Miyakogusa Predicted Gene

Lj0g3v0081669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0081669.1 tr|G7IRK4|G7IRK4_MEDTR Centrin-2 OS=Medicago
truncatula GN=MTR_2g089210 PE=4 SV=1,87.93,0,EF_HAND_1,EF-Hand 1,
calcium-binding site; EF-hand,NULL; no description,EF-hand-like
domain; CALCIUM,CUFF.4239.1
         (123 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54490.1 | Symbols: PBP1 | pinoid-binding protein 1 | chr5:22...   134   9e-33
AT4G27280.1 | Symbols:  | Calcium-binding EF-hand family protein...   133   3e-32
AT2G46600.1 | Symbols:  | Calcium-binding EF-hand family protein...   124   1e-29
AT1G66410.2 | Symbols: CAM4 | calmodulin 4 | chr1:24774431-24775...    46   5e-06
AT5G37780.3 | Symbols: CAM1, TCH1, ACAM-1 | calmodulin 1 | chr5:...    46   5e-06
AT5G37780.1 | Symbols: CAM1, TCH1, ACAM-1 | calmodulin 1 | chr5:...    46   5e-06
AT1G66410.1 | Symbols: CAM4, ACAM-4 | calmodulin 4 | chr1:247744...    46   5e-06
AT5G37780.2 | Symbols: CAM1, TCH1, ACAM-1 | calmodulin 1 | chr5:...    46   6e-06
AT2G27030.3 | Symbols: CAM5 | calmodulin 5 | chr2:11532069-11534...    45   8e-06
AT5G21274.1 | Symbols: CAM6, ACAM-6 | calmodulin 6 | chr5:721474...    45   9e-06
AT3G43810.1 | Symbols: CAM7 | calmodulin 7 | chr3:15664619-15666...    45   1e-05

>AT5G54490.1 | Symbols: PBP1 | pinoid-binding protein 1 |
           chr5:22121458-22121841 FORWARD LENGTH=127
          Length = 127

 Score =  134 bits (338), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 64/106 (60%), Positives = 82/106 (77%), Gaps = 1/106 (0%)

Query: 12  FEDLLPVIADKLGGEGLMKELCNGFQLLMDKDKGVITLESLRKN-SALMGLQDLKEDELV 70
           F+D  P +A KLGGEGL++E+C GF+LLMDKDKGVIT ESLR+N S ++GL DL +D++ 
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 71  SMLREGDLDGDGALTQMEFCVLMFRLSPQLMEESWVLLEQALHSEL 116
            M+ EGD D DGAL QMEFCVLMFRLSP+LME S  ++ + +  E 
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124


>AT4G27280.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr4:13663770-13664162 REVERSE LENGTH=130
          Length = 130

 Score =  133 bits (334), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/107 (59%), Positives = 83/107 (77%), Gaps = 1/107 (0%)

Query: 11  DFEDLLPVIADKLGGEGLMKELCNGFQLLMDKDKGVITLESLRKNSA-LMGLQDLKEDEL 69
           +F D LP +A  LGGEGL+ ELCNGF+LLMD++KGVIT ESLR+N+A ++GL DL ++++
Sbjct: 18  NFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDV 77

Query: 70  VSMLREGDLDGDGALTQMEFCVLMFRLSPQLMEESWVLLEQALHSEL 116
             M++EGD D DGAL QMEFCVLMFRLSP LME S  L+ + +  E 
Sbjct: 78  RCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124


>AT2G46600.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr2:19136070-19136477 FORWARD LENGTH=135
          Length = 135

 Score =  124 bits (311), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 84/112 (75%)

Query: 12  FEDLLPVIADKLGGEGLMKELCNGFQLLMDKDKGVITLESLRKNSALMGLQDLKEDELVS 71
           +ED+LPV+A+K+  E  + ELC GF LL D ++ +IT ESLR+NS ++G++ + +++   
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 72  MLREGDLDGDGALTQMEFCVLMFRLSPQLMEESWVLLEQALHSELNNKNKSN 123
           M+REGDLDGDGAL Q EFCVLM RLSP++ME++   LE+AL  EL N N S+
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCNHNLSS 133


>AT1G66410.2 | Symbols: CAM4 | calmodulin 4 | chr1:24774431-24775785
           REVERSE LENGTH=159
          Length = 159

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 8   GVVDFEDLLPVIADKLGGEGLMKELCNGFQLLMDKDK-GVITLESLRKNSALMGLQDLKE 66
           G +DF + L ++A K+      +EL   F++  DKD+ G I+   LR     +G + L +
Sbjct: 72  GTIDFPEFLNLMAKKMKDTDSEEELKEAFRVF-DKDQNGFISAAELRHVMTNLG-EKLTD 129

Query: 67  DELVSMLREGDLDGDGALTQMEFCVLM 93
           +E+  M+RE D+DGDG +   EF  +M
Sbjct: 130 EEVEEMIREADVDGDGQINYEEFVKIM 156


>AT5G37780.3 | Symbols: CAM1, TCH1, ACAM-1 | calmodulin 1 |
           chr5:15004769-15006117 REVERSE LENGTH=175
          Length = 175

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 8   GVVDFEDLLPVIADKLGGEGLMKELCNGFQLLMDKDK-GVITLESLRKNSALMGLQDLKE 66
           G +DF + L ++A K+      +EL   F++  DKD+ G I+   LR     +G + L +
Sbjct: 88  GTIDFPEFLNLMAKKMKDTDSEEELKEAFRVF-DKDQNGFISAAELRHVMTNLG-EKLTD 145

Query: 67  DELVSMLREGDLDGDGALTQMEFCVLM 93
           +E+  M+RE D+DGDG +   EF  +M
Sbjct: 146 EEVEEMIREADVDGDGQINYEEFVKIM 172


>AT5G37780.1 | Symbols: CAM1, TCH1, ACAM-1 | calmodulin 1 |
           chr5:15004769-15006117 REVERSE LENGTH=149
          Length = 149

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 8   GVVDFEDLLPVIADKLGGEGLMKELCNGFQLLMDKDK-GVITLESLRKNSALMGLQDLKE 66
           G +DF + L ++A K+      +EL   F++  DKD+ G I+   LR     +G + L +
Sbjct: 62  GTIDFPEFLNLMAKKMKDTDSEEELKEAFRVF-DKDQNGFISAAELRHVMTNLG-EKLTD 119

Query: 67  DELVSMLREGDLDGDGALTQMEFCVLM 93
           +E+  M+RE D+DGDG +   EF  +M
Sbjct: 120 EEVEEMIREADVDGDGQINYEEFVKIM 146


>AT1G66410.1 | Symbols: CAM4, ACAM-4 | calmodulin 4 |
           chr1:24774431-24775785 REVERSE LENGTH=149
          Length = 149

 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 8   GVVDFEDLLPVIADKLGGEGLMKELCNGFQLLMDKDK-GVITLESLRKNSALMGLQDLKE 66
           G +DF + L ++A K+      +EL   F++  DKD+ G I+   LR     +G + L +
Sbjct: 62  GTIDFPEFLNLMAKKMKDTDSEEELKEAFRVF-DKDQNGFISAAELRHVMTNLG-EKLTD 119

Query: 67  DELVSMLREGDLDGDGALTQMEFCVLM 93
           +E+  M+RE D+DGDG +   EF  +M
Sbjct: 120 EEVEEMIREADVDGDGQINYEEFVKIM 146


>AT5G37780.2 | Symbols: CAM1, TCH1, ACAM-1 | calmodulin 1 |
           chr5:15004769-15006117 REVERSE LENGTH=164
          Length = 164

 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 8   GVVDFEDLLPVIADKLGGEGLMKELCNGFQLLMDKDK-GVITLESLRKNSALMGLQDLKE 66
           G +DF + L ++A K+      +EL   F++  DKD+ G I+   LR     +G + L +
Sbjct: 77  GTIDFPEFLNLMAKKMKDTDSEEELKEAFRVF-DKDQNGFISAAELRHVMTNLG-EKLTD 134

Query: 67  DELVSMLREGDLDGDGALTQMEFCVLM 93
           +E+  M+RE D+DGDG +   EF  +M
Sbjct: 135 EEVEEMIREADVDGDGQINYEEFVKIM 161


>AT2G27030.3 | Symbols: CAM5 | calmodulin 5 | chr2:11532069-11534176
           FORWARD LENGTH=181
          Length = 181

 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 4/118 (3%)

Query: 8   GVVDFEDLLPVIADKLGGEGLMKELCNGFQLLMDKDK-GVITLESLRKNSALMGLQDLKE 66
           G +DF + L ++A K+      +EL   F++  DKD+ G I+   LR     +G + L +
Sbjct: 62  GTIDFPEFLNLMARKMKDTDSEEELKEAFRVF-DKDQNGFISAAELRHVMTNLG-EKLTD 119

Query: 67  DELVSMLREGDLDGDGALTQMEFC-VLMFRLSPQLMEESWVLLEQALHSELNNKNKSN 123
           +E+  M++E D+DGDG +   EF  V+M +   + +  +      A + E N + KS+
Sbjct: 120 EEVDEMIKEADVDGDGQINYEEFVKVMMAKRRGKRVMAAKRSSNSAEYKEKNGRRKSH 177


>AT5G21274.1 | Symbols: CAM6, ACAM-6 | calmodulin 6 |
           chr5:7214740-7215950 REVERSE LENGTH=149
          Length = 149

 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 8   GVVDFEDLLPVIADKLGGEGLMKELCNGFQLLMDKDK-GVITLESLRKNSALMGLQDLKE 66
           G +DF + L ++A K+      +EL   F++  DKD+ G I+   LR     +G + L +
Sbjct: 62  GTIDFPEFLNLMARKMKDTDSEEELKEAFRVF-DKDQNGFISAAELRHVMTNLG-EKLSD 119

Query: 67  DELVSMLREGDLDGDGALTQMEFCVLM 93
           +E+  M+RE D+DGDG +   EF  +M
Sbjct: 120 EEVDEMIREADVDGDGQINYEEFVKVM 146


>AT3G43810.1 | Symbols: CAM7 | calmodulin 7 | chr3:15664619-15666355
           REVERSE LENGTH=149
          Length = 149

 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 8   GVVDFEDLLPVIADKLGGEGLMKELCNGFQLLMDKDK-GVITLESLRKNSALMGLQDLKE 66
           G +DF + L ++A K+      +EL   F++  DKD+ G I+   LR     +G + L +
Sbjct: 62  GTIDFPEFLNLMARKMKDTDSEEELKEAFRVF-DKDQNGFISAAELRHVMTNLG-EKLTD 119

Query: 67  DELVSMLREGDLDGDGALTQMEFCVLM 93
           +E+  M+RE D+DGDG +   EF  +M
Sbjct: 120 EEVDEMIREADVDGDGQINYEEFVKVM 146