Miyakogusa Predicted Gene

Lj0g3v0082089.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0082089.2 Non Chatacterized Hit- tr|D7FT86|D7FT86_ECTSI
Putative uncharacterized protein OS=Ectocarpus silicul,23.5,7e-16,
,CUFF.4278.2
         (398 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23200.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   509   e-144
AT5G08270.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   420   e-117

>AT5G23200.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G08270.1); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr5:7807319-7808988 FORWARD LENGTH=399
          Length = 399

 Score =  509 bits (1310), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 244/404 (60%), Positives = 306/404 (75%), Gaps = 11/404 (2%)

Query: 1   MASLFQKIQQA---FAKRPKFTKDPRQLQFEVDINRLFLYSSFNRLGKSADEAAAEQVIE 57
           MA+LF K QQA    AK   F K+PRQLQFE D+N+LF+Y+S+NRLG+ A+E  AE++IE
Sbjct: 1   MATLFNKFQQAVGVLAKSTTFAKNPRQLQFEADVNKLFMYTSYNRLGREAEETDAEEIIE 60

Query: 58  MASKASFDDQQKQVQENVHSQIRTFCSFMDEILLPNEKPLNDPLGLSQQATVFPRRSGLS 117
           MA KA+  +QQKQVQEN+H Q+  FCS MD ILLP+ +   +  G    +   PRRSGL+
Sbjct: 61  MAGKATLSEQQKQVQENIHYQVEKFCSLMDGILLPDVR--RNESGSQSTSPRPPRRSGLT 118

Query: 118 FAVGRTDAPPH--DSAAPQTRPLSQAEVSQKLKDQLGYTLNVKPSQISHKDAGRGLFLDG 175
           FA+G  +A PH      P+T+PL   +VSQ+L DQ+GYTL  KPS I HKDAG+G F+ G
Sbjct: 119 FAIGSNNAFPHADQPLVPETKPLKLNDVSQRLMDQMGYTLETKPSVIPHKDAGQGCFIKG 178

Query: 176 ALNVGAVVAFYPGVVYSPAYYRYIPGYPNVAARNPYLITRYDGNVINAQPWGTGGDKREM 235
             +VG V+AFYPGV+YSPA+Y+YIPGYP V ++N YLITRYDG VINAQPWG GG+ RE 
Sbjct: 179 EADVGTVLAFYPGVIYSPAFYKYIPGYPKVDSQNSYLITRYDGTVINAQPWGLGGESREA 238

Query: 236 WNGRSTQEIKADLKGAEKGSERFWKMLSKPLEGNKGDRSELIERRNPLALAHFANHPPKG 295
           WNG  T  +KA+ K AE GS+R WK LSKPLEG+ G   E++ERRNPLA  H ANHP K 
Sbjct: 239 WNGSYTPAVKANTKTAENGSDRLWKALSKPLEGS-GKGKEVLERRNPLAFGHLANHPAKE 297

Query: 296 VQPNVMICPYDYPLTEDNMRVHIPNVLFGDA-EVNMRRFGSFWFKSGGSRNSGSHVPTLK 354
           + PNVMICPYD+PL   ++R +IPN+ FGD+ E+ M+RFGSFWFK+ GS+N G   P LK
Sbjct: 298 MTPNVMICPYDFPLMAKDLRPYIPNISFGDSGEIKMKRFGSFWFKT-GSKN-GLEAPVLK 355

Query: 355 SLVLIATRAIQDEELLLNYRLSNTKRRPEWYAPVDEEEDRRRWS 398
           +LVL+ATR++ +EELLLNYRLSN+KRRP+WY PV+EEEDRRRWS
Sbjct: 356 TLVLVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRWS 399


>AT5G08270.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G23200.1); Has 89 Blast hits to 86 proteins in
           45 species: Archae - 0; Bacteria - 0; Metazoa - 27;
           Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
           14 (source: NCBI BLink). | chr5:2661747-2663482 FORWARD
           LENGTH=386
          Length = 386

 Score =  420 bits (1079), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/398 (54%), Positives = 286/398 (71%), Gaps = 25/398 (6%)

Query: 1   MASLFQKIQQA---FAKRPKFTKDPRQLQFEVDINRLFLYSSFNRLGKSADEAAAEQVIE 57
           M  LF K QQ     AK   F K+PRQLQFE DIN+LF+++S+NRLG+ A+EA AE++IE
Sbjct: 6   MMFLFGKFQQGVGVLAKSTTFAKNPRQLQFEADINKLFMFTSYNRLGRDAEEADAEEIIE 65

Query: 58  MASKASFDDQQKQVQENVHSQIRTFCSFMDEILLPN---EKPLNDPLGLSQQATVFPRRS 114
           MA KA+F +QQKQVQEN+H Q++ FCS M+EILL N    K LN+P   S++  + P   
Sbjct: 66  MAGKATFSEQQKQVQENIHYQLQNFCSSMNEILLTNIDKTKDLNEPGSESRRDNIVPA-- 123

Query: 115 GLSFAVGRTDAPPHDSAAPQTRPLSQAEVSQKLKDQLGYTLNVKPSQISHKDAGRGLFLD 174
                    D P      P+T+PL   EVS +LKD++GYTL +KPS I HKDAG+G F++
Sbjct: 124 --------ADKP----IVPETKPLKLDEVSHRLKDRVGYTLEIKPSLIPHKDAGQGCFIE 171

Query: 175 GALNVGAVVAFYPGVVYSPAYYRYIPGYPNVAARNPYLITRYDGNVINAQPWGTGGDKRE 234
           G  +VGAV+AFYPGV+YSPA++RYIPGYPNV A+N YLIT YDG VINAQPWG GG  RE
Sbjct: 172 GEADVGAVLAFYPGVIYSPAFHRYIPGYPNVDAQNSYLITGYDGTVINAQPWGRGGISRE 231

Query: 235 MWNGR-STQEIKADLKGAEKGSERFWKMLSKPLEGNKGDRSELIERRNPLALAHFANHPP 293
           +WNG  +T EI+ +    E  S++ WKMLS+PLEG+ G  + +IE RNPLA  HF NHP 
Sbjct: 232 VWNGSFTTPEIRTEATTTENSSDKVWKMLSRPLEGSGGVEA-VIEMRNPLAFGHFINHPG 290

Query: 294 KGVQPNVMICPYDYPLTEDNMRVHIPNVLFGD-AEVNMRRFGSFWFKSGGSRNSGSHVPT 352
           K ++ NVMICPYD+ L+E  MR +IPNV FG+  +V M RF SF  ++G + +  +HV  
Sbjct: 291 KEMESNVMICPYDFLLSETEMRAYIPNVAFGNTGDVKMGRFESFLSRTGSNSSLDAHV-- 348

Query: 353 LKSLVLIATRAIQDEELLLNYRLSNTKRRPEWYAPVDE 390
           LK++VL+AT+A+ +EEL+LNYRLSN+++R EWY P+DE
Sbjct: 349 LKTIVLVATKALCNEELMLNYRLSNSEKRLEWYIPLDE 386