Miyakogusa Predicted Gene

Lj0g3v0081089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0081089.1 tr|B9S0I7|B9S0I7_RICCO Phosphoglycerate kinase
OS=Ricinus communis GN=RCOM_1355230 PE=3 SV=1,58.08,0,PHOSPHOGLYCERATE
KINASE,NULL; PHOSPHOGLYCERATE KINASE,Phosphoglycerate kinase; no
description,Phosph,CUFF.4188.1
         (688 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12780.1 | Symbols: PGK1 | phosphoglycerate kinase 1 | chr3:4...   178   9e-45
AT1G56190.1 | Symbols:  | Phosphoglycerate kinase family protein...   172   9e-43
AT1G56190.2 | Symbols:  | Phosphoglycerate kinase family protein...   172   1e-42
AT1G79550.2 | Symbols: PGK | phosphoglycerate kinase | chr1:2992...   166   4e-41
AT1G79550.1 | Symbols: PGK | phosphoglycerate kinase | chr1:2992...   166   4e-41
AT5G17660.1 | Symbols:  | tRNA (guanine-N-7) methyltransferase |...   148   2e-35

>AT3G12780.1 | Symbols: PGK1 | phosphoglycerate kinase 1 |
           chr3:4061127-4063140 REVERSE LENGTH=481
          Length = 481

 Score =  178 bits (452), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 200/407 (49%), Gaps = 14/407 (3%)

Query: 82  QTLREFPREELWGKVVMVRFDSKILL--RQEFDQKTRSVLNAVFTIKYLHEAGAQVILVS 139
           +++ +    +L GK V VR D  + L   Q     TR +  A+ TIKYL E GA+VIL +
Sbjct: 80  KSVGDLTSADLKGKKVFVRADLNVPLDDNQTITDDTR-IRAAIPTIKYLIENGAKVILST 138

Query: 140 DWCMK---TSELHTESVADFLTAVLQIQVVPLQG-ISDNKQSKMLGLKKENIHLLENLSH 195
                   T +     +   L+ +L I+V      I    +S +  L +  + LLEN+  
Sbjct: 139 HLGRPKGVTPKFSLAPLVPRLSELLGIEVTKADDCIGPEVESLVASLPEGGVLLLENVRF 198

Query: 196 IKEEVANCLEFARVLSSGVDIFINDSFSNSHKVLASTVGVTRFCYCYACLAGFHFEEKLC 255
            KEE  N  EFA+ L+S  D+++ND+F  +H+  AST GVT+F      +AGF  +++L 
Sbjct: 199 YKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLK--PSVAGFLLQKELD 256

Query: 256 LLKNVAEARRKPYVAIIGGGNLYEKAASFQLLASKCQCFVFVGKMSFQVMHALGVSVPLD 315
            L       ++P+ AI+GG  +  K    + L  KC   +  G M F    A G+SV   
Sbjct: 257 YLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSS 316

Query: 316 LVDQKGIDEALDIVRLAKDRNVQILYPKDFWCRSKCDP-KQLQVFPSHGILNGWVPVDFG 374
           LV++  ++ A +++  AK + V +L P D     K  P    ++ P+ GI +GW+ +D G
Sbjct: 317 LVEEDKLELATELLAKAKAKGVSLLLPTDVVVADKFAPDANSKIVPASGIEDGWMGLDIG 376

Query: 375 PLSLDEIGSMLTNCKKVIWIGPVNFFDSSNDTNGASKLAKILDRQSQCNCEITVVGTMAC 434
           P S+      L   + VIW GP+  F+      G   +A  L   S+      + G  + 
Sbjct: 377 PDSIKTFNEALDTTQTVIWNGPMGVFEMEKFAAGTEAIANKLAELSEKGVTTIIGGGDSV 436

Query: 435 QLVRR--EKSLLSFINMIEGASVVWEFLKGRKLPGVLAIDRAYPFEI 479
             V +     ++S I+   GAS+  E L+G+ LPGV+A+D A P  +
Sbjct: 437 AAVEKVGVAGVMSHISTGGGASL--ELLEGKVLPGVIALDEAIPVTV 481


>AT1G56190.1 | Symbols:  | Phosphoglycerate kinase family protein |
           chr1:21028403-21030454 FORWARD LENGTH=478
          Length = 478

 Score =  172 bits (435), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 195/398 (48%), Gaps = 14/398 (3%)

Query: 91  ELWGKVVMVRFDSKILL--RQEFDQKTRSVLNAVFTIKYLHEAGAQVILVSDWCMK---T 145
           +L GK V VR D  + L   Q     TR +  A+ TIK+L E GA+VIL +        T
Sbjct: 86  DLKGKKVFVRADLNVPLDDNQNITDDTR-IRAAIPTIKFLIENGAKVILSTHLGRPKGVT 144

Query: 146 SELHTESVADFLTAVLQIQVVPLQG-ISDNKQSKMLGLKKENIHLLENLSHIKEEVANCL 204
            +     +   L+ +L I+VV     I    ++ +  L +  + LLEN+   KEE  N  
Sbjct: 145 PKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLLENVRFYKEEEKNEP 204

Query: 205 EFARVLSSGVDIFINDSFSNSHKVLASTVGVTRFCYCYACLAGFHFEEKLCLLKNVAEAR 264
           +FA+ L+S  D+++ND+F  +H+  AST GVT+F      +AGF  +++L  L       
Sbjct: 205 DFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLK--PSVAGFLLQKELDYLVGAVSNP 262

Query: 265 RKPYVAIIGGGNLYEKAASFQLLASKCQCFVFVGKMSFQVMHALGVSVPLDLVDQKGIDE 324
           ++P+ AI+GG  +  K    + L  KC   +  G M F    A G+SV   LV++  ++ 
Sbjct: 263 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLEL 322

Query: 325 ALDIVRLAKDRNVQILYPKDFWCRSKCDP-KQLQVFPSHGILNGWVPVDFGPLSLDEIGS 383
           A  ++  AK R V +L P D     K  P    ++ P+  I +GW+ +D GP S+     
Sbjct: 323 ATTLLAKAKARGVSLLLPTDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSVKTFNE 382

Query: 384 MLTNCKKVIWIGPVNFFDSSNDTNGASKLAKILDRQSQCNCEITVVGTMACQLVRR--EK 441
            L   + VIW GP+  F+      G   +A  L   S+      + G  +   V +    
Sbjct: 383 ALDTTQTVIWNGPMGVFEFEKFAKGTEAVANKLAELSKKGVTTIIGGGDSVAAVEKVGVA 442

Query: 442 SLLSFINMIEGASVVWEFLKGRKLPGVLAIDRAYPFEI 479
            ++S I+   GAS+  E L+G+ LPGV+A+D A P  +
Sbjct: 443 GVMSHISTGGGASL--ELLEGKVLPGVVALDEATPVTV 478


>AT1G56190.2 | Symbols:  | Phosphoglycerate kinase family protein |
           chr1:21028622-21030454 FORWARD LENGTH=405
          Length = 405

 Score =  172 bits (435), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 195/398 (48%), Gaps = 14/398 (3%)

Query: 91  ELWGKVVMVRFDSKILL--RQEFDQKTRSVLNAVFTIKYLHEAGAQVILVSDWCMK---T 145
           +L GK V VR D  + L   Q     TR +  A+ TIK+L E GA+VIL +        T
Sbjct: 13  DLKGKKVFVRADLNVPLDDNQNITDDTR-IRAAIPTIKFLIENGAKVILSTHLGRPKGVT 71

Query: 146 SELHTESVADFLTAVLQIQVVPLQG-ISDNKQSKMLGLKKENIHLLENLSHIKEEVANCL 204
            +     +   L+ +L I+VV     I    ++ +  L +  + LLEN+   KEE  N  
Sbjct: 72  PKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLLENVRFYKEEEKNEP 131

Query: 205 EFARVLSSGVDIFINDSFSNSHKVLASTVGVTRFCYCYACLAGFHFEEKLCLLKNVAEAR 264
           +FA+ L+S  D+++ND+F  +H+  AST GVT+F      +AGF  +++L  L       
Sbjct: 132 DFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLK--PSVAGFLLQKELDYLVGAVSNP 189

Query: 265 RKPYVAIIGGGNLYEKAASFQLLASKCQCFVFVGKMSFQVMHALGVSVPLDLVDQKGIDE 324
           ++P+ AI+GG  +  K    + L  KC   +  G M F    A G+SV   LV++  ++ 
Sbjct: 190 KRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLEL 249

Query: 325 ALDIVRLAKDRNVQILYPKDFWCRSKCDP-KQLQVFPSHGILNGWVPVDFGPLSLDEIGS 383
           A  ++  AK R V +L P D     K  P    ++ P+  I +GW+ +D GP S+     
Sbjct: 250 ATTLLAKAKARGVSLLLPTDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSVKTFNE 309

Query: 384 MLTNCKKVIWIGPVNFFDSSNDTNGASKLAKILDRQSQCNCEITVVGTMACQLVRR--EK 441
            L   + VIW GP+  F+      G   +A  L   S+      + G  +   V +    
Sbjct: 310 ALDTTQTVIWNGPMGVFEFEKFAKGTEAVANKLAELSKKGVTTIIGGGDSVAAVEKVGVA 369

Query: 442 SLLSFINMIEGASVVWEFLKGRKLPGVLAIDRAYPFEI 479
            ++S I+   GAS+  E L+G+ LPGV+A+D A P  +
Sbjct: 370 GVMSHISTGGGASL--ELLEGKVLPGVVALDEATPVTV 405


>AT1G79550.2 | Symbols: PGK | phosphoglycerate kinase |
           chr1:29924347-29926295 REVERSE LENGTH=401
          Length = 401

 Score =  166 bits (420), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 189/401 (47%), Gaps = 13/401 (3%)

Query: 81  IQTLREFPREELWGKVVMVRFDSKILL--RQEFDQKTRSVLNAVFTIKYLHEAGAQVILV 138
           + TL+E    +L GK V VR D  + L         TR +  AV TIKYL   G++V+L 
Sbjct: 7   VGTLKE---ADLKGKSVFVRVDLNVPLDDNSNITDDTR-IRAAVPTIKYLMGNGSRVVLC 62

Query: 139 SDWCMK---TSELHTESVADFLTAVLQIQVVPLQ-GISDNKQSKMLGLKKENIHLLENLS 194
           S        T +   + +   L+ +L ++VV     I +  Q  + GL +  + LLEN+ 
Sbjct: 63  SHLGRPKGVTPKYSLKPLVPRLSELLGVEVVMANDSIGEEVQKLVAGLPEGGVLLLENVR 122

Query: 195 HIKEEVANCLEFARVLSSGVDIFINDSFSNSHKVLASTVGVTRFCYCYACLAGFHFEEKL 254
              EE  N  EFA+ L++  D+++ND+F  +H+  AST GV +F      +AGF  +++L
Sbjct: 123 FYAEEEKNDPEFAKKLAALADVYVNDAFGTAHRAHASTEGVAKF--LKPSVAGFLMQKEL 180

Query: 255 CLLKNVAEARRKPYVAIIGGGNLYEKAASFQLLASKCQCFVFVGKMSFQVMHALGVSVPL 314
             L       +KP+ AI+GG  +  K    + L +     +  G M F    A G+SV  
Sbjct: 181 DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLNTVDILLLGGGMIFTFYKAQGLSVGS 240

Query: 315 DLVDQKGIDEALDIVRLAKDRNVQILYPKDFWCRSKCDP-KQLQVFPSHGILNGWVPVDF 373
            LV++  +D A  ++  AK + V +L P D     K  P    ++ P+  I +GW+ +D 
Sbjct: 241 SLVEEDKLDLAKSLMEKAKAKGVSLLLPTDVVIADKFAPDANSKIVPATAIPDGWMGLDI 300

Query: 374 GPLSLDEIGSMLTNCKKVIWIGPVNFFDSSNDTNGASKLAKILDRQSQCNCEITVVGTMA 433
           GP S+      L   K +IW GP+  F+      G   +AK L   S       + G  +
Sbjct: 301 GPDSIKTFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAVAKQLAELSGKGVTTIIGGGDS 360

Query: 434 CQLVRREKSLLSFINMIEGASVVWEFLKGRKLPGVLAIDRA 474
              V +        ++  G     E L+G+ LPGVLA+D A
Sbjct: 361 VAAVEKVGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 401


>AT1G79550.1 | Symbols: PGK | phosphoglycerate kinase |
           chr1:29924347-29926295 REVERSE LENGTH=401
          Length = 401

 Score =  166 bits (420), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 189/401 (47%), Gaps = 13/401 (3%)

Query: 81  IQTLREFPREELWGKVVMVRFDSKILL--RQEFDQKTRSVLNAVFTIKYLHEAGAQVILV 138
           + TL+E    +L GK V VR D  + L         TR +  AV TIKYL   G++V+L 
Sbjct: 7   VGTLKE---ADLKGKSVFVRVDLNVPLDDNSNITDDTR-IRAAVPTIKYLMGNGSRVVLC 62

Query: 139 SDWCMK---TSELHTESVADFLTAVLQIQVVPLQ-GISDNKQSKMLGLKKENIHLLENLS 194
           S        T +   + +   L+ +L ++VV     I +  Q  + GL +  + LLEN+ 
Sbjct: 63  SHLGRPKGVTPKYSLKPLVPRLSELLGVEVVMANDSIGEEVQKLVAGLPEGGVLLLENVR 122

Query: 195 HIKEEVANCLEFARVLSSGVDIFINDSFSNSHKVLASTVGVTRFCYCYACLAGFHFEEKL 254
              EE  N  EFA+ L++  D+++ND+F  +H+  AST GV +F      +AGF  +++L
Sbjct: 123 FYAEEEKNDPEFAKKLAALADVYVNDAFGTAHRAHASTEGVAKF--LKPSVAGFLMQKEL 180

Query: 255 CLLKNVAEARRKPYVAIIGGGNLYEKAASFQLLASKCQCFVFVGKMSFQVMHALGVSVPL 314
             L       +KP+ AI+GG  +  K    + L +     +  G M F    A G+SV  
Sbjct: 181 DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLNTVDILLLGGGMIFTFYKAQGLSVGS 240

Query: 315 DLVDQKGIDEALDIVRLAKDRNVQILYPKDFWCRSKCDP-KQLQVFPSHGILNGWVPVDF 373
            LV++  +D A  ++  AK + V +L P D     K  P    ++ P+  I +GW+ +D 
Sbjct: 241 SLVEEDKLDLAKSLMEKAKAKGVSLLLPTDVVIADKFAPDANSKIVPATAIPDGWMGLDI 300

Query: 374 GPLSLDEIGSMLTNCKKVIWIGPVNFFDSSNDTNGASKLAKILDRQSQCNCEITVVGTMA 433
           GP S+      L   K +IW GP+  F+      G   +AK L   S       + G  +
Sbjct: 301 GPDSIKTFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAVAKQLAELSGKGVTTIIGGGDS 360

Query: 434 CQLVRREKSLLSFINMIEGASVVWEFLKGRKLPGVLAIDRA 474
              V +        ++  G     E L+G+ LPGVLA+D A
Sbjct: 361 VAAVEKVGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 401


>AT5G17660.1 | Symbols:  | tRNA (guanine-N-7) methyltransferase |
           chr5:5818778-5820811 REVERSE LENGTH=312
          Length = 312

 Score =  148 bits (373), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 116/199 (58%), Gaps = 3/199 (1%)

Query: 481 WNSIYSDPAQPLAVDIGSGNGLFLLEMAKRR-KHLNFLGLEINEKLVLRCLDSIHQFRIK 539
           W+ +Y DP+ PL VDIGSG+G FLL  A +  +  N+LGLEI +KLV R    +++  + 
Sbjct: 116 WDEVYKDPSLPLMVDIGSGSGRFLLWQANKNVESRNYLGLEIRQKLVKRANFWVNELGLS 175

Query: 540 NGYFIATNATSTFRSIISTYPGELVIVSIQCPNPDFNKPEHRWRMLQRSLIEPVVDLLAS 599
           N +FI  NA  +F  +IS+YPG L IVSI CP+P F K   + R++Q+ L+  ++  L  
Sbjct: 176 NVHFIFANAMVSFEHLISSYPGPLEIVSILCPDPHFKKRHQKRRVVQKPLVNSILQNLKP 235

Query: 600 DGKVFLQSDVKDVAIRMKEQFLRYGKGKLELEPDKCNGQSEWLKENPFGVMSDWEKHVLE 659
            GK+F+QSDV DVA  M++Q          +  D  + +  WL ENP G+ ++ E H   
Sbjct: 236 GGKIFVQSDVLDVAQDMRDQLDEESNVLQHM--DTVDTEDGWLTENPMGIRTEREIHAEF 293

Query: 660 RGAPMYRMMFSKSSATSEV 678
            GA +YR ++ K     E 
Sbjct: 294 EGARIYRRLYQKRQLLPET 312