Miyakogusa Predicted Gene

Lj0g3v0079939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0079939.1 tr|A4S6J9|A4S6J9_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_88968,37.33,2e-18,seg,NULL; UNCHARACTERIZED,NULL,CUFF.4110.1
         (308 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65290.1 | Symbols:  | LMBR1-like membrane protein | chr5:260...   283   1e-76
AT5G65290.2 | Symbols:  | LMBR1-like membrane protein | chr5:260...   210   1e-54

>AT5G65290.1 | Symbols:  | LMBR1-like membrane protein |
           chr5:26089814-26094337 FORWARD LENGTH=733
          Length = 733

 Score =  283 bits (723), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 153/326 (46%), Positives = 211/326 (64%), Gaps = 26/326 (7%)

Query: 1   MYMCVCTYFSLFKMGTMMFYSLTPRQTSSVSLLMICSMVARYAAPISYNFLNLINLGGDR 60
           +YMCVCTY+SLFK+G +M YSLTPRQTSSV+LLMICSM+ARYA PISYNF+NLI L  + 
Sbjct: 401 VYMCVCTYYSLFKIGMLMIYSLTPRQTSSVNLLMICSMIARYAPPISYNFINLIQLHSE- 459

Query: 61  KTIFEKRMGNIDDAVPFFGKGFNKIYPVIMVIYTSLIAGNFFNRVITYCGNWRIFKFSDD 120
            TIFEK+MG IDDAVP FG+ FN+IYP+IMVIYT L+A NFF+R+  Y G+W+ F+F  +
Sbjct: 460 -TIFEKKMGRIDDAVPVFGQRFNEIYPLIMVIYTLLVASNFFDRIFNYFGSWKRFRFQTE 518

Query: 121 AEDMDGFDPSGVIILQRERSLIQQGHKVGELVFPLARSFSMSVDVESAS----GTAMVLD 176
            ED DGFDPSG++IL++ER+ +++G KVGE V PLAR+F+  VD+E  S     +++ + 
Sbjct: 519 TEDTDGFDPSGLMILKKERTWLEEGQKVGEHVLPLARNFN-DVDIEPGSNFSENSSVEMK 577

Query: 177 ESINTNLVEAENEGTQSELSRKISS------RKYAALRPNLNEEDSSKDLNQEGVSSSLT 230
            S + ++   +   ++ ++SRK  S       KYAA+R   N+   S     E ++S+  
Sbjct: 578 MSSSYDIDTLKGSSSKDDMSRKYGSAREAITNKYAAIREQQNKHSPSSMTKPENMASAKV 637

Query: 231 ------NDAXXXXXXXXXXXXALASKWTSMMHGLKSFRSNMDSNRFIPL-----GNAQTS 279
                 N               LAS W +M  G++SF+ N+ + +F+PL       A TS
Sbjct: 638 SLLETDNSGPSNGQGSGEPSSRLASTWRNMKLGIQSFKENVATKKFLPLRQSPETTALTS 697

Query: 280 THSHPSS--ESLDDIFERLKLPPSEH 303
           T    SS  +SLD+IF+RLK    EH
Sbjct: 698 TRVVTSSVPQSLDEIFQRLKNRSVEH 723


>AT5G65290.2 | Symbols:  | LMBR1-like membrane protein |
           chr5:26089814-26093617 FORWARD LENGTH=548
          Length = 548

 Score =  210 bits (534), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 94/142 (66%), Positives = 119/142 (83%), Gaps = 2/142 (1%)

Query: 1   MYMCVCTYFSLFKMGTMMFYSLTPRQTSSVSLLMICSMVARYAAPISYNFLNLINLGGDR 60
           +YMCVCTY+SLFK+G +M YSLTPRQTSSV+LLMICSM+ARYA PISYNF+NLI L  + 
Sbjct: 401 VYMCVCTYYSLFKIGMLMIYSLTPRQTSSVNLLMICSMIARYAPPISYNFINLIQLHSE- 459

Query: 61  KTIFEKRMGNIDDAVPFFGKGFNKIYPVIMVIYTSLIAGNFFNRVITYCGNWRIFKFSDD 120
            TIFEK+MG IDDAVP FG+ FN+IYP+IMVIYT L+A NFF+R+  Y G+W+ F+F  +
Sbjct: 460 -TIFEKKMGRIDDAVPVFGQRFNEIYPLIMVIYTLLVASNFFDRIFNYFGSWKRFRFQTE 518

Query: 121 AEDMDGFDPSGVIILQRERSLI 142
            ED DGFDPSG++IL++ ++ I
Sbjct: 519 TEDTDGFDPSGLMILKKGKNTI 540