Miyakogusa Predicted Gene
- Lj0g3v0081539.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0081539.2 Non Chatacterized Hit- tr|I3SFZ3|I3SFZ3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,46.15,0.00000000000002,seg,NULL,CUFF.4238.2
(229 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12320.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 67 1e-11
AT5G06980.4 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 56 2e-08
AT3G54500.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 1e-06
AT5G06980.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 50 1e-06
AT3G54500.2 | Symbols: | BEST Arabidopsis thaliana protein matc... 50 1e-06
AT3G54500.4 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 1e-06
AT3G54500.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 50 1e-06
>AT3G12320.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G06980.4); Has 102 Blast hits to 102 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink). | chr3:3924034-3925262 FORWARD
LENGTH=269
Length = 269
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 53 LQDLPRFERMDDIFLETIPEDPPCVEI-LDKSVNFSPEKRCSNTPGGLQKDIAASKFDSS 111
L D E+MDD+FL +I ED P + + ++ + + S+ GG ++ D S
Sbjct: 80 LHDFEGIEQMDDMFLSSILEDVPEDDGDVHRATSSNNSVGSSSMYGGGREVPMFHCHDMS 139
Query: 112 NSESKDCLDIEPPPVKSLDSH-------EEFILKDLQMVIGQFTEGTRFGFRDALYRLSG 164
E + LDS+ EEF+L+DLQ + T+ TR FRD YRL+
Sbjct: 140 FKEEAPFTISDLSEENMLDSNYGDELSSEEFVLQDLQRASQKLTDETRKCFRDTFYRLA- 198
Query: 165 YTEQQQVLQDKD--ADPNTQKATLHT---DDNETVRFQNNKSLESETNSTDRLIAKLMFN 219
+ QDK PN+++ + T D + RF + +ESETNS DR +A L FN
Sbjct: 199 -----RSSQDKSDSVSPNSEELLMQTSRYDYGDGNRFSREEEIESETNSIDRAVANLTFN 253
Query: 220 NMEFNMN 226
ME N++
Sbjct: 254 KMESNIS 260
>AT5G06980.4 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: response to
karrikin; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G12320.1). |
chr5:2167799-2169110 FORWARD LENGTH=279
Length = 279
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 131 SHEEFILKDLQMVIGQFTEGTRFGFRDALYRLSGYTEQQQVLQDKDADPNTQKATLHTDD 190
S EE +L+DLQ T+ TR FRD YRL+ ++Q+ D ++D + T D
Sbjct: 174 SAEEVVLQDLQRATEMLTDDTRKCFRDTFYRLAKNSQQKS---DSNSDEFLEDRTSSNDS 230
Query: 191 NETVRFQNNKSLESETNSTDRLIAKLMFNNMEFNM 225
+ ++ F + L + NS DR +A L FN ME NM
Sbjct: 231 SPSMTFLSVGKLNLKPNSIDRAVANLTFNKMESNM 265
>AT3G54500.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.1). |
chr3:20175792-20178482 REVERSE LENGTH=669
Length = 669
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 126 VKSLDSHEEF-ILKDLQMVIGQFTEGTRFGFRDALYRLSGYTEQQQVLQDKDADPNTQKA 184
++D+ EF +L LQ V+ + GTR RD+L+RL+G Q+ D T +
Sbjct: 489 AAAVDNSAEFAVLYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQ- 547
Query: 185 TLHTDDNETV-------RFQNNKSLESETNSTDRLIAKLMFN 219
DD E + R+ E+ TN TDR +A L+F+
Sbjct: 548 ----DDQEVIPREESRYRYAGMPDTEAVTNPTDRTVAHLLFH 585
>AT5G06980.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN: response to
karrikin; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G12320.1). |
chr5:2167799-2169110 FORWARD LENGTH=266
Length = 266
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 30/183 (16%)
Query: 53 LQDLPRFERMDDIFLETIPEDPPCVEILDKSVNFSPEKRCSNTPGGLQKDIAASKFDSSN 112
L D + MDD+FL +I ED P E ++F +++ + +
Sbjct: 90 LHDFDEIQHMDDMFLSSILEDVPGNENF---LSFKESDNNNSSSSSYLDTTDGREVPLFH 146
Query: 113 SESKDCLDI----EPPPV------KSLDSHEEFILKDLQMVIGQFTEGTRFGFRDALYRL 162
+ C D+ E P+ K S EE +L+DLQ T+ TR FRD YRL
Sbjct: 147 YNWETCQDMPLMEEDAPMNLCEENKEEASAEEVVLQDLQRATEMLTDDTRKCFRDTFYRL 206
Query: 163 SGYTEQQQVLQDKDADPNTQKATLHTDDNETVRFQNNKSLESETNSTDRLIAKLMFNNME 222
+ ++Q D + ++ F + L + NS DR +A L FN ME
Sbjct: 207 AKNSQQNS-----------------NDSSPSMTFLSVGKLNLKPNSIDRAVANLTFNKME 249
Query: 223 FNM 225
NM
Sbjct: 250 SNM 252
>AT3G54500.2 | Symbols: | BEST Arabidopsis thaliana protein match
is: dentin sialophosphoprotein-related
(TAIR:AT5G64170.1); Has 162 Blast hits to 160 proteins
in 41 species: Archae - 0; Bacteria - 0; Metazoa - 23;
Fungi - 11; Plants - 118; Viruses - 0; Other Eukaryotes
- 10 (source: NCBI BLink). | chr3:20175792-20178275
REVERSE LENGTH=569
Length = 569
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 126 VKSLDSHEEF-ILKDLQMVIGQFTEGTRFGFRDALYRLSGYTEQQQVLQDKDADPNTQKA 184
++D+ EF +L LQ V+ + GTR RD+L+RL+G Q+ D T +
Sbjct: 389 AAAVDNSAEFAVLYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQ- 447
Query: 185 TLHTDDNETV-------RFQNNKSLESETNSTDRLIAKLMFN 219
DD E + R+ E+ TN TDR +A L+F+
Sbjct: 448 ----DDQEVIPREESRYRYAGMPDTEAVTNPTDRTVAHLLFH 485
>AT3G54500.4 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.2). |
chr3:20175792-20178737 REVERSE LENGTH=663
Length = 663
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 126 VKSLDSHEEF-ILKDLQMVIGQFTEGTRFGFRDALYRLSGYTEQQQVLQDKDADPNTQKA 184
++D+ EF +L LQ V+ + GTR RD+L+RL+G Q+ D T +
Sbjct: 483 AAAVDNSAEFAVLYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQ- 541
Query: 185 TLHTDDNETV-------RFQNNKSLESETNSTDRLIAKLMFN 219
DD E + R+ E+ TN TDR +A L+F+
Sbjct: 542 ----DDQEVIPREESRYRYAGMPDTEAVTNPTDRTVAHLLFH 579
>AT3G54500.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: dentin sialophosphoprotein-related
(TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins
in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38;
Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes
- 10 (source: NCBI BLink). | chr3:20175792-20178737
REVERSE LENGTH=648
Length = 648
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 126 VKSLDSHEEF-ILKDLQMVIGQFTEGTRFGFRDALYRLSGYTEQQQVLQDKDADPNTQKA 184
++D+ EF +L LQ V+ + GTR RD+L+RL+G Q+ D T +
Sbjct: 468 AAAVDNSAEFAVLYRLQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQ- 526
Query: 185 TLHTDDNETV-------RFQNNKSLESETNSTDRLIAKLMFN 219
DD E + R+ E+ TN TDR +A L+F+
Sbjct: 527 ----DDQEVIPREESRYRYAGMPDTEAVTNPTDRTVAHLLFH 564