Miyakogusa Predicted Gene

Lj0g3v0079879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0079879.1 Non Chatacterized Hit- tr|A5B1T3|A5B1T3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.2,0.00000000000005,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,BURP domain; BURP,BURP domain,CUFF.4100.1
         (200 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G25610.1 | Symbols: RD22, ATRD22 | BURP domain-containing pro...   175   1e-44
AT1G49320.1 | Symbols: ATUSPL1, USPL1 | unknown seed protein lik...   119   1e-27
AT1G60390.1 | Symbols: PG1 | polygalacturonase 1 | chr1:22247611...   104   3e-23
AT1G70370.2 | Symbols: PG2 | polygalacturonase 2 | chr1:26513003...    93   1e-19
AT1G70370.1 | Symbols: PG2 | polygalacturonase 2 | chr1:26513003...    93   1e-19
AT1G23760.1 | Symbols: JP630, PG3 | BURP domain-containing prote...    91   5e-19

>AT5G25610.1 | Symbols: RD22, ATRD22 | BURP domain-containing
           protein | chr5:8914498-8916684 REVERSE LENGTH=392
          Length = 392

 Score =  175 bits (444), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 90/192 (46%), Positives = 129/192 (67%), Gaps = 10/192 (5%)

Query: 12  FLPDKVAKSIPFSSNRISEILNHFNIEAKSSDAETLEHTIDTCELPAIGGVDKYCATSME 71
           FLP   A+++PF S + SE L  F++EA S +AE ++ TI+ CE   + G +KYCATS+E
Sbjct: 204 FLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLE 263

Query: 72  SLVNFTVSKLGK-NIRLVSSTVLLEKETQKKKP-QQYSV-LKGVQKLG-DIAVACHKMNY 127
           S+V+F+VSKLGK ++R VS+ V      +K  P Q+Y +   GV+KL  D +V CHK  Y
Sbjct: 264 SMVDFSVSKLGKYHVRAVSTEV-----AKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQKY 318

Query: 128 LYAVFYCHK-VATRPYSVPLMASDVTKAKALAVCHTDTAQWSNNSIGLKQLKIKPGTLPV 186
            +AVFYCHK + T  Y+VPL   +  +AKA+AVCH +T+ W+ N +  K LK+KPGT+PV
Sbjct: 319 PFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPV 378

Query: 187 CHFVAADSLLWI 198
           CHF+    ++W 
Sbjct: 379 CHFLPETHVVWF 390


>AT1G49320.1 | Symbols: ATUSPL1, USPL1 | unknown seed protein like 1
           | chr1:18246441-18247817 FORWARD LENGTH=280
          Length = 280

 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 107/188 (56%), Gaps = 7/188 (3%)

Query: 18  AKSIPFSSNRISEILNHFNIEAKSSDAETLEHTIDTCELPAIGGVDKYCATSMESLVNFT 77
           A  IPF+ +++  +L+HF+I   S   + ++ T+  C+  AI G  K+C TS+ESL++  
Sbjct: 91  ADLIPFTKSKLDFLLDHFSITKDSPQGKAIKETLGHCDAKAIEGEHKFCGTSLESLIDLV 150

Query: 78  VSKLGKNIRL--VSSTVLLEKETQKKKP-QQYSVLKGVQKLGDI-AVACHKMNYLYAVFY 133
              +G N+ L  +++ V++  +         Y+ ++  ++L  I  + CH+M Y YAV+Y
Sbjct: 151 KKTMGYNVDLKVMTTKVMVPAQNSISYALHNYTFVEAPKELVGIKMLGCHRMPYPYAVYY 210

Query: 134 C--HKVATRPYSVPLMASD-VTKAKALAVCHTDTAQWSNNSIGLKQLKIKPGTLPVCHFV 190
           C  HK  +R + V L+  D   +    AVCH DT+ W  + +  K LK++P + PVCHF 
Sbjct: 211 CHGHKGGSRVFEVNLVTDDGRQRVVGPAVCHMDTSTWDADHVAFKVLKMEPRSAPVCHFF 270

Query: 191 AADSLLWI 198
             D+++W+
Sbjct: 271 PLDNIVWV 278


>AT1G60390.1 | Symbols: PG1 | polygalacturonase 1 |
           chr1:22247611-22249556 REVERSE LENGTH=624
          Length = 624

 Score =  104 bits (260), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 10/192 (5%)

Query: 11  TFLPDKVAKSIPFSSNRISEILNHFNIEAKSSDAETLEHTIDTCELPAIGGVDKYCATSM 70
           TFLP  + K++PFSS+ I EI   F     SS A  +   +  CE PA  G  K C  S 
Sbjct: 434 TFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSA 493

Query: 71  ESLVNFTVSKLGKNIRLVSSTVLLEKETQKKKPQQYSVLKGVQKLGDI--AVACHKMNYL 128
           E +++F  S LG+ + +V +T   E     KK      + G+   GD+  AV+CH+  Y 
Sbjct: 494 EDMIDFATSVLGRGV-VVRTT---ENVVGSKKKVVIGKVNGING-GDVTRAVSCHQSLYP 548

Query: 129 YAVFYCHKVA-TRPYSVPLMASDVTKA--KALAVCHTDTAQWSNNSIGLKQLKIKPGTLP 185
           Y ++YCH V   R Y   L+     +     +A+CH DT+ WS +      L   PG + 
Sbjct: 549 YLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIE 608

Query: 186 VCHFVAADSLLW 197
           VCH++  + + W
Sbjct: 609 VCHWIFENDMTW 620


>AT1G70370.2 | Symbols: PG2 | polygalacturonase 2 |
           chr1:26513003-26514998 REVERSE LENGTH=626
          Length = 626

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 10/192 (5%)

Query: 11  TFLPDKVAKSIPFSSNRISEILNHFNIEAKSSDAETLEHTIDTCELPAIGGVDKYCATSM 70
           +FLP  +   +PFS++++ EI   F+    S+    +   +  CE P   G  K C  S 
Sbjct: 436 SFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSA 495

Query: 71  ESLVNFTVSKLGKNIRLVSSTVLLEKETQKKKPQQYSVLKGVQ--KLGDIAVACHKMNYL 128
           E +++F  S LG+++ L ++    E     K+      + G+   KL   AV+CH+  Y 
Sbjct: 496 EDMIDFATSVLGRSVVLRTT----ENVAGSKEKVVIGKVNGINGGKLTK-AVSCHQSLYP 550

Query: 129 YAVFYCHKV-ATRPYSVPLMASDVTKA--KALAVCHTDTAQWSNNSIGLKQLKIKPGTLP 185
           Y ++YCH V   R Y   L+  +  K     +A+CH DT+ W  +      L  KPG + 
Sbjct: 551 YLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIE 610

Query: 186 VCHFVAADSLLW 197
           VCH++  + + W
Sbjct: 611 VCHWIFENDMNW 622


>AT1G70370.1 | Symbols: PG2 | polygalacturonase 2 |
           chr1:26513003-26514998 REVERSE LENGTH=626
          Length = 626

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 10/192 (5%)

Query: 11  TFLPDKVAKSIPFSSNRISEILNHFNIEAKSSDAETLEHTIDTCELPAIGGVDKYCATSM 70
           +FLP  +   +PFS++++ EI   F+    S+    +   +  CE P   G  K C  S 
Sbjct: 436 SFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSA 495

Query: 71  ESLVNFTVSKLGKNIRLVSSTVLLEKETQKKKPQQYSVLKGVQ--KLGDIAVACHKMNYL 128
           E +++F  S LG+++ L ++    E     K+      + G+   KL   AV+CH+  Y 
Sbjct: 496 EDMIDFATSVLGRSVVLRTT----ENVAGSKEKVVIGKVNGINGGKLTK-AVSCHQSLYP 550

Query: 129 YAVFYCHKV-ATRPYSVPLMASDVTKA--KALAVCHTDTAQWSNNSIGLKQLKIKPGTLP 185
           Y ++YCH V   R Y   L+  +  K     +A+CH DT+ W  +      L  KPG + 
Sbjct: 551 YLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIE 610

Query: 186 VCHFVAADSLLW 197
           VCH++  + + W
Sbjct: 611 VCHWIFENDMNW 622


>AT1G23760.1 | Symbols: JP630, PG3 | BURP domain-containing protein
           | chr1:8402142-8404147 FORWARD LENGTH=622
          Length = 622

 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 12/193 (6%)

Query: 11  TFLPDKVAKSIPFSSNRISEILNHFNIEAKSSDAETLEHTIDTCELPAIGGVDKYCATSM 70
           +FLP  +   +PFS+++I+EI   F+    S+    +   +  CE P      K C  S 
Sbjct: 432 SFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSA 491

Query: 71  ESLVNFTVSKLGKNIRLVSSTVLLEKETQKKKPQQYSVLKGVQKLGDI--AVACHKMNYL 128
           E +++F  S LG+++ L ++    E     K+      + G+   G +  +V+CH+  Y 
Sbjct: 492 EDMIDFATSVLGRSVVLRTT----ESVAGSKEKVMIGKVNGING-GRVTKSVSCHQSLYP 546

Query: 129 YAVFYCHKV-ATRPYSVPLMASDVTKAK---ALAVCHTDTAQWSNNSIGLKQLKIKPGTL 184
           Y ++YCH V   R Y   L+    +KAK    +A+CH DT+ W  N      L  +PG +
Sbjct: 547 YLLYYCHSVPKVRVYESDLLDPK-SKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQI 605

Query: 185 PVCHFVAADSLLW 197
            VCH++  + + W
Sbjct: 606 EVCHWIFENDMNW 618