +K++
Sbjct: 292 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 329
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 126/243 (51%), Gaps = 7/243 (2%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
L+ LY+KCG A + V +S + V+WS++++GYVQN +EALL + + ++
Sbjct: 203 LLDLYAKCGMIKDAVQ-VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
N+FT SV+ ACS L G+++H + +GF S+ FVA++ V MYAKCG L +S +F
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 321
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GL-R 266
+ ++ WN + S + + E + LF++M + G+ PNE + S +L+ C GL
Sbjct: 322 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVE 381
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVI 325
G +S +VD+ + G + A + + I P W +++
Sbjct: 382 EGRRFFKLMRTTYGLSPNVVHYS--CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Query: 326 AGC 328
A C
Sbjct: 440 ASC 442
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 241 KEMVRGGIRPNEFS----LSIILNACAGLRNGSXXXXXX--XXXXXXXXXXDQFSANALV 294
+E V G NEFS + IL CA RNG+ D N L+
Sbjct: 46 QEEVSPGRYSNEFSNRNLVHEILQLCA--RNGAVMEAKACHGKIIRIDLEGDVTLLNVLI 103
Query: 295 DMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVF 354
+ YSK G +E A VF+ + +VSWN +I ++ AL + EM++ G + F
Sbjct: 104 NAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEF 163
Query: 355 TISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELM 414
TISS L AC ++LH +K D + +V L+D+Y+KC M+ DA +V+E M
Sbjct: 164 TISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 223
Query: 415 PKK 417
K
Sbjct: 224 QDK 226
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 187/353 (52%), Gaps = 2/353 (0%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G LH ++ G + N LV++Y K R AR++ D+ D V S++ +I GY+
Sbjct: 226 GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSV-SYNTMICGYL 284
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
+ +E++ F + + K + T SVL+AC +DL++ + ++ + GF +
Sbjct: 285 KLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
V N L+ +YAKCG + +R +F S+ VSWN++ S Y+QS +EA+ LFK M+
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
+ + + ++++ L + D +NAL+DMY+K G + +++
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
+F + D V+WN VI+ CV+ L + +M+ S P++ T L CA++
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 368 FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
K LG+++H CL++ +S+ + LI+MYSKC L ++ RV+E M ++D++
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV 576
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 185/379 (48%), Gaps = 6/379 (1%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
F ++ +++L C + L+L ++ ++++ GF + + RN L+ +Y+KCG
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
AR + + S E VSW+++ISGY+Q+G EA+ F M ++ + + T+ ++
Sbjct: 360 TARDVFN-SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWN 221
+ DL G+ +H + +G D V+N L+ MYAKCG++GDS K+F S+ V+WN
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
+ S V+ + + +M + + P+ + + L CA L
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALL 341
+ NAL++MYSK G +EN+ VFE ++ D+V+W +I + + AL
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETF 598
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMY 398
+M+ SG P+ + + AC+ G D G + KID + + V +D+
Sbjct: 599 ADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACV--VDLL 656
Query: 399 SKCEMLSDARRVYELMPKK 417
S+ + +S A + MP K
Sbjct: 657 SRSQKISKAEEFIQAMPIK 675
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 177/364 (48%), Gaps = 9/364 (2%)
Query: 61 ASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWS 120
+S +L +HA +I G F L+ YS + + + + V W+
Sbjct: 16 SSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWN 75
Query: 121 ALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVT 180
++I + +NG EAL + + V +++TFPSV+KAC+ D MG V+ +
Sbjct: 76 SIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM 135
Query: 181 GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLF 240
GF+SD FV N LV MY++ G L +R++F + +VSWN+L S Y + EA++++
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 241 KEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKG 300
E+ I P+ F++S +L A L N LV MY K
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 301 GRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALAL----LNEMKSSGACPNVFTI 356
R +A VF+E+ D VS+N +I G ++ E + ++ + L++ K P++ T+
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK-----PDLLTV 310
Query: 357 SSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPK 416
SS L+AC + L + +++ ++K + V LID+Y+KC + AR V+ M
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 417 KDII 420
KD +
Sbjct: 371 KDTV 374
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 180/374 (48%), Gaps = 4/374 (1%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P YT +++ C +G ++ ++ GF D N LV +YS+ G AR++
Sbjct: 104 PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
D+ D +VSW++LISGY +G+ +EAL ++++ + + FT SVL A
Sbjct: 164 FDEMPVRD-LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV 222
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
+ G+ +HG ++ +G +S V N LV MY K + D+R++F + VS+N +
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG 282
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
Y++ + E+V +F E + +P+ ++S +L AC LR+ S +
Sbjct: 283 YLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLE 341
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
N L+D+Y+K G + A VF + D VSWN++I+G +Q A+ L M
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSD 406
+ T + + G+ LHS IK D V+ LIDMY+KC + D
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGD 461
Query: 407 ARRVYELMPKKDII 420
+ +++ M D +
Sbjct: 462 SLKIFSSMGTGDTV 475
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 1/265 (0%)
Query: 155 PSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-V 213
P + +A S +LN R++H + + G DS F + L+ Y+ + S +F +
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXX 273
A +V WN++ + ++ EA++ + ++ + P++++ ++ ACAGL +
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHEC 333
D F NALVDMYS+ G + A VF+E+ D+VSWN++I+G H
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
+ AL + +E+K+S P+ FT+SS L A + G+ LH +K +S V G
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 394 LIDMYSKCEMLSDARRVYELMPKKD 418
L+ MY K +DARRV++ M +D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRD 272
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 126/282 (44%), Gaps = 5/282 (1%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I+Y L+S L G LH++ I+ G D S N L+ +Y+KCG G + K+
Sbjct: 409 ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF-S 467
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
S T V+W+ +IS V+ G L M V + TF L C+ +
Sbjct: 468 SMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRL 527
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G+++H + G++S+ + N L+ MY+KCG L +S ++F + VV+W + Y
Sbjct: 528 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGM 587
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXXXXXXXXXXXXDQ 287
+A++ F +M + GI P+ I+ AC +GL + +
Sbjct: 588 YGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIE 647
Query: 288 FSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGC 328
A +VD+ S+ +I A + + PD W +V+ C
Sbjct: 648 HYA-CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRAC 688
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 200/413 (48%), Gaps = 18/413 (4%)
Query: 12 NSLSFKPQTIHTTSRTIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMEL 71
N L P + TT+ T + ++++ S+C ++ P S N C L +
Sbjct: 6 NVLHLSPMVLATTTTT----KPSLLNQSKCTKA---TPSSLKN----CKTIDELKM---F 51
Query: 72 HAHLIRFGFSHDPSFRNHLVSLYSKCG---RFGYARKLVDQSTETDVVVSWSALISGYVQ 128
H L + G +D S LV+ + G +A+++ + S +++LI GY
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 129 NGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFV 188
+G EA+L F M G+ +++TFP L AC+ + G ++HG+ V G+ D FV
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG-G 247
N+LV YA+CG+L +RK+F + +VVSW ++ Y + DF +AVDLF MVR
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
+ PN ++ +++ACA L + + +ALVDMY K I+ A
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
+F+E ++ NA+ + V+ AL + N M SG P+ ++ SA+ +C+ +
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 368 FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
G+ H +++ +S + LIDMY KC A R+++ M K ++
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV 404
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 186/397 (46%), Gaps = 34/397 (8%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV 115
LS C S++ G+++H +++ G++ D +N LV Y++CG ARK+ D+ +E +V
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCM-LGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
V SW+++I GY + F K+A+ F M V N T V+ AC+ +DL G KV+
Sbjct: 201 V-SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV 234
+G + + + + LV MY KC + +++LF A ++ NA+ S YV+
Sbjct: 260 AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
EA+ +F M+ G+RP+ S+ +++C+ LRN NAL+
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 295 DMYSK-------------------------------GGRIENAVAVFEEITHPDIVSWNA 323
DMY K G ++ A FE + +IVSWN
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 324 VIAGCVQHECNDWALALLNEMKS-SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKI 382
+I+G VQ + A+ + M+S G + T+ S AC +G DL + ++ + K
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 383 DTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
D + L+DM+S+C A ++ + +D+
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 182/406 (44%), Gaps = 34/406 (8%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ T ++ ++S C + L G +++A + G + + LV +Y KC
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A++L D+ +++ + +A+ S YV+ G +EAL FN M GV+ + + S + +CS
Sbjct: 290 AKRLFDEYGASNLDLC-NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC----------------------- 199
+++ G+ HG + GF+S + N L+ MY KC
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 200 --------GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM-VRGGIRP 250
G++ + + F ++ ++VSWN + S VQ EA+++F M + G+
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
+ ++ I +AC L D LVDM+S+ G E+A+++F
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 311 EEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD 370
+T+ D+ +W A I + A+ L ++M G P+ AL AC+ G
Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQ 588
Query: 371 LGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYELMP 415
G+++ ++K+ S V G ++D+ + +L +A ++ E MP
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 131/313 (41%), Gaps = 35/313 (11%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
IS + +S C +++ G H +++R GF + N L+ +Y KC R A ++ D+
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 110 STETDVV------------------------------VSWSALISGYVQNGFGKEALLAF 139
+ VV VSW+ +ISG VQ +EA+ F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 140 NDM-CMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAK 198
M GV + T S+ AC L++ + ++ G D + TLV M+++
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 199 CGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSII 258
CG + +F S+ V +W A + A++LF +M+ G++P+ +
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 259 LNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-H 315
L AC+ GL D +VD+ + G +E AV + E++
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPED-VHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 316 PDIVSWNAVIAGC 328
P+ V WN+++A C
Sbjct: 637 PNDVIWNSLLAAC 649
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 4/244 (1%)
Query: 27 TIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSF 86
++ + V + Q + ++ ++ S C +L L ++ ++ + G D
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 87 RNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
LV ++S+CG A + + T D V +W+A I G + A+ F+DM G
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRD-VSAWTAAIGAMAMAGNAERAIELFDDMIEQG 566
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS 205
+K + F L ACS + G+++ + M + G + +V + + G L ++
Sbjct: 567 LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEA 626
Query: 206 RKLFGSI-VAPSVVSWNALF-SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
+L + + P+ V WN+L +C VQ + + A K V R + L + A A
Sbjct: 627 VQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASA 686
Query: 264 GLRN 267
G N
Sbjct: 687 GRWN 690
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 200/413 (48%), Gaps = 18/413 (4%)
Query: 12 NSLSFKPQTIHTTSRTIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMEL 71
N L P + TT+ T + ++++ S+C ++ P S N C L +
Sbjct: 6 NVLHLSPMVLATTTTT----KPSLLNQSKCTKA---TPSSLKN----CKTIDELKM---F 51
Query: 72 HAHLIRFGFSHDPSFRNHLVSLYSKCG---RFGYARKLVDQSTETDVVVSWSALISGYVQ 128
H L + G +D S LV+ + G +A+++ + S +++LI GY
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 129 NGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFV 188
+G EA+L F M G+ +++TFP L AC+ + G ++HG+ V G+ D FV
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG-G 247
N+LV YA+CG+L +RK+F + +VVSW ++ Y + DF +AVDLF MVR
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
+ PN ++ +++ACA L + + +ALVDMY K I+ A
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
+F+E ++ NA+ + V+ AL + N M SG P+ ++ SA+ +C+ +
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 368 FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
G+ H +++ +S + LIDMY KC A R+++ M K ++
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV 404
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 186/413 (45%), Gaps = 36/413 (8%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ T ++ ++S C + L G +++A + G + + LV +Y KC
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A++L D+ +++ + +A+ S YV+ G +EAL FN M GV+ + + S + +CS
Sbjct: 290 AKRLFDEYGASNLDLC-NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS 348
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC----------------------- 199
+++ G+ HG + GF+S + N L+ MY KC
Sbjct: 349 QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS 408
Query: 200 --------GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM-VRGGIRP 250
G++ + + F ++ ++VSWN + S VQ EA+++F M + G+
Sbjct: 409 IVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA 468
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
+ ++ I +AC L D LVDM+S+ G E+A+++F
Sbjct: 469 DGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 311 EEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD 370
+T+ D+ +W A I + A+ L ++M G P+ AL AC+ G
Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQ 588
Query: 371 LGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYELMPKK--DII 420
G+++ ++K+ S V G ++D+ + +L +A ++ E MP + D+I
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 131/313 (41%), Gaps = 35/313 (11%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
IS + +S C +++ G H +++R GF + N L+ +Y KC R A ++ D+
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 110 STETDVV------------------------------VSWSALISGYVQNGFGKEALLAF 139
+ VV VSW+ +ISG VQ +EA+ F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 140 NDM-CMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAK 198
M GV + T S+ AC L++ + ++ G D + TLV M+++
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 199 CGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSII 258
CG + +F S+ V +W A + A++LF +M+ G++P+ +
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 259 LNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-H 315
L AC+ GL D +VD+ + G +E AV + E++
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPED-VHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 316 PDIVSWNAVIAGC 328
P+ V WN+++A C
Sbjct: 637 PNDVIWNSLLAAC 649
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 4/244 (1%)
Query: 27 TIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSF 86
++ + V + Q + ++ ++ S C +L L ++ ++ + G D
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 87 RNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
LV ++S+CG A + + T D V +W+A I G + A+ F+DM G
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRD-VSAWTAAIGAMAMAGNAERAIELFDDMIEQG 566
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS 205
+K + F L ACS + G+++ + M + G + +V + + G L ++
Sbjct: 567 LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEA 626
Query: 206 RKLFGSI-VAPSVVSWNALF-SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
+L + + P+ V WN+L +C VQ + + A K V R + L + A A
Sbjct: 627 VQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASA 686
Query: 264 GLRN 267
G N
Sbjct: 687 GRWN 690
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 181/356 (50%), Gaps = 5/356 (1%)
Query: 67 LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
LG +H +++ G+ D + LV +Y+K F + ++ D+ E DV SW+ +IS +
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVA-SWNTVISCF 183
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
Q+G ++AL F M G + N + + ACS L G+++H V GF+ D
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
+V + LV MY KC L +R++F + S+V+WN++ YV V++ M+
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
G RP++ +L+ IL AC+ RN D + +L+D+Y K G A
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA 363
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDW--ALALLNEMKSSGACPNVFTISSALKACA 364
VF + SWN +I+ + +W A+ + ++M S G P+V T +S L AC+
Sbjct: 364 ETVFSKTQKDVAESWNVMISSYIS--VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS 421
Query: 365 AVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ + G+Q+H + + ++D + L+DMYSKC +A R++ +PKKD++
Sbjct: 422 QLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV 477
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 187/370 (50%), Gaps = 7/370 (1%)
Query: 54 NLLSQCV-ASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ-ST 111
+LL +C ++KSL +H ++ G D L+++Y C AR + +
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDM--CMLGVKCNEFTFPSVLKACSIKKDLNM 169
+DV + W++L+SGY +N + L F + C + V + FTFP+V+KA +
Sbjct: 68 RSDVYI-WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVP-DSFTFPNVIKAYGALGREFL 125
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
GR +H + V +G+ D VA++LV MYAK +S ++F + V SWN + SC+ Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
S +A++LF M G PN SL++ ++AC+ L D++
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
+ALVDMY K +E A VF+++ +V+WN++I G V + + +LN M G
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
P+ T++S L AC+ G+ +H +I+ ++D +V LID+Y KC + A
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 410 VYELMPKKDI 419
V+ +KD+
Sbjct: 366 VFS-KTQKDV 374
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 159/333 (47%), Gaps = 1/333 (0%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F +S T +S C L G E+H ++ GF D + LV +Y KC AR
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
+ V Q +V+W+++I GYV G K + N M + G + ++ T S+L ACS
Sbjct: 264 E-VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
++L G+ +HG + + ++D +V +L+ +Y KCG+ + +F SWN +
Sbjct: 323 RNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMI 382
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
S Y+ +AV+++ +MV G++P+ + + +L AC+ L
Sbjct: 383 SSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLE 442
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
D+ +AL+DMYSK G + A +F I D+VSW +I+ H AL +EM
Sbjct: 443 TDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHS 377
+ G P+ T+ + L AC G D G + S
Sbjct: 503 QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS 535
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 156 SVLKACS-IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-V 213
S+L+ C+ K L + VH + G D + +L+ +Y C +R +F + +
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI-RPNEFSLSIILNACAGLRNGSXXX 272
V WN+L S Y ++ + +++FK ++ I P+ F+ ++ A L
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 273 XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHE 332
D A++LV MY+K EN++ VF+E+ D+ SWN VI+ Q
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 333 CNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV 392
+ AL L M+SSG PN +++ A+ AC+ + + + G+++H +K + D +V
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 393 GLIDMYSKCEMLSDARRVYELMPKKDII 420
L+DMY KC+ L AR V++ MP+K ++
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLV 275
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 136/271 (50%), Gaps = 7/271 (2%)
Query: 46 TKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
T+P + T++L C S++L G +H ++IR + D L+ LY KCG A
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
+ + T+ DV SW+ +IS Y+ G +A+ ++ M +GVK + TF SVL ACS
Sbjct: 365 TVFSK-TQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
L G+++H + ++D + + L+ MY+KCG ++ ++F SI VVSW +
Sbjct: 424 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMI 483
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXX 281
S Y EA+ F EM + G++P+ +L +L+AC AGL G
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEE 312
+ +S ++D+ + GR+ A + ++
Sbjct: 544 EPIIEHYS--CMIDILGRAGRLLEAYEIIQQ 572
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 208/463 (44%), Gaps = 61/463 (13%)
Query: 18 PQTIHTTSRT---------IVDSQTNVVSNSQCFQSFTKPPI-------------SYTNL 55
P+ I TS+T + +S + +S+ Q +++F + S +L
Sbjct: 30 PRPISETSKTHDDESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASL 89
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV 115
LS CV G +LHAH I G D LV+ YS A+ + + S E
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENS-EILH 148
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
+ W+ LI Y++N +E++ + M G++ +EFT+PSV+KAC+ D GR VHG
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVE 235
V+ + +V N L+ MY + G++ +R+LF + VSWNA+ +CY + E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 236 AVDLFKEMVRGGIRPNEFSLSII-------------LNACAGLRN-----GSXXXXXXXX 277
A L M G+ + + + I LN G+RN GS
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 278 XXXXXXXXD-------------QFS------ANALVDMYSKGGRIENAVAVFEEITHPDI 318
FS N+L+ MYS+ + +A VF+++ +
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSC 378
+WN++I+G +E ++ LL EM SG PN T++S L A VG G++ H
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 379 LIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYELMPKKDII 420
+++ + D + L+DMY+K + A+RV++ M K+D +
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 176/407 (43%), Gaps = 46/407 (11%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y +++ C A G +H + + N L+S+Y + G+ AR+L D+
Sbjct: 186 TYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM 245
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSV------------- 157
+E D V SW+A+I+ Y EA + M + GV+ + T+ ++
Sbjct: 246 SERDAV-SWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGA 304
Query: 158 ----------------------LKACSIKKDLNMGRKVHGMSVVT-GFDSD-GFVANTLV 193
LKACS L G+ H + + + F D V N+L+
Sbjct: 305 LNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLI 364
Query: 194 VMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
MY++C L + +F + A S+ +WN++ S + ++ E L KEM+ G PN
Sbjct: 365 TMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHI 424
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD-QFSANALVDMYSKGGRIENAVAVFEE 312
+L+ IL A + N D N+LVDMY+K G I A VF+
Sbjct: 425 TLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 313 ITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
+ D V++ ++I G + + ALA +M SG P+ T+ + L AC+ +L
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS---HSNLV 541
Query: 373 RQLHSCLIKIDTDSDFFVAVG----LIDMYSKCEMLSDARRVYELMP 415
R+ H K++ + + ++D+Y + L AR ++ +P
Sbjct: 542 REGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 161/357 (45%), Gaps = 21/357 (5%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRF-GFSHD-PSFRNHLVSLYSKCGRFGYARKLV 107
++ N L C +L G H +IR FSHD + RN L+++YS+C +A +V
Sbjct: 321 VAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAF-IV 379
Query: 108 DQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL 167
Q E + + +W+++ISG+ N +E +M + G N T S+L + +L
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNL 439
Query: 168 NMGRKVHGMSVVTGFDSDGFVA-NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
G++ H + D + N+LV MYAK G++ ++++F S+ V++ +L
Sbjct: 440 QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG 499
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXX 283
Y + A+ FK+M R GI+P+ ++ +L+AC+ +R G
Sbjct: 500 YGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRL 559
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVFEEITH-PDIVSWNAVIAGCVQH---ECNDWAL- 338
+ +S +VD+Y + G ++ A +F I + P ++ C+ H +WA
Sbjct: 560 RLEHYS--CMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAAD 617
Query: 339 ALLNEMKSSG-----ACPNVFTISSALKACAAVG--FKDLGRQLHSCLIKIDTDSDF 388
LL E K +++ ++ + V DLG Q ++TDS+
Sbjct: 618 KLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 208/463 (44%), Gaps = 61/463 (13%)
Query: 18 PQTIHTTSRT---------IVDSQTNVVSNSQCFQSFTKPPI-------------SYTNL 55
P+ I TS+T + +S + +S+ Q +++F + S +L
Sbjct: 30 PRPISETSKTHDDESVPQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASL 89
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV 115
LS CV G +LHAH I G D LV+ YS A+ + + S E
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENS-EILH 148
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
+ W+ LI Y++N +E++ + M G++ +EFT+PSV+KAC+ D GR VHG
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVE 235
V+ + +V N L+ MY + G++ +R+LF + VSWNA+ +CY + E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 236 AVDLFKEMVRGGIRPNEFSLSII-------------LNACAGLRN-----GSXXXXXXXX 277
A L M G+ + + + I LN G+RN GS
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 278 XXXXXXXXD-------------QFS------ANALVDMYSKGGRIENAVAVFEEITHPDI 318
FS N+L+ MYS+ + +A VF+++ +
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSL 388
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSC 378
+WN++I+G +E ++ LL EM SG PN T++S L A VG G++ H
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 379 LIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYELMPKKDII 420
+++ + D + L+DMY+K + A+RV++ M K+D +
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV 491
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 176/407 (43%), Gaps = 46/407 (11%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y +++ C A G +H + + N L+S+Y + G+ AR+L D+
Sbjct: 186 TYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM 245
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSV------------- 157
+E D V SW+A+I+ Y EA + M + GV+ + T+ ++
Sbjct: 246 SERDAV-SWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGA 304
Query: 158 ----------------------LKACSIKKDLNMGRKVHGMSVVT-GFDSD-GFVANTLV 193
LKACS L G+ H + + + F D V N+L+
Sbjct: 305 LNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLI 364
Query: 194 VMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
MY++C L + +F + A S+ +WN++ S + ++ E L KEM+ G PN
Sbjct: 365 TMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHI 424
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD-QFSANALVDMYSKGGRIENAVAVFEE 312
+L+ IL A + N D N+LVDMY+K G I A VF+
Sbjct: 425 TLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 313 ITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
+ D V++ ++I G + + ALA +M SG P+ T+ + L AC+ +L
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS---HSNLV 541
Query: 373 RQLHSCLIKIDTDSDFFVAVG----LIDMYSKCEMLSDARRVYELMP 415
R+ H K++ + + ++D+Y + L AR ++ +P
Sbjct: 542 REGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 161/357 (45%), Gaps = 21/357 (5%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRF-GFSHD-PSFRNHLVSLYSKCGRFGYARKLV 107
++ N L C +L G H +IR FSHD + RN L+++YS+C +A +V
Sbjct: 321 VAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAF-IV 379
Query: 108 DQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL 167
Q E + + +W+++ISG+ N +E +M + G N T S+L + +L
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNL 439
Query: 168 NMGRKVHGMSVVTGFDSDGFVA-NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
G++ H + D + N+LV MYAK G++ ++++F S+ V++ +L
Sbjct: 440 QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG 499
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXX 283
Y + A+ FK+M R GI+P+ ++ +L+AC+ +R G
Sbjct: 500 YGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRL 559
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVFEEITH-PDIVSWNAVIAGCVQH---ECNDWAL- 338
+ +S +VD+Y + G ++ A +F I + P ++ C+ H +WA
Sbjct: 560 RLEHYS--CMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAAD 617
Query: 339 ALLNEMKSSG-----ACPNVFTISSALKACAAVG--FKDLGRQLHSCLIKIDTDSDF 388
LL E K +++ ++ + V DLG Q ++TDS+
Sbjct: 618 KLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 191/394 (48%), Gaps = 21/394 (5%)
Query: 39 SQCFQSFTKP-----PISYTNLLSQCVASKSLTLGMELHAHLIR-FGFSHDPSFRNHLVS 92
S F+ KP P++ L C + + G +H + + D + L+
Sbjct: 49 SHMFRDEEKPDNFTLPVA----LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIY 104
Query: 93 LYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VKCNE 151
+Y KCGR A ++ D+ + D+V +WS+++SG+ +NG +A+ F M M V +
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIV-TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDR 163
Query: 152 FTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGS 211
T +++ AC+ + +GR VHG + GF +D + N+L+ YAK ++ LF
Sbjct: 164 VTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKM 223
Query: 212 IVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXX 271
I V+SW+ + +CYVQ+ EA+ +F +M+ G PN ++ +L ACA +
Sbjct: 224 IAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAG---- 327
+ + ALVDMY K E A AVF I D+VSW A+I+G
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 343
Query: 328 -CVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDS 386
++++ LL + P+ + L +C+ +GF + + HS +IK DS
Sbjct: 344 GMAHRSIEEFSIMLLE----NNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 387 DFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ F+ L+++YS+C L +A +V+ + KD +
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTV 433
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 177/375 (47%), Gaps = 8/375 (2%)
Query: 46 TKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
T ++ L+S C + LG +H +IR GFS+D S N L++ Y+K F A
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 219
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
L E DV+ SWS +I+ YVQNG EALL FNDM G + N T VL+AC+
Sbjct: 220 LFKMIAEKDVI-SWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAH 278
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
DL GRK H +++ G +++ V+ LV MY KC ++ +F I VVSW AL S
Sbjct: 279 DLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALIS 338
Query: 226 CYVQSDFCVEAVDLFKEM-VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
+ + +++ F M + RP+ + +L +C+ L
Sbjct: 339 GFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD 398
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+ F +LV++YS+ G + NA VF I D V W ++I G H AL N M
Sbjct: 399 SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM 458
Query: 345 -KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI---KIDTDSDFFVAVGLIDMYSK 400
KSS PN T S L AC+ G G ++ ++ ++ + + + L+D+ +
Sbjct: 459 VKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAV--LVDLLGR 516
Query: 401 CEMLSDARRVYELMP 415
L A + + MP
Sbjct: 517 VGDLDTAIEITKRMP 531
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 167/322 (51%), Gaps = 7/322 (2%)
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
AR++ + T+ + W+ L+ + +E L F+ M K + FT P LKAC
Sbjct: 13 ARQMFGEMTKRSLY-QWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 163 IKKDLNMGRKVHGM---SVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS 219
+++N G +HG V G SD +V ++L+ MY KCG++ ++ ++F + P +V+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGG-IRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
W+++ S + ++ +AV+ F+ MV + P+ +L +++AC L N
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL 338
D N+L++ Y+K + AV +F+ I D++SW+ VIA VQ+ AL
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMY 398
+ N+M G PNV T+ L+ACAA + GR+ H I+ +++ V+ L+DMY
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 399 SKCEMLSDARRVYELMPKKDII 420
KC +A V+ +P+KD++
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVV 331
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 204 DSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
D+R++FG + S+ WN L + E + F M R +P+ F+L + L AC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 264 GLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWN 322
LR D + ++L+ MY K GR+ A+ +F+E+ PDIV+W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 323 AVIAGCVQHECNDWALALLNEM-KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
++++G ++ A+ M +S P+ T+ + + AC + LGR +H +I+
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 382 IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+D + L++ Y+K +A +++++ +KD+I
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVI 230
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 188/375 (50%), Gaps = 11/375 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y ++L C L GM++H + + + + R+ L+SLY++CG+ AR D
Sbjct: 115 TYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSM 174
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
E D+V SW+A+I GY N + F M G K + FTF S+L+A + K L +
Sbjct: 175 KERDLV-SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIV 233
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
++HG+++ GF + +LV Y KCG L ++ KL ++S AL + + Q
Sbjct: 234 SELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQ 293
Query: 231 DFCV-EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX-DQF 288
+ C +A D+FK+M+R + +E +S +L C + + + D
Sbjct: 294 NNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVA 353
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
N+L+DMY+K G IE+AV FEE+ D+ SW ++IAG +H + A+ L N M+
Sbjct: 354 LGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER 413
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLS 405
PN T S L AC+ G +LG +++ +I I+ + + IDM ++ L
Sbjct: 414 IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCI--IDMLARSGYLE 471
Query: 406 DARRVYELMPKKDII 420
+A Y L+ K+ I
Sbjct: 472 EA---YALIRSKEGI 483
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 183/380 (48%), Gaps = 5/380 (1%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+++ P Y L C + +H + I GF + ++ L+ LY K G +
Sbjct: 6 ENYLLSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKH 65
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
ARKL D+ ++ DVV SW+A+IS + + G+ +ALL F +M VK N+FT+ SVLK+C
Sbjct: 66 ARKLFDRISKRDVV-SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCK 124
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
L G ++HG + V + L+ +YA+CG++ ++R F S+ +VSWNA
Sbjct: 125 DLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNA 184
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
+ Y + + LF+ M+ G +P+ F+ +L A ++
Sbjct: 185 MIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLG 244
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAG-CVQHECNDWALALL 341
+LV+ Y K G + NA + E D++S A+I G Q+ C A +
Sbjct: 245 FGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIF 304
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG--LIDMYS 399
+M + +SS LK C + +GRQ+H +K + F VA+G LIDMY+
Sbjct: 305 KDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALK-SSQIRFDVALGNSLIDMYA 363
Query: 400 KCEMLSDARRVYELMPKKDI 419
K + DA +E M +KD+
Sbjct: 364 KSGEIEDAVLAFEEMKEKDV 383
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 10/284 (3%)
Query: 144 MLGVKCNEFTFPSV----LKACS---IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMY 196
ML V N PS+ LK CS +KK L + +HG S+ GF S+ + + L+ +Y
Sbjct: 1 MLVVSENYLLSPSLYLKALKLCSYQNVKKQLLL---IHGNSITNGFCSNLQLKDMLIDLY 57
Query: 197 AKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
K G + +RKLF I VVSW A+ S + + + +A+ LFKEM R ++ N+F+
Sbjct: 58 LKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYG 117
Query: 257 IILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP 316
+L +C L + +AL+ +Y++ G++E A F+ +
Sbjct: 118 SVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER 177
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLH 376
D+VSWNA+I G + C D + +L M + G P+ FT S L+A V ++ +LH
Sbjct: 178 DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELH 237
Query: 377 SCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
IK+ + L++ Y KC L++A +++E K+D++
Sbjct: 238 GLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLL 281
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 183/399 (45%), Gaps = 31/399 (7%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S+ +L K L + +LH + G + S N L+S Y KCG A ++ +
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA 276
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
D+V SW+A+I ++ +AL F M G N+ T+ SVL S+ + L+ G
Sbjct: 277 GSWDIV-SWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG 335
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
R++HGM + G ++ + N L+ YAKCG L DSR F I ++V WNAL S Y
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK 395
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC----------AGLRNGSXXXXXXXXXXX 280
D + + LF +M++ G RP E++ S L +C +R G
Sbjct: 396 DGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLM 454
Query: 281 XXXXXDQFSANALV------------------DMYSKGGRIENAVAVFEEITHPDIVSWN 322
+Q +AL+ +YS+ G+ +V + + PD VSWN
Sbjct: 455 RSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWN 514
Query: 323 AVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKI 382
IA C + + ++ + L M S P+ +T S L C+ + LG +H + K
Sbjct: 515 IAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKT 574
Query: 383 D-TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
D + +D FV LIDMY KC + +V+E +K++I
Sbjct: 575 DFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLI 613
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 170/370 (45%), Gaps = 6/370 (1%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRF-GFSHDPSFR-NHLVSLYSKCGRFGYARKLVDQST 111
+LL+ C + S LHA I P + N+++SLY K G A K+ DQ
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
E + V S++ +I GY + G +A F++M G N+ T +L S+ D+ G
Sbjct: 77 ERNKV-SFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAGT 133
Query: 172 KVHGMSVVTG-FDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
++HG+S+ G F +D FV L+ +Y + L + ++F + S+ +WN + S
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
F E + F+E+VR G E S +L + +++ +
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
N+L+ Y K G A +F++ DIVSWNA+I + E AL L M G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
PN T S L + V GRQ+H LIK ++ + LID Y+KC L D+R
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 411 YELMPKKDII 420
++ + K+I+
Sbjct: 374 FDYIRDKNIV 383
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 186/401 (46%), Gaps = 18/401 (4%)
Query: 12 NSLSFKPQTIHTTSRTIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMEL 71
N +SF + VD V S + F P S + L C AS + G +L
Sbjct: 79 NKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL--PNQSTVSGLLSC-ASLDVRAGTQL 135
Query: 72 HAHLIRFG-FSHDPSFRNHLVSLYSKCGRFGYARKLVD----QSTETDVVVSWSALISGY 126
H +++G F D L+ LY + A ++ + +S ET W+ ++S
Sbjct: 136 HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLET-----WNHMMSLL 190
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
GF KE + F ++ +G E +F VLK S KDL++ +++H + G D +
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
V N+L+ Y KCG + ++F + +VSWNA+ +S+ ++A+ LF M
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
G PN+ + +L + ++ S NAL+D Y+K G +E++
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
F+ I +IV WNA+++G + L+L +M G P +T S+ALK+C
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVT 429
Query: 367 GFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
+ QLHS ++++ + + +V L+ Y+K ++++DA
Sbjct: 430 ELQ----QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDA 466
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 177/406 (43%), Gaps = 39/406 (9%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
F+ +Y ++L + L+ G ++H LI+ G N L+ Y+KCG
Sbjct: 310 HGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLED 369
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
+R D + ++V W+AL+SGY N G L F M +G + E+TF + LK+C
Sbjct: 370 SRLCFDYIRDKNIVC-WNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC 427
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC----------------------- 199
+ + +++H + V G++ + +V ++L+ YAK
Sbjct: 428 VTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLN 483
Query: 200 ---------GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
GQ +S KL ++ P VSWN + +SD+ E ++LFK M++ IRP
Sbjct: 484 IVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRP 543
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX-XDQFSANALVDMYSKGGRIENAVAV 309
++++ IL+ C+ L + + D F N L+DMY K G I + + V
Sbjct: 544 DKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKV 603
Query: 310 FEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK 369
FEE ++++W A+I+ H AL E S G P+ + S L AC G
Sbjct: 604 FEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMV 663
Query: 370 DLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
G L + + + +D+ ++ L +A + MP
Sbjct: 664 KEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 7/245 (2%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N + +YS+ G++ + KL+ + D V SW+ I+ ++ + +E + F M +
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLEQPDTV-SWNIAIAACSRSDYHEEVIELFKHMLQSNI 541
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD-SDGFVANTLVVMYAKCGQLGDSR 206
+ +++TF S+L CS DL +G +HG+ T F +D FV N L+ MY KCG +
Sbjct: 542 RPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVM 601
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AG 264
K+F ++++W AL SC + EA++ FKE + G +P+ S IL AC G
Sbjct: 602 KVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGG 661
Query: 265 LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP-DIVSWNA 323
+ D + VD+ ++ G ++ A + E+ P D W
Sbjct: 662 MVKEGMGLFQKMKDYGVEPEMDHY--RCAVDLLARNGYLKEAEHLIREMPFPADAPVWRT 719
Query: 324 VIAGC 328
+ GC
Sbjct: 720 FLDGC 724
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 42 FQSFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFR-NHLVSLYSKCGR 99
QS +P ++ ++LS C LTLG +H + + FS +F N L+ +Y KCG
Sbjct: 537 LQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGS 596
Query: 100 FGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLK 159
K+ +++ E + +++W+ALIS +G+G+EAL F + LG K + +F S+L
Sbjct: 597 IRSVMKVFEETREKN-LITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
Query: 160 ACS----IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP 215
AC +K+ + + +K+ V D V + A+ G L ++ L + P
Sbjct: 656 ACRHGGMVKEGMGLFQKMKDYGVEPEMDH----YRCAVDLLARNGYLKEAEHLIREMPFP 711
Query: 216 S 216
+
Sbjct: 712 A 712
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 174/356 (48%), Gaps = 10/356 (2%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
+LH + GF S N V+ YSK G A + E VSW+++I Y Q+
Sbjct: 159 QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQH 218
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
G +AL + +M G K + FT SVL A + L GR+ HG + GF + V
Sbjct: 219 KEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVG 278
Query: 190 NTLVVMYAKCG---QLGDSRKLFGSIVAPSVVSWNALFSCY-VQSDFCVEAVDLFKEMVR 245
+ L+ Y+KCG + DS K+F I++P +V WN + S Y + + EAV F++M R
Sbjct: 279 SGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQR 338
Query: 246 GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA-NALVDMYSKGGRIE 304
G RP++ S + +AC+ L + S ++ S NAL+ +Y K G ++
Sbjct: 339 IGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQ 398
Query: 305 NAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACA 364
+A VF+ + + VS+N +I G QH AL L M SG PN T + L ACA
Sbjct: 399 DARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACA 458
Query: 365 AVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
G D G++ + + KI+ +++ + +ID+ + L +A R + MP K
Sbjct: 459 HCGKVDEGQEYFNTMKETFKIEPEAEHYSC--MIDLLGRAGKLEEAERFIDAMPYK 512
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 185/403 (45%), Gaps = 40/403 (9%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR------ 104
++ +LL + VA + L G LHA ++ + NH V+LYSKCGR YAR
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 105 -------------------------KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAF 139
+L D+ + D V S++ LISGY A++ F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV-SYNTLISGYADARETFAAMVLF 128
Query: 140 NDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC 199
M LG + + FT ++ AC + DL +++H SV GFDS V N V Y+K
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 200 GQLGDSRKLF-GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSII 258
G L ++ +F G VSWN++ Y Q +A+ L+KEM+ G + + F+L+ +
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 259 LNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE---NAVAVFEEITH 315
LNA L + + + L+D YSK G + ++ VF+EI
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 316 PDIVSWNAVIAG-CVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQ 374
PD+V WN +I+G + E ++ A+ +M+ G P+ + AC+ + +Q
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 375 LHSCLIKIDTDSDFF-VAVGLIDMYSKCEMLSDARRVYELMPK 416
+H IK S+ V LI +Y K L DAR V++ MP+
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE 409
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 184/403 (45%), Gaps = 30/403 (7%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
F+ F + ++L+ + L G + H LI+ GF + + L+ YSKCG
Sbjct: 233 FKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCD 292
Query: 102 --YARKLVDQSTETDVVVSWSALISGYVQN-GFGKEALLAFNDMCMLGVKCNEFTFPSVL 158
Y + V Q + +V W+ +ISGY N +EA+ +F M +G + ++ +F V
Sbjct: 293 GMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352
Query: 159 KACSIKKDLNMGRKVHGMSVVTGFDSDGF-VANTLVVMYAKCGQLGDSRKLFGSIVAPSV 217
ACS + +++HG+++ + S+ V N L+ +Y K G L D+R +F + +
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNA 412
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA---GLRNGSXXXXX 274
VS+N + Y Q EA+ L++ M+ GI PN+ + +L+ACA + G
Sbjct: 413 VSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNT 472
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH-PDIVSWNAVIAGCVQHEC 333
+ +S ++D+ + G++E A + + + P V+W A++ C +H+
Sbjct: 473 MKETFKIEPEAEHYS--CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKN 530
Query: 334 NDWALALLNE---MKSSGACP-----NVFTISSALKACAAVGFKDLGRQLHS----CLIK 381
A NE M+ A P N++ + + A+V G+++ I+
Sbjct: 531 MALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIE 590
Query: 382 IDTDSDFFVA-------VGLIDMYSKCEMLSDARRVYELMPKK 417
+ FVA + ++ Y + EM+ ++V +M KK
Sbjct: 591 VKKKKHVFVAEDWSHPMIREVNEYLE-EMMKKMKKVGYVMDKK 632
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 139/305 (45%), Gaps = 41/305 (13%)
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLG--------- 203
TF +L ++DL G+ +H + V + S +++N V +Y+KCG+L
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 204 -----------------DS-----RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFK 241
DS R+LF I P VS+N L S Y + A+ LFK
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 242 EMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA--NALVDMYSK 299
M + G + F+LS ++ AC D +S+ NA V YSK
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACC----DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 300 GGRIENAVAVFEEITH-PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISS 358
GG + AV+VF + D VSWN++I QH+ ALAL EM G ++FT++S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 359 ALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSK---CEMLSDARRVYELMP 415
L A ++ GRQ H LIK + V GLID YSK C+ + D+ +V++ +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 416 KKDII 420
D++
Sbjct: 306 SPDLV 310
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 192/400 (48%), Gaps = 39/400 (9%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
Y + L C +++LT LHAH+++ G N LV++Y KCG +A ++ D+
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 112 ETDVVVSWSALISGYVQ-NGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
D + +W+++++ Q N GK + + G++ ++F F +++KAC+ ++ G
Sbjct: 66 HRDHI-AWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
R+VH +V+ + +D V ++LV MYAKCG L ++ +F SI + +SW A+ S Y +S
Sbjct: 125 RQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKS 184
Query: 231 DFCVEAVDLFKEM---------------VRGGIRPNEFS-----------------LSII 258
EA++LF+ + V+ G FS LS I
Sbjct: 185 GRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSI 244
Query: 259 LNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDI 318
+ ACA L F +NAL+DMY+K + A +F + H D+
Sbjct: 245 VGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDV 304
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSC 378
VSW ++I G QH + ALAL ++M S G PN T + AC+ VGF + GR+L
Sbjct: 305 VSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQS 364
Query: 379 LIK---IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+ K I + L+D+ + +L +A + MP
Sbjct: 365 MTKDYGIRPSLQHYTC--LLDLLGRSGLLDEAENLIHTMP 402
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 159/359 (44%), Gaps = 47/359 (13%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
++ L+ C S+ G ++H H I +++D ++ LV +Y+KCG A+ + D
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR 167
Query: 112 ETDVV------------------------------VSWSALISGYVQNGFGKEALLAFND 141
+ + SW+ALISG+VQ+G G EA F +
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 227
Query: 142 MCMLGVKC-NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCG 200
M V + S++ AC+ GR+VHG+ + GFDS F++N L+ MYAKC
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287
Query: 201 QLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
+ ++ +F + VVSW +L Q +A+ L+ +MV G++PNE + ++
Sbjct: 288 DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIY 347
Query: 261 ACAG---LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH-- 315
AC+ + G ++ L+D+ + G ++ A E + H
Sbjct: 348 ACSHVGFVEKGRELFQSMTKDYGIRPSLQHYT--CLLDLLGRSGLLDEA----ENLIHTM 401
Query: 316 ---PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC--PNVFTISSALKACAAVGFK 369
PD +W A+++ C + + + + + SS P+ + + S + A A++ K
Sbjct: 402 PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGK 460
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 33/296 (11%)
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV 217
L+ C+ + L + +H V G +ANTLV +Y KCG + ++F +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGG-IRPNEFSLSIILNACAGLRNGSXXXXXXX 276
++W ++ + Q++ + + +F + +RP++F S ++ ACA L +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW 336
D+ ++LVDMY+K G + +A AVF+ I + +SW A+++G + +
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 337 AL---------------ALLNEMKSSGACPNVFTI-----------------SSALKACA 364
AL AL++ SG F++ SS + ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 365 AVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ GRQ+H +I + DS F++ LIDMY+KC + A+ ++ M +D++
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P+ ++++ C + G ++H +I GF N L+ +Y+KC A+ +
Sbjct: 238 PLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFS 297
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+ D VVSW++LI G Q+G ++AL ++DM GVK NE TF ++ ACS +
Sbjct: 298 RMRHRD-VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVE 356
Query: 169 MGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALFS 225
GR++ M+ G L+ + + G L ++ L ++ P +W AL S
Sbjct: 357 KGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 188/415 (45%), Gaps = 18/415 (4%)
Query: 8 FSYINSLSFKPQTIHTTSRTIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTL 67
FSY LS + R + + VSN FT PP+ C +
Sbjct: 72 FSYNTLLS--SYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPV-----FKACGKFSGIRE 124
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G ++H + + GF D +N LV Y CG A K+ + DVV SW+ +I+G+
Sbjct: 125 GKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVV-SWTGIITGFT 183
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
+ G KEAL F+ M V+ N T+ VL + L++G+ +HG+ +
Sbjct: 184 RTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLE 240
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM-VRG 246
N L+ MY KC QL D+ ++FG + VSWN++ S V + EA+DLF M
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSS 300
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
GI+P+ L+ +L+ACA L D A+VDMY+K G IE A
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
+ +F I ++ +WNA++ G H +L EM G PN+ T +AL AC
Sbjct: 361 LEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHT 420
Query: 367 GFKDLGRQLHSCLIKIDTDSDFFVAVG----LIDMYSKCEMLSDARRVYELMPKK 417
G D GR+ + + + F + +ID+ + +L +A + + MP K
Sbjct: 421 GLVDEGRRYFHKM--KSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK 473
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 8/368 (2%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTET 113
L+S+C SL + ++ LI D N +V+ K F ++ S +
Sbjct: 11 ELISRC---SSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRS 67
Query: 114 DVV-VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK 172
+ S++ L+S Y + + A+ G + FTFP V KAC + G++
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDF 232
+HG+ GF D +V N+LV Y CG+ ++ K+FG + VVSW + + + ++
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGL 187
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
EA+D F +M + PN + +L + + S + NA
Sbjct: 188 YKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNA 244
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK-SSGACP 351
L+DMY K ++ +A+ VF E+ D VSWN++I+G V E + A+ L + M+ SSG P
Sbjct: 245 LIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
+ ++S L ACA++G D GR +H ++ D + ++DMY+KC + A ++
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 412 ELMPKKDI 419
+ K++
Sbjct: 365 NGIRSKNV 372
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 5/268 (1%)
Query: 65 LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALIS 124
L+LG +H +++ N L+ +Y KC + A ++ + + D V SW+++IS
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKV-SWNSMIS 278
Query: 125 GYVQNGFGKEALLAFNDM-CMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD 183
G V KEA+ F+ M G+K + SVL AC+ ++ GR VH + G
Sbjct: 279 GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
D + +V MYAKCG + + ++F I + +V +WNAL +E++ F+EM
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 244 VRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG 301
V+ G +PN + LNAC GL + ++D+ + G
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 302 RIENAVAVFEEI-THPDIVSWNAVIAGC 328
++ A+ + + + PD+ A+++ C
Sbjct: 459 LLDEALELVKAMPVKPDVRICGAILSAC 486
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 185/376 (49%), Gaps = 11/376 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL---- 106
S+T L C S++ G ++H +++ G +DP L+S+YSKCG G A +
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
VD+ E W+A+++ Y +N +G AL F M V + FT +V+ CS+
Sbjct: 334 VDKRLEI-----WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
N G+ VH S + + L+ +Y+KCG D+ +F S+ +V+W +L S
Sbjct: 389 YNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISG 448
Query: 227 YVQSDFCVEAVDLFKEMVRG--GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
++ EA+ +F +M ++P+ ++ + NACAGL
Sbjct: 449 LCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV 508
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+ F ++L+D+YSK G E A+ VF ++ ++V+WN++I+ ++ + ++ L N M
Sbjct: 509 LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM 568
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
S G P+ +I+S L A ++ G+ LH +++ SD + LIDMY KC
Sbjct: 569 LSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS 628
Query: 405 SDARRVYELMPKKDII 420
A +++ M K +I
Sbjct: 629 KYAENIFKKMQHKSLI 644
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 190/374 (50%), Gaps = 10/374 (2%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P S+T N++S C G +HA L + + + L++LYSKCG A L
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY-L 429
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCML--GVKCNEFTFPSVLKACSIK 164
V +S E +V+W +LISG +NG KEAL F DM +K + SV AC+
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
+ L G +VHG + TG + FV ++L+ +Y+KCG + K+F S+ ++V+WN++
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 549
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
SCY +++ ++DLF M+ GI P+ S++ +L A + +
Sbjct: 550 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP 609
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
D NAL+DMY K G + A +F+++ H +++WN +I G H AL+L +EM
Sbjct: 610 SDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM 669
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKC 401
K +G P+ T S + AC GF + G+ + + + I+ + + + ++D+ +
Sbjct: 670 KKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHY--ANMVDLLGRA 727
Query: 402 EMLSDARRVYELMP 415
+L +A + MP
Sbjct: 728 GLLEEAYSFIKAMP 741
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 191/417 (45%), Gaps = 14/417 (3%)
Query: 18 PQTIHTTSRTIVD-----SQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELH 72
P +I++ R ++ ++ S F ++ +LL C A +L+ G +H
Sbjct: 24 PASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 73 AHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVS------WSALISGY 126
++ G+ +DP LV++Y KCG YA ++ D +++ VS W+++I GY
Sbjct: 84 GSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM--GRKVHGMSVVTGFDS 184
+ KE + F M + GV+ + F+ V+ + + G+++HG + D+
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT 203
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPS-VVSWNALFSCYVQSDFCVEAVDLFKEM 243
D F+ L+ MY K G D+ ++F I S VV WN + + S C ++DL+
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLA 263
Query: 244 VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI 303
++ S + L AC+ N D + +L+ MYSK G +
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV 323
Query: 304 ENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
A VF + + WNA++A +++ AL L M+ P+ FT+S+ + C
Sbjct: 324 GEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC 383
Query: 364 AAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ +G + G+ +H+ L K S + L+ +YSKC DA V++ M +KD++
Sbjct: 384 SVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMV 440
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 177/359 (49%), Gaps = 10/359 (2%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G ++H ++R D + L+ +Y K G A ++ + + VV W+ +I G+
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 128 QNGFGKEALLAFNDMCMLG----VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD 183
+G + +L D+ ML VK +F L ACS ++ GR++H V G
Sbjct: 249 GSGICESSL----DLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
+D +V +L+ MY+KCG +G++ +F +V + WNA+ + Y ++D+ A+DLF M
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Query: 244 VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI 303
+ + P+ F+LS +++ C+ L + +AL+ +YSK G
Sbjct: 365 RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCD 424
Query: 304 ENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC--PNVFTISSALK 361
+A VF+ + D+V+W ++I+G ++ AL + +MK P+ ++S
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 362 ACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
ACA + G Q+H +IK + FV LID+YSKC + A +V+ M ++++
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV 543
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
Q +S T++L ++ SL G LH + +R G D +N L+ +Y KCG Y
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A + + + +++W+ +I GY +G AL F++M G ++ TF S++ AC+
Sbjct: 631 AENIF-KKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 163 IKKDLNMGRKV 173
+ G+ +
Sbjct: 690 HSGFVEEGKNI 700
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 181/373 (48%), Gaps = 12/373 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y L+ C SL+ + +H H++ G DP L+ +YS G YARK+ D++
Sbjct: 79 TYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK----D 166
+ + V W+AL G G+E L + M +GV+ + FT+ VLKAC +
Sbjct: 139 RKRTIYV-WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNH 197
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
L G+++H G+ S ++ TLV MYA+ G + + +FG + +VVSW+A+ +C
Sbjct: 198 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIAC 257
Query: 227 YVQSDFCVEAVDLFKEMVR--GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
Y ++ EA+ F+EM+R PN ++ +L ACA L
Sbjct: 258 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+ALV MY + G++E VF+ + D+VSWN++I+ H A+ + EM
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKC 401
++GA P T S L AC+ G + G++L + + I + + ++D+ +
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC--MVDLLGRA 435
Query: 402 EMLSDARRVYELM 414
L +A ++ + M
Sbjct: 436 NRLDEAAKMVQDM 448
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 15/292 (5%)
Query: 51 SYTNLLSQCVASK----SLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
+YT +L CVAS+ L G E+HAHL R G+S LV +Y++ G YA
Sbjct: 180 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYA-SY 238
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVK---CNEFTFPSVLKACSI 163
V VVSWSA+I+ Y +NG EAL F +M M K N T SVL+AC+
Sbjct: 239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM-MRETKDSSPNSVTMVSVLQACAS 297
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNAL 223
L G+ +HG + G DS V + LV MY +CG+L +++F + VVSWN+L
Sbjct: 298 LAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSL 357
Query: 224 FSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GL-RNGSXXXXXXXXXXX 280
S Y + +A+ +F+EM+ G P + +L AC+ GL G
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQH 331
+ ++ +VD+ + R++ A + +++ T P W +++ C H
Sbjct: 418 IKPQIEHYA--CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIH 467
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 12/277 (4%)
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
T+ ++ C + L+ +VH + G D D F+A L+ MY+ G + +RK+F
Sbjct: 79 TYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG-------L 265
++ WNALF + E + L+ +M R G+ + F+ + +L AC L
Sbjct: 139 RKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHL 198
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
G + LVDMY++ G ++ A VF + ++VSW+A+I
Sbjct: 199 MKGKEIHAHLTRRGYSSHV---YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMI 255
Query: 326 AGCVQHECNDWALALLNEM--KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID 383
A ++ AL EM ++ + PN T+ S L+ACA++ + G+ +H +++
Sbjct: 256 ACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRG 315
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
DS V L+ MY +C L +RV++ M +D++
Sbjct: 316 LDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 352
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 4/185 (2%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ ++L C + +L G +H +++R G + LV++Y +CG+ +++ D+
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ D VVSW++LIS Y +G+GK+A+ F +M G TF SVL ACS + +
Sbjct: 346 MHDRD-VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404
Query: 170 GRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF-SC 226
G+++ M G +V + + +L ++ K+ + P W +L SC
Sbjct: 405 GKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 227 YVQSD 231
+ +
Sbjct: 465 RIHGN 469
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 176/371 (47%), Gaps = 2/371 (0%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S + ++S C K +LG ++ +++ G + N L+S+ G YA + DQ
Sbjct: 162 SMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM 221
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+E D +SW+++ + Y QNG +E+ F+ M + N T ++L G
Sbjct: 222 SERD-TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 280
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
R +HG+ V GFDS V NTL+ MYA G+ ++ +F + ++SWN+L + +V
Sbjct: 281 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 340
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
++A+ L M+ G N + + L AC +Q
Sbjct: 341 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 400
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
NALV MY K G + + V ++ D+V+WNA+I G + E D ALA M+ G
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 351 PNVFTISSALKACAAVG-FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
N T+ S L AC G + G+ LH+ ++ +SD V LI MY+KC LS ++
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 410 VYELMPKKDII 420
++ + ++II
Sbjct: 521 LFNGLDNRNII 531
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 171/370 (46%), Gaps = 3/370 (0%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+++T+ L+ C G LH ++ G ++ N LVS+Y K G +R+++ Q
Sbjct: 363 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 422
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL-N 168
DVV +W+ALI GY ++ +AL AF M + GV N T SVL AC + DL
Sbjct: 423 MPRRDVV-AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G+ +H V GF+SD V N+L+ MYAKCG L S+ LF + ++++WNA+ +
Sbjct: 482 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 541
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
E + L +M G+ ++FS S L+A A L D F
Sbjct: 542 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 601
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
NA DMYSK G I V + + + SWN +I+ +H + A +EM G
Sbjct: 602 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 661
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIK-IDTDSDFFVAVGLIDMYSKCEMLSDA 407
P T S L AC+ G D G + + + + + +ID+ + L++A
Sbjct: 662 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 721
Query: 408 RRVYELMPKK 417
MP K
Sbjct: 722 ETFISKMPMK 731
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 174/351 (49%), Gaps = 9/351 (2%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G +H +++ GF N L+ +Y+ GR A LV + T ++SW++L++ +V
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA-NLVFKQMPTKDLISWNSLMASFV 338
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
+G +AL M G N TF S L AC GR +HG+ VV+G +
Sbjct: 339 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 398
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
+ N LV MY K G++ +SR++ + VV+WNAL Y + + +A+ F+ M G
Sbjct: 399 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 458
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX---XDQFSANALVDMYSKGGRIE 304
+ N ++ +L+AC L G D+ N+L+ MY+K G +
Sbjct: 459 VSSNYITVVSVLSAC--LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 516
Query: 305 NAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACA 364
++ +F + + +I++WNA++A H + L L+++M+S G + F+ S L A A
Sbjct: 517 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 576
Query: 365 AVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+ + G+QLH +K+ + D F+ DMYSKC + + V +++P
Sbjct: 577 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE---VVKMLP 624
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 179/369 (48%), Gaps = 2/369 (0%)
Query: 53 TNLLSQCVASKSL-TLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
+L++ C S S+ G+++H + + G D ++ LY G +RK+ ++
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
+ +VV SW++L+ GY G +E + + M GV CNE + V+ +C + KD ++GR
Sbjct: 122 DRNVV-SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
++ G V +G +S V N+L+ M G + + +F + +SWN++ + Y Q+
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
E+ +F M R N ++S +L+ + + N
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
L+ MY+ GR A VF+++ D++SWN+++A V + AL LL M SSG
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
N T +SAL AC F + GR LH ++ + + L+ MY K +S++RRV
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 412 ELMPKKDII 420
MP++D++
Sbjct: 421 LQMPRRDVV 429
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 161/329 (48%), Gaps = 2/329 (0%)
Query: 93 LYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEF 152
+Y+K GR AR L D + V SW+ ++SG V+ G E + F MC LG+K + F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEV-SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF 59
Query: 153 TFPSVLKACSIKKDL-NMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGS 211
S++ AC + G +VHG +G SD +V+ ++ +Y G + SRK+F
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 212 IVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXX 271
+ +VVSW +L Y E +D++K M G+ NE S+S+++++C L++ S
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH 331
N+L+ M G ++ A +F++++ D +SWN++ A Q+
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVA 391
+ + + + M+ N T+S+ L V + GR +H ++K+ DS V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 392 VGLIDMYSKCEMLSDARRVYELMPKKDII 420
L+ MY+ +A V++ MP KD+I
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLI 328
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 184/418 (44%), Gaps = 72/418 (17%)
Query: 69 MELHAHLIRFGFSHDPSFRNHLVSLYSKCGR----FGYARKLVDQSTETDV--------- 115
++ HA ++ G + S N LVS+YSKC ARK+ D+ E D
Sbjct: 169 VQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTG 228
Query: 116 ----------------------VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFT 153
+V+++A+ISGYV GF +EAL M G++ +EFT
Sbjct: 229 YVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFT 288
Query: 154 FPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV 213
+PSV++AC+ L +G++VH V+ D N+LV +Y KCG+ ++R +F +
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAY-VLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKE------------------------------- 242
A +VSWNAL S YV S EA +FKE
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
M R G P +++ S + +CA L + NAL+ MY+K G
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
+E A VF + D VSWNA+IA QH A+ + EM G P+ T+ + L A
Sbjct: 468 VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 363 CAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
C+ G D GR+ + +I +D + LID+ + SDA V E +P K
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHYAR--LIDLLCRSGKFSDAESVIESLPFK 583
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 159/319 (49%), Gaps = 45/319 (14%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIR---FGFSHDPSFRNHLVSLYSKCGRFGYARKLV 107
+Y +++ C + L LG ++HA+++R F F F N LVSLY KCG+F AR +
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH----FDNSLVSLYYKCGKFDEARAIF 343
Query: 108 DQSTETDVVVSWSALISGYV-------------------------------QNGFGKEAL 136
++ D+V SW+AL+SGYV +NGFG+E L
Sbjct: 344 EKMPAKDLV-SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 137 LAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMY 196
F+ M G + ++ F +K+C++ G++ H + GFDS N L+ MY
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 197 AKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
AKCG + ++R++F ++ VSWNAL + Q EAVD+++EM++ GIRP+ +L
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
Query: 257 IILNAC--AGLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
+L AC AGL + G D ++ L+D+ + G+ +A +V E +
Sbjct: 523 TVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA--RLIDLLCRSGKFSDAESVIESL 580
Query: 314 T-HPDIVSWNAVIAGCVQH 331
P W A+++GC H
Sbjct: 581 PFKPTAEIWEALLSGCRVH 599
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 188/455 (41%), Gaps = 107/455 (23%)
Query: 64 SLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVV------- 116
SL L +H ++I FGF N L+ +Y K YAR+L D+ +E D +
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 117 -------------------------VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNE 151
V ++A+I+G+ N G A+ F M G K +
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 152 FTFPSVLKACS-IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ----LGDSR 206
FTF SVL + + D + H ++ +G V+N LV +Y+KC L +R
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 207 KLFGSIVAPSVVSW--------------------------------NALFSCYVQSDFCV 234
K+F I+ SW NA+ S YV F
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXXXXDQFSAN 291
EA+++ + MV GI +EF+ ++ ACA L+ G D N
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----N 324
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCV---------------------- 329
+LV +Y K G+ + A A+FE++ D+VSWNA+++G V
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 330 ---------QHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI 380
++ + L L + MK G P + S A+K+CA +G G+Q H+ L+
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 381 KIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
KI DS LI MY+KC ++ +AR+V+ MP
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 131/327 (40%), Gaps = 71/327 (21%)
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPS------- 216
+ L + R VHG + GF + N L+ +Y K +L +R+LF I P
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTM 86
Query: 217 --------------------------VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
V +NA+ + + ++ A++LF +M G +P
Sbjct: 87 VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS-ANALVDMYSKGGR----IEN 305
+ F+ + +L A + + S +NALV +YSK + +
Sbjct: 147 DNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS 206
Query: 306 AVAVFEEITHPDIVSW--------------------------------NAVIAGCVQHEC 333
A VF+EI D SW NA+I+G V
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
AL ++ M SSG + FT S ++ACA G LG+Q+H+ +++ + D F
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNS 325
Query: 394 LIDMYSKCEMLSDARRVYELMPKKDII 420
L+ +Y KC +AR ++E MP KD++
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLV 352
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ F +++ + C + G + HA L++ GF S N L+++Y+KCG
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
AR++ D VSW+ALI+ Q+G G EA+ + +M G++ + T +VL ACS
Sbjct: 471 ARQVFRTMPCLD-SVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS 529
Query: 163 IKKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSW 220
++ GRK M V L+ + + G+ D+ + S+ P+ W
Sbjct: 530 HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIW 589
Query: 221 NALFS-CYVQSD 231
AL S C V +
Sbjct: 590 EALLSGCRVHGN 601
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 176/371 (47%), Gaps = 2/371 (0%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S + ++S C K +LG ++ +++ G + N L+S+ G YA + DQ
Sbjct: 145 SMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM 204
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+E D +SW+++ + Y QNG +E+ F+ M + N T ++L G
Sbjct: 205 SERD-TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 263
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
R +HG+ V GFDS V NTL+ MYA G+ ++ +F + ++SWN+L + +V
Sbjct: 264 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 323
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
++A+ L M+ G N + + L AC +Q
Sbjct: 324 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 383
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
NALV MY K G + + V ++ D+V+WNA+I G + E D ALA M+ G
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443
Query: 351 PNVFTISSALKACAAVG-FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
N T+ S L AC G + G+ LH+ ++ +SD V LI MY+KC LS ++
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 410 VYELMPKKDII 420
++ + ++II
Sbjct: 504 LFNGLDNRNII 514
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 171/370 (46%), Gaps = 3/370 (0%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+++T+ L+ C G LH ++ G ++ N LVS+Y K G +R+++ Q
Sbjct: 346 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 405
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL-N 168
DVV +W+ALI GY ++ +AL AF M + GV N T SVL AC + DL
Sbjct: 406 MPRRDVV-AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 464
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G+ +H V GF+SD V N+L+ MYAKCG L S+ LF + ++++WNA+ +
Sbjct: 465 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 524
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
E + L +M G+ ++FS S L+A A L D F
Sbjct: 525 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 584
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
NA DMYSK G I V + + + SWN +I+ +H + A +EM G
Sbjct: 585 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 644
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIK-IDTDSDFFVAVGLIDMYSKCEMLSDA 407
P T S L AC+ G D G + + + + + +ID+ + L++A
Sbjct: 645 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 704
Query: 408 RRVYELMPKK 417
MP K
Sbjct: 705 ETFISKMPMK 714
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 174/351 (49%), Gaps = 9/351 (2%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G +H +++ GF N L+ +Y+ GR A LV + T ++SW++L++ +V
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA-NLVFKQMPTKDLISWNSLMASFV 321
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
+G +AL M G N TF S L AC GR +HG+ VV+G +
Sbjct: 322 NDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQI 381
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
+ N LV MY K G++ +SR++ + VV+WNAL Y + + +A+ F+ M G
Sbjct: 382 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 441
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX---XDQFSANALVDMYSKGGRIE 304
+ N ++ +L+AC L G D+ N+L+ MY+K G +
Sbjct: 442 VSSNYITVVSVLSAC--LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 499
Query: 305 NAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACA 364
++ +F + + +I++WNA++A H + L L+++M+S G + F+ S L A A
Sbjct: 500 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 559
Query: 365 AVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+ + G+QLH +K+ + D F+ DMYSKC + + V +++P
Sbjct: 560 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE---VVKMLP 607
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 179/369 (48%), Gaps = 2/369 (0%)
Query: 53 TNLLSQCVASKSL-TLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
+L++ C S S+ G+++H + + G D ++ LY G +RK+ ++
Sbjct: 45 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 104
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
+ +VV SW++L+ GY G +E + + M GV CNE + V+ +C + KD ++GR
Sbjct: 105 DRNVV-SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 163
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
++ G V +G +S V N+L+ M G + + +F + +SWN++ + Y Q+
Sbjct: 164 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 223
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
E+ +F M R N ++S +L+ + + N
Sbjct: 224 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 283
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
L+ MY+ GR A VF+++ D++SWN+++A V + AL LL M SSG
Sbjct: 284 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 343
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
N T +SAL AC F + GR LH ++ + + L+ MY K +S++RRV
Sbjct: 344 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 412 ELMPKKDII 420
MP++D++
Sbjct: 404 LQMPRRDVV 412
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 150/305 (49%), Gaps = 1/305 (0%)
Query: 117 VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL-NMGRKVHG 175
VSW+ ++SG V+ G E + F MC LG+K + F S++ AC + G +VHG
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVE 235
+G SD +V+ ++ +Y G + SRK+F + +VVSW +L Y E
Sbjct: 67 FVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 236 AVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVD 295
+D++K M G+ NE S+S+++++C L++ S N+L+
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 296 MYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFT 355
M G ++ A +F++++ D +SWN++ A Q+ + + + + M+ N T
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 356 ISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+S+ L V + GR +H ++K+ DS V L+ MY+ +A V++ MP
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 416 KKDII 420
KD+I
Sbjct: 307 TKDLI 311
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 176/352 (50%), Gaps = 5/352 (1%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G +H + G + +++V +Y K R ARK+ D+ E D ++ W+ +ISGY
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL-WNTMISGYR 196
Query: 128 QNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
+N E++ F D+ + + T +L A + ++L +G ++H ++ TG S
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
+V + +Y+KCG++ LF P +V++NA+ Y + ++ LFKE++
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
G R +L ++ L + AL +YSK IE+A
Sbjct: 317 GARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
+F+E + SWNA+I+G Q+ + A++L EM+ S PN TI+ L ACA +
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 367 GFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
G LG+ +H + D +S +V+ LI MY+KC +++ARR+++LM KK+
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 6/328 (1%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFG-FSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
++L + L LGM++H+ + G +SHD +SLYSKCG+ L + +
Sbjct: 226 DILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG-FISLYSKCGKIKMGSALFREFRK 284
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK 172
D+V +++A+I GY NG + +L F ++ + G + T S++ + L +
Sbjct: 285 PDIV-AYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV---PVSGHLMLIYA 340
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDF 232
+HG + + F S V+ L +Y+K ++ +RKLF S+ SWNA+ S Y Q+
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
+A+ LF+EM + PN +++ IL+ACA L S + + A
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
L+ MY+K G I A +F+ +T + V+WN +I+G H AL + EM +SG P
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLI 380
T L AC+ G G ++ + +I
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 140/289 (48%), Gaps = 7/289 (2%)
Query: 53 TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
+ L+S S L L +H + ++ F S L ++YSK ARKL D+S E
Sbjct: 323 STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK 172
+ SW+A+ISGY QNG ++A+ F +M N T +L AC+ L++G+
Sbjct: 383 KSLP-SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDF 232
VH + T F+S +V+ L+ MYAKCG + ++R+LF + + V+WN + S Y
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQFS 289
EA+++F EM+ GI P + +L AC AGL + G ++
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 290 ANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWA 337
+VD+ + G ++ A+ E ++ P W ++ C H+ + A
Sbjct: 562 --CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 168/360 (46%), Gaps = 6/360 (1%)
Query: 62 SKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSA 121
S S++ + HA +I GF +D S L S G YAR + DV + ++
Sbjct: 30 STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFL-FNV 88
Query: 122 LISGYVQNGFGKEALLAFNDMCM-LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVT 180
L+ G+ N +L F + +K N T+ + A S +D GR +HG +VV
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 181 GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLF 240
G DS+ + + +V MY K ++ D+RK+F + + WN + S Y +++ VE++ +F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 241 KEMVRGG-IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
++++ R + +L IL A A L+ + + +YSK
Sbjct: 209 RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSK 268
Query: 300 GGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSA 359
G+I+ A+F E PDIV++NA+I G + + +L+L E+ SGA T+ S
Sbjct: 269 CGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSL 328
Query: 360 LKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+ G L +H +K + S V+ L +YSK + AR++++ P+K +
Sbjct: 329 VPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 2/251 (0%)
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
+ H ++ GF +D + L + G + +R +F S+ P V +N L + ++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 232 FCVEAVDLFKEMVRG-GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
++ +F + + ++PN + + ++A +G R+ +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM-KSSGA 349
+ +V MY K R+E+A VF+ + D + WN +I+G ++E ++ + ++ S
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
+ T+ L A A + LG Q+HS K S +V G I +YSKC +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 410 VYELMPKKDII 420
++ K DI+
Sbjct: 278 LFREFRKPDIV 288
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 4/190 (2%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F+ P++ T +LS C +L+LG +H + F L+ +Y+KCG AR
Sbjct: 416 FSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEAR 475
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
+L D T+ + V+W+ +ISGY +G G+EAL F +M G+ TF VL ACS
Sbjct: 476 RLFDLMTKKN-EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHA 534
Query: 165 KDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNA 222
+ G ++ + M GF+ +V + + G L + + ++ + P W
Sbjct: 535 GLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWET 594
Query: 223 LF-SCYVQSD 231
L +C + D
Sbjct: 595 LLGACRIHKD 604
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 186/373 (49%), Gaps = 5/373 (1%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+++ LL CV KSL G ++H H+ G + R LV +Y+ CG A+K+ D+S
Sbjct: 113 TFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDES 172
Query: 111 TETDVVVSWSALISGYVQNGFGK--EALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
T ++V SW+AL+ G V +G + + L F +M LGV N ++ +V K+ + L
Sbjct: 173 TSSNVY-SWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALR 231
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G K H +++ G + F+ +LV MY KCG++G +R++F IV +V W A+ +
Sbjct: 232 QGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLA 291
Query: 229 QSDFCVEAVDLFKEMV-RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
+ EA+ LF+ M+ I PN L+ IL ++ +Q
Sbjct: 292 HNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQ 351
Query: 288 -FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
F + L+D+Y K G + + VF + +SW A+++G + D AL + M+
Sbjct: 352 PFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ 411
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSD 406
G P+V TI++ L CA + G+++H +K + + L+ MYSKC +
Sbjct: 412 EGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEY 471
Query: 407 ARRVYELMPKKDI 419
R+++ + ++++
Sbjct: 472 PIRLFDRLEQRNV 484
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 168/360 (46%), Gaps = 5/360 (1%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S +N+ + +L G++ HA I+ G + + LV +Y KCG+ G AR++ D+
Sbjct: 216 SLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI 275
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMC-MLGVKCNEFTFPSVLKACSIKKDLNM 169
E D+VV W A+I+G N EAL F M + N ++L K L +
Sbjct: 276 VERDIVV-WGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKL 334
Query: 170 GRKVHGMSVVT-GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G++VH + + + FV + L+ +Y KCG + R++F + +SW AL S Y
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
+ +A+ M + G RP+ +++ +L CA LR +
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVS 454
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWA-LALLNEMKSS 347
+L+ MYSK G E + +F+ + ++ +W A+I C C+ A + + M S
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMI-DCYVENCDLRAGIEVFRLMLLS 513
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
P+ T+ L C+ + LG++LH ++K + +S FV+ +I MY KC L A
Sbjct: 514 KHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSA 573
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 173/355 (48%), Gaps = 13/355 (3%)
Query: 63 KSLTLGMELHAHLIRF-GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSA 121
K+L LG E+HAH+++ + P + L+ LY KCG R++ S + + + SW+A
Sbjct: 330 KALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAI-SWTA 388
Query: 122 LISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTG 181
L+SGY NG +AL + M G + + T +VL C+ + + G+++H ++
Sbjct: 389 LMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL 448
Query: 182 FDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFK 241
F + + +L+VMY+KCG +LF + +V +W A+ CYV++ +++F+
Sbjct: 449 FLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFR 508
Query: 242 EMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG 301
M+ RP+ ++ +L C+ L+ F + ++ MY K G
Sbjct: 509 LMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCG 568
Query: 302 RIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW---ALALLNEMKSSGACPNVFTISS 358
+ +A F+ + ++W A+I + CN+ A+ +M S G PN FT ++
Sbjct: 569 DLRSANFSFDAVAVKGSLTWTAIIEA---YGCNELFRDAINCFEQMVSRGFTPNTFTFTA 625
Query: 359 ALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
L C+ GF D + + +++ + + + V I++ ++C + +A+R+
Sbjct: 626 VLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLV--IELLNRCGRVEEAQRL 678
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 140/285 (49%), Gaps = 12/285 (4%)
Query: 135 ALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVV 194
AL + + G+ N TF ++L+AC +K L G++VH + G +S+ F+ LV
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 195 MYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS--DFCVEAVDLFKEMVRGGIRPNE 252
MY CG + D++K+F + +V SWNAL V S + + F EM G+ N
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 253 FSLSIILNACAG---LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAV 309
+SLS + + AG LR G F +LVDMY K G++ A V
Sbjct: 215 YSLSNVFKSFAGASALRQG---LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRV 271
Query: 310 FEEITHPDIVSWNAVIAGCVQHECNDW-ALALLNEMKSSGAC-PNVFTISSALKACAAVG 367
F+EI DIV W A+IAG + H W AL L M S PN +++ L V
Sbjct: 272 FDEIVERDIVVWGAMIAG-LAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVK 330
Query: 368 FKDLGRQLHSCLIK-IDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
LG+++H+ ++K + FV GLID+Y KC ++ RRV+
Sbjct: 331 ALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF 375
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 114/221 (51%), Gaps = 1/221 (0%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ F ++ +L C +++ G E+H + ++ F + S L+ +YSKCG Y
Sbjct: 412 EGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEY 471
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
+L D+ + +V +W+A+I YV+N + + F M + + + T VL CS
Sbjct: 472 PIRLFDRLEQRNVK-AWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
K L +G+++HG + F+S FV+ ++ MY KCG L + F ++ ++W A
Sbjct: 531 DLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTA 590
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
+ Y ++ +A++ F++MV G PN F+ + +L+ C+
Sbjct: 591 IIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICS 631
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Query: 236 AVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVD 295
A+ + + + GI N + S +L AC ++ ++F LV
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 296 MYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCV---QHECNDWALALLNEMKSSGACPN 352
MY+ G +++A VF+E T ++ SWNA++ G V + D L+ EM+ G N
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQD-VLSTFTEMRELGVDLN 213
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
V+++S+ K+ A G + H+ IK + F+ L+DMY KC + ARRV++
Sbjct: 214 VYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFD 273
Query: 413 LMPKKDII 420
+ ++DI+
Sbjct: 274 EIVERDIV 281
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 182/396 (45%), Gaps = 44/396 (11%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL----- 106
+ ++L C L G +H ++R G D N L+++Y+K G K+
Sbjct: 108 FPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKL--LGMGSKISVGNV 165
Query: 107 -------VDQSTETDV-------------------------VVSWSALISGYVQNGFGKE 134
S + DV VVS++ +I+GY Q+G ++
Sbjct: 166 FDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYED 225
Query: 135 ALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVV 194
AL +M +K + FT SVL S D+ G+++HG + G DSD ++ ++LV
Sbjct: 226 ALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVD 285
Query: 195 MYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFS 254
MYAK ++ DS ++F + +SWN+L + YVQ+ EA+ LF++MV ++P +
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 255 LSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT 314
S ++ ACA L + F A+ALVDMYSK G I+ A +F+ +
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 315 HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQ 374
D VSW A+I G H A++L EMK G PN + L AC+ VG D
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 375 LHSCLIKI---DTDSDFFVAVGLIDMYSKCEMLSDA 407
+ + K+ + + + + AV D+ + L +A
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVA--DLLGRAGKLEEA 499
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 184/389 (47%), Gaps = 40/389 (10%)
Query: 63 KSLTLGMELHAHLIRF-GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSA 121
KS + +LHA IR SH + + ++S+Y+ A L ++ ++ V++W +
Sbjct: 19 KSKSQAKQLHAQFIRTQSLSHTSA--SIVISIYTNLKLLHEALLLF-KTLKSPPVLAWKS 75
Query: 122 LISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTG 181
+I + +AL +F +M G + FPSVLK+C++ DL G VHG V G
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 182 FDSDGFVANTLVVMYAKCGQLGDS------------------------------------ 205
D D + N L+ MYAK +G
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 195
Query: 206 RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL 265
R++F + VVS+N + + Y QS +A+ + +EM ++P+ F+LS +L +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
+ D + ++LVDMY+K RIE++ VF + D +SWN+++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTD 385
AG VQ+ + AL L +M ++ P SS + ACA + LG+QLH +++
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELM 414
S+ F+A L+DMYSKC + AR++++ M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRM 404
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 138/268 (51%), Gaps = 5/268 (1%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G E+H ++IR G D + LV +Y+K R + ++ + D + SW++L++GYV
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI-SWNSLVAGYV 319
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
QNG EAL F M VK F SV+ AC+ L++G+++HG + GF S+ F
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
+A+ LV MY+KCG + +RK+F + VSW A+ + EAV LF+EM R G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 248 IRPNEFSLSIILNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
++PN+ + +L AC+ GL + + + A A+ D+ + G++E
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA-AVADLLGRAGKLEE 498
Query: 306 AVAVFEEI-THPDIVSWNAVIAGCVQHE 332
A ++ P W+ +++ C H+
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVHK 526
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 40 QCFQSFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCG 98
Q + KP +++++++ C +L LG +LH +++R GF + + LV +YSKCG
Sbjct: 333 QMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG 392
Query: 99 RFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVL 158
ARK+ D+ D VSW+A+I G+ +G G EA+ F +M GVK N+ F +VL
Sbjct: 393 NIKAARKIFDRMNVLD-EVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 451
Query: 159 KACSIKKDLNMGRKVHG----MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-V 213
ACS + + + G M+ V G + + + + + G+L ++ + V
Sbjct: 452 TACS---HVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCV 508
Query: 214 APSVVSWNALF-SCYVQSDF 232
P+ W+ L SC V +
Sbjct: 509 EPTGSVWSTLLSSCSVHKNL 528
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI 248
A+ ++ +Y L ++ LF ++ +P V++W ++ C+ +A+ F EM G
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 249 RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK----GGRI- 303
P+ +L +C + + D ++ NAL++MY+K G +I
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 304 -------------------------------ENAVAVFEEITHPDIVSWNAVIAGCVQHE 332
++ VFE + D+VS+N +IAG Q
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 333 CNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV 392
+ AL ++ EM ++ P+ FT+SS L + G+++H +I+ DSD ++
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 281
Query: 393 GLIDMYSKCEMLSDARRVYELMPKKDII 420
L+DMY+K + D+ RV+ + +D I
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGI 309
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 181/370 (48%), Gaps = 32/370 (8%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
SY L+ + G LHAHL+ G + LV+ Y +CG+ ARK+ D+
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ D+ +I +NG+ +E+L F +M G+K + F PS+LKA D G
Sbjct: 78 PKRDIS-GCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFG 136
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+ +H + + ++SD F+ ++L+ MY+K G++G++RK+F + +V +NA+ S Y +
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANN 196
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
EA++L K+M GI+P+ + + +++ + +RN +
Sbjct: 197 SQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN-------------------EEKV 237
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
+ ++++ G PD+VSW ++I+G V + N+ A +M + G
Sbjct: 238 SEILELMCLDG------------YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLY 285
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
PN TI + L AC + + G+++H + + FV L+DMY KC +S+A +
Sbjct: 286 PNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMIL 345
Query: 411 YELMPKKDII 420
+ PKK +
Sbjct: 346 FRKTPKKTTV 355
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
VVSW+++ISG V N ++A AF M G+ N T ++L AC+ + G+++HG
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG 312
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVE 235
SVVTG + GFV + L+ MY KCG + ++ LF + V++N++ CY +
Sbjct: 313 YSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADK 372
Query: 236 AVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRN-GSXXXXXXXXXXXXXXXXDQFSANA 292
AV+LF +M G + + + + IL AC AGL + G + ++
Sbjct: 373 AVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYA--C 430
Query: 293 LVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQH 331
+VD+ + G++ A + + + PD+ W A++A C H
Sbjct: 431 MVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNH 470
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 35/318 (11%)
Query: 61 ASKSL---TLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVV 117
AS++L G +H +++F + D + L+ +YSK G G ARK+ E D+VV
Sbjct: 126 ASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVV 185
Query: 118 SWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMS 177
++A+ISGY N EAL DM +LG+K + T+ +++ S ++ ++ +
Sbjct: 186 -FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM 244
Query: 178 VVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAV 237
+ G+ P VVSW ++ S V + +A
Sbjct: 245 CLDGYK-------------------------------PDVVSWTSIISGLVHNFQNEKAF 273
Query: 238 DLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMY 297
D FK+M+ G+ PN ++ +L AC L F +AL+DMY
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 298 SKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTIS 357
K G I A+ +F + V++N++I H D A+ L ++M+++G + T +
Sbjct: 334 GKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFT 393
Query: 358 SALKACAAVGFKDLGRQL 375
+ L AC+ G DLG+ L
Sbjct: 394 AILTACSHAGLTDLGQNL 411
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 21/224 (9%)
Query: 16 FKPQTIHTTSRTIVDSQTNVVSNSQCFQSFTKP------PISYT--NLLSQCVASKSLTL 67
+KP + TS I+ + N + F +F + P S T LL C +
Sbjct: 249 YKPDVVSWTS--IISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKH 306
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G E+H + + G R+ L+ +Y KCG A L + T V+++++I Y
Sbjct: 307 GKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF-RKTPKKTTVTFNSMIFCYA 365
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV-----HGMSVVTGF 182
+G +A+ F+ M G K + TF ++L ACS ++G+ + + +V
Sbjct: 366 NHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRL 425
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALFS 225
+ +V + + G+L ++ ++ ++ + P + W AL +
Sbjct: 426 EHYA----CMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLA 465
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 202/462 (43%), Gaps = 74/462 (16%)
Query: 22 HTTSRTIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFS 81
H T + + + + S +Q Q P +LL QC +KSL G +H HL GF
Sbjct: 21 HATKAELSQAVSRLESLTQ--QGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFK 78
Query: 82 HDPSF-RNHLVSLYSKCGR-----------------------FGY--------ARKLVDQ 109
+ NHL+ +Y KCG+ GY AR + D
Sbjct: 79 RPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDS 138
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
E DVV SW+ ++ GY Q+G EAL + + G+K NEF+F +L AC + L +
Sbjct: 139 MPERDVV-SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQL 197
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ---------------------------- 201
R+ HG +V GF S+ ++ +++ YAKCGQ
Sbjct: 198 NRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAK 257
Query: 202 LGD---SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSII 258
LGD + KLF + + VSW AL + YV+ A+DLF++M+ G++P +F+ S
Sbjct: 258 LGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSC 317
Query: 259 LNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE--EITHP 316
L A A + + + ++L+DMYSK G +E + VF + H
Sbjct: 318 LCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKH- 376
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG-RQL 375
D V WN +I+ QH AL +L++M PN T+ L AC+ G + G R
Sbjct: 377 DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWF 436
Query: 376 HSCLIK--IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
S ++ I D + + LID+ + + R E MP
Sbjct: 437 ESMTVQHGIVPDQEHYAC--LIDLLGRAGCFKELMRKIEEMP 476
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 141/320 (44%), Gaps = 45/320 (14%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S+ LL+ CV S+ L L + H ++ GF + ++ Y+KCG+ A++ D+
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 111 TETDV------------------------------VVSWSALISGYVQNGFGKEALLAFN 140
T D+ VSW+ALI+GYV+ G G AL F
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 141 DMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCG 200
M LGVK +FTF S L A + L G+++HG + T + V ++L+ MY+K G
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Query: 201 QLGDSRKLFGSI-VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
L S ++F V WN + S Q +A+ + +M++ ++PN +L +IL
Sbjct: 361 SLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Query: 260 NACA-------GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE 312
NAC+ GLR DQ L+D+ + G + + EE
Sbjct: 421 NACSHSGLVEEGLR------WFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEE 474
Query: 313 IT-HPDIVSWNAVIAGCVQH 331
+ PD WNA++ C H
Sbjct: 475 MPFEPDKHIWNAILGVCRIH 494
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%)
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
+S N +V Y K G + A VF+ + D+VSWN ++ G Q AL E + S
Sbjct: 114 YSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS 173
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
G N F+ + L AC L RQ H ++ S+ ++ +ID Y+KC + A
Sbjct: 174 GIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESA 233
Query: 408 RRVYELMPKKDI 419
+R ++ M KDI
Sbjct: 234 KRCFDEMTVKDI 245
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 186/380 (48%), Gaps = 12/380 (3%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGR---FGYARKLVD 108
Y +LSQ +SL +LH +I+ + + L+ + C YAR V
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARS-VF 64
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+S + V W+++I GY + +AL+ + +M G + FTFP VLKACS +D+
Sbjct: 65 ESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQ 124
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G VHG V TGF+ + +V+ L+ MY CG++ ++F I +VV+W +L S +V
Sbjct: 125 FGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFV 184
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRN--------GSXXXXXXXXXXX 280
++ +A++ F+EM G++ NE + +L AC ++ G
Sbjct: 185 NNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQ 244
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALAL 340
+ A +L+DMY+K G + A +F+ + +VSWN++I G Q+ + AL +
Sbjct: 245 SKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCM 304
Query: 341 LNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSK 400
+M G P+ T S ++A G LG+ +H+ + K D + L++MY+K
Sbjct: 305 FLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAK 364
Query: 401 CEMLSDARRVYELMPKKDII 420
A++ +E + KKD I
Sbjct: 365 TGDAESAKKAFEDLEKKDTI 384
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 182/385 (47%), Gaps = 11/385 (2%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ ++ ++ +L C + + G +H +++ GF + L+ +Y CG Y
Sbjct: 101 KGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNY 160
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
++ + + +VV +W +LISG+V N +A+ AF +M GVK NE +L AC
Sbjct: 161 GLRVFEDIPQWNVV-AWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACG 219
Query: 163 IKKDLNMGRKVHGMSVVTGFDSD-----GF---VANTLVVMYAKCGQLGDSRKLFGSIVA 214
KD+ G+ HG GFD GF +A +L+ MYAKCG L +R LF +
Sbjct: 220 RCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPE 279
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
++VSWN++ + Y Q+ EA+ +F +M+ GI P++ + ++ A
Sbjct: 280 RTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSI 339
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECN 334
D ALV+MY+K G E+A FE++ D ++W VI G H
Sbjct: 340 HAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHG 399
Query: 335 DWALALLNEMKSSG-ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
+ AL++ M+ G A P+ T L AC+ +G + G++ + + + G
Sbjct: 400 NEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYG 459
Query: 394 -LIDMYSKCEMLSDARRVYELMPKK 417
++D+ S+ +A R+ + MP K
Sbjct: 460 CMVDILSRAGRFEEAERLVKTMPVK 484
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 143/314 (45%), Gaps = 24/314 (7%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNH----------LVSLYSKCGRFGYA 103
+LL C K + G H L GF DP F++ L+ +Y+KCG A
Sbjct: 213 DLLVACGRCKDIVTGKWFHGFLQGLGF--DPYFQSKVGFNVILATSLIDMYAKCGDLRTA 270
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
R L D E +VSW+++I+GY QNG +EAL F DM LG+ ++ TF SV++A I
Sbjct: 271 RYLFDGMPER-TLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMI 329
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNAL 223
+ +G+ +H TGF D + LV MYAK G ++K F + ++W +
Sbjct: 330 QGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVV 389
Query: 224 FSCYVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSIILNACAGL---RNGSXXXXXXXXXX 279
EA+ +F+ M +G P+ + +L AC+ + G
Sbjct: 390 IIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH 449
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDWAL 338
+ + +VD+ S+ GR E A + + + P++ W A++ GC HE L
Sbjct: 450 GLEPTVEHYG--CMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE----NL 503
Query: 339 ALLNEMKSSGACPN 352
L + ++S A P
Sbjct: 504 ELTDRIRSMVAEPE 517
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 67 LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
LG +HA++ + GF D + LV++Y+K G A+K + + D ++W+ +I G
Sbjct: 335 LGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKD-TIAWTVVIIGL 393
Query: 127 VQNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKACSIKKDLNMGRKVHG-MSVVTGFDS 184
+G G EAL F M G + T+ VL ACS + G++ M + G +
Sbjct: 394 ASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEP 453
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALFS-CYVQSDFCVEAVDLFKE 242
+V + ++ G+ ++ +L ++ V P+V W AL + C + + +E D +
Sbjct: 454 TVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHEN--LELTDRIRS 511
Query: 243 MVRGGIRPNEFSLSI 257
MV P E I
Sbjct: 512 MV---AEPEELGSGI 523
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 167/364 (45%), Gaps = 2/364 (0%)
Query: 53 TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
T + C S + G + H +++G RN LV +YS C G A +++D
Sbjct: 140 TVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY 199
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK 172
D+ V SAL SGY++ G KE L N T+ S L+ S +DLN+ +
Sbjct: 200 CDLSVFSSAL-SGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQ 258
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDF 232
VH V GF+++ L+ MY KCG++ ++++F A ++ + Y Q
Sbjct: 259 VHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKS 318
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
EA++LF +M + PNE++ +I+LN+ A L NA
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
LV+MY+K G IE+A F +T DIV+WN +I+GC H AL + M +G PN
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLI-KIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
T L+AC+ +GF + G + L+ K D D ++ + SK M DA
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFM 498
Query: 412 ELMP 415
P
Sbjct: 499 RTAP 502
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 174/380 (45%), Gaps = 6/380 (1%)
Query: 46 TKPPISYTN-LLSQCVASKSLTLGMELHAHLI---RFGFSHDPSFRNHLVSLYSKCGRFG 101
T PI N LL C S L +G +HAHLI + + D N L++LY KC
Sbjct: 27 TPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETV 86
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKA 160
ARKL D E +VV SW A++ GY +GF E L F M G + NEF V K+
Sbjct: 87 RARKLFDLMPERNVV-SWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKS 145
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
CS + G++ HG + G S FV NTLV MY+ C G++ ++ + + +
Sbjct: 146 CSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVF 205
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXX 280
++ S Y++ E +D+ ++ N + L + LR+ +
Sbjct: 206 SSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR 265
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALAL 340
+ + AL++MY K G++ A VF++ +I ++ Q + + AL L
Sbjct: 266 FGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNL 325
Query: 341 LNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSK 400
++M + PN +T + L + A + G LH ++K + V L++MY+K
Sbjct: 326 FSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAK 385
Query: 401 CEMLSDARRVYELMPKKDII 420
+ DAR+ + M +DI+
Sbjct: 386 SGSIEDARKAFSGMTFRDIV 405
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 11/292 (3%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ F ++Y + L + L L +++H+ ++RFGF+ + L+++Y KCG+ Y
Sbjct: 231 EDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLY 290
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A+++ D + ++ ++ + ++ Y Q+ +EAL F+ M V NE+TF +L + +
Sbjct: 291 AQRVFDDTHAQNIFLN-TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIA 349
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
L G +HG+ + +G+ + V N LV MYAK G + D+RK F + +V+WN
Sbjct: 350 ELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNT 409
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL---RNGSXXXXXXXXXX 279
+ S EA++ F M+ G PN + +L AC+ + G
Sbjct: 410 MISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKF 469
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP---DIVSWNAVIAGC 328
++ +V + SK G ++A T P D+V+W ++ C
Sbjct: 470 DVQPDIQHYT--CIVGLLSKAGMFKDAEDFMR--TAPIEWDVVAWRTLLNAC 517
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 176/398 (44%), Gaps = 36/398 (9%)
Query: 45 FTKP-PISY---TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF 100
F P P+SY L C + + ++ +HL+ F N + Y KCG
Sbjct: 53 FASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCV 112
Query: 101 GYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA 160
AR+L ++ E D SW+A+I+ QNG E F M GV+ E +F VLK+
Sbjct: 113 DDARELFEEMPERDGG-SWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKS 171
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
C + DL + R++H V G+ + + ++V +Y KC + D+R++F IV PS VSW
Sbjct: 172 CGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSW 231
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXX 280
N + Y++ F EAV +F +M+ +RP ++S ++ AC+
Sbjct: 232 NVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVK 291
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPD----------------------- 317
D + ++ DMY K R+E+A VF++ D
Sbjct: 292 LSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAREL 351
Query: 318 --------IVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK 369
IVSWNA++ G V D AL L M+ + T+ L C+ +
Sbjct: 352 FDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDV 411
Query: 370 DLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
+G+Q H + + D++ VA L+DMY KC L A
Sbjct: 412 QMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSA 449
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 188/402 (46%), Gaps = 34/402 (8%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S+ +L C L L +LH ++++G+S + +V +Y KC AR++ D+
Sbjct: 164 SFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI 223
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
V SW+ ++ Y++ GF EA++ F M L V+ T SV+ ACS L +G
Sbjct: 224 VNPSDV-SWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+ +H ++V +D V+ ++ MY KC +L +R++F + + SW + S Y S
Sbjct: 283 KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMS 342
Query: 231 DFCVEAVDLF-----------KEMVRGGIRPNEF--------------------SLSIIL 259
EA +LF M+ G + +E+ +L IL
Sbjct: 343 GLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWIL 402
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH-PDI 318
N C+G+ + + ANAL+DMY K G +++A F +++ D
Sbjct: 403 NVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDE 462
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSC 378
VSWNA++ G + ++ AL+ M+ A P+ +T+++ L CA + +LG+ +H
Sbjct: 463 VSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGF 521
Query: 379 LIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
LI+ D + ++DMYSKC A V++ +D+I
Sbjct: 522 LIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLI 563
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 178/402 (44%), Gaps = 37/402 (9%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P+++T +++ C S +L +G +HA ++ D + +Y KC R AR++
Sbjct: 261 PLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRV 320
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDM---------CMLG--VKCNEF--- 152
DQ+ D+ SW++ +SGY +G +EA F+ M MLG V +E+
Sbjct: 321 FDQTRSKDLK-SWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEA 379
Query: 153 -----------------TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM 195
T +L CS D+ MG++ HG G+D++ VAN L+ M
Sbjct: 380 LDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDM 439
Query: 196 YAKCGQLGDSRKLFGSIVA-PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFS 254
Y KCG L + F + VSWNAL + + +A+ F+ M + +P++++
Sbjct: 440 YGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYT 498
Query: 255 LSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT 314
L+ +L CA + + D A+VDMYSK + A+ VF+E
Sbjct: 499 LATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAA 558
Query: 315 HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQ 374
D++ WN++I GC ++ + L +++ G P+ T L+AC G +LG Q
Sbjct: 559 TRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQ 618
Query: 375 LHSCL-IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
S + K +I++Y K L LMP
Sbjct: 619 YFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMP 660
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%)
Query: 152 FTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGS 211
+ + + ++CS K + RKV V F+ N + Y KCG + D+R+LF
Sbjct: 62 WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEE 121
Query: 212 IVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXX 271
+ SWNA+ + Q+ E +F+ M R G+R E S + +L +C + +
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH 331
+ ++VD+Y K + +A VF+EI +P VSWN ++ ++
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVA 391
ND A+ + +M P T+SS + AC+ ++G+ +H+ +K+ +D V+
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 392 VGLIDMYSKCEMLSDARRVYELMPKKDI 419
+ DMY KC+ L ARRV++ KD+
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDL 329
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 173/351 (49%), Gaps = 8/351 (2%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
++HA ++R GFS S L+ G YAR++ D+ + + + W+ L GYV+N
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFL-WNTLFKGYVRN 87
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
E+LL + M LGV+ +EFT+P V+KA S D + G +H V GF G VA
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIR 249
LV+MY K G+L + LF S+ +V+WNA + VQ+ A++ F +M ++
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 250 PNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAV 309
+ F++ +L+AC L + + NA +DM+ K G E A +
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 310 FEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK 369
FEE+ ++VSW+ +I G + + AL L M++ G PN T L AC+ G
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 370 DLGRQLHSCLIK-----IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+ G++ S +++ ++ + + ++D+ + +L +A + MP
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYAC--MVDLLGRSGLLEEAYEFIKKMP 376
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 124/250 (49%)
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+K+H + + TGF + L+ G + +R++F + P + WN LF YV++
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
E++ L+K+M G+RP+EF+ ++ A + L + S A
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
LV MY K G + +A +FE + D+V+WNA +A CVQ + AL N+M +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
+ FT+ S L AC +G ++G +++ K + D + V +DM+ KC AR +
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 411 YELMPKKDII 420
+E M +++++
Sbjct: 268 FEEMKQRNVV 277
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 5/268 (1%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G LHAH++++GF LV +Y K G A L +S + +V+W+A ++ V
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLF-ESMQVKDLVAWNAFLAVCV 186
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
Q G AL FN MC V+ + FT S+L AC L +G +++ + D +
Sbjct: 187 QTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII 246
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
V N + M+ KCG +R LF + +VVSW+ + Y + EA+ LF M G
Sbjct: 247 VENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG 306
Query: 248 IRPNEFSLSIILNAC--AGLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
+RPN + +L+AC AGL N G + +VD+ + G +E
Sbjct: 307 LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLE 366
Query: 305 NAVAVFEEI-THPDIVSWNAVIAGCVQH 331
A +++ PD W A++ C H
Sbjct: 367 EAYEFIKKMPVEPDTGIWGALLGACAVH 394
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 198/435 (45%), Gaps = 74/435 (17%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCG-----RFGYARK 105
+ TN+L+ A++ + G ++H+ +++ G + S N L+++Y+KCG +F + R
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 106 LV--------------------------DQSTETDVVVSWSALISGYVQNGFGKEALLAF 139
+V +Q E D+V +W+++ISG+ Q G+ AL F
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV-TWNSMISGFNQRGYDLRALDIF 266
Query: 140 NDMCMLGV-KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAK 198
+ M + + FT SVL AC+ + L +G+++H V TGFD G V N L+ MY++
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 199 CG------------------------------QLGD---SRKLFGSIVAPSVVSWNALFS 225
CG +LGD ++ +F S+ VV+W A+
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX 285
Y Q EA++LF+ MV GG RPN ++L+ +L+ + L + S
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+NAL+ MY+K G I +A F+ I D VSW ++I QH + AL L M
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID----TDSDFFVAVGLIDMYSK 400
G P+ T AC G + GRQ + +D T S + ++D++ +
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHY---ACMVDLFGR 563
Query: 401 CEMLSDARRVYELMP 415
+L +A+ E MP
Sbjct: 564 AGLLQEAQEFIEKMP 578
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 187/458 (40%), Gaps = 96/458 (20%)
Query: 53 TNLLSQCVASKSLTLGMEL-HAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ-- 109
TNLL + V + +L H +I+ G N+L+++YSK G +ARKL D+
Sbjct: 17 TNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP 76
Query: 110 --------------STETDV--------------VVSWSALISGYVQNGFGKEALLAFND 141
S D+ VSW+ +I GY G +A+ D
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 142 MCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC-- 199
M G++ +FT +VL + + + + G+KVH V G + V+N+L+ MYAKC
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 200 -----------------------------GQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
GQ+ + F + +V+WN++ S + Q
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 231 DFCVEAVDLFKEMVRGG-IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ + A+D+F +M+R + P+ F+L+ +L+ACA L
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 290 ANALVDMYSKGGRIENAVAVFEE---------------------------------ITHP 316
NAL+ MYS+ G +E A + E+ +
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLH 376
D+V+W A+I G QH A+ L M G PN +T+++ L +++ G+Q+H
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 377 SCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELM 414
+K V+ LI MY+K ++ A R ++L+
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI 474
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 163/351 (46%), Gaps = 44/351 (12%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+ ++LS C + L +G ++H+H++ GF N L+S+YS+CG AR+L++Q
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 111 TETDV--------------------------------VVSWSALISGYVQNGFGKEALLA 138
D+ VV+W+A+I GY Q+G EA+
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 139 FNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAK 198
F M G + N +T ++L S L+ G+++HG +V +G V+N L+ MYAK
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 199 CGQLGDSRKLFGSI-VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSI 257
G + + + F I VSW ++ Q EA++LF+ M+ G+RP+ +
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 258 ILNAC--AGLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI- 313
+ +AC AGL N G ++ +VD++ + G ++ A E++
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC--MVDLFGRAGLLQEAQEFIEKMP 578
Query: 314 THPDIVSWNAVIAGCVQHECNDWALA-----LLNEMKSSGACPNVFTISSA 359
PD+V+W ++++ C H+ D LL E ++SGA + + SA
Sbjct: 579 IEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSA 629
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 32/266 (12%)
Query: 186 GFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR 245
F NT++ Y+K G + + + F + VSW + Y +A+ + +MV+
Sbjct: 80 AFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK 139
Query: 246 GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK------ 299
GI P +F+L+ +L + A R + +N+L++MY+K
Sbjct: 140 EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 300 -------------------------GGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECN 334
G+++ A+A FE++ DIV+WN++I+G Q +
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 335 DWALALLNEM-KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
AL + ++M + S P+ FT++S L ACA + +G+Q+HS ++ D V
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 394 LIDMYSKCEMLSDARRVYELMPKKDI 419
LI MYS+C + ARR+ E KD+
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDL 345
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 186/356 (52%), Gaps = 8/356 (2%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G ++H ++IR GF S +N ++ +Y+ ARKL D+ +E DV+ SWS +I YV
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVI-SWSVVIRSYV 201
Query: 128 QNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD-SD 185
Q+ L F +M + + T SVLKAC++ +D+++GR VHG S+ GFD +D
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 186 GFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR 245
FV N+L+ MY+K + + ++F ++VSWN++ + +V + EA+++F MV+
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ 321
Query: 246 GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
+ +E ++ +L C ++ + ++L+D Y+ +++
Sbjct: 322 EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDD 381
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
A V + +T+ D+VS + +I+G +D A+++ M+ + PN T+ S L AC+
Sbjct: 382 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSV 438
Query: 366 VGFKDLGRQLHSCLIKIDTD-SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ H I+ +D V ++D Y+KC + ARR ++ + +K+II
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNII 494
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 164/336 (48%), Gaps = 8/336 (2%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N + Y KCG + D D V SW+ ++ G + GF +E L F+ + + G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSV-SWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 148 KCNEFTFPSVLKAC-SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+ N T V+ AC S+ D G K+HG + +GF V N+++ MYA L +R
Sbjct: 124 EPNTSTLVLVIHACRSLWFD---GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-AR 179
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSIILNACAGL 265
KLF + V+SW+ + YVQS V + LFKEMV P+ +++ +L AC +
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 239
Query: 266 RN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAV 324
+ D F N+L+DMYSKG +++A VF+E T +IVSWN++
Sbjct: 240 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSI 299
Query: 325 IAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDT 384
+AG V ++ D AL + + M + T+ S L+ C + +H +I+
Sbjct: 300 LAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGY 359
Query: 385 DSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+S+ LID Y+ C ++ DA V + M KD++
Sbjct: 360 ESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVV 395
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 188/400 (47%), Gaps = 15/400 (3%)
Query: 26 RTIVDSQTNVVS----NSQCFQSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRFGF 80
R+ V S+ VV ++ T+P ++ T++L C + + +G +H IR GF
Sbjct: 198 RSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGF 257
Query: 81 SHDPSFR-NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAF 139
F N L+ +YSK A ++ D++T ++V SW+++++G+V N EAL F
Sbjct: 258 DLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIV-SWNSILAGFVHNQRYDEALEMF 316
Query: 140 NDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC 199
+ M V+ +E T S+L+ C + + +HG+ + G++S+ ++L+ Y C
Sbjct: 317 HLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSC 376
Query: 200 GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
+ D+ + S+ VVS + + S + EA+ +F M PN ++ +L
Sbjct: 377 SLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLL 433
Query: 260 NAC---AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP 316
NAC A LR + D ++VD Y+K G IE A F++IT
Sbjct: 434 NACSVSADLR--TSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEK 491
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLH 376
+I+SW +I+ + D ALAL +EMK G PN T +AL AC G G +
Sbjct: 492 NIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIF 551
Query: 377 SCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPK 416
+++ D ++DM S+ + A + + +P+
Sbjct: 552 KSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPE 591
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 27/296 (9%)
Query: 129 NGFGKEALLAFNDMCMLGVKCNE-FTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
+G +E + ++++ GV+ N+ F FP V KAC+ L F
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWL-------------------F 62
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
N++ Y KCG L + F + + VSWN + + F E + F ++ G
Sbjct: 63 QGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 248 IRPNEFSLSIILNACAGLR-NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
PN +L ++++AC L +G Q N+++ MY+ + +A
Sbjct: 123 FEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQ---NSILCMYADSDSL-SA 178
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM-KSSGACPNVFTISSALKACAA 365
+F+E++ D++SW+ VI VQ + L L EM + P+ T++S LKAC
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 366 VGFKDLGRQLHSCLIKIDTD-SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ D+GR +H I+ D +D FV LIDMYSK + A RV++ ++I+
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIV 294
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 186/371 (50%), Gaps = 11/371 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY------SKCGRFGYAR 104
+Y++ L C +K+L G +H HLIR + N L+++Y C + R
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
K+ D +VV +W+ LIS YV+ G EA F M + VK + +F +V A SI
Sbjct: 169 KVFDNMRRKNVV-AWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 165 KDLNMGRKVHGMSVVTG--FDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
+ + +G+ + G + D FV ++ + MYA+ G + SR++F S V ++ WN
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGG-IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
+ YVQ+D VE+++LF E + I +E + + +A + L+
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALL 341
N+L+ MYS+ G + + VF + D+VSWN +I+ VQ+ +D L L+
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
EM+ G + T+++ L A + + K++G+Q H+ LI+ + + LIDMYSK
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY-LIDMYSKS 466
Query: 402 EMLSDARRVYE 412
++ +++++E
Sbjct: 467 GLIRISQKLFE 477
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 187/380 (49%), Gaps = 12/380 (3%)
Query: 47 KP-PISYTNLLSQCVASKSLTLGMELHAHLIRFG--FSHDPSFRNHLVSLYSKCGRFGYA 103
KP P+S+ N+ S+S+ + +++ G + D + +S+Y++ G +
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVK---CNEFTFPSVLKA 160
R++ D E ++ V W+ +I YVQN E++ F + +G K +E T+ A
Sbjct: 271 RRVFDSCVERNIEV-WNTMIGVYVQNDCLVESIELF--LEAIGSKEIVSDEVTYLLAASA 327
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
S + + +GR+ HG + + N+L+VMY++CG + S +F S+ VVSW
Sbjct: 328 VSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSW 387
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXX 280
N + S +VQ+ E + L EM + G + + +++ +L+A + LRN
Sbjct: 388 NTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIR 447
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEE--ITHPDIVSWNAVIAGCVQHECNDWAL 338
+ ++ L+DMYSK G I + +FE D +WN++I+G Q+ +
Sbjct: 448 QGIQFEGMNS-YLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTF 506
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMY 398
+ +M PN T++S L AC+ +G DLG+QLH I+ D + FVA L+DMY
Sbjct: 507 LVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMY 566
Query: 399 SKCEMLSDARRVYELMPKKD 418
SK + A ++ +++
Sbjct: 567 SKAGAIKYAEDMFSQTKERN 586
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 166/331 (50%), Gaps = 10/331 (3%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDP-SFRNHLVSLYSKCGRFGYARKLVD 108
++Y S A + + LG + H + + F P N L+ +YS+CG + +
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSK-NFRELPIVIVNSLMVMYSRCGSVHKSFGVFL 377
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
E DVV SW+ +IS +VQNG E L+ +M G K + T ++L A S ++
Sbjct: 378 SMRERDVV-SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 436
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF-GSIVAP-SVVSWNALFSC 226
+G++ H + G +G + + L+ MY+K G + S+KLF GS A +WN++ S
Sbjct: 437 IGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISG 495
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
Y Q+ + +F++M+ IRPN +++ IL AC+ + GS D
Sbjct: 496 YTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQI--GSVDLGKQLHGFSIRQYLD 553
Query: 287 Q--FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
Q F A+ALVDMYSK G I+ A +F + + V++ +I G QH + A++L M
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 613
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQL 375
+ SG P+ T + L AC+ G D G ++
Sbjct: 614 QESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 116/223 (52%), Gaps = 4/223 (1%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
Q F I+ T LLS ++ +G + HA LIR G + ++L+ +YSK G
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRI 471
Query: 103 ARKLVDQS--TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA 160
++KL + S E D +W+++ISGY QNG ++ L F M ++ N T S+L A
Sbjct: 472 SQKLFEGSGYAERDQA-TWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPA 530
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
CS +++G+++HG S+ D + FVA+ LV MY+K G + + +F + V++
Sbjct: 531 CSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTY 590
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
+ Y Q A+ LF M GI+P+ + +L+AC+
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACS 633
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 13/348 (3%)
Query: 84 PSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMC 143
PS R+ L S + G AR+L D + V+ W+ +I G++ N EALL ++ M
Sbjct: 40 PSIRSRL-SKICQDGNPQLARQLFDAIPKPTTVL-WNTIIIGFICNNLPHEALLFYSRMK 97
Query: 144 MLG--VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ 201
C+ +T+ S LKAC+ K+L G+ VH + +S V N+L+ MY C
Sbjct: 98 KTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN 157
Query: 202 LGD------SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSL 255
D RK+F ++ +VV+WN L S YV++ EA F M+R ++P+ S
Sbjct: 158 APDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSF 217
Query: 256 SIILNACAGLRN--GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
+ A + R+ + D F ++ + MY++ G IE++ VF+
Sbjct: 218 VNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC 277
Query: 314 THPDIVSWNAVIAGCVQHECNDWALAL-LNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
+I WN +I VQ++C ++ L L + S + T A A +A+ +LG
Sbjct: 278 VERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELG 337
Query: 373 RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
RQ H + K + + L+ MYS+C + + V+ M ++D++
Sbjct: 338 RQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVV 385
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
Q+ ++ ++L C S+ LG +LH IR + + LV +YSK G Y
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A + Q+ E + V+++ +I GY Q+G G+ A+ F M G+K + TF +VL ACS
Sbjct: 575 AEDMFSQTKERN-SVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACS 633
Query: 163 IKKDLNMGRKV 173
++ G K+
Sbjct: 634 YSGLIDEGLKI 644
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 192/401 (47%), Gaps = 16/401 (3%)
Query: 27 TIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIR-FGFSHDPS 85
T +D ++ NS S P +YT+LL C+++KSL G+++ + ++ H+P
Sbjct: 109 TKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPK 168
Query: 86 FRNHLVSLYSKCGRFGYARKLVDQSTETDVVVS--WSALISGYVQNGFGKEALLAFNDMC 143
+ L++L+S C R ARK+ D T++ ++ W+A+ GY +NG ++AL+ + DM
Sbjct: 169 LLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML 228
Query: 144 MLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLG 203
++ F+ LKAC KDL +GR +H V D V N L+ +Y + G
Sbjct: 229 CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFD 288
Query: 204 DSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
D+RK+F + +VV+WN+L S + E +LF++M I + +L+ IL AC+
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Query: 264 GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNA 323
+ D N+L+DMY K G +E + VF+ + D+ SWN
Sbjct: 349 RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWN- 407
Query: 324 VIAGCVQHECN-DWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKI 382
++ C N + + L M SG P+ T + L C+ G + G L +
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM--- 464
Query: 383 DTDSDFFVAVG------LIDMYSKCEMLSDARRVYELMPKK 417
++F V+ L+D+ + + +A +V E MP K
Sbjct: 465 --KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFK 503
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 133/270 (49%), Gaps = 4/270 (1%)
Query: 154 FPSVLKACSIKKDLNMGRKVHGMSVVT-GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
+ +L AC K L+ G K+ + + + + + L+ +++ C +L +RK+F +
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDV 193
Query: 213 VAPSVVS---WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGS 269
S+++ W A+ Y ++ +A+ ++ +M+ I P FS+S+ L AC L++
Sbjct: 194 TDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLR 253
Query: 270 XXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCV 329
DQ N L+ +Y + G ++A VF+ ++ ++V+WN++I+
Sbjct: 254 VGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLS 313
Query: 330 QHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFF 389
+ L +M+ + T+++ L AC+ V G+++H+ ++K D
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP 373
Query: 390 VAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+ L+DMY KC + +RRV+++M KD+
Sbjct: 374 LLNSLMDMYGKCGEVEYSRRVFDVMLTKDL 403
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVS---WNAVIAGCVQHECNDWALALLNEMKSSGA 349
L+ ++S R++ A +F+++T +++ W A+ G ++ AL + +M S
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 350 CPNVFTISSALKACAAVGFKDL--GRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
P F+IS ALKAC V KDL GR +H+ ++K D V L+ +Y + + DA
Sbjct: 233 EPGNFSISVALKAC--VDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 408 RRVYELMPKKDII 420
R+V++ M +++++
Sbjct: 291 RKVFDGMSERNVV 303
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 196/378 (51%), Gaps = 20/378 (5%)
Query: 46 TKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSH--DPSFRNHLVSLYSKC---GRF 100
T+ PI L+S+C + + L M++ A+ I+ SH D SF L++ ++
Sbjct: 29 TQNPIL---LISKCNSLREL---MQIQAYAIK---SHIEDVSFVAKLINFCTESPTESSM 79
Query: 101 GYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA 160
YAR L + +E D+V+ ++++ GY + E F ++ G+ + +TFPS+LKA
Sbjct: 80 SYARHLFEAMSEPDIVI-FNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
C++ K L GR++H +S+ G D + +V TL+ MY +C + +R +F IV P VV +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXX 280
NA+ + Y + + EA+ LF+EM ++PNE +L +L++CA L GS
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL--GSLDLGKWIHKYA 256
Query: 281 XXXXXDQFSA--NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL 338
++ AL+DM++K G +++AV++FE++ + D +W+A+I H + ++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI-KIDTDSDFFVAVGLIDM 397
+ M+S P+ T L AC+ G + GR+ S ++ K ++D+
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 398 YSKCEMLSDARRVYELMP 415
S+ L DA + +P
Sbjct: 377 LSRAGNLEDAYEFIDKLP 394
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%)
Query: 205 SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG 264
+R LF ++ P +V +N++ Y + +E LF E++ GI P+ ++ +L ACA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 265 LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAV 324
+ + + L++MY++ +++A VF+ I P +V +NA+
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 325 IAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDT 384
I G + + AL+L EM+ PN T+ S L +CA +G DLG+ +H K
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 385 DSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
V LIDM++KC L DA ++E M KD
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKD 295
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 187/378 (49%), Gaps = 9/378 (2%)
Query: 49 PISYTNLLSQ-----CVASKSLTLGMELHAHLIRFGF-SHDPSFRNHLVSLYSKCGRFGY 102
P SY LLS L G E+H H+I G N LV++Y+KCG
Sbjct: 308 PESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIAD 367
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
AR++ T+ D V SW+++I+G QNG EA+ + M + FT S L +C+
Sbjct: 368 ARRVFYFMTDKDSV-SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
K +G+++HG S+ G D + V+N L+ +YA+ G L + RK+F S+ VSWN+
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486
Query: 223 LFSCYVQSDFCV-EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
+ +S+ + EAV F R G + N + S +L+A + L G
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN 546
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITH-PDIVSWNAVIAGCVQHECNDWALAL 340
+ + NAL+ Y K G ++ +F + D V+WN++I+G + +E AL L
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL 606
Query: 341 LNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSK 400
+ M +G + F ++ L A A+V + G ++H+C ++ +SD V L+DMYSK
Sbjct: 607 VWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSK 666
Query: 401 CEMLSDARRVYELMPKKD 418
C L A R + MP ++
Sbjct: 667 CGRLDYALRFFNTMPVRN 684
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 179/362 (49%), Gaps = 15/362 (4%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
H+ L + D N+L++ Y + G ARK+ D+ + V SW+ ++SGY +NG
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCV-SWACIVSGYSRNG 81
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM--GRKVHGMSVVTGFDSDGFV 188
KEAL+ DM G+ N++ F SVL+AC + + GR++HG+ + D V
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 189 ANTLVVMYAKC-GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
+N L+ MY KC G +G + FG I + VSWN++ S Y Q+ A +F M G
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 248 IRPNEFSL-SIILNACAGLR-NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
RP E++ S++ AC+ + D F + LV ++K G +
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS-GACPNVFTI--SSALKA 362
A VF ++ + V+ N ++ G V+ + + A L +M S P + I SS +
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEY 321
Query: 363 CAA--VGFKDLGRQLHSCLIKIDTDSDFFVAV--GLIDMYSKCEMLSDARRVYELMPKKD 418
A VG K GR++H +I DF V + GL++MY+KC ++DARRV+ M KD
Sbjct: 322 SLAEEVGLKK-GREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 419 II 420
+
Sbjct: 380 SV 381
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 187/383 (48%), Gaps = 17/383 (4%)
Query: 51 SYTNLLSQC--VASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKC-GRFGYARKLV 107
++ ++L C + S + G ++H + + ++ D N L+S+Y KC G GYA
Sbjct: 104 AFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAF 163
Query: 108 DQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPS-VLKACSI-KK 165
E VSW+++IS Y Q G + A F+ M G + E+TF S V ACS+ +
Sbjct: 164 GD-IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEP 222
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
D+ + ++ +G +D FV + LV +AK G L +RK+F + + V+ N L
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMV 282
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--------AGLRNGSXXXXXXXX 277
V+ + EA LF +M I + S I+L++ GL+ G
Sbjct: 283 GLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWA 337
N LV+MY+K G I +A VF +T D VSWN++I G Q+ C A
Sbjct: 342 TGLVDFMVG--IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEA 399
Query: 338 LALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDM 397
+ M+ P FT+ S+L +CA++ + LG+Q+H +K+ D + V+ L+ +
Sbjct: 400 VERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 398 YSKCEMLSDARRVYELMPKKDII 420
Y++ L++ R+++ MP+ D +
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQV 482
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 159/329 (48%), Gaps = 6/329 (1%)
Query: 49 PISYTNL--LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P S+T + LS C + K LG ++H ++ G + S N L++LY++ G RK+
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 107 VDQSTETDVVVSWSALISGYVQNGFG-KEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
E D V SW+++I ++ EA++ F + G K N TF SVL A S
Sbjct: 473 FSSMPEHDQV-SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP-SVVSWNALF 224
+G+++HG+++ + N L+ Y KCG++ K+F + V+WN++
Sbjct: 532 FGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
S Y+ ++ +A+DL M++ G R + F + +L+A A +
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 651
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
D +ALVDMYSK GR++ A+ F + + SWN++I+G +H + AL L M
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711
Query: 345 KSSGAC-PNVFTISSALKACAAVGFKDLG 372
K G P+ T L AC+ G + G
Sbjct: 712 KLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 7/267 (2%)
Query: 67 LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
LG ++H ++ + + + N L++ Y KCG K+ + E V+W+++ISGY
Sbjct: 535 LGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
+ N +AL M G + + F + +VL A + L G +VH SV +SD
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM-VR 245
V + LV MY+KCG+L + + F ++ + SWN++ S Y + EA+ LF+ M +
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 246 GGIRPNEFSLSIILNAC--AG-LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
G P+ + +L+AC AG L G + FS + D+ + G
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFS--CMADVLGRAGE 772
Query: 303 IENAVAVFEEI-THPDIVSWNAVIAGC 328
++ E++ P+++ W V+ C
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGAC 799
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 174/370 (47%), Gaps = 3/370 (0%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S+T L C S G+ +H + G D LV +Y K AR++ D+
Sbjct: 102 SFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKM 161
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
DVV +W+ ++SG QNG ALL F+DM V + + +++ A S + ++
Sbjct: 162 HVKDVV-TWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVC 220
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
R +HG+ + GF ++ L+ MY C L + +F + SW + + Y +
Sbjct: 221 RCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHN 278
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
F E ++LF M +R N+ + + L A A + + D A
Sbjct: 279 GFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVA 338
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
+L+ MYSK G +E A +F I D+VSW+A+IA Q +D A++L +M
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK 398
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
PN T++S L+ CA V LG+ +H IK D +S+ A +I MY+KC S A +
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKA 458
Query: 411 YELMPKKDII 420
+E +P KD +
Sbjct: 459 FERLPIKDAV 468
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 170/337 (50%), Gaps = 3/337 (0%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
LH +I+ GF +F + L+ +Y C A + ++ D SW +++ Y NG
Sbjct: 223 LHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDES-SWGTMMAAYAHNG 279
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVAN 190
F +E L F+ M V+ N+ S L+A + DL G +H +V G D VA
Sbjct: 280 FFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVAT 339
Query: 191 TLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
+L+ MY+KCG+L + +LF +I VVSW+A+ + Y Q+ EA+ LF++M+R I+P
Sbjct: 340 SLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKP 399
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
N +L+ +L CAG+ + +A A++ MY+K GR A+ F
Sbjct: 400 NAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAF 459
Query: 311 EEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD 370
E + D V++NA+ G Q + A + MK G CP+ T+ L+ CA
Sbjct: 460 ERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYA 519
Query: 371 LGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
G ++ +IK DS+ VA LI+M++KC+ L+ A
Sbjct: 520 RGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 175/357 (49%), Gaps = 2/357 (0%)
Query: 65 LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALIS 124
L G+ +H + ++ G D S L+S+YSKCG A +L + DVV SWSA+I+
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVV-SWSAMIA 374
Query: 125 GYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
Y Q G EA+ F DM + +K N T SVL+ C+ +G+ +H ++ +S
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES 434
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV 244
+ A ++ MYAKCG+ + K F + V++NAL Y Q +A D++K M
Sbjct: 435 ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Query: 245 RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
G+ P+ ++ +L CA + + + A+AL++M++K +
Sbjct: 495 LHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Query: 305 NAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
A+ +F++ VSWN ++ G + H + A+A +MK PN T + ++A
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAA 614
Query: 364 AAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
A + +G +HS LI+ S V L+DMY+KC M+ + + + + K I+
Sbjct: 615 AELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIV 671
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 174/376 (46%), Gaps = 8/376 (2%)
Query: 47 KP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
KP ++ T++L C + LG +H + I+ + ++S+Y+KCGRF A K
Sbjct: 398 KPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALK 457
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
++ D V +++AL GY Q G +A + +M + GV + T +L+ C+
Sbjct: 458 AFERLPIKDAV-AFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCS 516
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF 224
D G V+G + GFDS+ VA+ L+ M+ KC L + LF S VSWN +
Sbjct: 517 DYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
+ Y+ EAV F++M +PN + I+ A A L
Sbjct: 577 NGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFC 636
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
N+LVDMY+K G IE++ F EI++ IVSWN +++ H A++L M
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKC 401
+ + P+ + S L AC G + G+++ + KI+ + + + ++D+ K
Sbjct: 697 QENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYAC--MVDLLGKA 754
Query: 402 EMLSDARRVYELMPKK 417
+ +A + M K
Sbjct: 755 GLFGEAVEMMRRMRVK 770
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 174/373 (46%), Gaps = 8/373 (2%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
PI+YTNLL K+ +++H LI G P N L++ YS R +R + D
Sbjct: 2 PINYTNLLLMLRECKNFRCLLQVHGSLIVSGLK--P--HNQLINAYSLFQRQDLSRVIFD 57
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCM-LGVKCNEFTFPSVLKACSIKKDL 167
+ VV+ W+++I GY + G +EAL F M G+ ++++F LKAC+ D
Sbjct: 58 SVRDPGVVL-WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDF 116
Query: 168 NMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
G ++H + G +SD ++ LV MY K L +R++F + VV+WN + S
Sbjct: 117 KKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGL 176
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
Q+ A+ LF +M + + SL ++ A + L S
Sbjct: 177 AQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK-SDVCRCLHGLVIKKGFIFA 235
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
FS+ L+DMY + A +VFEE+ D SW ++A + + L L + M++
Sbjct: 236 FSS-GLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNY 294
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
N +SAL+A A VG G +H ++ D VA L+ MYSKC L A
Sbjct: 295 DVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIA 354
Query: 408 RRVYELMPKKDII 420
+++ + +D++
Sbjct: 355 EQLFINIEDRDVV 367
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 129/290 (44%), Gaps = 7/290 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+ +L C G ++ +I+ GF + + L+++++KC A L D+
Sbjct: 504 TMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKC 563
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
VSW+ +++GY+ +G +EA+ F M + + N TF ++++A + L +G
Sbjct: 564 GFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVG 623
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
VH + GF S V N+LV MYAKCG + S K F I +VSWN + S Y
Sbjct: 624 MSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAH 683
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQ 287
AV LF M ++P+ S +L+AC AGL G +
Sbjct: 684 GLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEH 743
Query: 288 FSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDW 336
++ +VD+ K G AV + + + W A++ H CN W
Sbjct: 744 YA--CMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH-CNLW 790
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ F +++ N++ +L +GM +H+ LI+ GF N LV +Y+KCG
Sbjct: 598 EKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIES 657
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
+ K + +VSW+ ++S Y +G A+ F M +K + +F SVL AC
Sbjct: 658 SEKCFIE-ISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACR 716
Query: 163 IKKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSW 220
+ G+++ M +++ +V + K G G++ ++ + V SV W
Sbjct: 717 HAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVW 776
Query: 221 NALFS 225
AL +
Sbjct: 777 GALLN 781
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 181/367 (49%), Gaps = 11/367 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y+ L+ C++++++ G + HL G N L+++Y K A +L DQ
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ +V+ SW+ +IS Y + ++AL M V+ N +T+ SVL++C+ D+ M
Sbjct: 123 PQRNVI-SWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM- 180
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+H + G +SD FV + L+ ++AK G+ D+ +F +V + WN++ + Q+
Sbjct: 181 --LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
A++LFK M R G + +L+ +L AC GL D
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL--ALLELGMQAHVHIVKYDQDLILN 296
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
NALVDMY K G +E+A+ VF ++ D+++W+ +I+G Q+ + AL L MKSSG
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDA 407
PN TI L AC+ G + G + K ID + + +ID+ K L DA
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC--MIDLLGKAGKLDDA 414
Query: 408 RRVYELM 414
++ M
Sbjct: 415 VKLLNEM 421
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 146/287 (50%), Gaps = 5/287 (1%)
Query: 134 EALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLV 193
A+ A + + G+ + T+ ++K C + ++ G + G F+ N L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 194 VMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
MY K L D+ +LF + +V+SW + S Y + +A++L M+R +RPN +
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
+ S +L +C G+ S D F +AL+D+++K G E+A++VF+E+
Sbjct: 164 TYSSVLRSCNGM---SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
D + WN++I G Q+ +D AL L MK +G T++S L+AC + +LG
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 374 QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
Q H ++K D D + L+DMY KC L DA RV+ M ++D+I
Sbjct: 281 QAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F + T++L C L LGM+ H H+++ + D N LV +Y KCG A
Sbjct: 256 FIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDAL 313
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
++ +Q E D V++WS +ISG QNG+ +EAL F M G K N T VL ACS
Sbjct: 314 RVFNQMKERD-VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHA 372
Query: 165 KDLNMG-RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNA 222
L G M + G D ++ + K G+L D+ KL + P V+W
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 223 LF-SCYVQSDFCV 234
L +C VQ + +
Sbjct: 433 LLGACRVQRNMVL 445
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 181/377 (48%), Gaps = 21/377 (5%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+S+ L+ C S ++ G++LH +++ G LV Y KCG AR++ +
Sbjct: 143 VSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEA 202
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEF-----TFPSVLKACSIK 164
+ D+V+ W+AL+S YV NG EA F + ++G N F TF S+L AC I+
Sbjct: 203 VLDRDLVL-WNALVSSYVLNGMIDEA---FGLLKLMGSDKNRFRGDYFTFSSLLSACRIE 258
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
+ G+++H + + D VA L+ MYAK L D+R+ F S+V +VVSWNA+
Sbjct: 259 Q----GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMI 314
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
+ Q+ EA+ LF +M+ ++P+E + + +L++CA +
Sbjct: 315 VGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKF-SAIWEIKQVQAMVTKKGS 373
Query: 285 XDQFS-ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNE 343
D S AN+L+ YS+ G + A+ F I PD+VSW +VI H + +L +
Sbjct: 374 ADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFES 433
Query: 344 MKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI---KIDTDSDFFVAVGLIDMYSK 400
M P+ T L AC+ G G + + KI+ + + + LID+ +
Sbjct: 434 MLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTC--LIDLLGR 490
Query: 401 CEMLSDARRVYELMPKK 417
+ +A V MP +
Sbjct: 491 AGFIDEASDVLNSMPTE 507
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 169/361 (46%), Gaps = 22/361 (6%)
Query: 72 HAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN-- 129
H +++ G + +N L+ Y+K F A KL D+ ++V +W+ LI G +Q
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV-TWNILIHGVIQRDG 117
Query: 130 --------GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTG 181
GF + + F D V + +F +++ C+ ++ G ++H + V G
Sbjct: 118 DTNHRAHLGFCYLSRILFTD-----VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQG 172
Query: 182 FDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFK 241
+S F + +LV Y KCG + ++R++F +++ +V WNAL S YV + EA L K
Sbjct: 173 LESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 242 EMV--RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
M + R + F+ S +L+AC + G D A AL++MY+K
Sbjct: 233 LMGSDKNRFRGDYFTFSSLLSACR-IEQGK---QIHAILFKVSYQFDIPVATALLNMYAK 288
Query: 300 GGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSA 359
+ +A FE + ++VSWNA+I G Q+ A+ L +M P+ T +S
Sbjct: 289 SNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASV 348
Query: 360 LKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
L +CA +Q+ + + K + VA LI YS+ LS+A + + + D+
Sbjct: 349 LSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDL 408
Query: 420 I 420
+
Sbjct: 409 V 409
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 176/366 (48%), Gaps = 1/366 (0%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
+L C S ++ G LHA+ ++ + L+ +Y + G+ + ++ + +
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
V +W+A+I+G V G KE L F++M + +TF LKAC+ + + G+ +H
Sbjct: 174 AV-TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV 234
+V GF + VAN+L MY +CG++ D LF ++ VVSW +L Y + V
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEV 292
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
+AV+ F +M + PNE + + + +ACA L +N+++
Sbjct: 293 KAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMM 352
Query: 295 DMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVF 354
MYS G + +A +F+ + DI+SW+ +I G Q + + M+ SG P F
Sbjct: 353 KMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDF 412
Query: 355 TISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELM 414
++S L + + GRQ+H+ + + + V LI+MYSKC + +A ++
Sbjct: 413 ALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGET 472
Query: 415 PKKDII 420
+ DI+
Sbjct: 473 DRDDIV 478
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 166/365 (45%), Gaps = 3/365 (0%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV 115
L C + + G +H H+I GF N L ++Y++CG L + +E DV
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
V SW++LI Y + G +A+ F M V NE TF S+ AC+ L G ++H
Sbjct: 276 V-SWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHC 334
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVE 235
+ G + V+N+++ MY+ CG L + LF + ++SW+ + Y Q+ F E
Sbjct: 335 NVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEE 394
Query: 236 AVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVD 295
F M + G +P +F+L+ +L+ + + ++L++
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454
Query: 296 MYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFT 355
MYSK G I+ A +F E DIVS A+I G +H + A+ L + G P+ T
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVT 514
Query: 356 ISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDARR-VYEL 413
S L AC G DLG + + + G ++D+ + LSDA + + E+
Sbjct: 515 FISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEM 574
Query: 414 MPKKD 418
KKD
Sbjct: 575 SWKKD 579
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 166/340 (48%), Gaps = 6/340 (1%)
Query: 83 DPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDM 142
DP+ +HL SL + G AR++ D+ D+V SW+++I YV EAL+ F+ M
Sbjct: 42 DPN--SHLRSLIN-AGNLRAARQVFDKMPHGDIV-SWTSIIKRYVTANNSDEALILFSAM 97
Query: 143 CML--GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCG 200
++ V + VLKAC ++ G +H +V T S +V ++L+ MY + G
Sbjct: 98 RVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVG 157
Query: 201 QLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
++ S ++F + + V+W A+ + V + E + F EM R + ++ +I L
Sbjct: 158 KIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALK 217
Query: 261 ACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVS 320
ACAGLR AN+L MY++ G +++ + +FE ++ D+VS
Sbjct: 218 ACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS 277
Query: 321 WNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI 380
W ++I + A+ +M++S PN T +S ACA++ G QLH ++
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL 337
Query: 381 KIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ + V+ ++ MYS C L A +++ M +DII
Sbjct: 338 SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDII 377
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 136/287 (47%), Gaps = 9/287 (3%)
Query: 48 PP--ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
PP ++ ++ S C + L G +LH +++ G + S N ++ +YS CG A
Sbjct: 307 PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV 366
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
L Q ++SWS +I GY Q GFG+E F+ M G K +F S+L
Sbjct: 367 LF-QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMA 425
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
+ GR+VH +++ G + + V ++L+ MY+KCG + ++ +FG +VS A+ +
Sbjct: 426 VIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMIN 485
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC---AGLRNGSXXXXXXXXXXXXX 282
Y + EA+DLF++ ++ G RP+ + +L AC L G
Sbjct: 486 GYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMR 545
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGC 328
+ + +VD+ + GR+ +A + E++ D V W ++ C
Sbjct: 546 PAKEHY--GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIAC 590
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK- 345
+F N+ + G + A VF+++ H DIVSW ++I V +D AL L + M+
Sbjct: 40 KFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRV 99
Query: 346 -SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
P+ +S LKAC G LH+ +K S +V L+DMY + +
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 405 SDARRVYELMPKKDII 420
+ RV+ MP ++ +
Sbjct: 160 DKSCRVFSEMPFRNAV 175
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 174/368 (47%), Gaps = 14/368 (3%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ N + C L ELH + ++ F ++ N V+ Y+KCG YA++ V
Sbjct: 396 VTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR-VFH 454
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ V SW+ALI G+ Q+ + +L A M + G+ + FT S+L ACS K L +
Sbjct: 455 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 514
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G++VHG + + D FV +++ +Y CG+L + LF ++ S+VSWN + + Y+Q
Sbjct: 515 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 574
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ F A+ +F++MV GI+ S+ + AC+ L + D F
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 634
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
A +L+DMY+K G I + VF + SWNA+I G H A+ L EM+ +G
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 694
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDT-DSDFFVAVGL------IDMYSKCE 402
P+ T L AC G +H L +D S F + L IDM +
Sbjct: 695 NPDDLTFLGVLTACNHSGL------IHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 748
Query: 403 MLSDARRV 410
L A RV
Sbjct: 749 QLDKALRV 756
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 146/291 (50%), Gaps = 10/291 (3%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P S+T +LLS C KSL LG E+H +IR D ++SLY CG + L
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
D + E +VSW+ +I+GY+QNGF AL F M + G++ + V ACS+
Sbjct: 554 FD-AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
L +GR+ H ++ + D F+A +L+ MYAK G + S K+F + S SWNA+
Sbjct: 613 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXX 283
Y EA+ LF+EM R G P++ + +L AC +GL G
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVF-EEITHP-DIVSWNAVIAGCVQHE 332
++ ++DM + G+++ A+ V EE++ D+ W ++++ C H+
Sbjct: 733 NLKHYA--CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 781
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 177/376 (47%), Gaps = 7/376 (1%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y ++ C + +G+ +H +++ G D N LVS Y G A +L D
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCML----GVKCNEFTFPSVLKACSIKKD 166
E ++V SW+++I + NGF +E+ L +M + T +VL C+ +++
Sbjct: 249 PERNLV-SWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
+ +G+ VHG +V D + + N L+ MY+KCG + +++ +F +VVSWN +
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 227 YVQSDFCVEAVDLFKEMVRGG--IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
+ D+ ++M+ GG ++ +E ++ + C
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
++ ANA V Y+K G + A VF I + SWNA+I G Q +L +M
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
K SG P+ FT+ S L AC+ + LG+++H +I+ + D FV + ++ +Y C L
Sbjct: 488 KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547
Query: 405 SDARRVYELMPKKDII 420
+ +++ M K ++
Sbjct: 548 CTVQALFDAMEDKSLV 563
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 175/376 (46%), Gaps = 3/376 (0%)
Query: 44 SFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
+F + +L C + + LG +H ++ + N L+ +YSKCG A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG--VKCNEFTFPSVLKAC 161
+ + + +VV SW+ ++ G+ G M G VK +E T + + C
Sbjct: 347 QMIFKMNNNKNVV-SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWN 221
+ L +++H S+ F + VAN V YAKCG L ++++F I + +V SWN
Sbjct: 406 FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 465
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
AL + QS+ ++D +M G+ P+ F++ +L+AC+ L++
Sbjct: 466 ALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN 525
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALL 341
D F +++ +Y G + A+F+ + +VSWN VI G +Q+ D AL +
Sbjct: 526 WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 585
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
+M G ++ AC+ + LGR+ H+ +K + D F+A LIDMY+K
Sbjct: 586 RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 402 EMLSDARRVYELMPKK 417
++ + +V+ + +K
Sbjct: 646 GSITQSSKVFNGLKEK 661
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 173/374 (46%), Gaps = 11/374 (2%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFG--FSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
LL K + +G ++H L+ +D ++++Y+ CG +R + D +
Sbjct: 90 LLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD-ALR 147
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMC-MLGVKCNEFTFPSVLKACSIKKDLNMGR 171
+ + W+A+IS Y +N E L F +M + + FT+P V+KAC+ D+ +G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
VHG+ V TG D FV N LV Y G + D+ +LF + ++VSWN++ + +
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 232 FCVEAVDLFKEMVR----GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
F E+ L EM+ G P+ +L +L CA R +
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
NAL+DMYSK G I NA +F+ + ++VSWN ++ G +L +M +
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 348 G--ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLS 405
G + TI +A+ C F ++LH +K + + VA + Y+KC LS
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 406 DARRVYELMPKKDI 419
A+RV+ + K +
Sbjct: 448 YAQRVFHGIRSKTV 461
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS-GACP 351
++ MY+ G +++ VF+ + ++ WNAVI+ ++E D L EM S+ P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
+ FT +KACA + +G +H ++K D FV L+ Y ++DA +++
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 412 ELMPKKDII 420
++MP+++++
Sbjct: 246 DIMPERNLV 254
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 180/393 (45%), Gaps = 67/393 (17%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N +VS ++K G AR+L + E DVV + ++L+ GY+ NG+ +EAL F + L
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVV-TLNSLLHGYILNGYAEEALRLFKE---LNF 183
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQL----- 202
+ T +VLKAC+ + L G+++H ++ G + D + ++LV +YAKCG L
Sbjct: 184 SADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASY 243
Query: 203 --------------------------GDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEA 236
+SR LF V+ WN++ S Y+ ++ +EA
Sbjct: 244 MLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEA 303
Query: 237 VDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
+ LF EM R R + +L+ ++NAC GL D A+ L+DM
Sbjct: 304 LVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDM 362
Query: 297 YSK-------------------------------GGRIENAVAVFEEITHPDIVSWNAVI 325
YSK GRI++A VFE I + ++SWN++
Sbjct: 363 YSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMT 422
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTD 385
G Q+ C L ++M + ++SS + ACA++ +LG Q+ + + D
Sbjct: 423 NGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLD 482
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
SD V+ LID+Y KC + RRV++ M K D
Sbjct: 483 SDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 197/437 (45%), Gaps = 69/437 (15%)
Query: 44 SFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
+F+ I+ T +L C ++L G ++HA ++ G D + LV++Y+KCG A
Sbjct: 182 NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMA 241
Query: 104 RKLVDQSTETD------------------------------VVVSWSALISGYVQNGFGK 133
+++Q E D V+ W+++ISGY+ N
Sbjct: 242 SYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKM 301
Query: 134 EALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLV 193
EAL+ FN+M + + T +V+ AC L G+++H + G D VA+TL+
Sbjct: 302 EALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLL 360
Query: 194 VMYAK-------------------------------CGQLGDSRKLFGSIVAPSVVSWNA 222
MY+K CG++ D++++F I S++SWN+
Sbjct: 361 DMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNS 420
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
+ + + Q+ VE ++ F +M + + +E SLS +++ACA + +
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVG 480
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLN 342
DQ +++L+D+Y K G +E+ VF+ + D V WN++I+G + A+ L
Sbjct: 481 LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFK 540
Query: 343 EMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID----TDSDFFVAVGLIDMY 398
+M +G P T L AC G + GR+L + K+D D + F ++D+
Sbjct: 541 KMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESM-KVDHGFVPDKEHFSC--MVDLL 597
Query: 399 SKCEMLSDARRVYELMP 415
++ + +A + E MP
Sbjct: 598 ARAGYVEEAINLVEEMP 614
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 149/310 (48%), Gaps = 38/310 (12%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGF-------------------------------SHD 83
+++ C+ L G ++H H +FG S+D
Sbjct: 324 VINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYD 383
Query: 84 PSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMC 143
N ++ +Y CGR A+++ ++ E ++SW+++ +G+ QNG E L F+ M
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFER-IENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 144 MLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLG 203
L + +E + SV+ AC+ L +G +V + + G DSD V+++L+ +Y KCG +
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 204 DSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC- 262
R++F ++V V WN++ S Y + EA+DLFK+M GIRP + + ++L AC
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562
Query: 263 -AGL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP-DIV 319
GL G + FS +VD+ ++ G +E A+ + EE+ D
Sbjct: 563 YCGLVEEGRKLFESMKVDHGFVPDKEHFS--CMVDLLARAGYVEEAINLVEEMPFDVDGS 620
Query: 320 SWNAVIAGCV 329
W++++ GCV
Sbjct: 621 MWSSILRGCV 630
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 172/401 (42%), Gaps = 76/401 (18%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGF-SHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
Y LL C + TL + + L++ GF S NHL+ +YS+ G+ G AR L D+
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ + SW+ +I GY+ +G K L F DM P
Sbjct: 89 PDRNYF-SWNTMIEGYMNSG-EKGTSLRFFDM-----------MP--------------- 120
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+ DG+ N +V +AK G+L +R+LF ++ VV+ N+L Y+ +
Sbjct: 121 ------------ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
+ EA+ LFKE+ + +L+ +L ACA L D
Sbjct: 169 GYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN 225
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPD-------------------------------IV 319
++LV++Y+K G + A + E+I PD ++
Sbjct: 226 SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 320 SWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL 379
WN++I+G + + AL L NEM++ + T+++ + AC +GF + G+Q+H
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMRNETR-EDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 380 IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
K D VA L+DMYSKC +A +++ + D I
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTI 385
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 187/405 (46%), Gaps = 43/405 (10%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG----YARKLV 107
Y+ +S K+ +LH+ I G + +P+F+ L + C R G YA KL
Sbjct: 34 YSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFW--CSRLGGHVSYAYKLF 91
Query: 108 DQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD- 166
+ E DVVV W+ +I G+ + E + + +M GV + TFP +L +K+D
Sbjct: 92 VKIPEPDVVV-WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNG--LKRDG 148
Query: 167 --LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
L G+K+H V G S+ +V N LV MY+ CG + +R +F V SWN +
Sbjct: 149 GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMI 208
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
S Y + E+++L EM R + P +L ++L+AC+ +++
Sbjct: 209 SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH------------- 331
NALV+ Y+ G ++ AV +F + D++SW +++ G V+
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 332 ------------------ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
C + +L + EM+S+G P+ FT+ S L ACA +G ++G
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 374 QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
+ + + K +D V LIDMY KC A++V+ M ++D
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRD 433
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 167/384 (43%), Gaps = 33/384 (8%)
Query: 64 SLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALI 123
+L G +LH H+++FG + +N LV +YS CG AR + D+ + D V SW+ +I
Sbjct: 150 ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED-VFSWNLMI 208
Query: 124 SGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD 183
SGY + +E++ +M V T VL ACS KD ++ ++VH +
Sbjct: 209 SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV--------- 234
+ N LV YA CG++ + ++F S+ A V+SW ++ YV+
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 235 ----------------------EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX 272
E++++F+EM G+ P+EF++ +L ACA L +
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 273 XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHE 332
D NAL+DMY K G E A VF ++ D +W A++ G +
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 333 CNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV 392
A+ + +M+ P+ T L AC G D R+ + + V
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY 508
Query: 393 G-LIDMYSKCEMLSDARRVYELMP 415
G ++DM + ++ +A + MP
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMP 532
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 15/279 (5%)
Query: 150 NEFT-FPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD---- 204
N+++ F S+L C K + +++H S+ G + L V + C +LG
Sbjct: 32 NDYSRFISILGVC---KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFW--CSRLGGHVSY 86
Query: 205 SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG 264
+ KLF I P VV WN + + + D E V L+ M++ G+ P+ + +LN
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLK- 145
Query: 265 LRNGSXXXXXXXX---XXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSW 321
R+G + + NALV MYS G ++ A VF+ D+ SW
Sbjct: 146 -RDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSW 204
Query: 322 NAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
N +I+G + + + ++ LL EM+ + P T+ L AC+ V KDL +++H + +
Sbjct: 205 NLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE 264
Query: 382 IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
T+ + L++ Y+ C + A R++ M +D+I
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 16/306 (5%)
Query: 46 TKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
T+P + N L A+ M++ + R + D +V Y + G AR
Sbjct: 267 TEPSLRLENALVNAYAACG---EMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
DQ D + SW+ +I GY++ G E+L F +M G+ +EFT SVL AC+
Sbjct: 324 YFDQMPVRDRI-SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
L +G + +D V N L+ MY KCG ++K+F + +W A+
Sbjct: 383 SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX 285
+ EA+ +F +M I+P++ + +L+AC N S
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC----NHSGMVDQARKFFAKMRSD 498
Query: 286 DQFSAN-----ALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWALA 339
+ + +VDM + G ++ A + ++ +P+ + W A++ H ND +A
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLH--NDEPMA 556
Query: 340 LLNEMK 345
L K
Sbjct: 557 ELAAKK 562
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 178/375 (47%), Gaps = 16/375 (4%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
Q F+ + NLL C ++ G +H + G D +N L+S YSKC G
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 103 A----RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVL 158
A R++ D+ST VSW+ +I Y Q+G +EA+ F +M V+ + T ++L
Sbjct: 205 AEVLFREMKDKST-----VSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL 259
Query: 159 KACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVV 218
A + L H + V G +D V +LV Y++CG L + +L+ S S+V
Sbjct: 260 SAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIV 313
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
++ SCY + AV F + + ++ + +L IL+ C +
Sbjct: 314 GLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYA 373
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL 338
N L+ MYSK +E + +FE++ ++SWN+VI+GCVQ A
Sbjct: 374 IKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAF 433
Query: 339 ALLNEMK-SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDM 397
+ ++M + G P+ TI+S L C+ + +LG++LH ++ + +++ FV LIDM
Sbjct: 434 EVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDM 493
Query: 398 YSKCEMLSDARRVYE 412
Y+KC A V++
Sbjct: 494 YAKCGNEVQAESVFK 508
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 8/334 (2%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P++ NLLS V+ + L H +++ G +D S LV YS+CG A +L
Sbjct: 252 PVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY- 304
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
S + D +V ++++S Y + G A++ F+ L +K + +L C ++
Sbjct: 305 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
+G +HG ++ +G + V N L+ MY+K + LF + ++SWN++ S V
Sbjct: 365 IGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCV 424
Query: 229 QSDFCVEAVDLFKE-MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
QS A ++F + M+ GG+ P+ +++ +L C+ L + +
Sbjct: 425 QSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENEN 484
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
F AL+DMY+K G A +VF+ I P +WN++I+G AL+ EM+
Sbjct: 485 FVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREK 544
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
G P+ T L AC GF D G+ +IK
Sbjct: 545 GLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 578
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 159/361 (44%), Gaps = 27/361 (7%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
++ HL + G + L++LY K G A+ L D+ E D VV W+ALI GY +N
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVV-WNALICGYSRN 129
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
G+ +A F M G + T ++L C ++ GR VHG++ +G + D V
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIR 249
N L+ Y+KC +LG + LF + S VSWN + Y QS EA+ +FK M +
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 250 PNEFSLSIILNA--------CAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG 301
+ ++ +L+A C ++ G D +LV YS+ G
Sbjct: 250 ISPVTIINLLSAHVSHEPLHCLVVKCG--------------MVNDISVVTSLVCAYSRCG 295
Query: 302 RIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTIS--SA 359
+ +A ++ IV ++++ E D +A++ K+ C + ++
Sbjct: 296 CLVSAERLYASAKQDSIVGLTSIVS--CYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGI 353
Query: 360 LKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
L C D+G LH IK + V GLI MYSK + + ++E + + +
Sbjct: 354 LHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPL 413
Query: 420 I 420
I
Sbjct: 414 I 414
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 178/366 (48%), Gaps = 9/366 (2%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTET 113
+LL ++S G++LH ++++ G S P N+L++ YSK +R+ + S +
Sbjct: 20 DLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQK 79
Query: 114 DVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
S++IS + QN +L M ++ ++ PS K+C+I ++GR V
Sbjct: 80 SSTTW-SSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSV 138
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFC 233
H +S+ TG+D+D FV ++LV MYAKCG++ +RK+F + +VV+W+ + Y Q
Sbjct: 139 HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGEN 198
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
EA+ LFKE + + N++S S +++ CA F ++L
Sbjct: 199 EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSL 258
Query: 294 VDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNV 353
V +YSK G E A VF E+ ++ WNA++ QH + L MK SG PN
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 354 FTISSALKACAAVGFKDLGR----QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
T + L AC+ G D GR Q+ I+ TD + L+DM + L +A
Sbjct: 319 ITFLNVLNACSHAGLVDEGRYYFDQMKESRIE-PTDKHY---ASLVDMLGRAGRLQEALE 374
Query: 410 VYELMP 415
V MP
Sbjct: 375 VITNMP 380
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 148/286 (51%), Gaps = 12/286 (4%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
+LS+C +G +H ++ G+ D + LV +Y+KCG YARK+ D+ + +
Sbjct: 128 ILSRC------DIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRN 181
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
VV +WS ++ GY Q G +EAL F + + N+++F SV+ C+ L +GR++H
Sbjct: 182 VV-TWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIH 240
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV 234
G+S+ + FDS FV ++LV +Y+KCG + ++F + ++ WNA+ Y Q
Sbjct: 241 GLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQ 300
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
+ ++LFK M G++PN + +LNAC AGL + ++ +
Sbjct: 301 KVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYA--S 358
Query: 293 LVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWA 337
LVDM + GR++ A+ V + P W A++ C H+ + A
Sbjct: 359 LVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELA 404
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 124/250 (49%)
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G ++HG V +G VAN L+ Y+K DSR+ F S +W+++ SC+ Q
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
++ +++ K+M+ G +RP++ L +CA L D F
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
++LVDMY+K G I A +F+E+ ++V+W+ ++ G Q N+ AL L E
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
N ++ SS + CA +LGRQ+H IK DS FV L+ +YSKC + A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 410 VYELMPKKDI 419
V+ +P K++
Sbjct: 274 VFNEVPVKNL 283
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 74/131 (56%)
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
AN L++ YSK ++ FE+ +W+++I+ Q+E +L L +M +
Sbjct: 53 ANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNL 112
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
P+ + SA K+CA + D+GR +H +K D+D FV L+DMY+KC + AR+
Sbjct: 113 RPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARK 172
Query: 410 VYELMPKKDII 420
+++ MP+++++
Sbjct: 173 MFDEMPQRNVV 183
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
F++ S+++++S C S L LG ++H I+ F + LVSLYSKCG
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
A ++ ++ ++ + W+A++ Y Q+ ++ + F M + G+K N TF +VL AC
Sbjct: 270 GAYQVFNEVPVKNLGI-WNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSW 220
S ++ GR + + +LV M + G+L ++ ++ ++ + P+ W
Sbjct: 329 SHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVW 388
Query: 221 NALF-SCYVQSD 231
AL SC V +
Sbjct: 389 GALLTSCTVHKN 400
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 185/420 (44%), Gaps = 50/420 (11%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTL---------------GMELHAHLIRFGFSHDPSFR 87
+SFTK + L Q + + TL G ++H + ++ G D
Sbjct: 25 KSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVS 84
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCML-G 146
N L+ +Y+ G+ K+ D+ + DVV SW+ LIS YV NG ++A+ F M
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVV-SWNGLISSYVGNGRFEDAIGVFKRMSQESN 143
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+K +E T S L ACS K+L +G +++ VVT F+ + N LV M+ KCG L +R
Sbjct: 144 LKFDEGTIVSTLSACSALKNLEIGERIYRF-VVTEFEMSVRIGNALVDMFCKCGCLDKAR 202
Query: 207 KLFGSI-------------------------------VAPSVVSWNALFSCYVQSDFCVE 235
+F S+ VV W A+ + YVQ + E
Sbjct: 203 AVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDE 262
Query: 236 AVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVD 295
A++LF+ M GIRP+ F L +L CA D+ ALVD
Sbjct: 263 ALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVD 322
Query: 296 MYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFT 355
MY+K G IE A+ VF EI D SW ++I G + + AL L EM++ G + T
Sbjct: 323 MYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAIT 382
Query: 356 ISSALKACAAVGFKDLGRQL-HSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELM 414
+ L AC GF GR++ HS + + LID+ + +L +A + + M
Sbjct: 383 FVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 147/317 (46%), Gaps = 33/317 (10%)
Query: 134 EALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLV 193
+ L F ++ G+ + FT P VLK+ + + G KVHG +V G + D +V+N+L+
Sbjct: 29 KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLM 88
Query: 194 VMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR-GGIRPNE 252
MYA G++ + K+F + VVSWN L S YV + +A+ +FK M + ++ +E
Sbjct: 89 GMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDE 148
Query: 253 FSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK------------- 299
++ L+AC+ L+N + NALVDM+ K
Sbjct: 149 GTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI-GNALVDMFCKCGCLDKARAVFDS 207
Query: 300 ------------------GGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALL 341
GRI+ A +FE D+V W A++ G VQ D AL L
Sbjct: 208 MRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELF 267
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
M+++G P+ F + S L CA G + G+ +H + + D V L+DMY+KC
Sbjct: 268 RCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC 327
Query: 402 EMLSDARRVYELMPKKD 418
+ A V+ + ++D
Sbjct: 328 GCIETALEVFYEIKERD 344
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 6/208 (2%)
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
PS++ +N + + + LF E+ G+ P+ F+L ++L + LR
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECN 334
D + +N+L+ MY+ G+IE VF+E+ D+VSWN +I+ V +
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 335 DWALALLNEM-KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
+ A+ + M + S + TI S L AC+A+ ++G +++ ++ T+ + V +G
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV---TEFEMSVRIG 185
Query: 394 --LIDMYSKCEMLSDARRVYELMPKKDI 419
L+DM+ KC L AR V++ M K++
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNV 213
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 40 QCFQSFTKPPISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKC 97
+C Q+ P ++ +LL+ C + +L G +H ++ + D LV +Y+KC
Sbjct: 268 RCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC 327
Query: 98 GRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSV 157
G A ++ + E D SW++LI G NG AL + +M +GV+ + TF +V
Sbjct: 328 GCIETALEVFYEIKERDTA-SWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAV 386
Query: 158 LKACSIKKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPS 216
L AC+ + GRK+ H M+ + L+ + + G L ++ +L + S
Sbjct: 387 LTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGES 446
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 52/105 (49%)
Query: 316 PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQL 375
P ++ +N ++ + LAL E++ G P+ FT+ LK+ + G ++
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 376 HSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
H +K + D +V+ L+ MY+ + +V++ MP++D++
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVV 113
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 168/338 (49%), Gaps = 8/338 (2%)
Query: 64 SLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALI 123
+L G +H + R GFS+D + ++ +Y+K YAR++ D + + V +WSA+I
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEV-TWSAMI 278
Query: 124 SGYVQNGFGKEALLAFNDMCMLG--VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTG 181
GYV+N KEA F M + +L C+ DL+ GR VH +V G
Sbjct: 279 GGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAG 338
Query: 182 FDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFK 241
F D V NT++ YAK G L D+ + F I V+S+N+L + V + E+ LF
Sbjct: 339 FILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFH 398
Query: 242 EMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG 301
EM GIRP+ +L +L AC+ L + NAL+DMY+K G
Sbjct: 399 EMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 302 RIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALK 361
+++ A VF+ + DIVSWN ++ G H AL+L N M+ +G P+ T+ + L
Sbjct: 459 KLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILS 518
Query: 362 ACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYS 399
AC+ G D G+QL + + + D F + ID Y+
Sbjct: 519 ACSHSGLVDEGKQLFNSMSRGD-----FNVIPRIDHYN 551
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 183/379 (48%), Gaps = 10/379 (2%)
Query: 49 PISYTN--LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P YT +L C +++ G +H+H+ F+ D LV Y+KCG A K+
Sbjct: 101 PTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKV 160
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCML-GVKCNEFTFPSVLKACSIKK 165
D+ + D+V +W+A+ISG+ + + + F DM + G+ N T + A
Sbjct: 161 FDEMPKRDMV-AWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
L G+ VHG GF +D V ++ +YAK + +R++F + V+W+A+
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 226 CYVQSDFCVEAVDLFKEMVRGG----IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
YV+++ EA ++F +M+ + P ++ +IL CA + S
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALL 341
D N ++ Y+K G + +A F EI D++S+N++I GCV + + + L
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
+EM++SG P++ T+ L AC+ + G H + + + L+DMY+KC
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKC 457
Query: 402 EMLSDARRVYELMPKKDII 420
L A+RV++ M K+DI+
Sbjct: 458 GKLDVAKRVFDTMHKRDIV 476
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 174/380 (45%), Gaps = 17/380 (4%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPS-FRNHLVSLYSKCGRFGYARKLVDQS 110
+ +LL C+ S++L LG +H HL++ + S +L LY+ C AR + D+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 111 TETDV-VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ ++W +I Y N F ++AL + M GV+ ++T+P VLKAC+ + ++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G+ +H + F +D +V LV YAKCG+L + K+F + +V+WNA+ S +
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 230 SDFCVEAVDLFKEMVR-GGIRPNEFSLSII------LNACAGLRNGSXXXXXXXXXXXXX 282
+ + LF +M R G+ PN LS I L LR G
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPN---LSTIVGMFPALGRAGALREGK---AVHGYCTRMG 235
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLN 342
D ++D+Y+K I A VF+ + V+W+A+I G V++E A +
Sbjct: 236 FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFF 295
Query: 343 EM--KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSK 400
+M + A I L CA G GR +H +K D V +I Y+K
Sbjct: 296 QMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAK 355
Query: 401 CEMLSDARRVYELMPKKDII 420
L DA R + + KD+I
Sbjct: 356 YGSLCDAFRQFSEIGLKDVI 375
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 35/372 (9%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P++ +L C L+ G +H + ++ GF D + +N ++S Y+K G A +
Sbjct: 308 PVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFS 367
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+ DV+ S+++LI+G V N +E+ F++M G++ + T VL ACS L
Sbjct: 368 EIGLKDVI-SYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALG 426
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G HG VV G+ + + N L+ MY KCG+L ++++F ++ +VSWN + +
Sbjct: 427 HGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFG 486
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
EA+ LF M G+ P+E +L IL+AC
Sbjct: 487 IHGLGKEALSLFNSMQETGVNPDEVTLLAILSAC-------------------------- 520
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
S + LVD +G ++ N+++ + P I +N + + D A +N+M
Sbjct: 521 SHSGLVD---EGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFE- 576
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
P++ + + L AC +LG ++ + + ++ V L + YS E DA
Sbjct: 577 --PDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVL--LSNTYSAAERWEDAA 632
Query: 409 RVYELMPKKDII 420
R+ + K+ ++
Sbjct: 633 RIRMIQKKRGLL 644
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 188/400 (47%), Gaps = 38/400 (9%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK---- 105
++ +L ++ ++LG ++H +I+ GF + L+ +Y+ G A+K
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 106 LVDQST--------------------------ETDVVVSWSALISGYVQNGFGKEALLAF 139
L D++T E D V SW+A+I G QNG KEA+ F
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECF 258
Query: 140 NDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC 199
+M + G+K +++ F SVL AC +N G+++H + T F +V + L+ MY KC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 200 GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
L ++ +F + +VVSW A+ Y Q+ EAV +F +M R GI P+ ++L +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIV 319
+ACA + + +N+LV +Y K G I+++ +F E+ D V
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
Query: 320 SWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL 379
SW A+++ Q + L ++M G P+ T++ + AC+ G + G++ +
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 380 IKIDTDSDFFVAVG----LIDMYSKCEMLSDARRVYELMP 415
++ ++G +ID++S+ L +A R MP
Sbjct: 499 T---SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 162/335 (48%), Gaps = 17/335 (5%)
Query: 40 QCF-----QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY 94
+CF Q + ++L C ++ G ++HA +IR F + L+ +Y
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 95 SKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTF 154
KC YA+ + D+ + +VV SW+A++ GY Q G +EA+ F DM G+ + +T
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVV-SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 155 PSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA 214
+ AC+ L G + HG ++ +G V+N+LV +Y KCG + DS +LF +
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXX 271
VSW A+ S Y Q VE + LF +MV+ G++P+ +L+ +++AC AGL G
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH-PDIVSWNAVIAGCVQ 330
+S ++D++S+ GR+E A+ + PD + W +++ C
Sbjct: 495 FKLMTSEYGIVPSIGHYS--CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 331 H---ECNDWALALLNEMKSSGACPNVFTISSALKA 362
E WA L E+ P +T+ S++ A
Sbjct: 553 KGNLEIGKWAAESLIELDPHH--PAGYTLLSSIYA 585
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 163/364 (44%), Gaps = 32/364 (8%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCM-LG 146
N+L+ YSK G ++ + D V +W+ LI GY +G A+ A+N M
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGV-TWNVLIEGYSLSGLVGAAVKAYNTMMRDFS 134
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
T ++LK S +++G+++HG + GF+S V + L+ MYA G + D++
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 207 KLF---------------GSIVA---------------PSVVSWNALFSCYVQSDFCVEA 236
K+F G ++A VSW A+ Q+ EA
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254
Query: 237 VDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
++ F+EM G++ +++ +L AC GL + + +AL+DM
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 297 YSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTI 356
Y K + A VF+ + ++VSW A++ G Q + A+ + +M+ SG P+ +T+
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 357 SSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPK 416
A+ ACA V + G Q H I V+ L+ +Y KC + D+ R++ M
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 417 KDII 420
+D +
Sbjct: 435 RDAV 438
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNE-MKS 346
FS N L+ YSK G I + FE++ D V+WN +I G A+ N M+
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSD 406
A T+ + LK ++ G LG+Q+H +IK+ +S V L+ MY+ +SD
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 407 ARRVYELMPKKDII 420
A++V+ + ++ +
Sbjct: 193 AKKVFYGLDDRNTV 206
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 185/410 (45%), Gaps = 46/410 (11%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
FT PP LL C + G LHA +++ GF D LVS+Y K + A
Sbjct: 32 FTFPP-----LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDAL 86
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
K++D+ E + S +A +SG ++NGF ++A F D + G N T SVL C
Sbjct: 87 KVLDEMPERGIA-SVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG-- 143
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
D+ G ++H +++ +GF+ + +V +LV MY++CG+ + ++F + SVV++NA
Sbjct: 144 -DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 225 SCYVQSDFCVEAVDLFKEMVR-GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXX 283
S +++ +F M + PN+ + + ACA L N
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 284 XXDQFSANALVDMYSK--------------------------------GGRIENAVAVFE 311
+ AL+DMYSK G+ E AV +FE
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 312 EI----THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
++ PD +WN++I+G Q A M S P++ ++S L AC+ +
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIW 382
Query: 368 FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
G+++H +IK + D FV LIDMY KC + S ARR+++ K
Sbjct: 383 TLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPK 432
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 5/273 (1%)
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
N+FTFP +LK+C+ D+ GR +H V TGF D F A LV MY K Q+ D+ K+
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGS 269
+ + S NA S +++ FC +A +F + G N +++ +L C + G
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG- 148
Query: 270 XXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCV 329
+ + +LV MYS+ G A +FE++ H +V++NA I+G +
Sbjct: 149 --MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLM 206
Query: 330 QHECNDWALALLNEMKS-SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDF 388
++ + ++ N M+ S PN T +A+ ACA++ GRQLH ++K + +
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFET 266
Query: 389 FVAVGLIDMYSKCEMLSDARRVY-ELMPKKDII 420
V LIDMYSKC A V+ EL +++I
Sbjct: 267 MVGTALIDMYSKCRCWKSAYIVFTELKDTRNLI 299
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 185/419 (44%), Gaps = 48/419 (11%)
Query: 42 FQSFTKPPISYTNLLSQCVAS-----KSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSK 96
F+ F +S + + S VAS + GM+LH ++ GF + LVS+YS+
Sbjct: 117 FRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSR 176
Query: 97 CGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVK-CNEFTFP 155
CG + A ++ ++ VV +++A ISG ++NG FN M + N+ TF
Sbjct: 177 CGEWVLAARMFEKVPHKSVV-TYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFV 235
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC----------GQLGDS 205
+ + AC+ +L GR++HG+ + F + V L+ MY+KC +L D+
Sbjct: 236 NAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDT 295
Query: 206 RKL--FGSIVA------------------------PSVVSWNALFSCYVQSDFCVEAVDL 239
R L + S+++ P +WN+L S + Q +EA
Sbjct: 296 RNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKF 355
Query: 240 FKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
F+ M+ + P+ L+ +L+AC+ + D F +L+DMY K
Sbjct: 356 FERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMK 415
Query: 300 GGRIENAVAVFE--EITHPDIVSWNAVIAGCVQH-ECNDWALALLNEMKSSGACPNVFTI 356
G A +F+ E D V WN +I+G +H EC A+ + ++ P++ T
Sbjct: 416 CGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECES-AIEIFELLREEKVEPSLATF 474
Query: 357 SSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYELM 414
++ L AC+ G + G Q+ + + +G +ID+ + L +A+ V + M
Sbjct: 475 TAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 154/364 (42%), Gaps = 47/364 (12%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
F S +++ N ++ C + +L G +LH +++ F + L+ +YSKC +
Sbjct: 224 FSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWK 283
Query: 102 YA----------RKLVDQST-----------ETDVVV--------------SWSALISGY 126
A R L+ ++ ET V + +W++LISG+
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF 343
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
Q G EA F M + + + S+L ACS L G+++HG + + D
Sbjct: 344 SQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDI 403
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPS--VVSWNALFSCYVQSDFCVEAVDLFKEMV 244
FV +L+ MY KCG +R++F V WN + S Y + C A+++F+ +
Sbjct: 404 FVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLR 463
Query: 245 RGGIRPNEFSLSIILNACA---GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG 301
+ P+ + + +L+AC+ + GS + ++D+ + G
Sbjct: 464 EEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHI--GCMIDLLGRSG 521
Query: 302 RIENAVAVFEEITHPDIVSWNAVIAGCVQH---ECNDWALALLNEMKSSGACPNVFTISS 358
R+ A V ++++ P +++++ C QH + A L E++ P F I S
Sbjct: 522 RLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAP--FVILS 579
Query: 359 ALKA 362
++ A
Sbjct: 580 SIYA 583
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
PN FT LK+CA +G GR LH+ ++K D F A L+ MY K + ++DA +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 411 YELMPKKDI 419
+ MP++ I
Sbjct: 89 LDEMPERGI 97
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 189/386 (48%), Gaps = 26/386 (6%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIR--FGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
+Y L C ++L G+ LH H++ + +S + N L+++Y+KCG YAR++ D
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
E + VVSW+ALI+GYVQ G +E F+ M + NEFT SVL +C +
Sbjct: 121 TMPERN-VVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCRYEP--- 175
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKC---GQLGDSRKLFGSIVAPSVVSWNALFS 225
G++VHG+++ G +VAN ++ MY +C ++ +F +I ++V+WN++ +
Sbjct: 176 -GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIA 234
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX---------XXXX 276
+ + +A+ +F M G+ F + +LN C+ L S
Sbjct: 235 AFQCCNLGKKAIGVFMRMHSDGV---GFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHS 291
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGR-IENAVAVFEEITH-PDIVSWNAVIAGCVQHECN 334
A AL+ +YS+ + +F E++H DIV+WN +I ++
Sbjct: 292 LTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-P 350
Query: 335 DWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGL 394
+ A+ L +++ P+ +T SS LKACA + +H+ +IK +D + L
Sbjct: 351 ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 395 IDMYSKCEMLSDARRVYELMPKKDII 420
I Y+KC L RV++ M +D++
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVV 436
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 172/388 (44%), Gaps = 23/388 (5%)
Query: 39 SQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKC- 97
S CF P +T LS + S G ++H ++ G N ++S+Y +C
Sbjct: 155 SHCF------PNEFT--LSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCH 206
Query: 98 -GRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPS 156
G Y V ++ + +V+W+++I+ + GK+A+ F M GV + T +
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266
Query: 157 VLKACSIKKDLNMGR------KVHGMSVVTGFDSDGFVANTLVVMYAKCGQ-LGDSRKLF 209
+ + DL ++H ++V +G + VA L+ +Y++ + D KLF
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLF 326
Query: 210 GSIV-APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNG 268
+ +V+WN + + + D A+ LF ++ + + P+ ++ S +L ACAGL
Sbjct: 327 MEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 269 SXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGC 328
D N+L+ Y+K G ++ + VF+++ D+VSWN+++
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 329 VQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG-RQLHSCLIKIDTDSD 387
H D L + +M + P+ T + L AC+ G + G R S K +T
Sbjct: 446 SLHGQVDSILPVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 388 FFVAVGLIDMYSKCEMLSDARRVYELMP 415
+IDM S+ E ++A V + MP
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMP 530
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 7/266 (2%)
Query: 69 MELHAHLIRFGFSHDPSFRNHLVSLYSK-CGRFGYARKLVDQSTETDVVVSWSALISGYV 127
++LH+ ++ G L+ +YS+ + KL + + +V+W+ +I+ +
Sbjct: 287 LQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA 346
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
+ A+ F + + + +TF SVLKAC+ +H + GF +D
Sbjct: 347 VYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV 405
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
+ N+L+ YAKCG L ++F + + VVSWN++ Y + +F++M
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---D 462
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA-LVDMYSKGGRIENA 306
I P+ + +L+AC+ Q + A ++DM S+ R A
Sbjct: 463 INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEA 522
Query: 307 VAVFEEIT-HPDIVSWNAVIAGCVQH 331
V +++ PD V W A++ C +H
Sbjct: 523 EEVIKQMPMDPDAVVWIALLGSCRKH 548
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 20/249 (8%)
Query: 24 TSRTIVDSQTNVVSNSQCFQSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSH 82
T+ + D + + Q Q P +++++L C + + +HA +I+ GF
Sbjct: 343 TAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLA 402
Query: 83 DPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDM 142
D N L+ Y+KCG ++ D D VVSW++++ Y +G L F M
Sbjct: 403 DTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRD-VVSWNSMLKAYSLHGQVDSILPVFQKM 461
Query: 143 CMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTG-FDSDGFVANT-----LVVMY 196
+ + TF ++L ACS + GR G+ + F+ + ++ M
Sbjct: 462 ---DINPDSATFIALLSACS-----HAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDML 513
Query: 197 AKCGQLGDSRKLFGSI-VAPSVVSWNALF-SC--YVQSDFCVEAVDLFKEMVRGGIRPNE 252
++ + ++ ++ + + P V W AL SC + + A D KE+V +
Sbjct: 514 SRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSY 573
Query: 253 FSLSIILNA 261
+S I NA
Sbjct: 574 IQMSNIYNA 582
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 151/304 (49%), Gaps = 1/304 (0%)
Query: 65 LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALIS 124
L LG ++H + ++ G D + + L +LYSKCG + KL Q W+++IS
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLF-QGIPFKDNACWASMIS 524
Query: 125 GYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
G+ + G+ +EA+ F++M G +E T +VL CS L G+++HG ++ G D
Sbjct: 525 GFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV 244
+ + LV MY+KCG L +R+++ + VS ++L S Y Q + LF++MV
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Query: 245 RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
G + F++S IL A A S + ++L+ MYSK G I+
Sbjct: 645 MSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSID 704
Query: 305 NAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACA 364
+ F +I PD+++W A+IA QH + AL + N MK G P+ T L AC+
Sbjct: 705 DCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS 764
Query: 365 AVGF 368
G
Sbjct: 765 HGGL 768
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 186/380 (48%), Gaps = 11/380 (2%)
Query: 45 FTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
F KP +Y+++L+ C + + L G + A +I+ G + D +V LY+KCG A
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEA 304
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
++ + VVSW+ ++SGY ++ AL F +M GV+ N T SV+ AC
Sbjct: 305 MEVFSR-IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF---GSIVAPSVVSW 220
+ +VH +GF D VA L+ MY+K G + S ++F I ++V
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-- 421
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXX 280
N + + + QS +A+ LF M++ G+R +EFS+ +L+ L G
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGL 481
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALAL 340
D ++L +YSK G +E + +F+ I D W ++I+G ++ A+ L
Sbjct: 482 VL---DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 341 LNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSK 400
+EM G P+ T+++ L C++ G+++H ++ D + L++MYSK
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 401 CEMLSDARRVYELMPKKDII 420
C L AR+VY+ +P+ D +
Sbjct: 599 CGSLKLARQVYDRLPELDPV 618
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 180/368 (48%), Gaps = 3/368 (0%)
Query: 53 TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
T+++S C + ++HA + + GF D S L+S+YSK G + ++ + +
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK 172
+ +I+ + Q+ +A+ F M G++ +EF+ S+L S+ LN+G++
Sbjct: 415 IQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQ 471
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDF 232
VHG ++ +G D V ++L +Y+KCG L +S KLF I W ++ S + + +
Sbjct: 472 VHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGY 531
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
EA+ LF EM+ G P+E +L+ +L C+ + +A
Sbjct: 532 LREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSA 591
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
LV+MYSK G ++ A V++ + D VS +++I+G QH L +M SG +
Sbjct: 592 LVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMD 651
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
F ISS LKA A LG Q+H+ + KI ++ V L+ MYSK + D + +
Sbjct: 652 SFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFS 711
Query: 413 LMPKKDII 420
+ D+I
Sbjct: 712 QINGPDLI 719
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 165/343 (48%), Gaps = 3/343 (0%)
Query: 71 LHAHLIR-FGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
L AHL+R + D L+S YS G A KL D + DVV S + +ISGY Q+
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVV-SCNIMISGYKQH 128
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
+E+L F+ M LG + NE ++ SV+ ACS + V ++ G+ V
Sbjct: 129 RLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIR 249
+ L+ +++K + D+ K+F ++ +V WN + + +++ DLF EM G +
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 250 PNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAV 309
P+ ++ S +L ACA L D F A+VD+Y+K G + A+ V
Sbjct: 249 PDSYTYSSVLAACASLEK-LRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 310 FEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK 369
F I +P +VSW +++G + AL + EM+ SG N T++S + AC
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 370 DLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
Q+H+ + K D VA LI MYSK + + +V+E
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFE 410
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 5/280 (1%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
+L+ C + SL G E+H + +R G + LV++YSKCG AR++ D+ E D
Sbjct: 557 VLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
V S S+LISGY Q+G ++ L F DM M G + F S+LKA ++ + ++G +VH
Sbjct: 617 PV-SCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVH 675
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV 234
G ++ V ++L+ MY+K G + D K F I P +++W AL + Y Q
Sbjct: 676 AYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKAN 735
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
EA+ ++ M G +P++ + +L+AC+ GL S ++
Sbjct: 736 EALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV-C 794
Query: 293 LVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQH 331
+VD + GR+ A + + PD + W ++A C H
Sbjct: 795 MVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIH 834
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 1/236 (0%)
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV 244
D F+ +L+ Y+ G + D+ KLF +I P VVS N + S Y Q E++ F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 245 RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
G NE S +++AC+ L+ + +AL+D++SK R E
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 305 NAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACA 364
+A VF + ++ WN +IAG ++++ L +EM P+ +T SS L ACA
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 365 AVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
++ G+ + + +IK + D FV ++D+Y+KC +++A V+ +P ++
Sbjct: 263 SLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVV 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
FT + +++L S +LG ++HA++ + G +PS + L+++YSK G
Sbjct: 648 FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCC 707
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
K Q D +++W+ALI+ Y Q+G EAL +N M G K ++ TF VL ACS
Sbjct: 708 KAFSQINGPD-LIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS-H 765
Query: 165 KDLNMGRKVHGMSVVT--GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWN 221
L H S+V G + + +V + G+L ++ ++ + P + W
Sbjct: 766 GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWG 825
Query: 222 ALFS 225
L +
Sbjct: 826 TLLA 829
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 166/350 (47%), Gaps = 34/350 (9%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
+H+ +I + S L+ Y+ ARK+ D+ E +V++ + +I YV NG
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII-INVMIRSYVNNG 119
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVAN 190
F E + F MC V+ + +TFP VLKACS + +GRK+HG + G S FV N
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 191 TLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
LV MY KCG L ++R + + VVSWN+L Y Q+ +A+++ +EM I
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
+ +++ +L A + + + DM+ K G+
Sbjct: 240 DAGTMASLLPAVSNTTTENVMY--------------------VKDMFFKMGK-------- 271
Query: 311 EEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD 370
+VSWN +I +++ A+ L + M++ G P+ +I+S L AC
Sbjct: 272 -----KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326
Query: 371 LGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
LG+++H + + + + LIDMY+KC L AR V+E M +D++
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 6/227 (2%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
+VSW+ +I Y++N EA+ ++ M G + + + SVL AC L++G+K+HG
Sbjct: 274 LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHG 333
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVE 235
+ + N L+ MYAKCG L +R +F ++ + VVSW A+ S Y S +
Sbjct: 334 YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393
Query: 236 AVDLFKEMVRGGIRPNEFSLSIILNAC--AG-LRNGSXXXXXXXXXXXXXXXXDQFSANA 292
AV LF ++ G+ P+ + L AC AG L G + +
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA--C 451
Query: 293 LVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWAL 338
+VD+ + G+++ A ++++ P+ W A++ C H D L
Sbjct: 452 MVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%)
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
D+ R VH ++ + + L+ YA + +RK+F I +V+ N +
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX 285
YV + F E V +F M +RP+ ++ +L AC+
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
F N LV MY K G + A V +E++ D+VSWN+++ G Q++ D AL + EM+
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 346 SSGACPNVFTISSALKACA 364
S + T++S L A +
Sbjct: 234 SVKISHDAGTMASLLPAVS 252
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F +S T++L C + +L+LG ++H ++ R + N L+ +Y+KCG AR
Sbjct: 305 FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKAR 364
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
+ + D VVSW+A+IS Y +G G +A+ F+ + G+ + F + L ACS
Sbjct: 365 DVFENMKSRD-VVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSW 220
L GR ++T L M G+ G ++ + I + P+ W
Sbjct: 424 GLLEEGRSC--FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVW 481
Query: 221 NALF-SCYVQSD 231
AL +C V SD
Sbjct: 482 GALLGACRVHSD 493
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 177/355 (49%), Gaps = 13/355 (3%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
+LHA +IR D L+S S C + A ++ +Q E +V + ++LI + QN
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC-NSLIRAHAQN 95
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
+A F++M G+ + FT+P +LKACS + L + + +H G SD +V
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 190 NTLVVMYAKCGQLG--DSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
N L+ Y++CG LG D+ KLF + VSWN++ V++ +A LF EM +
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
+ S + +L+ A R S + S + +V YSK G +E A
Sbjct: 216 L----ISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMAR 267
Query: 308 AVFEEITHP--DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
+F+++ P ++V+W +IAG + A L+++M +SG + + S L AC
Sbjct: 268 VMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTE 327
Query: 366 VGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
G LG ++HS L + + S+ +V L+DMY+KC L A V+ +PKKD++
Sbjct: 328 SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV 382
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 171/389 (43%), Gaps = 21/389 (5%)
Query: 35 VVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY 94
V S Q F F +Y LL C L + +H H+ + G S D N L+ Y
Sbjct: 104 VFSEMQRFGLFADN-FTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCY 162
Query: 95 SKCGRFGY--ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEF 152
S+CG G A KL ++ +E D V SW++++ G V+ G ++A F++M +
Sbjct: 163 SRCGGLGVRDAMKLFEKMSERDTV-SWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNT 221
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
+ + K + K+ + V+ +T+V+ Y+K G + +R +F +
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSW--------STMVMGYSKAGDMEMARVMFDKM 273
Query: 213 VAPS--VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSX 270
P+ VV+W + + Y + EA L +MV G++ + ++ IL AC S
Sbjct: 274 PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSL 333
Query: 271 XXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQ 330
+ + NAL+DMY+K G ++ A VF +I D+VSWN ++ G
Sbjct: 334 GMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGV 393
Query: 331 HECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFV 390
H A+ L + M+ G P+ T + L +C G D G + K+ D
Sbjct: 394 HGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV---YDLVP 450
Query: 391 AVG----LIDMYSKCEMLSDARRVYELMP 415
V L+D+ + L +A +V + MP
Sbjct: 451 QVEHYGCLVDLLGRVGRLKEAIKVVQTMP 479
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 8/281 (2%)
Query: 90 LVSLYSKCGRFGYARKLVDQ-STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVK 148
+V YSK G AR + D+ VV+W+ +I+GY + G KEA + M G+K
Sbjct: 253 MVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312
Query: 149 CNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKL 208
+ S+L AC+ L++G ++H + + S+ +V N L+ MYAKCG L + +
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 372
Query: 209 FGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL- 265
F I +VSWN + EA++LF M R GIRP++ + +L +C AGL
Sbjct: 373 FNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLI 432
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAV 324
G + + LVD+ + GR++ A+ V + + P++V W A+
Sbjct: 433 DEGIDYFYSMEKVYDLVPQVEHYG--CLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGAL 490
Query: 325 IAGCVQHECNDWALALLNEMKSSGAC-PNVFTISSALKACA 364
+ C H D A +L+ + C P +++ S + A A
Sbjct: 491 LGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAA 531
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 43/258 (16%)
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
+LN +++H + D +A L+ + C Q + ++F + P+V N+L
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX 285
+ Q+ +A +F EM R G+ + F+ +L AC+G
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 286 DQFSANALVDMYSKGG--RIENAVAVFEEITHPDIVSWNAVIAGCVQH-ECNDWALALLN 342
D + NAL+D YS+ G + +A+ +FE+++ D VSWN+++ G V+ E D A L +
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD-ARRLFD 209
Query: 343 EMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCE 402
EM LI +T ++D Y++C
Sbjct: 210 EMPQRD------------------------------LISWNT---------MLDGYARCR 230
Query: 403 MLSDARRVYELMPKKDII 420
+S A ++E MP+++ +
Sbjct: 231 EMSKAFELFEKMPERNTV 248
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 186/399 (46%), Gaps = 35/399 (8%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV 115
L C ++ G + AH+I+ G S + N+++S+Y A K+ D+ +E ++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC-NEFTFPSVLKACSIKKDLNMGRKVH 174
V +W+ ++SGY +G +A+ + M + NEF + +VLKAC + D+ +G V+
Sbjct: 72 V-TWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV 234
D + N++V MY K G+L ++ F I+ PS SWN L S Y ++
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 235 EAVDLFKEMV------------------------------RGGIRPNEFSLSIILNACAG 264
EAV LF M R G+ + F+L L AC+
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 265 LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE---ITHPDIVSW 321
+ F+ +AL+DMYS G + A VF + + + W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 322 NAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
N++++G + +E N+ AL LL ++ S C + +T+S ALK C LG Q+HS ++
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVV 370
Query: 382 IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ D+ V L+D+++ + DA +++ +P KDII
Sbjct: 371 SGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDII 409
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 156/325 (48%), Gaps = 12/325 (3%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS--TET 113
L C LT+G +LH +++ G P + L+ +YS CG YA + Q
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 114 DVVVSWSALISGYVQNGFGKEALLAF-----NDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
V W++++SG++ N + AL +D+C + +T LK C +L
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCF-----DSYTLSGALKICINYVNLR 359
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
+G +VH + VV+G++ D V + LV ++A G + D+ KLF + +++++ L V
Sbjct: 360 LGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV 419
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
+S F A LF+E+++ G+ ++F +S IL C+ L + +
Sbjct: 420 KSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV 479
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
+A ALVDMY K G I+N V +F+ + D+VSW +I G Q+ + A ++M + G
Sbjct: 480 TATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG 539
Query: 349 ACPNVFTISSALKACAAVGFKDLGR 373
PN T L AC G + R
Sbjct: 540 IEPNKVTFLGLLSACRHSGLLEEAR 564
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 164/336 (48%), Gaps = 5/336 (1%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N L+S Y K G A L + + +VV SW+ LISG+V G AL M G+
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVV-SWNCLISGFVDKG-SPRALEFLVRMQREGL 234
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+ F P LKACS L MG+++H V +G +S F + L+ MY+ CG L +
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAAD 294
Query: 208 LFGS---IVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG 264
+F V SV WN++ S ++ ++ A+ L ++ + + + ++LS L C
Sbjct: 295 VFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICIN 354
Query: 265 LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAV 324
N D + LVD+++ G I++A +F + + DI++++ +
Sbjct: 355 YVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGL 414
Query: 325 IAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDT 384
I GCV+ N A L E+ G + F +S+ LK C+++ G+Q+H IK
Sbjct: 415 IRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGY 474
Query: 385 DSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+S+ A L+DMY KC + + +++ M ++D++
Sbjct: 475 ESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVV 510
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 159/336 (47%), Gaps = 17/336 (5%)
Query: 41 CFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF 100
CF S+T + L C+ +L LG+++H+ ++ G+ D + LV L++ G
Sbjct: 339 CFDSYT-----LSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNI 393
Query: 101 GYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA 160
A KL + D++ ++S LI G V++GF A F ++ LG+ ++F ++LK
Sbjct: 394 QDAHKLFHRLPNKDII-AFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKV 452
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
CS L G+++HG+ + G++S+ A LV MY KCG++ + LF ++ VVSW
Sbjct: 453 CSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSW 512
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC---AGLRNGSXXXXXXXX 277
+ + Q+ EA F +M+ GI PN+ + +L+AC L
Sbjct: 513 TGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKS 572
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDW 336
+ + +VD+ + G + A + ++ PD W +++ C H+ N
Sbjct: 573 EYGLEPYLEHYY--CVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHK-NAG 629
Query: 337 ALALLNE--MKSSGACPNVFTISSALKACAAVGFKD 370
+ ++ E +K P+V+T S A A +G D
Sbjct: 630 LVTVIAEKLLKGFPDDPSVYT--SLSNAYATLGMWD 663
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 172/335 (51%), Gaps = 5/335 (1%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N +VS + K G AR L D+ + DVV +W+A+I+GY + + A F++M G
Sbjct: 50 NLIVSYFEK-GLVEEARSLFDEMPDRDVV-AWTAMITGYASSNYNARAWECFHEMVKQGT 107
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
NEFT SVLK+C K L G VHG+ V G + +V N ++ MYA C ++
Sbjct: 108 SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAAC 167
Query: 208 L-FGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR 266
L F I + V+W L + + + + ++K+M+ + ++I + A A +
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID 227
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
+ + + N+++D+Y + G + A F E+ D+++WN +I+
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDS 386
+ + ++ AL + +S G PN +T +S + ACA + + G+QLH + + +
Sbjct: 288 ELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 387 DFFVAVGLIDMYSKCEMLSDARRVY-ELMPKKDII 420
+ +A LIDMY+KC + D++RV+ E++ +++++
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLV 381
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 144/276 (52%), Gaps = 9/276 (3%)
Query: 64 SLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALI 123
S+T G ++HA +I+ GF + N ++ LY +CG A+ + + D++ +W+ LI
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI-TWNTLI 286
Query: 124 SGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD 183
S ++ EALL F G N +TF S++ AC+ LN G+++HG GF+
Sbjct: 287 SE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIV-APSVVSWNALFSCYVQSDFCVEAVDLFKE 242
+ +AN L+ MYAKCG + DS+++FG IV ++VSW ++ Y + EAV+LF +
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 243 MVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
MV GIRP+ +L+AC AGL G D + N +VD+ +
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIY--NCVVDLLGR 463
Query: 300 GGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECN 334
G+I A + E + PD +W A++ C H+ N
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHN 499
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 178/387 (45%), Gaps = 12/387 (3%)
Query: 40 QCFQSFTKP---PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY 94
+CF K P +T ++L C K L G +H +++ G N ++++Y
Sbjct: 97 ECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMY 156
Query: 95 SKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTF 154
+ C A L+ + + V+W+ LI+G+ G G L + M + + +
Sbjct: 157 ATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCI 216
Query: 155 PSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA 214
++A + + G+++H + GF S+ V N+++ +Y +CG L +++ F +
Sbjct: 217 TIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMED 276
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
+++WN L S +SD EA+ +F+ G PN ++ + ++ ACA + +
Sbjct: 277 KDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQL 335
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHEC 333
+ ANAL+DMY+K G I ++ VF EI ++VSW +++ G H
Sbjct: 336 HGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGY 395
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFV 390
A+ L ++M SSG P+ + L AC G + G + + + I+ D D +
Sbjct: 396 GAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYN 455
Query: 391 AVGLIDMYSKCEMLSDARRVYELMPKK 417
V +D+ + + +A + E MP K
Sbjct: 456 CV--VDLLGRAGKIGEAYELVERMPFK 480
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 1/235 (0%)
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
+A L+V Y + G + ++R LF + VV+W A+ + Y S++ A + F EMV+
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK-GGRIEN 305
G PNEF+LS +L +C ++ + + NA+++MY+ +E
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
A +F +I + V+W +I G L + +M A + I+ A++A A+
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 366 VGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ G+Q+H+ +IK S+ V ++D+Y +C LS+A+ + M KD+I
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 94/184 (51%), Gaps = 2/184 (1%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
Q F ++T+L++ C +L G +LH + R GF+ + N L+ +Y+KCG
Sbjct: 307 QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPD 366
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
++++ + + +VSW++++ GY +G+G EA+ F+ M G++ + F +VL AC
Sbjct: 367 SQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACR 426
Query: 163 IKKDLNMGRKVHG-MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSW 220
+ G K M G + D + N +V + + G++G++ +L + P +W
Sbjct: 427 HAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTW 486
Query: 221 NALF 224
A+
Sbjct: 487 GAIL 490
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 170/370 (45%), Gaps = 43/370 (11%)
Query: 52 YTNLLSQCVASKSLTL-GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
Y L +C + L G +H ++R G D N L+ LY +CG YARK+ D+
Sbjct: 8 YLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEM 67
Query: 111 TETDV------------------------------VVSWSALISGYVQNGFGKEALLAFN 140
+ DV VVSW+ +IS V+ GF ++AL+ +
Sbjct: 68 SVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYK 127
Query: 141 DMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCG 200
M G + FT SVL ACS D G + HG++V TG D + FV N L+ MYAKCG
Sbjct: 128 RMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 187
Query: 201 QLGD-SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
+ D ++F S+ P+ VS+ A+ + + +EAV +F+ M G++ + LS IL
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXX----------DQFSANALVDMYSKGGRIENAVAV 309
+ A R G D N+L+++Y+K + A +
Sbjct: 248 SISAP-REGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELI 306
Query: 310 FEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK 369
F E+ ++VSWN +I G Q +D ++ L M+ SG PN T S L AC G
Sbjct: 307 FAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDV 366
Query: 370 DLGRQLHSCL 379
+ GR++ S +
Sbjct: 367 ETGRRIFSSI 376
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 162/356 (45%), Gaps = 38/356 (10%)
Query: 67 LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
LG ++H +R GF D N L+ +Y+K A + + E +VV SW+ +I G+
Sbjct: 267 LGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVV-SWNIMIVGF 325
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
Q +++ M G + NE T SVL AC D+ GR++
Sbjct: 326 GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI------------- 372
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
F SI PSV +WNA+ S Y + EA+ F++M
Sbjct: 373 ----------------------FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 410
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
++P++ +LS+IL++CA LR + + L+ +YS+ ++E +
Sbjct: 411 NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEIS 470
Query: 307 VAVFEE-ITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA-CPNVFTISSALKACA 364
+F++ I DI WN++I+G + + AL L M + CPN + ++ L +C+
Sbjct: 471 ECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCS 530
Query: 365 AVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ GRQ H ++K SD FV L DMY KC + AR+ ++ + +K+ +
Sbjct: 531 RLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV 586
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 142/295 (48%), Gaps = 7/295 (2%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
FQ+ + + +LS C + L G ++H +IR S + + L+++YS+C +
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC-NEFTFPSVLKA 160
+ + D + W+++ISG+ N +AL+ F M V C NE +F +VL +
Sbjct: 469 ISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSS 528
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
CS L GR+ HG+ V +G+ SD FV L MY KCG++ +R+ F +++ + V W
Sbjct: 529 CSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIW 588
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXX 277
N + Y + EAV L+++M+ G +P+ + +L AC +GL G
Sbjct: 589 NEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQR 648
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP-DIVSWNAVIAGCVQH 331
D + +VD + GR+E+A + E + V W +++ C H
Sbjct: 649 IHGIEPELDHYI--CIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVH 701
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 172/401 (42%), Gaps = 44/401 (10%)
Query: 21 IHTTSRTIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGF 80
I R + + VV F + ++LS C GM H ++ G
Sbjct: 110 ISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGL 169
Query: 81 SHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFN 140
+ N L+S+Y+KCG V +S VS++A+I G + EA+ F
Sbjct: 170 DKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFR 229
Query: 141 DMCMLGVKCNEFTFPSVLKACSIKKDLN---------MGRKVHGMSVVTGFDSDGFVANT 191
MC GV+ + ++L + ++ + +G+++H +++ GF D + N+
Sbjct: 230 LMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNS 289
Query: 192 LVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPN 251
L+ +YAK + + +F + +VVSWN + + Q ++V+ M G +PN
Sbjct: 290 LLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPN 349
Query: 252 EFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE 311
E + +L AC + G +E +F
Sbjct: 350 EVTCISVLGACF-----------------------------------RSGDVETGRRIFS 374
Query: 312 EITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDL 371
I P + +WNA+++G +E + A++ +M+ P+ T+S L +CA + F +
Sbjct: 375 SIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEG 434
Query: 372 GRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
G+Q+H +I+ + + + GLI +YS+CE + + +++
Sbjct: 435 GKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFD 475
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 150/307 (48%), Gaps = 7/307 (2%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
V +W+A++SGY +EA+ F M +K ++ T +L +C+ + L G+++HG
Sbjct: 381 VSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHG 440
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP-SVVSWNALFSCYVQSDFCV 234
+ + T + + + L+ +Y++C ++ S +F + + WN++ S + +
Sbjct: 441 VVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDT 500
Query: 235 EAVDLFKEMVRGGIR-PNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
+A+ LF+ M + + PNE S + +L++C+ L + D F AL
Sbjct: 501 KALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETAL 560
Query: 294 VDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNV 353
DMY K G I++A F+ + + V WN +I G + D A+ L +M SSG P+
Sbjct: 561 TDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDG 620
Query: 354 FTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
T S L AC+ G + G ++ S + + I+ + D ++ + +D + L DA ++
Sbjct: 621 ITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICI--VDCLGRAGRLEDAEKL 678
Query: 411 YELMPKK 417
E P K
Sbjct: 679 AEATPYK 685
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 136/292 (46%), Gaps = 41/292 (14%)
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ---------------------------- 201
G+ +HG V G SD ++ N L+ +Y +CG
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 202 ---LGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSII 258
LG++ ++F + VVSWN + S V+ F +A+ ++K MV G P+ F+L+ +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 259 LNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI-ENAVAVFEEITHPD 317
L+AC+ + +G + F NAL+ MY+K G I + V VFE ++ P+
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 318 IVSWNAVIAGCVQHECNDWALALLNEMKSSGA------CPNVFTISSALKAC---AAVGF 368
VS+ AVI G + A+ + M G N+ +IS+ + C + +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 369 KDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+LG+Q+H +++ D + L+++Y+K + ++ A ++ MP+ +++
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVV 316
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 155/319 (48%), Gaps = 38/319 (11%)
Query: 135 ALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVV 194
A+ + + L K + FTFP VLK D+ GR++HG VV GFDS V L+
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 195 MYAKCGQLGDSRKLFGSIVAPSVVSWNALFS-------------------CYVQSDF--- 232
MY CG LGD+RK+F ++ V WNAL + C+V+++
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 233 CV-----------EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
CV EA+++F+ M+ + P+E +L +L+ACA L GS
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADL--GSLELGERICSYVD 277
Query: 282 XXXXDQFSA--NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALA 339
++ + NA++DMY+K G I A+ VFE + ++V+W +IAG H ALA
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALA 337
Query: 340 LLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQL-HSCLIKIDTDSDFFVAVGLIDMY 398
+ N M +G PN T + L AC+ VG+ DLG++L +S K + +ID+
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLL 397
Query: 399 SKCEMLSDARRVYELMPKK 417
+ L +A V + MP K
Sbjct: 398 GRAGKLREADEVIKSMPFK 416
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 33/251 (13%)
Query: 46 TKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
KP ++ +L V + G ++H ++ FGF L+ +Y CG G AR
Sbjct: 112 AKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDAR 171
Query: 105 KLVDQSTETDV--------------------------------VVSWSALISGYVQNGFG 132
K+ D+ DV VSW+ +ISGY ++G
Sbjct: 172 KMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRA 231
Query: 133 KEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTL 192
EA+ F M M V+ +E T +VL AC+ L +G ++ G + + N +
Sbjct: 232 SEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAV 291
Query: 193 VVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNE 252
+ MYAK G + + +F + +VV+W + + EA+ +F MV+ G+RPN+
Sbjct: 292 IDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPND 351
Query: 253 FSLSIILNACA 263
+ IL+AC+
Sbjct: 352 VTFIAILSACS 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 92/187 (49%), Gaps = 3/187 (1%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
++ ++ +LS C SL LG + +++ G + S N ++ +Y+K G
Sbjct: 243 MENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
A + + E +VV +W+ +I+G +G G EAL FN M GV+ N+ TF ++L AC
Sbjct: 303 KALDVFECVNERNVV-TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSAC 361
Query: 162 SIKKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVS 219
S +++G+++ + M G + ++ + + G+L ++ ++ S+ +
Sbjct: 362 SHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAI 421
Query: 220 WNALFSC 226
W +L +
Sbjct: 422 WGSLLAA 428
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI-AGCVQHECNDWALALLNEM 344
D + ++ S G + A +VF P+ N +I A + E N ++A+
Sbjct: 46 DNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYR 105
Query: 345 KSSGAC--PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCE 402
K C P+ FT LK V GRQ+H ++ DS V GLI MY C
Sbjct: 106 KLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCG 165
Query: 403 MLSDARRVYELMPKKDI 419
L DAR++++ M KD+
Sbjct: 166 GLGDARKMFDEMLVKDV 182
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 191/379 (50%), Gaps = 15/379 (3%)
Query: 44 SFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
S +++ +++ C + +G ++H I+ G+ N +++YS FG A
Sbjct: 286 SLRPTDLTFVSVMGSCSCA---AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAA 342
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
K+ + E D+V +W+ +IS Y Q GK A+ + M ++GVK +EFTF S+L A S+
Sbjct: 343 HKVFESLEEKDLV-TWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL-ATSL 400
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNAL 223
DL++ V + G S ++N L+ Y+K GQ+ + LF + +++SWNA+
Sbjct: 401 --DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAI 458
Query: 224 FSCYVQSDFCVEAVDLFKEMVRGGIR--PNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
S + + F E ++ F ++ +R P+ ++LS +L+ C +
Sbjct: 459 ISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRH 518
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALL 341
+ NAL++MYS+ G I+N++ VF +++ D+VSWN++I+ +H + A+
Sbjct: 519 GQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTY 578
Query: 342 NEMKSSG-ACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDM 397
M+ G P+ T S+ L AC+ G + G ++ + +++ + + D F L+D+
Sbjct: 579 KTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSC--LVDL 636
Query: 398 YSKCEMLSDARRVYELMPK 416
+ L +A + ++ K
Sbjct: 637 LGRAGHLDEAESLVKISEK 655
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 188/382 (49%), Gaps = 31/382 (8%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS- 110
+ +LS C SL G ++H+ +I+ GF S N L+++Y C + +VD
Sbjct: 193 FATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNC------QVVVDACL 245
Query: 111 --TETDVVV----SWSALISGYVQNGFGK-EALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
ETDV V +++ +I G GF + E+LL F M ++ + TF SV+ +CS
Sbjct: 246 VFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSC 303
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNAL 223
MG +VHG+++ TG++ V+N + MY+ G + K+F S+ +V+WN +
Sbjct: 304 AA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTM 360
Query: 224 FSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXX 283
S Y Q+ A+ ++K M G++P+EF+ +L L
Sbjct: 361 ISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL---DVLEMVQACIIKFGL 417
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH-----ECNDWAL 338
+NAL+ YSK G+IE A +FE +++SWNA+I+G + ++
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSC 477
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMY 398
L +E++ P+ +T+S+ L C + LG Q H+ +++ + + LI+MY
Sbjct: 478 LLESEVR---ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMY 534
Query: 399 SKCEMLSDARRVYELMPKKDII 420
S+C + ++ V+ M +KD++
Sbjct: 535 SQCGTIQNSLEVFNQMSEKDVV 556
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 156/335 (46%), Gaps = 14/335 (4%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
L+S K G YA ++ D+ E D V W+A+I+G ++G+ + ++ F +M LGV+
Sbjct: 129 LLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRH 188
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
++F F ++L C L+ G++VH + + GF V N L+ MY C + D+ +F
Sbjct: 189 DKFGFATILSMCDYGS-LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVF 247
Query: 210 GS--IVAPSVVSWNALFSCYV--QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL 265
+ V++N + + D E++ +F++M+ +RP + + ++ +C+
Sbjct: 248 EETDVAVRDQVTFNVVIDGLAGFKRD---ESLLVFRKMLEASLRPTDLTFVSVMGSCSCA 304
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
G +NA + MYS A VFE + D+V+WN +I
Sbjct: 305 AMGHQVHGLAIKTGYEKYT---LVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMI 361
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTD 385
+ Q + A+++ M G P+ FT S L + D+ + +C+IK
Sbjct: 362 SSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL---DVLEMVQACIIKFGLS 418
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
S ++ LI YSK + A ++E +K++I
Sbjct: 419 SKIEISNALISAYSKNGQIEKADLLFERSLRKNLI 453
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 16/272 (5%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
+ A +I+FG S N L+S YSK G+ A L ++S +++ SW+A+ISG+ NG
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLI-SWNAIISGFYHNG 466
Query: 131 FGKEALLAFNDMCMLGVKC----NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
F E L F+ C+L + + +T ++L C L +G + H + G +
Sbjct: 467 FPFEGLERFS--CLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKET 524
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV-R 245
+ N L+ MY++CG + +S ++F + VVSWN+L S Y + AV+ +K M
Sbjct: 525 LIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDE 584
Query: 246 GGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
G + P+ + S +L+AC AGL G D FS LVD+ + G
Sbjct: 585 GKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFS--CLVDLLGRAGH 642
Query: 303 IENA---VAVFEEITHPDIVSWNAVIAGCVQH 331
++ A V + E+ + W A+ + C H
Sbjct: 643 LDEAESLVKISEKTIGSRVDVWWALFSACAAH 674
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 17/196 (8%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P +YT LLS CV++ SL LG + HA+++R G + N L+++YS+CG + ++
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKACSIKK 165
+Q +E D VVSW++LIS Y ++G G+ A+ + M G V + TF +VL ACS
Sbjct: 547 FNQMSEKD-VVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANT-----LVVMYAKCGQLGDSR---KLFGSIVAPSV 217
+ G ++ V + G + N LV + + G L ++ K+ + V
Sbjct: 606 LVEEGLEIFNSMV----EFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRV 661
Query: 218 VSWNALFS-CYVQSDF 232
W ALFS C D
Sbjct: 662 DVWWALFSACAAHGDL 677
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 174/351 (49%), Gaps = 14/351 (3%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
LH ++ GF+ D NHLV Y K ARKL D+ E +VV SW+++ISGY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVV-SWTSVISGYNDMG 109
Query: 131 FGKEALLAFNDMCM-LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
+ AL F M V NE+TF SV KACS + +G+ +H ++G + V+
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVS 169
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVA--PSVVSWNALFSCYVQSDFCVEAVDLFKEM--VR 245
++LV MY KC + +R++F S++ +VVSW ++ + Y Q+ EA++LF+
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 246 GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
R N+F L+ +++AC+ L + A +L+DMY+K G +
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
A +F I ++S+ ++I +H + A+ L +EM + PN T+ L AC+
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 366 VGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDARRVYEL 413
G + G + S + + + DS + V +DM + + +A YEL
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCV--VDMLGRFGRVDEA---YEL 395
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 136/294 (46%), Gaps = 11/294 (3%)
Query: 48 PPISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
PP YT ++ C A +G +HA L G + + LV +Y KC AR+
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARR 187
Query: 106 LVDQSTETDV-VVSWSALISGYVQNGFGKEALLAFN--DMCMLGVKCNEFTFPSVLKACS 162
+ D VVSW+++I+ Y QN G EA+ F + + + N+F SV+ ACS
Sbjct: 188 VFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACS 247
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
L G+ HG+ G++S+ VA +L+ MYAKCG L + K+F I SV+S+ +
Sbjct: 248 SLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTS 307
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXXXXXXX 280
+ + AV LF EMV G I PN +L +L+AC +GL N
Sbjct: 308 MIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVN-EGLEYLSLMAEK 366
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEI---THPDIVSWNAVIAGCVQH 331
D +VDM + GR++ A + + I + W A+++ H
Sbjct: 367 YGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLH 420
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
D F+ N LV Y K I A +F+E+ P++VSW +VI+G AL++ +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 346 SSGACP-NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
P N +T +S KAC+A+ +G+ +H+ L + V+ L+DMY KC +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 405 SDARRVYELM 414
ARRV++ M
Sbjct: 183 ETARRVFDSM 192
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 164/331 (49%), Gaps = 14/331 (4%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N +++ Y++ G+ AR+L D+S DV +W+A++SGY+QN +EA F+ M
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQDVF-TWTAMVSGYIQNRMVEEARELFDKM----P 308
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+ NE ++ ++L + + M +++ + + NT++ YA+CG++ +++
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST----WNTMITGYAQCGKISEAKN 364
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRN 267
LF + VSW A+ + Y QS EA+ LF +M R G R N S S L+ CA +
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 268 GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAG 327
F NAL+ MY K G IE A +F+E+ DIVSWN +IAG
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 484
Query: 328 CVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDT 384
+H + AL MK G P+ T+ + L AC+ G D GRQ + + +
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544
Query: 385 DSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+S + ++D+ + +L DA + + MP
Sbjct: 545 NSQHYAC--MVDLLGRAGLLEDAHNLMKNMP 573
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 145/294 (49%), Gaps = 13/294 (4%)
Query: 45 FTKPP----ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF 100
F K P +S+ +L+ V + ME+ L + S N +++ Y++CG+
Sbjct: 304 FDKMPERNEVSWNAMLAGYVQGER----MEMAKELFDVMPCRNVSTWNTMITGYAQCGKI 359
Query: 101 GYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA 160
A+ L D+ + D V SW+A+I+GY Q+G EAL F M G + N +F S L
Sbjct: 360 SEAKNLFDKMPKRDPV-SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
C+ L +G+++HG V G+++ FV N L++MY KCG + ++ LF + +VSW
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 478
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GLRNGSXXXXXXXXX 278
N + + Y + F A+ F+ M R G++P++ ++ +L+AC+ GL +
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH 331
Q A +VD+ + G +E+A + + + PD W ++ H
Sbjct: 539 DYGVMPNSQHYA-CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 208/489 (42%), Gaps = 87/489 (17%)
Query: 6 LRFSYINSLSFKPQTIHTTSRTIVDSQTNVVSNSQCFQSF-----TKPPISYTNLLSQCV 60
+ + +LS + Q +H TS + + N + F S T+ S T L +C
Sbjct: 1 MEINKFRALSRRAQQLHYTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCG 60
Query: 61 ASKSLTLGMELHAHLIRFG--------FSHDPSFR----NHLVSLYSKCGRFGYARKLVD 108
S + + +++ R G F P + N ++S Y + G F ARKL D
Sbjct: 61 DSDIKEWNVAISSYM-RTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFD 119
Query: 109 QSTETDVV------------------------------VSWSALISGYVQNGFGKEALLA 138
+ E D+V SW+ ++SGY QNG +A
Sbjct: 120 EMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 139 FNDMCMLGVKCNEFTFPSVL----------KACSIKKDLN----------MGRKVHGMSV 178
F+ M + N+ ++ ++L +AC + K +G V +
Sbjct: 180 FDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI 235
Query: 179 VTG---FDS----DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
V FDS D NT++ YA+ G++ ++R+LF V +W A+ S Y+Q+
Sbjct: 236 VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR 295
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
EA +LF +M NE S + +L AG G + + N
Sbjct: 296 MVEEARELFDKMPE----RNEVSWNAML---AGYVQGERMEMAKELFDVMPCR-NVSTWN 347
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
++ Y++ G+I A +F+++ D VSW A+IAG Q + AL L +M+ G
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
N + SSAL CA V +LG+QLH L+K ++ FV L+ MY KC + +A ++
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 412 ELMPKKDII 420
+ M KDI+
Sbjct: 468 KEMAGKDIV 476
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 164/331 (49%), Gaps = 5/331 (1%)
Query: 93 LYSKCGRFG---YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
L + CGR G YARK+ D+ + V V ++++I Y + E L ++ M ++
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSV-YNSMIVVYSRGKNPDEVLRLYDQMIAEKIQP 114
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
+ TF +KAC L G V +V G+ +D FV ++++ +Y KCG++ ++ LF
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGS 269
G + V+ W + + + Q+ ++AV+ ++EM G + + +L A L +
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTK 234
Query: 270 XXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCV 329
+ +LVDMY+K G IE A VF + VSW ++I+G
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 330 QHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFF 389
Q+ + A + EM+S G P++ T+ L AC+ VG GR +H C I D
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVH-CYILKRHVLDRV 353
Query: 390 VAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
A L+DMYSKC LS +R ++E + +KD++
Sbjct: 354 TATALMDMYSKCGALSSSREIFEHVGRKDLV 384
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 172/363 (47%), Gaps = 13/363 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++T + C++ L G + + FG+ +D + +++LY KCG+ A L +
Sbjct: 118 TFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKM 177
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ DV+ W+ +++G+ Q G +A+ + +M G + +L+A D MG
Sbjct: 178 AKRDVI-CWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMG 236
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
R VHG TG + V +LV MYAK G + + ++F ++ + VSW +L S + Q+
Sbjct: 237 RSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQN 296
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA---GLRNGSXXXXXXXXXXXXXXXXDQ 287
+A + EM G +P+ +L +L AC+ L+ G D+
Sbjct: 297 GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGR----LVHCYILKRHVLDR 352
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
+A AL+DMYSK G + ++ +FE + D+V WN +I+ H ++L +M S
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLI---KIDTDSDFFVAVGLIDMYSKCEML 404
P+ T +S L A + G + G+ S +I KI +V LID+ ++ +
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVC--LIDLLARAGRV 470
Query: 405 SDA 407
+A
Sbjct: 471 EEA 473
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 6/269 (2%)
Query: 67 LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
+G +H +L R G + LV +Y+K G A ++ + VSW +LISG+
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM-FKTAVSWGSLISGF 293
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
QNG +A A +M LG + + T VL ACS L GR VH ++ D
Sbjct: 294 AQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVH-CYILKRHVLDR 352
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
A L+ MY+KCG L SR++F + +V WN + SCY E V LF +M
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 247 GIRPNEFSLSIILNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
I P+ + + +L+A + GL ++ L+D+ ++ GR+E
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYV-CLIDLLARAGRVE 471
Query: 305 NAVAVFE-EITHPDIVSWNAVIAGCVQHE 332
A+ + E + W A+++GC+ H
Sbjct: 472 EALDMINSEKLDNALPIWVALLSGCINHR 500
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 189/371 (50%), Gaps = 5/371 (1%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S++ LL + K LG ++H +I+ G+ + + LV +Y+KC R A + +
Sbjct: 103 SFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEI 162
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCM-LGVKCNEFTFPSVLKACSIKKDLNM 169
+E + V SW+ALI+G+VQ K A M M V + TF +L N+
Sbjct: 163 SEPNSV-SWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNL 221
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV-APSVVSWNALFSCYV 228
++VH + G + + N ++ YA CG + D++++F + + ++SWN++ + +
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
+ + A +LF +M R + + ++ + +L+AC+G +
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 289 SANALVDMYSK--GGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
+ NAL+ MY + G +E+A+++FE + D++SWN++I G Q ++ A+ + ++S
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSD 406
S + + S+ L++C+ + LG+Q+H+ K S+ FV LI MYSKC ++
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 407 ARRVYELMPKK 417
AR+ ++ + K
Sbjct: 462 ARKCFQQISSK 472
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 177/352 (50%), Gaps = 8/352 (2%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
++HA +++ G H+ + N ++S Y+ CG A+++ D + ++SW+++I+G+ ++
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
+ A F M V+ + +T+ +L ACS ++ G+ +HGM + G +
Sbjct: 284 ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSAT 343
Query: 190 NTLVVMYAK--CGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
N L+ MY + G + D+ LF S+ + ++SWN++ + + Q +AV F +
Sbjct: 344 NALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE 403
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
I+ ++++ S +L +C+ L ++F ++L+ MYSK G IE+A
Sbjct: 404 IKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESAR 463
Query: 308 AVFEEITHP-DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
F++I+ V+WNA+I G QH +L L ++M + + T ++ L AC+
Sbjct: 464 KCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHT 523
Query: 367 GFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
G G +L + + KI + + A +D+ + +++ A+ + E MP
Sbjct: 524 GLIQEGLELLNLMEPVYKIQPRMEHYAAA--VDLLGRAGLVNKAKELIESMP 573
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 169/353 (47%), Gaps = 5/353 (1%)
Query: 72 HAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGF 131
H + I+ G D N ++ Y K G GYA L D+ + D V SW+ +ISGY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSV-SWNTMISGYTSCGK 81
Query: 132 GKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANT 191
++A F M G + ++F +LK + K ++G +VHG+ + G++ + +V ++
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 192 LVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM-VRGGIRP 250
LV MYAKC ++ D+ + F I P+ VSWNAL + +VQ A L M ++ +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
+ + + +L + + NA++ Y+ G + +A VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 311 EEI-THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK 369
+ + D++SWN++IAG +HE + A L +M+ +++T + L AC+ +
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 370 DLGRQLHSCLIKIDTDSDFFVAVGLIDMYSK--CEMLSDARRVYELMPKKDII 420
G+ LH +IK + LI MY + + DA ++E + KD+I
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 175/375 (46%), Gaps = 44/375 (11%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSK--CGRFGYARKLVD 108
+YT LLS C + G LH +I+ G S N L+S+Y + G A L +
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE 366
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
D++ SW+++I+G+ Q G ++A+ F+ + +K +++ F ++L++CS L
Sbjct: 367 SLKSKDLI-SWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQ 425
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP-SVVSWNALFSCY 227
+G+++H ++ +GF S+ FV ++L+VMY+KCG + +RK F I + S V+WNA+ Y
Sbjct: 426 LGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGY 485
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXXX 284
Q ++DLF +M ++ + + + IL AC+ ++ G
Sbjct: 486 AQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPR 545
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+ ++A VD+ + G + A + E + LN
Sbjct: 546 MEHYAAA--VDLLGRAGLVNKAKELIESMP--------------------------LN-- 575
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
P+ + + L C A G ++ Q+ + L++I+ + D F V L MYS +
Sbjct: 576 ------PDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPE-DHFTYVSLSHMYSDLKKW 628
Query: 405 SDARRVYELMPKKDI 419
+ V ++M ++ +
Sbjct: 629 EEKASVKKMMKERGV 643
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 185/421 (43%), Gaps = 71/421 (16%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
+ HA +++ G +D L++ YS F A LV QS + S+S+LI +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDA-DLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
+++ F+ M G+ + P++ K C+ +G+++H +S V+G D D FV
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 190 NTLVVMYAKCGQLGDSRKLF-----------------------------------GSIVA 214
++ MY +CG++GD+RK+F S +
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
++VSWN + S + +S + EAV +F+++ G P++ ++S +L + +
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF------------------------ 310
D+ +A++DMY K G + +++F
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 311 -----------EEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSA 359
E+ ++VSW ++IAGC Q+ + AL L EM+ +G PN TI S
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 360 LKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
L AC + GR H +++ + V LIDMY+KC ++ ++ V+ +MP K++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 420 I 420
+
Sbjct: 455 V 455
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 164/388 (42%), Gaps = 69/388 (17%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTET 113
NL C + +G ++H G D + + +Y +CGR G ARK+ D+ ++
Sbjct: 121 NLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK 180
Query: 114 DVV----------------------------------VSWSALISGYVQNGFGKEALLAF 139
DVV VSW+ ++SG+ ++G+ KEA++ F
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 140 NDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC 199
+ LG ++ T SVL + + LNMGR +HG + G D V + ++ MY K
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 200 GQL-----------------------GDSR-----------KLFGS-IVAPSVVSWNALF 224
G + G SR +LF + +VVSW ++
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
+ Q+ +EA++LF+EM G++PN ++ +L AC +
Sbjct: 361 AGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL 420
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+ +AL+DMY+K GRI + VF + ++V WN+++ G H +++ +
Sbjct: 421 DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL 480
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLG 372
+ P+ + +S L AC VG D G
Sbjct: 481 MRTRLKPDFISFTSLLSACGQVGLTDEG 508
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 148/322 (45%), Gaps = 40/322 (12%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF---- 100
F ++ +++L S+ L +G +H ++I+ G D + ++ +Y K G
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307
Query: 101 -------------------GYARK-LVDQSTETDV----------VVSWSALISGYVQNG 130
G +R LVD++ E VVSW+++I+G QNG
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVAN 190
EAL F +M + GVK N T PS+L AC L GR HG +V + V +
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGS 427
Query: 191 TLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
L+ MYAKCG++ S+ +F + ++V WN+L + + E + +F+ ++R ++P
Sbjct: 428 ALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 251 NEFSLSIILNACA--GLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
+ S + +L+AC GL + G + +S +V++ + G+++ A
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYS--CMVNLLGRAGKLQEAY 545
Query: 308 AVFEEIT-HPDIVSWNAVIAGC 328
+ +E+ PD W A++ C
Sbjct: 546 DLIKEMPFEPDSCVWGALLNSC 567
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ ++L C +L G H +R + + L+ +Y+KCGR + ++V
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLS-QIVFN 447
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
T +V W++L++G+ +G KE + F + +K + +F S+L AC +
Sbjct: 448 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507
Query: 170 GRKVHG-MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF-SC 226
G K MS G + +V + + G+L ++ L + P W AL SC
Sbjct: 508 GWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 567
Query: 227 YVQSD 231
+Q++
Sbjct: 568 RLQNN 572
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 180/398 (45%), Gaps = 35/398 (8%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S+ +L +L GMELH + DP + +Y+ CGR YAR + D+
Sbjct: 113 SFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEM 172
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ DVV +W+ +I Y + G EA F +M V +E +++ AC ++
Sbjct: 173 SHRDVV-TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 171 RKVHGM--------------SVVTGFDSDG-----------------FVANTLVVMYAKC 199
R ++ ++VT + G FV+ +V Y+KC
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 291
Query: 200 GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
G+L D++ +F +V W + S YV+SD+ EA+ +F+EM GI+P+ S+ ++
Sbjct: 292 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIV 319
+ACA L + NAL++MY+K G ++ VFE++ ++V
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411
Query: 320 SWNAVIAGCVQH-ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSC 378
SW+++I H E +D AL+L MK PN T L C+ G + G+++ +
Sbjct: 412 SWSSMINALSMHGEASD-ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 379 LIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYELMP 415
+ + G ++D++ + +L +A V E MP
Sbjct: 471 MTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP 508
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 184/407 (45%), Gaps = 34/407 (8%)
Query: 48 PPISYT---NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
PPI+ T +L + KSL +LHAH++R +H + +S+ S YA
Sbjct: 5 PPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYAL 64
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
+ + ++ + ++ + +L + + +G + ++F+F +LKA S
Sbjct: 65 NVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKV 124
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
L G ++HG++ D FV + MYA CG++ +R +F + VV+WN +
Sbjct: 125 SALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMI 184
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRN----------------- 267
Y + EA LF+EM + P+E L I++AC N
Sbjct: 185 ERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVR 244
Query: 268 --------------GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
G+ + F + A+V YSK GR+++A +F++
Sbjct: 245 MDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT 304
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
D+V W +I+ V+ + AL + EM SG P+V ++ S + ACA +G D +
Sbjct: 305 EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAK 364
Query: 374 QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+HSC+ +S+ + LI+MY+KC L R V+E MP+++++
Sbjct: 365 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 156/333 (46%), Gaps = 41/333 (12%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
+VS YSKCGR A+ + DQ+ + D+V W+ +IS YV++ + +EAL F +MC G+K
Sbjct: 284 MVSGYSKCGRLDDAQVIFDQTEKKDLVC-WTTMISAYVESDYPQEALRVFEEMCCSGIKP 342
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
+ + SV+ AC+ L+ + VH V G +S+ + N L+ MYAKCG L +R +F
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-R 266
+ +VVSW+++ + +A+ LF M + + PNE + +L C +GL
Sbjct: 403 EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
G + + +VD++ + + A+ V E + V+ N VI
Sbjct: 463 EGKKIFASMTDEYNITPKLEHYG--CMVDLFGRANLLREALEVIESMP----VASNVVIW 516
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDS 386
G S + AC G +LG+ +++++ D
Sbjct: 517 G------------------------------SLMSACRIHGELELGKFAAKRILELEPDH 546
Query: 387 DFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
D + + + ++Y++ + D R + +M +K++
Sbjct: 547 DGALVL-MSNIYAREQRWEDVRNIRRVMEEKNV 578
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Query: 36 VSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYS 95
V C +S +++S C L +H+ + G + S N L+++Y+
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 96 KCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFP 155
KCG R + ++ + VVSWS++I+ +G +AL F M V+ NE TF
Sbjct: 391 KCGGLDATRDVFEKMPRRN-VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFV 449
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANT--LVVMYAKCGQLGDSRKLFGSI- 212
VL CS + G+K+ S+ ++ + + +V ++ + L ++ ++ S+
Sbjct: 450 GVLYGCSHSGLVEEGKKIFA-SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP 508
Query: 213 VAPSVVSWNALFS-CYVQSDF 232
VA +VV W +L S C + +
Sbjct: 509 VASNVVIWGSLMSACRIHGEL 529
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 13/385 (3%)
Query: 35 VVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLV--S 92
+ S+ CF+S + + L C + K L +++H + +D + LV S
Sbjct: 2 IWSSDSCFKSRKHQCLIFLKL---CSSIKHL---LQIHGQIHLSSLQNDSFIISELVRVS 55
Query: 93 LYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEF 152
S +AR L+ S+++ +W+ L GY + E++ +++M G+K N+
Sbjct: 56 SLSLAKDLAFARTLLLHSSDS-TPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKL 114
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
TFP +LKAC+ L GR++ + GFD D +V N L+ +Y C + D+RK+F +
Sbjct: 115 TFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM 174
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX 272
+VVSWN++ + V++ + F EM+ P+E ++ ++L+AC G N S
Sbjct: 175 TERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGK 232
Query: 273 XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHE 332
+ ALVDMY+K G +E A VFE + ++ +W+A+I G Q+
Sbjct: 233 LVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYG 292
Query: 333 CNDWALALLNE-MKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVA 391
+ AL L ++ MK S PN T L AC+ G D G + + KI +
Sbjct: 293 FAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIH 352
Query: 392 VG-LIDMYSKCEMLSDARRVYELMP 415
G ++D+ + L++A + MP
Sbjct: 353 YGAMVDILGRAGRLNEAYDFIKKMP 377
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 158/329 (48%), Gaps = 18/329 (5%)
Query: 18 PQTIHTTSRTIVDSQTNVVS---NSQCFQSFTKP-PISYTNLLSQCVASKSLTLGMELHA 73
P T + SR S + V S S+ + KP +++ LL C + LT G ++
Sbjct: 78 PSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQV 137
Query: 74 HLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGK 133
+++ GF D N+L+ LY C + ARK+ D+ TE +VV SW+++++ V+NG
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVV-SWNSIMTALVENG--- 193
Query: 134 EALLAFNDMC-MLGVK--CNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVAN 190
+ L F C M+G + +E T +L AC +L++G+ VH +V + + +
Sbjct: 194 KLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGT 251
Query: 191 TLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR-GGIR 249
LV MYAK G L +R +F +V +V +W+A+ Q F EA+ LF +M++ +R
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 250 PNEFSLSIILNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
PN + +L AC+ GL + A+VD+ + GR+ A
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPM-MIHYGAMVDILGRAGRLNEAY 370
Query: 308 AVFEEIT-HPDIVSWNAVIAGCVQHECND 335
+++ PD V W +++ C H D
Sbjct: 371 DFIKKMPFEPDAVVWRTLLSACSIHHDED 399
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 11/266 (4%)
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLV----VMYAKCGQLGDSRKLFGSIV 213
LK CS K L ++HG ++ +D F+ + LV + AK + L S
Sbjct: 20 LKLCSSIKHL---LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDS 76
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXX 273
PS +WN L Y SD VE++ ++ EM R GI+PN+ + +L ACA +
Sbjct: 77 TPS--TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHEC 333
D + N L+ +Y + +A VF+E+T ++VSWN+++ V++
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
+ EM CP+ T+ L AC G LG+ +HS ++ + + + +
Sbjct: 195 LNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTA 252
Query: 394 LIDMYSKCEMLSDARRVYELMPKKDI 419
L+DMY+K L AR V+E M K++
Sbjct: 253 LVDMYAKSGGLEYARLVFERMVDKNV 278
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 320 SWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL 379
+WN + G + ++ + +EMK G PN T LKACA+ GRQ+ +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 380 IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+K D D +V LI +Y C+ SDAR+V++ M +++++
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVV 180
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 179/395 (45%), Gaps = 63/395 (15%)
Query: 73 AHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFG 132
A ++RF + D R+ YA K+ +Q + + SW+ +I G+ ++
Sbjct: 59 AEILRFCATSDLHHRD-----------LDYAHKIFNQMPQRNCF-SWNTIIRGFSESDED 106
Query: 133 KEALLA----FNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFV 188
K AL+A + M V+ N FTFPSVLKAC+ + G+++HG+++ GF D FV
Sbjct: 107 K-ALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFV 165
Query: 189 ANTLVVMYAKCGQLGDSRKLF-------------------GSIV---------------- 213
+ LV MY CG + D+R LF G IV
Sbjct: 166 MSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCK 225
Query: 214 ----------APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
SVVSWN + S Y + F +AV++F+EM +G IRPN +L +L A +
Sbjct: 226 AARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAIS 285
Query: 264 GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNA 323
L + D +AL+DMYSK G IE A+ VFE + ++++W+A
Sbjct: 286 RLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSA 345
Query: 324 VIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID 383
+I G H A+ +M+ +G P+ + L AC+ G + GR+ S ++ +D
Sbjct: 346 MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVD 405
Query: 384 TDSDFFVAVG-LIDMYSKCEMLSDARRVYELMPKK 417
G ++D+ + +L +A MP K
Sbjct: 406 GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK 440
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 143/335 (42%), Gaps = 53/335 (15%)
Query: 44 SFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCG---- 98
F +P ++ ++L C + + G ++H +++GF D ++LV +Y CG
Sbjct: 122 EFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKD 181
Query: 99 --------------------------------------RFG---YARKLVDQSTETDVVV 117
R G AR L D+ + VV
Sbjct: 182 ARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV- 240
Query: 118 SWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMS 177
SW+ +ISGY NGF K+A+ F +M ++ N T SVL A S L +G +H +
Sbjct: 241 SWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA 300
Query: 178 VVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAV 237
+G D + + L+ MY+KCG + + +F + +V++W+A+ + + +A+
Sbjct: 301 EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAI 360
Query: 238 DLFKEMVRGGIRPNEFSLSIILNACA--GL-RNGSXXXXXXXXXXXXXXXXDQFSANALV 294
D F +M + G+RP++ + +L AC+ GL G + + +V
Sbjct: 361 DCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYG--CMV 418
Query: 295 DMYSKGGRIENAVA-VFEEITHPDIVSWNAVIAGC 328
D+ + G ++ A + PD V W A++ C
Sbjct: 419 DLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 453
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECND--WALALLNEMKSSGAC-PNVFTISSA 359
++ A +F ++ + SWN +I G + + + A+ L EM S PN FT S
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 360 LKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV-YELMPKKD 418
LKACA G G+Q+H +K D FV L+ MY C + DAR + Y+ + +KD
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 419 II 420
++
Sbjct: 195 MV 196
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 9/200 (4%)
Query: 40 QCFQSFTKPPI--SYTNLLSQCVASK---SLTLGMELHAHLIRFGFSHDPSFRNHLVSLY 94
+ F+ K I +Y L+S A SL LG LH + G D + L+ +Y
Sbjct: 260 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 319
Query: 95 SKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTF 154
SKCG A + ++ + V++WSA+I+G+ +G +A+ F M GV+ ++ +
Sbjct: 320 SKCGIIEKAIHVFERLPREN-VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAY 378
Query: 155 PSVLKACSIKKDLNMGRKVHGMSV-VTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI- 212
++L ACS + GR+ V V G + +V + + G L ++ + ++
Sbjct: 379 INLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Query: 213 VAPSVVSWNALF-SCYVQSD 231
+ P V W AL +C +Q +
Sbjct: 439 IKPDDVIWKALLGACRMQGN 458
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 167/323 (51%), Gaps = 9/323 (2%)
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
L ++ + V SW+++I+ ++G EALLAF+ M L + +FP +KACS
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
D+ G++ H + V G+ SD FV++ L+VMY+ CG+L D+RK+F I ++VSW ++
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 226 CYVQSDFCVEAVDLFKEMV------RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
Y + ++AV LFK+++ + + L +++AC+ +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVA--VFEEITHPDIVSWNAVIAGCVQHECNDWA 337
N L+D Y+KGG AVA +F++I D VS+N++++ Q ++ A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 338 LALLNEM-KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLID 396
+ + K+ N T+S+ L A + G +G+ +H +I++ + D V +ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 397 MYSKCEMLSDARRVYELMPKKDI 419
MY KC + AR+ ++ M K++
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNV 353
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 150/313 (47%), Gaps = 16/313 (5%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G + H FG+ D + L+ +YS CG+ ARK+ D+ + ++V SW+++I GY
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV-SWTSMIRGYD 153
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTF------PSVLKACSIKKDLNMGRKVHGMSVVTG 181
NG +A+ F D+ + ++ F SV+ ACS + +H + G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 182 FDSDGFVANTLVVMYAKCGQLGDS--RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDL 239
FD V NTL+ YAK G+ G + RK+F IV VS+N++ S Y QS EA ++
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 240 FKEMVRGGIRP-NEFSLSIILNACA---GLRNGSXXXXXXXXXXXXXXXXDQFSANALVD 295
F+ +V+ + N +LS +L A + LR G D +++D
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED---DVIVGTSIID 330
Query: 296 MYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFT 355
MY K GR+E A F+ + + ++ SW A+IAG H AL L M SG PN T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 356 ISSALKACAAVGF 368
S L AC+ G
Sbjct: 391 FVSVLAACSHAGL 403
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 147/305 (48%), Gaps = 13/305 (4%)
Query: 53 TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA--RKLVDQS 110
+++S C + L +H+ +I+ GF S N L+ Y+K G G A RK+ DQ
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC-NEFTFPSVLKACSIKKDLNM 169
+ D V S+++++S Y Q+G EA F + V N T +VL A S L +
Sbjct: 247 VDKDRV-SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI 305
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G+ +H + G + D V +++ MY KCG++ +RK F + +V SW A+ + Y
Sbjct: 306 GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGM 365
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLR-NGSXXXXXXXXXXXXXXXXD 286
+A++LF M+ G+RPN + +L AC AGL G +
Sbjct: 366 HGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH---ECNDWALALLN 342
+ +VD+ + G ++ A + + + PD + W++++A C H E + ++A L
Sbjct: 426 HY--GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 343 EMKSS 347
E+ SS
Sbjct: 484 ELDSS 488
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I+ + +L S +L +G +H +IR G D ++ +Y KCGR ARK D+
Sbjct: 288 ITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR 347
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ V SW+A+I+GY +G +AL F M GV+ N TF SVL ACS +
Sbjct: 348 MKNKN-VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS-----HA 401
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G V G A G+ G V P + + + +
Sbjct: 402 GLHVEGWRWFN----------------AMKGRFG---------VEPGLEHYGCMVDLLGR 436
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRN 267
+ F +A DL + M ++P+ S +L AC +N
Sbjct: 437 AGFLQKAYDLIQRM---KMKPDSIIWSSLLAACRIHKN 471
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 304 ENAVAVFEE-ITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
+N +F + D+ SWN+VIA + + AL + M+ P + A+KA
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 363 CAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
C+++ G+Q H SD FV+ LI MYS C L DAR+V++ +PK++I+
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 172/363 (47%), Gaps = 24/363 (6%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
+HAHLI+ F D V ++ KC YA K+ ++ E D +W+A++SG+ Q+G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDAT-TWNAMLSGFCQSG 132
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVAN 190
+A F +M + + + T +++++ S +K L + +H + + G D VAN
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 191 TLVVMYAKCGQLGDSRKLFGSIVA--PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI 248
T + Y KCG L ++ +F +I +VVSWN++F Y +A L+ M+R
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 249 RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX---XXXDQFSANALVDMYSKGGRIEN 305
+P+ LS +N A +N D + N + MYSK +
Sbjct: 253 KPD---LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
A +F+ +T VSW +I+G + D ALAL + M SG P++ T+ S + C
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Query: 366 VGFKDLGRQLHSCLIKIDTDSDFF--------VAVGLIDMYSKCEMLSDARRVYELMPKK 417
G + G+ ID +D + + LIDMYSKC + +AR +++ P+K
Sbjct: 370 FGSLETGKW-------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK 422
Query: 418 DII 420
++
Sbjct: 423 TVV 425
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 147/338 (43%), Gaps = 8/338 (2%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
T ++ L+ KSL L +HA IR G + N +S Y KCG
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 102 YARKLVDQSTETD-VVVSWSALISGYVQNGFGKEALLAFNDMCML---GVKCNEFTFPSV 157
A+ + + D VVSW+++ Y G EA AF C++ K + TF ++
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFG---EAFDAFGLYCLMLREEFKPDLSTFINL 262
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV 217
+C + L GR +H ++ G D D NT + MY+K +R LF + + +
Sbjct: 263 AASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTC 322
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXX 277
VSW + S Y + EA+ LF M++ G +P+ +L +++ C +
Sbjct: 323 VSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDAR 382
Query: 278 XXXXXXXXDQ-FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW 336
D NAL+DMYSK G I A +F+ +V+W +IAG +
Sbjct: 383 ADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLE 442
Query: 337 ALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQ 374
AL L ++M PN T + L+ACA G + G +
Sbjct: 443 ALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE 480
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 136/309 (44%), Gaps = 12/309 (3%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
V +W+ I V E+LL F +M G + N FTFP V KAC+ D+ VH
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVE 235
+ + F SD FV V M+ KC + + K+F + +WNA+ S + QS +
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 236 AVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVD 295
A LF+EM I P+ ++ ++ + + ++ AN +
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIS 196
Query: 296 MYSKGGRIENAVAVFEEITHPD--IVSWNAVI-AGCVQHECND----WALALLNEMKSSG 348
Y K G +++A VFE I D +VSWN++ A V E D + L L E K
Sbjct: 197 TYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK--- 253
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
P++ T + +C GR +HS I + TD D I MYSK E AR
Sbjct: 254 --PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 409 RVYELMPKK 417
++++M +
Sbjct: 312 LLFDIMTSR 320
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%)
Query: 206 RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL 265
R+L+ SV +WN V + VE++ LF+EM RGG PN F+ + ACA L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
+ D F A VDM+ K ++ A VFE + D +WNA++
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTD 385
+G Q D A +L EM+ + P+ T+ + +++ + L +H+ I++ D
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
VA I Y KC L A+ V+E + + D
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 166/337 (49%), Gaps = 10/337 (2%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N L+SLY+KCG+ A KL D+ DV+ S + + G+++N + + M G
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVI-SQNIVFYGFLRNRETESGFVLLKRMLGSG- 151
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+ T VL C + + + +H +++++G+D + V N L+ Y KCG R
Sbjct: 152 GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRN 267
+F + +V++ A+ S ++++ + + LF M RG + PN + L AC+G +
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 268 GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAG 327
+ +AL+DMYSK G IE+A +FE T D VS ++ G
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 328 CVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD----LGRQLHSCLIKID 383
Q+ + A+ M +G + +S+ L V F D LG+QLHS +IK
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL----GVSFIDNSLGLGKQLHSLVIKRK 387
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ FV GLI+MYSKC L+D++ V+ MPK++ +
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYV 424
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 6/370 (1%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+ T +LS C + + +HA I G+ + S N L++ Y KCG R + D
Sbjct: 157 TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGM 216
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ +V+ + +A+ISG ++N ++ L F+ M V N T+ S L ACS + + G
Sbjct: 217 SHRNVI-TLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEG 275
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+++H + G +S+ + + L+ MY+KCG + D+ +F S VS + Q+
Sbjct: 276 QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQN 335
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
EA+ F M++ G+ + +S +L + + F
Sbjct: 336 GSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVN 395
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
N L++MYSK G + ++ VF + + VSWN++IA +H AL L EM +
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDA 407
P T S L AC+ VG D GR+L + + + I+ ++ + + IDM + +L +A
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCI--IDMLGRAGLLKEA 513
Query: 408 RRVYELMPKK 417
+ + +P K
Sbjct: 514 KSFIDSLPLK 523
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 142/286 (49%), Gaps = 7/286 (2%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++Y + L+ C S+ + G ++HA L ++G + + L+ +YSKCG A + +
Sbjct: 257 VTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+TE D V S + ++ G QNG +EA+ F M GV+ + +VL I L +
Sbjct: 317 TTEVDEV-SMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G+++H + + F + FV N L+ MY+KCG L DS+ +F + + VSWN++ + + +
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXXXXD 286
+ A+ L++EM ++P + + +L+AC+ + G +
Sbjct: 436 HGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTE 495
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH 331
++ ++DM + G ++ A + + + PD W A++ C H
Sbjct: 496 HYT--CIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFH 539
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 3/226 (1%)
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV-RG 246
V N+L+ +YAKCG+L D+ KLF + V+S N +F ++++ L K M+ G
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
G + +L+I+L+ C + N L+ Y K G +
Sbjct: 152 GF--DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
VF+ ++H ++++ AVI+G +++E ++ L L + M+ PN T SAL AC+
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 367 GFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
G+Q+H+ L K +S+ + L+DMYSKC + DA ++E
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 203/450 (45%), Gaps = 52/450 (11%)
Query: 12 NSLSFKPQTIHTTSRTIV-DSQTNVVS--NSQCFQSFTKPPISYT-----NLLSQCVASK 63
N+ S+ I TSR + D+ + +S S C+ S P S + LS C
Sbjct: 87 NAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFW 146
Query: 64 SLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALI 123
+L ++H +IR GF D N +++ Y+KC ARK+ D+ +E DVV SW+++I
Sbjct: 147 LGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVV-SWNSMI 205
Query: 124 SGYVQNGFGKE------ALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMS 177
SGY Q+G ++ A+LA +D K N T SV +AC DL G +VH
Sbjct: 206 SGYSQSGSFEDCKKMYKAMLACSDF-----KPNGVTVISVFQACGQSSDLIFGLEVHKKM 260
Query: 178 VVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF-----------GSIVAPSVV-------- 218
+ D + N ++ YAKCG L +R LF G+I++ +
Sbjct: 261 IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAM 320
Query: 219 ------------SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR 266
+WNA+ S +Q++ E ++ F+EM+R G RPN +LS +L +
Sbjct: 321 ALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSS 380
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
N + + +++D Y+K G + A VF+ +++W A+I
Sbjct: 381 NLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIIT 440
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQL-HSCLIKIDTD 385
H +D A +L ++M+ G P+ T+++ L A A G D+ + + S L K D +
Sbjct: 441 AYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIE 500
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
++ + S+ LSDA MP
Sbjct: 501 PGVEHYACMVSVLSRAGKLSDAMEFISKMP 530
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 178/395 (45%), Gaps = 46/395 (11%)
Query: 69 MELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQ 128
++LHA ++ F D + L+S Y++ RF A + D+ T + S++AL+ Y
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAF-SYNALLIAYTS 100
Query: 129 NGFGKEALLAFNDMCMLGVKC--------NEFTFPSVLKACSIKKDLNMG---RKVHGMS 177
+A F + +G C + + VLKA S D +G R+VHG
Sbjct: 101 REMYFDAFSLF--LSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 178 VVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAV 237
+ GFDSD FV N ++ Y KC + +RK+F + VVSWN++ S Y QS +
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 238 DLFKEMVR-GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
++K M+ +PN ++ + AC + D NA++
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGF 278
Query: 297 YSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS---------- 346
Y+K G ++ A A+F+E++ D V++ A+I+G + H A+AL +EM+S
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMI 338
Query: 347 ---------------------SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTD 385
G+ PN T+SS L + G+++H+ I+ D
Sbjct: 339 SGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGAD 398
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
++ +V +ID Y+K L A+RV++ + +I
Sbjct: 399 NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLI 433
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 1/332 (0%)
Query: 44 SFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
SF +Y L+ C+ KS+ ++ ++ GF + N ++ ++ KCG A
Sbjct: 118 SFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDA 177
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
R+L D+ E ++ S+ ++ISG+V G EA F M C TF +L+A +
Sbjct: 178 RRLFDEIPERNLY-SYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAG 236
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNAL 223
+ +G+++H ++ G + FV+ L+ MY+KCG + D+R F + + V+WN +
Sbjct: 237 LGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNV 296
Query: 224 FSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXX 283
+ Y + EA+ L +M G+ ++F+LSI++ L
Sbjct: 297 IAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF 356
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNE 343
+ + ALVD YSK GR++ A VF+++ +I+SWNA++ G H A+ L +
Sbjct: 357 ESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEK 416
Query: 344 MKSSGACPNVFTISSALKACAAVGFKDLGRQL 375
M ++ PN T + L ACA G + G ++
Sbjct: 417 MIAANVAPNHVTFLAVLSACAYSGLSEQGWEI 448
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 143/268 (53%)
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
T+ ++++AC K + ++V+G + GF+ + ++ N +++M+ KCG + D+R+LF I
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX 272
++ S+ ++ S +V VEA +LFK M + +++L A AGL +
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 273 XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHE 332
+ F + L+DMYSK G IE+A FE + V+WN VIAG H
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 333 CNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV 392
++ AL LL +M+ SG + FT+S ++ + +L +Q H+ LI+ +S+
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 393 GLIDMYSKCEMLSDARRVYELMPKKDII 420
L+D YSK + AR V++ +P+K+II
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNII 392
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 7/286 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++ +L S+ +G +LH ++ G + L+ +YSKCG AR +
Sbjct: 226 TFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECM 285
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
E V+W+ +I+GY +G+ +EAL DM GV ++FT +++ + L +
Sbjct: 286 PEK-TTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELT 344
Query: 171 RKVHGMSVVTGFDSDGFVANT-LVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
++ H + GF+S+ VANT LV Y+K G++ +R +F + +++SWNAL Y
Sbjct: 345 KQAHASLIRNGFESE-IVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYAN 403
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GLRNGSXXXXXXXXXXXXXXXXDQ 287
+AV LF++M+ + PN + +L+ACA GL
Sbjct: 404 HGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAM 463
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVS-WNAVIAGCVQHE 332
A ++++ + G ++ A+A V+ W A++ C E
Sbjct: 464 HYA-CMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQE 508
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 165/357 (46%), Gaps = 41/357 (11%)
Query: 65 LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALIS 124
++L +LH ++ + GF + N L+ Y A K+ D+ + DV+ SW++L+S
Sbjct: 71 VSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVI-SWNSLVS 129
Query: 125 GYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
GYVQ+G +E + F ++ V NEF+F + L AC+ +G +H V G +
Sbjct: 130 GYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEK 189
Query: 185 DGFV-ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
V N L+ MY KCG + D+ +F + VSWNA+ + ++ + F +M
Sbjct: 190 GNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Query: 244 VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI 303
PN D + N L+D + K G
Sbjct: 250 ------PNP---------------------------------DTVTYNELIDAFVKSGDF 270
Query: 304 ENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
NA V ++ +P+ SWN ++ G V E + A +M SSG + +++S L A
Sbjct: 271 NNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAV 330
Query: 364 AAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
AA+ G +H+C K+ DS VA LIDMYSKC ML A ++ MP+K++I
Sbjct: 331 AALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLI 387
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 8/252 (3%)
Query: 118 SWSALISGYVQNGFGKEALL-AFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGM 176
SWS ++ + FG +L A ++ G K + +L+ +++ R++HG
Sbjct: 23 SWSTIVPALAR--FGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 177 SVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEA 236
GF S+ ++N+L+ Y L D+ K+F + P V+SWN+L S YVQS E
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 237 VDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX-XXXXXXXXXXXXXDQFSANALVD 295
+ LF E+ R + PNEFS + L ACA L + N L+D
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 296 MYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFT 355
MY K G +++AV VF+ + D VSWNA++A C ++ + L ++M + P+ T
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVT 256
Query: 356 ISSALKACAAVG 367
+ + A G
Sbjct: 257 YNELIDAFVKSG 268
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 24/336 (7%)
Query: 40 QCFQSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRFG-FSHDPSFRNHLVSLYSKC 97
+ F P IS+ +L+S V S G+ L L R F ++ SF L + C
Sbjct: 111 KVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA----C 166
Query: 98 GRFGYA-------RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCN 150
R + KLV E VV + LI Y + GF +A+L F M + +
Sbjct: 167 ARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM----EEKD 222
Query: 151 EFTFPSVLKACSIKKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
++ +++ +CS L +G H M + D N L+ + K G ++ ++
Sbjct: 223 TVSWNAIVASCSRNGKLELGLWFFHQMP-----NPDTVTYNELIDAFVKSGDFNNAFQVL 277
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGS 269
+ P+ SWN + + YV S+ EA + F +M G+R +E+SLSI+L A A L
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVP 337
Query: 270 XXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCV 329
A+AL+DMYSK G +++A +F + +++ WN +I+G
Sbjct: 338 WGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYA 397
Query: 330 QHECNDWALALLNEMKSSGAC-PNVFTISSALKACA 364
++ + A+ L N++K P+ FT + L C+
Sbjct: 398 RNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 168/371 (45%), Gaps = 39/371 (10%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F P SY L C L ++H +I+ ++D L+S+ S G YA
Sbjct: 18 FRSPEASY--FLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYA- 71
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCM-LGVKCNEFTFPSVLKACSI 163
LV ++ +W+ +I N +EALL F M + + ++FTFP V+KAC
Sbjct: 72 SLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLA 131
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPS------- 216
+ +G +VHG+++ GF +D F NTL+ +Y KCG+ RK+F + S
Sbjct: 132 SSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTM 191
Query: 217 ------------------------VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNE 252
VVSW A+ + YV++ EA LF+ M ++PNE
Sbjct: 192 LYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNE 251
Query: 253 FSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE 312
F++ +L A L + S D F AL+DMYSK G +++A VF+
Sbjct: 252 FTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDV 311
Query: 313 ITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC-PNVFTISSALKACAAVGFKDL 371
+ + +WN++I H C + AL+L EM+ + P+ T L ACA G
Sbjct: 312 MQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKD 371
Query: 372 GRQLHSCLIKI 382
G + + +I++
Sbjct: 372 GLRYFTRMIQV 382
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 128/264 (48%), Gaps = 36/264 (13%)
Query: 35 VVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY 94
++S+ F FT P + + C+AS S+ LG ++H I+ GF +D F+N L+ LY
Sbjct: 110 MISHQSQFDKFTFPFV-----IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLY 164
Query: 95 SKCGRFGYARKLVDQSTETDVV------------------------------VSWSALIS 124
KCG+ RK+ D+ +V VSW+A+I+
Sbjct: 165 FKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMIT 224
Query: 125 GYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
YV+N EA F M + VK NEFT ++L+A + L+MGR VH + GF
Sbjct: 225 AYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVL 284
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLF-KEM 243
D F+ L+ MY+KCG L D+RK+F + S+ +WN++ + EA+ LF +
Sbjct: 285 DCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEME 344
Query: 244 VRGGIRPNEFSLSIILNACAGLRN 267
+ P+ + +L+ACA N
Sbjct: 345 EEASVEPDAITFVGVLSACANTGN 368
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 35/294 (11%)
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV 217
L+ CS + + +++H + +D + L+ + + G+ + +F + +PS
Sbjct: 27 LRTCS---NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 218 VSWNALFSCYVQSDFCVEAVDLF-KEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXX 276
+WN + + EA+ LF M+ + ++F+ ++ AC +
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGR-------------------------------IEN 305
D F N L+D+Y K G+ +++
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
A VF ++ ++VSW A+I V++ D A L M+ PN FTI + L+A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 366 VGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+G +GR +H K D F+ LIDMYSKC L DAR+V+++M K +
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGC-VQHECNDWALALLNEM 344
DQ L+ + S G + A VF ++ P +WN +I V H+ + L + M
Sbjct: 51 DQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMM 110
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
S + + FT +KAC A LG Q+H IK +D F L+D+Y KC
Sbjct: 111 ISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKP 170
Query: 405 SDARRVYELMPKKDII 420
R+V++ MP + I+
Sbjct: 171 DSGRKVFDKMPGRSIV 186
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 170/374 (45%), Gaps = 15/374 (4%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTET 113
NL+S+C KSL ++HA +I G SH + L+ L S YA ++ Q
Sbjct: 14 NLISKC---KSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNP 69
Query: 114 DVVVSWSALISGYVQNGFGKEALLAFN--DMCMLG----VKCNEFTFPSVLKACSIKKDL 167
V + ++ LIS V N + LAF+ D + V+ NEFT+PS+ KA
Sbjct: 70 SVFL-YNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQW 128
Query: 168 NM-GRKVHG--MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
+ GR +H + + + D FV LV YA CG+L ++R LF I P + +WN L
Sbjct: 129 HRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLL 188
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
+ Y S+ ++ +R +RPNE SL ++ +CA L
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+QF +L+D+YSK G + A VF+E++ D+ +NA+I G H + L +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEM 403
S G P+ T + AC+ G D G Q+ + + + G L+D+ +
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 404 LSDARRVYELMPKK 417
L +A + MP K
Sbjct: 369 LEEAEECIKKMPVK 382
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 16/267 (5%)
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
K L +++H + G + + L+ + + L + + I PSV +N L
Sbjct: 20 KSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSVFLYNTLI 78
Query: 225 SCYVQSDFCVE---AVDLFKEMVRGG---IRPNEFSLSIILNAC---AGLRNGSXXXXXX 275
S V + + A L+ +++ +RPNEF+ + A A
Sbjct: 79 SSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAH 138
Query: 276 XXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHE--- 332
D+F ALV Y+ G++ A ++FE I PD+ +WN ++A E
Sbjct: 139 VLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEID 198
Query: 333 CNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV 392
++ L L M+ PN ++ + +K+CA +G G H ++K + + FV
Sbjct: 199 SDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGT 255
Query: 393 GLIDMYSKCEMLSDARRVYELMPKKDI 419
LID+YSKC LS AR+V++ M ++D+
Sbjct: 256 SLIDLYSKCGCLSFARKVFDEMSQRDV 282
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+S L+ C G+ H ++++ + + L+ LYSKCG +ARK+ D+
Sbjct: 217 LSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDE 276
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
++ DV ++A+I G +GFG+E + + + G+ + TF + ACS ++
Sbjct: 277 MSQRDVSC-YNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDE 335
Query: 170 GRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNA-LFSC 226
G ++ + M V G + LV + + G+L ++ + + V P+ W + L S
Sbjct: 336 GLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSS 395
Query: 227 YVQSDF 232
DF
Sbjct: 396 QTHGDF 401
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 145/328 (44%), Gaps = 2/328 (0%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ T S+ L C +++G LH +R GF RN L+ Y CG+
Sbjct: 119 KGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISD 178
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
ARK+ D+ ++ V++S L++GY+Q AL F M V N T S L A S
Sbjct: 179 ARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAIS 238
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
DL+ H + + G D D + L+ MY K G + +R++F + VV+WN
Sbjct: 239 DLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNC 298
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
+ Y ++ E V L ++M ++PN + +L++CA
Sbjct: 299 MIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEER 358
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLN 342
D ALVDMY+K G +E AV +F + D+ SW A+I+G H A+ L N
Sbjct: 359 IALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFN 418
Query: 343 EMKSSG--ACPNVFTISSALKACAAVGF 368
+M+ PN T L AC+ G
Sbjct: 419 KMEEENCKVRPNEITFLVVLNACSHGGL 446
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 167/350 (47%), Gaps = 3/350 (0%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
+H ++++ G D + L++ +S YA + + + T++ + ++ +I GY +
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFM-FNTMIRGYSISD 104
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVAN 190
+ A FN + G+ + F+F + LK+CS + +++G +HG+++ +GF + N
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 191 TLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIR 249
L+ Y CG++ D+RK+F + + V+++ L + Y+Q A+DLF+ M + +
Sbjct: 165 ALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVV 224
Query: 250 PNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAV 309
N +L L+A + L + S D AL+ MY K G I +A +
Sbjct: 225 VNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRI 284
Query: 310 FEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK 369
F+ D+V+WN +I + + + LL +MK PN T L +CA
Sbjct: 285 FDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAA 344
Query: 370 DLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+GR + L + D + L+DMY+K +L A ++ M KD+
Sbjct: 345 FVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDV 394
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 2/250 (0%)
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
++HG V TG D D F + L+ ++ + + +F + ++ +N + Y SD
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
A +F ++ G+ + FS L +C+ S N
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 292 ALVDMYSKGGRIENAVAVFEEITHP-DIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
AL+ Y G+I +A VF+E+ D V+++ ++ G +Q AL L M+ S
Sbjct: 165 ALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVV 224
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
NV T+ S L A + +G H IKI D D + LI MY K +S ARR+
Sbjct: 225 VNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRI 284
Query: 411 YELMPKKDII 420
++ +KD++
Sbjct: 285 FDCAIRKDVV 294
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 170/369 (46%), Gaps = 44/369 (11%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYS---KCGRFGYARKLVDQST 111
+LS +KSLT + HA +++ G HD + LV+ + + YA ++++
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
+ + +++I Y + + AL F +M + V ++++F VLKAC+ GR
Sbjct: 102 SPNGF-THNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
++HG+ + +G +D FV NTLV +Y + G +RK+ + VSWN+L S Y++
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
EA LF EM + S N
Sbjct: 221 LVDEARALFDEMEERNVE---------------------------------------SWN 241
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM-KSSGAC 350
++ Y+ G ++ A VF+ + D+VSWNA++ C + L + N+M S
Sbjct: 242 FMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEK 301
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
P+ FT+ S L ACA++G G +H + K + + F+A L+DMYSKC + A V
Sbjct: 302 PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 411 YELMPKKDI 419
+ K+D+
Sbjct: 362 FRATSKRDV 370
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 42/370 (11%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S+T +L C A G ++H I+ G D N LV++Y + G F ARK++D+
Sbjct: 142 SFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM 201
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
D V SW++L+S Y++ G EA F++M V+ F
Sbjct: 202 PVRDAV-SWNSLLSAYLEKGLVDEARALFDEMEERNVESWNF------------------ 242
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+++G YA G + +++++F S+ VVSWNA+ + Y
Sbjct: 243 -------MISG--------------YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHV 281
Query: 231 DFCVEAVDLFKEMVRGGI-RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
E +++F +M+ +P+ F+L +L+ACA L + S + F
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFL 341
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
A ALVDMYSK G+I+ A+ VF + D+ +WN++I+ H AL + +EM G
Sbjct: 342 ATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF 401
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDAR 408
PN T L AC VG D R+L + + G ++D+ + + +A
Sbjct: 402 KPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAE 461
Query: 409 RVYELMPKKD 418
+ +P +
Sbjct: 462 ELVNEIPADE 471
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 4/212 (1%)
Query: 149 CNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ---LGDS 205
C+ P +L K L ++ H + TG D F A+ LV A + + +
Sbjct: 35 CSSTPVP-ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYA 93
Query: 206 RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL 265
+ I +P+ + N++ Y S A+ +F+EM+ G + P+++S + +L ACA
Sbjct: 94 HSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAF 153
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
D F N LV++Y + G E A V + + D VSWN+++
Sbjct: 154 CGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLL 213
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTIS 357
+ ++ D A AL +EM+ F IS
Sbjct: 214 SAYLEKGLVDEARALFDEMEERNVESWNFMIS 245
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 46 TKPPISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
T+ P +T ++LS C + SL+ G +H ++ + G + LV +YSKCG+ A
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
++ +++ DV +W+++IS +G GK+AL F++M G K N TF VL AC+
Sbjct: 359 LEVFRATSKRDVS-TWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH 417
Query: 164 KKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA 214
L+ RK+ MS V + +V + + G++ ++ +L I A
Sbjct: 418 VGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPA 469
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 286 DQFSANALVDMYSKGGR---IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLN 342
D FSA+ LV + + A ++ I P+ + N+VI + AL +
Sbjct: 70 DTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFR 129
Query: 343 EMKSSGACPNVFTISSALKACAAV-GFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
EM P+ ++ + LKACAA GF++ GRQ+H IK +D FV L+++Y +
Sbjct: 130 EMLLGPVFPDKYSFTFVLKACAAFCGFEE-GRQIHGLFIKSGLVTDVFVENTLVNVYGRS 188
Query: 402 EMLSDARRVYELMPKKDII 420
AR+V + MP +D +
Sbjct: 189 GYFEIARKVLDRMPVRDAV 207
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 172/381 (45%), Gaps = 14/381 (3%)
Query: 43 QSFTKPPI-SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
Q + P + S L C + L ++HA +IR G D + + +S S
Sbjct: 3 QRLSHPSLLSLETLFKLCKSEIHLN---QIHARIIRKGLEQDQNLISIFISSSSSSSSSL 59
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV-KCNEFTFPSVLKA 160
V + + W+ LI GY E + M G+ + +E+TFP V+K
Sbjct: 60 SYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKV 119
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
CS + +G VHG+ + GFD D V + V Y KC L +RK+FG + + VSW
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSW 179
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXX 280
AL YV+S EA +F M + NA S
Sbjct: 180 TALVVAYVKSGELEEAKSMFDLMPERNLGS--------WNALVDGLVKSGDLVNAKKLFD 231
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALAL 340
D S +++D Y+KGG + +A +FEE D+ +W+A+I G Q+ + A +
Sbjct: 232 EMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKV 291
Query: 341 LNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL-IKIDTDSDFFVAVGLIDMYS 399
+EM + P+ F + + AC+ +G +L ++ S L +++ S +V LIDM +
Sbjct: 292 FSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNA 351
Query: 400 KCEMLSDARRVYELMPKKDII 420
KC + A +++E MP++D++
Sbjct: 352 KCGHMDRAAKLFEEMPQRDLV 372
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 172/384 (44%), Gaps = 39/384 (10%)
Query: 49 PISYTN--LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P YT ++ C + + +G +H ++R GF D V Y KC ARK+
Sbjct: 108 PDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKV 167
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
+ E + V SW+AL+ YV++G +EA F+ M + N ++ +++ D
Sbjct: 168 FGEMPERNAV-SWTALVVAYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGD 222
Query: 167 LNMGRKVHGMSVVTGFDS----DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
L +K+ FD D +++ YAK G + +R LF V +W+A
Sbjct: 223 LVNAKKL--------FDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSA 274
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
L Y Q+ EA +F EM ++P+EF + +++AC+ +
Sbjct: 275 LILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQM---GCFELCEKVDSYLH 331
Query: 283 XXXDQFSAN----ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL 338
++FS++ AL+DM +K G ++ A +FEE+ D+VS+ +++ G H C A+
Sbjct: 332 QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAI 391
Query: 339 ALLNEMKSSGACPNVFTISSALKACA-------AVGFKDLGRQLHSCLIKIDTDSDFFVA 391
L +M G P+ + LK C + + +L R+ +S L D S
Sbjct: 392 RLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYS----- 446
Query: 392 VGLIDMYSKCEMLSDARRVYELMP 415
++++ S+ L +A + + MP
Sbjct: 447 -CIVNLLSRTGKLKEAYELIKSMP 469
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 178/397 (44%), Gaps = 33/397 (8%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y L C + +LG + H+++ N + +++ CG ARK+ D+S
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
D+V SW+ LI+GY + G ++A+ + M GVK ++ T ++ +CS+ DLN G
Sbjct: 218 PVRDLV-SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY--- 227
++ + G + N L+ M++KCG + ++R++F ++ ++VSW + S Y
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 228 ----------------------------VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
VQ+ +A+ LF+EM +P+E ++ L
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIV 319
+AC+ L + +LVDMY+K G I A++VF I + +
Sbjct: 397 SACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL 456
Query: 320 SWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL 379
++ A+I G H A++ NEM +G P+ T L AC G GR S +
Sbjct: 457 TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQM 516
Query: 380 I-KIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+ + + ++D+ + +L +A R+ E MP
Sbjct: 517 KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP 553
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 180/396 (45%), Gaps = 37/396 (9%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSL--YSKCGRFGYARKLVDQ 109
+ LLS K L ++ A +I G DP + L++ S+ Y+ K++ +
Sbjct: 53 HNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKIL-K 111
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV---KCNEFTFPSVLKACSIKKD 166
E + SW+ I G+ ++ KE+ L + M G + + FT+P + K C+ +
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
++G + G + + V N + M+A CG + ++RK+F +VSWN L +
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
Y + +A+ ++K M G++P++ ++ ++++C+ L + +
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 287 QFSANALVDMYSKGGRIENAVAV-------------------------------FEEITH 315
NAL+DM+SK G I A + F+++
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
Query: 316 PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQL 375
D+V WNA+I G VQ + ALAL EM++S P+ T+ L AC+ +G D+G +
Sbjct: 352 KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWI 411
Query: 376 HSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
H + K + + L+DMY+KC +S+A V+
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVF 447
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 130/270 (48%), Gaps = 8/270 (2%)
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYA--KCGQLGDSRKLFGSIV 213
S+L+ C + L +++ ++ G D F ++ L+ A + L S K+ I
Sbjct: 58 SLLEKCKLLLHL---KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIE 114
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI---RPNEFSLSIILNACAGLRNGSX 270
P++ SWN + +S+ E+ L+K+M+R G RP+ F+ ++ CA LR S
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 271 XXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQ 330
NA + M++ G +ENA VF+E D+VSWN +I G +
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 331 HECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFV 390
+ A+ + M+S G P+ T+ + +C+ +G + G++ + + + +
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 391 AVGLIDMYSKCEMLSDARRVYELMPKKDII 420
L+DM+SKC + +ARR+++ + K+ I+
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
Query: 44 SFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
S TKP I+ + LS C +L +G+ +H ++ ++ S + + LV +Y+KCG
Sbjct: 383 SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A V +T ++++A+I G +G A+ FN+M G+ +E TF +L AC
Sbjct: 443 ALS-VFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACC 501
Query: 163 IKKDLNMGRKVHG-MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSW 220
+ GR M + + +V + + G L ++ +L S+ + W
Sbjct: 502 HGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVW 561
Query: 221 NA-LFSCYVQSD 231
A LF C + +
Sbjct: 562 GALLFGCRMHGN 573
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 181/372 (48%), Gaps = 14/372 (3%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFS-HDPSFRNHL----VSLYSKCGRFGYARKLVD 108
NLL Q S+T ++HA IR G S D HL VSL S YA K+
Sbjct: 20 NLL-QTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPP-MSYAHKVFS 77
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKACSIKKDL 167
+ + V W+ LI GY + G A + +M + G V+ + T+P ++KA + D+
Sbjct: 78 KIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADV 137
Query: 168 NMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
+G +H + + +GF S +V N+L+ +YA CG + + K+F + +V+WN++ + +
Sbjct: 138 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 197
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
++ EA+ L+ EM GI+P+ F++ +L+ACA + + +
Sbjct: 198 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 257
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
S+N L+D+Y++ GR+E A +F+E+ + VSW ++I G + A+ L M+S+
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 317
Query: 348 -GACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEM 403
G P T L AC+ G G + + KI+ + F ++D+ ++
Sbjct: 318 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC--MVDLLARAGQ 375
Query: 404 LSDARRVYELMP 415
+ A + MP
Sbjct: 376 VKKAYEYIKSMP 387
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 149/292 (51%), Gaps = 8/292 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y L+ + LG +H+ +IR GF +N L+ LY+ CG A K+ D+
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
E D+V +W+++I+G+ +NG +EAL + +M G+K + FT S+L AC+ L +G
Sbjct: 183 PEKDLV-AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
++VH + G + +N L+ +YA+CG++ +++ LF +V + VSW +L +
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 231 DFCVEAVDLFKEMVRG-GIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXXXXD 286
F EA++LFK M G+ P E + IL AC+ ++ G +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWA 337
F +VD+ ++ G+++ A + + P++V W ++ C H +D A
Sbjct: 362 HF--GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 125/254 (49%), Gaps = 6/254 (2%)
Query: 171 RKVHGMSVVTGFD-SDGFVANTLV---VMYAKCGQLGDSRKLFGSIVAP-SVVSWNALFS 225
R++H S+ G SD + L+ V + + K+F I P +V WN L
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 226 CYVQSDFCVEAVDLFKEM-VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
Y + + A L++EM V G + P+ + ++ A + +
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+ N+L+ +Y+ G + +A VF+++ D+V+WN+VI G ++ + ALAL EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEML 404
S G P+ FTI S L ACA +G LG+++H +IK+ + + L+D+Y++C +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 405 SDARRVYELMPKKD 418
+A+ +++ M K+
Sbjct: 274 EEAKTLFDEMVDKN 287
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 3/366 (0%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV 115
+ CV L G+ +H ++ G D LV +Y++ G A+K+ D+ +
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
V+ W L+ GY++ E F M G+ + T ++KAC +G+ VHG
Sbjct: 176 VL-WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHG 234
Query: 176 MSVVTGF-DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV 234
+S+ F D ++ +++ MY KC L ++RKLF + V +VV W L S + + + V
Sbjct: 235 VSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAV 294
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
EA DLF++M+R I PN+ +L+ IL +C+ L + D + + +
Sbjct: 295 EAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFI 354
Query: 295 DMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVF 354
DMY++ G I+ A VF+ + +++SW+++I + + AL ++MKS PN
Sbjct: 355 DMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSV 414
Query: 355 TISSALKACAAVG-FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYEL 413
T S L AC+ G K+ +Q S + ++D+ + + +A+ +
Sbjct: 415 TFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDN 474
Query: 414 MPKKDI 419
MP K +
Sbjct: 475 MPVKPM 480
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 171/370 (46%), Gaps = 4/370 (1%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ-STET 113
LL+ +K+L ++HA +I GF + + L + Y + R +A ++
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 114 DVVVSWSALISGYVQNGF--GKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
SW+ ++SGY ++ + LL +N M + F +KAC L G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
+HG+++ G D D +VA +LV MYA+ G + ++K+F I + V W L Y++
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX-XXXXXXXXXXXXXDQFSA 290
E LF M G+ + +L ++ AC + G +
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
+++DMY K ++NA +FE ++V W +I+G + E A L +M
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL 309
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
PN T+++ L +C+++G G+ +H +I+ + D IDMY++C + AR V
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 411 YELMPKKDII 420
+++MP++++I
Sbjct: 370 FDMMPERNVI 379
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 8/276 (2%)
Query: 67 LGMELHAHLIRFGFSHDPSF-RNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISG 125
+G +H IR F + + ++ +Y KC ARKL + S + +VV+ W+ LISG
Sbjct: 228 VGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVM-WTTLISG 286
Query: 126 YVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSD 185
+ + EA F M + N+ T ++L +CS L G+ VHG + G + D
Sbjct: 287 FAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMD 346
Query: 186 GFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR 245
+ + MYA+CG + +R +F + +V+SW+++ + + + EA+D F +M
Sbjct: 347 AVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKS 406
Query: 246 GGIRPNEFSLSIILNACA---GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
+ PN + +L+AC+ ++ G + ++ +VD+ + G
Sbjct: 407 QNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYA--CMVDLLGRAGE 464
Query: 303 IENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDWA 337
I A + + + P +W A+++ C H+ D A
Sbjct: 465 IGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLA 500
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 5/270 (1%)
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV-- 213
++L S K LN ++VH ++ GF+ + + ++L Y + +L + F I
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 214 APSVVSWNALFSCYVQSDFCV--EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXX 271
+ SWN + S Y +S C + + L+ M R + F+L + AC GL
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH 331
D + A +LV+MY++ G +E+A VF+EI + V W ++ G +++
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID-TDSDFFV 390
+ L M+ +G + T+ +KAC V +G+ +H I+ D ++
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 391 AVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+IDMY KC +L +AR+++E ++++
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVV 278
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 166/349 (47%), Gaps = 20/349 (5%)
Query: 84 PSFRNHLV-SLYSKCGRFGYARKL---VDQSTETD---VVVSWSALISGYVQNGFGKEAL 136
P RN L+ +L S C R++ + +S D + W+ ++ Y+++ +A+
Sbjct: 43 PQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAI 102
Query: 137 LAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMY 196
+ M V + ++ P V+KA D +G+++H ++V GF D F + + +Y
Sbjct: 103 QVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLY 162
Query: 197 AKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
K G+ ++RK+F + SWNA+ + EAV++F +M R G+ P++F++
Sbjct: 163 CKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMV 222
Query: 257 IILNACAGLRNGSXXXXXXX--XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT 314
+ +C GL + S D N+L+DMY K GR++ A +FEE+
Sbjct: 223 SVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMR 282
Query: 315 HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQ 374
++VSW+++I G + AL +M+ G PN T L AC G + G+
Sbjct: 283 QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKT 342
Query: 375 LHSCLIKIDTDSDFFVAVGL------IDMYSKCEMLSDARRVYELMPKK 417
+ + S+F + GL +D+ S+ L +A++V E MP K
Sbjct: 343 YFAMM-----KSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMK 386
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 151/300 (50%), Gaps = 12/300 (4%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
++ V TLG ELH+ +R GF D + ++LY K G F ARK+ D++ E
Sbjct: 123 VIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERK 182
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
+ SW+A+I G G EA+ F DM G++ ++FT SV +C DL++ ++H
Sbjct: 183 -LGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLH 241
Query: 175 G--MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDF 232
+ T SD + N+L+ MY KCG++ + +F + +VVSW+++ Y +
Sbjct: 242 KCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGN 301
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQFS 289
+EA++ F++M G+RPN+ + +L+AC GL G +
Sbjct: 302 TLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHY- 360
Query: 290 ANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH---ECNDWALALLNEMK 345
+VD+ S+ G+++ A V EE+ P+++ W ++ GC + E +W + E++
Sbjct: 361 -GCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELE 419
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 192 LVVMYAKCGQLGDSRKLFGSIVA-------PSVVSWNALFSCYVQSDFCVEAVDLFKEMV 244
L + + C L R++ G I P WN + Y++ + ++A+ ++ MV
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 245 RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
R + P+ +SL I++ A + + + D+F + + +Y K G E
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFE 169
Query: 305 NAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACA 364
NA VF+E + SWNA+I G + A+ + +MK SG P+ FT+ S +C
Sbjct: 170 NARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCG 229
Query: 365 AVGFKDLGRQLHSCLIKIDTD--SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+G L QLH C+++ T+ SD + LIDMY KC + A ++E M +++++
Sbjct: 230 GLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVV 287
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 153/321 (47%), Gaps = 6/321 (1%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSL--YSKCGRFGYARKLVDQSTE 112
+L C + K L ++H+H+I G H PS NHL+ S G +A+ L D
Sbjct: 11 MLQGCNSMKKLR---KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV-KCNEFTFPSVLKACSIKKDLNMGR 171
W+ LI G+ + ++L +N M + V + + FTF LK+C K +
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
++HG + +GF D VA +LV Y+ G + + K+F + +VSWN + C+
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
+A+ ++K M G+ + ++L +L++CA + + F +N
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSN 247
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
AL+DMY+K G +ENA+ VF + D+++WN++I G H A++ +M +SG P
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 307
Query: 352 NVFTISSALKACAAVGFKDLG 372
N T L C+ G G
Sbjct: 308 NAITFLGLLLGCSHQGLVKEG 328
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 160/348 (45%), Gaps = 11/348 (3%)
Query: 38 NSQCFQSFTKPPISYTNL-LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSK 96
N S ++P + N L C KS+ +E+H +IR GF D LV YS
Sbjct: 95 NRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSA 154
Query: 97 CGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPS 156
G A K+ D+ D+V SW+ +I + G +AL + M GV + +T +
Sbjct: 155 NGSVEIASKVFDEMPVRDLV-SWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVA 213
Query: 157 VLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPS 216
+L +C+ LNMG +H ++ +S FV+N L+ MYAKCG L ++ +F +
Sbjct: 214 LLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRD 273
Query: 217 VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GL-RNGSXXXX 273
V++WN++ Y VEA+ F++MV G+RPN + +L C+ GL + G
Sbjct: 274 VLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFE 333
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVA-VFEEITHPDIVSWNAVIAGCVQH- 331
+ +VD+Y + G++EN++ ++ H D V W ++ C H
Sbjct: 334 IMSSQFHLTPNVKHY--GCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHR 391
Query: 332 --ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHS 377
E + A+ L ++++ A V S A A F + + + S
Sbjct: 392 NLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRS 439
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 9/269 (3%)
Query: 157 VLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAK--CGQLGDSRKLFGSIVA 214
+L+ C+ K L RK+H ++ G + N L+ A G L ++ LF +
Sbjct: 11 MLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 215 -PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI-RPNEFSLSIILNACAGLRNGSXXX 272
PS WN L + S + ++ + M+ + RP+ F+ + L +C +++
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 273 XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQH- 331
D A +LV YS G +E A VF+E+ D+VSWN +I C H
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMIC-CFSHV 186
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVA 391
++ AL++ M + G C + +T+ + L +CA V ++G LH I +S FV+
Sbjct: 187 GLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVS 246
Query: 392 VGLIDMYSKCEMLSDARRVYELMPKKDII 420
LIDMY+KC L +A V+ M K+D++
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGMRKRDVL 275
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 172/354 (48%), Gaps = 7/354 (1%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
+LH+ + + + DP F L Y+ ARKL D E V + W+++I Y +
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFL-WNSIIRAYAKA 84
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
L F+ + + + FT+ + + S D R +HG+++V+G D
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIR 249
+ +V Y+K G + ++ KLF SI P + WN + Y F + ++LF M G +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 250 PNEFSLSIILNACAGLRNGSXXXXXXXXXX---XXXXXXDQFSANALVDMYSKGGRIENA 306
PN +++ + +GL + S + ALV+MYS+ I +A
Sbjct: 205 PNCYTMVALT---SGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASA 261
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
+VF I+ PD+V+ +++I G + + AL L E++ SG P+ ++ L +CA +
Sbjct: 262 CSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAEL 321
Query: 367 GFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
G+++HS +I++ + D V LIDMYSKC +L A ++ +P+K+I+
Sbjct: 322 SDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIV 375
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 169/373 (45%), Gaps = 14/373 (3%)
Query: 39 SQCFQSFTKPPISYTNLLSQCVA---SKSL-TLGME-LHAHLIRFGFSHDPSFRNHLVSL 93
SQ +S T+P N C+A S+S T G+ +H I G D + +V
Sbjct: 95 SQILRSDTRP----DNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKA 150
Query: 94 YSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFT 153
YSK G A KL + D+ + W+ +I GY GF + + FN M G + N +T
Sbjct: 151 YSKAGLIVEASKLFCSIPDPDLAL-WNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYT 209
Query: 154 FPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV 213
++ L + VH + DS +V LV MY++C + + +F SI
Sbjct: 210 MVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS 269
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXX 273
P +V+ ++L + Y + EA+ LF E+ G +P+ ++I+L +CA L +
Sbjct: 270 EPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKE 329
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHEC 333
D +AL+DMYSK G ++ A+++F I +IVS+N++I G H
Sbjct: 330 VHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGF 389
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFV 390
A E+ G P+ T S+ L C G + G+++ + I+ ++ +V
Sbjct: 390 ASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYV 449
Query: 391 -AVGLIDMYSKCE 402
V L+ M K E
Sbjct: 450 YMVKLMGMAGKLE 462
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 9/262 (3%)
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
I+ LN +K+H + D + A L YA L +RKLF SV WN+
Sbjct: 18 IQTRLNT-QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNS 76
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
+ Y ++ + LF +++R RP+ F+ + + + +
Sbjct: 77 IIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSG 136
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA--GCVQHECNDW--AL 338
DQ +A+V YSK G I A +F I PD+ WN +I GC C W +
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGC----CGFWDKGI 192
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMY 398
L N M+ G PN +T+ + + +H+ +KI+ DS +V L++MY
Sbjct: 193 NLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMY 252
Query: 399 SKCEMLSDARRVYELMPKKDII 420
S+C ++ A V+ + + D++
Sbjct: 253 SRCMCIASACSVFNSISEPDLV 274
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 134/306 (43%), Gaps = 9/306 (2%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P YT L S + L + +HA ++ LV++YS+C A +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
+ +E D+V S+LI+GY + G KEAL F ++ M G K + VL +C+ D
Sbjct: 265 FNSISEPDLVAC-SSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
G++VH + G + D V + L+ MY+KCG L + LF I ++VS+N+L
Sbjct: 324 SVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRN-GSXXXXXXXXXXXXXX 283
F A + F E++ G+ P+E + S +L C +GL N G
Sbjct: 384 LGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEP 443
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVFEEITHP-DIVSWNAVIAGCVQHECNDWALALLN 342
+ + +V + G++E A + P D A+++ C HE A +
Sbjct: 444 QTEHYV--YMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAE 501
Query: 343 EMKSSG 348
+ +G
Sbjct: 502 NIHKNG 507
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 154/323 (47%), Gaps = 34/323 (10%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
+++ ++K ARK D+ E VV SW+A++SGY QNGF ++AL FNDM LGV+
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVV-SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRP 262
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC---------- 199
NE T+ V+ ACS + D ++ R + + + FV L+ M+AKC
Sbjct: 263 NETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIF 322
Query: 200 ----------------------GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAV 237
G + +R+LF ++ +VVSWN+L + Y + A+
Sbjct: 323 NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAI 382
Query: 238 DLFKEMV-RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
+ F++M+ G +P+E ++ +L+AC + + + +L+ M
Sbjct: 383 EFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFM 442
Query: 297 YSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTI 356
Y++GG + A VF+E+ D+VS+N + + L LL++MK G P+ T
Sbjct: 443 YARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTY 502
Query: 357 SSALKACAAVGFKDLGRQLHSCL 379
+S L AC G G+++ +
Sbjct: 503 TSVLTACNRAGLLKEGQRIFKSI 525
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 171/391 (43%), Gaps = 81/391 (20%)
Query: 67 LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
G+ A + + GF DP RN ++ +Y K ARK+ DQ ++ W+ +ISGY
Sbjct: 119 FGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGS-DWNVMISGY 177
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
+ G +EA F+ M V V ++TGF
Sbjct: 178 WKWGNKEEACKLFDMMPENDV-------------------------VSWTVMITGF---- 208
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
AK L ++RK F + SVVSWNA+ S Y Q+ F +A+ LF +M+R
Sbjct: 209 ----------AKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL 258
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
G+RPNE + I+++AC+ + S + F AL+DM++K I++A
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 307 VAVFEEI------------------------------THP--DIVSWNAVIAGCVQHECN 334
+F E+ T P ++VSWN++IAG +
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQA 378
Query: 335 DWALALLNEMKSSG-ACPNVFTISSALKACAAVGFKDLGR----QLHSCLIKIDTDSDFF 389
A+ +M G + P+ T+ S L AC + +LG + IK++ DS +
Sbjct: 379 ALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLN-DSGY- 436
Query: 390 VAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
LI MY++ L +A+RV++ M ++D++
Sbjct: 437 --RSLIFMYARGGNLWEAKRVFDEMKERDVV 465
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 4/181 (2%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG- 146
N ++S Y++ G AR+L D + +VV SW++LI+GY NG A+ F DM G
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKRNVV-SWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
K +E T SVL AC DL +G + + +L+ MYA+ G L +++
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAK 453
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AG 264
++F + VVS+N LF+ + + VE ++L +M GI P+ + + +L AC AG
Sbjct: 454 RVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAG 513
Query: 265 L 265
L
Sbjct: 514 L 514
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 46 TKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
+KP ++ ++LS C L LG + ++ + + S L+ +Y++ G A+
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAK 453
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
++ D+ E DVV S++ L + + NG G E L + M G++ + T+ SVL AC+
Sbjct: 454 RVFDEMKERDVV-SYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRA 512
Query: 165 KDLNMGRKV 173
L G+++
Sbjct: 513 GLLKEGQRI 521
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 171/402 (42%), Gaps = 49/402 (12%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVS--LYSKCGRF-GYARKLVDQSTE 112
L +C + L ++HA +++ G D +S + S F YA+ + D
Sbjct: 21 LQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK 172
D + W+ +I G+ + + +LL + M N +TFPS+LKACS +
Sbjct: 78 PDTFL-WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA---------- 222
+H G+++D + N+L+ YA G + LF I P VSWN+
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 223 ---------------------LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA 261
+ S YVQ+D EA+ LF EM + P+ SL+ L+A
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 262 CAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSW 321
CA L D L+DMY+K G +E A+ VF+ I + +W
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAW 316
Query: 322 NAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
A+I+G H A++ EM+ G PNV T ++ L AC+ G + G+ LI
Sbjct: 317 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK-----LIF 371
Query: 382 IDTDSDFFVAVG------LIDMYSKCEMLSDARRVYELMPKK 417
+ D+ + ++D+ + +L +A+R + MP K
Sbjct: 372 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK 413
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 139/316 (43%), Gaps = 36/316 (11%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++ +LL C + ++HA + + G+ +D N L++ Y+ G F A L D+
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 111 TETDVV------------------------------VSWSALISGYVQNGFGKEALLAFN 140
E D V +SW+ +ISGYVQ KEAL F+
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 141 DMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCG 200
+M V+ + + + L AC+ L G+ +H T D + L+ MYAKCG
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 201 QLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
++ ++ ++F +I SV +W AL S Y EA+ F EM + GI+PN + + +L
Sbjct: 297 EMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT 356
Query: 261 ACA--GL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HP 316
AC+ GL G + + +VD+ + G ++ A +E+ P
Sbjct: 357 ACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG--CIVDLLGRAGLLDEAKRFIQEMPLKP 414
Query: 317 DIVSWNAVIAGCVQHE 332
+ V W A++ C H+
Sbjct: 415 NAVIWGALLKACRIHK 430
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 135/311 (43%), Gaps = 37/311 (11%)
Query: 143 CMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLV---VMYAKC 199
C ++ N + S L+ CS +++L +++H + TG D + + +
Sbjct: 6 CSFSLEHNLYETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSS 62
Query: 200 GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
L ++ +F P WN + + SD ++ L++ M+ N ++ +L
Sbjct: 63 DFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIV 319
AC+ L D ++ N+L++ Y+ G + A +F+ I PD V
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 320 SWNAVI-------------------------------AGCVQHECNDWALALLNEMKSSG 348
SWN+VI +G VQ + N AL L +EM++S
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
P+ ++++AL ACA +G + G+ +HS L K D + LIDMY+KC + +A
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 409 RVYELMPKKDI 419
V++ + KK +
Sbjct: 303 EVFKNIKKKSV 313
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 168/363 (46%), Gaps = 36/363 (9%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG- 146
N L+S Y K G F LV S + VVS++ALISG+ + EAL F M G
Sbjct: 118 NALISTYLKLG-FPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGL 176
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAK--CGQLGD 204
V+ NE+TF ++L AC ++G ++HG+ V +GF + FV+N+L+ +Y K D
Sbjct: 177 VQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDD 236
Query: 205 SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR-GGIRPNEFSLSIILNACA 263
KLF I V SWN + S V+ +A DLF EM R G + F+LS +L++C
Sbjct: 237 VLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296
Query: 264 -------------------------------GLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
G + D +
Sbjct: 297 DSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTE 356
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
++ Y G +++AV +F +T + +++NA++AG ++ AL L +M G
Sbjct: 357 MITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELT 416
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
F+++SA+ AC V K + Q+H IK T + + L+DM ++CE ++DA +++
Sbjct: 417 DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD 476
Query: 413 LMP 415
P
Sbjct: 477 QWP 479
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 150/353 (42%), Gaps = 33/353 (9%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ F + + LLS C S L G ELH IR G + S N L+ YSK
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK 338
Query: 103 ARKLVDQSTETDVV------------------------------VSWSALISGYVQNGFG 132
L + D V ++++AL++G+ +NG G
Sbjct: 339 VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHG 398
Query: 133 KEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTL 192
+AL F DM GV+ +F+ S + AC + + + ++HG + G + + L
Sbjct: 399 LKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTAL 458
Query: 193 VVMYAKCGQLGDSRKLFGSIVA--PSVVSWNALFSCYVQSDFCVEAVDLF-KEMVRGGIR 249
+ M +C ++ D+ ++F + S + ++ Y ++ +AV LF + + +
Sbjct: 459 LDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLF 518
Query: 250 PNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAV 309
+E SL++IL C L D N+L+ MY+K ++A+ +
Sbjct: 519 LDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKI 578
Query: 310 FEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
F + D++SWN++I+ + D ALAL + M P++ T++ + A
Sbjct: 579 FNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISA 631
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 187/410 (45%), Gaps = 44/410 (10%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSK-----CGRFGYARK 105
++ +L+ CV +LG+++H +++ GF + N L+SLY K C K
Sbjct: 183 TFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDD---VLK 239
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCML-GVKCNEFTFPSVLKACSIK 164
L D+ + DV SW+ ++S V+ G +A F +M + G + FT ++L +C+
Sbjct: 240 LFDEIPQRDVA-SWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAK-------------------------- 198
L GR++HG ++ G + V N L+ Y+K
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 199 -----CGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
G + + ++F ++ + +++NAL + + ++ ++A+ LF +M++ G+ +F
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
SL+ ++AC + + AL+DM ++ R+ +A +F++
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQW 478
Query: 314 TH--PDIVSWNAVIAGCVQHECNDWALALLNE-MKSSGACPNVFTISSALKACAAVGFKD 370
+ ++I G ++ D A++L + + + +++ L C +GF++
Sbjct: 479 PSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFRE 538
Query: 371 LGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+G Q+H +K SD + LI MY+KC DA +++ M + D+I
Sbjct: 539 MGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVI 588
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 30 DSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNH 89
D ++ + C Q +S T +L+ C +G ++H + ++ G+ D S N
Sbjct: 502 DKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNS 561
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
L+S+Y+KC A K+ + E D V+SW++LIS Y+ G EAL ++ M +K
Sbjct: 562 LISMYAKCCDSDDAIKIFNTMREHD-VISWNSLISCYILQRNGDEALALWSRMNEKEIKP 620
Query: 150 NEFTFPSVLKA 160
+ T V+ A
Sbjct: 621 DIITLTLVISA 631
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 156/332 (46%), Gaps = 41/332 (12%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VK 148
+V Y K GR AR L D+ TE +V+ +W+A+I GY + GF ++ F M G VK
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTERNVI-TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVK 272
Query: 149 CNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKL 208
N T + KAC G ++HG+ + D F+ N+L+ MY+K G +G+++ +
Sbjct: 273 VNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAV 332
Query: 209 FGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNG 268
FG + VSWN+L + VQ EA +LF++M P +
Sbjct: 333 FGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM------PGK---------------- 370
Query: 269 SXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGC 328
D S ++ +S G I V +F + D ++W A+I+
Sbjct: 371 -----------------DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 329 VQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDF 388
V + + AL ++M CPN +T SS L A A++ G Q+H ++K++ +D
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDL 473
Query: 389 FVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
V L+ MY KC +DA +++ + + +I+
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKIFSCISEPNIV 505
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 142/314 (45%), Gaps = 14/314 (4%)
Query: 47 KPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
K +S+ +L++ V K ++ EL + D ++ +S G +L
Sbjct: 339 KDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVEL 394
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
E D + +W+A+IS +V NG+ +EAL F+ M V N +TF SVL A + D
Sbjct: 395 FGMMPEKDNI-TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLAD 453
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
L G ++HG V +D V N+LV MY KCG D+ K+F I P++VS+N + S
Sbjct: 454 LIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG 513
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRN---GSXXXXXXXXXXXXXX 283
Y + F +A+ LF + G PN + +L+AC + G
Sbjct: 514 YSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEP 573
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH---ECNDWALA 339
D ++ +VD+ + G +++A + + P W ++++ H + + A
Sbjct: 574 GPDHYA--CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAK 631
Query: 340 LLNEMKSSGACPNV 353
L E++ A P V
Sbjct: 632 KLIELEPDSATPYV 645
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 9/230 (3%)
Query: 117 VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGM 176
VS++ +I+G+V+ G EA + + VK + +VL + L G+ +
Sbjct: 145 VSYATMITGFVRAGRFDEAEFLYAET---PVKFRDSVASNVL----LSGYLRAGKWNEAV 197
Query: 177 SVVTGFDSDGFVA-NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVE 235
V G V+ +++V Y K G++ D+R LF + +V++W A+ Y ++ F +
Sbjct: 198 RVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFED 257
Query: 236 AVDLFKEMVR-GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
LF M + G ++ N +L+++ AC D F N+L+
Sbjct: 258 GFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLM 317
Query: 295 DMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
MYSK G + A AVF + + D VSWN++I G VQ + A L +M
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 138/334 (41%), Gaps = 50/334 (14%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N +S +++ G A + Q + +V SW A+IS Y +NG +A F++M
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIV-SWIAMISAYAENGKMSKAWQVFDEM----- 107
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+ V T ++ A ++ KC LG + +
Sbjct: 108 ---------------------------PVRVTTSYN-----AMITAMIKNKC-DLGKAYE 134
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG--L 265
LF I + VS+ + + +V++ EA L+ E P +F S+ N L
Sbjct: 135 LFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAET------PVKFRDSVASNVLLSGYL 188
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
R G + S +++V Y K GRI +A ++F+ +T ++++W A+I
Sbjct: 189 RAGKWNEAVRVFQGMAVK--EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMI 246
Query: 326 AGCVQHECNDWALALLNEMKSSGACP-NVFTISSALKACAAVGFKDLGRQLHSCLIKIDT 384
G + + L M+ G N T++ KAC G Q+H + ++
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPL 306
Query: 385 DSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
+ D F+ L+ MYSK + +A+ V+ +M KD
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 185/401 (46%), Gaps = 37/401 (9%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCG------------- 98
++ L+++ + SKS TL +HA L+ GF + N + LY K G
Sbjct: 7 FSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIP 66
Query: 99 ---------------RFGY---ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFN 140
+ GY A L D+ E DVV SW+ +ISG V GF + + F
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVV-SWNTMISGLVSCGFHEYGIRVFF 125
Query: 141 DMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA-NTLVVMYAKC 199
DM ++ EFTF S+L S+ + G ++HG ++ +G V N+++ MY +
Sbjct: 126 DMQRWEIRPTEFTF-SIL--ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRL 182
Query: 200 GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
G + +F ++ VVSWN L S A+D F M I+P+E+++S+++
Sbjct: 183 GVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVV 242
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIV 319
+ C+ LR S + A +DM+SK R++++V +F E+ D V
Sbjct: 243 SICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSV 302
Query: 320 SWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL 379
N++I H C + AL L + P+ FT SS L + AV D G +HS +
Sbjct: 303 LCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVML-DHGADVHSLV 361
Query: 380 IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
IK+ D D VA L++MY K + A V+ KD+I
Sbjct: 362 IKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLI 402
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 175/355 (49%), Gaps = 13/355 (3%)
Query: 68 GMELHAHLIRFGFS-HDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
G ++H + I G S ++ N ++ +Y + G F YA + + DVV SW+ LI
Sbjct: 152 GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVV-SWNCLILSC 210
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
+G + AL F M + ++ +E+T V+ CS ++L+ G++ + + GF S+
Sbjct: 211 SDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNS 270
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
V + M++KC +L DS KLF + V N++ Y +A+ LF +
Sbjct: 271 IVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQ 330
Query: 247 GIRPNEFSLSIILNACAG--LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
+RP++F+ S +L++ L +G+ D A +L++MY K G ++
Sbjct: 331 SVRPDKFTFSSVLSSMNAVMLDHGA---DVHSLVIKLGFDLDTAVATSLMEMYFKTGSVD 387
Query: 305 NAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC-PNVFTISSALKAC 363
A+ VF + D++ WN VI G ++ +LA+ N++ + + P+ T+ L AC
Sbjct: 388 LAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVAC 447
Query: 364 AAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
GF + G Q+ S + K ++ ++ + + I++ + M+++A+ + + +P
Sbjct: 448 CYAGFVNEGIQIFSSMEKAHGVNPGNEHYACI--IELLCRVGMINEAKDIADKIP 500
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 7/224 (3%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P YT ++S C + L+ G + A I+ GF + + ++SKC R + KL
Sbjct: 233 PDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKL 292
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
+ + D V+ +++I Y + G++AL F V+ ++FTF SVL + +
Sbjct: 293 FRELEKWDSVLC-NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM- 350
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
L+ G VH + + GFD D VA +L+ MY K G + + +F ++ WN +
Sbjct: 351 LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMG 410
Query: 227 YVQSDFCVEAVDLFKEMVRG-GIRPNEFSLSIILNAC--AGLRN 267
++ VE++ +F +++ ++P+ +L IL AC AG N
Sbjct: 411 LARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVN 454
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 157/344 (45%), Gaps = 13/344 (3%)
Query: 77 RFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEAL 136
R GF D LV Y + G A KL D+ E D+V SW++LISGY G+ +
Sbjct: 64 RHGFIGD-----QLVGCYLRLGHDVCAEKLFDEMPERDLV-SWNSLISGYSGRGYLGKCF 117
Query: 137 LAFNDMCM--LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVV 194
+ M + +G + NE TF S++ AC GR +HG+ + G + V N +
Sbjct: 118 EVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFIN 177
Query: 195 MYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFS 254
Y K G L S KLF + ++VSWN + ++Q+ + + F R G P++ +
Sbjct: 178 WYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQAT 237
Query: 255 LSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT 314
+L +C + ++ AL+D+YSK GR+E++ VF EIT
Sbjct: 238 FLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT 297
Query: 315 HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQ 374
PD ++W A++A H A+ M G P+ T + L AC+ G + G+
Sbjct: 298 SPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKH 357
Query: 375 LHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+ K ID D + ++D+ + +L DA + + MP
Sbjct: 358 YFETMSKRYRIDPRLDHYSC--MVDLLGRSGLLQDAYGLIKEMP 399
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 143/288 (49%), Gaps = 7/288 (2%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F +++ +++S CV S G +H +++FG + N ++ Y K G +
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSC 189
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
KL + + ++V SW+ +I ++QNG ++ L FN +G + ++ TF +VL++C
Sbjct: 190 KLFEDLSIKNLV-SWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDM 248
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
+ + + +HG+ + GF + + L+ +Y+K G+L DS +F I +P ++W A+
Sbjct: 249 GVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAML 308
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXX 281
+ Y F +A+ F+ MV GI P+ + + +LNAC +GL G
Sbjct: 309 AAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRI 368
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGC 328
D +S +VD+ + G +++A + +E+ P W A++ C
Sbjct: 369 DPRLDHYS--CMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC 414
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 2/235 (0%)
Query: 186 GFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV- 244
GF+ + LV Y + G + KLF + +VSWN+L S Y + + ++ M+
Sbjct: 66 GFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMI 125
Query: 245 -RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI 303
G RPNE + +++AC + + NA ++ Y K G +
Sbjct: 126 SEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDL 185
Query: 304 ENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
++ +FE+++ ++VSWN +I +Q+ + LA N + G P+ T + L++C
Sbjct: 186 TSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSC 245
Query: 364 AAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
+G L + +H ++ + + L+D+YSK L D+ V+ + D
Sbjct: 246 EDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPD 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
F + LV Y + G A +F+E+ D+VSWN++I+G +L+ M S
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 348 --GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLS 405
G PN T S + AC G K+ GR +H ++K + V I+ Y K L+
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 406 DARRVYELMPKKDII 420
+ +++E + K+++
Sbjct: 187 SSCKLFEDLSIKNLV 201
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 168/364 (46%), Gaps = 23/364 (6%)
Query: 70 ELHAHLIRFGFSHDPS---FRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
+LHA +R + +P+ ++ L S YA ++ D S E W+ LI
Sbjct: 66 QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD-SIENHSSFMWNTLIRAC 124
Query: 127 VQNGFGKE-ALLAFNDMCMLGVKC-NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
+ KE A + + M G ++ TFP VLKAC+ + G++VH V GF
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV 244
D +V N L+ +Y CG L +RK+F + S+VSWN++ V+ A+ LF+EM
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 245 RGGIRPNEFSLSIILNACAGLRN---GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG 301
R P+ +++ +L+ACAGL + G+ D N+L++MY K G
Sbjct: 245 R-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 302 RIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM--KSSGACPNVFTISSA 359
+ A VF+ + D+ SWNA+I G H + A+ + M K PN T
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 360 LKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGL------IDMYSKCEMLSDARRVYEL 413
L AC GF + GRQ +++ D+ + L +D+ ++ +++A +
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVR-----DYCIEPALEHYGCIVDLIARAGYITEAIDMVMS 418
Query: 414 MPKK 417
MP K
Sbjct: 419 MPMK 422
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 13/289 (4%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++ +L C + G ++H +++ GF D N L+ LY CG ARK+ D+
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 212
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
E +VSW+++I V+ G AL F +M + + +T SVL AC+ L++G
Sbjct: 213 PERS-LVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLG 270
Query: 171 RKVHGMSVV---TGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
H + D V N+L+ MY KCG L + ++F + + SWNA+ +
Sbjct: 271 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF 330
Query: 228 VQSDFCVEAVDLFKEMV--RGGIRPNEFSLSIILNAC--AGLRN-GSXXXXXXXXXXXXX 282
EA++ F MV R +RPN + +L AC G N G
Sbjct: 331 ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIE 390
Query: 283 XXXDQFSANALVDMYSKGGRIENAV-AVFEEITHPDIVSWNAVIAGCVQ 330
+ + +VD+ ++ G I A+ V PD V W +++ C +
Sbjct: 391 PALEHY--GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 131/276 (47%), Gaps = 20/276 (7%)
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR-------KL 208
S+ + CS D++ +++H ++ T + + + +Y K QL S ++
Sbjct: 53 SLAETCS---DMSQLKQLHAFTLRTTYPEEP----ATLFLYGKILQLSSSFSDVNYAFRV 105
Query: 209 FGSIVAPSVVSWNALF-SCYVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSIILNACAGLR 266
F SI S WN L +C EA L+++M+ RG P++ + +L ACA +
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
S D + N L+ +Y G ++ A VF+E+ +VSWN++I
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 225
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---ID 383
V+ D AL L EM+ S P+ +T+ S L ACA +G LG H+ L++ +D
Sbjct: 226 ALVRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD 284
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
D V LI+MY KC L A +V++ M K+D+
Sbjct: 285 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDL 320
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 8/219 (3%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIR---FGFSHDPSFRNHLVSLYSKCGR 99
+SF + ++LS C SL+LG HA L+R + D +N L+ +Y KCG
Sbjct: 245 RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGS 304
Query: 100 FGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMC--MLGVKCNEFTFPSV 157
A ++ + D + SW+A+I G+ +G +EA+ F+ M V+ N TF +
Sbjct: 305 LRMAEQVFQGMQKRD-LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVV-MYAKCGQLGDSRKLFGSI-VAP 215
L AC+ + +N GR+ M V +V + A+ G + ++ + S+ + P
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 216 SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFS 254
V W +L + VE + + G NE S
Sbjct: 424 DAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESS 462
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECN--DWALALLNEMK 345
F ++ + S + A VF+ I + WN +I C H+ + + A L +M
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACA-HDVSRKEEAFMLYRKML 142
Query: 346 SSG-ACPNVFTISSALKACAAV-GFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEM 403
G + P+ T LKACA + GF + G+Q+H ++K D +V GLI +Y C
Sbjct: 143 ERGESSPDKHTFPFVLKACAYIFGFSE-GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGC 201
Query: 404 LSDARRVYELMPKKDII 420
L AR+V++ MP++ ++
Sbjct: 202 LDLARKVFDEMPERSLV 218
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 171/395 (43%), Gaps = 73/395 (18%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
LL C + G ++H +++R G + S N L+ +YS+ G+ +RK+ + + +
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 115 V----------------------------------VVSWSALISGYVQNGFGKEALLAFN 140
+ +V+W++L+SGY G K+A+
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 141 DMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCG 200
M + G+K + + S+L+A + L +G+ +HG + D +V TL+ MY K G
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 201 QLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
L +R +F + A ++V+WN+L S + +A L M + GI+P
Sbjct: 275 YLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP---------- 324
Query: 261 ACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF----EEITHP 316
D + N+L Y+ G+ E A+ V E+ P
Sbjct: 325 -------------------------DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLH 376
++VSW A+ +GC ++ AL + +M+ G PN T+S+ LK + G+++H
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 377 SCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
++ + D +VA L+DMY K L A ++
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF 454
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 169 MGRKVHGMSVVTGFD-SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
+G +HG + G D SD V + + Y +C LG + KLF + ++WN +
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
++S +AV+LF+EM G + + ++ +L C+ + +
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 288 FSANALVDMYSKGGRIE-------------------------------NAVAVFEEIT-- 314
N+L+ MYS+ G++E +A+ + +E+
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 315 --HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
PDIV+WN++++G + A+A+L M+ +G P+ +ISS L+A A G LG
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 373 RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ +H +++ D +V LIDMY K L AR V+++M K+I+
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIV 292
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 135/328 (41%), Gaps = 35/328 (10%)
Query: 47 KPPISYTNLLSQCVASKS-LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
KP S + L Q VA L LG +H +++R +D L+ +Y K G YAR
Sbjct: 222 KPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARM 281
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
+ D + +V+W++L+SG K+A M G+K + T+ S+ +
Sbjct: 282 VFDM-MDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA--- 337
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
+G+ + V+ G VAP+VVSW A+FS
Sbjct: 338 --TLGKPEKALDVIGKMKEKG--------------------------VAPNVVSWTAIFS 369
Query: 226 -CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
C +F A+ +F +M G+ PN ++S +L L
Sbjct: 370 GCSKNGNF-RNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
D + A ALVDMY K G +++A+ +F I + + SWN ++ G + +A + M
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM 488
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLG 372
+G P+ T +S L C G G
Sbjct: 489 LEAGMEPDAITFTSVLSVCKNSGLVQEG 516
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 18/290 (6%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+SY LL +++L + ME + G D N L S Y+ G+ A ++ +
Sbjct: 301 LSYACLLKD---AEALMIRME------KEGIKPDAITWNSLASGYATLGKPEKALDVIGK 351
Query: 110 STETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
E V VVSW+A+ SG +NG + AL F M GV N T ++LK
Sbjct: 352 MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSL 411
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
L+ G++VHG + D +VA LV MY K G L + ++F I S+ SWN +
Sbjct: 412 LHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMG 471
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXX 283
Y E + F M+ G+ P+ + + +L+ C +GL + G
Sbjct: 472 YAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIP 531
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHE 332
+ S +VD+ + G ++ A + ++ PD W A ++ C H
Sbjct: 532 TIEHCS--CMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHR 579
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 178/388 (45%), Gaps = 34/388 (8%)
Query: 59 CVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVS 118
CV + + LG LH+ I+FG D + L+S+Y KCG ARK+ D+ E +V +
Sbjct: 57 CVVPR-VVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVA-T 114
Query: 119 WSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK------ 172
W+A+I GY+ NG +A+LA + V N T+ ++K + ++ R+
Sbjct: 115 WNAMIGGYMSNG---DAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMP 171
Query: 173 -----VHGMSVVTGF------------------DSDGFVANTLVVMYAKCGQLGDSRKLF 209
V SV+ G + + FV + ++ Y + G + ++R +F
Sbjct: 172 FELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIF 231
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGS 269
+ A +V WN L + Y Q+ + +A+D F M G P+ ++S IL+ACA
Sbjct: 232 YRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLD 291
Query: 270 XXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCV 329
+QF +NAL+DMY+K G +ENA +VFE I+ + N++I+
Sbjct: 292 VGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLA 351
Query: 330 QHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFF 389
H AL + + M+S P+ T + L AC GF G ++ S + D +
Sbjct: 352 IHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVK 411
Query: 390 VAVGLIDMYSKCEMLSDARRVYELMPKK 417
LI + + L +A R+ + M K
Sbjct: 412 HFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 28/320 (8%)
Query: 120 SALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS-IKKDLNMGRKVHGMSV 178
S LI ++ G +AL+ + + GV + P +L+AC+ + + +G+ +H S+
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESI 73
Query: 179 VTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVD 238
G SD V ++L+ MY KCG + +RK+F + +V +WNA+ Y+ + V A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 239 LFKE------------MVRG-GIR-------------PNEFSLSIILNACAGLRNGSXXX 272
LF+E M++G G R P E + G+ +
Sbjct: 134 LFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKM 193
Query: 273 XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHE 332
+ F + ++ Y + G + A A+F + D+V WN +IAG Q+
Sbjct: 194 EDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNG 253
Query: 333 CNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV 392
+D A+ M+ G P+ T+SS L ACA G D+GR++HS + + + FV+
Sbjct: 254 YSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSN 313
Query: 393 GLIDMYSKCEMLSDARRVYE 412
LIDMY+KC L +A V+E
Sbjct: 314 ALIDMYAKCGDLENATSVFE 333
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 6/269 (2%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
++S Y + G AR + + D+V+ W+ LI+GY QNG+ +A+ AF +M G +
Sbjct: 214 MMSGYFRIGDVHEARAIFYRVFARDLVI-WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEP 272
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
+ T S+L AC+ L++GR+VH + G + + FV+N L+ MYAKCG L ++ +F
Sbjct: 273 DAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVF 332
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRN 267
SI SV N++ SC EA+++F M ++P+E + +L AC G
Sbjct: 333 ESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLM 392
Query: 268 GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIA 326
F L+ + + G+++ A + +E+ P+ A++
Sbjct: 393 EGLKIFSEMKTQDVKPNVKHF--GCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLG 450
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFT 355
C H + A ++ ++++G+ N ++
Sbjct: 451 ACKVHMDTEMAEQVMKIIETAGSITNSYS 479
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 46/278 (16%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
+ + ++ +++LS C S L +G E+H+ + G + N L+ +Y+KCG
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A V +S V +++IS +G GKEAL F+ M L +K +E TF +VL AC
Sbjct: 328 ATS-VFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC- 385
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVV 218
VHG GF +G K+F + V P+V
Sbjct: 386 ----------VHG-----GFLMEGL-------------------KIFSEMKTQDVKPNVK 411
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
+ L +S EA L KEM ++PN+ L +L AC +
Sbjct: 412 HFGCLIHLLGRSGKLKEAYRLVKEM---HVKPNDTVLGALLGACKVHMDTEMAEQVMKII 468
Query: 279 XXXXXXXDQFSANALV---DMYSKGGRIENAVAVFEEI 313
+ +S N L ++Y+ R + A A+ E+
Sbjct: 469 ETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEM 506
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 158/350 (45%), Gaps = 15/350 (4%)
Query: 33 TNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVS 92
T V +NS +++ + L ++HAHLI G+ S L++
Sbjct: 3 TKVAANSAAYEAIVRAGPRVKQL-------------QQVHAHLIVTGYGRSRSLLTKLIT 49
Query: 93 LYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEF 152
L Y L D + ++++I + + + M V + +
Sbjct: 50 LACSARAIAYTHLLFLSVPLPDDFL-FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNY 108
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
TF SV+K+C+ L +G+ VH +VV+GF D +V LV Y+KCG + +R++F +
Sbjct: 109 TFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRM 168
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX 272
S+V+WN+L S + Q+ EA+ +F +M G P+ + +L+ACA S
Sbjct: 169 PEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGS 228
Query: 273 XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHE 332
+ AL+++YS+ G + A VF+++ ++ +W A+I+ H
Sbjct: 229 WVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHG 288
Query: 333 CNDWALALLNEMKSS-GACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
A+ L N+M+ G PN T + L ACA G + GR ++ + K
Sbjct: 289 YGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK 338
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 126/273 (46%), Gaps = 3/273 (1%)
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
V N + ++++A K L ++VH +VTG+ + L+ + + +
Sbjct: 5 VAANSAAYEAIVRAGPRVKQL---QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTH 61
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR 266
LF S+ P +N++ + + V ++ M+ + P+ ++ + ++ +CA L
Sbjct: 62 LLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS 121
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
D + ALV YSK G +E A VF+ + IV+WN++++
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDS 386
G Q+ D A+ + +M+ SG P+ T S L ACA G LG +H +I D
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 387 DFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+ + LI++YS+C + AR V++ M + ++
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 19/227 (8%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F ++ +LLS C + +++LG +H ++I G + L++LYS+CG G AR
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDM---CMLGVKCNEFTFPSVLKAC 161
++ D+ ET+ V +W+A+IS Y +G+G++A+ FN M C G N TF +VL AC
Sbjct: 264 EVFDKMKETN-VAAWTAMISAYGTHGYGQQAVELFNKMEDDC--GPIPNNVTFVAVLSAC 320
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANT-LVVMYAKCGQLGDSRKLF------GSIVA 214
+ + GR V+ + G + +V M + G L ++ K G A
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 215 PSVVSWNALF-SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
P++ W A+ +C + ++ + V++ K ++ + P+ ++L+
Sbjct: 381 PAL--WTAMLGACKMHRNYDL-GVEIAKRLI--ALEPDNPGHHVMLS 422
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%)
Query: 309 VFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGF 368
+F + PD +N+VI + +A M SS P+ +T +S +K+CA +
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 369 KDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+G+ +H + D +V L+ YSKC + AR+V++ MP+K I+
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIV 174
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 145/278 (52%), Gaps = 8/278 (2%)
Query: 65 LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALIS 124
+ LG +H+ +IR GF +N L+ LY+ CG A K+ D+ E D+V +W+++I+
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV-AWNSVIN 62
Query: 125 GYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
G+ +NG +EAL + +M G+K + FT S+L AC+ L +G++VH + G
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV 244
+ +N L+ +YA+CG++ +++ LF +V + VSW +L + F EA++LFK M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 245 RG-GIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKG 300
G+ P E + IL AC+ ++ G + F +VD+ ++
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG--CMVDLLARA 240
Query: 301 GRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWA 337
G+++ A + + P++V W ++ C H +D A
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 127/254 (50%), Gaps = 6/254 (2%)
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFS 225
D+ +G +H + + +GF S +V N+L+ +YA CG + + K+F + +V+WN++ +
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX 285
+ ++ EA+ L+ EM GI+P+ F++ +L+ACA + +
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
+ S+N L+D+Y++ GR+E A +F+E+ + VSW ++I G + A+ L M+
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 346 SS-GACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKC 401
S+ G P T L AC+ G G + + KI+ + F ++D+ ++
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC--MVDLLARA 240
Query: 402 EMLSDARRVYELMP 415
+ A + MP
Sbjct: 241 GQVKKAYEYIKSMP 254
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 80/131 (61%)
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
+ N+L+ +Y+ G + +A VF+++ D+V+WN+VI G ++ + ALAL EM S
Sbjct: 24 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 83
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
G P+ FTI S L ACA +G LG+++H +IK+ + + L+D+Y++C + +A
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 408 RRVYELMPKKD 418
+ +++ M K+
Sbjct: 144 KTLFDEMVDKN 154
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 53 TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
+LLS C +LTLG +H ++I+ G + + N L+ LY++CGR A+ L D+ +
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDM-CMLGVKCNEFTFPSVLKACS----IKKDL 167
+ VSW++LI G NGFGKEA+ F M G+ E TF +L ACS +K+
Sbjct: 153 KN-SVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 168 NMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF- 224
R++ + + G + + L A+ GQ+ + + S+ + P+VV W L
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCMVDLL----ARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 267
Query: 225 SCYVQSD 231
+C V D
Sbjct: 268 ACTVHGD 274
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 175/395 (44%), Gaps = 14/395 (3%)
Query: 36 VSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYS 95
V N + F + +++ C + LT G LH + + G ++++Y+
Sbjct: 8 VQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYA 67
Query: 96 KCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VKCNEFTF 154
KC R +K+ Q D VV W+ +++G + G+E + F M K + TF
Sbjct: 68 KCRRMDDCQKMFRQMDSLDPVV-WNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTF 125
Query: 155 PSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQL-GDSRKLFGSIV 213
VL C D G+ +H + G + D V N LV MYAK G + D+ F I
Sbjct: 126 AIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIA 185
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNG----S 269
VVSWNA+ + + +++ +A F M++ PN +++ +L CA + S
Sbjct: 186 DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRS 245
Query: 270 XXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCV 329
F N+LV Y + GRIE A ++F + D+VSWN VIAG
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 330 QHECNDW--ALALLNEMKSSG-ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID-TD 385
+ C +W A L + + G P+ TI S L CA + G+++HS +++
Sbjct: 306 SN-C-EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLL 363
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
D V LI Y++ S A + LM KDII
Sbjct: 364 EDTSVGNALISFYARFGDTSAAYWAFSLMSTKDII 398
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 152/340 (44%), Gaps = 41/340 (12%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHD---PSFRNHLVSLYSKCGR 99
++ T ++ +LL C+ + + E+H + ++ G HD P N L+ Y+KCG
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN 485
Query: 100 FGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCML-------------- 145
YA K+ +E +VS+++L+SGYV +G +A + F +M
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAE 545
Query: 146 -----------------GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFV 188
G++ N T ++L C+ L++ R+ HG ++ G D +
Sbjct: 546 SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY-IIRGGLGDIRL 604
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI 248
TL+ +YAKCG L + +F S +V + A+ + Y EA+ ++ M I
Sbjct: 605 KGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNI 664
Query: 249 RPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
+P+ ++ +L AC AGL ++G +Q++ VD+ ++GGR+++
Sbjct: 665 KPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACA--VDLIARGGRLDD 722
Query: 306 AVAVFEEI-THPDIVSWNAVIAGCVQHECNDWALALLNEM 344
A + ++ P+ W ++ C + D ++ N +
Sbjct: 723 AYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHL 762
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 168/391 (42%), Gaps = 40/391 (10%)
Query: 68 GMELHAHLIRFGFSHDPSFR-NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
G ++H+++++ + F N LVS Y + GR A L + D+V SW+ +I+GY
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV-SWNVVIAGY 304
Query: 127 VQNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD-S 184
N +A F+++ G V + T S+L C+ DL G+++H + +
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV 244
D V N L+ YA+ G + F + ++SWNA+ + S + ++L ++
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLL 424
Query: 245 RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS---ANALVDMYSKGG 301
I + ++ +L C ++ D+ NAL+D Y+K G
Sbjct: 425 NEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCG 484
Query: 302 RIE--------------------------------NAVAVFEEITHPDIVSWNAVIAGCV 329
+E +A +F E++ D+ +W+ ++
Sbjct: 485 NVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYA 544
Query: 330 QHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFF 389
+ C + A+ + E+++ G PN TI + L CA + L RQ H +I+ D
Sbjct: 545 ESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIR 603
Query: 390 VAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ L+D+Y+KC L A V++ ++D++
Sbjct: 604 LKGTLLDVYAKCGSLKHAYSVFQSDARRDLV 634
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 175/406 (43%), Gaps = 45/406 (11%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFS-HDPSFRNHLVSLYSKCGRFGYARKLVD 108
++ ++L C L G E+H++++R + D S N L+S Y++ G A
Sbjct: 331 VTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFS 390
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+ D++ SW+A++ + + + L + + + + T S+LK C + +
Sbjct: 391 LMSTKDII-SWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIG 449
Query: 169 MGRKVHGMSVVTGF---DSDGFVANTLVVMYAKCGQLGDSRKLF-GSIVAPSVVSWNALF 224
++VHG SV G + + + N L+ YAKCG + + K+F G ++VS+N+L
Sbjct: 450 KVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLL 509
Query: 225 SCYVQS-----------------------------DFCV--EAVDLFKEMVRGGIRPNEF 253
S YV S + C EA+ +F+E+ G+RPN
Sbjct: 510 SGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTV 569
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
++ +L CA L + D L+D+Y+K G +++A +VF+
Sbjct: 570 TIMNLLPVCAQLAS-LHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSD 628
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
D+V + A++AG H AL + + M S P+ I++ L AC G G
Sbjct: 629 ARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGL 688
Query: 374 QLHSCLIKID----TDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
Q++ + + T + AV LI ++ L DA MP
Sbjct: 689 QIYDSIRTVHGMKPTMEQYACAVDLI---ARGGRLDDAYSFVTQMP 731
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 173/382 (45%), Gaps = 39/382 (10%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
E+HAHL+R H +S+ YA ++ +V+V ++A+I Y
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLV-FNAMIKCYSLV 80
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
G E+L F+ M G+ +E+T+ +LK+CS DL G+ VHG + TGF G +
Sbjct: 81 GPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIR 140
Query: 190 NTLVVMYAKCGQLGDSRK-------------------------------LFGSIVAPSVV 218
+V +Y G++GD++K LF + S+V
Sbjct: 141 IGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIV 200
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
SWN++ S + EA++LF EM+ G P+E ++ +L A L
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTA 260
Query: 279 XXXXXXXDQFS-ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWA 337
D + NALVD Y K G +E A A+F ++ ++VSWN +I+G + ++
Sbjct: 261 ESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFG 320
Query: 338 LALLNEMKSSG-ACPNVFTISSALKACAAVGFKDLGRQLHSCLI---KIDTDSDFFVAVG 393
+ L + M G PN T L C+ G + G +L ++ K++ ++ + A
Sbjct: 321 IDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA-- 378
Query: 394 LIDMYSKCEMLSDARRVYELMP 415
++D+ S+ +++A + + MP
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMP 400
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 133/317 (41%), Gaps = 38/317 (11%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y LL C + L G +H LIR GF R +V LY+ GR G A+K+ D+
Sbjct: 104 TYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM 163
Query: 111 TETDVV------------------------------VSWSALISGYVQNGFGKEALLAFN 140
+E +VV VSW+++IS + G +EAL F
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFC 223
Query: 141 DMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF-VANTLVVMYAKC 199
+M G +E T +VL + L+ G+ +H + +G D V N LV Y K
Sbjct: 224 EMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 200 GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSII 258
G L + +F + +VVSWN L S + +DLF M+ G + PNE + +
Sbjct: 284 GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGV 343
Query: 259 LNACA---GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-T 314
L C+ + G + + A+VD+ S+ GRI A + +
Sbjct: 344 LACCSYTGQVERGEELFGLMMERFKLEARTEHY--GAMVDLMSRSGRITEAFKFLKNMPV 401
Query: 315 HPDIVSWNAVIAGCVQH 331
+ + W ++++ C H
Sbjct: 402 NANAAMWGSLLSACRSH 418
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 35/257 (13%)
Query: 199 CGQLGDS---RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSL 255
CG L +S ++F I P+V+ +NA+ CY +E++ F M GI +E++
Sbjct: 46 CGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTY 105
Query: 256 SIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH 315
+ +L +C+ L + +V++Y+ GGR+ +A VF+E++
Sbjct: 106 APLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE 165
Query: 316 PD-------------------------------IVSWNAVIAGCVQHECNDWALALLNEM 344
+ IVSWN++I+ + + AL L EM
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 345 KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFF-VAVGLIDMYSKCEM 403
G P+ T+ + L A++G D G+ +HS DF V L+D Y K
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 404 LSDARRVYELMPKKDII 420
L A ++ M +++++
Sbjct: 286 LEAATAIFRKMQRRNVV 302
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 172/374 (45%), Gaps = 15/374 (4%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++T +L C G ++HA +I+ G + L+ +YSK G + ++ +
Sbjct: 86 TFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESV 145
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
E D+V SW+AL+SG+++NG GKEAL F M V+ +EFT SV+K C+ K L G
Sbjct: 146 EEKDLV-SWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQG 204
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALFSCYVQ 229
++VH M VVTG D + ++ Y+ G + ++ K++ S+ V V N+L S ++
Sbjct: 205 KQVHAMVVVTGRDLV-VLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIR 263
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ EA L RPN LS L C+ + D
Sbjct: 264 NRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKL 318
Query: 290 ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM--KSS 347
N L+DMY K G+I A +F I +VSW ++I + AL + EM + S
Sbjct: 319 CNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGS 378
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEML 404
G PN T + ACA G G++ + ++ ++ +V ID+ SK
Sbjct: 379 GVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVC--FIDILSKAGET 436
Query: 405 SDARRVYELMPKKD 418
+ R+ E M + D
Sbjct: 437 EEIWRLVERMMEND 450
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 135/272 (49%), Gaps = 13/272 (4%)
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
TF VL ACS+ GR+VH + + G ++ L+ MY+K G L DS ++F S+
Sbjct: 86 TFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESV 145
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR---NGS 269
+VSWNAL S ++++ EA+ +F M R + +EF+LS ++ CA L+ G
Sbjct: 146 EEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGK 205
Query: 270 XXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGC 328
A++ YS G I A+ V+ + H D V N++I+GC
Sbjct: 206 QVHAMVVVTGRDLVVL----GTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
Query: 329 VQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDF 388
+++ A L++ + PNV +SS+L C+ +G+Q+H ++ SD
Sbjct: 262 IRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDS 316
Query: 389 FVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ GL+DMY KC + AR ++ +P K ++
Sbjct: 317 KLCNGLMDMYGKCGQIVQARTIFRAIPSKSVV 348
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 20/289 (6%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ- 109
+ ++++ C + K L G ++HA ++ G ++S YS G A K+ +
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSL 245
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ TD V+ ++LISG ++N KEA L + + N S L CS DL +
Sbjct: 246 NVHTDEVM-LNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWI 299
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G+++H +++ GF SD + N L+ MY KCGQ+ +R +F +I + SVVSW ++ Y
Sbjct: 300 GKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAV 359
Query: 230 SDFCVEAVDLFKEMVR--GGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXX 284
+ V+A+++F+EM G+ PN + ++++AC AGL + G
Sbjct: 360 NGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPG 419
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVS-----WNAVIAGC 328
+ + +D+ SK G E + E + D S W AV++ C
Sbjct: 420 TEHYV--CFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSAC 466
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
ND LAL ++ + + T + L AC+ + + + GRQ+H+ +IK ++
Sbjct: 66 ND-TLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTA 124
Query: 394 LIDMYSKCEMLSDARRVYELMPKKDII 420
LIDMYSK L D+ RV+E + +KD++
Sbjct: 125 LIDMYSKYGHLVDSVRVFESVEEKDLV 151
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 161/348 (46%), Gaps = 1/348 (0%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
G H +IR FS D + N L+S+Y K A KL + +E +W+ ++ GY
Sbjct: 350 GKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYG 409
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
+ + + F + LG++ + + SV+ +CS + +G+ +H V T D
Sbjct: 410 KMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTIS 469
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
V N+L+ +Y K G L + ++F +V++WNA+ + YV + +A+ LF MV
Sbjct: 470 VVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSEN 528
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
+P+ +L +L AC + + + AL+DMY+K G +E +
Sbjct: 529 FKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSR 588
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
+F+ D V WN +I+G H + A+AL ++M+ S P T + L AC G
Sbjct: 589 ELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAG 648
Query: 368 FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+ G++L + + D + L+D+ S+ L +A MP
Sbjct: 649 LVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP 696
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 11/379 (2%)
Query: 38 NSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFG-FSHDPSFRNHLVSLYSK 96
+ Q FT P + +S C +G +H +++ G F + + V YSK
Sbjct: 119 SGQSPDHFTAPMV-----VSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSK 173
Query: 97 CGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV---KCNEFT 153
CG A + D+ + DVV +W+A+ISG+VQNG + L M G K N T
Sbjct: 174 CGFLQDACLVFDEMPDRDVV-AWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 154 FPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV 213
+ACS L GR +HG +V G S FV +++ Y+K G ++ F +
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXX 273
+ SW ++ + +S E+ D+F EM G+ P+ +S ++N +
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKA 352
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP-DIVSWNAVIAGCVQHE 332
D N+L+ MY K + A +F I+ + +WN ++ G + +
Sbjct: 353 FHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMK 412
Query: 333 CNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV 392
C+ + L ++++ G + + +S + +C+ +G LG+ LH ++K D V
Sbjct: 413 CHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVN 472
Query: 393 GLIDMYSKCEMLSDARRVY 411
LID+Y K L+ A R++
Sbjct: 473 SLIDLYGKMGDLTVAWRMF 491
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 174/369 (47%), Gaps = 15/369 (4%)
Query: 59 CVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA----RKLVDQSTETD 114
C +L G LH ++ G + ++ + S YSK G A R+L D+
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDED---- 295
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
+ SW+++I+ ++G +E+ F +M G+ + ++ + G+ H
Sbjct: 296 -MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFH 354
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP-SVVSWNALFSCYVQSDFC 233
G + F D V N+L+ MY K L + KLF I + +WN + Y +
Sbjct: 355 GFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCH 414
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA--N 291
V+ ++LF+++ GI + S + ++++C+ + G+ D + N
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHI--GAVLLGKSLHCYVVKTSLDLTISVVN 472
Query: 292 ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
+L+D+Y K G + A +F E ++++WNA+IA V E ++ A+AL + M S P
Sbjct: 473 SLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKP 531
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
+ T+ + L AC G + G+ +H + + + + + ++ LIDMY+KC L +R ++
Sbjct: 532 SSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF 591
Query: 412 ELMPKKDII 420
+ +KD +
Sbjct: 592 DAGNQKDAV 600
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 157/357 (43%), Gaps = 5/357 (1%)
Query: 59 CVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVS 118
C S SL + +A +I G S + + L+S Y+ G+ + ++ T D+ +
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFL- 92
Query: 119 WSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSV 178
W+++I + NG +L F M + G + FT P V+ AC+ ++G VHG+ +
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 179 V-TGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAV 237
GFD + V + V Y+KCG L D+ +F + VV+W A+ S +VQ+ +
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 238 DLFKEMVRGGI---RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
+M G +PN +L AC+ L +F +++
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMF 272
Query: 295 DMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVF 354
YSK G A F E+ D+ SW ++IA + + + + EM++ G P+
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 355 TISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
IS + + G+ H +I+ D V L+ MY K E+LS A +++
Sbjct: 333 VISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLF 389
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%), Gaps = 9/285 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S T+++S C ++ LG LH ++++ S N L+ LY K G A ++
Sbjct: 435 SATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF--- 491
Query: 111 TETDV-VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
E D V++W+A+I+ YV ++A+ F+ M K + T ++L AC L
Sbjct: 492 CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G+ +H T + + ++ L+ MYAKCG L SR+LF + V WN + S Y
Sbjct: 552 GQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGM 611
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXXXXXXXXXXXXDQ 287
A+ LF +M ++P + +L+AC AGL
Sbjct: 612 HGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKH 671
Query: 288 FSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH 331
+S LVD+ S+ G +E A + + PD V W +++ C+ H
Sbjct: 672 YS--CLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTH 714
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 4/253 (1%)
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
RK + + + G + FVA+ L+ YA G+ S ++F + + WN++ + +
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
++ F M+ G P+ F+ ++++ACA L +
Sbjct: 104 GDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 291 NA-LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGA 349
A V YSK G +++A VF+E+ D+V+W A+I+G VQ+ ++ L L +M S+G+
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 350 ---CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSD 406
PN T+ +AC+ +G GR LH +K S FV + YSK S+
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSE 283
Query: 407 ARRVYELMPKKDI 419
A + + +D+
Sbjct: 284 AYLSFRELGDEDM 296
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGY 102
++F I+ LL CV + SL G +H ++ + S L+ +Y+KCG
Sbjct: 527 ENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEK 586
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
+R+L D + D V W+ +ISGY +G + A+ F+ M VK TF ++L AC+
Sbjct: 587 SRELFDAGNQKDAVC-WNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACT 645
Query: 163 IKKDLNMGRKV----HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSV 217
+ G+K+ H V + LV + ++ G L ++ S+ +P
Sbjct: 646 HAGLVEQGKKLFLKMHQYDVKPNLKH----YSCLVDLLSRSGNLEEAESTVMSMPFSPDG 701
Query: 218 VSWNALF-SCYVQSDF 232
V W L SC +F
Sbjct: 702 VIWGTLLSSCMTHGEF 717
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
F A+ L+ Y+ G+ + VF +T DI WN++I + +L M S
Sbjct: 60 FVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLS 119
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDT-DSDFFVAVGLIDMYSKCEMLSD 406
G P+ FT + ACA + + +G +H ++K D + V + YSKC L D
Sbjct: 120 GQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQD 179
Query: 407 ARRVYELMPKKDII 420
A V++ MP +D++
Sbjct: 180 ACLVFDEMPDRDVV 193
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 168/375 (44%), Gaps = 44/375 (11%)
Query: 34 NVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSF---RNHL 90
N +S + + PP L+ + S+S+ +++HA ++R P + L
Sbjct: 14 NQLSTTATARFRLPPPEKLAVLIDK---SQSVDEVLQIHAAILRHNLLLHPRYPVLNLKL 70
Query: 91 VSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCN 150
Y+ G+ ++ L Q+ + D+ + ++A I+ NG +A L + + + N
Sbjct: 71 HRAYASHGKIRHSLALFHQTIDPDLFL-FTAAINTASINGLKDQAFLLYVQLLSSEINPN 129
Query: 151 EFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK--- 207
EFTF S+LK+CS K G+ +H + G D +VA LV +YAK G + ++K
Sbjct: 130 EFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFD 185
Query: 208 ----------------------------LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDL 239
LF S+ +VSWN + Y Q F +A+ L
Sbjct: 186 RMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALML 245
Query: 240 FKEMV-RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYS 298
F++++ G +P+E ++ L+AC+ + + L+DMYS
Sbjct: 246 FQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYS 305
Query: 299 KGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS-SGACPNVFTIS 357
K G +E AV VF + DIV+WNA+IAG H + AL L NEM+ +G P T
Sbjct: 306 KCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFI 365
Query: 358 SALKACAAVGFKDLG 372
L+ACA G + G
Sbjct: 366 GTLQACAHAGLVNEG 380
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 142/318 (44%), Gaps = 44/318 (13%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++++LL C ++KS G +H H+++FG DP LV +Y+K G A+K+ D+
Sbjct: 132 TFSSLLKSC-STKS---GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 111 TETDVV------------------------------VSWSALISGYVQNGFGKEALLAFN 140
E +V VSW+ +I GY Q+GF +AL+ F
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 141 DMCMLG-VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC 199
+ G K +E T + L ACS L GR +H + + V L+ MY+KC
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 200 GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG--GIRPNEFSLSI 257
G L ++ +F +V+WNA+ + Y + +A+ LF EM +G G++P + +
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM-QGITGLQPTDITFIG 366
Query: 258 ILNAC--AGLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT 314
L AC AGL N G + + LV + + G+++ A + +
Sbjct: 367 TLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY--GCLVSLLGRAGQLKRAYETIKNMN 424
Query: 315 -HPDIVSWNAVIAGCVQH 331
D V W++V+ C H
Sbjct: 425 MDADSVLWSSVLGSCKLH 442
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 36/257 (14%)
Query: 196 YAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSL 255
YA G++ S LF + P + + A + + +A L+ +++ I PNEF+
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 256 SIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG-------------- 301
S +L +C+ ++G D + A LVD+Y+KGG
Sbjct: 134 SSLLKSCS-TKSGKLIHTHVLKFGLGI---DPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 302 -----------------RIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+E A A+F+ + DIVSWN +I G QH + AL L ++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 345 KSSGAC-PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEM 403
+ G P+ T+ +AL AC+ +G + GR +H + + V GLIDMYSKC
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 404 LSDARRVYELMPKKDII 420
L +A V+ P+KDI+
Sbjct: 310 LEEAVLVFNDTPRKDIV 326
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 169/388 (43%), Gaps = 50/388 (12%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCG--RFGYARKLVDQSTETDVVVSWSALISGYV 127
++H H++R G L+ +K G YAR++++ + + W+A+I GY
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFL-WTAVIRGYA 125
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
G EA+ + M + FTF ++LKAC KDLN+GR+ H + F GF
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT----FRLRGF 181
Query: 188 ----VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY---------------- 227
V NT++ MY KC + +RK+F + V+SW L + Y
Sbjct: 182 CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 228 ---------------VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GLRNGSX 270
Q+ EA++ F M + GIR +E +++ ++ACA G +
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD 301
Query: 271 XXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQ 330
+AL+DMYSK G +E AV VF + + ++ +++++I G
Sbjct: 302 RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLAT 361
Query: 331 HECNDWALALLNEMKSSGAC-PNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDS 386
H AL L + M + PN T AL AC+ G D GRQ+ + + +
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421
Query: 387 DFFVAVGLIDMYSKCEMLSDARRVYELM 414
D + ++D+ + L +A + + M
Sbjct: 422 DHYTC--MVDLLGRTGRLQEALELIKTM 447
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 142/331 (42%), Gaps = 43/331 (12%)
Query: 41 CFQSFTKPPISYT--NLLSQCVASKSLTLGMELHAHLIRF-GFSHDPSFRNHLVSLYSKC 97
C + P+S+T LL C K L LG + HA R GF N ++ +Y KC
Sbjct: 139 CMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKC 197
Query: 98 GRFGYARKLVDQSTETDVV------------------------------VSWSALISGYV 127
ARK+ D+ E DV+ V+W+A+++G+
Sbjct: 198 ESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFA 257
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
QN +EAL F+ M G++ +E T + AC+ + ++ +G+
Sbjct: 258 QNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDH 317
Query: 188 V--ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV- 244
V + L+ MY+KCG + ++ +F S+ +V +++++ EA+ LF MV
Sbjct: 318 VVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVT 377
Query: 245 RGGIRPNEFSLSIILNAC--AGLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG 301
+ I+PN + L AC +GL + G D ++ +VD+ + G
Sbjct: 378 QTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT--CMVDLLGRTG 435
Query: 302 RIENAVAVFEEIT-HPDIVSWNAVIAGCVQH 331
R++ A+ + + ++ P W A++ C H
Sbjct: 436 RLQEALELIKTMSVEPHGGVWGALLGACRIH 466
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 115/289 (39%), Gaps = 35/289 (12%)
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD--SRKLFGSIVAPSVVSWNAL 223
+LN +++HG + G D ++ L+ K G D +R++ + + W A+
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 224 FSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXX 283
Y EA+ ++ M + I P F+ S +L AC +++ +
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 284 XXDQFSANALVDMY-------------------------------SKGGRIENAVAVFEE 312
+ N ++DMY ++ G +E A +FE
Sbjct: 181 FCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFES 240
Query: 313 ITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
+ D+V+W A++ G Q+ AL + M+ SG + T++ + ACA +G
Sbjct: 241 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYA 300
Query: 373 RQLHSCLIKIDTDSDFFVAVG--LIDMYSKCEMLSDARRVYELMPKKDI 419
+ K V +G LIDMYSKC + +A V+ M K++
Sbjct: 301 DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNV 349
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%)
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
A V E + + W AVI G D A+A+ M+ P FT S+ LKAC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 366 VGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ +LGRQ H+ ++ +V +IDMY KCE + AR+V++ MP++D+I
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVI 216
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 172/394 (43%), Gaps = 46/394 (11%)
Query: 63 KSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSAL 122
KS +++A +I G S +V K YA +L +Q + +V + ++++
Sbjct: 21 KSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFL-YNSI 79
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVKC-NEFTFPSVLKACSIKKDLNMGRKVHG------ 175
I Y N + + + + + + FTFP + K+C+ +G++VHG
Sbjct: 80 IRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG 139
Query: 176 --MSVVTG-----------------------FDSDGFVANTLVVMYAKCGQLGDSRKLFG 210
VVT ++ D N+L+ YA+ GQ+ ++ LF
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 211 SIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSX 270
++ ++VSW A+ S Y VEA+D F+EM GI P+E SL +L +CA L +
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 271 XXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQ 330
NAL++MYSK G I A+ +F ++ D++SW+ +I+G
Sbjct: 260 GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAY 319
Query: 331 HECNDWALALLNEMKSSGACPNVFTISSALKACAAVG-------FKDLGRQLHSCLIKID 383
H A+ NEM+ + PN T L AC+ VG + D+ RQ + KI+
Sbjct: 320 HGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE 379
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
LID+ ++ L A + + MP K
Sbjct: 380 HYG------CLIDVLARAGKLERAVEITKTMPMK 407
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 37/337 (10%)
Query: 43 QSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
+SF P ++ + C + S LG ++H HL +FG N L+ +Y K
Sbjct: 102 KSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLV 161
Query: 102 YARKLVDQSTETDVV------------------------------VSWSALISGYVQNGF 131
A K+ D+ E DV+ VSW+A+ISGY G
Sbjct: 162 DAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGC 221
Query: 132 GKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANT 191
EA+ F +M + G++ +E + SVL +C+ L +G+ +H + GF V N
Sbjct: 222 YVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNA 281
Query: 192 LVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPN 251
L+ MY+KCG + + +LFG + V+SW+ + S Y A++ F EM R ++PN
Sbjct: 282 LIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPN 341
Query: 252 EFSLSIILNACAGL---RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVA 308
+ +L+AC+ + + G + + L+D+ ++ G++E AV
Sbjct: 342 GITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG--CLIDVLARAGKLERAVE 399
Query: 309 VFEEI-THPDIVSWNAVIAGCVQHECNDWALALLNEM 344
+ + + PD W ++++ C D AL ++ +
Sbjct: 400 ITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHL 436
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 131/311 (42%), Gaps = 35/311 (11%)
Query: 142 MCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ 201
M G++ E F L+ K N +K++ ++ G F+ +V K
Sbjct: 1 MAFHGIREVENYFIPFLQRV---KSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIED 57
Query: 202 LGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIR-PNEFSLSIILN 260
+ + +LF + P+V +N++ Y + + + ++K+++R P+ F+ +
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 261 ACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVS 320
+CA L + + NAL+DMY K + +A VF+E+ D++S
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 321 WN-------------------------------AVIAGCVQHECNDWALALLNEMKSSGA 349
WN A+I+G C A+ EM+ +G
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
P+ ++ S L +CA +G +LG+ +H + V LI+MYSKC ++S A +
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 410 VYELMPKKDII 420
++ M KD+I
Sbjct: 298 LFGQMEGKDVI 308
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 9/288 (3%)
Query: 49 PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
P +Y LL +C K T G +HA + GF+ + + L+ LY+ G A L
Sbjct: 108 PETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILF- 166
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+S + ++ W+A+ISGYVQ G +E L + DM + +++TF SV +ACS L
Sbjct: 167 RSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLE 226
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYV 228
G++ H + + S+ V + LV MY KC D ++F + +V++W +L S Y
Sbjct: 227 HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXXXXXXXXXXXXD 286
E + F++M G RPN + ++L AC GL +
Sbjct: 287 YHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEG 346
Query: 287 QFSANALVDMYSKGGRIENAVAVFEE---ITHPDIVSWNAVIAGCVQH 331
Q A A+VD + GR++ A + HP + W +++ C H
Sbjct: 347 QHYA-AMVDTLGRAGRLQEAYEFVMKSPCKEHPPV--WGSLLGACRIH 391
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 125/274 (45%), Gaps = 8/274 (2%)
Query: 146 GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS 205
G++ T+ +L+ C +K+ G+++H V GF + ++ L+++YA G L +
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 206 RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL 265
LF S+ ++ WNA+ S YVQ E + ++ +M + I P++++ + + AC+ L
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
+ +ALVDMY K + VF++++ ++++W ++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---I 382
+G H L +MK G PN T L AC G D G + + + I
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGI 342
Query: 383 DTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPK 416
+ + + A ++D + L +A YE + K
Sbjct: 343 EPEGQHYAA--MVDTLGRAGRLQEA---YEFVMK 371
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 86/174 (49%)
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
G++ + +++L C + + +++ L+ +Y+ G ++ A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
+F + D++ WNA+I+G VQ L + +M+ + P+ +T +S +AC+A+
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 367 GFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ G++ H+ +IK S+ V L+DMY KC SD RV++ + +++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 164/357 (45%), Gaps = 47/357 (13%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLV--SLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
++HA ++ G + S L+ + S G YA KL D+ + DV + + ++ G
Sbjct: 30 QIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSIC-NHVLRGSA 88
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
Q+ ++ + + +M GV + +TF VLKACS + + G HG V GF + +
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
V N L++ +A CG LG + +LF V+W+++ S Y + EA+ LF EM
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM---- 204
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
DQ + N ++ K +++A
Sbjct: 205 -----------------------------------PYKDQVAWNVMITGCLKCKEMDSAR 229
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
+F+ T D+V+WNA+I+G V AL + EM+ +G P+V TI S L ACA +G
Sbjct: 230 ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 368 FKDLGRQLHSCLIKI-DTDSDFFVAV----GLIDMYSKCEMLSDARRVYELMPKKDI 419
+ G++LH +++ S +V LIDMY+KC + A V+ + +D+
Sbjct: 290 DLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 150/363 (41%), Gaps = 47/363 (12%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++T +L C + + G H ++R GF + +N L+ ++ CG G A +L D S
Sbjct: 114 TFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDS 173
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ V +WS++ SGY + G EA+ F++M
Sbjct: 174 AKAHKV-AWSSMTSGYAKRGKIDEAMRLFDEMPY-------------------------- 206
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
D N ++ KC ++ +R+LF VV+WNA+ S YV
Sbjct: 207 -------------KDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNC 253
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
+ EA+ +FKEM G P+ ++ +L+ACA L +
Sbjct: 254 GYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYV 313
Query: 291 -----NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
NAL+DMY+K G I+ A+ VF + D+ +WN +I G H ++ + EM+
Sbjct: 314 GTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQ 372
Query: 346 SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEML 404
PN T + AC+ G D GR+ S + + G ++DM + L
Sbjct: 373 RLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQL 432
Query: 405 SDA 407
+A
Sbjct: 433 EEA 435
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 13/242 (5%)
Query: 96 KCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFP 155
KC AR+L D+ TE DVV +W+A+ISGYV G+ KEAL F +M G + T
Sbjct: 221 KCKEMDSARELFDRFTEKDVV-TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTIL 279
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF-----VANTLVVMYAKCGQLGDSRKLFG 210
S+L AC++ DL G+++H + T S + N L+ MYAKCG + + ++F
Sbjct: 280 SLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFR 339
Query: 211 SIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRN 267
+ + +WN L + ++++F+EM R + PNE + ++ AC+ +
Sbjct: 340 GVKDRDLSTWNTLI-VGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDE 398
Query: 268 GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIA 326
G + +VDM + G++E A E + P+ + W ++
Sbjct: 399 GRKYFSLMRDMYNIEPNIKHYG--CMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLG 456
Query: 327 GC 328
C
Sbjct: 457 AC 458
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFG------FSHDPSFRNHLVSLYSKCGRFGYA 103
++ +LLS C L G LH +++ + P + N L+ +Y+KCG A
Sbjct: 276 VTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIW-NALIDMYAKCGSIDRA 334
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
++ + D + +W+ LI G + + ++ F +M L V NE TF V+ ACS
Sbjct: 335 IEVFRGVKDRD-LSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSH 392
Query: 164 KKDLNMGRKVHG-MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWN 221
++ GRK M + + + +V M + GQL ++ S+ + P+ + W
Sbjct: 393 SGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWR 452
Query: 222 ALF 224
L
Sbjct: 453 TLL 455
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 158/352 (44%), Gaps = 39/352 (11%)
Query: 51 SYTNLL-SQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLY-SKCGRFGYARKLVD 108
+Y L+ +QC + L ++HA LI+ G D + +++ + YA +
Sbjct: 26 TYLRLIDTQCSTMRELK---QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFT 82
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMC--MLGVKCNEFTFPSVLKACSIKKD 166
+ + V W+ +I G+ ++ F + A+ F DM VK T+PSV KA
Sbjct: 83 RINHKNPFV-WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQ 141
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMY------------------------------ 196
GR++HGM + G + D F+ NT++ MY
Sbjct: 142 ARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 197 -AKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSL 255
AKCG + ++ LF + + VSWN++ S +V++ +A+D+F+EM ++P+ F++
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 256 SIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH 315
+LNACA L + AL+DMY K G IE + VFE
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 316 PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
+ WN++I G + + A+ L +E++ SG P+ + L ACA G
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM--KSSGACPNVFTISSALKAC 363
A VF I H + WN +I G + + A+++ +M S P T S KA
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY 136
Query: 364 AAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+G GRQLH +IK + D F+ ++ MY C L +A R++ M D++
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 188/450 (41%), Gaps = 93/450 (20%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF--------------- 100
L C +S +T G ++H +++ G + N ++++Y+KC
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 101 --------GY--ARKLVDQSTETDVV-----VSWSALISGYVQNGFGKEALLAFNDMCML 145
GY +R+L D DV+ VS++ LI GY QN EA+ F +M L
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 146 GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS 205
G+ NE T +V+ ACS + R + +++ + FV+ L+ MY C L D+
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 206 RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFK------------------------ 241
RKLF + ++V+WN + + Y ++ +A +LF
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLD 287
Query: 242 -------EMVRGGIRPNEFSLSIILNACA-------GLR-NGSXXXXX------------ 274
EM+R G++P+E + +L+A A GL+ +G+
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 275 --XXXXXXXXXXXDQFSA---------NALVDMYSKGGRIENAVAVFEEITHPDIVSWNA 323
QF A NAL+ + K G +E A VF++ DI SWNA
Sbjct: 348 HFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNA 407
Query: 324 VIAGCVQHECNDWALALLNEMKSSGAC-PNVFTISSALKACAAVGFKDLGRQLHSCLIKI 382
+I+G Q AL L EM SS P+ T+ S A +++G + G++ H L
Sbjct: 408 MISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS 467
Query: 383 DTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
+ + +IDMY+KC + A ++
Sbjct: 468 TIPPNDNLTAAIIDMYAKCGSIETALNIFH 497
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 161/368 (43%), Gaps = 41/368 (11%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N +++ YSK G A +L DQ TE D+V SW +I G ++ EAL+ + +M G+
Sbjct: 243 NVMLNGYSKAGLIEQAEELFDQITEKDIV-SWGTMIDGCLRKNQLDEALVYYTEMLRCGM 301
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYA---------- 197
K +E +L A + + G ++HG V GFD F+ T++ YA
Sbjct: 302 KPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQ 361
Query: 198 ---------------------KCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEA 236
K G + +R++F + SWNA+ S Y QS A
Sbjct: 362 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLA 421
Query: 237 VDLFKEMVRGG-IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVD 295
+ LF+EM+ ++P+ ++ + +A + L + + A++D
Sbjct: 422 LHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIID 481
Query: 296 MYSKGGRIENAVAVFEE---ITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
MY+K G IE A+ +F + I+ I WNA+I G H AL L ++++S PN
Sbjct: 482 MYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPN 541
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDARR 409
T L AC G +LG+ + I+ D + ++D+ K L +A+
Sbjct: 542 SITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGC--MVDLLGKAGRLEEAKE 599
Query: 410 VYELMPKK 417
+ + MP K
Sbjct: 600 MIKKMPVK 607
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 62/331 (18%)
Query: 151 EFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR---- 206
E S L +C+ D+ GR++H + +G DS+G++ N+++ MYAKC L D+
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 207 ---------------------------KLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDL 239
KLF + S VS+ L Y Q++ EA++L
Sbjct: 101 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMEL 160
Query: 240 FKEMVRGGIRPNEFSLSIILNA---------CAGLRNGSXXXXXXXXXXXXXXXXDQF-- 288
F+EM GI NE +L+ +++A C L++ + +
Sbjct: 161 FREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 220
Query: 289 --------------------SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGC 328
+ N +++ YSK G IE A +F++IT DIVSW +I GC
Sbjct: 221 CLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGC 280
Query: 329 VQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDF 388
++ D AL EM G P+ + L A A G QLH ++K D
Sbjct: 281 LRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYD 340
Query: 389 FVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
F+ +I Y+ + A + +E K I
Sbjct: 341 FLQATIIHFYAVSNDIKLALQQFEASVKDHI 371
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 138/325 (42%), Gaps = 43/325 (13%)
Query: 47 KP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGF----------------SHDPSF--- 86
KP + +LLS S + G++LH +++ GF S+D
Sbjct: 302 KPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQ 361
Query: 87 ------------RNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKE 134
RN L++ + K G AR++ DQ+ + D+ SW+A+ISGY Q+ +
Sbjct: 362 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF-SWNAMISGYAQSLSPQL 420
Query: 135 ALLAFNDMCMLG-VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLV 193
AL F +M VK + T SV A S L G++ H + + + ++
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAII 480
Query: 194 VMYAKCGQLGDSRKLF---GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
MYAKCG + + +F +I + ++ WNA+ A+DL+ ++ I+P
Sbjct: 481 DMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKP 540
Query: 251 NEFSLSIILNAC--AGLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
N + +L+AC AGL G + +VD+ K GR+E A
Sbjct: 541 NSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHY--GCMVDLLGKAGRLEEAK 598
Query: 308 AVFEEI-THPDIVSWNAVIAGCVQH 331
+ +++ D++ W +++ H
Sbjct: 599 EMIKKMPVKADVMIWGMLLSASRTH 623
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW--ALALLNE 343
D S N +VD Y + R+ +A+ +F+ + VS+ +I G Q+ N W A+ L E
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQN--NQWSEAMELFRE 163
Query: 344 MKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEM 403
M++ G N T+++ + AC+ +G R L S IK+ + FV+ L+ MY C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 404 LSDARRVYELMPKKDII 420
L DAR++++ MP+++++
Sbjct: 224 LKDARKLFDEMPERNLV 240
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 34 NVVSNSQCFQSFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRN---H 89
++S+SQ KP I+ ++ S + SL G H +L FS P N
Sbjct: 427 EMISSSQ-----VKPDAITMVSVFSAISSLGSLEEGKRAHDYL---NFSTIPPNDNLTAA 478
Query: 90 LVSLYSKCGRFGYARKLVDQSTE--TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
++ +Y+KCG A + Q+ + + W+A+I G +G K AL ++D+ L +
Sbjct: 479 IIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPI 538
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKV-HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
K N TF VL AC + +G+ M G + D +V + K G+L +++
Sbjct: 539 KPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAK 598
Query: 207 KLFGSI-VAPSVVSWNALFS 225
++ + V V+ W L S
Sbjct: 599 EMIKKMPVKADVMIWGMLLS 618
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 165/358 (46%), Gaps = 6/358 (1%)
Query: 67 LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
LG +LH ++ G D N L+S+Y+K R RK+ D+ D V S+ ++I+
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTV-SYCSIINSC 123
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS-IKKDLNMGRKVHGMSVVTGFDSD 185
Q+G EA+ +M G S+L C+ + + R H + +V +
Sbjct: 124 CQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQE 183
Query: 186 GFVANT-LVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV 244
+ +T LV MY K + +F + + VSW A+ S V + VDLF+ M
Sbjct: 184 SVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQ 243
Query: 245 RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXX-XXDQFSANALVDMYSKGGRI 303
R +RPN +L +L AC L GS D+ A + MY + G +
Sbjct: 244 RENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNV 303
Query: 304 ENAVAVFEEITHPDIVSWNAVIAGCVQH-ECNDWALALLNEMKSSGACPNVFTISSALKA 362
+ +FE D+V W+++I+G + +C++ + LLN+M+ G N T+ + + A
Sbjct: 304 SLSRVLFETSKVRDVVMWSSMISGYAETGDCSE-VMNLLNQMRKEGIEANSVTLLAIVSA 362
Query: 363 CAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
C +HS ++K S + LIDMY+KC LS AR V+ + +KD++
Sbjct: 363 CTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLV 420
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 168/381 (44%), Gaps = 48/381 (12%)
Query: 25 SRTIVDSQTNVVSNSQCFQSF----TKPPISYTNLLSQCVASKSLTLGM----------- 69
S +VD ++ F F K +S+T ++S CVA+++ +G+
Sbjct: 188 STALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENL 247
Query: 70 -------------------------ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
E+H R G D +++Y +CG +R
Sbjct: 248 RPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSR 307
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
L + S DVV+ WS++ISGY + G E + N M G++ N T +++ AC+
Sbjct: 308 VLFETSKVRDVVM-WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNS 366
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
L+ VH + GF S + N L+ MYAKCG L +R++F + +VSW+++
Sbjct: 367 TLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMI 426
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXXXXXXXXX 282
+ Y EA+++FK M++GG ++ + IL+AC AGL +
Sbjct: 427 NAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMP 486
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDWALALL 341
+ ++ +++ + G+I++A V + P W+++++ C H D A ++
Sbjct: 487 VTLEHYA--CYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKII 544
Query: 342 -NE-MKSSGACPNVFTISSAL 360
NE MKS P + + S +
Sbjct: 545 ANELMKSEPDNPANYVLLSKI 565
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 150/362 (41%), Gaps = 43/362 (11%)
Query: 47 KPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSL------YSKCGRF 100
+ +SY ++++ C L M+L + +GF L++L SK R
Sbjct: 111 RDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARM 170
Query: 101 GYARKLVDQSTETDVV------------------------------VSWSALISGYVQNG 130
+A LVD+ + V+ VSW+A+ISG V N
Sbjct: 171 FHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQ 230
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG----RKVHGMSVVTGFDSDG 186
+ + F M ++ N T SVL AC +LN G +++HG S G +D
Sbjct: 231 NYEMGVDLFRAMQRENLRPNRVTLLSVLPACV---ELNYGSSLVKEIHGFSFRHGCHADE 287
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
+ + MY +CG + SR LF + VV W+++ S Y ++ C E ++L +M +
Sbjct: 288 RLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE 347
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
GI N +L I++AC S NAL+DMY+K G + A
Sbjct: 348 GIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAA 407
Query: 307 VAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
VF E+T D+VSW+++I H AL + M G + + L AC
Sbjct: 408 REVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHA 467
Query: 367 GF 368
G
Sbjct: 468 GL 469
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 46/370 (12%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLV--SLYSKCGRFGYARKLVDQST 111
+LL+ C ++LT ++H I++G D F L+ S YAR+L+
Sbjct: 10 SLLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKACSIKKDLNMG 170
E D + ++ L+ GY ++ ++ F +M G V + F+F V+KA + L G
Sbjct: 67 EPDAFM-FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
++H ++ G +S FV TL+ MY CG + +RK+F + P++V+WNA+ + +
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
+ A ++F +M+ +RN + S
Sbjct: 186 NDVAGAREIFDKML--------------------VRNHT-------------------SW 206
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
N ++ Y K G +E+A +F E+ H D VSW+ +I G + + + E++ +G
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
PN +++ L AC+ G + G+ LH + K V LIDMYS+C + AR V
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 411 YELMPKKDII 420
+E M +K I
Sbjct: 327 FEGMQEKRCI 336
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 119/271 (43%), Gaps = 16/271 (5%)
Query: 87 RNH-----LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFND 141
RNH +++ Y K G A+++ + D V SWS +I G NG E+ L F +
Sbjct: 201 RNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV-SWSTMIVGIAHNGSFNESFLYFRE 259
Query: 142 MCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ 201
+ G+ NE + VL ACS G+ +HG G+ V N L+ MY++CG
Sbjct: 260 LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGN 319
Query: 202 LGDSRKLF-GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
+ +R +F G +VSW ++ + EAV LF EM G+ P+ S +L+
Sbjct: 320 VPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLH 379
Query: 261 AC--AGL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HP 316
AC AGL G + + +VD+Y + G+++ A ++ P
Sbjct: 380 ACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY--GCMVDLYGRSGKLQKAYDFICQMPIPP 437
Query: 317 DIVSWNAVIAGCVQH---ECNDWALALLNEM 344
+ W ++ C H E + LNE+
Sbjct: 438 TAIVWRTLLGACSSHGNIELAEQVKQRLNEL 468
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+S T +LS C S S G LH + + G+S S N L+ +YS+CG AR + +
Sbjct: 270 VSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEG 329
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
E +VSW+++I+G +G G+EA+ FN+M GV + +F S+L ACS +
Sbjct: 330 MQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEE 389
Query: 170 GRKVHG-MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF 224
G M V + + +V +Y + G+L + + + P+ + W L
Sbjct: 390 GEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 144/319 (45%), Gaps = 42/319 (13%)
Query: 49 PISY--TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P +Y T++L C L + E+HA +++ GF S ++ +Y K G A+K+
Sbjct: 125 PDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKM 180
Query: 107 VDQSTETDVV------------------------------VSWSALISGYVQNGFGKEAL 136
D+ + D V V W+A+I G V+N +AL
Sbjct: 181 FDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKAL 240
Query: 137 LAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMY 196
F +M M V NEFT VL ACS L +GR VH + FV N L+ MY
Sbjct: 241 ELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMY 300
Query: 197 AKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
++CG + ++R++F + V+S+N + S VEA++ F++MV G RPN+ +L
Sbjct: 301 SRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLV 360
Query: 257 IILNACA--GLRN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
+LNAC+ GL + G + + +VD+ + GR+E A E I
Sbjct: 361 ALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYG--CIVDLLGRVGRLEEAYRFIENI 418
Query: 314 -THPDIVSWNAVIAGCVQH 331
PD + +++ C H
Sbjct: 419 PIEPDHIMLGTLLSACKIH 437
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 176/411 (42%), Gaps = 44/411 (10%)
Query: 44 SFTKPPISYT-------NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSK 96
+F + P S T L+S + K++ +HA +IR D L+ + S
Sbjct: 14 TFRRDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCST 73
Query: 97 CGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPS 156
YA + + +V + ++A+I G+V +G + + ++ M V + + S
Sbjct: 74 LDSVDYAYDVFSYVSNPNVYL-YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITS 132
Query: 157 VLKACSIKKDLNMGRKVHGMSVVTGF-------------------------------DSD 185
VLKAC DL + R++H + GF D D
Sbjct: 133 VLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRD 188
Query: 186 GFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR 245
A ++ Y++CG + ++ +LF + V W A+ V++ +A++LF+EM
Sbjct: 189 HVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQM 248
Query: 246 GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
+ NEF+ +L+AC+ L F NAL++MYS+ G I
Sbjct: 249 ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINE 308
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
A VF + D++S+N +I+G H + A+ +M + G PN T+ + L AC+
Sbjct: 309 ARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSH 368
Query: 366 VGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYELMP 415
G D+G ++ + + ++ G ++D+ + L +A R E +P
Sbjct: 369 GGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP 419
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 30/295 (10%)
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
T SVL++C K++ +H + T D D FV L+ + + + + +F +
Sbjct: 31 TLISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC---------- 262
P+V + A+ +V S + V L+ M+ + P+ + ++ +L AC
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 263 ------------AGLR-----NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
GL+ S D +A +++ YS+ G I+
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
A+ +F+++ D V W A+I G V+++ + AL L EM+ N FT L AC+
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
Query: 366 VGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+G +LGR +HS + + FV LI+MYS+C +++ARRV+ +M KD+I
Sbjct: 268 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVI 322
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 158/347 (45%), Gaps = 40/347 (11%)
Query: 108 DQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS--IKK 165
+QST ++ VSW++ I+ +NG EA F+DM + GV+ N TF ++L C
Sbjct: 29 NQST-SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSG 87
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVA--------------------------------NTLV 193
+G +HG + G D + + NT++
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 194 VMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
Y + GQ+ ++ K+F + ++SW A+ + +V+ + EA+ F+EM G++P+
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
++ LNAC L S + +N+L+D+Y + G +E A VF +
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
+VSWN+VI G + +L +M+ G P+ T + AL AC+ VG + G
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL 327
Query: 374 ---QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
Q+ C +I + + L+D+YS+ L DA ++ + MP K
Sbjct: 328 RYFQIMKCDYRISPRIEHYGC--LVDLYSRAGRLEDALKLVQSMPMK 372
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 157/328 (47%), Gaps = 51/328 (15%)
Query: 50 ISYTNLLSQC--VASKSLTLGMELHAHLIRFGFSHDPSFRNH------LVSLYSKCGRF- 100
I++ LLS C S S LG LH + + G RNH ++ +YSK GRF
Sbjct: 72 ITFIALLSGCGDFTSGSEALGDLLHGYACKLGLD-----RNHVMVGTAIIGMYSKRGRFK 126
Query: 101 ----------------------GYAR--------KLVDQSTETDVVVSWSALISGYVQNG 130
GY R K+ D+ E D++ SW+A+I+G+V+ G
Sbjct: 127 KARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLI-SWTAMINGFVKKG 185
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVAN 190
+ +EALL F +M + GVK + + L AC+ L+ G VH + F ++ V+N
Sbjct: 186 YQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN 245
Query: 191 TLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
+L+ +Y +CG + +R++F ++ +VVSWN++ + + E++ F++M G +P
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKP 305
Query: 251 NEFSLSIILNACA--GL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
+ + + L AC+ GL G + + LVD+YS+ GR+E+A+
Sbjct: 306 DAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYG--CLVDLYSRAGRLEDAL 363
Query: 308 AVFEEI-THPDIVSWNAVIAGCVQHECN 334
+ + + P+ V +++A C H N
Sbjct: 364 KLVQSMPMKPNEVVIGSLLAACSNHGNN 391
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 34/241 (14%)
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXX 273
+ + VSW + + ++ EA F +M G+ PN + +L+ C +GS
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALG 92
Query: 274 XXXXXXXXXXXXDQ----------------------------------FSANALVDMYSK 299
D+ + N ++D Y +
Sbjct: 93 DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMR 152
Query: 300 GGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSA 359
G+++NA +F+++ D++SW A+I G V+ + AL EM+ SG P+ I +A
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAA 212
Query: 360 LKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
L AC +G G +H ++ D ++ V+ LID+Y +C + AR+V+ M K+ +
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 420 I 420
+
Sbjct: 273 V 273
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV 115
L+ C +L+ G+ +H +++ F ++ N L+ LY +CG +AR+ V + E
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ-VFYNMEKRT 271
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
VVSW+++I G+ NG E+L+ F M G K + TF L ACS ++G G
Sbjct: 272 VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS-----HVGLVEEG 326
Query: 176 MSVVTGFDSDGFVA------NTLVVMYAKCGQLGDSRKLFGSI-VAPS-VVSWNALFSCY 227
+ D ++ LV +Y++ G+L D+ KL S+ + P+ VV + L +C
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 228 VQSDFCVEAVDLFKEM 243
+ V A L K +
Sbjct: 387 NHGNNIVLAERLMKHL 402
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 140/312 (44%), Gaps = 34/312 (10%)
Query: 139 FNDMCMLGVKCNEFTFPSVLKACSIKK--DLNMGRKVHGMSVVTGFDSDGFVANTLVVMY 196
F +M V + TFP V KAC+ KK DL + + +H ++ G SD F NTL+ +Y
Sbjct: 103 FVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVY 162
Query: 197 A-------------------------------KCGQLGDSRKLFGSIVAPSVVSWNALFS 225
+ K ++ +R+LF S+ +VSWN+L S
Sbjct: 163 SLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLIS 222
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX 285
Y Q + C EA+ LF EMV G++P+ ++ L+ACA +
Sbjct: 223 GYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFI 282
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
D F A LVD Y+K G I+ A+ +FE + + +WNA+I G H + + +M
Sbjct: 283 DSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMV 342
Query: 346 SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKI-DTDSDFFVAVGLIDMYSKCEML 404
SSG P+ T S L C+ G D R L + + D + + + D+ + ++
Sbjct: 343 SSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLI 402
Query: 405 SDARRVYELMPK 416
+A + E MPK
Sbjct: 403 EEAAEMIEQMPK 414
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 143/340 (42%), Gaps = 42/340 (12%)
Query: 48 PPISYTN--LLSQCVASKS--LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
PP +T + C A K+ LTL LH +RFG D N L+ +YS A
Sbjct: 112 PPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSA 171
Query: 104 RKLVDQSTETDVV------------------------------VSWSALISGYVQNGFGK 133
+L D++ + DVV VSW++LISGY Q +
Sbjct: 172 LQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCR 231
Query: 134 EALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLV 193
EA+ F++M LG+K + S L AC+ D G+ +H + D F+A LV
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLV 291
Query: 194 VMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
YAKCG + + ++F ++ +WNA+ + VD F++MV GI+P+
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
Query: 254 SLSIILNAC--AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE 311
+ +L C +GL + + + D+ + G IE A + E
Sbjct: 352 TFISVLVGCSHSGLVD-EARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIE 410
Query: 312 EI-----THPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
++ +++W+ ++ GC H + A N +K+
Sbjct: 411 QMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKA 450
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 124/309 (40%), Gaps = 49/309 (15%)
Query: 157 VLKACSIKKDLNMGRKVHGMSVVTG-----FDSDGFVANTLVVMYAKCGQLGDSRKL--- 208
+LK C K L+ + H + +G F + AN L + + S+++
Sbjct: 10 LLKLCRTLKHLH---QFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSY 66
Query: 209 ----FGSIVAPSVVSWNALFS-CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
F I PS +N + C + + + F EM R + P+ + + ACA
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 264 GLRNGSXXXXXXX--XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE------ITH 315
+NG D F+ N L+ +YS I++A+ +F+E +T+
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 316 -------------------------PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
D+VSWN++I+G Q A+ L +EM + G
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
P+ I S L ACA G G+ +H + D F+A GL+D Y+KC + A +
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 411 YELMPKKDI 419
+EL K +
Sbjct: 307 FELCSDKTL 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWA-LALLNEMKSSGACPNVFTISSALK 361
+ A +VF IT+P +N +I C HE + + EM+ P+ T K
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 362 ACAAVGFKDLG--RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
ACAA DL + LH ++ SD F LI +YS + A ++++ P++D+
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV 183
Query: 420 I 420
+
Sbjct: 184 V 184
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 156/364 (42%), Gaps = 49/364 (13%)
Query: 49 PISYTNLLSQCVASKSLT--LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P SYT S V + S G L AH+ +FGF + L+ YS GR ARK+
Sbjct: 869 PSSYT--YSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKV 926
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
D+ E D + +W+ ++S Y + L DM N+ +
Sbjct: 927 FDEMPERDDI-AWTTMVSAY------RRVL----DMDSANSLANQMS------------- 962
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
+ + +N L+ Y G L + LF + ++SW +
Sbjct: 963 ----------------EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKG 1006
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
Y Q+ EA+ +F +M+ GI P+E ++S +++ACA L D
Sbjct: 1007 YSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLD 1066
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
+ +ALVDMYSK G +E A+ VF + ++ WN++I G H AL + +M+
Sbjct: 1067 VYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEM 1126
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLI---KIDTDSDFFVAVGLIDMYSKCEM 403
PN T S AC G D GR+++ +I I ++ + + G++ ++SK +
Sbjct: 1127 ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY--GGMVHLFSKAGL 1184
Query: 404 LSDA 407
+ +A
Sbjct: 1185 IYEA 1188
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 160/376 (42%), Gaps = 45/376 (11%)
Query: 44 SFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
S + P + ++ QC K L + A +I+ + D N ++ + R A
Sbjct: 768 SLSLAPPNLKKIIKQCSTPKLLESAL---AAMIKTSLNQDCRLMNQFITACTSFKRLDLA 824
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
+ Q E +V V ++AL G+V +L + M V + +T+ S++KA S
Sbjct: 825 VSTMTQMQEPNVFV-YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF 883
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNAL 223
+ H GF + TL+ Y+ G++ ++RK+F + ++W +
Sbjct: 884 ASRFGESLQAHIWKFGFGFHVK--IQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTM 941
Query: 224 FSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXX 283
S Y + A L +M
Sbjct: 942 VSAYRRVLDMDSANSLANQM---------------------------------------S 962
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNE 343
++ ++N L++ Y G +E A ++F ++ DI+SW +I G Q++ A+A+ +
Sbjct: 963 EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 344 MKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEM 403
M G P+ T+S+ + ACA +G ++G+++H ++ D ++ L+DMYSKC
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 404 LSDARRVYELMPKKDI 419
L A V+ +PKK++
Sbjct: 1083 LERALLVFFNLPKKNL 1098
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 7/249 (2%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N L++ Y G A L +Q D++ SW+ +I GY QN +EA+ F M G+
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDII-SWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+E T +V+ AC+ L +G++VH ++ GF D ++ + LV MY+KCG L +
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL 265
+F ++ ++ WN++ F EA+ +F +M ++PN + + AC AGL
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 266 RN-GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNA 323
+ G + + +V ++SK G I A+ + + P+ V W A
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHY--GGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGA 1206
Query: 324 VIAGCVQHE 332
++ GC H+
Sbjct: 1207 LLDGCRIHK 1215
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 12/202 (5%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ + ++S C L +G E+H + ++ GF D + LV +YSKCG A LV
Sbjct: 1033 VTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL-LVFF 1091
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ + W+++I G +GF +EAL F M M VK N TF SV AC+ ++
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 1151
Query: 170 GRKVH-----GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNAL 223
GR+++ S+V+ + G +V +++K G + ++ +L G++ P+ V W AL
Sbjct: 1152 GRRIYRSMIDDYSIVSNVEHYG----GMVHLFSKAGLIYEALELIGNMEFEPNAVIWGAL 1207
Query: 224 FS-CYVQSDFCVEAVDLFKEMV 244
C + + + + K MV
Sbjct: 1208 LDGCRIHKNLVIAEIAFNKLMV 1229
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 19/267 (7%)
Query: 157 VLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPS 216
++K CS K L + T + D + N + +L + + P+
Sbjct: 779 IIKQCSTPKLL---ESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 835
Query: 217 VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA-GLRNGSXXXXXX 275
V +NALF +V + +++L+ M+R + P+ ++ S ++ A + R G
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHI 895
Query: 276 XXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECND 335
Q L+D YS GRI A VF+E+ D ++W +++ + D
Sbjct: 896 WKFGFGFHVKIQ---TTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMD 952
Query: 336 WALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG--RQLHSCLIKIDTDSDFFVAVG 393
A +L N+M + A C G+ LG Q S ++ D
Sbjct: 953 SANSLANQMSEK---------NEATSNCLINGYMGLGNLEQAESLFNQMPV-KDIISWTT 1002
Query: 394 LIDMYSKCEMLSDARRVYELMPKKDII 420
+I YS+ + +A V+ M ++ II
Sbjct: 1003 MIKGYSQNKRYREAIAVFYKMMEEGII 1029
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 165/391 (42%), Gaps = 66/391 (16%)
Query: 95 SKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTF 154
+K GR AR++ D E D V +W+ +++ Y + G +EA+ F + K ++++F
Sbjct: 15 AKSGRIASARQVFDGMPELDTV-AWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSF 73
Query: 155 PSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA 214
++L C+ ++ GRK+ + + +GF + V N+L+ MY KC + K+F +
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 215 PS--VVSWNALFSCYVQSDFCVEAVD-------------------------------LFK 241
S V+W +L Y+ ++ A+D LFK
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 242 EMVRGGIRPNEFSLSIILNACAG---------------LRNGSXXXXX------------ 274
EM+ +P+ ++ S ++NAC+ L+NG
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 275 -----XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCV 329
Q S N+++D K G E A+ VF +IV+W +I G
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 330 QHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFF 389
++ + AL EM SG + F + L AC+ + G+ +H CLI +
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 390 VAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
V L+++Y+KC + +A R + + KD++
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIANKDLV 404
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 166/385 (43%), Gaps = 62/385 (16%)
Query: 5 TLRFSYINSLSFK---------PQTIHTTSRTIVDSQTNVVSNSQCFQSFT-------KP 48
+L F+Y+N+ F+ P+ + ++ + C F KP
Sbjct: 143 SLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKP 202
Query: 49 P-ISYTNLLSQCVA-SKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCG-RFGYARK 105
++++L++ C A S ++ G +HA +++ G+S +N ++S Y+K G R R+
Sbjct: 203 DCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRE 262
Query: 106 LVDQSTETDV-----------------------------VVSWSALISGYVQNGFGKEAL 136
L T V +V+W+ +I+GY +NG G++AL
Sbjct: 263 LESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQAL 322
Query: 137 LAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMY 196
F +M GV + F + +VL ACS L G+ +HG + GF +V N LV +Y
Sbjct: 323 RFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLY 382
Query: 197 AKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
AKCG + ++ + FG I +VSWN + + +A+ L+ M+ GI+P+ +
Sbjct: 383 AKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFI 442
Query: 257 IILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
+L C +GL G D + ++DM+ +GG + A +
Sbjct: 443 GLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVT--CMIDMFGRGGHLAEAKDL--AT 498
Query: 314 THPDIV-------SWNAVIAGCVQH 331
T+ +V SW ++ C H
Sbjct: 499 TYSSLVTDSSNNSSWETLLGACSTH 523
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 179/425 (42%), Gaps = 69/425 (16%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLV--- 107
S+T +LS C + ++ G ++ + +IR GF N L+ +Y KC A K+
Sbjct: 72 SFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDM 131
Query: 108 --DQSTET-------------------DVVV--------SWSALISGYVQNGFGKEALLA 138
D E DV V +W+ +ISG+ G + L
Sbjct: 132 CCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSL 191
Query: 139 FNDMCMLGVKCNEFTFPSVLKACSI-KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYA 197
F +M K + +TF S++ ACS ++ GR VH + + G+ S N+++ Y
Sbjct: 192 FKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYT 251
Query: 198 KCGQLGDSRKLFGSI-----------------------------VAP--SVVSWNALFSC 226
K G D+ + SI +AP ++V+W + +
Sbjct: 252 KLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITG 311
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
Y ++ +A+ F EM++ G+ + F+ +L+AC+GL
Sbjct: 312 YGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY 371
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
+ NALV++Y+K G I+ A F +I + D+VSWN ++ H D AL L + M +
Sbjct: 372 AYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIA 431
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEM 403
SG P+ T L C+ G + G + ++K I + D +IDM+ +
Sbjct: 432 SGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTC--MIDMFGRGGH 489
Query: 404 LSDAR 408
L++A+
Sbjct: 490 LAEAK 494
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 178/397 (44%), Gaps = 43/397 (10%)
Query: 61 ASKSLTLGMELHAHLIRFG-FSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSW 119
AS L+ ++H H+I G S N LV Y + G FG A K+ + DV S+
Sbjct: 142 ASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS-SF 200
Query: 120 SALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVV 179
+ +I GY + GF EAL + M G++ +E+T S+L C D+ +G+ VHG
Sbjct: 201 NVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIER 260
Query: 180 TG--FDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ-SDF-CVE 235
G + S+ ++N L+ MY KC + G +++ F ++ + SWN + +V+ D +
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQ 320
Query: 236 AV------------------------------DLFKEM-VRGGIRPNEFSLSIILNACAG 264
AV +LF EM + ++P+ ++ +++ A
Sbjct: 321 AVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 265 LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAV 324
S D F ++AL+DMY K G IE A VF+ T D+ W ++
Sbjct: 381 NGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSM 440
Query: 325 IAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL---IK 381
I G H AL L M+ G PN T+ + L AC+ G + G + + +
Sbjct: 441 ITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFG 500
Query: 382 IDTDSDFFVAVGLIDMYSKCEMLSDARR-VYELMPKK 417
D +++ + + L+D+ + + +A+ V + MP +
Sbjct: 501 FDPETEHYGS--LVDLLCRAGRVEEAKDIVQKKMPMR 535
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 145/318 (45%), Gaps = 41/318 (12%)
Query: 139 FNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG-FVANTLVVMYA 197
++ M V + TF ++KA S ++ +++H +V+G S G ++ N+LV Y
Sbjct: 121 YSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYM 177
Query: 198 KCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSI 257
+ G G + K+F + P V S+N + Y + F +EA+ L+ +MV GI P+E+++
Sbjct: 178 ELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLS 237
Query: 258 ILNACAGL---RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKG-------------- 300
+L C L R G + +NAL+DMY K
Sbjct: 238 LLVCCGHLSDIRLGK-GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMK 296
Query: 301 -----------------GRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL-ALLN 342
G +E A AVF+++ D+VSWN+++ G + C+ + L
Sbjct: 297 KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFY 356
Query: 343 EMK-SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
EM P+ T+ S + A G GR +H +I++ D F++ LIDMY KC
Sbjct: 357 EMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKC 416
Query: 402 EMLSDARRVYELMPKKDI 419
++ A V++ +KD+
Sbjct: 417 GIIERAFMVFKTATEKDV 434
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 140/341 (41%), Gaps = 51/341 (14%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFG--FSHDPSFRNHLVSLYSKCGRFGYAR 104
P YT +LL C + LG +H + R G +S + N L+ +Y KC G A+
Sbjct: 230 PDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAK 289
Query: 105 KLVDQSTETDV------------------------------VVSWSALISGYVQNGFGKE 134
+ D + D+ +VSW++L+ GY + G +
Sbjct: 290 RAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQR 349
Query: 135 ALLA-FNDMCML-GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTL 192
+ F +M ++ VK + T S++ + +L+ GR VHG+ + D F+++ L
Sbjct: 350 TVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSAL 409
Query: 193 VVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNE 252
+ MY KCG + + +F + V W ++ + +A+ LF M G+ PN
Sbjct: 410 IDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNN 469
Query: 253 FSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN-------ALVDMYSKGGRIEN 305
+L +L AC S D+F + +LVD+ + GR+E
Sbjct: 470 VTLLAVLTAC------SHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEE 523
Query: 306 AVAVFEE--ITHPDIVSWNAVIAGCVQHECNDWALALLNEM 344
A + ++ P W ++++ C E + A L E+
Sbjct: 524 AKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTEL 564
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
P+V +N + S S E L+ M+R + P+ + ++ A + L
Sbjct: 98 PNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFL--SEVKQIH 153
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECN 334
+ N+LV Y + G A VF + HPD+ S+N +I G + +
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFS 213
Query: 335 DWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDT--DSDFFVAV 392
AL L +M S G P+ +T+ S L C + LG+ +H + + S+ ++
Sbjct: 214 LEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSN 273
Query: 393 GLIDMYSKCEMLSDARRVYELMPKKDI 419
L+DMY KC+ A+R ++ M KKD+
Sbjct: 274 ALLDMYFKCKESGLAKRAFDAMKKKDM 300
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 159/357 (44%), Gaps = 38/357 (10%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV 115
L + + S + G ++HA +I+ GF D + L+ L+ KCG YAR++ D+ +
Sbjct: 41 LQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKP-T 99
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL-----NMG 170
+ +++ +ISGY+++G KE LL M G K + +T VLKA + + ++
Sbjct: 100 LSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLC 159
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
R VH + + D + LV Y K G+L +R +F ++ +VV ++ S Y+
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQ 219
Query: 231 DFCVEA--------------------------------VDLFKEMVRGGIRPNEFSLSII 258
F +A VD++ M R G PN + + +
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 259 LNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDI 318
+ AC+ L + ++L+DMY+K G I +A VF+++ ++
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQL 375
SW ++I G ++ + AL L MK PN T AL AC+ G D G ++
Sbjct: 340 FSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEI 396
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 37/287 (12%)
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
G+K+H + TGF D ++ L++++ KCG L +R++F + P++ ++N + S Y++
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG-----LRNGSXXXXXXXXXXXXXXX 284
E + L + M G + + ++LS++L A + S
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEITHP---------------------------- 316
D ALVD Y K G++E+A VFE +
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 317 ---DIVSWNAVIAGCVQH-ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
DIV +NA++ G + E ++ + M+ +G PN+ T +S + AC+ + ++G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 373 RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+Q+H+ ++K + + L+DMY+KC ++DARRV++ M +K++
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 39/297 (13%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
+HA +I+ D LV Y K G+ AR + + + +VV +++ISGY+ G
Sbjct: 162 VHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCC-TSMISGYMNQG 220
Query: 131 FGKEALLAFN--------------------------------DMCMLGVKCNEFTFPSVL 158
F ++A FN M G N TF SV+
Sbjct: 221 FVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVI 280
Query: 159 KACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVV 218
ACS+ +G++VH + +G + + ++L+ MYAKCG + D+R++F + +V
Sbjct: 281 GACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVF 340
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRN-GSXXXXXX 275
SW ++ Y ++ EA++LF M I PN + L+AC +GL + G
Sbjct: 341 SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM 400
Query: 276 XXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH-PDIVSWNAVIAGCVQH 331
+ ++ +VD+ + G + A + PD W A+++ C H
Sbjct: 401 QRDYSMKPKMEHYA--CIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLH 455
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 48 PPIS-YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P IS + +++ C S +G ++HA +++ G + L+ +Y+KCG AR++
Sbjct: 271 PNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRV 330
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
DQ E + V SW+++I GY +NG +EAL F M ++ N TF L ACS
Sbjct: 331 FDQMQEKN-VFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACS 385
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
L+ ++ K G + A VF+E+ P + ++N +I+G ++H L L+ M SG +
Sbjct: 75 LLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKAD 134
Query: 353 VFTISSALKACAAVGF-----KDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
+T+S LKA + G + L R +H+ +IK D + D + L+D Y K L A
Sbjct: 135 GYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESA 194
Query: 408 RRVYELMPKKDII 420
R V+E M ++++
Sbjct: 195 RTVFETMKDENVV 207
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 116/230 (50%)
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI 248
+N L+ Y + G L ++RK+F + + +WNA+ + +Q +F E + LF+EM G
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 249 RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVA 308
P+E++L + + AGLR+ S D ++L MY + G++++
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 309 VFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGF 368
V + ++V+WN +I G Q+ C + L L MK SG PN T + L +C+ +
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 369 KDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
+ G+Q+H+ IKI S V LI MYSKC L DA + + +D
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDED 257
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 159/337 (47%), Gaps = 6/337 (1%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N L++ Y + G ARK+ D+ + + +W+A+I+G +Q F +E L F +M LG
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLT-TWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+E+T SV + + +++G+++HG ++ G + D V ++L MY + G+L D
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAV-DLFKEMVRGGIRPNEFSLSIILNACAGLR 266
+ S+ ++V+WN L Q+ C E V L+K M G RPN+ + +L++C+ L
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
++L+ MYSK G + +A F E D V W+++I+
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 266
Query: 327 GCVQHECNDWALALLNEM-KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI-KIDT 384
H D A+ L N M + + N + L AC+ G KD G +L ++ K
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326
Query: 385 DSDFFVAVGLIDMYSKCEMLSDARRVYELMP-KKDII 420
++D+ + L A + MP K DI+
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIV 363
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 145/303 (47%), Gaps = 10/303 (3%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P YT ++ S +S+++G ++H + I++G D + L +Y + G+ ++
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDG-EI 147
Query: 107 VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
V +S +V+W+ LI G QNG + L + M + G + N+ TF +VL +CS
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
G+++H ++ G S V ++L+ MY+KCG LGD+ K F V W+++ S
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267
Query: 227 YVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSIILNAC--AGLRN-GSXXXXXXXXXXXXX 282
Y EA++LF M + + NE + +L AC +GL++ G
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDWALALL 341
++ +VD+ + G ++ A A+ + DIV W +++ C H+ + A +
Sbjct: 328 PGLKHYT--CVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF 385
Query: 342 NEM 344
E+
Sbjct: 386 KEI 388
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
S+N L++ Y + G + NA VF+E+ + +WNA+IAG +Q E N+ L+L EM
Sbjct: 26 MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGL 85
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
G P+ +T+ S A + +G+Q+H IK + D V L MY + L D
Sbjct: 86 GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDG 145
Query: 408 RRVYELMPKKDII 420
V MP ++++
Sbjct: 146 EIVIRSMPVRNLV 158
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 8/214 (3%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I++ +LS C G ++HA I+ G S + + L+S+YSKCG G A K +
Sbjct: 193 ITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE 252
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMC-MLGVKCNEFTFPSVLKACSIKKDLN 168
+ D V+ WS++IS Y +G G EA+ FN M ++ NE F ++L ACS +
Sbjct: 253 REDEDEVM-WSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 311
Query: 169 MGRKVHGMSVVTGFDSDGFVANTLVV-MYAKCGQLGDSRKLFGSI-VAPSVVSWNALFS- 225
G ++ M V G T VV + + G L + + S+ + +V W L S
Sbjct: 312 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
C + + + A +FKE+++ I PN+ + ++L
Sbjct: 372 CNIHKNAEM-AQRVFKEILQ--IDPNDSACYVLL 402
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 119/254 (46%), Gaps = 7/254 (2%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N ++ + + G AR++ D + D +W +I Y + GF EAL F M GV
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNA-TWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+ + + S+L C+ L GR+VH V FD D +VA+ L+ MY KCG+L ++
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA---G 264
+F + ++ WN++ S Y EA+ +F EM G PN+ +L IL AC+
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 265 LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNA 323
L G + +S VDM + G+++ A+ + E +T PD W A
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCT--VDMLGRAGQVDKAMELIESMTIKPDATVWGA 505
Query: 324 VIAGCVQHECNDWA 337
++ C H D A
Sbjct: 506 LLGACKTHSRLDLA 519
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 141/309 (45%), Gaps = 32/309 (10%)
Query: 98 GRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSV 157
GR ARKL D DVV S + +I G + G EA L F++M + N T+ ++
Sbjct: 155 GRIDKARKLYDMMPVKDVVAS-TNMIGGLCREGRVDEARLIFDEM----RERNVVTWTTM 209
Query: 158 LKACSIKKDLNMGRK----------VHGMSVVTGFDSDGFVA-----------------N 190
+ +++ RK V S++ G+ G + N
Sbjct: 210 ITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACN 269
Query: 191 TLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
++V + + G++ +R++F + +W + Y + F +EA+DLF +M + G+RP
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
+ SL IL+ CA L + D + A+ L+ MY K G + A VF
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVF 389
Query: 311 EEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD 370
+ + DI+ WN++I+G H + AL + +EM SSG PN T+ + L AC+ G +
Sbjct: 390 DRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLE 449
Query: 371 LGRQLHSCL 379
G ++ +
Sbjct: 450 EGLEIFESM 458
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 145/333 (43%), Gaps = 17/333 (5%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N LVS Y K AR + + E +VV SW+A++ GY+Q G EA F M
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVV-SWTAMVKGYMQEGMVGEAESLFWRMP---- 137
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+ NE ++ + ++ RK++ M V D + ++ + G++ ++R
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPV----KDVVASTNMIGGLCREGRVDEARL 193
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRN 267
+F + +VV+W + + Y Q++ A LF+ M P + +S +
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM------PEKTEVSWTSMLLGYTLS 247
Query: 268 GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAG 327
G + NA++ + + G I A VF+ + D +W +I
Sbjct: 248 GRIEDAEEFFEVMPMKPV--IACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 328 CVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSD 387
+ AL L +M+ G P+ ++ S L CA + GRQ+H+ L++ D D
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD 365
Query: 388 FFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+VA L+ MY KC L A+ V++ KDII
Sbjct: 366 VYVASVLMTMYVKCGELVKAKLVFDRFSSKDII 398
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
S ++LS C SL G ++HAHL+R F D + L+++Y KCG A+ + D+
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ D+++ W+++ISGY +G G+EAL F++M G N+ T ++L ACS G
Sbjct: 393 SSKDIIM-WNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYA-----G 446
Query: 171 RKVHGMSVVTGFDSDGFVANTL------VVMYAKCGQLGDSRKLFGSI-VAPSVVSWNAL 223
+ G+ + +S V T+ V M + GQ+ + +L S+ + P W AL
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGAL 506
Query: 224 F-SCYVQS 230
+C S
Sbjct: 507 LGACKTHS 514
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 133/337 (39%), Gaps = 74/337 (21%)
Query: 91 VSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCN 150
+S S+ G+ ARK D S + + SW++++SGY NG KEA F++M V
Sbjct: 24 ISRLSRIGKINEARKFFD-SLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV--- 79
Query: 151 EFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFG 210
V +V+ G++ N ++V ++R +F
Sbjct: 80 ----------------------VSWNGLVS-----GYIKNRMIV---------EARNVFE 103
Query: 211 SIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSX 270
+ +VVSW A+ Y+Q EA LF M NE S +++ GL +
Sbjct: 104 LMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMF---GGLIDDG- 155
Query: 271 XXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQ 330
D ++ ++ + GR++ A +F+E+ ++V+W +I G Q
Sbjct: 156 RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ 215
Query: 331 HECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFV 390
+ D A L M P +S +G+ GR I+ +FF
Sbjct: 216 NNRVDVARKLFEVM------PEKTEVSW---TSMLLGYTLSGR--------IEDAEEFFE 258
Query: 391 AV---------GLIDMYSKCEMLSDARRVYELMPKKD 418
+ +I + + +S ARRV++LM +D
Sbjct: 259 VMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRD 295
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 134/276 (48%), Gaps = 16/276 (5%)
Query: 152 FTFPSVLKACSIKKDLNMGRKVHGMSVVTG-FDSDGFVANTLVVMYAKCGQLGDSRKLFG 210
F + LKAC ++G+++H V G F SDG V ++ +Y + L D+RK+F
Sbjct: 121 FLIVACLKACF----FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFD 176
Query: 211 SIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA---GLRN 267
I P VV W+ L + YV+ E +++FKEM+ GI P+EFS++ L ACA L
Sbjct: 177 EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQ 236
Query: 268 GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAG 327
G D F ALVDMY+K G IE AV VFE++T ++ SW A+I G
Sbjct: 237 GK--WIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGG 294
Query: 328 CVQHECNDWALALLNEM-KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKID 383
+ A L+ + + G P+ + L ACA GF + GR + + I
Sbjct: 295 YAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGIT 354
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+ + + +D+ + L DA + E MP K +
Sbjct: 355 PKHEHYSCI--VDLMCRAGRLDDALDLIEKMPMKPL 388
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 145/297 (48%), Gaps = 10/297 (3%)
Query: 43 QSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFG-FSHDPSFRNHLVSLYSKCGRFG 101
+ T +++ L+ C+ + ++G ++H +++ G F D + ++ +Y +
Sbjct: 110 EDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLF 169
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
ARK+ D+ + DVV W L++GYV+ G G E L F +M + G++ +EF+ + L AC
Sbjct: 170 DARKVFDEIPQPDVV-KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTAC 228
Query: 162 SIKKDLNMGRKVHG-MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
+ L G+ +H + +SD FV LV MYAKCG + + ++F + +V SW
Sbjct: 229 AQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSW 288
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVR-GGIRPNEFSLSIILNACAG---LRNGSXXXXXXX 276
AL Y + +A + R GI+P+ L +L ACA L G
Sbjct: 289 AALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENME 348
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVS-WNAVIAGCVQHE 332
+ +S +VD+ + GR+++A+ + E++ + S W A++ GC H+
Sbjct: 349 ARYGITPKHEHYS--CIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHK 403
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 145/314 (46%), Gaps = 40/314 (12%)
Query: 49 PISYT-NLLSQ-CVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYS----------- 95
P +YT N L Q C + G+++H IR GF +DP + L+SLY+
Sbjct: 106 PDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKV 165
Query: 96 --------------------KCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEA 135
+CG +ARKL + E D + +W+A+ISGY Q G +EA
Sbjct: 166 FNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI-AWNAMISGYAQVGESREA 224
Query: 136 LLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM 195
L F+ M + GVK N SVL AC+ L+ GR H +A TLV +
Sbjct: 225 LNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDL 284
Query: 196 YAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSL 255
YAKCG + + ++F + +V +W++ + + F + ++LF M + G+ PN +
Sbjct: 285 YAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTF 344
Query: 256 SIILNACAG---LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE 312
+L C+ + G + + LVD+Y++ GR+E+AV++ ++
Sbjct: 345 VSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYG--CLVDLYARAGRLEDAVSIIQQ 402
Query: 313 IT-HPDIVSWNAVI 325
+ P W++++
Sbjct: 403 MPMKPHAAVWSSLL 416
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 166/384 (43%), Gaps = 37/384 (9%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSL--YSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
++HA L G D H V S YA +++D+S E + + +++I +
Sbjct: 24 QIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRS-EKPTLFALNSMIRAHC 82
Query: 128 QNGFGKEALLAFNDMCMLG--VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSD 185
++ +++ + + G +K + +T +++AC+ + G +VHGM++ GFD+D
Sbjct: 83 KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDND 142
Query: 186 GFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVV--------------------------- 218
V L+ +YA+ G L K+F SI P V
Sbjct: 143 PHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPE 202
Query: 219 ----SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
+WNA+ S Y Q EA+++F M G++ N ++ +L+AC L
Sbjct: 203 RDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWA 262
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECN 334
A LVD+Y+K G +E A+ VF + ++ +W++ + G +
Sbjct: 263 HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFG 322
Query: 335 DWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG-RQLHSCLIKIDTDSDFFVAVG 393
+ L L + MK G PN T S L+ C+ VGF D G R S + +
Sbjct: 323 EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGC 382
Query: 394 LIDMYSKCEMLSDARRVYELMPKK 417
L+D+Y++ L DA + + MP K
Sbjct: 383 LVDLYARAGRLEDAVSIIQQMPMK 406
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR------KLFGSIVAPSVVSWNALF 224
R++H V G D + LV + K L D + ++ P++ + N++
Sbjct: 23 RQIHAKLYVDGTLKD----DHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 225 SCYVQSDFCVEAVDLFKEMVRGG--IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
+ +S ++ D ++ ++ G ++P+ ++++ ++ AC GLR
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIV----------------------- 319
D L+ +Y++ G +++ VF I PD V
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 320 --------SWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDL 371
+WNA+I+G Q + AL + + M+ G N + S L AC +G D
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 372 GRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
GR HS + + +A L+D+Y+KC + A V+ M +K++
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 163/382 (42%), Gaps = 52/382 (13%)
Query: 74 HLI-RFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFG 132
HL+ RF +S + + H V L S LV +T V ++ LI Y+ G
Sbjct: 18 HLLQRFLYSSNQIKQIHTVLLTSNA--------LVASRWKTKCV--YNTLIRSYLTTGEY 67
Query: 133 KEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTL 192
K +L F M V+ N TFPS++KA ++ G +HG ++ GF D FV +
Sbjct: 68 KTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSF 127
Query: 193 VVMYAKCGQLGDSRKLFGSIVAP-------------------------------SVVSWN 221
V Y + G L SRK+F I+ P VVSW
Sbjct: 128 VRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWT 187
Query: 222 ALFSCYVQSDFCVEAVDLFKEMV---RGGIRPNEFSLSIILNACAGLRNGSXXXXXXX-- 276
+ + + + +A+ +F EM+ R I PNE + +L++CA G
Sbjct: 188 TVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHG 247
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW 336
AL+DMY K G +E A+ +F++I + +WNA+I+ +
Sbjct: 248 YVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQ 307
Query: 337 ALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKIDTDSDFFVAVG 393
AL + MKSS PN T+ + L ACA DLG QL S + KI S+ + V
Sbjct: 308 ALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCV- 366
Query: 394 LIDMYSKCEMLSDARRVYELMP 415
+D+ + +L DA + +P
Sbjct: 367 -VDLIGRAGLLVDAANFIQSLP 387
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 143/346 (41%), Gaps = 42/346 (12%)
Query: 27 TIVDSQTNVVSNSQCFQSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPS 85
T + +T++ + S +P +++ +L+ +S S++ G+ LH ++ GF DP
Sbjct: 63 TTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPF 122
Query: 86 FRNHLVSLYSKCGRFGYARKLVD------------------------------QSTETDV 115
+ V Y + G +RK+ D Q
Sbjct: 123 VQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTD 182
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCM---LGVKCNEFTFPSVLKACS--IKKDLNMG 170
VVSW+ +I+G+ + G +AL+ F +M + NE TF SVL +C+ + + +G
Sbjct: 183 VVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLG 242
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQS 230
+++HG + + L+ MY K G L + +F I V +WNA+ S +
Sbjct: 243 KQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASN 302
Query: 231 DFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR---NGSXXXXXXXXXXXXXXXXDQ 287
+A+++F+ M + PN +L IL ACA + G +
Sbjct: 303 GRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEH 362
Query: 288 FSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHE 332
+ +VD+ + G + +A + + PD A++ C HE
Sbjct: 363 Y--GCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHE 406
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 172/357 (48%), Gaps = 11/357 (3%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
+H ++ G D + + L++ Y + G + L D+ E DV+V W+++I+ QNG
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIV-WNSMITALNQNG 167
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK---VHGMSVVTGFDSDGF 187
A+ F +M G NEF ++L A S L++ RK +H +++ TG D
Sbjct: 168 RYIAAVGLFIEMIHKG---NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSS 224
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
+ N L+ +YAK L + +F + +VSWN + + + + +++ FK M G
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG 284
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA--NALVDMYSKGGRIEN 305
+ + S +++AC+ + + + + N+++ MYSK G E
Sbjct: 285 QEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEA 344
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC-PNVFTISSALKACA 364
A VFEE+ D++S NA++ G + + A +LN+M+S P++ T+ S C
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG 404
Query: 365 AVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYELMPKKDII 420
+ F GR +H ++++ S + +IDMY KC + + A +++ +D++
Sbjct: 405 DLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLV 461
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 183/397 (46%), Gaps = 41/397 (10%)
Query: 40 QCFQSFT-----KPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDP--SFRNHLVS 92
Q F+S T ++++ ++S C + + LTLG LH +I+ G+S + S N ++S
Sbjct: 275 QYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIIS 334
Query: 93 LYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEF 152
+YSKCG A + ++ DV+ S +A+++G+ NG +EA N M V +
Sbjct: 335 MYSKCGDTEAAETVFEELVCRDVISS-NAILNGFAANGMFEEAFGILNQ--MQSVDKIQP 391
Query: 153 TFPSVLKACSIKKDLNM---GRKVHGMSVVTGFDSDGF-VANTLVVMYAKCGQLGDSRKL 208
+V+ SI DL+ GR VHG +V S V N+++ MY KCG + L
Sbjct: 392 DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 209 FGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSI---ILNACAGL 265
F + +VSWN++ S + Q+ F +A +LFKE+V ++FSLS IL +C
Sbjct: 452 FKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV-SEYSCSKFSLSTVLAILTSC--- 507
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMY-SKGGRIENAVAVFEEITHP-DIVSWNA 323
D V + K G + +A E ++ D+ SWN+
Sbjct: 508 -----------------DSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNS 550
Query: 324 VIAGCVQHECNDWALALLNEMKSSGACP-NVFTISSALKACAAVGFKDLGRQLHSCLIKI 382
VI+GC + +L M G ++ T+ + A +G GR H IK
Sbjct: 551 VISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKS 610
Query: 383 DTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+ D + LI MY +C+ + A +V+ L+ ++
Sbjct: 611 LRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNL 647
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 155/328 (47%), Gaps = 12/328 (3%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNG 130
LH I G D S N L++LY+K A + D+V SW+ +++ + NG
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIV-SWNTIMTKCLANG 268
Query: 131 FGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA- 189
+++L F M G + + TF V+ ACS ++L +G +HG+ + +G+ + V+
Sbjct: 269 HPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSV 328
Query: 190 -NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR-GG 247
N+++ MY+KCG + +F +V V+S NA+ + + + EA + +M
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDK 388
Query: 248 IRPNEFSLSIILNACAGL---RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
I+P+ ++ I + C L R G + N+++DMY K G
Sbjct: 389 IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVI--NSVIDMYGKCGLTT 446
Query: 305 NAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP--NVFTISSALKA 362
A +F+ TH D+VSWN++I+ Q+ A L E+ S +C ++ T+ + L +
Sbjct: 447 QAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTS 506
Query: 363 CAAVGFKDLGRQLHSCLIKI-DTDSDFF 389
C + G+ +H L K+ D S F
Sbjct: 507 CDSSDSLIFGKSVHCWLQKLGDLTSAFL 534
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 146/320 (45%), Gaps = 24/320 (7%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
+L+ C +S SL G +H L + G L S + + ++ +ET
Sbjct: 503 ILTSCDSSDSLIFGKSVHCWLQKLG---------DLTSAFLR----------LETMSETR 543
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKACSIKKDLNMGRKV 173
+ SW+++ISG +G E+L AF M G ++ + T + A + GR
Sbjct: 544 DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCF 603
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFC 233
HG+++ + + D + NTL+ MY +C + + K+FG I P++ SWN + S Q+
Sbjct: 604 HGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAG 663
Query: 234 VEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANAL 293
E LF+ + + PNE + +L+A L + S + F + AL
Sbjct: 664 REVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAAL 720
Query: 294 VDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC-PN 352
VDMYS G +E + VF I +WN+VI+ H + A+ L E+ S+ PN
Sbjct: 721 VDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPN 780
Query: 353 VFTISSALKACAAVGFKDLG 372
+ S L AC+ GF D G
Sbjct: 781 KSSFISLLSACSHSGFIDEG 800
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 150/349 (42%), Gaps = 28/349 (8%)
Query: 68 GMELHAHLIRFGF-SHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGY 126
G +H + +R S N ++ +Y KCG A L +T D+V SW+++IS +
Sbjct: 412 GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLV-SWNSMISAF 470
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVL---KACSIKKDLNMGRKVHGMSVVTGFD 183
QNGF +A F ++ + C++F+ +VL +C L G+ VH G
Sbjct: 471 SQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG-- 527
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
L + + + ++R L SWN++ S S +E++ F+ M
Sbjct: 528 -------DLTSAFLRLETMSETRDL---------TSWNSVISGCASSGHHLESLRAFQAM 571
Query: 244 VR-GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
R G IR + +L ++A L D N L+ MY +
Sbjct: 572 SREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKD 631
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
IE+AV VF I+ P++ SWN VI+ Q++ L +K PN T L A
Sbjct: 632 IESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSA 688
Query: 363 CAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
+G G Q H LI+ ++ FV+ L+DMYS C ML +V+
Sbjct: 689 STQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVF 737
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 2/266 (0%)
Query: 157 VLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPS 216
VL++ ++ + R VH ++ G D ++ L+ Y + G+L S LF +
Sbjct: 93 VLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKD 152
Query: 217 VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXX 276
V+ WN++ + Q+ + AV LF EM+ G + +L + +A + L
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW 336
D NAL+++Y+KG + +A VF + H DIVSWN ++ C+ +
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 337 ALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG--L 394
+L M SG + T S + AC+++ LG LH +IK + V+VG +
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 395 IDMYSKCEMLSDARRVYELMPKKDII 420
I MYSKC A V+E + +D+I
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVI 358
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 22/289 (7%)
Query: 55 LLSQCVASKSLTLGME---LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
LL AS +L L ++ H I+ D +N L+++Y +C A K+ +
Sbjct: 584 LLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLIS 643
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
+ ++ SW+ +IS QN G+E F + L ++ NE TF +L A + + G
Sbjct: 644 DPNLC-SWNCVISALSQNKAGREVFQLFRN---LKLEPNEITFVGLLSASTQLGSTSYGM 699
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
+ H + GF ++ FV+ LV MY+ CG L K+F + S+ +WN++ S +
Sbjct: 700 QAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHG 759
Query: 232 FCVEAVDLFKEMVRGG-IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
+A++LFKE+ + PN+ S +L+AC S ++F
Sbjct: 760 MGEKAMELFKELSSNSEMEPNKSSFISLLSAC------SHSGFIDEGLSYYKQMEEKFGV 813
Query: 291 NA-------LVDMYSKGGRIENAVAVFEEITHPDIVS-WNAVIAGCVQH 331
+VDM + G++ A I P W A+++ C H
Sbjct: 814 KPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYH 862
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 40 QCFQSFTKPP--ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKC 97
Q F++ P I++ LLS S + GM+ H HLIR GF +P LV +YS C
Sbjct: 668 QLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSC 727
Query: 98 GRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VKCNEFTFPS 156
G K V +++ + + +W+++IS + +G G++A+ F ++ ++ N+ +F S
Sbjct: 728 GMLETGMK-VFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFIS 786
Query: 157 VLKACSIKKDLNMGRKVHG-MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP 215
+L ACS ++ G + M G +V M + G+L ++ + I P
Sbjct: 787 LLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEP 846
Query: 216 SVVS-WNALFS 225
W AL S
Sbjct: 847 QKAGVWGALLS 857
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 163/337 (48%), Gaps = 13/337 (3%)
Query: 95 SKCGRFGYARKL-----VDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
+KC G+ + + + + ++ +I GYV +EAL +N+M G +
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEP 130
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
+ FT+P +LKAC+ K + G+++HG G ++D FV N+L+ MY +CG++ S +F
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSIILNACAGLRNG 268
+ + + SW+++ S E + LF+ M ++ E + L ACA
Sbjct: 191 EKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGAL 250
Query: 269 SXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGC 328
+ + +LVDMY K G ++ A+ +F+++ + ++++A+I+G
Sbjct: 251 NLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGL 310
Query: 329 VQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI---KIDTD 385
H + AL + ++M G P+ S L AC+ G GR++ + ++ K++
Sbjct: 311 ALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPT 370
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELMP--KKDII 420
++ + L+D+ + +L +A + +P K D+I
Sbjct: 371 AEHYGC--LVDLLGRAGLLEEALETIQSIPIEKNDVI 405
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 16/315 (5%)
Query: 27 TIVDSQTNVVSNSQ--CF-----QSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRF 78
T++ NV+S + CF Q +P +Y LL C KS+ G ++H + +
Sbjct: 102 TMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKL 161
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLA 138
G D +N L+++Y +CG + + ++ E+ SWS+++S G E LL
Sbjct: 162 GLEADVFVQNSLINMYGRCGEMELSSAVFEK-LESKTAASWSSMVSARAGMGMWSECLLL 220
Query: 139 FNDMC-MLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYA 197
F MC +K E S L AC+ LN+G +HG + + + V +LV MY
Sbjct: 221 FRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYV 280
Query: 198 KCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSI 257
KCG L + +F + + ++++A+ S A+ +F +M++ G+ P+
Sbjct: 281 KCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVS 340
Query: 258 ILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT 314
+LNAC +GL + G + + LVD+ + G +E A+ + I
Sbjct: 341 VLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG--CLVDLLGRAGLLEEALETIQSIP 398
Query: 315 -HPDIVSWNAVIAGC 328
+ V W ++ C
Sbjct: 399 IEKNDVIWRTFLSQC 413
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 157/367 (42%), Gaps = 41/367 (11%)
Query: 83 DPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDM 142
D RN +++ Y + G A + ++ E + +SW+ LI+GY QNG+ +EAL M
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM 251
Query: 143 CMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQL 202
G+K +E +F +VL S K L +G++VH + G S+ FV++ +V +Y KCG +
Sbjct: 252 EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNM 311
Query: 203 G-------------------------------DSRKLFGSIVAPSVVSWNALFSCYV--- 228
++++LF S+ ++V W A+F Y+
Sbjct: 312 KYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLR 371
Query: 229 QSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQF 288
Q D +E F + P+ + +L AC+ D+
Sbjct: 372 QPDSVLELARAF--IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKK 429
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
A VDMYSK G +E A +F+ D V +NA+IAGC H + +M G
Sbjct: 430 LVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGG 489
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLS 405
P+ T + L AC G G + +I+ I ++ + +ID+Y K L
Sbjct: 490 FKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTC--MIDLYGKAYRLD 547
Query: 406 DARRVYE 412
A + E
Sbjct: 548 KAIELME 554
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 186/460 (40%), Gaps = 103/460 (22%)
Query: 63 KSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSAL 122
K L G H I+ G + N LV+LYSK G AR + D+ E +V SW+A+
Sbjct: 2 KCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVY-SWNAV 60
Query: 123 ISGYVQNGFGKEA------------LLAFN---------DMC------MLG--------- 146
I+ YV+ KEA L+ +N D C M G
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+ ++FT +++K + ++ G ++HG+ V TG D F ++L+ MY+KCG+ +
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 207 KLF-GSIV-----------------------APSV----------VSWNALFSCYVQSDF 232
+F GS V A SV +SWN L + Y Q+ +
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY 240
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
EA+ + M G++ +E S +LN + L++ ++F ++
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG 300
Query: 293 LVDMY-------------------------------SKGGRIENAVAVFEEITHPDIVSW 321
+VD+Y S G++ A +F+ ++ ++V W
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW 360
Query: 322 NAVIAGCVQHECNDWALALLNE-MKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI 380
A+ G + D L L + + P+ + S L AC+ + + G+++H +
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 381 KIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ D + +DMYSKC + A R+++ ++D +
Sbjct: 421 RTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTV 460
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 143/324 (44%), Gaps = 51/324 (15%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA------- 103
S+ +L+ + KSL +G E+HA +++ G + + +V +Y KCG YA
Sbjct: 262 SFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLY 321
Query: 104 ------------------------RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAF 139
++L D +E ++VV W+A+ GY+ N +++L
Sbjct: 322 GFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVV-WTAMFLGYL-NLRQPDSVLEL 379
Query: 140 NDMCMLGVKCNEFTFP------SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLV 193
+ NE P SVL ACS++ + G+++HG S+ TG D + V
Sbjct: 380 ARAFI----ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFV 435
Query: 194 VMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
MY+KCG + + ++F S V +NA+ + ++ F++M GG +P+E
Sbjct: 436 DMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEI 495
Query: 254 SLSIILNACA--GL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
+ +L+AC GL G ++ ++D+Y K R++ A+ +
Sbjct: 496 TFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTC--MIDLYGKAYRLDKAIELM 553
Query: 311 EEITHPDIVSWNAVIAGCVQHECN 334
E I D V +AVI G + C+
Sbjct: 554 EGI---DQVEKDAVILGAFLNACS 574
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 4 TTLRFSYINSLSFKPQTIHTTSRTIVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASK 63
T + Y+N +P ++ +R + ++TN T + ++L C
Sbjct: 361 TAMFLGYLNLR--QPDSVLELARAFIANETN-----------TPDSLVMVSVLGACSLQA 407
Query: 64 SLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALI 123
+ G E+H H +R G D V +YSKCG YA ++ D S E D V+ ++A+I
Sbjct: 408 YMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVM-YNAMI 466
Query: 124 SGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
+G +G ++ F DM G K +E TF ++L AC
Sbjct: 467 AGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSAC 504
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 134/276 (48%), Gaps = 16/276 (5%)
Query: 152 FTFPSVLKACSIKKDLNMGRKVHGMSVVTG-FDSDGFVANTLVVMYAKCGQLGDSRKLFG 210
F + LKAC ++G+++H V G F SD V ++ +Y + L D+RK+F
Sbjct: 121 FLIVACLKACF----FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFD 176
Query: 211 SIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA---GLRN 267
I P VV W+ L + YV+ E +++F+EM+ G+ P+EFS++ L ACA L
Sbjct: 177 EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQ 236
Query: 268 GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAG 327
G D F ALVDMY+K G IE AV VF+++T ++ SW A+I G
Sbjct: 237 GK--WIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGG 294
Query: 328 CVQHECNDWALALLNEM-KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL---IKID 383
+ A+ L + + G P+ + L ACA GF + GR + + +I
Sbjct: 295 YAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEIT 354
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+ + + +D+ + L DA + E MP K +
Sbjct: 355 PKHEHYSCI--VDLMCRAGRLDDALNLIEKMPMKPL 388
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 146/290 (50%), Gaps = 10/290 (3%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFG-FSHDPSFRNHLVSLYSKCGRFGYARKLVD 108
+++ L+ C+ + ++G ++H +++ G F D + ++ +Y + ARK+ D
Sbjct: 117 LTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFD 176
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLN 168
+ + DVV W L++GYV+ G G E L F +M + G++ +EF+ + L AC+ L
Sbjct: 177 EIPQPDVV-KWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALA 235
Query: 169 MGRKVHG-MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
G+ +H + + +SD FV LV MYAKCG + + ++F + +V SW AL Y
Sbjct: 236 QGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGY 295
Query: 228 VQSDFCVEAVDLFKEMVR-GGIRPNEFSLSIILNACAG---LRNGSXXXXXXXXXXXXXX 283
+ +A+ + + R GI+P+ L +L ACA L G
Sbjct: 296 AAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITP 355
Query: 284 XXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVS-WNAVIAGCVQHE 332
+ +S +VD+ + GR+++A+ + E++ + S W A++ GC H+
Sbjct: 356 KHEHYS--CIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHK 403
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 39/310 (12%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL------- 106
+L C A + ++ HA + + G+ PS V+ Y +C R AR+L
Sbjct: 35 QVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSL 94
Query: 107 -------------------------VDQSTETDVVVSWSALISGYVQNGFGKEALLAFND 141
V ++ V++W+ +I GYV+N +EAL A +
Sbjct: 95 SPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKN 154
Query: 142 MC-MLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCG 200
M +K N+F+F S L AC+ DL+ + VH + + +G + + +++ LV +YAKCG
Sbjct: 155 MLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCG 214
Query: 201 QLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
+G SR++F S+ V WNA+ + + EA+ +F EM + P+ + +L
Sbjct: 215 DIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLT 274
Query: 261 ACAG---LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THP 316
C+ L G + + A+VD+ + GR++ A + E + P
Sbjct: 275 TCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY--GAMVDLLGRAGRVKEAYELIESMPIEP 332
Query: 317 DIVSWNAVIA 326
D+V W ++++
Sbjct: 333 DVVIWRSLLS 342
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 6/230 (2%)
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR-GGI 248
N ++ K G+ G ++K+ + +V++WN + YV++ EA+ K M+ I
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 249 RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVA 308
+PN+FS + L ACA L + + ++ALVD+Y+K G I +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 309 VFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGF 368
VF + D+ WNA+I G H A+ + +EM++ P+ T L C+ G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 369 KDLGRQ---LHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+ G++ L S I + + A ++D+ + + +A + E MP
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGA--MVDLLGRAGRVKEAYELIESMP 329
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 291 NALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS-SGA 349
N +++ K G A V + ++++WN +I G V++ + AL L M S +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 350 CPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARR 409
PN F+ +S+L ACA +G + +HS +I + + ++ L+D+Y+KC + +R
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 410 VYELMPKKDI 419
V+ + + D+
Sbjct: 222 VFYSVKRNDV 231
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 139/278 (50%), Gaps = 11/278 (3%)
Query: 146 GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS 205
G + + S +++C + +D G H +++ GF SD ++ ++LVV+Y G++ ++
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 206 RKLFGSIVAPSVVSWNALFSCYVQS---DFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
K+F + +VVSW A+ S + Q D C++ L+ +M + PN+++ + +L+AC
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLK---LYSKMRKSTSDPNDYTFTALLSAC 231
Query: 263 AGLRNGSXXXXXXXXXXXXXXXXDQF--SANALVDMYSKGGRIENAVAVFEEITHPDIVS 320
G +G+ + +N+L+ MY K G +++A +F++ ++ D+VS
Sbjct: 232 TG--SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS 289
Query: 321 WNAVIAGCVQHECNDWALALLN-EMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL 379
WN++IAG QH A+ L M SG P+ T L +C G GR+ + +
Sbjct: 290 WNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM 349
Query: 380 IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+ + L+D+ + +L +A + E MP K
Sbjct: 350 AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMK 387
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 148/308 (48%), Gaps = 12/308 (3%)
Query: 28 IVDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFR 87
+ DS ++V + F ++ ++ + C ++ G H ++ GF D
Sbjct: 104 LEDSSSSVKRDGWSFDAY-----GLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLG 158
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
+ LV LY G A K+ ++ E +VV SW+A+ISG+ Q L ++ M
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVV-SWTAMISGFAQEWRVDICLKLYSKMRKSTS 217
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
N++TF ++L AC+ L GR VH ++ G S ++N+L+ MY KCG L D+ +
Sbjct: 218 DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSIILNAC--AG 264
+F VVSWN++ + Y Q ++A++LF+ M+ + G +P+ + +L++C AG
Sbjct: 278 IFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAG 337
Query: 265 LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNA 323
L + +S LVD+ + G ++ A+ + E + P+ V W +
Sbjct: 338 LVKEGRKFFNLMAEHGLKPELNHYS--CLVDLLGRFGLLQEALELIENMPMKPNSVIWGS 395
Query: 324 VIAGCVQH 331
++ C H
Sbjct: 396 LLFSCRVH 403
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 74/135 (54%)
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
D + ++LV +Y G +ENA VFEE+ ++VSW A+I+G Q D L L ++M+
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 346 SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLS 405
S + PN +T ++ L AC G GR +H + + S ++ LI MY KC L
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 406 DARRVYELMPKKDII 420
DA R+++ KD++
Sbjct: 274 DAFRIFDQFSNKDVV 288
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 16/327 (4%)
Query: 44 SFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA 103
S P+S + L C+ S L G+++H + GF D L+ LYS C A
Sbjct: 108 SLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDA 167
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDM------CMLGVKCNEFTFPSV 157
K+ D+ + D V SW+ L S Y++N ++ L+ F+ M C VK + T
Sbjct: 168 CKVFDEIPKRDTV-SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGC---VKPDGVTCLLA 223
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV 217
L+AC+ L+ G++VH G ++NTLV MY++CG + + ++F + +V
Sbjct: 224 LQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNV 283
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXX 275
VSW AL S + F EA++ F EM++ GI P E +L+ +L+AC +GL
Sbjct: 284 VSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDR 343
Query: 276 XXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH--- 331
+ +VD+ + ++ A ++ + + PD W ++ C H
Sbjct: 344 MRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDV 403
Query: 332 ECNDWALALLNEMKSSGACPNVFTISS 358
E + ++ L E+K+ A V +++
Sbjct: 404 ELGERVISHLIELKAEEAGDYVLLLNT 430
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
N + LK C DL G ++HG GF SD + TL+ +Y+ C D+ K+F
Sbjct: 112 NPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVF 171
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM---VRGGIRPNEFSLSIILNACAGLR 266
I VSWN LFSCY+++ + + LF +M V G ++P+ + + L ACA L
Sbjct: 172 DEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLG 231
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
+N LV MYS+ G ++ A VF + ++VSW A+I+
Sbjct: 232 ALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALIS 291
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR----QLHSCLIKI 382
G + A+ NEM G P T++ L AC+ G G ++ S KI
Sbjct: 292 GLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKI 351
Query: 383 DTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+ + V +D+ + +L A + + M K
Sbjct: 352 KPNLHHYGCV--VDLLGRARLLDKAYSLIKSMEMK 384
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP-NEFSLSIILNACAGL 265
++F + P++ N + + S E LF+ + R P N S S L C
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
+ D L+D+YS +A VF+EI D VSWN +
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 326 AGCVQHECNDWALALLNEMKSS-GAC--PNVFTISSALKACAAVGFKDLGRQLHSCLIKI 382
+ ++++ L L ++MK+ C P+ T AL+ACA +G D G+Q+H + +
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN 246
Query: 383 DTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
++ L+ MYS+C + A +V+ M +++++
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVV 284
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 186/422 (44%), Gaps = 53/422 (12%)
Query: 42 FQSFTKPPISYT-NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGR- 99
F+S + IS T ++L C S + ++H LI+ G + + +V ++ R
Sbjct: 4 FKSTMECSISSTIHVLGSCKTSDDVN---QIHGRLIKTGIIKNSNLTTRIVLAFASSRRP 60
Query: 100 --FGYARKLVDQST-------ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCN 150
+AR + + E + W+A+I + ++ALL M GV +
Sbjct: 61 YLADFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVD 120
Query: 151 EFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFG 210
+F+ VLKACS + G ++HG TG SD F+ N L+ +Y KCG LG SR++F
Sbjct: 121 KFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFD 180
Query: 211 SIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA-CAGLRNGS 269
+ VS+N++ YV+ V A +LF M P E I N+ +G S
Sbjct: 181 RMPKRDSVSYNSMIDGYVKCGLIVSARELFDLM------PMEMKNLISWNSMISGYAQTS 234
Query: 270 XXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVA--------------------- 308
D S N+++D Y K GRIE+A
Sbjct: 235 DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYA 294
Query: 309 ----------VFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEM-KSSGACPNVFTIS 357
+F+++ H D+V++N+++AG VQ++ + AL + ++M K S P+ T+
Sbjct: 295 KLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLV 354
Query: 358 SALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
L A A +G +H +++ + V LIDMYSKC + A V+E + K
Sbjct: 355 IVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 414
Query: 418 DI 419
I
Sbjct: 415 SI 416
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 176/384 (45%), Gaps = 45/384 (11%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYV 127
GM++H L + G D +N L+ LY KCG G +R++ D+ + D V S++++I GYV
Sbjct: 140 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSV-SYNSMIDGYV 198
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLK-----------ACSIKKDLNMGRKVHGM 176
+ G A F+ M M N ++ S++ A + D+ +
Sbjct: 199 KCGLIVSARELFDLMPM--EMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWN 256
Query: 177 SVVTGFDSDGFVAN-----------------TLVVMYAKCGQLGDSRKLFGSIVAPSVVS 219
S++ G+ G + + T++ YAK G + ++ LF + VV+
Sbjct: 257 SMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVA 316
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVR-GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
+N++ + YVQ+ + +EA+++F +M + + P++ +L I+L A A L S
Sbjct: 317 YNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI 376
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL 338
AL+DMYSK G I++A+ VFE I + I WNA+I G H + A
Sbjct: 377 VEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAF 436
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFK-------DLGRQLHSCLIKIDTDSDFFVA 391
+L +++ P+ T L AC+ G +L R+ H KI+ +
Sbjct: 437 DMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKH----KIEPRLQHYGC 492
Query: 392 VGLIDMYSKCEMLSDARRVYELMP 415
++D+ S+ + A+ + E MP
Sbjct: 493 --MVDILSRSGSIELAKNLIEEMP 514
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 133/290 (45%), Gaps = 10/290 (3%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VK 148
++ Y+K G +A+ L DQ DVV +++++++GYVQN + EAL F+DM +
Sbjct: 289 MIDGYAKLGFVHHAKTLFDQMPHRDVV-AYNSMMAGYVQNKYHMEALEIFSDMEKESHLL 347
Query: 149 CNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKL 208
++ T VL A + L+ +H V F G + L+ MY+KCG + + +
Sbjct: 348 PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLV 407
Query: 209 FGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGL- 265
F I S+ WNA+ A D+ ++ R ++P++ + +LNAC +GL
Sbjct: 408 FEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLV 467
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAV 324
+ G + +VD+ S+ G IE A + EE+ P+ V W
Sbjct: 468 KEGLLCFELMRRKHKIEPRLQHY--GCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTF 525
Query: 325 IAGCVQH-ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
+ C H E L + + +G P+ + + S + A + +KD+ R
Sbjct: 526 LTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGM-WKDVRR 574
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 23/287 (8%)
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ--LGD 204
++C+ + VL +C D+N ++HG + TG + + +V+ +A + L D
Sbjct: 8 MECSISSTIHVLGSCKTSDDVN---QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLAD 64
Query: 205 SRKL-----------FGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
+ FG + P + WNA+ + +A+ L M+ G+ ++F
Sbjct: 65 FARCVFHEYHVCSFSFGEVEDPFL--WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKF 122
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
SLS++L AC+ L D F N L+ +Y K G + + +F+ +
Sbjct: 123 SLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRM 182
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
D VS+N++I G V+ A L + M N+ + +S + A G
Sbjct: 183 PKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSD---GV 237
Query: 374 QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ S L + D +ID Y K + DA+ ++++MP++D++
Sbjct: 238 DIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVV 284
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 65 LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALIS 124
L+ +++H +++ F L+ +YSKCG +A LV + E + W+A+I
Sbjct: 366 LSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAM-LVFEGIENKSIDHWNAMIG 424
Query: 125 GYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
G +G G+ A + L +K ++ TF VL ACS
Sbjct: 425 GLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACS 462
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 15/324 (4%)
Query: 101 GYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDM----CMLGVKCNEFTFPS 156
GYARKL DQ + D +++I Y++ ++ + D+ C + FTF +
Sbjct: 27 GYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAP---DNFTFTT 83
Query: 157 VLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPS 216
+ K+CS+ + G ++H GF +D +V+ +V MYAK G++G +R F + S
Sbjct: 84 LTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRS 143
Query: 217 VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXX 276
VSW AL S Y++ A LF +M P+ + +I NA S
Sbjct: 144 EVSWTALISGYIRCGELDLASKLFDQM------PHVKDV-VIYNAMMDGFVKSGDMTSAR 196
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW 336
+ ++ Y I+ A +F+ + ++VSWN +I G Q++
Sbjct: 197 RLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQE 256
Query: 337 ALALLNEMKSSGAC-PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLI 395
+ L EM+++ + P+ TI S L A + G LG H + + D V ++
Sbjct: 257 GIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAIL 316
Query: 396 DMYSKCEMLSDARRVYELMPKKDI 419
DMYSKC + A+R+++ MP+K +
Sbjct: 317 DMYSKCGEIEKAKRIFDEMPEKQV 340
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 164/376 (43%), Gaps = 18/376 (4%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F ++T L C S + G++LH+ + RFGF D +V +Y+K G+ G AR
Sbjct: 74 FAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCAR 133
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
D+ VSW+ALISGY++ G A F+ M + + + +++
Sbjct: 134 NAFDEMPHRS-EVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKS 189
Query: 165 KDLNMGRKVHG----MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSW 220
D+ R++ +V+T T++ Y + +RKLF ++ ++VSW
Sbjct: 190 GDMTSARRLFDEMTHKTVITW--------TTMIHGYCNIKDIDAARKLFDAMPERNLVSW 241
Query: 221 NALFSCYVQSDFCVEAVDLFKEM-VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
N + Y Q+ E + LF+EM + P++ ++ +L A + S
Sbjct: 242 NTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQ 301
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALA 339
A++DMYSK G IE A +F+E+ + SWNA+I G + AL
Sbjct: 302 RKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALD 361
Query: 340 LLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYS 399
L M P+ T+ + + AC G + GR+ + ++ ++ ++D+
Sbjct: 362 LFVTMMIEEK-PDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLG 420
Query: 400 KCEMLSDARRVYELMP 415
+ L +A + MP
Sbjct: 421 RAGSLKEAEDLITNMP 436
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 40 QCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGR 99
Q S ++ ++L + +L+LG H + R ++ +YSKCG
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 100 FGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLK 159
A+++ D+ E V SW+A+I GY NG + AL F M M+ K +E T +V+
Sbjct: 325 IEKAKRIFDEMPEKQ-VASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVIT 382
Query: 160 ACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
AC+ + GRK + G ++ +V + + G L ++ L ++
Sbjct: 383 ACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 174/438 (39%), Gaps = 80/438 (18%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
+L C L H +I+ G + N L++LY K GR G A L + +
Sbjct: 164 ILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRN 223
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLK--------------- 159
+ SW+ +I G+ Q + A+ F M K +E T+ SVL
Sbjct: 224 RM-SWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYF 282
Query: 160 --------------------ACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKC 199
C+ + L++ KVHG + GF+ N L+ +Y K
Sbjct: 283 HLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQ 342
Query: 200 GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM---------------- 243
G++ D+ LF I + SWN+L + +V + EA+ LF E+
Sbjct: 343 GKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTW 402
Query: 244 --------VRG---------------GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXX 280
V+G + N ++ IL+ CA L +
Sbjct: 403 TSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIR 462
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALAL 340
+ NALV+MY+K G + VFE I D++SWN++I G H + AL++
Sbjct: 463 TSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSM 522
Query: 341 LNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDM 397
+ M SSG P+ + + L AC+ G + GR++ + K ++ + + + +D+
Sbjct: 523 FDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACI--VDL 580
Query: 398 YSKCEMLSDARRVYELMP 415
+ L +A + + MP
Sbjct: 581 LGRVGFLKEASEIVKNMP 598
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 181/448 (40%), Gaps = 84/448 (18%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFS-HDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+ +LL C+ ++ ++HA ++ F S +L+S+Y++ G AR + +
Sbjct: 59 FDHLLGLCLTAQQCR---QVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFE-- 113
Query: 111 TETDVVVS----WSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
T + V++S W++++ V +G + AL + M G+ + + P +L+AC
Sbjct: 114 TVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGR 173
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-------------- 212
+ R H + G + V N L+ +Y K G++GD+ LF +
Sbjct: 174 FGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKG 233
Query: 213 ---------------------VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPN 251
P V+W ++ SC+ Q + + F M G +
Sbjct: 234 FSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVS 293
Query: 252 EFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF- 310
+L++ + CA L S S NAL+ +Y K G++++A +F
Sbjct: 294 GEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFR 353
Query: 311 ---------------------------------EEITH-----PDIVSWNAVIAGCVQHE 332
EE+ H ++V+W +VI GC
Sbjct: 354 QIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQG 413
Query: 333 CNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV 392
D +L +M+ S N TI L CA + +LGR++H +I+ + V
Sbjct: 414 RGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQN 473
Query: 393 GLIDMYSKCEMLSDARRVYELMPKKDII 420
L++MY+KC +LS+ V+E + KD+I
Sbjct: 474 ALVNMYAKCGLLSEGSLVFEAIRDKDLI 501
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 164/386 (42%), Gaps = 52/386 (13%)
Query: 8 FSYINSLSFKPQTIHTTSRTIVDSQTNVVSNSQCF---QSFTKPPISYTNL---LSQCVA 61
F ++ FKP + TS SQ + + + +S L S C
Sbjct: 247 FEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAE 306
Query: 62 SKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSA 121
++L++ ++H ++I+ GF RN L+ +Y K G+ A L Q + SW++
Sbjct: 307 LEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ-IRNKGIESWNS 365
Query: 122 LISGYVQNGFGKEALLAFNDMCMLG----VKCNEFTFPSVLKACSIK------------- 164
LI+ +V G EAL F+++ + VK N T+ SV+K C+++
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Query: 165 ----------------------KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQL 202
LN+GR++HG + T + V N LV MYAKCG L
Sbjct: 426 QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLL 485
Query: 203 GDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
+ +F +I ++SWN++ Y F +A+ +F M+ G P+ +L +L+AC
Sbjct: 486 SEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSAC 545
Query: 263 --AGL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDI 318
AGL G + ++ +VD+ + G ++ A + + + P +
Sbjct: 546 SHAGLVEKGREIFYSMSKRFGLEPQQEHYA--CIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Query: 319 VSWNAVIAGCVQHECNDWALALLNEM 344
A++ C H+ D A + +++
Sbjct: 604 CVLGALLNSCRMHKNVDIAEGIASQL 629
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 9/267 (3%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
+++ Y K + A + T +V+W+A+ISGYV+N ++ L F M G++
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
N S L CS L +GR++H + + +D +L+ MY KCG+LGD+ KLF
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRN 267
+ VV+WNA+ S Y Q +A+ LF+EM+ IRP+ + +L AC AGL N
Sbjct: 343 EVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVN 402
Query: 268 -GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVI 325
G D ++ +VD+ + G++E A+ + + P + ++
Sbjct: 403 IGMAYFESMVRDYKVEPQPDHYT--CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLL 460
Query: 326 AGCVQH---ECNDWALALLNEMKSSGA 349
C H E ++A L ++ S A
Sbjct: 461 GACRVHKNVELAEFAAEKLLQLNSQNA 487
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 153/333 (45%), Gaps = 17/333 (5%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N ++S Y + F A+ D+ D SW+ +I+GY + G ++A F M +
Sbjct: 128 NIMLSCYVRNVNFEKAQSFFDRMPFKDAA-SWNTMITGYARRGEMEKARELFYSM----M 182
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANT-LVVMYAKCGQLGDSR 206
+ NE ++ +++ DL ++ V G VA T ++ Y K ++ +
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV-----VAWTAMITGYMKAKKVELAE 237
Query: 207 KLFGSI-VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL 265
+F + V ++V+WNA+ S YV++ + + LF+ M+ GIRPN LS L C+ L
Sbjct: 238 AMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL 297
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
D + +L+ MY K G + +A +FE + D+V+WNA+I
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMI 357
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI---KI 382
+G QH D AL L EM + P+ T + L AC G ++G ++ K+
Sbjct: 358 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKV 417
Query: 383 DTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
+ D + ++D+ + L +A ++ MP
Sbjct: 418 EPQPDHYTC--MVDLLGRAGKLEEALKLIRSMP 448
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 42/238 (17%)
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFK-EM 243
D NT++ YA+ G++ +R+LF S++ + VSWNA+ S Y++ +A FK
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP 213
Query: 244 VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI 303
VRG + + A++ Y K ++
Sbjct: 214 VRGVV----------------------------------------AWTAMITGYMKAKKV 233
Query: 304 ENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
E A A+F+++T + ++V+WNA+I+G V++ + L L M G PN +SSAL
Sbjct: 234 ELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG 293
Query: 363 CAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
C+ + LGRQ+H + K +D LI MY KC L DA +++E+M KKD++
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 8/158 (5%)
Query: 59 CVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVS 118
C +L LG ++H + + +D + L+S+Y KCG G A KL + + D VV+
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD-VVA 352
Query: 119 WSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSV 178
W+A+ISGY Q+G +AL F +M ++ + TF +VL AC+ +N+G + S+
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG-MAYFESM 411
Query: 179 VTGF----DSDGFVANTLVVMYAKCGQLGDSRKLFGSI 212
V + D + +V + + G+L ++ KL S+
Sbjct: 412 VRDYKVEPQPDHYTC--MVDLLGRAGKLEEALKLIRSM 447
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 159/373 (42%), Gaps = 48/373 (12%)
Query: 52 YTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQST 111
+ +L+ C + SL +HA ++R G LVS S Y+ + S
Sbjct: 32 FISLIHACKDTASLR---HVHAQILRRGVL-SSRVAAQLVSCSSLLKSPDYSLSIFRNSE 87
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
E + V +ALI G +N + ++ F M LGVK + TFP VLK+ S +GR
Sbjct: 88 ERNPFV-LNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGR 146
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGS----IVAPSVVSWNALFSCY 227
+H ++ D D FV +LV MYAK GQL + ++F I S++ WN L + Y
Sbjct: 147 ALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGY 206
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
++ A LF+ M RN
Sbjct: 207 CRAKDMHMATTLFRSMPE--------------------RNSG------------------ 228
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
S + L+ Y G + A +FE + ++VSW +I G Q + A++ EM
Sbjct: 229 -SWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
G PN +TI++ L AC+ G G ++H ++ D + L+DMY+KC L A
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 408 RRVYELMPKKDII 420
V+ M KDI+
Sbjct: 348 ATVFSNMNHKDIL 360
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
L+ Y G A++L + E +VV SW+ LI+G+ Q G + A+ + +M G+K
Sbjct: 233 LIKGYVDSGELNRAKQLFELMPEKNVV-SWTTLINGFSQTGDYETAISTYFEMLEKGLKP 291
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
NE+T +VL ACS L G ++HG + G D + LV MYAKCG+L + +F
Sbjct: 292 NEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVF 351
Query: 210 GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGS 269
++ ++SW A+ + +A+ F++M+ G +P+E +L AC
Sbjct: 352 SNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVD 411
Query: 270 XXXXXXXXXXXXXXXXDQFSANAL-VDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAG 327
L VD+ + G++ A + E + +PD+ +W A+
Sbjct: 412 LGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRA 471
Query: 328 CVQHE 332
C H+
Sbjct: 472 CKAHK 476
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 152/355 (42%), Gaps = 47/355 (13%)
Query: 67 LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE---TDVVVSWSALI 123
LG LHA ++ D R LV +Y+K G+ +A ++ ++S + + ++ W+ LI
Sbjct: 144 LGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLI 203
Query: 124 SGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD 183
+GY + KD++M + + +
Sbjct: 204 NGYCR-----------------------------------AKDMHMATTL----FRSMPE 224
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
+ +TL+ Y G+L +++LF + +VVSW L + + Q+ A+ + EM
Sbjct: 225 RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 244 VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI 303
+ G++PNE++++ +L+AC+ D+ ALVDMY+K G +
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 304 ENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
+ A VF + H DI+SW A+I G H A+ +M SG P+ + L AC
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 364 AAVGFKDLGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
DLG + I+ +V V +D+ + L++A + E MP
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLV--VDLLGRAGKLNEAHELVENMP 457
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 175/379 (46%), Gaps = 17/379 (4%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
++ ++LS C G+++H +I GF + R+ LV LY+ A KL D+
Sbjct: 114 TFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+ ++ V + L+ + Q G K + M + GV N T+ +++ CS + + G
Sbjct: 174 LDRNLAVC-NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 171 RKVHGMSVVTGFD-SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQ 229
+++H + V +G++ S+ FVAN LV Y+ CG L S + F ++ V+SWN++ S
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
++++DLF +M G RP+ LN C+ RN D S
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCS--RNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 290 ---ANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
+AL+DMY K IEN+ +++ + ++ N+++ + + + M
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 347 SGACPNVFTISSALKACAAVGFKDLGRQLHSCL------IKIDTDSDFFVAVGLIDMYSK 400
G + T+S+ LKA + L LHSC IK +D V+ LID Y+K
Sbjct: 411 EGTGIDEVTLSTVLKALSL----SLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTK 466
Query: 401 CEMLSDARRVYELMPKKDI 419
+R+V++ + +I
Sbjct: 467 SGQNEVSRKVFDELDTPNI 485
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 153/323 (47%), Gaps = 5/323 (1%)
Query: 96 KCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFP 155
K G A + D+ + DVV +++ LISG + G A+ + +M G++ + TFP
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVV-TYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD-SRKLFGSIVA 214
SVL CS + G +VH + GF + FV + LV +YA C +L D + KLF ++
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDEMLD 175
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR-NGSXXXX 273
++ N L C+ Q+ +++ M G+ N + ++ C+ R
Sbjct: 176 RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL 235
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHEC 333
+ F AN LVD YS G + ++ F + D++SWN++++ C +
Sbjct: 236 HSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGS 295
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTD-SDFFVAV 392
+L L ++M+ G P++ S L C+ G+Q+H ++K+ D S V
Sbjct: 296 VLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQS 355
Query: 393 GLIDMYSKCEMLSDARRVYELMP 415
LIDMY KC + ++ +Y+ +P
Sbjct: 356 ALIDMYGKCNGIENSALLYQSLP 378
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 174/393 (44%), Gaps = 44/393 (11%)
Query: 42 FQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSF-RNHLVSLYSKCGRF 100
+ K ++Y ++ C + + G +LH+ +++ G++ F N LV YS CG
Sbjct: 206 LEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL 265
Query: 101 GYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA 160
+ + + E DV+ SW++++S G ++L F+ M G + + F S L
Sbjct: 266 SGSMRSFNAVPEKDVI-SWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNF 324
Query: 161 CSIKKDLNMGRKVHGMSVVTGFD-SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS 219
CS D+ G+++H + GFD S V + L+ MY KC + +S L+ S+ ++
Sbjct: 325 CSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLEC 384
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA----------------CA 263
N+L + + + +++F M+ G +E +LS +L A C
Sbjct: 385 CNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCC 444
Query: 264 GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNA 323
+++G D + +L+D Y+K G+ E + VF+E+ P+I +
Sbjct: 445 AIKSG--------------YAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTS 490
Query: 324 VIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID 383
+I G ++ + +L EM P+ TI S L C+ G + G LI
Sbjct: 491 IINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGE-----LIFDS 545
Query: 384 TDSDFFVAVG------LIDMYSKCEMLSDARRV 410
+S + ++ G ++D+ + ++ A R+
Sbjct: 546 LESKYGISPGRKLYACMVDLLGRAGLVEKAERL 578
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 135/292 (46%), Gaps = 11/292 (3%)
Query: 47 KPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFS-HDPSFRNHLVSLYSKCGRFGYARK 105
+P +S+ N C + + G ++H ++++ GF ++ L+ +Y KC +
Sbjct: 316 RPFMSFLNF---CSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENS-A 371
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK- 164
L+ QS + ++L++ + G K+ + F M G +E T +VLKA S+
Sbjct: 372 LLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSL 431
Query: 165 -KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNAL 223
+ L+ VH ++ +G+ +D V+ +L+ Y K GQ SRK+F + P++ ++
Sbjct: 432 PESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSI 491
Query: 224 FSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC--AGLRNGSXXXXXXXXXXXX 281
+ Y ++ + V + +EM R + P+E ++ +L+ C +GL
Sbjct: 492 INGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYG 551
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHE 332
+ A +VD+ + G +E A + + D V+W++++ C H
Sbjct: 552 ISPGRKLYA-CMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHR 602
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 1/224 (0%)
Query: 198 KCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSI 257
K G L + + F + VV++N L S + + A++L+ EMV G+R + +
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 258 ILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPD 317
+L+ C+ + F +ALV +Y+ ++ A+ +F+E+ +
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 318 IVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHS 377
+ N ++ Q + + M+ G N T ++ C+ G+QLHS
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 378 CLIKIDTD-SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
++K + S+ FVA L+D YS C LS + R + +P+KD+I
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVI 281
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 69/132 (52%)
Query: 288 FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSS 347
++ N +D K G + +A F+E++ D+V++N +I+G ++ C+ A+ L EM S
Sbjct: 47 YTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSC 106
Query: 348 GACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
G + T S L C+ F G Q+H +I + + FV L+ +Y+ ++ A
Sbjct: 107 GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVA 166
Query: 408 RRVYELMPKKDI 419
++++ M +++
Sbjct: 167 LKLFDEMLDRNL 178
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 157/382 (41%), Gaps = 39/382 (10%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
+LHAH +R G L+ + + YARKL D + ++ LI Y +
Sbjct: 6 QLHAHCLRTGVDETKDLLQRLLLIPN----LVYARKLFDHH-QNSCTFLYNKLIQAYYVH 60
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
E+++ +N + G++ + TF + A + R +H +GF+SD F
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG-- 247
TL+ YAK G L +R++F + V WNA+ + Y + A++LF M R
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 248 ------------------------------IRPNEFSLSIILNACAGLRNGSXXXXXXXX 277
++PN ++ +L ACA L
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDW 336
+ + NA ++MYSK G I+ A +FEE+ ++ SWN++I H +D
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDE 300
Query: 337 ALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LI 395
AL L +M G P+ T L AC G G++L + ++ S G +I
Sbjct: 301 ALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMI 360
Query: 396 DMYSKCEMLSDARRVYELMPKK 417
D+ + L +A + + MP K
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMK 382
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 42/299 (14%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV--------------- 115
LH+ R GF D L++ Y+K G AR++ D+ ++ DV
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 116 ---------------VVSWSALISGYVQNGFGKEALLAFNDMCM---LGVKCNEFTFPSV 157
V SW+ +ISG+ QNG EAL F +CM VK N T SV
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMF--LCMEKDKSVKPNHITVVSV 221
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPS 216
L AC+ +L +GR++ G + GF + +V N + MY+KCG + +++LF + +
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 217 VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG---LRNGSXXXX 273
+ SWN++ EA+ LF +M+R G +P+ + +L AC + G
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 341
Query: 274 XXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH 331
+ + ++D+ + G+++ A + + + PD V W ++ C H
Sbjct: 342 SMEEVHKISPKLEHYG--CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFH 398
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 24/188 (12%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I+ ++L C L +G L + GF + N + +YSKCG A++L ++
Sbjct: 216 ITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEE 275
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ SW+++I +G EAL F M G K + TF +L AC
Sbjct: 276 LGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC-------- 327
Query: 170 GRKVHGMSVVTG---FDSDGFVANT---------LVVMYAKCGQLGDSRKLFGSI-VAPS 216
VHG VV G F S V ++ + + G+L ++ L ++ + P
Sbjct: 328 ---VHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPD 384
Query: 217 VVSWNALF 224
V W L
Sbjct: 385 AVVWGTLL 392
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 164/353 (46%), Gaps = 42/353 (11%)
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
A K+ D+ E DV+ S +A+I +V+ EA AF + LG++ NEFTF +V+ + +
Sbjct: 46 AHKVFDEIPELDVI-SATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK--------------- 207
+D+ +G+++H ++ G S+ FV + ++ Y K L D+R+
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 208 ----------------LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIR-P 250
LF ++ SVV+WNA+ + Q+ EAV+ F +M+R G+ P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 251 NEFSLSIILNACAGL-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAV 309
NE + + A + + +G+ + F N+L+ YSK G +E+++
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284
Query: 310 FEEITHP--DIVSWNAVIAGCVQHECNDWALALLNEM-KSSGACPNVFTISSALKACAAV 366
F ++ +IVSWN++I G + + A+A+ +M K + PN TI L AC
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 344
Query: 367 GFKDLGRQLHSCLIKIDTDSDFFVAVG----LIDMYSKCEMLSDARRVYELMP 415
G G + + D D + + ++DM S+ +A + + MP
Sbjct: 345 GLIQEGYMYFNKAVN-DYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMP 396
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 152/344 (44%), Gaps = 44/344 (12%)
Query: 32 QTNVVSNSQCFQSF----TKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSF 86
++ V SQ F+ +P ++ ++ S+ + LG +LH + ++ G + +
Sbjct: 71 ESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFV 130
Query: 87 RNHLVSLYSKCGRFGYARKLVDQSTETDVV------------------------------ 116
+ +++ Y K AR+ D + + +VV
Sbjct: 131 GSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSV 190
Query: 117 VSWSALISGYVQNGFGKEALLAFNDMCMLGVKC-NEFTFPSVLKACSIKKDLNMGRKVHG 175
V+W+A+I G+ Q G +EA+ F DM GV NE TFP + A S G+ +H
Sbjct: 191 VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHA 250
Query: 176 MSV-VTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP--SVVSWNALFSCYVQSDF 232
++ G + FV N+L+ Y+KCG + DS F + ++VSWN++ Y +
Sbjct: 251 CAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGR 310
Query: 233 CVEAVDLFKEMVRG-GIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQF 288
EAV +F++MV+ +RPN ++ +L AC AGL + G +
Sbjct: 311 GEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELE 370
Query: 289 SANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQH 331
+VDM S+ GR + A + + + P I W A++ GC H
Sbjct: 371 HYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIH 414
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 33/237 (13%)
Query: 204 DSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
++ K+F I V+S A+ +V+ VEA FK ++ GIRPNEF+ ++ +
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 264 GLRNGSXXXXXXXXXXXXXXXXDQFSANA------------------------------- 292
R+ + F +A
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 293 LVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC-P 351
L+ Y K E A+++F + +V+WNAVI G Q N+ A+ +M G P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIK-IDTDSDFFVAVGLIDMYSKCEMLSDA 407
N T A+ A + + G+ +H+C IK + + FV LI YSKC + D+
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%)
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
I NA VF+EI D++S AVI V+ + A + G PN FT + + +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 363 CAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
LG+QLH +K+ S+ FV +++ Y K L+DARR ++
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFD 152
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 68 GMELHAHLIRF-GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ-STETDVVVSWSALISG 125
G +HA I+F G + N L+S YSKCG + ++ E +VSW+++I G
Sbjct: 245 GKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWG 304
Query: 126 YVQNGFGKEALLAFNDMCM-LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
Y NG G+EA+ F M ++ N T VL AC+ + G ++ V +D
Sbjct: 305 YAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGY-MYFNKAVNDYDD 363
Query: 185 DGFVA----NTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF-SCYVQSD 231
+ +V M ++ G+ ++ +L S+ + P + W AL C + S+
Sbjct: 364 PNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSN 416
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 130/303 (42%), Gaps = 41/303 (13%)
Query: 65 LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV--------- 115
L LG HA ++ FG DP R L+++YS CG A+++ D S D+
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 116 ---------------------VVSWSALISGYVQNGFGKEALLAFNDMCMLG-----VKC 149
V+SWS LI+GYV G KEAL F +M + V+
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
NEFT +VL AC L G+ VH + D + L+ MYAKCG L ++++F
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 210 GSIVAPS-VVSWNALFSCYVQSDFCVEAVDLFKEMVRG-GIRPNEFSLSIILNACA--GL 265
++ + V +++A+ C E LF EM I PN + IL AC GL
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAV 324
N Q +VD+Y + G I+ A + + PD++ W ++
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYG-CMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSL 376
Query: 325 IAG 327
++G
Sbjct: 377 LSG 379
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 129/302 (42%), Gaps = 39/302 (12%)
Query: 153 TFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQL---------- 202
TFP +L + L +G++ H ++ G D D FV +L+ MY+ CG L
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 203 ---------------------GDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFK 241
D+RKLF + +V+SW+ L + YV EA+DLF+
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 242 EMV-----RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
EM +RPNEF++S +L+AC L D AL+DM
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDM 243
Query: 297 YSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC-PNVF 354
Y+K G +E A VF + + D+ +++A+I + D L +EM +S PN
Sbjct: 244 YAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSV 303
Query: 355 TISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYEL 413
T L AC G + G+ +I+ + G ++D+Y + ++ +A
Sbjct: 304 TFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIAS 363
Query: 414 MP 415
MP
Sbjct: 364 MP 365
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 6/140 (4%)
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
D + N++V+ Y+K G I++A +F+E+ +++SW+ +I G V AL L EM+
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 346 -----SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSK 400
+ PN FT+S+ L AC +G + G+ +H+ + K + D + LIDMY+K
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 401 CEMLSDARRVYE-LMPKKDI 419
C L A+RV+ L KKD+
Sbjct: 247 CGSLERAKRVFNALGSKKDV 266
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Query: 43 QSFTKP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFG 101
++F +P + + +LS C +L G +HA++ ++ D L+ +Y+KCG
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCML-GVKCNEFTFPSVLKA 160
A+++ + V ++SA+I G E F++M + N TF +L A
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 161 CSIKKDLNMGRKVHGMSVVT-GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVV 218
C + +N G+ M + G +V +Y + G + ++ S+ + P V+
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 219 SWNALFS 225
W +L S
Sbjct: 372 IWGSLLS 378
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 169/406 (41%), Gaps = 49/406 (12%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPS--FRNHLVSLYSKCGRFGYARKLVDQS-- 110
LL C L G ELHA L G P N L Y+ G A+KL D+
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 111 TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG 170
+E D V W+ L+S + + G ++ F +M V+ ++ + + C+ +DL
Sbjct: 72 SEKDNV-DWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC---- 226
++ HG++V G + V N L+ MY KCG + + +++F + SVVSW +
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 227 ---------------------------YVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSII 258
Y+ + F E ++L EMV R G N +L +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 259 LNACA-------GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE 311
L+ACA G D ALVDMY+K G I++++ VF
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 312 EITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDL 371
+ ++V+WNA+ +G H + + +M P+ T ++ L AC+ G D
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDE 369
Query: 372 G-RQLHSC-LIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
G R HS ++ D + ++D+ + ++ +A + MP
Sbjct: 370 GWRCFHSLRFYGLEPKVDHYAC--MVDLLGRAGLIEEAEILMREMP 413
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 124/307 (40%), Gaps = 43/307 (14%)
Query: 157 VLKACSIKKDLNMGRKVHGMSVVTGFDS--DGFVANTLVVMYAKCGQLGDSRKLFGSIVA 214
+L+ C+ + L G+++H + +G +++N L YA G++ ++KLF I
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 215 PSV--VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX 272
V W L S + + V ++ LF EM R + ++ S+ + CA L +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 273 XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHE 332
NAL+DMY K G + +FEE+ +VSW V+ V+ E
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 333 CNDWALALLNEMKSSGACP--------------------------------NVFTISSAL 360
+ + +EM A N T+ S L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 361 KACAAVGFKDLGRQLHSCLIKID-------TDSDFFVAVGLIDMYSKCEMLSDARRVYEL 413
ACA G +GR +H +K + + D V L+DMY+KC + + V+ L
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 414 MPKKDII 420
M K++++
Sbjct: 312 MRKRNVV 318
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 135/326 (41%), Gaps = 49/326 (15%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+S L C + L + H ++ G N L+ +Y KCG +++ ++
Sbjct: 112 VSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEE 171
Query: 110 STETDVV------------------------------VSWSALISGYVQNGFGKEALLAF 139
E VV V+W+ +++GY+ GF +E L
Sbjct: 172 LEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELL 231
Query: 140 NDMCML-GVKCNEFTFPSVLKACSIKKDLNMGRKVH--------GMSVVTGFDSDGFVAN 190
+M G N T S+L AC+ +L +GR VH M +D D V
Sbjct: 232 AEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYD-DVMVGT 290
Query: 191 TLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
LV MYAKCG + S +F + +VV+WNALFS +D+F +M+R ++P
Sbjct: 291 ALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKP 349
Query: 251 NEFSLSIILNAC--AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVA 308
++ + + +L+AC +G+ + D ++ +VD+ + G IE A
Sbjct: 350 DDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYA--CMVDLLGRAGLIEEAEI 407
Query: 309 VFEEITHPDIVSWNAVIAGCVQHECN 334
+ E+ P N V+ G + C+
Sbjct: 408 LMREMPVPP----NEVVLGSLLGSCS 429
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 1/303 (0%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKACSIKKDLNMGRKVH 174
+ SW+ +I + ++GF +++ F M V+ ++FT P +L+ACS ++ G +H
Sbjct: 98 IFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIH 157
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV 234
+ + GF S FV++ LV+MY G+L +RKLF + V + A+F YVQ +
Sbjct: 158 VLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAM 217
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
+ +F+EM G + + +L AC L NA+
Sbjct: 218 LGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAIT 277
Query: 295 DMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVF 354
DMY K ++ A VF ++ D++SW+++I G + L +EM G PN
Sbjct: 278 DMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAV 337
Query: 355 TISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELM 414
T L ACA G + + + + + + D S+ +L +A + E M
Sbjct: 338 TFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM 397
Query: 415 PKK 417
P K
Sbjct: 398 PVK 400
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
Query: 184 SDGFVANTLVVMYAKCGQL-GDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
S+ +++ LV+ Y+K L S +F + ++ SWN + + +S F +++DLF
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 243 MVRGG-IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG 301
M R +RP++F+L +IL AC+ R F ++ALV MY G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 302 RIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALK 361
++ +A +F+++ D V + A+ G VQ LA+ EM SG + + S L
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 362 ACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
AC +G G+ +H I+ + + + DMY KC +L A V+ M ++D+I
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVI 302
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 8/249 (3%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N ++S + G AR++ D E + SW +I + +NGF EAL F M GV
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDA-SWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+ T S+L C+ L+ G++VH V FD D +VA+ L+ MY KCG+L S+
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM-VRGGIRPNEFSLSIILNAC--AG 264
+F + ++ WN++ S Y EA+ +F EM + G +PNE + L+AC AG
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 265 L-RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWN 322
+ G ++ +VDM + GR A+ + + +T PD W
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYA--CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWG 505
Query: 323 AVIAGCVQH 331
+++ C H
Sbjct: 506 SLLGACRTH 514
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 151/336 (44%), Gaps = 23/336 (6%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N LVS Y K G ARK+ D E +VV SW+AL+ GYV NG A F M
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVV-SWTALVKGYVHNGKVDVAESLFWKM----P 137
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+ N+ ++ +L ++ K++ M D D +++ K G++ ++R+
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEARE 193
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRN 267
+F + SV++W + + Y Q++ +A +F M P + +S ++N
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM------PEKTEVSWTSMLMGYVQN 247
Query: 268 GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAG 327
G + NA++ + G I A VF+ + + SW VI
Sbjct: 248 GRIEDAEELFEVMPVKPV--IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIK- 304
Query: 328 CVQHECNDW---ALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDT 384
HE N + AL L M+ G P T+ S L CA++ G+Q+H+ L++
Sbjct: 305 --IHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 385 DSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
D D +VA L+ MY KC L ++ +++ P KDII
Sbjct: 363 DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 138/295 (46%), Gaps = 12/295 (4%)
Query: 87 RNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
R ++ K GR AR++ D+ +E V+ +W+ +++GY QN +A F+ M
Sbjct: 175 RTSMIHGLCKEGRVDEAREIFDEMSERSVI-TWTTMVTGYGQNNRVDDARKIFDVM---- 229
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA-NTLVVMYAKCGQLGDS 205
+ E ++ S+L + GR + +A N ++ + G++ +
Sbjct: 230 PEKTEVSWTSMLMGY-----VQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKA 284
Query: 206 RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL 265
R++F S+ + SW + + ++ F +EA+DLF M + G+RP +L IL+ CA L
Sbjct: 285 RRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASL 344
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
+ D + A+ L+ MY K G + + +F+ DI+ WN++I
Sbjct: 345 ASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Query: 326 AGCVQHECNDWALALLNEMKSSGAC-PNVFTISSALKACAAVGFKDLGRQLHSCL 379
+G H + AL + EM SG+ PN T + L AC+ G + G +++ +
Sbjct: 405 SGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 54 NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTET 113
++LS C + SL G ++HA L+R F D + L+++Y KCG ++ + D+
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK 395
Query: 114 DVVVSWSALISGYVQNGFGKEALLAFNDMCMLG-VKCNEFTFPSVLKACSIKKDLNMGRK 172
D+++ W+++ISGY +G G+EAL F +M + G K NE TF + L ACS + G K
Sbjct: 396 DIIM-WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLK 454
Query: 173 VH-GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF-SCYVQ 229
++ M V G +V M + G+ ++ ++ S+ V P W +L +C
Sbjct: 455 IYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Query: 230 S-----DFCVEAV 237
S +FC + +
Sbjct: 515 SQLDVAEFCAKKL 527
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 48/261 (18%)
Query: 84 PSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMC 143
P N ++ S+ G+ ARKL D S ++ + SW+++++GY N ++A F++M
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFD-SCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP 75
Query: 144 MLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLG 203
D + N LV Y K G++
Sbjct: 76 ---------------------------------------DRNIISWNGLVSGYMKNGEID 96
Query: 204 DSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA 263
++RK+F + +VVSW AL YV + A LF +M P + +S +
Sbjct: 97 EARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKVSWTVMLIG 150
Query: 264 GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNA 323
L++G D + +++ K GR++ A +F+E++ +++W
Sbjct: 151 FLQDGR--IDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT 208
Query: 324 VIAGCVQHECNDWALALLNEM 344
++ G Q+ D A + + M
Sbjct: 209 MVTGYGQNNRVDDARKIFDVM 229
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 49/233 (21%)
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI 248
AN + ++ G++ ++RKLF S + S+ SWN++ + Y + +A LF EM I
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 249 RPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVA 308
S N LV Y K G I+ A
Sbjct: 80 ---------------------------------------ISWNGLVSGYMKNGEIDEARK 100
Query: 309 VFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGF 368
VF+ + ++VSW A++ G V + D A +L +M P +S + +GF
Sbjct: 101 VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKVSWTV---MLIGF 151
Query: 369 KDLGRQLHSC-LIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
GR +C L ++ D D +I K + +AR +++ M ++ +I
Sbjct: 152 LQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI 204
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 176/415 (42%), Gaps = 49/415 (11%)
Query: 33 TNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVS 92
+N+V N+ F P ++ LL C + L + +H L+R D + L++
Sbjct: 2 SNIVLNTL---RFKHPKLA---LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLA 52
Query: 93 LYSKCGRF-------GYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCML 145
L F GYA + Q ++ V ++ LI + +A + M
Sbjct: 53 LCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFV-FNLLIRCFSTGAEPSKAFGFYTQMLKS 111
Query: 146 GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS 205
+ + TFP ++KA S + + +G + H V GF +D +V N+LV MYA CG + +
Sbjct: 112 RIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAA 171
Query: 206 RKLFGSIVAPSVVSWNALFSCYVQ------------------------------SDFCVE 235
++FG + VVSW ++ + Y + + C E
Sbjct: 172 GRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFE 231
Query: 236 -AVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
A+DLF+ M R G+ NE + ++++CA L + ALV
Sbjct: 232 KAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALV 291
Query: 295 DMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVF 354
DM+ + G IE A+ VFE + D +SW+++I G H A+ ++M S G P
Sbjct: 292 DMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV 351
Query: 355 TISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDAR 408
T ++ L AC+ G + G +++ + K G ++DM + L++A
Sbjct: 352 TFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAE 406
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 43/307 (14%)
Query: 152 FTFP--SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM-------YAKCGQL 202
F P ++L++CS DL + +HG + T SD FVA+ L+ + L
Sbjct: 11 FKHPKLALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLL 67
Query: 203 GDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
G + +F I P++ +N L C+ +A + +M++ I P+ + ++ A
Sbjct: 68 GYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS 127
Query: 263 AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYS------------------------ 298
+ + D + N+LV MY+
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 299 -------KGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
K G +ENA +F+E+ H ++ +W+ +I G ++ C + A+ L MK G
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVY 411
N + S + +CA +G + G + + ++K + + L+DM+ +C + A V+
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 412 ELMPKKD 418
E +P+ D
Sbjct: 308 EGLPETD 314
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 138/323 (42%), Gaps = 53/323 (16%)
Query: 103 ARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
AR+ D S E D+V+ W+ +ISGY++ G EA F+ M C
Sbjct: 78 ARRYFDLSPERDIVL-WNTMISGYIEMGNMLEARSLFDQM-----------------PCR 119
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA 222
D NT++ YA G + ++F + +V SWN
Sbjct: 120 ----------------------DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNG 157
Query: 223 LFSCYVQSDFCVEAVDLFKEMV-RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
L Y Q+ E + FK MV G + PN+ +++++L+ACA L G+
Sbjct: 158 LIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL--GAFDFGKWVHKYGE 215
Query: 282 XXXXDQFSAN---ALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWAL 338
++ N AL+DMY K G IE A+ VF+ I D++SWN +I G H AL
Sbjct: 216 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEAL 275
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG----L 394
L +EMK+SG P+ T L AC +G + G + + TD + +
Sbjct: 276 NLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMF---TDFSIMPEIEHCGCV 332
Query: 395 IDMYSKCEMLSDARRVYELMPKK 417
+D+ S+ L+ A MP K
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVK 355
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 41/218 (18%)
Query: 205 SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG 264
+R+ F +V WN + S Y++ +EA LF +M C
Sbjct: 78 ARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM-----------------PC-- 118
Query: 265 LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAV 324
D S N +++ Y+ G +E VF+++ ++ SWN +
Sbjct: 119 --------------------RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGL 158
Query: 325 IAGCVQHECNDWALALLNEMKSSGAC-PNVFTISSALKACAAVGFKDLGRQLHSCLIKID 383
I G Q+ L M G+ PN T++ L ACA +G D G+ +H +
Sbjct: 159 IKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLG 218
Query: 384 TDS-DFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ D V LIDMY KC + A V++ + ++D+I
Sbjct: 219 YNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSH-DPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+ T +LS C + G +H + G++ D + +N L+ +Y KCG A ++
Sbjct: 190 TMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG 249
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
D ++SW+ +I+G +G G EAL F++M G+ ++ TF VL AC
Sbjct: 250 IKRRD-LISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCAC 300
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 168/399 (42%), Gaps = 40/399 (10%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSL--YSKCGRFGYARKLVDQSTE 112
L QC KS++ ++H LI G S + F + +S S G YA K + + ++
Sbjct: 14 LRHQC---KSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSD 70
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRK 172
W+ +I G+ + ++++ + M G+ + T+P ++K+ S + +G
Sbjct: 71 PPNY-GWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGS 129
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDF 232
+H V +G + D F+ NTL+ MY +RKLF + ++V+WN++ Y +S
Sbjct: 130 LHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGD 189
Query: 233 CV-------------------------------EAVDLFKEMVR-GGIRPNEFSLSIILN 260
V +A+++F +M+R G + NE ++ ++
Sbjct: 190 VVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVIC 249
Query: 261 ACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF--EEITHPDI 318
ACA L + +L+DMY+K G I +A +VF + D
Sbjct: 250 ACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDA 309
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSC 378
+ WNA+I G H +L L ++M+ S P+ T L AC+ G
Sbjct: 310 LMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKS 369
Query: 379 LIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
L + + ++D+ S+ ++ DA MP K
Sbjct: 370 LKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIK 408
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 9/250 (3%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N ++ Y+K G AR + D+ +E DVV +WS++I GYV+ G +AL F+ M +G
Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSERDVV-TWSSMIDGYVKRGEYNKALEIFDQMMRMGS 236
Query: 148 -KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
K NE T SV+ AC+ LN G+ VH + + +L+ MYAKCG +GD+
Sbjct: 237 SKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAW 296
Query: 207 KLF--GSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA- 263
+F S+ + WNA+ F E++ LF +M I P+E + +L AC+
Sbjct: 297 SVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 356
Query: 264 -GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSW 321
GL + + ++ +VD+ S+ G +++A E+ P
Sbjct: 357 GGLVKEAWHFFKSLKESGAEPKSEHYA--CMVDVLSRAGLVKDAHDFISEMPIKPTGSML 414
Query: 322 NAVIAGCVQH 331
A++ GC+ H
Sbjct: 415 GALLNGCINH 424
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%)
Query: 298 SKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTIS 357
S G ++ A +++ P WN VI G + ++++ +M G P+ T
Sbjct: 53 SSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYP 112
Query: 358 SALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+K+ + + + LG LH ++K + D F+ LI MY + AR++++ MP K
Sbjct: 113 FLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK 172
Query: 418 DII 420
+++
Sbjct: 173 NLV 175
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++ +++ C +L G +H +++ + L+ +Y+KCG G A + +
Sbjct: 242 VTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYR 301
Query: 110 ST--ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
++ ETD ++ W+A+I G +GF +E+L F+ M + +E TF +L ACS
Sbjct: 302 ASVKETDALM-WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 171/397 (43%), Gaps = 32/397 (8%)
Query: 48 PPISY--TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
PP S+ T++L C +++ G +HA ++ G + LV LYS+ G A+K
Sbjct: 101 PPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKK 160
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLK------ 159
D E + V SW++L+ GY+++G EA F+ + S K
Sbjct: 161 AFDDIAEKNTV-SWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGN 219
Query: 160 ACSIKKDLNMGRKVHGMSVVTGF-----------------DSDGFVANTLVVMYAKCGQL 202
ACS+ + + ++ G+ +G T++ Y K G +
Sbjct: 220 ACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDV 279
Query: 203 GDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG--IRPNEFSLSIILN 260
+ +LF + + ++A+ +CY Q+ +A+ LF +M+ I+P+E +LS +++
Sbjct: 280 QSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVS 339
Query: 261 ACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVS 320
A + L N S D + +L+D+Y KGG A +F + D VS
Sbjct: 340 ANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS 399
Query: 321 WNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI 380
++A+I GC + A +L M PNV T + L A + G G + + +
Sbjct: 400 YSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK 459
Query: 381 --KIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
++ +D + ++DM + L +A + + MP
Sbjct: 460 DHNLEPSADHYGI--MVDMLGRAGRLEEAYELIKSMP 494
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 171/394 (43%), Gaps = 32/394 (8%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSH-DPSFRNHLVSLYSKCGR--FGYARKLVDQST 111
L +CV L ++HA L+ ++H +P + + + R Y ++++
Sbjct: 9 FLQRCVV---LEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFN 65
Query: 112 ETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGR 171
D SW L+ Q+ KE + + DM G+ + SVL+AC +++ G+
Sbjct: 66 GHDSF-SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGK 124
Query: 172 KVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSD 231
+H ++ G +V LV +Y++ G + ++K F I + VSWN+L Y++S
Sbjct: 125 PIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESG 184
Query: 232 FCVEAVDLFKEM---------------VRGGIRPNEFSL--SIILNACAG---LRNGSXX 271
EA +F ++ + G N SL ++ L + A L G
Sbjct: 185 ELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVN 244
Query: 272 XXXXXXXXXXXXXXDQFSANALVDM---YSKGGRIENAVAVFEEITHPDIVSWNAVIAGC 328
Q + + + M Y+K G +++A +F ++ D + ++A+IA
Sbjct: 245 CREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACY 304
Query: 329 VQHECNDWALALLNEM--KSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDS 386
Q+ AL L +M ++S P+ T+SS + A + +G G + S + +
Sbjct: 305 TQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKI 364
Query: 387 DFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
D ++ LID+Y K + A +++ + KKD +
Sbjct: 365 DDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTV 398
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 151/357 (42%), Gaps = 51/357 (14%)
Query: 67 LGMELHAHLIRFGFS---HDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALI 123
LG +LHA +I G+ HD LV +Y+ G A+ L+++S + + S + +I
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFD---LQSCNIII 375
Query: 124 SGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD 183
+ Y++NG + A E F V K L+ KV S++ G
Sbjct: 376 NRYLKNGDLERA---------------ETLFERV-------KSLH--DKVSWTSMIDG-- 409
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
Y + G + + LF + V+W + S VQ++ EA L +M
Sbjct: 410 ------------YLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDM 457
Query: 244 VRGGIRPNEFSLSIILNACAGLRN--GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGG 301
VR G++P + S++L++ N D N+LV MY+K G
Sbjct: 458 VRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCG 517
Query: 302 RIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALK 361
IE+A +F ++ D VSWN++I G H D AL L EM SG PN T L
Sbjct: 518 AIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLS 577
Query: 362 ACAAVGFKDLGRQLHSCLIK---IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP 415
AC+ G G +L + + I D +++ +ID+ + L +A +P
Sbjct: 578 ACSHSGLITRGLELFKAMKETYSIQPGIDHYIS--MIDLLGRAGKLKEAEEFISALP 632
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 17/257 (6%)
Query: 82 HDPSFRNHLVSLYSKCG----RFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALL 137
HD ++ Y + G FG +KL D+ V+W+ +ISG VQN EA
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG-----VTWTVMISGLVQNELFAEAAS 452
Query: 138 AFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTG--FDSDGFVANTLVVM 195
+DM G+K T+ +L + +L+ G+ +H + T +D D + N+LV M
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSM 512
Query: 196 YAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSL 255
YAKCG + D+ ++F +V VSWN++ +A++LFKEM+ G +PN +
Sbjct: 513 YAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTF 572
Query: 256 SIILNACAG---LRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE 312
+L+AC+ + G D + +++D+ + G+++ A
Sbjct: 573 LGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI--SMIDLLGRAGKLKEAEEFISA 630
Query: 313 ITH-PDIVSWNAVIAGC 328
+ PD + A++ C
Sbjct: 631 LPFTPDHTVYGALLGLC 647
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 151/341 (44%), Gaps = 52/341 (15%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMC--MLGV 147
+V Y + G A +L + E ++V SW+A+ISG+ N +EAL+ F +M + V
Sbjct: 237 MVYGYCRYGDVREAYRLFCEMPERNIV-SWTAMISGFAWNELYREALMLFLEMKKDVDAV 295
Query: 148 KCNEFTFPSVLKACSIK--KDLNMGRKVHGMSVVTGF---DSDGFVANTLVVMYAKCGQL 202
N T S+ AC + +G ++H + G+ D DG +A +LV MYA G +
Sbjct: 296 SPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLI 355
Query: 203 GDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
++ L + + S N + + Y+++ A LF+ +
Sbjct: 356 ASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERV------------------- 394
Query: 263 AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWN 322
D+ S +++D Y + G + A +F+++ D V+W
Sbjct: 395 -------------------KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWT 435
Query: 323 AVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKI 382
+I+G VQ+E A +LL++M G P T S L + A D G+ +H C+I
Sbjct: 436 VMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH-CVIAK 494
Query: 383 DT---DSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
T D D + L+ MY+KC + DA ++ M +KD +
Sbjct: 495 TTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV 535
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 140/327 (42%), Gaps = 58/327 (17%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
L+S Y+K G AR L + E ++V +A+++GYV+ EA F +M
Sbjct: 83 LLSKYAKTGYLDEARVLFEVMPERNIVTC-NAMLTGYVKCRRMNEAWTLFREM-----PK 136
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA-NTLVVMYAKCGQLGDSRKL 208
N ++ +L A + GR + + V+ NTLV + G + ++++
Sbjct: 137 NVVSWTVMLTALC-----DDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQV 191
Query: 209 FGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNG 268
F ++ + VVSWNA+ Y+++D EA LF +M +
Sbjct: 192 FDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV-------------------- 231
Query: 269 SXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGC 328
+ ++V Y + G + A +F E+ +IVSW A+I+G
Sbjct: 232 -------------------VTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGF 272
Query: 329 VQHECNDWALALLNEMKS--SGACPNVFTISSALKACAAVG--FKDLGRQLHSCLIK--- 381
+E AL L EMK PN T+ S AC +G F+ LG QLH+ +I
Sbjct: 273 AWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGW 332
Query: 382 IDTDSDFFVAVGLIDMYSKCEMLSDAR 408
D D +A L+ MY+ +++ A+
Sbjct: 333 ETVDHDGRLAKSLVHMYASSGLIASAQ 359
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSF--RNHLVSLYSKCGRFGYARKLVD 108
+Y+ LLS A+ +L G +H + + +DP +N LVS+Y+KCG A ++
Sbjct: 468 TYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFA 527
Query: 109 QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
+ + D VSW+++I G +G +AL F +M G K N TF VL ACS
Sbjct: 528 KMVQKD-TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS 580
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVAN-----TLVVMYAKCGQLGDSRKLFGSIVAPSV 217
I + L+ G VH ++ G + +L+ YAK G L ++R LF + ++
Sbjct: 49 ILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNI 108
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA-CAGLRNGSXXXXXXX 276
V+ NA+ + YV+ EA LF+EM + N S +++L A C R+
Sbjct: 109 VTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRS-----EDAV 158
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDW 336
+ S N LV + G +E A VF+ + D+VSWNA+I G ++++ +
Sbjct: 159 ELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEE 218
Query: 337 ALALLNEMKSSGACPNVFTISS 358
A L +M NV T +S
Sbjct: 219 AKLLFGDMSEK----NVVTWTS 236
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 166/394 (42%), Gaps = 43/394 (10%)
Query: 62 SKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSA 121
S S+T ++HA LI G D S+ + L RFG + V + +
Sbjct: 32 SNSITHLFQVHARLITSGNFWDSSW---AIRLLKSSSRFGDSSYTVSIYRSIGKLYCANP 88
Query: 122 LISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTG 181
+ Y+ + K+AL + D+ G + +TF S++ ++ G+ HG ++ G
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 182 FDSDGFVANTLVVMYAKCGQLGDSRKLF-----------GSIVA---------------- 214
D V N+L+ MY CG L ++KLF SI+A
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 215 ----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC---AGLRN 267
+++SWN + S Y+ ++ ++ LF+EMVR G + NE +L ++LNAC A L+
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 268 G-SXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIA 326
G S D AL+DMY K + A +F+ ++ + V+WN +I
Sbjct: 269 GRSVHASLIRTFLNSSVVID----TALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMIL 324
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLI-KIDTD 385
H + L L M + P+ T L CA G G+ +S ++ +
Sbjct: 325 AHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+F + ++YS +A + +P +D+
Sbjct: 385 PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDV 418
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 159/410 (38%), Gaps = 77/410 (18%)
Query: 49 PISYT--NLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P SYT +L+S + + G H I+ G +N L+ +Y+ CG A+KL
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 107 VDQSTETDVV------------------------------VSWSALISGYVQNGFGKEAL 136
+ + D+V +SW+ +IS Y+ ++
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 137 LAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMY 196
F +M G + NE T +L AC L GR VH + T +S + L+ MY
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 197 AKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
KC ++G +R++F S+ + V+WN + + ++LF+ M+ G +RP+E +
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 257 IILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA-------LVDMYSKGGRIENAVAV 309
+L CA R G D+F + ++YS G E A
Sbjct: 356 GVLCGCA--RAG----LVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEA 409
Query: 310 FEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK 369
+ + D+ E WA N + SS FT G
Sbjct: 410 LKNLPDEDVTP-----------ESTKWA----NLLSSSR-----FT-----------GNP 438
Query: 370 DLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
LG + LI+ D + + + L+++YS D RV E++ ++ I
Sbjct: 439 TLGESIAKSLIETDPLNYKYYHL-LMNIYSVTGRWEDVNRVREMVKERKI 487
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 162/359 (45%), Gaps = 34/359 (9%)
Query: 81 SHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFN 140
S D N ++S Y+K R G A L ++ E + V SWSA+I+G+ QNG A++ F
Sbjct: 133 SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAV-SWSAMITGFCQNGEVDSAVVLFR 191
Query: 141 DMCMLGVKCNEFTFPSVLKACSIKKD-LNMGRKVHGM--SVVTGFDSDGFVANTLVVMYA 197
M + + L A IK + L+ V G S+V+G + + NTL+V Y
Sbjct: 192 KM-----PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYG 246
Query: 198 KCGQLGDSRKLFGSI---------------VAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
+ GQ+ +R LF I +VVSWN++ Y++ V A LF +
Sbjct: 247 QRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQ 306
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
M + S + +++ + D S N +V Y+ G
Sbjct: 307 MKD----RDTISWNTMIDGYVHV----SRMEDAFALFSEMPNRDAHSWNMMVSGYASVGN 358
Query: 303 IENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
+E A FE+ VSWN++IA +++ A+ L M G P+ T++S L A
Sbjct: 359 VELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
Query: 363 CAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMP-KKDII 420
+ LG Q+H ++K D V LI MYS+C + ++RR+++ M K+++I
Sbjct: 419 STGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVI 476
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 81 SHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFN 140
+ D N +VS Y+ G AR +++ E V SW+++I+ Y +N KEA+ F
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV-SWNSIIAAYEKNKDYKEAVDLFI 398
Query: 141 DMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCG 200
M + G K + T S+L A + +L +G ++H + VV D V N L+ MY++CG
Sbjct: 399 RMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQI-VVKTVIPDVPVHNALITMYSRCG 457
Query: 201 QLGDSRKLFGSI-VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
++ +SR++F + + V++WNA+ Y EA++LF M GI P+ + +L
Sbjct: 458 EIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVL 517
Query: 260 NAC--AGLRNGSXXX-XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-H 315
NAC AGL + + + +S +LV++ S G+ E A+ + +
Sbjct: 518 NACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYS--SLVNVTSGQGQFEEAMYIITSMPFE 575
Query: 316 PDIVSWNAVIAGC 328
PD W A++ C
Sbjct: 576 PDKTVWGALLDAC 588
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 118/284 (41%), Gaps = 42/284 (14%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV 147
N ++ Y K G AR L DQ + D + SW+ +I GYV ++A F++M
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTI-SWNTMIDGYVHVSRMEDAFALFSEMP---- 339
Query: 148 KCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRK 207
+ D N +V YA G + +R
Sbjct: 340 -----------------------------------NRDAHSWNMMVSGYASVGNVELARH 364
Query: 208 LFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRN 267
F VSWN++ + Y ++ EAVDLF M G +P+ +L+ +L+A GL N
Sbjct: 365 YFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVN 424
Query: 268 GSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIA 326
D NAL+ MYS+ G I + +F+E+ ++++WNA+I
Sbjct: 425 -LRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG 483
Query: 327 GCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD 370
G H AL L MKS+G P+ T S L ACA G D
Sbjct: 484 GYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVD 527
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 47 KP-PISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
KP P + T+LLS +L LGM++H +++ P N L+++YS+CG +R+
Sbjct: 406 KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRR 464
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
+ D+ V++W+A+I GY +G EAL F M G+ + TF SVL AC+
Sbjct: 465 IFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACA 521
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 198 KCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSI 257
+ G + ++R +F + A + V+WN + S YV+ +A LF M + + +S
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 258 ILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPD 317
+ +C G+R D FS N ++ Y+K RI A+ +FE++ +
Sbjct: 112 YV-SCGGIR----FLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 318 IVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
VSW+A+I G Q+ D A+ L +M + P
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 173/390 (44%), Gaps = 61/390 (15%)
Query: 29 VDSQTNVVSNSQCFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFR- 87
VDS+ NVV+ +T ++S + SK L++ L F P
Sbjct: 103 VDSRKNVVT--------------WTAMVSGYLRSKQLSIAEML--------FQEMPERNV 140
Query: 88 ---NHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCM 144
N ++ Y++ GR A +L D+ E ++V SW++++ VQ G EA+ F M
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEMPERNIV-SWNSMVKALVQRGRIDEAMNLFERMPR 199
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRK----------VHGMSVVTGF------------ 182
V ++ +++ + ++ R+ + +++TG+
Sbjct: 200 RDV----VSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQL 255
Query: 183 -----DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAV 237
+ D NT++ + + ++ + LF + +V+SW + + YV++ EA+
Sbjct: 256 FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEAL 315
Query: 238 DLFKEMVR-GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
++F +M+R G ++PN + IL+AC+ L ++ +AL++M
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNM 375
Query: 297 YSKGGRIENAVAVFEE--ITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVF 354
YSK G + A +F+ + D++SWN++IA H A+ + N+M+ G P+
Sbjct: 376 YSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAV 435
Query: 355 TISSALKACAAVGFKDLGRQLHSCLIKIDT 384
T + L AC+ G + G + L++ ++
Sbjct: 436 TYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 156/358 (43%), Gaps = 65/358 (18%)
Query: 89 HLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVK 148
H+++ Y K G AR+L D+ VV+W+A++SGY+++ A + F +M V
Sbjct: 82 HVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV 141
Query: 149 CNEFTFPSVLKACSIKKDLNM----------------------GRKVHGMSVVTGFDSDG 186
++ I K L + GR M++
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRD 201
Query: 187 FVANTLVV-MYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR 245
V+ T +V AK G++ ++R+LF + +++SWNA+ + Y Q++ EA LF+ M
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM-- 259
Query: 246 GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
P D S N ++ + + +
Sbjct: 260 ----PER---------------------------------DFASWNTMITGFIRNREMNK 282
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC-PNVFTISSALKACA 364
A +F+ + +++SW +I G V+++ N+ AL + ++M G+ PNV T S L AC+
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 365 AVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE--LMPKKDII 420
+ G+Q+H + K + V L++MYSK L AR++++ L+ ++D+I
Sbjct: 343 DLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLI 400
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 39/233 (16%)
Query: 198 KCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKE------------MVR 245
K G++ ++RKLF + VV+W + + Y++ EA +LF MV
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVS 117
Query: 246 GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
G +R + S++ +L RN S N ++D Y++ GRI+
Sbjct: 118 GYLRSKQLSIAEMLFQEMPERN-------------------VVSWNTMIDGYAQSGRIDK 158
Query: 306 AVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
A+ +F+E+ +IVSWN+++ VQ D A+ L M +V + ++ + A
Sbjct: 159 ALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAK 214
Query: 366 VGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
G D R+L C+ + + +I Y++ + +A +++++MP++D
Sbjct: 215 NGKVDEARRLFDCM----PERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 133/307 (43%), Gaps = 43/307 (14%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLY-SKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
+H HL + GF + L+ Y S AR+L D+ +E +VV SW+A++SGY ++
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVV-SWTAMLSGYARS 206
Query: 130 GFGKEALLAFNDM---------CMLG-----------------------VKCNEFTFPSV 157
G A+ F DM +L ++ NE T V
Sbjct: 207 GDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCV 266
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV 217
L AC+ L + + +H + SD FV+N+LV +Y KCG L ++ +F S+
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVR---GGIRPNEFSLSIILNAC--AGL-RNGSXX 271
+WN++ +C+ EA+ +F+EM++ I+P+ + +LNAC GL G
Sbjct: 327 TAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGY 386
Query: 272 XXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQ 330
+ + L+D+ + GR + A+ V + D W +++ C
Sbjct: 387 FDLMTNRFGIEPRIEHY--GCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKI 444
Query: 331 HECNDWA 337
H D A
Sbjct: 445 HGHLDLA 451
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Query: 289 SANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
S A++ Y++ G I NAVA+FE++ D+ SWNA++A C Q+ A++L M +
Sbjct: 195 SWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEP 254
Query: 349 AC-PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
+ PN T+ L ACA G L + +H+ + D SD FV+ L+D+Y KC L +A
Sbjct: 255 SIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEA 314
Query: 408 RRVYELMPKKDI 419
V+++ KK +
Sbjct: 315 SSVFKMASKKSL 326
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Query: 196 YAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV-RGGIRPNEFS 254
YA+ G + ++ LF + V SWNA+ + Q+ +EAV LF+ M+ IRPNE +
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVT 262
Query: 255 LSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT 314
+ +L+ACA D F +N+LVD+Y K G +E A +VF+ +
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMAS 322
Query: 315 HPDIVSWNAVIAGCVQHECNDWALALLNEMKS---SGACPNVFTISSALKACAAVGFKDL 371
+ +WN++I H ++ A+A+ EM + P+ T L AC G
Sbjct: 323 KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSK 382
Query: 372 GR 373
GR
Sbjct: 383 GR 384
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
+LS C + +L L +HA R S D N LV LY KCG A + +++
Sbjct: 266 VLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKS 325
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLG---VKCNEFTFPSVLKACSIKKDLNMGR 171
+ +W+++I+ + +G +EA+ F +M L +K + TF +L AC+ ++ GR
Sbjct: 326 -LTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGR 384
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 138/289 (47%), Gaps = 13/289 (4%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQN 129
EL H+++ +F N L+ ++ CGR R++ D+ D SW+ + G ++
Sbjct: 109 ELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRD-FHSWAIVFLGCIEM 167
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPS-----VLKACSIKKDLNMGRKVHGMSVVTGF-- 182
G ++A F M K F PS VLKAC++ +D +G++VH + GF
Sbjct: 168 GDYEDAAFLFVSMLKHSQK-GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFID 226
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNA-LFSCYVQSDFCVEAVDLFK 241
+ D +++ +L+ Y + L D+ + + + V+W A + + Y + +F E + F
Sbjct: 227 EEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEF-QEVIRDFI 285
Query: 242 EMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXX-XXDQFSANALVDMYSKG 300
EM GI+ N S +L AC+ + +G D L++MY K
Sbjct: 286 EMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKY 345
Query: 301 GRIENAVAVFEEITHPDIVS-WNAVIAGCVQHECNDWALALLNEMKSSG 348
G++++A VF+ VS WNA++A +Q+ A+ LL +MK++G
Sbjct: 346 GKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATG 394
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 5/213 (2%)
Query: 44 SFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGF--SHDPSFRNHLVSLYSKCGRFG 101
+F P +L C + LG ++HA + GF D L+ Y +
Sbjct: 188 AFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLE 247
Query: 102 YARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
A ++ Q + + V +W+A ++ + G +E + F +M G+K N F +VLKAC
Sbjct: 248 DANLVLHQLSNANTV-AWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKAC 306
Query: 162 SIKKDLNM-GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVS- 219
S D G++VH ++ GF+SD + L+ MY K G++ D+ K+F S + VS
Sbjct: 307 SWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSC 366
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNE 252
WNA+ + Y+Q+ +EA+ L +M GI+ ++
Sbjct: 367 WNAMVASYMQNGIYIEAIKLLYQMKATGIKAHD 399
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 11/232 (4%)
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF-SCYVQSDFCVEA---VDLFKEMVR 245
N L++M+ CG+L +R++F + SW +F C D+ A V + K +
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 246 GGIRPNEFSLSIILNACAGLRNGSXXXXXXX--XXXXXXXXXDQFSANALVDMYSKGGRI 303
G + + L +L ACA +R+ D + + +L+ Y + +
Sbjct: 187 GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCL 246
Query: 304 ENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
E+A V ++++ + V+W A + + + EM + G NV S+ LKAC
Sbjct: 247 EDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKAC 306
Query: 364 AAVGFKDLGR---QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
+ V D GR Q+H+ IK+ +SD + LI+MY K + DA +V++
Sbjct: 307 SWVS--DGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFK 356
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 114/253 (45%), Gaps = 8/253 (3%)
Query: 83 DPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDM 142
+P N +++ + G F A +++ VVSW+ +I GY + KEA+L F+ M
Sbjct: 188 NPVTWNVMITGLTNLGDFEKALCFLEK-MPNRTVVSWTTIIDGYARVDKPKEAILLFSRM 246
Query: 143 CML-GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGF-DSDGFVANTLVVMYAKCG 200
+K NE T ++L A DL M VH GF D V N+L+ YAKCG
Sbjct: 247 VACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCG 306
Query: 201 QLGDSRKLFGSIV--APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSII 258
+ + K F I ++VSW + S + EAV +FK+M R G++PN ++ +
Sbjct: 307 CIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISV 366
Query: 259 LNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-H 315
LNAC+ GL D LVDM + GR+E A + EI
Sbjct: 367 LNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIE 426
Query: 316 PDIVSWNAVIAGC 328
V W ++ C
Sbjct: 427 EKAVVWRMLLGAC 439
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 35/225 (15%)
Query: 181 GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP------------------------- 215
GF+S +V LV MY G + D+ K+F +
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 216 ------SVVSWNALFSCYVQSDFCVEAVDLFKEMVR-GGIRPNEFSLSIILNACAGLRNG 268
+VVSW + Y + D EA+ LF MV I+PNE ++ IL A L +
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 269 SX-XXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH--PDIVSWNAVI 325
D N+L+D Y+K G I++A F EI + ++VSW +I
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMI 332
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD 370
+ H A+++ +M+ G PN T+ S L AC+ G +
Sbjct: 333 SAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAE 377
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 71 LHAHLIRFGFSH-DPSFRNHLVSLYSKCGRFGYARKL-VDQSTETDVVVSWSALISGYVQ 128
+HA++ + GF D N L+ Y+KCG A K ++ +VSW+ +IS +
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 129 NGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
+G GKEA+ F DM LG+K N T SVL ACS
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACS 371
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 143/327 (43%), Gaps = 17/327 (5%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVS--LYSKCGRFGYARKLVDQSTE 112
++ +CV+ + +L +H + G R+ L+ S G +A ++ +
Sbjct: 9 MIQKCVSFSQIK---QLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIF-RYIP 64
Query: 113 TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGV------KCNEFTFPSVLKACSIKKD 166
+ W+A+I G+ + A + M + + T LKAC+
Sbjct: 65 KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSC 226
+ ++H G +D + TL+ Y+K G L + KLF + V SWNAL +
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
V + EA++L+K M GIR +E ++ L AC+ L + +
Sbjct: 185 LVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD----VKEGENIFHGYSNDN 240
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEIT-HPDIVSWNAVIAGCVQHECNDWALALLNEMK 345
+NA +DMYSK G ++ A VFE+ T +V+WN +I G H AL + ++++
Sbjct: 241 VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Query: 346 SSGACPNVFTISSALKACAAVGFKDLG 372
+G P+ + +AL AC G + G
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYG 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 10/224 (4%)
Query: 200 GQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGI------RPNEF 253
G L + ++F I P WNA+ + S A ++ M++ R +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
+ S L ACA S D L+D YSK G + +A +F+E+
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
D+ SWNA+IAG V A+ L M++ G + T+ +AL AC+ +G G
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 374 QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+ ++ + V+ IDMYSKC + A +V+E K
Sbjct: 231 NIFHGY----SNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGK 270
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 79 GFSHDPSF-RNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALL 137
G+S+D N + +YSKCG A ++ +Q T VV+W+ +I+G+ +G AL
Sbjct: 235 GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALE 294
Query: 138 AFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANT-----L 192
F+ + G+K ++ ++ + L AC + G +G+SV G N +
Sbjct: 295 IFDKLEDNGIKPDDVSYLAALTACR-----HAGLVEYGLSVFNNMACKGVERNMKHYGCV 349
Query: 193 VVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALF 224
V + ++ G+L ++ + S+ + P V W +L
Sbjct: 350 VDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 166/391 (42%), Gaps = 66/391 (16%)
Query: 49 PISYT-NLLSQCVASKSL-TLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKL 106
P +YT N L C SL ++ + GFS+D N L+ +Y K R A K+
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 107 VDQ---STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
+++ + + +V++++LIS Y ++G EA+ N M G K + FT+ ++L
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE- 395
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVAN-----TLVVMYAKCGQLGDSRKLFGSI----VA 214
G+ MS+ + G N + MY G+ + K+F I ++
Sbjct: 396 ----RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
P +V+WN L + + Q+ E +FKEM R G P
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP------------------------ 487
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI----THPDIVSWNAVIAGCVQ 330
++ + N L+ YS+ G E A+ V+ + PD+ ++N V+A +
Sbjct: 488 -----------ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 331 HECNDWALALLNEMKSSGACPNVFTISSALKACA---AVGF-KDLGRQLHSCLIKIDTDS 386
+ + +L EM+ PN T S L A A +G L +++S +I +
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI----EP 592
Query: 387 DFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+ L+ + SKC++L +A R + + ++
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 129/325 (39%), Gaps = 47/325 (14%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDM---- 142
++S+ K GR A + + E V S+++LIS + +G +EA+ F M
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 143 CML--------------------------------GVKCNEFTFPSVLKACSIKKDLNMG 170
C G+ + +T+ +++ C
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 171 RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV----APSVVSWNALFSC 226
+V GF D N L+ +Y K + ++ K+ +V +PS+V++N+L S
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
Y + EA++L +M G +P+ F+ + +L+ +
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWALALLN 342
+ NA + MY G+ + +F+EI PDIV+WN ++A Q+ + +
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 343 EMKSSGACPNVFTISSALKACAAVG 367
EMK +G P T ++ + A + G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCG 503
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 140/325 (43%), Gaps = 19/325 (5%)
Query: 74 HLIRFGFSHDPSFRNHLVSLYSKCGRFGYA----RKLVDQSTETDVVVSWSALISGYVQN 129
+ R GF + N L+S YS+CG F A R+++D D+ +++ +++ +
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS-TYNTVLAALARG 537
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMS--VVTG-FDSDG 186
G +++ +M K NE T+ S+L A + K++ + +H ++ V +G +
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL---MHSLAEEVYSGVIEPRA 594
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
+ TLV++ +KC L ++ + F + +P + + N++ S Y + +A +
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
M G P+ + + ++ + + D S N ++ Y + R
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 303 IENAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISS 358
+ +A +F E+ + PD++++N I + A+ ++ M G PN T +S
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 359 ALKACAAVGFKDLGRQLHSCLIKID 383
+ + KD + L +D
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDLRNLD 799
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 9/239 (3%)
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLF 240
D V ++ M K G++ + +F + + V S+ +L S + S EAV++F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 241 KEMVRGGIRPNEFSLSIILNACAGLRNG-SXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
K+M G +P + ++ILN + + D ++ N L+ +
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 300 GGRIENAVAVFEEITHP----DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFT 355
G + A VFEE+ D V++NA++ + A+ +LNEM +G P++ T
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 356 ISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELM 414
+S + A A G D +L + + + T D F L+ + + + A ++E M
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 15/284 (5%)
Query: 61 ASKSLTL-GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSW 119
A K+ +L G ++HA + + GF+ + LV YS G YAR++ D++ E +V W
Sbjct: 76 AQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLW 135
Query: 120 SALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVV 179
+A+IS Y +N EA+ F M ++ + L AC+ + MG +++ S+
Sbjct: 136 TAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIK 195
Query: 180 TG--FDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAV 237
D + N+L+ MY K G+ +RKLF + V ++ ++ Y + E++
Sbjct: 196 RKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESL 255
Query: 238 DLFKEMVR------GGIRPNEFSLSIILNAC--AGL-RNGSXXXXXXXXXXXXXXXXDQF 288
+LFK+M I PN+ + +L AC +GL G F
Sbjct: 256 ELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF 315
Query: 289 SANALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQH 331
+VD++ + G +++A ++ P+ V W ++ C H
Sbjct: 316 --GCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLH 357
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 135/307 (43%), Gaps = 12/307 (3%)
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVK-CNEFTFPSVLKACSIKKDLNM-GRKVHGMSVVT 180
+ Y+++G +ALL F + F+ +K S +K ++ GR++H +
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKL 94
Query: 181 GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP-SVVSWNALFSCYVQSDFCVEAVDL 239
GF++ + +LV Y+ G + +R++F ++V W A+ S Y +++ VEA++L
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIEL 154
Query: 240 FKEMVRGGIRPNEFSLSIILNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMY 297
FK M I + +++ L+ACA G D N+L++MY
Sbjct: 155 FKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMY 214
Query: 298 SKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS------SGACP 351
K G E A +F+E D+ ++ ++I G + +L L +MK+ + P
Sbjct: 215 VKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITP 274
Query: 352 NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRV 410
N T L AC+ G + G++ +I G ++D++ + L DA
Sbjct: 275 NDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEF 334
Query: 411 YELMPKK 417
MP K
Sbjct: 335 INQMPIK 341
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 292 ALVDMYSKGGRIENAVAVFEEITHP-DIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
+LV YS G ++ A VF+E +IV W A+I+ ++E + A+ L M++
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTD--SDFFVAVGLIDMYSKCEMLSDAR 408
+ ++ AL ACA +G +G +++S IK D + L++MY K AR
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 409 RVYELMPKKDI 419
++++ +KD+
Sbjct: 225 KLFDESMRKDV 235
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 164/406 (40%), Gaps = 59/406 (14%)
Query: 48 PPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLV 107
P + +LL Q SK+L ++HA L+ G HD S L+ Y C +
Sbjct: 6 PGPRFLSLLQQ--NSKTLIQAKQIHAQLVING-CHDNSLFGKLIGHY--CSK-------- 52
Query: 108 DQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC------------------ 149
STE S S L V FG FN + +KC
Sbjct: 53 -PSTE-----SSSKLAHLLVFPRFGHPDKFLFNTL----LKCSKPEDSIRIFANYASKSS 102
Query: 150 ----NEFTFPSVL---KACSIKKDLNMGRKVHGMSVVTGFDSDG-FVANTLVVMYAKCGQ 201
NE TF VL + L +GR VHGM GF + + TL+ YAK G
Sbjct: 103 LLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGD 162
Query: 202 LGDSRKLFGSIVAPSVVSWNALFSCYVQ-----SDFCVEAVDLFKEM--VRGGIRPNEFS 254
L +RK+F + + V+WNA+ Y + +A+ LF+ G+RP + +
Sbjct: 163 LRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTT 222
Query: 255 LSIILNACA--GLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE 312
+ +L+A + GL D F ALVDMYSK G + NA +VFE
Sbjct: 223 MVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFEL 282
Query: 313 ITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
+ ++ +W ++ G + + LLN M SG PN T +S L A +G + G
Sbjct: 283 MKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEG 342
Query: 373 RQLHSCLIKIDTDSDFFVAVG-LIDMYSKCEMLSDARRVYELMPKK 417
+L + + G ++D+ K + +A + MP K
Sbjct: 343 IELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECND-----WALALL 341
+ L+ Y+K G + A VF+E+ V+WNA+I G H+ A+ L
Sbjct: 147 ELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLF 206
Query: 342 NEMK--SSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID--TDSDFFVAVGLIDM 397
SG P T+ L A + G ++G +H + K+ + D F+ L+DM
Sbjct: 207 RRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDM 266
Query: 398 YSKCEMLSDARRVYELMPKKDI 419
YSKC L++A V+ELM K++
Sbjct: 267 YSKCGCLNNAFSVFELMKVKNV 288
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 130/310 (41%), Gaps = 40/310 (12%)
Query: 56 LSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV 115
L C A+ LG +HAH ++ F +P L+ +Y KC +ARKL D+ + +
Sbjct: 55 LKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNA 114
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLG----------------------------- 146
VV W+A+IS Y G KEA+ + M ++
Sbjct: 115 VV-WNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKM 173
Query: 147 ----VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQL 202
K N T +++ ACS + +++H + + + + LV Y +CG +
Sbjct: 174 IEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSI 233
Query: 203 GDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
+ +F S+ VV+W++L S Y A+ F+EM + P++ + +L AC
Sbjct: 234 VYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKAC 293
Query: 263 --AGLRNGSXXX-XXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH-PDI 318
AGL + + D +S LVD+ S+ GR E A V + + P
Sbjct: 294 SHAGLADEALVYFKRMQGDYGLRASKDHYS--CLVDVLSRVGRFEEAYKVIQAMPEKPTA 351
Query: 319 VSWNAVIAGC 328
+W A++ C
Sbjct: 352 KTWGALLGAC 361
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 136/350 (38%), Gaps = 61/350 (17%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDM-CMLGVKCNEFTFPSVLKACSIKKDLNMGRKVH 174
++S + +S Y G ++AL F M + + F LK+C+ +G VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 175 GMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCV 234
SV + F S+ FV L+ MY KC + +RKLF I + V WNA+ S Y
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN--- 291
EAV+L++ M + PNE S + I+ G +GS +F N
Sbjct: 132 EAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEF----RFKPNLIT 184
Query: 292 --ALVDMYSKGGRIENAVAVFEEI----------THPDI--------------------- 318
ALV S G A + +EI HP +
Sbjct: 185 LLALVSACSAIG----AFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVF 240
Query: 319 --------VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD 370
V+W+++I+ H + AL EM+ + P+ + LKAC+ G D
Sbjct: 241 DSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLAD 300
Query: 371 LGRQLHSCL---IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+ + D + L+D+ S+ +A +V + MP+K
Sbjct: 301 EALVYFKRMQGDYGLRASKDHYSC--LVDVLSRVGRFEEAYKVIQAMPEK 348
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I+ L+S C A + L E+H++ R P ++ LV Y +CG Y + + D
Sbjct: 183 ITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDS 242
Query: 110 STETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS----IKK 165
+ D VV+WS+LIS Y +G + AL F +M + V ++ F +VLKACS +
Sbjct: 243 MEDRD-VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADE 301
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA-PSVVSWNALF 224
L +++ G G + + LV + ++ G+ ++ K+ ++ P+ +W AL
Sbjct: 302 ALVYFKRMQG---DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL 358
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 291 NALVDMYSKGGRIENAVAVFEEI-THPDIVSWNAVIAGCVQHECNDW-ALALLNEMKSSG 348
NA++ Y+ G+++ AV ++E + P+ S+NA+I G V E + A+ +M
Sbjct: 118 NAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFR 177
Query: 349 ACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
PN+ T+ + + AC+A+G L +++HS + + + GL++ Y +C + +
Sbjct: 178 FKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQ 237
Query: 409 RVYELMPKKDII 420
V++ M +D++
Sbjct: 238 LVFDSMEDRDVV 249
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 334 NDWALALLNEMKSSGACP-NVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAV 392
++ AL L +M SS A P + S ALK+CAA LG +H+ +K + S+ FV
Sbjct: 28 HEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGC 87
Query: 393 GLIDMYSKCEMLSDARRVYELMPKKDII 420
L+DMY KC +S AR++++ +P+++ +
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAV 115
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 151/344 (43%), Gaps = 15/344 (4%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+ YT ++ K++ + L + G + N L+ GR+ A +L+
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 110 STETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
E + VV++SALI +V+ G EA +++M + + FT+ S++ +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNA 222
L+ + + + + + NTL+ + K ++ + +LF + + + V++N
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
L Q+ C A +FK+MV G+ P+ + SI+L+
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWAL 338
D ++ N +++ K G++E+ +F ++ P+++ + +I+G + + A
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFK----DLGRQLHSC 378
AL EMK G PN T ++ ++A G K +L +++ SC
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 156/375 (41%), Gaps = 12/375 (3%)
Query: 54 NLLSQCVASKS-LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
N+L C +S L L + + +++ G+ D + L++ Y R A LVDQ
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 113 TDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
+ V+++ LI G + EA+ + M G + + FT+ +V+ + D+++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNALFS 225
+ ++D + T++ + D+ LF + + P+VV++N+L
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX 285
C +A L +M+ I PN + S +++A
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALL 341
D F+ ++L++ + R++ A +FE + P++V++N +I G + + + + L
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
EM G N T ++ ++ G D+ +++ ++ D L+D K
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 402 EMLSDARRVYELMPK 416
L A V+E + K
Sbjct: 479 GKLEKALVVFEYLQK 493
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 8/227 (3%)
Query: 201 QLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
+L D+ LFG +V PS+V +N L S + + + L + M I + +S +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 257 IILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI--- 313
I++N D + ++L++ Y G RI AVA+ +++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 314 -THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
P+ V++N +I G H A+AL++ M + G P++FT + + G DL
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 373 RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
L + K ++D + +ID + ++DA ++ M K I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 115/267 (43%), Gaps = 16/267 (5%)
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS----RKLFGSIVAPSVVS 219
+ L + V G + G++ D ++L+ Y ++ ++ ++F P+ V+
Sbjct: 128 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVT 187
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
+N L + EAV L MV G +P+ F+ ++N +
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECN- 334
D ++D + +A+ +F E+ + P++V++N++I C+ CN
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CL---CNY 303
Query: 335 -DWALA--LLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVA 391
W+ A LL++M PNV T S+ + A G +L+ +IK D D F
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 392 VGLIDMYSKCEMLSDARRVYELMPKKD 418
LI+ + + L +A+ ++ELM KD
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKD 390
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 14/262 (5%)
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV----APSVVSWNA 222
+++G ++ + + D + N L+ + + QL + + G ++ P +V+ ++
Sbjct: 100 ISLGERMQNLRI----SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
L + Y EAV L +M +PN + + +++ S
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVI-AGCVQHECNDWA 337
D F+ +V+ K G I+ A+++ +++ D+V + +I A C ND A
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND-A 274
Query: 338 LALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDM 397
L L EM + G PNV T +S ++ G +L S +I+ + + LID
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 398 YSKCEMLSDARRVYELMPKKDI 419
+ K L +A ++Y+ M K+ I
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSI 356
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 142/342 (41%), Gaps = 12/342 (3%)
Query: 90 LVSLYSKCGRFGYARKLVDQS---TETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
++S + G+ A+++ + + + V ++SALIS Y ++G +EA+ FN M G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 147 VKCNEFTFPSVLKACSIKK-DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS 205
++ N T+ +V+ AC + K G D N+L+ + ++ G +
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 206 RKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA 261
R LF + + V S+N L + A ++ +M I PN S S +++
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 262 CAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPD 317
A D+ S N L+ +Y+K GR E A+ + E+ D
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 318 IVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHS 377
+V++NA++ G + D + EMK PN+ T S+ + + G ++
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 378 CLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+D + LID K ++ A + + M K+ I
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 118/254 (46%), Gaps = 8/254 (3%)
Query: 117 VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGM 176
+++++L++ + G + A F++M ++ + F++ ++L A +++ ++
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399
Query: 177 SVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDF 232
V + +T++ +AK G+ ++ LFG + +A VS+N L S Y +
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR 459
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANA 292
EA+D+ +EM GI+ + + + +L + + +
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 293 LVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSG 348
L+D YSKGG + A+ +F E D+V ++A+I ++ A++L++EM G
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 349 ACPNVFTISSALKA 362
PNV T +S + A
Sbjct: 580 ISPNVVTYNSIIDA 593
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 114/265 (43%), Gaps = 13/265 (4%)
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNA 222
+ + +++ + G+ + + + L+ Y + G ++ +F S+ + P++V++NA
Sbjct: 249 VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308
Query: 223 LF-SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNG--SXXXXXXXXXX 279
+ +C + F EM R G++P+ + + +L C+ R G
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS--RGGLWEAARNLFDEMT 366
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECND 335
D FS N L+D KGG+++ A + ++ P++VS++ VI G + D
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 336 WALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLI 395
AL L EM+ G + + ++ L VG + + + + D L+
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 396 DMYSKCEMLSDARRVYELMPKKDII 420
Y K + ++V+ M ++ ++
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVL 511
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 140/355 (39%), Gaps = 48/355 (13%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I++ +LL+ C L + D N L+ K G+ A +++ Q
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399
Query: 110 STETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
+ VVS+S +I G+ + G EAL F +M LG+ + ++ ++L +
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT---- 455
Query: 167 LNMGRKVHGMSVV-----TGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSV 217
+GR + ++ G D N L+ Y K G+ + +K+F + V P++
Sbjct: 456 -KVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL 514
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA-CAGLRNGSXXXXXXX 276
++++ L Y + EA+++F+E G+R + S +++A C GS
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 277 XXX--------XXXXXXDQFSANALVDM---YSKGGRIENAVAVFEEITHPDIVSWNAVI 325
D F +A +D YS GG + + + +T + N VI
Sbjct: 575 MTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE---GNRVI 631
Query: 326 A--GCVQHECNDWA--------------LALLNEMKSSGACPNVFTISSALKACA 364
G + E N+ L + +M PNV T S+ L AC+
Sbjct: 632 QLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 161/374 (43%), Gaps = 25/374 (6%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+ Y ++ K++ + L + G + N L+ GR+ A +L+
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 110 STETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
E + VV++SALI +V+ G EA +++M + + FT+ S++ +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNA 222
L+ + + + + + NTL+ + K ++ + +LF + + + V++
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
L + Q+ C A +FK+MV G+ P+ + SI+L+
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWAL 338
D ++ N +++ K G++E+ +F ++ P++V++ +++G + + A
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFK----DLGRQLHSCLIKIDTDSDFFVAVGL 394
AL EMK G P+ T ++ ++A G K +L R++ SC D + +GL
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-----IGL 611
Query: 395 IDMYSKCEMLSDAR 408
+ ML D R
Sbjct: 612 V-----TNMLHDGR 620
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 134/315 (42%), Gaps = 16/315 (5%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
+V +S L+S + + M LG+ N +T+ ++ + L++ V
Sbjct: 81 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQSD 231
+ G++ D N+L+ + ++ D+ L G +V P ++N L + +
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
EAV L MV G +P+ + I++N + N
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 292 ALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECN--DWALA--LLNE 343
++D + +A+ +F E+ + P++V++N++I C+ CN W+ A LL++
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CL---CNYGRWSDASRLLSD 316
Query: 344 MKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEM 403
M PNV T S+ + A G +L+ +IK D D F LI+ + +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 404 LSDARRVYELMPKKD 418
L +A+ ++ELM KD
Sbjct: 377 LDEAKHMFELMISKD 391
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 136/342 (39%), Gaps = 11/342 (3%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
L+S +K +F L +Q + + ++S LI+ + + AL M LG
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+ + T S+L ++ + G V G+ D F NTL+ + + ++
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 207 KLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
L +V P +V++ + + + A+ L K+M +G I P + I++A
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 263 AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF----EEITHPDI 318
+N + + + N+L+ GR +A + E +P++
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSC 378
V+++A+I V+ A L +EM P++FT SS + D + +
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 379 LIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+I D + LI + K + + + ++ M ++ ++
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 153/343 (44%), Gaps = 15/343 (4%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+ Y ++ K + + L + G D + L+S GR+ A +L+
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 110 STETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
E + VV++SALI +V+ G EA +++M + + FT+ S++ +
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNA 222
L+ + + + + + +TL+ + K ++ + +LF + + + V++
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
L + Q+ C A +FK+MV G+ PN + +I+L+ +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWAL 338
D ++ N +++ K G++E+ +F ++ P+++++N +I+G + + A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
+LL +MK G PN T ++ ++A +D R+ + LIK
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRA----RLRDGDREASAELIK 597
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 4/209 (1%)
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
P +V+ ++L + Y S +AV L +MV G +P+ F+ + +++ S
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQ 330
D + +V+ K G I+ A+++ +++ D+V +N +I G +
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 331 HECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFV 390
++ D AL L EM + G P+VFT SS + G +L S +I+ + +
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 391 AVGLIDMYSKCEMLSDARRVYELMPKKDI 419
LID + K L +A ++Y+ M K+ I
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 140/317 (44%), Gaps = 20/317 (6%)
Query: 116 VVSWSALISGYVQ-NGFGKEALLAFND-MCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
+V ++ L+S + N F E +++ + M LG+ + +T+ + + L++ V
Sbjct: 83 IVEFNKLLSAVAKMNKF--ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQ 229
+ G++ D ++L+ Y ++ D+ L +V P ++ L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ EAV L +MV+ G +P+ + ++N + D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 290 ANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECN--DWALA--LL 341
N ++D K +++A+ +F E+ + PD+ +++++I+ C+ CN W+ A LL
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS-CL---CNYGRWSDASRLL 316
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
++M PNV T S+ + A G +L+ +IK D D F LI+ +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 402 EMLSDARRVYELMPKKD 418
+ L +A+ ++ELM KD
Sbjct: 377 DRLDEAKHMFELMISKD 393
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/379 (19%), Positives = 147/379 (38%), Gaps = 40/379 (10%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA----RK 105
+ + LLS L + L + G SHD + ++ + + + A K
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
++ E D+V + S+L++GY + +A+ + M +G K + FTF +++ +
Sbjct: 144 MMKLGYEPDIV-TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS----RKLFGSIVAPSVVSWN 221
+ + V G D T+V K G + + +K+ + VV +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
+ + +A++LF EM GIRP+ F+ S +++ S
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD----------- 311
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVIAGCVQHECNDWALALL 341
++ L DM E +P++V+++A+I V+ A L
Sbjct: 312 -------ASRLLSDM-------------IERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
+EM P++FT SS + D + + +I D + LI + K
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 402 EMLSDARRVYELMPKKDII 420
+ + + ++ M ++ ++
Sbjct: 412 KRVEEGMELFREMSQRGLV 430
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 145/334 (43%), Gaps = 25/334 (7%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
L+S GR+ A +L+ E + +V+++ALI +V+ G EA ++DM
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+ + FT+ S++ + L+ +++ V D NTL+ + K ++ D
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDF----CVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
+LF + +V ++ +Q F C A +FK+MV G+ P+ + SI+L+
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 263 AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDI 318
D + +++ K G++++ +F ++ P++
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK----DLGRQ 374
V++N +I+G A ALL +MK G PN T ++ ++A G K +L R+
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 375 LHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
+ SC D + +GL+ ML D R
Sbjct: 601 MRSCRFVGDAST-----IGLV-----ANMLHDGR 624
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 113/261 (43%), Gaps = 12/261 (4%)
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV----APSVVSWNA 222
+++G K+ + +V G + N L+ + + Q+ + L G ++ PS+V+ ++
Sbjct: 105 ISLGEKMQRLEIVHGL----YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
L + Y +AV L +MV G RP+ + + +++ S
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWAL 338
+ + +V+ K G + A+ + ++ D+V +N +I ++ D AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMY 398
L EM++ G PNV T SS + + G QL S +I+ + + LID +
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 399 SKCEMLSDARRVYELMPKKDI 419
K +A ++Y+ M K+ I
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSI 361
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 139/333 (41%), Gaps = 50/333 (15%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFR--NHLVSLYSKCGRFGYARKLV 107
+SY L+ C + L + +++ G P+F N L+ + A L+
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV--PTFYTYNTLIHGLFMENKIEAAEILI 385
Query: 108 DQSTETDVV---VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
+ E +V V+++ LI+GY Q+G K+A ++M G++ +FT+ S++ K
Sbjct: 386 REIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRK 445
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSW 220
++ V G D + NTL+ + G + + L + + P V++
Sbjct: 446 NKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY 505
Query: 221 NALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXX 280
N L EA +L EM R GI+P
Sbjct: 506 NCLMRGLCGEGKFEEARELMGEMKRRGIKP------------------------------ 535
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDW 336
D S N L+ YSK G ++A V +E+ +P ++++NA++ G +++ +
Sbjct: 536 -----DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 590
Query: 337 ALALLNEMKSSGACPNVFTISSALKACAAVGFK 369
A LL EMKS G PN + S ++A + + K
Sbjct: 591 AEELLREMKSEGIVPNDSSFCSVIEAMSNLDAK 623
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 140/344 (40%), Gaps = 21/344 (6%)
Query: 47 KPPISYTNLLSQCVASKSLTLGMELH-AHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
KP I N L Q + + G L + + GF D N ++S GR A +
Sbjct: 257 KPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASE 313
Query: 106 LVDQSTETDVV---VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
++ + E +V VS++ LI G NG + A ++M G+ +T+ +++
Sbjct: 314 VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFG-------SIVAP 215
++ + + G D N L+ Y Q GD++K F + P
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYC---QHGDAKKAFALHDEMMTDGIQP 430
Query: 216 SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXX 275
+ ++ +L + + EA +LF+++V G++P+ ++ +++ + N
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 276 XXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQH 331
D + N L+ G+ E A + E+ PD +S+N +I+G +
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQL 375
A + +EM S G P + T ++ LK + +L +L
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEEL 594
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 24/283 (8%)
Query: 133 KEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTL 192
+ A + + DM + +K N +TF ++ + L + G+ V G NTL
Sbjct: 207 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL 266
Query: 193 VVMYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVE--AVDLFKEMVRG 246
V ++ G++ +R + + + P + ++N + S C E A ++ +EM
Sbjct: 267 VQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW-----MCNEGRASEVLREMKEI 321
Query: 247 GIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
G+ P+ S +I++ C+ + ++ N L+ +IE A
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA 381
Query: 307 VAVFEEITHP----DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSAL-- 360
+ EI D V++N +I G QH A AL +EM + G P FT +S +
Sbjct: 382 EILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 361 -------KACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLID 396
+ + K +G+ + L+ ++T D A+G +D
Sbjct: 442 LCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 150/340 (44%), Gaps = 19/340 (5%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
L++LY+K G+ A ++ E V + ++S +I+G+V+ A F DM G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 147 VKCNEFTFPSVLKA-CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM--YAKCGQLG 203
+K + + +++ A C + NM R + + + + ++ YAK G +
Sbjct: 550 MKPDVILYNNIISAFCGMG---NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 204 DSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
S ++F + P+V ++N L + V+ +AV++ EM G+ NE + + I+
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIV 319
A + + D F+ AL+ K GR+++A+AV +E++ +I
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIP 726
Query: 320 S----WNAVIAGCVQHECNDWALA-LLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQ 374
+N +I G + + W A L+ +MK G P++ T +S + AC+ G + Q
Sbjct: 727 RNSFVYNILIDGWARR-GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ 785
Query: 375 LHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELM 414
+ + + LI +++ + A YE M
Sbjct: 786 TIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM 825
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 112/286 (39%), Gaps = 48/286 (16%)
Query: 80 FSHDPSFRNHL--VSLYSKCGRFGYARKLVDQSTE---TDVVVSWSALISGYVQNGFGKE 134
H P+ R + + Y+K G + ++ D V +++ LI+G V+ ++
Sbjct: 583 LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEK 642
Query: 135 ALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVV 194
A+ ++M + GV NE T+ +++ + D + G D D F L+
Sbjct: 643 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 195 MYAKCGQLGDSRKLFGSIVAPSVVS----WNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
K G++ + + + A ++ +N L + + EA DL ++M + G++P
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
+ + + ++AC SK G + A
Sbjct: 763 DIHTYTSFISAC-----------------------------------SKAGDMNRATQTI 787
Query: 311 EEI----THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
EE+ P+I ++ +I G + + AL+ EMK+ G P+
Sbjct: 788 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 181 GFDSDGFVANTLVVMYAKCGQLGD----SRKLFGSIVAPSVVSWNALFSCYVQSDFCVEA 236
GF L+ +Y K G++ SR + V ++ +++ + + +V+ A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 237 VDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
+F++MV+ G++P+ + I++A G+ N + ++
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 297 YSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
Y+K G + ++ VF+ + P + ++N +I G V+ + A+ +L+EM +G N
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
T + ++ A+VG + + L D D F L+ K + A V +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 413 LMPKKDI 419
M ++I
Sbjct: 719 EMSARNI 725
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 166/397 (41%), Gaps = 22/397 (5%)
Query: 40 QCFQSFTKPPI-SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCG 98
+ QS P I +T +L+ + + L+ + G SHD L+ + +C
Sbjct: 69 EMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCS 128
Query: 99 RFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFP 155
R A L+ + + +V+ +L++G+ Q +EA+ + M G N +
Sbjct: 129 RLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYN 188
Query: 156 SVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA- 214
+V+ +DLN +V G +D NTL+ + G+ D+ +L +V
Sbjct: 189 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 248
Query: 215 ---PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN-----ACAGLR 266
P+V+ + AL +V+ +EA +L+KEM+R + PN F+ + ++N C G
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG-- 306
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIV----SWN 322
D + N L+ + K R+E+ + +F E+T+ +V ++N
Sbjct: 307 ---DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN 363
Query: 323 AVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKI 382
+I G Q + A + N M G P++ T + L G + + L K
Sbjct: 364 TLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKS 423
Query: 383 DTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+ D D +I + + L +A ++ + +K +
Sbjct: 424 EMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 130/319 (40%), Gaps = 11/319 (3%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F + Y +++ ++ L +E+ + + G D N L+S S GR+ A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 105 KLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
+L+ + + V+ ++ALI +V+ G EA + +M V N FT+ S++
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVV--- 218
I L + + + V G D NTL+ + K ++ D KLF + +V
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 219 -SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXX 277
++N L Y Q+ A +F MV G+ P+ + +I+L+
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHEC 333
D + N ++ + +++ A +F +T PD +++ +I+G +
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 334 NDWALALLNEMKSSGACPN 352
A L MK G P+
Sbjct: 480 QREADKLCRRMKEDGFMPS 498
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 150/336 (44%), Gaps = 29/336 (8%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
L+S GR+ A +L+ E + V ++SALI +V+ G EA +++M
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+ + T+ S++ + L+ +++ V D NTL+ + K ++ +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 207 KLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
++F + + + V++N L Q+ C A ++FKEMV G+ PN + + +L+
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 263 AGLRNGSXXXXXXXXXXXXXXXXDQ--FSANALVDMYSKGGRIENAVAVFEEIT----HP 316
+NG + ++ N +++ K G++E+ +F ++ P
Sbjct: 477 C--KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK----DLG 372
D+V++N +I+G + + A AL EMK G PN ++ ++A G + +L
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 594
Query: 373 RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
+++ SC D + +GL+ ML D R
Sbjct: 595 KEMRSCGFAGDAST-----IGLV-----TNMLHDGR 620
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 166/397 (41%), Gaps = 17/397 (4%)
Query: 35 VVSNSQCFQSFTKPPISYT-NLLSQCVASKS-LTLGMELHAHLIRFGFSHDPSFRNHLVS 92
V+S + Q+ P YT ++L C +S L L + + +++ G+ + + L++
Sbjct: 100 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN 159
Query: 93 LYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKC 149
Y R A LVDQ T V+++ LI G + EA+ + M G +
Sbjct: 160 GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP 219
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
+ T+ V+ + D ++ + + + NT++ K + D+ LF
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 210 GSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL 265
+ + P+VV++++L SC +A L +M+ I P+ F+ S +++A +
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF--V 337
Query: 266 RNGSXXXXXXXXXXXXXXXXDQ--FSANALVDMYSKGGRIENAVAVFEEITH----PDIV 319
+ G D + ++L++ + R++ A +FE + PD+V
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 320 SWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL 379
++N +I G +++ + + + EM G N T + ++ G D+ +++ +
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 380 IKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPK 416
+ + L+D K L A V+E + +
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 181 GFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEA 236
G + + + L+ + + QL + + G ++ P++V+ ++L + Y S EA
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 237 VDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
V L +M G +PN + + +++ S D + +V+
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 297 YSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
K G + A + ++ P ++ +N +I G +++ D AL L EM++ G PN
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYE 412
V T SS + G +L S +I+ + D F LID + K L +A ++Y+
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 413 LMPKKDI 419
M K+ I
Sbjct: 351 EMVKRSI 357
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 142/316 (44%), Gaps = 20/316 (6%)
Query: 116 VVSWSALISGYVQ-NGFGKEALLAFND-MCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
++ +S L+S + N F + +++ + M LG+ N +T+ ++ + L + V
Sbjct: 81 IIEFSKLLSAIAKMNKF--DVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS----RKLFGSIVAPSVVSWNALFSCYVQ 229
G + G++ + ++L+ Y ++ ++ ++F + P+ V++N L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ EA+ L MV G +P+ + +++N +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 290 ANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECN--DWALA--LL 341
N ++D K +++A+ +F+E+ P++V+++++I+ C+ CN W+ A LL
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS-CL---CNYGRWSDASRLL 314
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
++M P+VFT S+ + A G +L+ ++K D LI+ +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 402 EMLSDARRVYELMPKK 417
+ L +A++++E M K
Sbjct: 375 DRLDEAKQMFEFMVSK 390
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 162/376 (43%), Gaps = 29/376 (7%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
+ Y+ ++ + + + L + G D + L+S GR+ A +L+
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 110 STETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
E + VV++++LI + + G EA F++M + N T+ S++ +
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNA 222
L+ +++ + V D NTL+ + K ++ D +LF + + + V++
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXX--XXXXX 280
L + Q+ C A +FK+MV G+ PN + + +L+ +NG
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC--KNGKLEKAMVVFEYLQK 478
Query: 281 XXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDW 336
D ++ N + + K G++E+ +F ++ PD++++N +I+G + +
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 337 ALALLNEMKSSGACPNVFTISSALKACAAVGFK----DLGRQLHSCLIKIDTDSDFFVAV 392
A L +MK G P+ T ++ ++A G K +L +++ SC D +
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST-----Y 593
Query: 393 GLIDMYSKCEMLSDAR 408
GL+ +ML D R
Sbjct: 594 GLV-----TDMLHDGR 604
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 145/361 (40%), Gaps = 47/361 (13%)
Query: 54 NLLSQCVASKS-LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
N++ C+ +S L+ + + +++ G+ N L++ + R A LVDQ E
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 113 TDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD--- 166
V+++ L+ G Q+ EA+ M + G + + T+ +V+ + +
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 167 -LNMGRKVH--------------------------GMSVVTGFDSDG-----FVANTLVV 194
LN+ K+ +++ T D+ G F ++L+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 195 MYAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
G+ D+ +L + + P+VV++N+L + + +EA LF EM++ I P
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
N + + ++N D + N L++ + K ++ + + +F
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 311 EEITHPDI----VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAV 366
+++ + V++ +I G Q D A + +M S G PN+ T ++ L
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 367 G 367
G
Sbjct: 464 G 464
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 120/260 (46%), Gaps = 11/260 (4%)
Query: 105 KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA-CSI 163
K+ E DVV+ +S +I + +AL F +M G++ + FT+ S++ C+
Sbjct: 230 KMEKGKIEADVVI-YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA----PSVVS 219
+ + R + M + + + N+L+ +AK G+L ++ KLF ++ P++V+
Sbjct: 289 GRWSDASRLLSDM-LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXX 279
+N+L + + D EA +F MV P+ + + ++N +
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 280 XXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECND 335
+ + L+ + + +NA VF+++ HP+I+++N ++ G ++ +
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 336 WALALLNEMKSSGACPNVFT 355
A+ + ++ S P+++T
Sbjct: 468 KAMVVFEYLQKSKMEPDIYT 487
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 108/249 (43%), Gaps = 8/249 (3%)
Query: 179 VTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCV 234
+ G + + N ++ + QL + + G ++ PS+V+ N+L + + +
Sbjct: 93 ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
EAV L +MV G +P+ + + +++ S D + A++
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 295 DMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
+ K G + A+ + ++ D+V ++ VI ++ D AL L EM + G
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
P+VFT SS + G +L S +++ + + LID ++K L +A ++
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 411 YELMPKKDI 419
++ M ++ I
Sbjct: 333 FDEMIQRSI 341
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 8/227 (3%)
Query: 201 QLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
+L ++ LFG +V PS+V ++ L S + + ++M G+ N ++ +
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 257 IILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-- 314
I++N S + N+L++ + G RI AVA+ +++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 315 --HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
PD V++ ++ G QH A+AL+ M G P++ T + + G DL
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 373 RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
L + + K ++D + +ID K + DA ++ M K I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 139/317 (43%), Gaps = 20/317 (6%)
Query: 116 VVSWSALISGYVQ-NGFGKEALLAFND-MCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
+V +S L+S + F + +++F + M +LGV N +T+ ++ + L+ +
Sbjct: 65 IVEFSKLLSAIAKMKKF--DLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQ 229
G + G+ N+L+ + ++ ++ L +V P V++ L Q
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ EAV L + MV G +P+ + ++N D
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 290 ANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECN--DWALA--LL 341
+ ++D K +++A+ +F E+ + PD+ +++++I+ C+ CN W+ A LL
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS-CL---CNYGRWSDASRLL 298
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
++M PNV T +S + A A G +L +I+ D + LI+ +
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 402 EMLSDARRVYELMPKKD 418
+ L +A++++ LM KD
Sbjct: 359 DRLDEAQQIFTLMVSKD 375
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 144/334 (43%), Gaps = 25/334 (7%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
L+S GR+ A +L+ E + +V+++ALI +V+ G EA +DM
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+ + FT+ S++ + L+ +++ V D NTL+ + K ++ D
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDF----CVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
+LF + +V ++ +Q F C A +FK+MV G+ P+ + SI+L+
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 263 AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDI 318
D + +++ K G++++ +F ++ P++
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFK----DLGRQ 374
V++N +I+G A ALL +MK G P+ T ++ ++A G K +L R+
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 375 LHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
+ SC D + +GL+ ML D R
Sbjct: 526 MRSCRFVGDAST-----IGLV-----ANMLHDGR 549
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 158/419 (37%), Gaps = 47/419 (11%)
Query: 48 PPI-SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLV-------------SL 93
P I + LLS K L + L + R G SH+ N L+ +L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 94 YSKCGRFGY----------------------ARKLVDQSTETDV---VVSWSALISGYVQ 128
K + GY A LVDQ E ++++ LI G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 129 NGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFV 188
+ EA+ + M G + N T+ V+ + D+++ + ++D +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 189 ANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMV 244
NT++ K + D+ LF + + P+VV++++L SC +A L +M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 245 RGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
I PN + + +++A D F+ N+L++ + R++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 305 NAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSAL 360
A +FE + PD+ ++N +I G + + + L EM G + T ++ +
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 361 KACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+ G D +++ ++ D L+D L A V++ M K +I
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 152/351 (43%), Gaps = 17/351 (4%)
Query: 23 TTSRTIVDSQTNVVSNSQCFQSFTKPPI-SYTNLLSQCVASKSLTLGMELHAHLIRFGFS 81
+T R+ ++ + + + QS P I ++ +LS+ SK+ L + L H+ G
Sbjct: 42 STKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIG 101
Query: 82 HDPSFRNHLVSLYSKCGRFGYARKLVDQ----STETDVVVSWSALISGYVQNGFGKEALL 137
HD N +++ +C RF A +V + E D VV+ S+LI+G+ Q +A+
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD-VVTVSSLINGFCQGNRVFDAID 160
Query: 138 AFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYA 197
+ M +G + + + +++ +N ++ G +D N+LV
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 198 KCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEF 253
G+ D+ +L +V P+V+++ A+ +V+ EA+ L++EM R + P+ F
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 254 SLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI 313
+ + ++N D + N L++ + K R++ +F E+
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 314 THP----DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSAL 360
D +++N +I G Q D A + + M S PN+ T S L
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILL 388
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 14/295 (4%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVV---VSWSALIS 124
+EL + R G D N LV+ GR+ A +L+ D+V ++++A+I
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 125 GYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS 184
+V+ G EA+ + +M V + FT+ S++ + ++ +++ + V G
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 185 DGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVV----SWNALFSCYVQSDFCVEAVDLF 240
D NTL+ + K ++ + KLF + +V ++N + Y Q+ A ++F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 241 KEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKG 300
M RPN + SI+L D + N ++ K
Sbjct: 373 SRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 301 GRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACP 351
G +E+A +F ++ PD+VS+ +I+G + D + L +M+ G P
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 113/275 (41%), Gaps = 8/275 (2%)
Query: 154 FPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV 213
F VL + K+ ++ + V G D + N ++ +C + + + G ++
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 214 ----APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGS 269
P VV+ ++L + + Q + +A+DL +M G RP+ + I++ + +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 270 XXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVI 325
D + N+LV GR +A + ++ P+++++ AVI
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 326 AGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTD 385
V+ A+ L EM P+VFT +S + G D +Q+ ++
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 386 SDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
D LI+ + K + + + +++ M ++ ++
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 95/216 (43%), Gaps = 6/216 (2%)
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR 266
K+ S PS+V ++ + S +S + LF M GI + +S +I++N
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWN 322
D + ++L++ + +G R+ +A+ + ++ PD+V +N
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 323 AVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA-CAAVGFKDLGRQLHSCLIK 381
+I G + + A+ L + M+ G + T +S + C + + D R + +++
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 382 IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
D + +ID++ K S+A ++YE M ++
Sbjct: 239 -DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 138/320 (43%), Gaps = 11/320 (3%)
Query: 45 FTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR 104
F+ + YT L+ C + +L + + G + L++ K G
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF 253
Query: 105 KLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
++ ++ E V + +++ +++ ++G K+A F++M GV CN T+ +++
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS----RKLFGSIVAPSV 217
+ LN KV G + + NTL+ + G+LG + R L ++PS+
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXX 277
V++N L S + + A + KEM GI+P++ + +I+++ A N
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHEC 333
D + + L+ + G++ A +F+ + P+ V +N +I G +
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 334 NDWALALLNEMKSSGACPNV 353
+ AL LL EM+ PNV
Sbjct: 494 SYRALKLLKEMEEKELAPNV 513
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 194 VMYAKCGQLGDSRKLFGSIV-------APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRG 246
++ C + G+ K F ++ +P+VV + L + +A DLF EM +
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 247 GIRPNEFSLSIILNACAGLRNG--SXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIE 304
G+ NE + ++++N +NG + ++ N +++ K GR +
Sbjct: 228 GLVANERTYTVLINGL--FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 305 NAVAVFEEITHP----DIVSWNAVIAG-CVQHECNDWALALLNEMKSSGACPNVFTISSA 359
+A VF+E+ +IV++N +I G C + + N+ A ++++MKS G PN+ T ++
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNE-ANKVVDQMKSDGINPNLITYNTL 344
Query: 360 LKACAAVGFKDLGRQLHSC 378
+ VG LG+ L C
Sbjct: 345 IDGFCGVG--KLGKALSLC 361
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 146/339 (43%), Gaps = 55/339 (16%)
Query: 94 YSKCGRFGYARKLVDQSTE---TDVVVSWSALISGYVQNGFGKEALLA-FNDMCMLGVKC 149
YS+ G++ A L ++ E + +V+++ ++ + + G +L ++M G+K
Sbjct: 220 YSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF 279
Query: 150 NEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF 209
+EFT +VL AC+ + L ++ G++ N L+ ++ K G ++ +
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 210 GSIVAPSV----VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGL 265
+ S V++N L + YV++ F EA + + M + G+ PN + + +
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV------- 392
Query: 266 RNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSW 321
+D Y K G+ + A+ +F + P+ ++
Sbjct: 393 ----------------------------IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTY 424
Query: 322 NAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKD----LGRQLHS 377
NAV++ + ++ + +L +MKS+G PN T ++ L C G + R++ S
Sbjct: 425 NAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKS 484
Query: 378 CLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPK 416
C + D D F LI Y +C DA ++Y M +
Sbjct: 485 C--GFEPDRDTFNT--LISAYGRCGSEVDASKMYGEMTR 519
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 135/346 (39%), Gaps = 58/346 (16%)
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEA 135
GF D N L+S Y +CG A K+ + T V +++AL++ + G +
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 136 LLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG------FVA 189
+DM G K E ++ S++ C K G G+ + +G +
Sbjct: 546 ENVISDMKSKGFKPTETSY-SLMLQCYAK-----GGNYLGIERIENRIKEGQIFPSWMLL 599
Query: 190 NTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVR 245
TL++ KC L S + F P +V +N++ S + +++ +A + + +
Sbjct: 600 RTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 246 GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
G+ P D + N+L+DMY + G
Sbjct: 660 DGLSP-----------------------------------DLVTYNSLMDMYVRRGECWK 684
Query: 306 AVAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALK 361
A + + + PD+VS+N VI G + A+ +L+EM G P +FT ++ +
Sbjct: 685 AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Query: 362 ACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDA 407
A+G + C+ K D + ++D Y + S+A
Sbjct: 745 GYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 144/378 (38%), Gaps = 52/378 (13%)
Query: 53 TNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
+ +LS C L E A L G+ N L+ ++ K G + A ++ + E
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 113 TDVV---VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
V+++ L++ YV+ GF KEA M GV N T+ +V+ A
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA--------- 395
Query: 170 GRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNALFS 225
Y K G+ ++ KLF S+ P+ ++NA+ S
Sbjct: 396 --------------------------YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 226 CYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXX 285
+ E + + +M G PN + + +L C
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 286 DQFSANALVDMYSKGGRIENAVAVFEEITHPD----IVSWNAVIAGCVQHECNDWALA-- 339
D+ + N L+ Y + G +A ++ E+T + ++NA++ + DW
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK--GDWRSGEN 547
Query: 340 LLNEMKSSGACPNVFTISSALKACAAVGFKDLG-RQLHSCLIKIDTDSDFFVAVGLIDMY 398
++++MKS G P + S L+ C A G LG ++ + + + + + L+
Sbjct: 548 VISDMKSKGFKPTETSYSLMLQ-CYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLAN 606
Query: 399 SKCEMLSDARRVYELMPK 416
KC L+ + R + L K
Sbjct: 607 FKCRALAGSERAFTLFKK 624
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 144/325 (44%), Gaps = 51/325 (15%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVV---VSWSALISGYVQNGFGKEALLAFNDMCM 144
N ++ +YS+ G+F A++LVD + V +S++ LI+ +++G G LA + M
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSG-GLTPNLAVELLDM 287
Query: 145 L---GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ 201
+ G++ + T+ ++L ACS +D N+ DG V
Sbjct: 288 VRNSGLRPDAITYNTLLSACS--RDSNL---------------DGAV------------- 317
Query: 202 LGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSI 257
K+F + A P + ++NA+ S Y + EA LF E+ G P+ + +
Sbjct: 318 -----KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNS 372
Query: 258 ILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT--- 314
+L A A RN D+ + N ++ MY K G+++ A+ +++++
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 315 --HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
+PD +++ +I + A AL++EM G P + T S+ + A G ++
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 373 RQLHSCLIKIDTDSDFFVAVGLIDM 397
SC+++ T D ++D+
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDV 517
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 127/301 (42%), Gaps = 16/301 (5%)
Query: 50 ISYTNLLSQCVASKSLT--LGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLV 107
IS+ L++ + S LT L +EL + G D N L+S S+ A K+
Sbjct: 261 ISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVF 320
Query: 108 D----QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
+ + D+ +++A+IS Y + G EA F ++ + G + T+ S+L A +
Sbjct: 321 EDMEAHRCQPDLW-TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR 379
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA-----PSVV 218
+++ ++V+ GF D NT++ MY K GQL + +L+ + P +
Sbjct: 380 ERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAI 439
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
++ L +++ VEA L EM+ GI+P + S ++ A
Sbjct: 440 TYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECN 334
D + + ++D+ +G A ++ ++ P + +I G ++ +
Sbjct: 500 LRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRS 559
Query: 335 D 335
D
Sbjct: 560 D 560
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 11/296 (3%)
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEA 135
GF HD +V + +FG KL+D+ V+++ LI Y + + EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 136 LLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM 195
+ FN M G K + T+ +++ + L++ ++ G D F + ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 196 YAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPN 251
K G L + KLF +V P++V++N + + ++ A+ L+++M G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 252 EFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE 311
+ + SI++ D+ LVD++ K G +E A ++
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 312 EITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
+ H P++ + N++++ ++ A LL M + G P++ T + L C
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 21 IHTTSR-TIVDSQTNVVSNSQCFQSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRF 78
IH+ R ++ NV + Q ++ KP ++Y L+ + L + M+++ +
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQ--EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKL----VDQSTETDVVVSWSALISGYVQNGFGKE 134
G S D + +++ K G A KL VDQ T +V+++ ++ + + +
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC-TPNLVTYNIMMDLHAKARNYQN 522
Query: 135 ALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVV 194
AL + DM G + ++ T+ V++ L V + D V LV
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 195 MYAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
++ K G + + + + +++ P+V + N+L S +++ + EA +L + M+ G+RP
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 251 NEFSLSIILNACAGLRN 267
+ + +++L+ C R+
Sbjct: 643 SLQTYTLLLSCCTDGRS 659
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 11/296 (3%)
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEA 135
GF HD +V + +FG KL+D+ V+++ LI Y + + EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 136 LLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM 195
+ FN M G K + T+ +++ + L++ ++ G D F + ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 196 YAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPN 251
K G L + KLF +V P++V++N + + ++ A+ L+++M G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 252 EFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE 311
+ + SI++ D+ LVD++ K G +E A ++
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 312 EITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
+ H P++ + N++++ ++ A LL M + G P++ T + L C
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 21 IHTTSR-TIVDSQTNVVSNSQCFQSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRF 78
IH+ R ++ NV + Q ++ KP ++Y L+ + L + M+++ +
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQ--EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKL----VDQSTETDVVVSWSALISGYVQNGFGKE 134
G S D + +++ K G A KL VDQ T +V+++ ++ + + +
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC-TPNLVTYNIMMDLHAKARNYQN 522
Query: 135 ALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVV 194
AL + DM G + ++ T+ V++ L V + D V LV
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 195 MYAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
++ K G + + + + +++ P+V + N+L S +++ + EA +L + M+ G+RP
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 251 NEFSLSIILNACAGLR 266
+ + +++L+ C R
Sbjct: 643 SLQTYTLLLSCCTDGR 658
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 11/296 (3%)
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEA 135
GF HD +V + +FG KL+D+ V+++ LI Y + + EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 136 LLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM 195
+ FN M G K + T+ +++ + L++ ++ G D F + ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 196 YAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPN 251
K G L + KLF +V P++V++N + + ++ A+ L+++M G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 252 EFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE 311
+ + SI++ D+ LVD++ K G +E A ++
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 312 EITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
+ H P++ + N++++ ++ A LL M + G P++ T + L C
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 21 IHTTSR-TIVDSQTNVVSNSQCFQSFTKPP-ISYTNLLSQCVASKSLTLGMELHAHLIRF 78
IH+ R ++ NV + Q ++ KP ++Y L+ + L + M+++ +
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQ--EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAG 463
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKL----VDQSTETDVVVSWSALISGYVQNGFGKE 134
G S D + +++ K G A KL VDQ T +V+++ ++ + + +
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC-TPNLVTYNIMMDLHAKARNYQN 522
Query: 135 ALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVV 194
AL + DM G + ++ T+ V++ L V + D V LV
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 195 MYAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
++ K G + + + + +++ P+V + N+L S +++ + EA +L + M+ G+RP
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 251 NEFSLSIILNACAGLR 266
+ + +++L+ C R
Sbjct: 643 SLQTYTLLLSCCTDGR 658
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 144/347 (41%), Gaps = 46/347 (13%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE-- 112
+++ C + L+L +I+ G+ D + L++ GR A +LVD+ E
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 113 -TDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA-CSIKKD---L 167
+++ +AL++G NG +A+L + M G + NE T+ VLK C + +
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 168 NMGRKVHGMSV-------------------------------VTGFDSDGFVANTLVVMY 196
+ RK+ + + GF +D + TL+ +
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 197 AKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNE 252
G+ D KL + + P VV+++AL C+V+ EA +L KEM++ GI P+
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 253 FSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE 312
+ + +++ + + N L++ Y K I++ + +F +
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 313 ITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFT 355
++ D V++N +I G + + A L EM S P++ +
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 114/285 (40%), Gaps = 10/285 (3%)
Query: 142 MCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ 201
M + G+ N +T ++ C + L++ G + G++ D +TL+ G+
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 202 LGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSI 257
+ ++ +L +V P++++ NAL + + +AV L MV G +PNE +
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 258 ILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT--- 314
+L + D + ++D K G ++NA +F E+
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 315 -HPDIVSWNAVIAG-CVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
DI+ + +I G C +D A LL +M P+V S+ + G
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGA-KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 373 RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+LH +I+ D LID + K L A + +LM K
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 118/295 (40%), Gaps = 11/295 (3%)
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEA 135
GF D L+ + GR+ KL+ + + VV++SALI +V+ G +EA
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 136 LLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM 195
+M G+ + T+ S++ + L+ + + V G + N L+
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 196 YAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPN 251
Y K + D +LF + V V++N L + + A +LF+EMV +RP+
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 252 EFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE 311
S I+L+ D N ++ ++++A +F
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 312 EI----THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
+ PD+ ++N +I G + A L +M+ G PN T + ++A
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
P ++ ++ LFS ++ +DL K+M GI N ++LSI++N C R S
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE---EITH-PDIVSWNAVIAG-CV 329
D + + L++ GR+ A+ + + E+ H P +++ NA++ G C+
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 330 QHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG----FKDLGRQLHSCLIKID 383
+ +D A+ L++ M +G PN T LK G +L R++ IK+D
Sbjct: 190 NGKVSD-AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 131/325 (40%), Gaps = 13/325 (4%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYA----RK 105
+ + LLS L + L + G SHD + ++ + + + A K
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
++ E D+V + S+L++GY + +A+ + M +G K + FTF +++ +
Sbjct: 144 MMKLGYEPDIV-TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWN 221
+ + V G D T+V K G + + L + + +VV +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
+ + AVDLF EM GIRPN + + ++N S
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWA 337
+ + NAL+D + K G++ A + EE+ PD +++N +I G H D A
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA 382
Query: 338 LALLNEMKSSGACPNVFTISSALKA 362
+ M S PN+ T ++ +
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLING 407
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 137/329 (41%), Gaps = 14/329 (4%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCM 144
N L++ GR+ A +L+ E + VV+++ALI + + G EA +M
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
+ + T+ ++ + L+ +++ V + NTL+ + KC ++ D
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 205 SRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
+LF + + + V++ + + Q+ C A +FK+MV + + + SI+L+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 261 ACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT-HPDIV 319
+ F N +++ K G++ A +F ++ PD+V
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVV 536
Query: 320 SWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCL 379
++N +I+G A L +MK G PN T ++ ++A +D R + L
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA----NLRDCDRAASAEL 592
Query: 380 IKIDTDSDFFVAVGLIDMYSKCEMLSDAR 408
IK S F I + + ML D R
Sbjct: 593 IKEMRSSGFVGDASTISLVTN--MLHDGR 619
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 167/387 (43%), Gaps = 20/387 (5%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDP-SFRN--HLVSLYSKCGRFGYARKL 106
++ ++LL+ SK ++ + L ++ G+ D +F H + L++K A L
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE---AVAL 210
Query: 107 VDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
VDQ + +V++ +++G + G AL N M +K N F +++ +
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVS 219
+ + + + G + N+L+ G+ D+ +L ++ + P+VV+
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA-CAGLRNGSXXXXXXXXX 278
+NAL + + VEA L +EM++ I P+ + ++++N C R
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP----DIVSWNAVIAGCVQHECN 334
Q + N L++ + K R+E+ V +F E++ + V++ +I G Q
Sbjct: 391 SKDCLPNIQ-TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 335 DWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGL 394
D A + +M S+ ++ T S L + G D + L K + + + F+ +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 395 IDMYSKCEMLSDARRVY-ELMPKKDII 420
I+ K + +A ++ L K D++
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLSIKPDVV 536
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 135/317 (42%), Gaps = 20/317 (6%)
Query: 116 VVSWSALISGYVQ-NGFGKEALLAFND-MCMLGVKCNEFTFPSVLKACSIKKDLNMGRKV 173
+V ++ L+S + N F E +++ + M LG+ + +T+ + + L++ V
Sbjct: 83 IVEFNKLLSAVAKMNKF--ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 174 HGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQ 229
+ G++ D ++L+ Y ++ D+ L +V P ++ L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 230 SDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFS 289
+ EAV L +MV+ G +P+ + ++N + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 290 ANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECN--DWALA--LL 341
N ++D K +E AV +F E+ P++V++N++I C+ CN W+ A LL
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI-NCL---CNYGRWSDASRLL 316
Query: 342 NEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKC 401
+ M PNV T ++ + A G +LH +I+ D D LI+ +
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 402 EMLSDARRVYELMPKKD 418
L +A+++++ M KD
Sbjct: 377 NRLDEAKQMFKFMVSKD 393
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 92/209 (44%), Gaps = 4/209 (1%)
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
P +V+ ++L + Y S +AV L +MV G +P+ F+ + +++ S
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 275 XXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQ 330
D + +V+ K G I+ A+ + ++ ++V +N +I +
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 331 HECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFV 390
+ + A+ L EM++ G PNV T +S + G +L S +++ + +
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 391 AVGLIDMYSKCEMLSDARRVYELMPKKDI 419
LID + K L +A +++E M ++ I
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 127/296 (42%), Gaps = 46/296 (15%)
Query: 71 LHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYV 127
L ++ +GF D +++ K G A L + E ++ VV +S +I
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
++G +AL FN+M M G+K + T+ S++ + G K+ + D
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEM 243
+ L+ ++ K G+L ++++L+ + +AP +++N+L + + + EA +F M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 244 VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRI 303
V G P+ + SI++N+ Y K R+
Sbjct: 377 VSKGCEPDIVTYSILINS-----------------------------------YCKAKRV 401
Query: 304 ENAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFT 355
++ + +F EI+ P+ +++N ++ G Q + A L EM S G P+V T
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 125/269 (46%), Gaps = 13/269 (4%)
Query: 104 RKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSI 163
R+++ ++ DVV ++SALI +V+ G EA +N+M G+ + T+ S++
Sbjct: 304 REMIGRNIIPDVV-TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 164 KKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVS 219
+ L+ ++ + V G + D + L+ Y K ++ D +LF I + P+ ++
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 220 WNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACA--GLRNGSXXXXXXXX 277
+N L + QS A +LF+EMV G+ P+ + I+L+ G N +
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENAVAVF----EEITHPDIVSWNAVIAGCVQHEC 333
+ N ++ ++++A ++F ++ PD+V++N +I G +
Sbjct: 483 KSRMTLGIGIY--NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKA 362
A L +MK G P+ FT + ++A
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 119/284 (41%), Gaps = 16/284 (5%)
Query: 146 GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS 205
G++ + +T ++ KK L V G + G++ D +TLV + G++ ++
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 206 RKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA 261
L +V P +V+ + L + EA+ L MV G +P+E + +LN
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 262 CAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPD 317
N + + ++D K G ++A+++F E+ D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 318 IVSWNAVIAGCVQHECND--W--ALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
+V+++++I G CND W +L EM P+V T S+ + G +
Sbjct: 280 VVTYSSLIGGL----CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 374 QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+L++ +I D LID + K L +A ++++LM K
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 142/351 (40%), Gaps = 28/351 (7%)
Query: 28 IVDSQTNVVSN--SQCFQSFTKP-PISYTNLLSQCVASKSLTL------GMELHAHLIRF 78
IVD + N + QS P PI + L S +K L GMEL+
Sbjct: 46 IVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN------ 99
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS----TETDVVVSWSALISGYVQNGFGKE 134
G HD +++ Y + + +A ++ ++ E D + ++S L++G+ G E
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTI-TFSTLVNGFCLEGRVSE 158
Query: 135 ALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVV 194
A+ + M + + + T +++ +K ++ + V GF D ++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 195 MYAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
K G + LF + + SVV ++ + + +A+ LF EM GI+
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
+ + S ++ D + +AL+D++ K G++ A ++
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 311 EEITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTIS 357
E+ PD +++N++I G + C A + + M S G P++ T S
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 125/285 (43%), Gaps = 12/285 (4%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLA-FNDMCML 145
L++ Y + GR+ + +L+D+ + +++++ +I+ + G E LL F +M
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 146 GVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDS 205
G++ + T+ ++L AC+I+ + V G D + LV + K +L
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 206 RKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA 261
L G + + P + S+N L Y +S EA+ +F +M G PN + S++LN
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 262 CAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF----EEITHPD 317
D + N L++++ +GG + V +F EE PD
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Query: 318 IVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
+ ++ +I C + ++ A +L M ++ P+ + ++A
Sbjct: 422 METYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEA 466
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 141/339 (41%), Gaps = 39/339 (11%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
++SL + G ++ D+ V V S++ALI+ Y +NG + +L + M
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+ + T+ +V+ AC+ G D +G L+ ++A+ G
Sbjct: 207 ISPSILTYNTVINACA----------------RGGLDWEG-----LLGLFAEMRHEG--- 242
Query: 207 KLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLR 266
+ P +V++N L S EA +F+ M GGI P+ + S ++ LR
Sbjct: 243 ------IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 267 NGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWN 322
D S N L++ Y+K G I+ A+ VF ++ P+ +++
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 323 AVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVG-FKDLGRQLHSCLIK 381
++ Q D L EMKSS P+ T + ++ G FK++ H +++
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD-MVE 415
Query: 382 IDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ + D G+I K + DAR++ + M DI+
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIV 454
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 117/265 (44%), Gaps = 9/265 (3%)
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
L++Q + DV+ +++ LI G +N +EA + M G++ + +T+ +++
Sbjct: 277 LIEQGPKPDVI-TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLF----GSIVAPSVVSWN 221
+ + ++ G +V GF D F +L+ G+ + LF G + P+V+ +N
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
L +EA L EM G+ P + +I++N + S
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEI----THPDIVSWNAVIAGCVQHECNDWA 337
D F+ N L+ YS ++ENA+ + + + PD+ ++N+++ G + +
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 338 LALLNEMKSSGACPNVFTISSALKA 362
+ M G PN+FT + L++
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLES 540
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 45/261 (17%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
VV++ ++ G+ + F E F M GV TF +L+ K D+ K+
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQSD 231
+ G + F N + + G+L + ++ G ++ P V+++N L ++
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
EA +MV G+ P D ++ N
Sbjct: 301 KFQEAEVYLGKMVNEGLEP-----------------------------------DSYTYN 325
Query: 292 ALVDMYSKGGRIENAV-----AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
L+ Y KGG ++ A AVF PD ++ ++I G + ALAL NE
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 347 SGACPNVFTISSALKACAAVG 367
G PNV ++ +K + G
Sbjct: 385 KGIKPNVILYNTLIKGLSNQG 405
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 136/373 (36%), Gaps = 47/373 (12%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I+Y NL+ + ++ G D N L++ Y K G A ++V
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 110 STETDVV---VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
+ V ++ +LI G G AL FN+ G+K N + +++K S +
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 167 L--------NMGRK------------VHGM---------------SVVTGFDSDGFVANT 191
+ M K V+G+ + G+ D F N
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 192 LVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
L+ Y+ ++ ++ ++ + V P V ++N+L + ++ + ++ +K MV G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 248 IRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAV 307
PN F+ +I+L + R D + L+D + K G ++ A
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 308 AVFEEITHPDIVS-----WNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
+F ++ VS +N +I + A L EM P+ +T +
Sbjct: 587 TLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 363 CAAVGFKDLGRQL 375
G +LG +
Sbjct: 647 FCKTGNVNLGYKF 659
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 147/358 (41%), Gaps = 11/358 (3%)
Query: 73 AHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQN 129
+++ G+ D + N L+ G+ A LVD+ E VV+++++++G ++
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 130 GFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVA 189
G AL M VK + FT+ +++ + ++ + G S
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 190 NTLVVMYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVR 245
N+LV K G+ D L +V+ P+V+++N L +V+ EA +L+KEM+
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 246 GGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIEN 305
GI PN + + +++ S D + +L+ Y R+++
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 306 AVAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALK 361
+ VF I+ + V+++ ++ G Q A L EM S G P+V T L
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 362 ACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
G + ++ L K D + +I+ K + DA ++ +P K +
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 126/288 (43%), Gaps = 15/288 (5%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDVV---VSWSALISGYVQNGFGKEALLAFNDMCM 144
N LV K G++ L+ ++V ++++ L+ +V+ G +EA + +M
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
G+ N T+ +++ ++ L+ + + V D +L+ Y ++ D
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 205 SRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
K+F +I + + V+++ L + QS A +LF+EMV G+ P+ + I+L+
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 261 ACAGLRNGSXXXXXXXXXXXXXXXXDQ--FSANALVDMYSKGGRIENAVAVFEEI----T 314
NG D +++ KGG++E+A +F +
Sbjct: 447 GLCD--NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 315 HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKA 362
P+++++ +I+G + A LL +M+ G PN T ++ ++A
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 148/344 (43%), Gaps = 12/344 (3%)
Query: 88 NHLVSLYSKCGRFGYAR---KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCM 144
N + L+ K G+ A K+++Q VV ++ ++ + + A F++M
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
G++ N FT+ ++ KD V + F+++ + NT++ K GQ
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 205 SRKLFGSIVAP-----SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
++++ +++ S S+N++ +V+ AV+ ++EM G PN + + ++
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH---- 315
N D + AL+D + K ++ A +F E+
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 316 PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQL 375
P++ +N++I+G D A+ L +M + G ++FT ++ + G +L L
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 376 HSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+S L+ + D + + L++ SK A ++ E M KKD+
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 146/372 (39%), Gaps = 50/372 (13%)
Query: 77 RFGFSHDPSFRNHLVSLYSKCGRFGYARK----LVDQSTETDVVVSWSALISGYVQNGFG 132
RFGF P N+L++ Y + R YA +VD+ V + ++S V++
Sbjct: 162 RFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKV-VPFVPYVNNVLSSLVRSNLI 220
Query: 133 KEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTL 192
EA +N M ++GV + T +++A ++ K+ + G + DG + +
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 193 VVMYAKCGQLGDS----RKLFGSIVAP-SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
V K L + R++ G + P S ++ ++ +V+ EAV + EMV G
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 248 IRPNEFSLSIILNA-CAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA 306
I + + + ++N C G G D+ + +V+ + K +E A
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGK-ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 307 VAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALLNE------------------- 343
+ + + P V + +I GC++ E + AL + N+
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 344 ---------------MKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDF 388
M+ G PNV ++ + A + DL R + S +++ + +
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 389 FVAVGLIDMYSK 400
F LID + K
Sbjct: 520 FTYSILIDGFFK 531
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 150/368 (40%), Gaps = 23/368 (6%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
I Y+ L+ C L + ++ +I G + D N LV+ K G+ A + +
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 573
Query: 110 STETDVV---VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
T ++ VS+ LI+GY +G G +A F++M +G FT+ S+LK
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 167 LNMGRK----VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVV---- 218
L K +H + D + NTL+ K G L + LFG +V S++
Sbjct: 634 LREAEKFLKSLHAVPAAV----DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEM-VRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXX 277
++ +L S + V A+ KE RG + PN+ + ++
Sbjct: 690 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 749
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHEC 333
D + NA++D YS+ G+IE + E+ + P++ ++N ++ G + +
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 334 NDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVG 393
+ L + +G P+ T S + ++G ++ I + D +
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 869
Query: 394 LIDMYSKC 401
LI SKC
Sbjct: 870 LI---SKC 874
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 164/426 (38%), Gaps = 29/426 (6%)
Query: 14 LSFKPQTIHTTSRTIVD---SQTNVVSNSQCF-----QSFTKPPISYTNLLSQCVASKSL 65
LSF H T ++D S+ N + F + T +SY LL +
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424
Query: 66 TLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSAL 122
L + + R G ++ K G A L+++ ++ + +V++SAL
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGF 182
I+G+ + G K A + +G+ N + +++ C L +++ ++ G
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544
Query: 183 DSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVD 238
D F N LV K G++ ++ + + + P+ VS++ L + Y S ++A
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604
Query: 239 LFKEMVRGGIRPNEFSLSIILNA-CAG--LRNGSXXXXXXXXXXXXXXXXDQFSANALVD 295
+F EM + G P F+ +L C G LR D N L+
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE---KFLKSLHAVPAAVDTVMYNTLLT 661
Query: 296 MYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSG-AC 350
K G + AV++F E+ PD ++ ++I+G + A+ E ++ G
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
PN + + G G + + D +ID YS+ + +
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR---MGKIEKT 778
Query: 411 YELMPK 416
+L+P+
Sbjct: 779 NDLLPE 784
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 12/244 (4%)
Query: 181 GFDSDGFVANTLVVMYAKCGQLGDS----RKLFGSIVAPSVVSWNALFSCYVQSDFCVEA 236
G D+D N L+ + ++ R + ++ P+ V++N L + + + A
Sbjct: 298 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357
Query: 237 VDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
L EM+ G+ PN + + +++ N + S L+D
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 297 YSKGGRIENAVAVFEEITHPDI----VSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
K + A + + + +++ +I G ++ D A+ LLNEM G P+
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEM--LSDARRV 410
+ T S+ + VG +++ + ++ + + LI Y+ C M L +A R+
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI--YNCCRMGCLKEAIRI 535
Query: 411 YELM 414
YE M
Sbjct: 536 YEAM 539
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 142/323 (43%), Gaps = 13/323 (4%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGR----FGYARK 105
I +T LL+ K + + L HL G SHD N L++ + + + + K
Sbjct: 73 IDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGK 132
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
++ E D+V ++++LI+G+ +EA+ N M +G+K + + +++ +
Sbjct: 133 MMKLGFEPDIV-TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWN 221
+N + G D + +LV G+ D+ L + + P V+++N
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXX 281
AL +V+ ++A +L+ EM+R I PN F+ + ++N
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 282 XXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDI----VSWNAVIAGCVQHECNDWA 337
D + +L++ + K ++++A+ +F E++ + +++ +I G Q + A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 338 LALLNEMKSSGACPNVFTISSAL 360
+ + M S G PN+ T + L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLL 394
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 149/364 (40%), Gaps = 22/364 (6%)
Query: 39 SQCFQSFTKPPI-SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKC 97
+Q + KP + YT ++ + + + L + +G D LV+
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 98 GRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTF 154
GR+ A L+ T+ + V++++ALI +V+ G +A +N+M + + N FT+
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 155 PSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-- 212
S++ ++ ++ R++ + G D +L+ + KC ++ D+ K+F +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 213 --VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSX 270
+ + +++ L + Q A ++F MV G+ PN + +++L+ NG
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC--YNGKV 403
Query: 271 XXXXXXXXXXXXXXXDQ-----FSANALVDMYSKGGRIENAVAVFEEITHPDIVSWNAVI 325
D ++ N L+ G++E A+ VFE++ ++
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 326 AGCVQHECN----DWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIK 381
+Q C A+ L + S G PNV T ++ + G K + H K
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLK---HEAHVLFRK 520
Query: 382 IDTD 385
+ D
Sbjct: 521 MKED 524
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 105/249 (42%), Gaps = 8/249 (3%)
Query: 179 VTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCV 234
+ G D + N L+ + + Q + G ++ P +V++ +L + + +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 235 EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALV 294
EA+ + +MV GI+P+ + I+++ + + D +LV
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 295 DMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGAC 350
+ GR +A ++ +T PD++++NA+I V+ A L NEM
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 351 PNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRV 410
PN+FT +S + G D RQ+ + D LI+ + KC+ + DA ++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 411 YELMPKKDI 419
+ M +K +
Sbjct: 340 FYEMSQKGL 348
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 147/355 (41%), Gaps = 16/355 (4%)
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVV--SWSALISGYVQNGFGKEAL 136
G H + V + K ++ ++ V++ +V + + ++ + G +EA+
Sbjct: 116 GHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAV 175
Query: 137 LAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMY 196
F+ + G++ N + +L +K + R V + + + + N + +
Sbjct: 176 GIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV-LLQLKSHITPNAHTFNIFIHGW 234
Query: 197 AKCGQLGDS----RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNE 252
K ++ ++ +++ G P V+S+ + CY Q ++ ++ EM G PN
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 253 FSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE 312
+ + I+++ + D N L+ ++ GR+E A VF
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF-R 353
Query: 313 ITHPDI------VSWNAVIAGCVQHECNDWALALLNEMKSSGAC-PNVFTISSALKACAA 365
+ P++ ++N++IA H+ D A+ LL EM+SS C P+V T L++C
Sbjct: 354 VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 366 VG-FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
G ++G+ L + K D LI + M A ++E M +DI
Sbjct: 414 RGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDI 468
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 147/355 (41%), Gaps = 16/355 (4%)
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVV--SWSALISGYVQNGFGKEAL 136
G H + V + K ++ ++ V++ +V + + ++ + G +EA+
Sbjct: 116 GHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAV 175
Query: 137 LAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMY 196
F+ + G++ N + +L +K + R V + + + + N + +
Sbjct: 176 GIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVV-LLQLKSHITPNAHTFNIFIHGW 234
Query: 197 AKCGQLGDS----RKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNE 252
K ++ ++ +++ G P V+S+ + CY Q ++ ++ EM G PN
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 253 FSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEE 312
+ + I+++ + D N L+ ++ GR+E A VF
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF-R 353
Query: 313 ITHPDI------VSWNAVIAGCVQHECNDWALALLNEMKSSGAC-PNVFTISSALKACAA 365
+ P++ ++N++IA H+ D A+ LL EM+SS C P+V T L++C
Sbjct: 354 VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 366 VG-FKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
G ++G+ L + K D LI + M A ++E M +DI
Sbjct: 414 RGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDI 468
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 128/296 (43%), Gaps = 11/296 (3%)
Query: 79 GFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEA 135
GF HD +V + +FG KL+D+ V+++ LI Y + + KEA
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 136 LLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVM 195
+ FN M G + + T+ +++ + L++ ++ G D F + ++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 196 YAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPN 251
K G L + +LF +V P++V++N + + + ++ A+ L+++M G +P+
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 252 EFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENA----V 307
+ + SI++ D+ LVD++ K G ++ A
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 308 AVFEEITHPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKAC 363
A+ + P++ + N++++ ++ A LL M + G P++ T + L C
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCC 649
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 127/313 (40%), Gaps = 49/313 (15%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV----VVSWSALI 123
+EL + FG D N L+ + K A ++ V VV+++++I
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 124 SGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD 183
SGY + G +EA +DM LG+ TF
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTF----------------------------- 315
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDL 239
N LV YAK G++ + ++ G +++ P VV++ +L Y + + L
Sbjct: 316 ------NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Query: 240 FKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
++EM G+ PN F+ SI++NA F N ++D + K
Sbjct: 370 WEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Query: 300 GGRIENAVAVFEEIT----HPDIVSWNAVIAG-CVQHECNDWALALLNEMKSSGACPNVF 354
G++ A + EE+ PD +++ +I G C++ + A+++ ++M + G P+
Sbjct: 430 AGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE-AVSIFHKMVAIGCSPDKI 488
Query: 355 TISSALKACAAVG 367
T+SS L G
Sbjct: 489 TVSSLLSCLLKAG 501
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 9/219 (4%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR----K 105
++YT+++S + + L ++R G N LV Y+K G A K
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
++ D VV++++LI GY + G + + +M G+ N FT+ ++ A +
Sbjct: 338 MISFGCFPD-VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWN 221
L R++ G F+ N ++ + K G++ ++ + + P +++
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
L + EAV +F +MV G P++ ++S +L+
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 127/313 (40%), Gaps = 49/313 (15%)
Query: 68 GMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV----VVSWSALI 123
+EL + FG D N L+ + K A ++ V VV+++++I
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 124 SGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFD 183
SGY + G +EA +DM LG+ TF
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTF----------------------------- 315
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDL 239
N LV YAK G++ + ++ G +++ P VV++ +L Y + + L
Sbjct: 316 ------NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Query: 240 FKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
++EM G+ PN F+ SI++NA F N ++D + K
Sbjct: 370 WEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Query: 300 GGRIENAVAVFEEIT----HPDIVSWNAVIAG-CVQHECNDWALALLNEMKSSGACPNVF 354
G++ A + EE+ PD +++ +I G C++ + A+++ ++M + G P+
Sbjct: 430 AGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE-AVSIFHKMVAIGCSPDKI 488
Query: 355 TISSALKACAAVG 367
T+SS L G
Sbjct: 489 TVSSLLSCLLKAG 501
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 9/219 (4%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYAR----K 105
++YT+++S + + L ++R G N LV Y+K G A K
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 106 LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKK 165
++ D VV++++LI GY + G + + +M G+ N FT+ ++ A +
Sbjct: 338 MISFGCFPD-VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 166 DLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVVSWN 221
L R++ G F+ N ++ + K G++ ++ + + P +++
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 222 ALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
L + EAV +F +MV G P++ ++S +L+
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 146/328 (44%), Gaps = 22/328 (6%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQ 109
++Y +L L+ EL + + G + N+LV Y K G A ++V+
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 110 STETDVVV---SWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
+T+V+ +++ LI+G G +E L + M L ++ + T+ +++ C
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC----- 355
Query: 167 LNMGRKVHGMSVVTGFDSDGFVAN------TLVVMYAKCGQLGDSRKLFGSI----VAPS 216
+G + ++ ++DG AN +L + + + +RK+ + +P
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 217 VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXX 276
+V+++ L Y++ A+++ +EM + GI+ N +L+ IL+A R
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 277 XXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHE 332
D+ + L+ + + ++E A+ +++E+ P + ++N++I G H
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 333 CNDWALALLNEMKSSGACPNVFTISSAL 360
+ A+ +E+ SG P+ T +S +
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSII 563
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 23/326 (7%)
Query: 50 ISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRN---HLVSLYSKCG---RFGYA 103
++Y L+ C LG+ L A + +D N H +SL C R
Sbjct: 346 VTYNTLIDGC-----FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 104 RK---LVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKA 160
RK LVD + +V++ LI Y++ G AL +M G+K N T ++L A
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Query: 161 CSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPS 216
++ L+ + + GF D TL++ + + ++ + +++ + + P+
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520
Query: 217 VVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSL-SIILNACAGLRNGSXXXXXX 275
V ++N+L A++ F E+ G+ P++ + SIIL C R
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR-VEKAFEFY 579
Query: 276 XXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFE---EITHPDIVSWNAVIAGCVQHE 332
D ++ N L++ K G E A+ F E D V++N +I+ + +
Sbjct: 580 NESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDK 639
Query: 333 CNDWALALLNEMKSSGACPNVFTISS 358
A LL+EM+ G P+ FT +S
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNS 665
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 119/317 (37%), Gaps = 27/317 (8%)
Query: 123 ISGYVQNGFGKEALLAFNDMCMLGVKCNEFT----------FPSVLKACSIKKDLNMGRK 172
+S Y+ G AL F M L +K N T +PS S R+
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS-------ARE 190
Query: 173 VHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA-----PSVVSWNALFSCY 227
V V G + N LV Y G+L D+ + +V+ P V++N +
Sbjct: 191 VFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAM 250
Query: 228 VQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQ 287
+ + +L +M + G+ PN + + ++ L + D
Sbjct: 251 SKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDL 310
Query: 288 FSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWALALLNE 343
+ N L++ G + + + + + PD+V++N +I GC + + A L+ +
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ 370
Query: 344 MKSSGACPNVFTISSALK-ACAAVGFKDLGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCE 402
M++ G N T + +LK C + + R++ + D LI Y K
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Query: 403 MLSDARRVYELMPKKDI 419
LS A + M +K I
Sbjct: 431 DLSGALEMMREMGQKGI 447
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 125/289 (43%), Gaps = 11/289 (3%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCM 144
N +++LY K + + KL + + +++AL++ + + G ++A F +
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
G++ + + + +++++ S ++ + G + D N +V Y + G D
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 205 SRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
+ +F + +AP++ S L S Y ++ + + KEM G+ P+ F L+ +LN
Sbjct: 410 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 469
Query: 261 ACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----P 316
L + D + N L+++Y K G +E +F E+ P
Sbjct: 470 LYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP 529
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
D+V+W + I + + L + EM SG P+ T L AC++
Sbjct: 530 DVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS 578
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 98/261 (37%), Gaps = 45/261 (17%)
Query: 47 KPPI-SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGR-FGYAR 104
KP I +YT L++ E+ L G D N L+ YS+ G +G A
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 105 ---KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
+ E D S++ ++ Y + G +A F +M LG+ + +L A
Sbjct: 378 IFSLMQHMGCEPDRA-SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAY 436
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI--------- 212
S +D+ + G + D FV N+++ +Y + GQ K+ +
Sbjct: 437 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 496
Query: 213 ------------------------------VAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
P VV+W + Y + V+ +++F+E
Sbjct: 497 STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 556
Query: 243 MVRGGIRPNEFSLSIILNACA 263
M+ G P+ + ++L+AC+
Sbjct: 557 MIDSGCAPDGGTAKVLLSACS 577
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 133/314 (42%), Gaps = 12/314 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+Y+ L+ C + +E+ H+ + +++ K G+ AR+L+
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Query: 111 TETDVV----VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKD 166
E + +S++++I G+ + G A+ A+ +MC G+ N T+ S++
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 167 LNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVA----PSVVSWNA 222
++ ++ G D L+ + K + + LF ++ PS +N+
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 223 LFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
L S + V A+DL+K+M++ G+R + + + +++ N
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWAL 338
D+ +V+ SK G+ V +FEE+ P+++ +NAVIAG + D A
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 339 ALLNEMKSSGACPN 352
L +EM G P+
Sbjct: 815 RLHDEMLDKGILPD 828
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 145/344 (42%), Gaps = 12/344 (3%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCM 144
N ++S K G+ A +L+ + + VVS++ ++ G+ + A + F+++
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
G+K N +T+ ++ C D +V + + +G V T++ K GQ
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 205 SRKLFGSIVAP-----SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
+R+L +++ S +S+N++ + + AV ++EM GI PN + + ++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF----EEITH 315
N D + AL+D + K +E+A A+F EE +
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 316 PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQL 375
P +N++I+G AL L +M G ++ T ++ + G L +L
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 376 HSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
++ + + D + +++ SK +++E M K ++
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 151/367 (41%), Gaps = 50/367 (13%)
Query: 78 FGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDVVVSWSAL---ISGYVQNGFGKE 134
FGF + N+L++ YSK + +A +V+Q E DV+ + + +S VQ E
Sbjct: 157 FGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTE 216
Query: 135 ALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFV------ 188
A ++ M +GV + T +++A ++ +V ++ G + D +
Sbjct: 217 AKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQ 276
Query: 189 ----------ANTL--------------------VVMYAKCGQLGDSRKLFGSI----VA 214
AN+L ++ K G + D+ +L + ++
Sbjct: 277 ACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGIS 336
Query: 215 PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXX 274
+VV+ +L + + +++ V A+ LF +M + G PN + S+++ +NG
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR--KNGEMEKAL 394
Query: 275 X--XXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHPDIVSW---NAVIAGCV 329
F + ++ + KG + E A+ +F+E + + N +++
Sbjct: 395 EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLC 454
Query: 330 QHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKIDTDSDFF 389
+ D A LL++M+S G PNV + ++ + DL R + S +++ + +
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 390 VAVGLID 396
LID
Sbjct: 515 TYSILID 521
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 7/231 (3%)
Query: 41 CFQSFTKPPISYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRF 100
C + I+YT+L++ + + +E+ + G D L+ + K
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 101 GYARKLVDQSTETDVVVS---WSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSV 157
A L + E + S +++LISG+ G AL + M G++C+ T+ ++
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 158 LKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----V 213
+ +L + +++ G D + +V +K GQ K+F + V
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 214 APSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAG 264
P+V+ +NA+ + + + EA L EM+ GI P+ + I+++ G
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVG 841
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 125/289 (43%), Gaps = 11/289 (3%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCM 144
N +++LY K + + KL + + +++AL++ + + G ++A F +
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
G++ + + + +++++ S ++ + G + D N +V Y + G D
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 205 SRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
+ +F + +AP++ S L S Y ++ + + KEM G+ P+ F L+ +LN
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
Query: 261 ACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----P 316
L + D + N L+++Y K G +E +F E+ P
Sbjct: 448 LYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP 507
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAA 365
D+V+W + I + + L + EM SG P+ T L AC++
Sbjct: 508 DVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSS 556
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 98/261 (37%), Gaps = 45/261 (17%)
Query: 47 KPPI-SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGR-FGYAR 104
KP I +YT L++ E+ L G D N L+ YS+ G +G A
Sbjct: 296 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 105 ---KLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
+ E D S++ ++ Y + G +A F +M LG+ + +L A
Sbjct: 356 IFSLMQHMGCEPDRA-SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAY 414
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI--------- 212
S +D+ + G + D FV N+++ +Y + GQ K+ +
Sbjct: 415 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 474
Query: 213 ------------------------------VAPSVVSWNALFSCYVQSDFCVEAVDLFKE 242
P VV+W + Y + V+ +++F+E
Sbjct: 475 STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 534
Query: 243 MVRGGIRPNEFSLSIILNACA 263
M+ G P+ + ++L+AC+
Sbjct: 535 MIDSGCAPDGGTAKVLLSACS 555
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 45/342 (13%)
Query: 88 NHLVSLYSKCGRF----GYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLAFNDMC 143
N +V+ Y K G Y K+V+ + D ++++LI GY Q A FN+M
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFF-TYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 144 MLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDS--DGFVANTLVVMYAKCGQ 201
+ G + NE + + +HG+ V D D FV
Sbjct: 281 LKGCRRNEVAYTHL---------------IHGLCVARRIDEAMDLFV------------- 312
Query: 202 LGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNA 261
K+ P+V ++ L S+ EA++L KEM GI+PN + ++++++
Sbjct: 313 -----KMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 262 CAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPD 317
+ + NAL++ Y K G IE+AV V E + P+
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 318 IVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHS 377
++N +I G + + A+ +LN+M P+V T +S + G D +L S
Sbjct: 428 TRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 378 CLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
+ D + +ID K + + +A +++ + +K +
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 117/280 (41%), Gaps = 19/280 (6%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
V +++ LI + EAL +M G+K N T+ ++ + + R++ G
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCG---------QLGDSRKLFGSIVAPSVVSWNALFSC 226
+ G + N L+ Y K G +L +SRKL +P+ ++N L
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL-----SPNTRTYNELIKG 437
Query: 227 YVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXD 286
Y +S+ +A+ + +M+ + P+ + + +++ N D
Sbjct: 438 YCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 287 QFSANALVDMYSKGGRIENAVAVFEEI----THPDIVSWNAVIAGCVQHECNDWALALLN 342
Q++ +++D K R+E A +F+ + +P++V + A+I G + D A +L
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 343 EMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKI 382
+M S PN T ++ + A G L ++KI
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 126/291 (43%), Gaps = 14/291 (4%)
Query: 84 PSFR--NHLVSLYSKCG---RFGYARKLVDQSTETDVVVSWSALISGYVQNGFGKEALLA 138
P+ R N L+ Y K G K++++ DVV ++++LI G ++G A
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVV-TYNSLIDGQCRSGNFDSAYRL 484
Query: 139 FNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAK 198
+ M G+ +++T+ S++ + K + + G + + + L+ Y K
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 199 CGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFS 254
G++ ++ + +++ P+ +++NAL EA L ++MV+ G++P +
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 255 LSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT 314
+I+++ + D + + Y + GR+ +A + ++
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 315 H----PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALK 361
PD+ +++++I G ++A +L M+ +G P+ T S +K
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 144/342 (42%), Gaps = 15/342 (4%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDVV---VSWSALISGYVQNGFGKEALLAFNDMCMLG 146
++SL+++ G A + E ++ V ++ LI GY + G A+ N+M G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+ T+ ++L +K L K+ D + L+ + K G L ++
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 207 KLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
+LF + + VV++N L + + A +++ +MV I P S SI++NA
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 263 AGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDI 318
+ + N+++ Y + G + + E++ PD
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 319 VSWNAVIAGCVQHECNDWALALLNEMKSS--GACPNVFTISSALKA-CAAVGFKDLGRQL 375
+S+N +I G V+ E A L+ +M+ G P+VFT +S L C K+ L
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 376 HSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+I+ + D +I+ + + L++A R+++ M ++
Sbjct: 681 RK-MIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/344 (18%), Positives = 132/344 (38%), Gaps = 46/344 (13%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCM 144
N +V+ K G+ + Q E V +V+++ LIS Y G +EA N M
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
G +T+ +V+ ++V + +G D +L++ K G + +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 205 SRKLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILN 260
+ K+F + V P +V ++++ S + +S +A+ F + G+ P+ +I++
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 261 ACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITHP---- 316
Y + G I A+ + E+
Sbjct: 419 G-----------------------------------YCRKGMISVAMNLRNEMLQQGCAM 443
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLH 376
D+V++N ++ G + + A L NEM P+ +T++ + +G +L
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 377 SCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDII 420
+ + D L+D + K + A+ ++ M K+I+
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 9/189 (4%)
Query: 184 SDGFVANTLVVMYAKCGQLGDSRKLFGSIVAP----SVVSWNALFSCYVQSDFCVEAVDL 239
S+ V + L+ Y + +L ++ + F + + S+ + NAL V+ + A +
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 240 FKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSK 299
++E+ R G+ N ++L+I++NA D + N L+ YS
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 300 GGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFT 355
G +E A + + P + ++N VI G +H + A + EM SG P+ T
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 356 ISSAL-KAC 363
S L +AC
Sbjct: 343 YRSLLMEAC 351
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 121/304 (39%), Gaps = 49/304 (16%)
Query: 58 QCVASK--SLTLGMELHAHLIRFGFS--------HDPSFRNHLVSLYSKCGRFGYARKLV 107
+CV K S+ G+ LH L F ++ P N ++ L K +F A L+
Sbjct: 115 RCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLI 174
Query: 108 DQSTETDVVVS---WSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIK 164
D +V +S ++ LI YV+ G EA+ FN M G ++ F V+
Sbjct: 175 DLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS----- 229
Query: 165 KDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALF 224
N+ RK + FDS L D P V+ + L
Sbjct: 230 ---NLSRKRRASEAQSFFDS-----------------LKDR-------FEPDVIVYTNLV 262
Query: 225 SCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXX 284
+ ++ EA +FKEM GI PN ++ SI+++A S
Sbjct: 263 RGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCA 322
Query: 285 XDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWALAL 340
+ + N L+ ++ K GR E + V+ ++ PD +++N +I + E + A+ +
Sbjct: 323 PNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKV 382
Query: 341 LNEM 344
LN M
Sbjct: 383 LNTM 386
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 213 VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXX 272
V S+ ++ L YV++ EAV F M G P++ + SI+++ + R S
Sbjct: 182 VEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRAS--- 238
Query: 273 XXXXXXXXXXXXXDQFSANA-----LVDMYSKGGRIENAVAVFEEIT----HPDIVSWNA 323
D+F + LV + + G I A VF+E+ P++ +++
Sbjct: 239 ---EAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSI 295
Query: 324 VIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSCLIKID 383
VI + A + +M SG PN T ++ ++ G + Q+++ + K+
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Query: 384 TDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKK 417
+ D LI+ + + E L +A +V M KK
Sbjct: 356 CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 125/276 (45%), Gaps = 15/276 (5%)
Query: 90 LVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
L+S R+ A +L+ E + VV+++ALI +V+ G EA +++M
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSR 206
+ + FT+ S++ + L+ + + + + + NTL+ + K ++ +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 207 KLFGSI----VAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNAC 262
+LF + + + V++ L + Q+ C A +FK+MV G+ PN + + +L+
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 263 AGLRNGSXXXXXXXXXXXXXXXXDQ--FSANALVDMYSKGGRIENAVAVFEEIT----HP 316
+NG + ++ N +++ K G++E+ +F ++ P
Sbjct: 481 C--KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 317 DIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
D++ +N +I+G + + A AL +M+ G P+
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 138/337 (40%), Gaps = 13/337 (3%)
Query: 51 SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQS 110
+ LLS K L + L + R G SH+ N L++ + + + A L+ +
Sbjct: 87 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 111 TETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDL 167
+ +V+ S+L++GY +A+ + M +G + + TF +++ +
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 168 NMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCY 227
+ + V G + +V K G + + L + A + + ++S
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 228 VQSDFCV-----EAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXX 282
+ S C +A++LF EM G+RPN + S +++ S
Sbjct: 267 IDS-LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 283 XXXDQFSANALVDMYSKGGRIENAVAVFEEITH----PDIVSWNAVIAGCVQHECNDWAL 338
+ + NAL+D + K G++ A +++E+ PDI +++++I G H+ D A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 339 ALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQL 375
+ M S PNV T ++ + D G +L
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 122/285 (42%), Gaps = 8/285 (2%)
Query: 142 MCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQ 201
M LG+ N +T+ ++ + +++ + G + G++ ++L+ Y +
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 202 LGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSI 257
+ D+ L +V P +++ L + EAV L MV+ G +PN + +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 258 ILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEI---- 313
++N + + + ++D K ++A+ +F E+
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGR 373
P++++++++I+ +E A LL++M PNV T ++ + A G
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 374 QLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKD 418
+L+ +IK D D F LI+ + + L +A+ ++ELM KD
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 8/227 (3%)
Query: 201 QLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
+L D+ LFG +V PS+ +N L S + + L ++M R GI N ++ +
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 257 IILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH- 315
I++N S + ++L++ Y G RI +AVA+ +++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 316 ---PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
PD +++ +I G H A+AL++ M G PN+ T + G DL
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 373 RQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
L + + +++ + +ID K DA ++ M K +
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/396 (17%), Positives = 147/396 (37%), Gaps = 82/396 (20%)
Query: 54 NLLSQCVASKS-LTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTE 112
N+L C +S ++L + L +++ G+ + L++ Y R A LVDQ E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 113 TDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNM 169
++++ LI G + EA+ + M G + N T+ V+ + D+++
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 170 G------------------------------RKVHGMSVVTGFDSDGFVAN-----TLVV 194
+ +++ T ++ G N +L+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 195 MYAKCGQLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRP 250
+ D+ +L ++ P+VV++NAL +V+ VEA L+ EM++ I P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 251 NEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVF 310
+ F+ S ++N + + N L++ + K RI+ V +F
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 311 EEIT---------------------------------------HPDIVSWNAVIAGCVQH 331
E++ HP+I+++N ++ G ++
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 332 ECNDWALALLNEMKSSGACPNVFTISSALKACAAVG 367
+ A+ + ++ S P ++T + ++ G
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 55 LLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETD 114
L C KSL ++H H ++ F DP N ++S++ +C A+++ D + D
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 115 VVVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMG---- 170
+ SW ++ Y NG G +AL F +M G+K NE TF +V AC+ +
Sbjct: 302 MD-SWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHF 360
Query: 171 ---RKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI-VAPSVVSWNALFSC 226
+ HG+S T + ++ ++ + KCG L ++ + + P+ W A+ +
Sbjct: 361 DSMKNEHGISPKT----EHYLG--VLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN- 413
Query: 227 YVQSDFCVEAVDLFKEMV 244
Y + ++ D +E++
Sbjct: 414 YARLHGDIDLEDYMEELM 431
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 128 QNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGF 187
Q K+A+ + M +C F + ++C+ K L +KVH + + F D
Sbjct: 217 QRRLYKDAIELLDKGAMPDREC----FVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPK 272
Query: 188 VANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGG 247
+ N ++ M+ +C + D++++F +V + SW+ + Y + +A+ LF+EM + G
Sbjct: 273 LNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG 332
Query: 248 IRPNEFSLSIILNACA 263
++PNE + + ACA
Sbjct: 333 LKPNEETFLTVFLACA 348
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 46/303 (15%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGY 126
E + +IR G D L+ + K G A K + D+ V++++A+ISG+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
Q G EA F++M G++ + TF ++
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING-------------------------- 430
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEAVDLFKE 242
Y K G + D+ ++ ++ +P+VV++ L + A +L E
Sbjct: 431 ---------YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
M + G++PN F+ + I+N N D + L+D Y K G
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 303 IENAVAVFEEI----THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISS 358
++ A + +E+ P IV++N ++ G H + LLN M + G PN T +S
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 359 ALK 361
+K
Sbjct: 602 LVK 604
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 12/256 (4%)
Query: 117 VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGM 176
V+++ LI+GY + G K+A N M G N T+ +++ + DL+ ++
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 177 SVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV----VSWNALFSCYVQSDF 232
G + F N++V K G + ++ KL G A + V++ L Y +S
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNA--CAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
+A ++ KEM+ G++P + ++++N G+ F
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF-- 599
Query: 291 NALVDMYSKGGRIENAVAVFEEI----THPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
N+LV Y ++ A A+++++ PD ++ ++ G + A L EMK
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 347 SGACPNVFTISSALKA 362
G +V T S +K
Sbjct: 660 KGFSVSVSTYSVLIKG 675
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 46/303 (15%)
Query: 70 ELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGY 126
E + +IR G D L+ + K G A K + D+ V++++A+ISG+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 127 VQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDG 186
Q G EA F++M G++ + TF ++
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING-------------------------- 430
Query: 187 FVANTLVVMYAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSDFCVEAVDLFKE 242
Y K G + D+ ++ ++ +P+VV++ L + A +L E
Sbjct: 431 ---------YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 243 MVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGR 302
M + G++PN F+ + I+N N D + L+D Y K G
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 303 IENAVAVFEEI----THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISS 358
++ A + +E+ P IV++N ++ G H + LLN M + G PN T +S
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 359 ALK 361
+K
Sbjct: 602 LVK 604
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 12/256 (4%)
Query: 117 VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGM 176
V+++ LI+GY + G K+A N M G N T+ +++ + DL+ ++
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 177 SVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSV----VSWNALFSCYVQSDF 232
G + F N++V K G + ++ KL G A + V++ L Y +S
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 233 CVEAVDLFKEMVRGGIRPNEFSLSIILNA--CAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
+A ++ KEM+ G++P + ++++N G+ F
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF-- 599
Query: 291 NALVDMYSKGGRIENAVAVFEEI----THPDIVSWNAVIAGCVQHECNDWALALLNEMKS 346
N+LV Y ++ A A+++++ PD ++ ++ G + A L EMK
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 347 SGACPNVFTISSALKA 362
G +V T S +K
Sbjct: 660 KGFSVSVSTYSVLIKG 675
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 39/271 (14%)
Query: 117 VSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHGM 176
V+++ LI+G+ +NG +EA DM G ++F +++ + + V
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 177 SVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIVAPSVVSWNALFSCYVQSDFCVEA 236
+ G N + G++ D+R+L S+ AP VVS+N L Y++ VEA
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEA 393
Query: 237 VDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDM 296
LF ++ G I P SI+ + N L+D
Sbjct: 394 SLLFDDLRAGDIHP-----SIV------------------------------TYNTLIDG 418
Query: 297 YSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPN 352
+ G +E A + EE+T PD++++ ++ G V++ A + +EM G P+
Sbjct: 419 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Query: 353 VFTISSALKACAAVGFKDLGRQLHSCLIKID 383
+ ++ +G D +LH ++ D
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 118/284 (41%), Gaps = 16/284 (5%)
Query: 88 NHLVSLYSKCGRFGYARKLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCM 144
N L+ Y K G+F A L D D+ +V+++ LI G ++G + A +M
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 145 LGVKCNEFTFPSVLKACSIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGD 204
+ + T+ +++K +L+M +V+ + G DG+ T V + G
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 205 SRKLFGSIVA-----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
+ +L +VA P + +N + V+A++ +++ R G+ P+ + + ++
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMY--SKGGRIENAVAVFEEI---- 313
L NG V +Y +K GR+E A E+
Sbjct: 558 RGY--LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG 615
Query: 314 THPDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTIS 357
P++++ NA++ G + D A L +M+ G PN ++ +
Sbjct: 616 VRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 145/344 (42%), Gaps = 16/344 (4%)
Query: 47 KPPI-SYTNLLSQCVASKSLTLGMELHAHLIRFGFSHDPSFRNHLVSLYSKCGRFGYARK 105
KP I +Y ++ +K + + + R G + LV+ R+ A +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 106 LVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACS 162
L+ + + V+++SAL+ +V+NG EA F +M + + + T+ S++
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 163 IKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSVV 218
+ ++ ++ + V G +D NTL+ + K ++ D KLF + + + V
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 219 SWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXX 278
++N L + Q+ +A + F +M GI P+ ++ +I+L
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 279 XXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEIT----HPDIVSWNAVIAGCVQHECN 334
D + ++ K G++E A ++F ++ PDIV++ +++G
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 335 DWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLGRQLHSC 378
AL +MK G N T+S +A +L +++ SC
Sbjct: 487 HEVEALYTKMKQEGLMKNDCTLSDGDITLSA----ELIKKMLSC 526
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 12/229 (5%)
Query: 201 QLGDSRKLFGSIVA----PSVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLS 256
+L D+ LF +V PS+V +N L S V+ + L K+M GIR + ++ +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 257 IILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH- 315
I++N S D+ + +LV+ + + R+ +AV++ +++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 316 ---PDIVSWNAVIAG-CVQHECNDWALALLNEMKSSGACPNVFTISSALKA-CAAVGFKD 370
PDIV++NA+I C ND A E++ G PNV T ++ + C + + D
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVND-AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 371 LGRQLHSCLIKIDTDSDFFVAVGLIDMYSKCEMLSDARRVYELMPKKDI 419
R L S +IK + L+D + K + +A+ ++E M + I
Sbjct: 244 AAR-LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 119/305 (39%), Gaps = 43/305 (14%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
+V ++ L+S V+ + M +LG++ + +TF V+ +++ + G
Sbjct: 85 IVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILG 144
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSD 231
+ G++ D +LV + + ++ D+ L +V P +V++NA+ ++
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXXXXXXXXXXDQFSAN 291
+A D FKE+ R GIRPN + + ++N S + + +
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 292 ALVDMYSKGGRIENAVAVFEEITH------------------------------------ 315
AL+D + K G++ A +FEE+
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 316 ---PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACAAVGFKDLG 372
D+VS+N +I G + + + + L EM G N T ++ ++ G D
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 373 RQLHS 377
++ S
Sbjct: 385 QEFFS 389
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 118/289 (40%), Gaps = 17/289 (5%)
Query: 90 LVSLYSKCGRFGYARKLVD---QSTETDVVVSWSALISGYVQNGFGKEALLAFNDMCMLG 146
L++ Y K G F A +++ + T V+S++AL+ Y + G A F M G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 147 VKCNEFTFPSVLKACSIKKDLNMGRKVHGMSV---VTGFDSDGFVANTLVVMYAKCGQLG 203
+ + T+ +LK +V + + D + + ++ MY K G
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 204 DSRKLFGSIVAP----SVVSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIIL 259
+RK+F S+V S V++N+L S E ++ +M R I+P+ S ++++
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 260 NACAGLRNGSXXXXXXXXXXXXXXXXDQFSANALVDMYSKGGRIENAVAVFEEITH---- 315
A R + N L+D ++ G +E A VF+ +
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 388
Query: 316 PDIVSWNAVIAGCVQHECNDWALALLNEMKSSGACPNVFTISSALKACA 364
PD+ S+ +++ V + A +K G PN+ T + +K A
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 437
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 7/209 (3%)
Query: 105 KLVDQSTETDV---VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKAC 161
K+ DQ +D+ VVS++ LI Y + +EAL F +M GV+ + +L A
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 162 SIKKDLNMGRKVHGMSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSI----VAPSV 217
+I + + V D + T++ Y + + K F I P++
Sbjct: 367 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426
Query: 218 VSWNALFSCYVQSDFCVEAVDLFKEMVRGGIRPNEFSLSIILNACAGLRNGSXXXXXXXX 277
V++ L Y +++ + ++++++M GI+ N+ L+ I++A +N
Sbjct: 427 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 486
Query: 278 XXXXXXXXDQFSANALVDMYSKGGRIENA 306
DQ + N L+ + S +E A
Sbjct: 487 MESCGVPPDQKAKNVLLSLASTQDELEEA 515
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 10/244 (4%)
Query: 116 VVSWSALISGYVQNGFGKEALLAFNDMCMLGVKCNEFTFPSVLKACSIKKDLNMGRKVHG 175
+V+++ +I GY + G ++A+ DM G + ++ T+ ++++AC D ++
Sbjct: 257 IVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQ 316
Query: 176 MSVVTGFDSDGFVANTLVVMYAKCGQLGDSRKLFGSIV----APSVVSWNALFSCYVQSD 231
G + ++ K G+L + +F +++ P+V + L Y +S
Sbjct: 317 EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSG 376
Query: 232 FCVEAVDLFKEMVRGGIRPNEFSLSIILNA-CAGLRNGSXXXXXXXXXXXXXXXXDQFSA 290
+A+ L M+ G +P+ + S+++N C R F +
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 436
Query: 291 NALVDMYSKGGRIENAVAVFEEITHP----DIVSWNAVIAGCVQHECNDWALALLNEMKS 346
+L+D K GR++ A +FEE++ D +NA+I +H D A+AL M+
Sbjct: 437 -SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Query: 347 SGAC 350
C
Sbjct: 496 EEGC 499