Miyakogusa Predicted Gene
- Lj0g3v0081459.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0081459.3 tr|I1L4X3|I1L4X3_SOYBN Ubiquitin
carboxyl-terminal hydrolase (Fragment) OS=Glycine max PE=3
SV=1,65.83,0,UCH_2_3,Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2; seg,NULL; Cysteine proteinases,NULL;,CUFF.4229.3
(214 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 186 7e-48
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 183 8e-47
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 128 2e-30
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 102 1e-22
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 97 6e-21
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 96 1e-20
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 92 2e-19
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 92 2e-19
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 88 5e-18
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 87 6e-18
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 86 2e-17
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 79 3e-15
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 79 3e-15
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 78 4e-15
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 78 5e-15
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 76 2e-14
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 76 2e-14
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 76 2e-14
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 74 7e-14
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 73 1e-13
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 69 2e-12
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 69 2e-12
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 69 2e-12
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 67 6e-12
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 66 1e-11
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 66 2e-11
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 66 2e-11
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 65 3e-11
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 65 3e-11
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 65 5e-11
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 65 5e-11
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 64 6e-11
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 64 9e-11
AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases superf... 48 6e-06
AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases superf... 47 7e-06
AT3G21280.1 | Symbols: UBP7 | ubiquitin-specific protease 7 | ch... 47 8e-06
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 186 bits (473), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
Query: 3 GRVFQ-LRCSNCGHCSDTFEXXXXXXXXXXXXNTIKDALDSYFKVEKIDGKFTCTSCKEV 61
GR+ LRC NC + S+T+E +T+ AL+S+ +VEK+D + TC +C E
Sbjct: 298 GRLISGLRCCNCDYVSETYEKSVGLSLEIEDVDTLGSALESFTRVEKLDEQLTCDNCNEK 357
Query: 62 VSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTLELDLQPYTFGAENDNVELK 121
VS EKQLLL K P VA HLKRF + + ++KI HV LE+DLQPY + + V K
Sbjct: 358 VSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPYMRNIQENEVSTK 417
Query: 122 YDLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQEAYILVYARQG 181
Y LYA+V H G S GHY +VRSAP WH FDDSKVT + D VLSQ++YIL YAR+G
Sbjct: 418 YHLYALVEHFGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDSYILFYAREG 477
Query: 182 TPWFSSIMEDV 192
T WFSS+ E++
Sbjct: 478 TRWFSSVYEEM 488
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 183 bits (464), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 120/195 (61%)
Query: 3 GRVFQLRCSNCGHCSDTFEXXXXXXXXXXXXNTIKDALDSYFKVEKIDGKFTCTSCKEVV 62
G + L C NC S+TFE NT+ AL+S+ VEK++ + TC +CKE V
Sbjct: 292 GLMSTLCCCNCNSVSNTFEPSLGWSLEIEDVNTLWKALESFTCVEKLEDQLTCDNCKEKV 351
Query: 63 SMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTLELDLQPYTFGAENDNVELKY 122
+ EKQL K P VA HLKRF D ++++KI +H+ F LELDL P+ + V +Y
Sbjct: 352 TKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRY 411
Query: 123 DLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQEAYILVYARQGT 182
LYA V H G GHY +VRSAP+ WH FDDSKVT +S + VLS+ AYIL YAR+GT
Sbjct: 412 HLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFYAREGT 471
Query: 183 PWFSSIMEDVNSSYQ 197
PWFSS E + + ++
Sbjct: 472 PWFSSTFEQLKTVFE 486
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 7/176 (3%)
Query: 7 QLRCSNCGHCSDTFEXXXXXXXXXXXXNTIKDALDSYFKVEKIDGK---FTCTSCKEVVS 63
Q++C C HCS+ F+ ++++ AL + VE +D + C CK+ V
Sbjct: 238 QVKCEQCSHCSNKFDPFLDLSLDISKADSLQRALSRFTAVELLDNGAKVYQCERCKQKVK 297
Query: 64 MEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTLELDLQPYTFGAENDNVELKYD 123
+KQL ++K P V +HLKRF + +KI V FT +D++P+ G N LKY
Sbjct: 298 AKKQLTVSKAPYVLTVHLKRF--EAHRSEKIDRKVDFTSAIDMKPFVSGPHEGN--LKYT 353
Query: 124 LYAVVVHTGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQEAYILVYAR 179
LY V+VH G S +SGHY CFVR++ W+ DD++V VS V +Q+AY+L Y R
Sbjct: 354 LYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFYVR 409
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 113/207 (54%), Gaps = 8/207 (3%)
Query: 1 MFGRVFQ--LRCSNCGHCSDTFEXXXXXXXXXXXXNTIKDALDSYFKVEKIDG--KFTCT 56
+FG Q ++C +CG S+ + +++K++L +F+ E +DG K+ C
Sbjct: 155 IFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCE 214
Query: 57 SCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTLELDLQPYTFGAEND 116
SC+++V+ KQ+ + + P++ + LKRF G + KI + F L L + A D
Sbjct: 215 SCEKLVTARKQMSILQAPNILVIQLKRFGG--IFGGKIDKAISFGEILVLSNFMSKASKD 272
Query: 117 NVELKYDLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQEAYILV 176
+ +Y L+ ++VH+G SP SGHY+ +V+ + +W+ +DS V+ + EVLS++AYIL
Sbjct: 273 -PQPEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILF 331
Query: 177 YARQG-TPWFSSIMEDVNSSYQHSGSG 202
++R P + + N + H +G
Sbjct: 332 FSRSNQRPASAKTLVTSNGTTSHEVNG 358
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 15/188 (7%)
Query: 1 MFGRVFQ--LRCSNCGHCSDTFEXXXXXXXXXX-XXNTIKDALDSYFKVEKI--DGKFTC 55
+FG + Q ++C+ C H SD +E ++++ LD + E + D + C
Sbjct: 292 IFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKC 351
Query: 56 TSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTLELDLQPY-TFGAE 114
C + V K+L + + P++ + LKR+ G K+ + F LDL PY + G +
Sbjct: 352 DRCSDYVKACKRLTIRRAPNILTIALKRYQGGRYG--KLNKRISFPETLDLNPYMSEGGD 409
Query: 115 NDNVELKYDLYAVVVHTGDSPNS---GHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQE 171
+V Y LYAV+VH D N+ GHY C+++ W++ DDS++ SV ++VLSQ
Sbjct: 410 GSDV---YKLYAVIVHL-DMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQR 465
Query: 172 AYILVYAR 179
AY+L+Y+R
Sbjct: 466 AYMLLYSR 473
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 86/150 (57%), Gaps = 9/150 (6%)
Query: 34 NTIKDALDSYFKVEKIDG--KFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSV 91
+T+ DAL + + E +DG K+ C SCK +K+L +T+ P+V + LKRF +
Sbjct: 702 STLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKFG- 760
Query: 92 KKIGNHVFFTLELDLQPYTFGAENDNVELKYDLYAVVVHTG--DSPNSGHYFCFVRSAPD 149
K+ + F LDL PY G + + Y LY V+VH ++ SGHY C++R+ +
Sbjct: 761 -KLNKLIRFPETLDLAPYVSGGSEKSHD--YKLYGVIVHLDVMNAAFSGHYVCYIRNQ-N 816
Query: 150 KWHKFDDSKVTSVSGDEVLSQEAYILVYAR 179
KW+K DDS V + + +L++ AY+L YAR
Sbjct: 817 KWYKADDSTVVTSDVERILTKGAYMLFYAR 846
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 15/188 (7%)
Query: 1 MFGRVFQ--LRCSNCGHCSDTFEXXXXXXXXXXXXN-TIKDALDSYFKVEKIDGK--FTC 55
+FG + Q ++C+ C + SD +E ++++ LD + E + G + C
Sbjct: 128 IFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKC 187
Query: 56 TSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTLELDLQPY-TFGAE 114
C + V K+L + P++ + LKRF G K+ + F DL PY + G E
Sbjct: 188 DRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLGPYMSGGGE 245
Query: 115 NDNVELKYDLYAVVVHTGDSPNS---GHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQE 171
+V Y LYAV+VH D N+ GHY C+V+ W++ DDS+V V ++VLSQ
Sbjct: 246 GSDV---YKLYAVIVHL-DMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQR 301
Query: 172 AYILVYAR 179
AY+L+Y+R
Sbjct: 302 AYMLLYSR 309
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 15/188 (7%)
Query: 1 MFGRVFQ--LRCSNCGHCSDTFEXXXXXXXXXXXXN-TIKDALDSYFKVEKIDGK--FTC 55
+FG + Q ++C+ C + SD +E ++++ LD + E + G + C
Sbjct: 298 IFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKC 357
Query: 56 TSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTLELDLQPY-TFGAE 114
C + V K+L + P++ + LKRF G K+ + F DL PY + G E
Sbjct: 358 DRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLGPYMSGGGE 415
Query: 115 NDNVELKYDLYAVVVHTGDSPNS---GHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQE 171
+V Y LYAV+VH D N+ GHY C+V+ W++ DDS+V V ++VLSQ
Sbjct: 416 GSDV---YKLYAVIVHL-DMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQR 471
Query: 172 AYILVYAR 179
AY+L+Y+R
Sbjct: 472 AYMLLYSR 479
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 11/186 (5%)
Query: 1 MFGRVFQ--LRCSNCGHCSDTFEXXXXXXXXXXX-XNTIKDALDSYFKVEKIDGK--FTC 55
MFG + ++C C H S+ +E +++DAL + + E +DG+ + C
Sbjct: 566 MFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRC 625
Query: 56 TSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTLELDLQPYTFGAEN 115
+ C V K+L + + P++ + LKRF E KI + F LD+ P F
Sbjct: 626 SRCAGYVRARKELSIHEAPNILTIVLKRF--QEGRYGKINKCISFPEMLDMIP--FMTRT 681
Query: 116 DNVELKYDLYAVVVH--TGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQEAY 173
+V Y LYAV+VH T ++ SGHY +V+ W++ DDS++ V +V+S+ AY
Sbjct: 682 GDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAY 741
Query: 174 ILVYAR 179
+L Y R
Sbjct: 742 MLFYMR 747
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 11/186 (5%)
Query: 1 MFGRVFQ--LRCSNCGHCSDTFEXXXXXXXXXXX-XNTIKDALDSYFKVEKIDGK--FTC 55
MFG + ++C C H S+ +E +++DAL + + E +DG+ + C
Sbjct: 562 MFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRC 621
Query: 56 TSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTLELDLQPYTFGAEN 115
+ C V K+L + + P++ + LKRF E KI + F LD+ P F
Sbjct: 622 SRCAGYVRARKELSIHEAPNILTIVLKRF--QEGRYGKINKCISFPEMLDMIP--FMTRT 677
Query: 116 DNVELKYDLYAVVVH--TGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQEAY 173
+V Y LYAV+VH T ++ SGHY +V+ W++ DDS++ V +V+S+ AY
Sbjct: 678 GDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAY 737
Query: 174 ILVYAR 179
+L Y R
Sbjct: 738 MLFYMR 743
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 7 QLRCSNCGHCSDTFEXXXXXXXXXX-XXNTIKDALDSYFKVEKIDG--KFTCTSCKEVVS 63
+++C C H S+ E ++++AL + E +DG ++ C CK
Sbjct: 458 KIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLDGENRYFCGRCKSYQK 517
Query: 64 MEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTLELDLQPYTFGAENDNVELKYD 123
+K+L++ + P++ + LKRF D K+ + F LD+ PY N Y
Sbjct: 518 AKKKLMILEGPNILTVVLKRFQSDNFG--KLSKPIHFPELLDISPY-MSDPNHGDHPVYS 574
Query: 124 LYAVVVHTGDSPN--SGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQEAYILVYAR 179
LYAVVVH SGHY C++++ W K DDS V V + VL + AY+L+YAR
Sbjct: 575 LYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVLLEGAYMLLYAR 632
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 40 LDSYFKVEKI--DGKFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNH 97
L+++ E + D + C CKE K+L L + P + +HLKRF K+ +
Sbjct: 770 LEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAY 829
Query: 98 VFFTLE-LDLQPYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKFDD 156
V F L+ LDL Y +N +Y LYA+ H G S GHY +V D+W+ FDD
Sbjct: 830 VDFPLDNLDLSSY-ISYKNGQTTYRYMLYAISNHYG-SMGGGHYTAYVHHGGDRWYDFDD 887
Query: 157 SKVTSVSGDEVLSQEAYILVYAR 179
S V +S +++ + AY+L Y R
Sbjct: 888 SHVHQISQEKIKTSAAYVLFYKR 910
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 40 LDSYFKVEKI--DGKFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNH 97
L+++ E + D + C CKE K+L L + P + +HLKRF K+ +
Sbjct: 770 LEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAY 829
Query: 98 VFFTLE-LDLQPYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKFDD 156
V F L+ LDL Y +N +Y LYA+ H G S GHY +V D+W+ FDD
Sbjct: 830 VDFPLDNLDLSSY-ISYKNGQTTYRYMLYAISNHYG-SMGGGHYTAYVHHGGDRWYDFDD 887
Query: 157 SKVTSVSGDEVLSQEAYILVYAR 179
S V +S +++ + AY+L Y R
Sbjct: 888 SHVHQISQEKIKTSAAYVLFYKR 910
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 7 QLRCSNCGHCSDTFEXXXXXXXXXXXXNTIKDALDSYFKVEKI--DGKFTCTSCKEVVSM 64
+ RC C + E ++I L ++ E + + KF C C +
Sbjct: 178 ETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEA 237
Query: 65 EKQLLLTKTPSVAALHLKRF--MGDEMSVKKIGNHVFFTLELDLQPYTFGAENDNVELKY 122
+K++ + K P + +HLKRF M KK+ V F LEL L ++ V+++Y
Sbjct: 238 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLS----NTVDEYVDIEY 293
Query: 123 DLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVL-----SQE------ 171
L+AVVVH G PN GHY V+S + W FDD V + V SQE
Sbjct: 294 SLFAVVVHVGSGPNHGHYVSLVKSH-NHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTD 352
Query: 172 -AYILVYARQGT 182
YIL+Y GT
Sbjct: 353 HGYILLYESLGT 364
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 7 QLRCSNCGHCSDTFEXXXXXXXXXXXXNTIKDALDSYFKVEKI--DGKFTCTSCKEVVSM 64
+ RC C + E ++I L ++ E + + KF C C +
Sbjct: 192 ETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEA 251
Query: 65 EKQLLLTKTPSVAALHLKRF--MGDEMSVKKIGNHVFFTLELDLQPYTFGAENDNVELKY 122
+K++ + K P + +HLKRF M KK+ V F LEL L ++ V+++Y
Sbjct: 252 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLS----NTVDEYVDIEY 307
Query: 123 DLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVL-----SQE------ 171
L+AVVVH G PN GHY V+S + W FDD V + V SQE
Sbjct: 308 SLFAVVVHVGSGPNHGHYVSLVKSH-NHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTD 366
Query: 172 -AYILVYARQGT 182
YIL+Y GT
Sbjct: 367 HGYILLYESLGT 378
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 36 IKDALDSYFKVEKIDG-KFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKI 94
I+DAL + E ++G + + T VVS K + + K + LHL RF K+
Sbjct: 407 IEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKL 466
Query: 95 GNHVFFTLELDLQPYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKF 154
V F LEL+L + N L+Y+L A + H G P+ GHY R +W +F
Sbjct: 467 RKGVKFPLELNLN-RSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRF 525
Query: 155 DDSKVTSVSGDEVLSQEAYILVYAR 179
DD+ VT + VL +AY+L Y +
Sbjct: 526 DDASVTPIGTKLVLHDQAYVLFYKQ 550
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 36 IKDALDSYFKVEKIDG-KFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKI 94
I+DAL + E ++G + + T VVS K + + K + LHL RF K+
Sbjct: 407 IEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKL 466
Query: 95 GNHVFFTLELDLQPYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKF 154
V F LEL+L + N L+Y+L A + H G P+ GHY R +W +F
Sbjct: 467 RKGVKFPLELNLN-RSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRF 525
Query: 155 DDSKVTSVSGDEVLSQEAYILVYAR 179
DD+ VT + VL +AY+L Y +
Sbjct: 526 DDASVTPIGTKLVLHDQAYVLFYKQ 550
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 36 IKDALDSYFKVEKIDG-KFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKI 94
I+DAL + E ++G + + T VVS K + + K + LHL RF K+
Sbjct: 407 IEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKL 466
Query: 95 GNHVFFTLELDLQPYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKF 154
V F LEL+L + N L+Y+L A + H G P+ GHY R +W +F
Sbjct: 467 RKGVKFPLELNLN-RSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRF 525
Query: 155 DDSKVTSVSGDEVLSQEAYILVYAR 179
DD+ VT + VL +AY+L Y +
Sbjct: 526 DDASVTPIGTKLVLHDQAYVLFYKQ 550
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 83/195 (42%), Gaps = 29/195 (14%)
Query: 7 QLRCSNCGHCSDTFEXXXXXXXXXXXXNTIKDALDSYFKVEKI--DGKFTCTSCKEVVSM 64
+ RC C + E ++I L ++ E + + KF C C +
Sbjct: 183 ETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEA 242
Query: 65 EKQLLLTKTPSVAALHLKRFMGDEM--SVKKIGNHVFFTLELDL----QPYTFGAENDNV 118
+K++ + K P + +HLKRF E KK+ V F LEL L +PY
Sbjct: 243 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEPYA-------- 294
Query: 119 ELKYDLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVL-----SQE-- 171
+++Y L+AVVVH G PN GHY V+S + W FDD V + V SQE
Sbjct: 295 DVEYSLFAVVVHVGSGPNHGHYVSLVKSH-NHWLFFDDENVEMIEESAVQTFFGSSQEYS 353
Query: 172 -----AYILVYARQG 181
YIL Y G
Sbjct: 354 SNTDHGYILFYESLG 368
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 40 LDSYFKVEKI--DGKFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNH 97
L+++ + E + D + C C E K+L L + P V +HLKRF K+
Sbjct: 774 LEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETF 833
Query: 98 VFFTL-ELDLQPYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVRSAPD-KWHKFD 155
V F + +LDL Y +L Y+LYA+ H G SGHY ++ D +W+ FD
Sbjct: 834 VNFPIHDLDLTKYVANKNLSQPQL-YELYALTNHYGGM-GSGHYTAHIKLLDDSRWYNFD 891
Query: 156 DSKVTSVSGDEVLSQEAYILVYARQ 180
DS ++ ++ D+V S AY+L Y R+
Sbjct: 892 DSHISHINEDDVKSGAAYVLFYRRK 916
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 40 LDSYFKVEKI--DGKFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNH 97
L+++ E + D + C SCKE K+L L K P + HLKRF KI
Sbjct: 753 LEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTF 812
Query: 98 VFFTL-ELDLQPYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVRSAPD-KWHKFD 155
V F + +LDL Y +ND L Y+LYAV H G GHY + + D +W+ FD
Sbjct: 813 VNFPVHDLDLSKYV-KNKNDQSYL-YELYAVSNHYGGL-GGGHYTAYAKLIDDNEWYHFD 869
Query: 156 DSKVTSVSGDEVLSQEAYILVYAR 179
DS V+SV+ E+ + AY+L Y R
Sbjct: 870 DSHVSSVNESEIKNSAAYVLFYRR 893
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 40 LDSYFKVEKI--DGKFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNH 97
L+++ E + D + C SCKE K+L L K P + HLKRF KI
Sbjct: 753 LEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTF 812
Query: 98 VFFTL-ELDLQPYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVRSAPD-KWHKFD 155
V F + +LDL Y +ND L Y+LYAV H G GHY + + D +W+ FD
Sbjct: 813 VNFPVHDLDLSKYV-KNKNDQSYL-YELYAVSNHYGGL-GGGHYTAYAKLIDDNEWYHFD 869
Query: 156 DSKVTSVSGDEVLSQEAYILVYAR 179
DS V+SV+ E+ + AY+L Y R
Sbjct: 870 DSHVSSVNESEIKNSAAYVLFYRR 893
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 40 LDSYFKVEKI--DGKFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNH 97
L+++ E + D + C SCKE K+L L K P + HLKRF KI
Sbjct: 754 LEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNKIDTF 813
Query: 98 VFFTL-ELDLQPYTFGAENDNVE-LKYDLYAVVVHTGDSPNSGHYFCFVRSAPD-KWHKF 154
V F + +LDL Y +N N + Y+LYAV H G GHY + + D KW+ F
Sbjct: 814 VNFPVHDLDLSKY---VKNKNGQSYLYELYAVSNHYGGL-GGGHYTAYAKLIDDNKWYHF 869
Query: 155 DDSKVTSVSGDEVLSQEAYILVYAR 179
DDS V+SV+ E+ + AY+L Y R
Sbjct: 870 DDSHVSSVNESEIRNSAAYVLFYRR 894
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Query: 40 LDSYFKVEKI--DGKFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNH 97
L+++ E + D + C CKE K+L L K P + HLKRF KI
Sbjct: 739 LEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYFKNKIDTL 798
Query: 98 VFFTL-ELDLQPYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVRSAPD-KWHKFD 155
V F + +LDL Y D Y+LYA+ H G GHY + + + KW+ FD
Sbjct: 799 VNFHIHDLDLSKYV--KNEDGQSYLYELYAISNHYGGL-GGGHYTAYAKLMDETKWYNFD 855
Query: 156 DSKVTSVSGDEVLSQEAYILVYAR 179
DS+V++V+ E+ + AY+L Y R
Sbjct: 856 DSRVSAVNESEIKTSAAYVLFYQR 879
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 10 CSNCGH---CSDTFEXXXXXXXXXXXXNTIKDALDSYFKVEKIDG--KFTCTSCKEVVSM 64
CS CG S E ++ +L+ Y +E+++G ++ C SC V
Sbjct: 225 CSKCGRDSEASSKMEDFYALELNVKGLKSLDASLNDYLSLEQLNGDNQYFCGSCNARVDA 284
Query: 65 EKQLLLTKTPSVAALHLKR--FMGDEMSVKKIGNHVFFTLELDLQPYTFGAENDNVELKY 122
+ + L P V LKR F+ + KKI + F LD+ AE+ +L Y
Sbjct: 285 TRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQVLDMGSRL--AESSQNKLTY 342
Query: 123 DLYAVVVHTGDSPNSGHYFCFVRSAPDK-WHKFDDSKVTSV 162
DL AV++H G + NSGHY ++ W +FDD V+ +
Sbjct: 343 DLSAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEHVSEL 383
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1 |
chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 66 KQLLLTKTPSVAALHLKRFMGDEM-SVKKIGNHVFFTLELDLQPYTFGAENDNVELKYDL 124
K++L+ K P V +HLKRF D V K+ HV F +DL Y ++ E Y L
Sbjct: 956 KKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVYRL 1015
Query: 125 YAVVVHTGDSPNSGHYFCFVRSA-----------PDK--WHKFDDSKVTSVSGDEVLSQE 171
+V H G + + GHY ++R P+ W+ DS+V S +EVL E
Sbjct: 1016 AGLVEHLG-AMSRGHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEVLRSE 1074
Query: 172 AYILVYAR 179
AYIL Y R
Sbjct: 1075 AYILFYER 1082
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 66 KQLLLTKTPSVAALHLKRFMGD-EMSVKKIGNHVFFTLELDLQPYTFGAENDNVELKYDL 124
K++L+ K P V +HLKRF D + K+ HV F +DL+ Y + Y L
Sbjct: 834 KKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVYRL 893
Query: 125 YAVVVHTGDSPNSGHYFCFVR---------SAPDKWHKFDDSKVTSVSGDEVLSQEAYIL 175
+V H+G + GHY +VR S+ W+ D+ V VS ++VL EAYIL
Sbjct: 894 AGLVEHSG-TMRGGHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYIL 952
Query: 176 VYAR 179
Y R
Sbjct: 953 FYER 956
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 37/178 (20%)
Query: 39 ALDSYFKVEKIDG--KFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEM--SVKKI 94
+ D Y +VE+++G K+ ++ +K +L P V L LKRF D M ++ KI
Sbjct: 347 SFDKYVEVERLEGDNKYHAEG-HDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI 405
Query: 95 GNHVFFTLELDLQP----YTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVR-SAPD 149
+ F L+LDL Y + +V Y L++V+VH+G + GHY+ F+R + D
Sbjct: 406 NDRYEFPLQLDLDREDGRYLSPDADKSVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSD 464
Query: 150 KWHKFDDSKVT----------SVSGDEVLSQ----------------EAYILVYARQG 181
+W+KFDD +VT G+E L Q AY+LVY R+
Sbjct: 465 QWYKFDDERVTKEDVKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRES 522
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 37/178 (20%)
Query: 39 ALDSYFKVEKIDG--KFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEM--SVKKI 94
+ D Y +VE+++G K+ ++ +K +L P V L LKRF D M ++ KI
Sbjct: 348 SFDKYVEVERLEGDNKYHAEG-HDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI 406
Query: 95 GNHVFFTLELDLQP----YTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVR-SAPD 149
+ F L+LDL Y + +V Y L++V+VH+G + GHY+ F+R + D
Sbjct: 407 NDRYEFPLQLDLDREDGRYLSPDADKSVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSD 465
Query: 150 KWHKFDDSKVT----------SVSGDEVLSQ----------------EAYILVYARQG 181
+W+KFDD +VT G+E L Q AY+LVY R+
Sbjct: 466 QWYKFDDERVTKEDVKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRES 523
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 38/179 (21%)
Query: 39 ALDSYFKVEKIDG--KFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEM--SVKKI 94
+ D Y +VE+++G K+ + +K +L P V L LKRF D M ++ KI
Sbjct: 348 SFDKYVEVERLEGDNKYHAEGHG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI 406
Query: 95 GNHVFFTLELDLQ----PYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVR-SAPD 149
+ F LELDL Y + +V Y L++V+VH+G + GHY+ F+R + D
Sbjct: 407 NDRYEFPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSD 465
Query: 150 KWHKFDDSKVT----------SVSGDEVLSQ-----------------EAYILVYARQG 181
+W+KFDD +VT G+E L Q AY+LVY R+
Sbjct: 466 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRES 524
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 38/179 (21%)
Query: 39 ALDSYFKVEKIDG--KFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEM--SVKKI 94
+ D Y +VE+++G K+ + +K +L P V L LKRF D M ++ KI
Sbjct: 349 SFDKYVEVERLEGDNKYHAEGHG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI 407
Query: 95 GNHVFFTLELDLQ----PYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVR-SAPD 149
+ F LELDL Y + +V Y L++V+VH+G + GHY+ F+R + D
Sbjct: 408 NDRYEFPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSD 466
Query: 150 KWHKFDDSKVT----------SVSGDEVLSQ-----------------EAYILVYARQG 181
+W+KFDD +VT G+E L Q AY+LVY R+
Sbjct: 467 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRES 525
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 38/179 (21%)
Query: 39 ALDSYFKVEKIDG--KFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEM--SVKKI 94
+ D Y +VE+++G K+ + +K +L P V L LKRF D M ++ KI
Sbjct: 349 SFDKYVEVERLEGDNKYHAEGHG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI 407
Query: 95 GNHVFFTLELDLQ----PYTFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFVR-SAPD 149
+ F LELDL Y + +V Y L++V+VH+G + GHY+ F+R + D
Sbjct: 408 NDRYEFPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSD 466
Query: 150 KWHKFDDSKVT----------SVSGDEVLSQ-----------------EAYILVYARQG 181
+W+KFDD +VT G+E L Q AY+LVY R+
Sbjct: 467 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRES 525
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 28/172 (16%)
Query: 35 TIKDALDSYFKVEKI--DGKFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGD--EMS 90
T+ LD + + EK+ D K C SC E KQ+ + + P + LH+KRF +
Sbjct: 362 TLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRFEHSLTRKT 421
Query: 91 VKKIGNHVFFTLELDLQPY---------------TFGAEND-------NVELKYDLYAVV 128
+KI +++ + L++ PY F E + + +++++AVV
Sbjct: 422 SRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSSSPSAEFEIFAVV 481
Query: 129 VHTGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLSQEAYILVYARQ 180
H G SGHY ++R W++ DD+ + V + V E Y+L YA++
Sbjct: 482 THKG-MLESGHYVTYLR-LKGLWYRCDDAWINEVEEEVVRGCECYMLFYAQE 531
>AT4G22350.2 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=539
Length = 539
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 46 VEKIDGKFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTL-EL 104
++K DG+ T T + + K+P H+ RF + +K V F + ++
Sbjct: 399 LKKFDGE-TVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDM 457
Query: 105 DLQPY----TFGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFV-RSAPDKWHKFDDSKV 159
+L+ Y E +NV KY+L A +VH G P G++ FV R + + W++ D V
Sbjct: 458 ELRDYIPSLPRAPEGENVCSKYNLIANIVHDG-KPEDGYFRVFVQRKSQELWYEMQDLHV 516
Query: 160 TSVSGDEVLSQEAYILVYARQ 180
V EAY+ +Y +Q
Sbjct: 517 AETLPQMVELSEAYMQIYEQQ 537
>AT4G22350.1 | Symbols: | Ubiquitin C-terminal hydrolases
superfamily protein | chr4:11804073-11806939 REVERSE
LENGTH=510
Length = 510
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Query: 46 VEKIDGKFTCTSCKEVVSMEKQLLLTKTPSVAALHLKRFMGDEMSVKKIGNHVFFTL-EL 104
++K DG+ T T + + K+P H+ RF + +K V F + ++
Sbjct: 370 LKKFDGE-TVTEVVRPKLARMRYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDM 428
Query: 105 DLQPYT----FGAENDNVELKYDLYAVVVHTGDSPNSGHYFCFV-RSAPDKWHKFDDSKV 159
+L+ Y E +NV KY+L A +VH G P G++ FV R + + W++ D V
Sbjct: 429 ELRDYIPSLPRAPEGENVCSKYNLIANIVHDG-KPEDGYFRVFVQRKSQELWYEMQDLHV 487
Query: 160 TSVSGDEVLSQEAYILVYARQ 180
V EAY+ +Y +Q
Sbjct: 488 AETLPQMVELSEAYMQIYEQQ 508
>AT3G21280.1 | Symbols: UBP7 | ubiquitin-specific protease 7 |
chr3:7478166-7482037 REVERSE LENGTH=532
Length = 532
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 122 YDLYAVVVHTGDSPNSGHYFCFVRSAPDKWHKFDDSKVTSVSGDEVLS-------QEAYI 174
YDL +V+ H G S +SGHY +V+ KW ++DD+ + G++++ AYI
Sbjct: 463 YDLVSVLTHKGRSADSGHYVAWVKQESGKWVQYDDANTSLQRGEDIIKLSGGGDWHMAYI 522
Query: 175 LVY 177
++Y
Sbjct: 523 VMY 525