Miyakogusa Predicted Gene

Lj0g3v0081119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0081119.1 Non Chatacterized Hit- tr|K4DB24|K4DB24_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,33.83,3e-17,seg,NULL; DUF1635,Protein of unknown function
DUF1635; coiled-coil,NULL,CUFF.4186.1
         (270 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28690.1 | Symbols:  | Protein of unknown function (DUF1635) ...    99   4e-21
AT5G59760.1 | Symbols:  | Protein of unknown function (DUF1635) ...    75   5e-14
AT5G22930.1 | Symbols:  | Protein of unknown function (DUF1635) ...    69   2e-12
AT5G09940.1 | Symbols:  | Protein of unknown function (DUF1635) ...    66   2e-11
AT2G28140.1 | Symbols:  | Protein of unknown function (DUF1635) ...    64   1e-10
AT3G44940.1 | Symbols:  | Protein of unknown function (DUF1635) ...    63   2e-10

>AT2G28690.1 | Symbols:  | Protein of unknown function (DUF1635) |
           chr2:12307140-12308477 REVERSE LENGTH=231
          Length = 231

 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 123/265 (46%), Gaps = 75/265 (28%)

Query: 3   DQLGSICDLHEGYEQLRQKLFDTMLELETMRNVKAELSKL-----------LQIAYQERD 51
           ++LGSI    E  ++LRQKL  +  ELE ++    E +KL           L++A QERD
Sbjct: 2   EELGSIWFYQESMDELRQKLQYSSFELEAVKAKANEETKLHQEEVKNLLHLLKLARQERD 61

Query: 52  QAREQLHSLAKKLVPANSNALLENLPEFPPAIKAXXXXXXXXXXXXXXXXPVTPLLQPVS 111
           +A++QL  L    +  NS+    N                          PV    +PVS
Sbjct: 62  EAKDQLQKLLT--IKTNSSITESN---------------------SHGSSPVDSFFEPVS 98

Query: 112 PSPEFS----------XXXXXXXXXHYNFGFQKPATIDFESSVIDYLAKGKVLPQKGKLV 161
            S EFS                     N   +K   ID   +++D + KGK LP+KGKL+
Sbjct: 99  SS-EFSNFNMVPEPINQVKFKNRQQLVNRNLKK---IDPVDALMDEIIKGKALPEKGKLL 154

Query: 162 EAVRDAGSLLETLLVAGPLPKWRNPPPL-TSLKIPPLNIKEYDSLTPASKLNSFGNWWDS 220
           + V ++G LL+TLLVAGPLP+WRNPPPL  S ++PP++             NS+G     
Sbjct: 155 QTVMESGPLLQTLLVAGPLPRWRNPPPLQQSFRVPPIS-------------NSYG----- 196

Query: 221 AQKPTFLPSSHSSEPLPMLNFAGSS 245
                 LP++ ++    MLNF G S
Sbjct: 197 -----CLPATTTTS---MLNFRGCS 213


>AT5G59760.1 | Symbols:  | Protein of unknown function (DUF1635) |
           chr5:24075628-24076415 REVERSE LENGTH=232
          Length = 232

 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 9/80 (11%)

Query: 145 IDYLAKGKVLPQKGKLVEAVRDAGSLLETLLVAGPLPKWRNPPPLTS---LKIPPLNIK- 200
           +D L  GK  P+ GKL++AV +AG LLETLL+AGPLPKW NPPP T     ++P ++ + 
Sbjct: 133 LDVLVMGKAFPETGKLLKAVVEAGPLLETLLLAGPLPKWINPPPQTQSQRFELPSISFRG 192

Query: 201 -----EYDSLTPASKLNSFG 215
                + DS+T +  +NSFG
Sbjct: 193 SDVDSKCDSMTCSGSVNSFG 212


>AT5G22930.1 | Symbols:  | Protein of unknown function (DUF1635) |
           chr5:7668229-7669315 REVERSE LENGTH=238
          Length = 238

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 47/58 (81%), Gaps = 1/58 (1%)

Query: 144 VIDYLAKGKVLPQKGKLVEAVRDAGSLLETLLVAGPLPKWRN-PPPLTSLKIPPLNIK 200
           ++D L + K LP+KGKL++AV  AG LL+TLL+AGPLP+WR+ PPPL S +IPP+ ++
Sbjct: 148 IMDPLLQDKPLPEKGKLLQAVIKAGPLLQTLLLAGPLPQWRHPPPPLKSFEIPPVTVQ 205


>AT5G09940.1 | Symbols:  | Protein of unknown function (DUF1635) |
           chr5:3101192-3101833 FORWARD LENGTH=213
          Length = 213

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 41/57 (71%)

Query: 131 GFQKPATIDFESSVIDYLAKGKVLPQKGKLVEAVRDAGSLLETLLVAGPLPKWRNPP 187
           GF      DFE+ V++ +  G++LP+ GK  +A+ +AGSL+++L + GP+PKWRNPP
Sbjct: 117 GFAFEEKKDFETLVLENIGLGRMLPENGKFQQAIIEAGSLVDSLFITGPIPKWRNPP 173


>AT2G28140.1 | Symbols:  | Protein of unknown function (DUF1635) |
           chr2:11995091-11995808 FORWARD LENGTH=211
          Length = 211

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 90/212 (42%), Gaps = 55/212 (25%)

Query: 16  EQLRQKLFDTMLELETMRNVKAE-----------LSKLLQIAYQERDQAREQLHSLAKKL 64
           E+LR  L  T +ELE  R V +E           L  LL  A +E+D+A+E+      K 
Sbjct: 24  EELRHSLLHTTMELEQTRMVASEELIAKDDQIMQLKDLLNKAIKEKDEAQERY-----KR 78

Query: 65  VPANSNALLENLPEFPPAIKAXXXXXXXXXXXXXXXXPVTPLLQPVSPSPEFSXXXXXXX 124
           +  + N LL++  +                                   P  +       
Sbjct: 79  ILLDQNFLLQHQTD-------------------------------EEQDPNINGFHSSDG 107

Query: 125 XXHYNFGFQKPATIDFESSVIDYLAKGKVLPQKGKLVEAVRDAGSLLETLLVAGPLPKWR 184
                  F+ P  I+ +   +        LP+KGKL++AV  AG LL+TLL+AG LP+WR
Sbjct: 108 EESIVSSFEPPVEIELDFPEM-------TLPEKGKLLKAVVKAGPLLQTLLLAGQLPQWR 160

Query: 185 NPPP-LTSLKIPPLNIKEYDSLTPASKLNSFG 215
           +PPP L S +IPP+ I E   L+  S  N+  
Sbjct: 161 HPPPQLESFEIPPVIIAEGSPLSQDSCGNNLN 192


>AT3G44940.1 | Symbols:  | Protein of unknown function (DUF1635) |
           chr3:16413861-16415134 REVERSE LENGTH=250
          Length = 250

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 41/49 (83%), Gaps = 1/49 (2%)

Query: 152 KVLPQKGKLVEAVRDAGSLLETLLVAGPLPKWRN-PPPLTSLKIPPLNI 199
           K LP+KGKL++AV  AG LL+TLL+AGPLP+WR+ PPPL + +IPP+ I
Sbjct: 165 KPLPEKGKLLQAVIKAGPLLQTLLLAGPLPQWRHPPPPLETSEIPPVTI 213