Miyakogusa Predicted Gene
- Lj0g3v0079829.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0079829.1 tr|B9MZK2|B9MZK2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595495 PE=4
SV=1,31.76,5e-19,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT,CUFF.4097.1
(180 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 2e-32
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 132 1e-31
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-31
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 2e-30
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 2e-29
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 4e-29
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 5e-29
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 7e-29
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 123 7e-29
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-28
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-28
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 8e-28
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 7e-27
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 1e-26
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-26
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 2e-26
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 4e-26
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 7e-26
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-25
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-24
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-24
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 3e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 5e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-22
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 95 3e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 2e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 2e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-19
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 91 3e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 89 1e-18
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-18
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 4e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-18
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 87 4e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 7e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 2e-17
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 3e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 3e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 3e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 3e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 3e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 3e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 5e-17
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 4e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 5e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 5e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 80 5e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-16
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 7e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 4e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 4e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 77 5e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 6e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-15
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 77 6e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 7e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 8e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 8e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 8e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-14
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 75 2e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-14
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 9e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 73 1e-13
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 73 1e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 4e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 4e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 5e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 5e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 9e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 1e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 2e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 2e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 4e-12
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 4e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 4e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 8e-12
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-11
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 6e-11
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 6e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-10
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 63 1e-10
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 63 1e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-10
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 62 3e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 5e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 5e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-10
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 9e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 60 1e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 59 1e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 59 2e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 3e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 4e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 57 8e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-09
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 1e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 56 2e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-08
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 53 1e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 53 1e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-07
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 52 2e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 50 6e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 1e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-06
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 49 1e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 49 2e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 49 2e-06
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 3e-06
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 3e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 3e-06
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 5e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 7e-06
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 135 bits (339), Expect = 2e-32, Method: Composition-based stats.
Identities = 59/147 (40%), Positives = 99/147 (67%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ LF ++ R P++I+F+++ + + KTK Y + ++L QME +GI ++ TL+I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INC+C ++ +AFS + KI+K GY+PNTITF+TLI GLCL +V AL+ D ++ G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + ++ L+NGLC G+ A+ L+
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLI 216
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 80/148 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L +R+++M H P +I N ++ L + + A+ L +M G P+ VT +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C GQ ++A +L K+ +R K + + ++ +I GLC + + A +E+ +GI
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y ILI G C G+ +LLR
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLR 322
Score = 82.4 bits (202), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 78/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A LFN + T +II +N ++ + L M R I P++VT ++L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + G++ A + +++ RG P+TIT+T+LI G C + + +A Q D ++++G
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N ++ ILING CK + L L R
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFR 427
Score = 80.9 bits (198), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 71/131 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I FN ++ K + L +M RG++ D VT N LI +C LG+++VA +
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++ R PN +T+ L+ GLC N + ++AL+ +++ ++L+ Y I+I+G+C
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 169 VGQTRAALRLL 179
+ A L
Sbjct: 521 ASKVDDAWDLF 531
Score = 77.4 bits (189), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 79/145 (54%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +++++ + P+ I F+ ++ L S A+ L +M G PD++T+N L+N
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G+ + A ++ K+++ G +PN +T+ ++ +C + Q A++ ++ + I+L
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V Y I+I+GLCK G A L
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLF 286
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 68/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I + ++ K H A + M +G P+I T NILIN YC ++ +
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+ RG +T+T+ TLI+G C ++ A + E++++ + N V+Y IL++GLC
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 169 VGQTRAALRLL 179
G++ AL +
Sbjct: 486 NGESEKALEIF 496
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 67/117 (57%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
++++ I+ L K A +L ++ME +GI +I+T NILI +C+ G+ +L
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++KR PN +TF+ LI +++ A + H E++ +GI + ++Y LI+G CK
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Score = 77.0 bits (188), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D L +++ + P+++ F+ ++ VK A L +M RGI PD +T L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C + A ++ ++ +G PN TF LI G C +++ L+ ++ +G+
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y LI G C++G+ A L +
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQ 462
Score = 47.0 bits (110), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 65/147 (44%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LF ++ + P+I+ + +L L A+ + ++E + DI NI+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C+ ++ A+ + + +G KP T+ +I GLC + A ++ G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y ILI G +++L+
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLI 601
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 132 bits (332), Expect = 1e-31, Method: Composition-based stats.
Identities = 59/148 (39%), Positives = 96/148 (64%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ LF +++ R PS+++F++ + + +TK +++ + Q+E GI +I TLNI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INC+C + A+SVL K++K GY+P+T TF TLIKGL L +V A+ D ++ G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q + V+Y ++NG+C+ G T AL LLR
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLR 217
Score = 90.1 bits (222), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 80/148 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
ND L ++ P++I FN +L VK A L +M RGI P+I+T N L
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ YC ++S A ++L +++ P+ +TFT+LIKG C+ +V ++ + +G+
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y IL+ G C+ G+ + A L +
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQ 427
Score = 81.3 bits (199), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 76/146 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + +++++ + P FN ++ L S A+ L +M G PD+VT N ++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G S+A +L K+ +R K + T++T+I LC + + A+ E+ +GI+
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y L+ GLCK G+ LL+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLK 287
Score = 73.9 bits (180), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRL--------LQMRH--TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D C+ NRL L +R+ +P I+ F ++ K + + + RG++
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
+ VT +IL+ +C G++ +A + +++ G P+ +T+ L+ GLC N ++++AL+
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++L + L V Y +I G+CK G+ A L
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Score = 70.5 bits (171), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 74/146 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LF + S++ +N ++ L K ++ L M R I+P+++T N+L++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ G++ A + +++ RG PN IT+ TL+ G C+ +++ A D ++
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ V++ LI G C V + +++ R
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFR 392
Score = 69.7 bits (169), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 81/148 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L +R+++ P ++ +N I+ + ++ S+A+ L +ME R + D+ T + +
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G + A S+ ++ +G K + +T+ +L++GLC + +++++ I
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N +++ +L++ K G+ + A L +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYK 322
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 76/148 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D + +F + + + + ++ ++ ++ +A L +M G++PD++T IL
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A + + K + +TT+I+G+C +V+ A L +G+
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N ++Y ++I+GLCK G A LLR
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLR 532
Score = 63.2 bits (152), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 70/145 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L ++ + + ++ I+ L + AISL +ME +GI +VT N L+
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G+ + +L ++ R PN ITF L+ +++ A + + E++ +GI
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N ++Y L++G C + A +L
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML 356
Score = 46.6 bits (109), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 61/142 (42%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++ P ++ + +L L A+ + ++ + IV +I C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A+++ + +G KPN +T+T +I GLC + A ++ G N
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y LI + G A+ +L+
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLI 566
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 132 bits (332), Expect = 1e-31, Method: Composition-based stats.
Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 35/183 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV LF ++Q R P++I+FN++ + + KTK Y + ++L QME +GI I TL+I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNT------------------------------- 121
INC+C ++S AFS + KI+K GY+P+T
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 122 ----ITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
IT TL+ GLCLN +V A+ D ++ G Q N+V+YG ++N +CK GQT A+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 178 LLR 180
LLR
Sbjct: 250 LLR 252
Score = 86.3 bits (212), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 80/148 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A LFN + II +N ++ + L M R I P++VT ++L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + G++ A +L ++++RG PNTIT+ +LI G C ++++ A+Q D ++++G
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +++ ILING CK + L L R
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFR 427
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 77/142 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L ++Q P+ I +N ++ K AI + M +G PDI+T NILIN YC
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ + ++ RG NT+T+ TL++G C + +++ A + E++++ ++ + V
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY IL++GLC G+ AL +
Sbjct: 475 SYKILLDGLCDNGELEKALEIF 496
Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 79/148 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L +R+++M H P++I N ++ L S A+ L +M G P+ VT +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C GQ ++A +L K+ +R K + + ++ +I GLC + + A +E+ +G
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + ++Y LI G C G+ +LLR
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLR 322
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 78/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D L +++ + +P+++ F+ ++ VK A L +M RGI P+ +T N L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C ++ A ++ ++ +G P+ +TF LI G C +++ L+ E+ +G+
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y L+ G C+ G+ A +L +
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 70/128 (54%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
++++ I+ L K A +L ++ME +G DI+T N LI +C+ G+ +L
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++KR PN +TF+ LI +++ A Q E++ +GI N ++Y LI+G CK +
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 172 TRAALRLL 179
A++++
Sbjct: 384 LEEAIQMV 391
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 77/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ + + ++ P I+ FN ++ K + L +M RG++ + VT N L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C G++ VA + +++ R +P+ +++ L+ GLC N ++++AL+ ++ ++
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
L+ Y I+I+G+C + A L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLF 531
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 69/148 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D + LF + + + +N ++ ++ +A L +M R + PDIV+ IL
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A + KI K + + + +I G+C +V A L +G+
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+L+ +Y I+I+ LC+ A L R
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFR 567
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 128 bits (322), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 96/147 (65%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV LF + + R P +I+F+++ + + +TK Y + + L QME +GI ++ TL+I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INC C ++S+AFS + KI+K GY+P+T+TF+TLI GLCL +V AL+ D ++ G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++ L+NGLC G+ A+ L+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLI 200
Score = 79.7 bits (195), Expect = 9e-16, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 35/182 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV L +R+++ P+ + + +L + K+ ++A+ L +ME R I D V +I+
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC-----------LNDQVKR-- 139
I+ C G + AF++ ++ +G+K + I +TTLI+G C L D +KR
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 140 ----------------------ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
A + H E++ +GI + V+Y LI+G CK Q A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 178 LL 179
+L
Sbjct: 374 ML 375
Score = 79.7 bits (195), Expect = 9e-16, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D L +++ + TP ++ F+ ++ VK A L +M RGI PD VT L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C Q+ A +L ++ +G PN TF LI G C + + L+ ++ +G+
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y LI G C++G+ A L +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQ 446
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A LFN + II + ++ + L M R I PD+V + L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+C+ G++ A + ++++RG P+T+T+T+LI G C +Q+ +A D ++++G
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N ++ ILING CK L L R
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFR 411
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
D C N+L + H P+I FN ++ K + L +M RG++
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
D VT N LI +C LG++ VA + +++ R +P+ +++ L+ GLC N + ++AL+
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+++ ++L+ Y I+I+G+C + A L
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 77/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L +R+++M H P++I N ++ L S A+ L +M G P+ VT +
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C GQ ++A +L K+ +R K + + ++ +I GLC + + A +E+ +G
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + + Y LI G C G+ +LLR
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Score = 74.3 bits (181), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 72/142 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L ++Q +P + + ++ K A + M +G P+I T NILIN YC
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ + K+ RG +T+T+ TLI+G C +++ A + E++++ ++ + V
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY IL++GLC G+ AL +
Sbjct: 459 SYKILLDGLCDNGEPEKALEIF 480
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 62/142 (43%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++ R P I+ + +L L A+ + ++E + DI NI+I+ C
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ ++ A+ + + +G KP+ T+ +I GLC + A ++ G N
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y ILI G + +L+
Sbjct: 564 TYNILIRAHLGEGDATKSAKLI 585
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 35/183 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV LF +++ R PSI+EFNK+L+ + K + + ISL QM+ GI D+ T +I
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 93 INCYCHLGQMSVAFSVLAKILK-----------------------------------RGY 117
INC+C Q+S+A +VLAK++K GY
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
KP+T TFTTLI GL L+++ A+ D+++ +G Q + V+YG ++NGLCK G AL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 178 LLR 180
LL+
Sbjct: 245 LLK 247
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Query: 25 HSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
+ HS+ + +DAV L +++++M + P F ++ L S A++L QM RG P
Sbjct: 163 YCHSKRI-SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D+VT ++N C G + +A S+L K+ K + + + + T+I GLC + AL
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ +GI+ + +Y LI+ LC G+ A RLL
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 76/133 (57%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L ++ + + ++ +N I+ L K KH A++L +M+ +GI PD+ T + LI+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C+ G+ S A +L+ +++R PN +TF+ LI ++ A + +DE++ + I
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 155 NQVSYGILINGLC 167
+ +Y LING C
Sbjct: 362 DIFTYSSLINGFC 374
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + +++ + P+++ F+ ++ VK A L +M R I PDI T + L
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C ++ A + ++ + PN +T++TLIKG C +V+ ++ E+ +G+
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 153 QLNQVSYGILINGL 166
N V+Y LI+G
Sbjct: 430 VGNTVTYTTLIHGF 443
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Query: 10 HRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI 69
++ TF L H+++ ++AV L ++++Q P ++ + ++ L K +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKA--SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+SL +ME I D+V N +I+ C M A ++ ++ +G +P+ T+++LI
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
LC + A + +++ + I N V++ LI+ K G+ A +L
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+ C+ +RL + +H P+++ ++ ++ K K + L +M RG++
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
+ VT LI+ + A V +++ G PN +T+ L+ GLC N ++ +A+
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ L ++ + +Y I+I G+CK G+ L
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + Q + + + ++ + + A + QM G+ P+I+T NIL++ C
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+++ A V + + +P+ T+ +I+G+C +V+ + L +G+ N +
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y +I+G C+ G A LL+
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLK 562
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F +++ + P+I+ +N +L L K + A+ + ++ + PDI T NI+
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G++ + + + +G PN I + T+I G C + A ++ G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y LI + G A+ L++
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIK 597
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F L + P I +N ++ + K L + +G+ P+++ N +I+
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G A S+L K+ + G PN+ T+ TLI+ + + + + E+ + G
Sbjct: 547 GFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAG 606
Query: 155 NQVSYGILINGL 166
+ + G++ N L
Sbjct: 607 DASTIGLVTNML 618
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 124 bits (311), Expect = 3e-29, Method: Composition-based stats.
Identities = 57/148 (38%), Positives = 95/148 (64%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ LF+ +++ R PSI++FN++L+ +VK K Y + ISL +ME GI D+ T NI+
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INC+C Q+S+A S+L K+LK GY+P+ +T +L+ G C ++V A+ D+++ G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + V+Y +I+ LCK + A +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Score = 94.4 bits (233), Expect = 4e-20, Method: Composition-based stats.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 35/187 (18%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R+ +DAV L ++++++ + P I+ +N I+ L KTK + A ++E +GI P++VT
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFT----------------------- 125
L+N C+ + S A +L+ ++K+ PN IT++
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 126 ------------TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+LI GLCL+D++ A Q D ++++G + VSY LING CK +
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 174 AALRLLR 180
++L R
Sbjct: 348 DGMKLFR 354
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 74/145 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + ++L++ + P + ++ + S A+SL +M G PDIV N +I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +++ AF +I ++G +PN +T+T L+ GLC + + A + +++ + I
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N ++Y L++ K G+ A L
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELF 283
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 69/137 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D + LF + Q + + +N ++ + A QM+F GI PDI T NIL+
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G++ A + + KR + +T+TT+I+G+C +V+ A L +G++
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK 467
Query: 154 LNQVSYGILINGLCKVG 170
+ V+Y +++GLC G
Sbjct: 468 PDIVTYTTMMSGLCTKG 484
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 70/139 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF +++M P I+ ++ ++ L A + M +G + D+V+ N LIN +C
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ + ++ +RG NT+T+ TLI+G V +A +F ++ GI +
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 158 SYGILINGLCKVGQTRAAL 176
+Y IL+ GLC G+ AL
Sbjct: 402 TYNILLGGLCDNGELEKAL 420
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + +++ + TP++I ++ +L VK A L +M I PDIVT + L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C ++ A + ++ +G + +++ TLI G C +V+ ++ E+ +G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
N V+Y LI G + G A
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKA 384
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 74/147 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F+ ++ ++ +N ++ K K + L +M RG++ + VT N L
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I + G + A +++ G P+ T+ L+ GLC N ++++AL +++ + +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ V+Y +I G+CK G+ A L
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 54/111 (48%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P I +N +L L A+ + M+ R + DIVT +I C G++ A+S
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
+ + +G KP+ +T+TT++ GLC + + ++ +G+ N +
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 35/182 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ LF +++ R PSI+EFNK+L+ + K K + + ISL +M+ I+ + T NIL
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 93 INCYCHLGQMSVAFSVLAKILK-----------------------------------RGY 117
INC+C Q+S+A ++L K++K GY
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+P+TITFTTLI GL L+++ A+ D ++ +G Q N V+YG+++NGLCK G T AL
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 178 LL 179
LL
Sbjct: 247 LL 248
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L N++ + ++ FN I+ L K +H A++L +ME +GI P++VT + LI+
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C G+ S A +L+ ++++ PN +TF LI + A + +D+++ + I
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 155 NQVSYGILINGLC 167
+ +Y L+NG C
Sbjct: 364 DIFTYNSLVNGFC 376
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV L +++++M + P I F ++ L S A++L +M RG P++VT ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G +A ++L K+ + + + F T+I LC V AL E+ +GI
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V+Y LI+ LC G+ A +LL
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLL 318
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F ++ P ++ +N ++ K+K L +M RG++ D VT LI
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
H G A V +++ G P+ +T++ L+ GLC N ++++AL+ D + I+L+
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 158 SYGILINGLCKVGQTRAALRLL 179
Y +I G+CK G+ L
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLF 528
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 22 SSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
S L S+ R +DA L + +++ + P+++ FN ++ VK + A L M R
Sbjct: 303 SCLCSYGRW--SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
I PDI T N L+N +C ++ A + ++ + P+ +T+ TLIKG C + +V+
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ E+ +G+ + V+Y LI GL G A ++ +
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 10 HRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI 69
+R T L H+++ ++AV L +R++Q P+++ + ++ L K +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKA--SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A++L ++ME I D+V N +I+ C + A ++ ++ +G +PN +T+++LI
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
LC + A Q +++ + I N V++ LI+ K G+ A +L
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L++ +++ P I +N ++ A + M + PD+VT N LI
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C ++ + ++ RG +T+T+TTLI+GL + A + ++++ G+
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y IL++GLC G+ AL +
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVF 493
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 65/148 (43%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F +++ P I+ ++ +L L A+ + M+ I DI +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G++ + + + +G KPN +T+ T+I GLC ++ A ++ G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y LI + G A+ L+R
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIR 599
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 35/182 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV LF +++ R PSI+EFNK+L+ + K + + ISL QM+ GI D+ T +I
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 93 INCYCHLGQMSVAFSVLAKILK-----------------------------------RGY 117
INC+C Q+S+A +VLAK++K GY
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
KP+T TFTTLI GL L+++ A+ D+++ +G Q + V+YG ++NGLCK G AL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 178 LL 179
LL
Sbjct: 245 LL 246
Score = 99.8 bits (247), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 79/133 (59%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L N++ R +++ FN I+ L K +H +A+ L +ME +GI P++VT N LIN
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C+ G+ S A +L+ +L++ PN +TF LI ++ A + H+E++ + I
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 155 NQVSYGILINGLC 167
+ ++Y +LING C
Sbjct: 362 DTITYNLLINGFC 374
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Query: 25 HSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
+ HS+ + +DAV L +++++M + P F ++ L S A++L QM RG P
Sbjct: 163 YCHSKRI-SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D+VT ++N C G + +A ++L K+ K N + F T+I LC V+ A+
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ +GI+ N V+Y LIN LC G+ A RLL
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + +L+ + P+++ FN ++ K A L +M R I PD +T N+L
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C ++ A + ++ + PN T+ TLI G C +V+ ++ E+ +G+
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
N V+Y +I G + G +A
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSA 452
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Query: 10 HRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI 69
++ TF L H+++ ++AV L ++++Q P ++ + ++ L K +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKA--SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A++L ++ME I ++V N +I+ C + VA + ++ +G +PN +T+ +LI
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
LC + A + +L + I N V++ LI+ K G+ A +L
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+ C+ NRL + + P+I +N ++ K K + L +M RG++
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
+ VT +I + G A V +++ + +T++ L+ GLC ++ AL
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
L ++LN Y +I G+CK G+ A L
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 123 bits (309), Expect = 7e-29, Method: Composition-based stats.
Identities = 58/147 (39%), Positives = 89/147 (60%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ LF ++Q R P+ I+FN++ + + +TK Y + + ME GI D+ T+ I+
Sbjct: 52 NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
INCYC ++ AFSVL + K GY+P+TITF+TL+ G CL +V A+ D ++
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + V+ LINGLC G+ AL L+
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLI 198
Score = 88.6 bits (218), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 76/142 (53%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+N ++ P I +N ++ K A + M +G PDIVT +ILIN YC
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ + +I +G PNTIT+ TL+ G C + ++ A + E++++G+ + V
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+YGIL++GLC G+ AL +
Sbjct: 457 TYGILLDGLCDNGELNKALEIF 478
Score = 83.2 bits (204), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 79/148 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ LFN + ++ ++ ++ L + + +M R I+PD+VT + L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + G++ A + +++ RG P+TIT+ +LI G C + + A Q D ++++G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + V+Y ILIN CK + +RL R
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFR 409
Score = 76.6 bits (187), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 77/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L +R+++M+ P ++ + ++ L S A+ L +M G PD VT +
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 216
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G ++A + K+ +R K + + ++ +I LC + AL +E+ +GI
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + V+Y LI GLC G+ ++LR
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 76/134 (56%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LF ++ + S+++++ ++ L K + A+SL ++ME +GI D+VT + LI
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C+ G+ +L +++ R P+ +TF+ LI ++ A + ++E++ +GI
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 155 NQVSYGILINGLCK 168
+ ++Y LI+G CK
Sbjct: 349 DTITYNSLIDGFCK 362
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F+ ++ P I+ ++ ++ K K + L ++ +G++P+ +T N L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ +C G+++ A + +++ RG P+ +T+ L+ GLC N ++ +AL+ +++ +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L Y I+I+G+C + A L
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLF 513
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 75/145 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + R ++ + P I F+ ++ S A++L +M PD+VT++ LIN
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++S A ++ ++++ G++P+ +T+ ++ LC + AL ++ + I+
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V Y I+I+ LCK G AL L
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLF 268
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 61/131 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LF ++ PS++ + +L L + A+ + +M+ + I NI+
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C+ ++ A+S+ + +G KP+ +T+ +I GLC + A ++ G
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 153 QLNQVSYGILI 163
+ +Y ILI
Sbjct: 557 TPDDFTYNILI 567
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 64/134 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ +F ++ + R T I +N I+ + A SL + +G+ PD+VT N++
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G +S A + K+ + G P+ T+ LI+ + +++ +E+ G
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Query: 153 QLNQVSYGILINGL 166
+ + ++I+ L
Sbjct: 592 SADSSTIKMVIDML 605
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 123 bits (308), Expect = 7e-29, Method: Composition-based stats.
Identities = 66/182 (36%), Positives = 99/182 (54%), Gaps = 35/182 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV LF +++ R PSIIEF+K+L+ + K + + ISL QM+ GI + T +IL
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 93 INCYCHLGQMSVAFSVLAKILK-----------------------------------RGY 117
INC+C Q+ +A +VL K++K GY
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+PNT+TF TLI GL L+++ A+ D ++A+G Q + V+YG+++NGLCK G T A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 178 LL 179
LL
Sbjct: 243 LL 244
Score = 90.9 bits (224), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 78/133 (58%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L N++ Q + P ++ +N I+ L K KH A++L +ME +GI P++VT + LI+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C+ G+ S A +L+ +++R P+ TF+ LI ++ A + +DE++ + I
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 155 NQVSYGILINGLC 167
+ V+Y LING C
Sbjct: 360 SIVTYSSLINGFC 372
Score = 87.0 bits (214), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Query: 25 HSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
+ HS+ + ++AV L +++ + P+ + FN ++ L S A++L +M +G P
Sbjct: 161 YCHSKRI-SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP 219
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D+VT +++N C G +AF++L K+ + +P + + T+I GLC + AL
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ +GI+ N V+Y LI+ LC G+ A RLL
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Score = 73.2 bits (178), Expect = 9e-14, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 75/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + +++ + P + F+ ++ VK A L +M R I P IVT + L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C ++ A + ++ + P+ +T+ TLIKG C +V+ ++ E+ +G+
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y ILI GL + G A + +
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 72/139 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F ++ P ++ +N ++ K K + + +M RG++ + VT NIL
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I G +A + +++ G PN +T+ TL+ GLC N ++++A+ + L +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 153 QLNQVSYGILINGLCKVGQ 171
+ +Y I+I G+CK G+
Sbjct: 498 EPTIYTYNIMIEGMCKAGK 516
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 69/139 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L++ +++ PSI+ ++ ++ A + M + PD+VT N LI +C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ V ++ +RG NT+T+ LI+GL A + E+++ G+ N +
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 158 SYGILINGLCKVGQTRAAL 176
+Y L++GLCK G+ A+
Sbjct: 468 TYNTLLDGLCKNGKLEKAM 486
Score = 57.4 bits (137), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 62/143 (43%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F ++ P+I+ +N +L L K A+ + ++ + P I T NI+I C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ + + + +G KP+ + + T+I G C + A E+ G N
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
Y LI + G A+ L++
Sbjct: 573 CYNTLIRARLRDGDREASAELIK 595
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 62/132 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F L + + P+I +N ++ + K L + +G+ PD+V N +I+
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G A ++ ++ + G PN+ + TLI+ + + + + E+ + G
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG 604
Query: 155 NQVSYGILINGL 166
+ + G++ N L
Sbjct: 605 DASTIGLVTNML 616
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 36/188 (19%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
HS L +DA+ LF +++ R PSI EFNK+L+ + K K + + ISL +M+ GI ++
Sbjct: 62 HSMKL-DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL 120
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILK-------------------------------- 114
T NILINC+C Q+S+A ++L K++K
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 115 ---RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
GY+P+TITFTTLI GL L+++ A+ D ++ +G Q N V+YG+++NGLCK G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 172 TRAALRLL 179
A LL
Sbjct: 241 IDLAFNLL 248
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 80/148 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ LF + P++I ++ +++ L + +S A L M R I P++VT N L
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + G++ A + +++KR P+ T+++LI G C++D++ A + ++++
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LING CK + + L R
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFR 424
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV L +++++M + P I F ++ L S A++L +M RG P++VT ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G + +AF++L K+ + N + ++T+I LC AL E+ +G+
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N ++Y LI+ LC + A RLL
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLL 318
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 75/133 (56%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L N++ + +++ ++ ++ L K +H A++L +ME +G+ P+++T + LI+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C+ + S A +L+ +++R PN +TF LI ++ A + +DE++ + I
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 155 NQVSYGILINGLC 167
+ +Y LING C
Sbjct: 364 DIFTYSSLINGFC 376
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+ C+ +RL + +H P+++ +N ++ K K + L +M RG++
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
+ VT LI+ + A V +++ G PN +T+ TL+ GLC N ++++A+
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ L ++ +Y I+I G+CK G+ L
Sbjct: 493 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + +++ + P+++ FN ++ VK A L +M R I PDI T + L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C ++ A + ++ + PN +T+ TLI G C ++ ++ E+ +G+
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 153 QLNQVSYGILINGL 166
N V+Y LI+G
Sbjct: 432 VGNTVTYTTLIHGF 445
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 68/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++ V LF + Q + + + ++ + + A + QM G+ P+I+T N L
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A V + + +P T+ +I+G+C +V+ L +G+
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + + Y +I+G C+ G A L R
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEADALFR 564
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 93/147 (63%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D++ LF ++Q R PSI +F+++L+ + K K Y + I L QM+ GI ++ T NIL
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+NC+C Q+S+A S L K++K G++P+ +TF +L+ G C D+V AL D+++ G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V Y +I+GLCK Q AL LL
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLL 209
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 80/134 (59%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ +F++++ M + P+++ +N I+ L K+K A+ L ++ME GI PD+VT N LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G+ S A +++ + KR P+ TF LI +V A +F++E++ + +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 154 LNQVSYGILINGLC 167
+ V+Y +LI GLC
Sbjct: 289 PDIVTYSLLIYGLC 302
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 35 AVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
+C+++RL + P ++ ++ ++ K+K + L +M RG++
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
+ VT ILI YC G+++VA + +++ G PN IT+ L+ GLC N ++++AL
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ G+ + V+Y I+I G+CK G+ A
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L NR+ + P ++ +N +++ L + +S A + M R I PD+ T N L
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G++S A ++++R P+ +T++ LI GLC+ ++ A + ++++G
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y ILING CK + ++L
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLF 349
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 22 SSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
S L S R +DA + + + + P + FN ++ VK S A +M R
Sbjct: 229 SGLCSSGRW--SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
+ PDIVT ++LI C ++ A + ++ +G P+ +T++ LI G C + +V+ +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ E+ +G+ N V+Y ILI G C+ G+ A + R
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A + +++ P I+ ++ ++ L A + M +G PD+VT +IL
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN YC ++ + ++ +RG NT+T+T LI+G C ++ A + ++ G+
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N ++Y +L++GLC G+ AL +L
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVIL 419
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + Q + + + ++ + ++A + +M F G+ P+I+T N+L++ C
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A +LA + K G + +T+ +I+G+C +V A + L QG+ +
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y ++ GL K G R A L R
Sbjct: 468 TYTTMMLGLYKKGLRREADALFR 490
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +F R++ P+II +N +L L A+ + M+ G+ DIVT NI+
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G+++ A+ + + +G P+ T+TT++ GL + A ++ GI
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Query: 153 QLNQ 156
N+
Sbjct: 498 LPNE 501
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 119 bits (299), Expect = 8e-28, Method: Composition-based stats.
Identities = 65/183 (35%), Positives = 98/183 (53%), Gaps = 35/183 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV LF ++Q R PSI+EFNK+L+ + K + + ISL +M+ I D+ + NIL
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 93 INCYCHLGQMSVAFSVLAKILKRG-----------------------------------Y 117
INC+C Q+ +A +VL K++K G Y
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+PNT+TF TLI GL L+++ A+ D ++A+G Q + +YG ++NGLCK G AL
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 178 LLR 180
LL+
Sbjct: 242 LLK 244
Score = 85.1 bits (209), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 78/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L +++ M + P+ + FN ++ L S A++L +M RG PD+ T +
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G + +A S+L K+ K + + + +TT+I LC V AL E+ +GI
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V+Y LI LC G+ A RLL
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLL 313
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 75/133 (56%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L ++ + + ++ + I+ L K+ + A++L +M+ +GI P++VT N LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C+ G+ S A +L+ +++R PN +TF+ LI ++ A + +DE++ + I
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 155 NQVSYGILINGLC 167
+ +Y LING C
Sbjct: 359 DIFTYSSLINGFC 371
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 77/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ LF + P+++ +N ++ L +S A L M R I P++VT + L
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + G++ A + +++KR P+ T+++LI G C++D++ A + ++++
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LI G CK + + L R
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Score = 76.6 bits (187), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 77/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + +++ + P+++ F+ ++ VK A L +M R I PDI T + L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C ++ A + ++ + PN +T+ TLIKG C +V+ ++ E+ +G+
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LI GL + G A ++ +
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+ C+ +RL + +H P+++ +N ++ K K + L +M RG++
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
+ VT N LI G +A + K++ G P+ IT++ L+ GLC ++++AL
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ L ++ + +Y I+I G+CK G+
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 69/143 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + Q + + +N ++ L + +A + +M G+ PDI+T +IL++ C
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A V + K +P+ T+ +I+G+C +V+ L +G++ N +
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
Y +I+G C+ G A L R
Sbjct: 537 IYTTMISGFCRKGLKEEADALFR 559
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 75/146 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L +R++ P + + ++ L K +A+SL +ME I D+V +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C+ ++ A ++ ++ +G +PN +T+ +LI+ LC + A + +++ + I
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
N V++ LI+ K G+ A +L
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKL 347
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 65/143 (45%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +++ P II ++ +L L K A+ + ++ + PDI T NI+I C
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ + + + +G KPN I +TT+I G C + A E+ G N
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y LI + G A+ L++
Sbjct: 572 TYNTLIRARLRDGDKAASAELIK 594
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 116 bits (291), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 35/182 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ LF + Q R PSIIEF+K+L+ + K + + IS +ME GI ++ T NIL
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 93 INC-----------------------------------YCHLGQMSVAFSVLAKILKRGY 117
INC +CH ++S A +++ ++++ GY
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
KP+T+TFTTLI GL L+++ A+ D ++ +G Q + V+YG ++NGLCK G T AL
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 178 LL 179
LL
Sbjct: 240 LL 241
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L N++ + +++ ++ ++ L K +H A++L +ME +G+ P+++T + LI+
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C+ G+ S A +L+ +++R PN +TF+ LI ++ +A + ++E++ + I
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 155 NQVSYGILINGLC---KVGQTRAALRLL 179
N +Y LING C ++G+ + L L+
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELM 384
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV L +++++M + P + F ++ L S A++L +M RG PD+VT +
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G +A ++L K+ + N + ++T+I LC AL E+ +G+
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N ++Y LI+ LC G+ A RLL
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLL 311
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
+DA+ LF + P++I ++ +++ L +S A L M R I P++VT +
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ + G++ A + +++KR PN T+++LI G C+ D++ A Q + ++ +
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LING CK + + L R
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 73/134 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + +++ + P+++ F+ ++ VK A L +M R I P+I T + L
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C L ++ A +L ++++ PN +T+ TLI G C +V + ++ E+ +G+
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424
Query: 153 QLNQVSYGILINGL 166
N V+Y LI+G
Sbjct: 425 VGNTVTYTTLIHGF 438
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 76/147 (51%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
++AV L +R++Q P ++ + ++ L K +A++L ++ME I ++V +
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ C A ++ ++ +G +PN IT+++LI LC + A + +++ +
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
I N V++ LI+ K G+ A +L
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKL 345
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 69/139 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ +++ P+I ++ ++ A + M + +P++VT N LIN +C
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ + ++ +RG NT+T+TTLI G A ++++ G+ N +
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 158 SYGILINGLCKVGQTRAAL 176
+Y IL++GLCK G+ A+
Sbjct: 465 TYNILLDGLCKNGKLAKAM 483
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+ C+ +RL + + P+++ +N ++ K K + L +M RG++
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
+ VT LI+ + A V +++ G PN +T+ L+ GLC N ++ +A+
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ L ++ + +Y I+I G+CK G+ +
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 26 SHSRSLPN--DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
S RS N + + LF +++Q R PSI++F+K+L+ + K+K+Y + ISL H ME GI
Sbjct: 42 STKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIG 101
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
D+ + NI+INC C + +A SV+ K++K GY+P+ +T ++LI G C ++V A+
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++ G + + V Y +I+G CK+G A+ L
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 79/151 (52%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L NDAV LF+R+ + + +N ++ L + +S A L M R I+P+++T
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+I+ + G+ S A + ++ +R P+ T+ +LI GLC++ +V A Q D ++
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+G + V+Y LING CK + +L R
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N ++ K+K L +M RG++ D +T N +I Y G+ A +
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++ R PN T++ L+ GLC+N +V++AL + + I+L+ +Y I+I+G+CK
Sbjct: 372 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 169 VGQTRAALRLLR 180
+G A L R
Sbjct: 429 IGNVEDAWDLFR 440
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L ++ P++I F ++ VK +S A+ L +M R + PD+ T N L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G++ A +L ++ +G P+ +T+ TLI G C + +V + E+ +G+
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ ++Y +I G + G+ AA
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAA 368
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ L +++ +M P ++ +N I+ K + A+ L +ME G+ D VT N L+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G+ S A ++ ++ R PN ITFT +I + A++ ++E+ + +
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y LINGLC G+ A ++L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQML 302
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 75/144 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + ++++ + P ++ + ++ + AI L +ME G PD+V N +I+
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C +G ++ A + ++ + G + + +T+ +L+ GLC + + A + +++ + I
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N +++ +I+ K G+ A++L
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKL 266
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P+ A +F+R M P+I ++ +L L A+ L M+ I DI T NI
Sbjct: 365 PDAAQEIFSR---MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ C +G + A+ + + +G KP+ +++TT+I G C Q ++ + ++ G
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 152 I 152
+
Sbjct: 482 L 482
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 35/183 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV LF +++ R PSI+EF+K+L+ + K + + ISL QM+ GI ++ T +IL
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 93 INCYCHLGQMSVAFSVLAKILK-----------------------------------RGY 117
INC+C Q+S+A +VLAK++K GY
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+P++ TF TLI GL +++ A+ D ++ +G Q + V+YGI++NGLCK G AL
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 178 LLR 180
LL+
Sbjct: 243 LLK 245
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV L ++++M + P FN ++ L + S A++L +M +G PD+VT I+
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G + +A S+L K+ + +P + + T+I LC V AL E+ +GI
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V+Y LI LC G+ A RLL
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLL 314
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L ++ Q + P ++ +N I+ L K+ + A++L +M+ +GI P++VT N LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C+ G+ S A +L+ +++R PN +TF+ LI ++ A + +DE++ + I
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 155 NQVSYGILINGLC 167
+ +Y LING C
Sbjct: 360 DIFTYSSLINGFC 372
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + +++ + P+++ F+ ++ VK A L +M R I PDI T + L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C ++ A + ++ + PN +T+ TLIKG C +V ++ E+ +G+
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 153 QLNQVSYGILINGL 166
N V+Y LI+G
Sbjct: 428 VGNTVTYTTLIHGF 441
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 23 SLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
L H+R+ ++AV L +R++ P ++ + ++ L K +A+SL +ME I
Sbjct: 195 GLFRHNRA--SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
P +V N +I+ C+ ++ A ++ ++ +G +PN +T+ +LI+ LC + A +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+++ + I N V++ LI+ K G+ A +L
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+ C+ +RL + +H P+++ +N ++ K K + L +M RG++
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
+ VT LI+ + + A V +++ G P+ +T++ L+ GLC N +V+ AL
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ L ++ + +Y I+I G+CK G+ L
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 73/148 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++ + LF + Q + + + ++ + + A + QM G++PDI+T +IL
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C+ G++ A V + + +P+ T+ +I+G+C +V+ L +G+
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N V+Y +++G C+ G A L R
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFR 560
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 69/148 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F +++ P I+ ++ +L L A+ + ++ + PDI T NI+
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G++ + + + +G KPN +T+TT++ G C + A E+ +G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y LI + G A+ L+R
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIR 595
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 69/143 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L++ +++ P I ++ ++ A + M + P++VT N LI
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C ++ + ++ +RG NT+T+TTLI G + A ++++ G+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 154 LNQVSYGILINGLCKVGQTRAAL 176
+ ++Y IL++GLC G+ AL
Sbjct: 464 PDIMTYSILLDGLCNNGKVETAL 486
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 92/147 (62%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ LF +++ R PSII+F K+L + K K + + I+L ++ G+ D+ T N+L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+NC+C Q +A S L K++K G++P+ +TFT+LI G CL ++++ A+ ++++ GI
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + V Y +I+ LCK G AL L
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLF 200
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ + N++++M P ++ + I+ L K H + A+SL QME GI PD+V L+
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C+ G+ A S+L + KR KP+ ITF LI + A + ++E++ I
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N +Y LING C G A ++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMF 305
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L+N +++M P+I + ++ A + + ME +G PD+V LI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N +C ++ A + ++ ++G NTIT+TTLI+G + A + ++++G+
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y +L++ LC G+ + AL +
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFE 411
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L + + + P +I FN ++ VK + A L ++M I P+I T LI
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N +C G + A + + +G P+ + +T+LI G C +V A++ E+ +G+
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 154 LNQVSYGILINGLCKVGQTRAA 175
N ++Y LI G +VG+ A
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVA 371
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ +F + Q T + I + ++ + ++A + M RG+ P+I T N+L
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 93 INCYCHLGQMSVAFSVLAKILKR---GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
++C C+ G++ A + + KR G PN T+ L+ GLC N ++++AL +++
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + + ++Y I+I G+CK G+ + A+ L
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ + ++ K K A+ + ++M +G+ + +T LI + +G+ +VA V
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ---GIQLNQVSYGILING 165
+ ++ RG PN T+ L+ LC N +VK+AL +++ + G+ N +Y +L++G
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 166 LCKVGQTRAALRLLR 180
LC G+ AL +
Sbjct: 435 LCYNGKLEKALMVFE 449
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
S P A +++++ P I+ F ++ A+S+ +QM GI PD+V
Sbjct: 121 SQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMY 180
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+I+ C G ++ A S+ ++ G +P+ + +T+L+ GLC + + + A +
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRL 178
+ I+ + +++ LI+ K G+ A L
Sbjct: 241 RKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM---EFRGIMPDIVT 88
PN A +F+ ++ P+I +N +L L A+ + M E G+ P+I T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N+L++ C+ G++ A V + KR IT+T +I+G+C +VK A+ L
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++G++ N V+Y +I+GL + G A L R
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 114 bits (285), Expect = 4e-26, Method: Composition-based stats.
Identities = 60/182 (32%), Positives = 98/182 (53%), Gaps = 35/182 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LF +++ R PSI+EF+K+L+ + K K + + IS +ME G+ ++ T NI+
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 93 INCYCHLGQMSVAFSVLAKILK-----------------------------------RGY 117
INC C Q+S A ++L K++K GY
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+P+T+TFTTL+ GL +++ A+ + ++ +G Q + V+YG +INGLCK G+ AL
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 178 LL 179
LL
Sbjct: 227 LL 228
Score = 89.0 bits (219), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 80/139 (57%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R P+ A+ L N++ + + ++ ++ ++ L K +H A++L +M+ +GI PD+ T
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+ LI+C C+ G+ S A +L+ +L+R PN +TF +LI ++ A + DE++
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 149 AQGIQLNQVSYGILINGLC 167
+ I N V+Y LING C
Sbjct: 338 QRSIDPNIVTYNSLINGFC 356
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L +++++M + P + F ++ L + S A++L +M +G PD+VT +
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G+ +A ++L K+ K + + + ++T+I LC V AL E+ +GI
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + +Y LI+ LC G+ A RLL
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLL 298
Score = 73.9 bits (180), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ ++Q P+I+ +N ++ A + M + +PD+VT N LIN +C
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ + + +RG NT+T+TTLI G A ++++ G+ N +
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 158 SYGILINGLCKVGQTRAAL 176
+Y L++GLCK G+ A+
Sbjct: 452 TYNTLLDGLCKNGKLEKAM 470
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 69/134 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L + +L+ + P+++ FN ++ K A L +M R I P+IVT N L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C ++ A + ++ + P+ +T+ TLI G C +V ++ ++ +G+
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 153 QLNQVSYGILINGL 166
N V+Y LI+G
Sbjct: 412 VGNTVTYTTLIHGF 425
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 69/139 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F ++ P ++ +N ++ K K + L M RG++ + VT L
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + A V +++ G PN +T+ TL+ GLC N ++++A+ + L +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 153 QLNQVSYGILINGLCKVGQ 171
+ + +Y I+ G+CK G+
Sbjct: 482 EPDIYTYNIMSEGMCKAGK 500
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 67/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F +++ P+I+ +N +L L K A+ + ++ + PDI T NI+
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
C G++ + + + +G KP+ I + T+I G C + A ++ G
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y LI + G A+ L++
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIK 579
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 113 bits (282), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 35/173 (20%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+++ R PSI EFNK+L+ + K K + + ISL +M+ GI ++ T NILINC+C Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 102 MSVAFSVLAKILK-----------------------------------RGYKPNTITFTT 126
+S+A ++L K++K GY+P+TITFTT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 127 LIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
LI GL L+++ A+ D ++ +G Q N V+YG+++NGLCK G A LL
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 173
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 73/133 (54%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L N++ + ++ FN I+ L K +H A++L +ME +GI P++VT + LI+
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C C G+ S A +L+ ++++ PN +TF LI + A + HD+++ + I
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 155 NQVSYGILINGLC 167
+ +Y LING C
Sbjct: 289 DIFTYNSLINGFC 301
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV L +++++M + P I F ++ L S A++L +M RG P++VT ++
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G + +AF++L K+ + + + F T+I LC V AL E+ +GI
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V+Y LI+ LC G+ A +LL
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLL 243
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F ++ P + +N ++ K+K L +M RG++ D VT LI
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
H G A V +++ G P+ +T++ L+ GLC N ++++AL+ D + I+L+
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 158 SYGILINGLCKVGQTRAALRLL 179
Y +I G+CK G+ L
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLF 453
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 22 SSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
S L S+ R +DA L + +++ + P+++ FN ++ VK + A L M R
Sbjct: 228 SCLCSYGRW--SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
I PDI T N LIN +C ++ A + ++ + P+ T+ TLIKG C + +V+
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ E+ +G+ + V+Y LI GL G A ++ +
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 76/146 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L +++++ + PSI+ + +L K S A++L QM G PD +T LI+
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ S A +++ ++++RG +PN +T+ ++ GLC + A +++ A I+
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ V + +I+ LCK AL L +
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFK 209
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 10 HRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI 69
+R T L H+++ ++AV L +R++Q P+++ + ++ L K +
Sbjct: 111 YRPDTITFTTLIHGLFLHNKA--SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 168
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A +L ++ME I D+V N +I+ C + A ++ ++ +G +PN +T+++LI
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
LC + A Q +++ + I N V++ LI+ K G+ A +L
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
D LF + + + ++ L A + QM G+ PDI+T +IL
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C+ G++ A V + K K + +TT+I+G+C +V L +G+
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N V+Y +I+GLC + A LL+
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLK 489
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 65/148 (43%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F +++ P I+ ++ +L L A+ + M+ I DI +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G++ + + + +G KPN +T+ T+I GLC ++ A ++ G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y LI + G A+ L+R
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIR 524
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 85/147 (57%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA LF ++ + PSI++F ++LT + Y I S +ME GI D+ + IL
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+C+C ++S A SVL K++K GY+P+ +TF +L+ G CL +++ A ++ G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V Y LI+GLCK G+ AL LL
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELL 199
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA L +++ + P+++ +N ++ L K +IA+ L ++ME +G+ D+VT N L
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C+ G+ S A +L ++KR P+ +TFT LI + A + + E++ +
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 153 QLNQVSYGILINGLCKVGQ 171
N V+Y +INGLC G+
Sbjct: 278 DPNNVTYNSIINGLCMHGR 296
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMRHT----------PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+ +C+ RL + T P+++ +N +++ K + + L +M G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
DI T N LI+ YC +G++ VA + ++ R P+ IT L+ GLC+N +++ AL
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
D++ + V+Y I+I+GLCK + A L
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ L N + + ++ +N +LT L + +S A + M R I PD+VT L
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + G + A + ++++ PN +T+ ++I GLC++ ++ A + D + ++G
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y LI+G CK ++L +
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA + +++ P ++ F ++ VK + A L +M + P+ VT N +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G++ A + +G PN +T+ TLI G C V ++ + +G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y LI+G C+VG+ R AL +
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIF 374
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 110 bits (276), Expect = 3e-25, Method: Composition-based stats.
Identities = 60/182 (32%), Positives = 100/182 (54%), Gaps = 35/182 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM--------- 83
+DA+ LF +++ R PSI+EF+K+L+ + K + + ISL QM+ GI
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 84 --------------------------PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGY 117
P IVTLN L+N +CH ++S A +++ ++++ GY
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
+P+T+TFTTL+ GL +++ A+ + ++ +G Q + V+YG +INGLCK G+ AL
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 178 LL 179
LL
Sbjct: 237 LL 238
Score = 83.6 bits (205), Expect = 7e-17, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R P+ A+ L N++ + + ++ +N I+ L K KH A L ++ME +GI PD+ T
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N LI+C C+ G+ S A +L+ +L++ P+ + F LI ++ A + +DE++
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 149 -AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ + V+Y LI G CK + + + R
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Score = 79.7 bits (195), Expect = 9e-16, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L +++++M + P + F ++ L + S A++L +M +G PD+VT +
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G+ +A ++L K+ K + + + + T+I GLC + A +++ +GI
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + +Y LI+ LC G+ A RLL
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLL 308
Score = 70.9 bits (172), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNI 91
+DA L + +L+ P ++ FN ++ VK A L +M + + PD+V N
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI +C ++ V ++ +RG NT+T+TTLI G A ++++ G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 152 IQLNQVSYGILINGLCKVGQTRAAL 176
+ + ++Y IL++GLC G AL
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETAL 446
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 38 LFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
L++ +++ +H P ++ +N ++ K K + + +M RG++ + VT LI+ +
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
A V +++ G P+ +T+ L+ GLC N V+ AL + + + ++L+
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 157 VSYGILINGLCKVGQ 171
V+Y +I LCK G+
Sbjct: 462 VTYTTMIEALCKAGK 476
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 55/100 (55%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
QM G+ PDI+T NIL++ C+ G + A V + KR K + +T+TT+I+ LC
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+V+ L +G++ N V+Y +++G C+ G A
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Query: 24 LHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
L H+++ ++AV L R++ P ++ + ++ L K +A++L ++ME I
Sbjct: 190 LFQHNKA--SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
D+V N +I+ C M AF + K+ +G KP+ T+ LI LC + A +
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
++L + I + V + LI+ K G+ A +L
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F +++ P I+ +N +L L + A+ + M+ R + DIVT +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G++ + + + +G KPN +T+TT++ G C + A E+ G
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y LI + G A+ L++
Sbjct: 528 LPNSGTYNTLIRARLRDGDEAASAELIK 555
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 35/183 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI---------- 82
NDA+ LF R++ R PSII+F ++L+ + K Y + ISL QM+ GI
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 83 -------------------------MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGY 117
PD+VT L+N YCH ++ A ++ +IL G+
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
KPN +T+TTLI+ LC N + A++ +++ G + N V+Y L+ GLC++G+ A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 178 LLR 180
LLR
Sbjct: 245 LLR 247
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 77/138 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA+ LF+++L M P+++ + ++ L K +H + A+ L +QM G P++VT N L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C +G+ A +L ++KR +PN ITFT LI ++ A + ++ ++ +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 153 QLNQVSYGILINGLCKVG 170
+ +YG LINGLC G
Sbjct: 290 YPDVFTYGSLINGLCMYG 307
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNK------ILTPLV----KTKHYSIAISLSHQMEFRGIM 83
+ +C++ L + R ++E N I T L+ K+K + + ++M +G++
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
+ +T +LI YC +G+ VA V ++ R P+ T+ L+ GLC N +V++AL
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + + + +N V+Y I+I G+CK+G+ A L
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA L +++ R P++I F ++ VK A L + M + PD+ T L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G + A + + + G PN + +TTLI G C + +V+ ++ E+ +G+
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
N ++Y +LI G C VG+ A
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVA 382
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P+ A +FN++ R P I +N +L L A+ + M R + +IVT I
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I C LG++ AF + + +G KPN IT+TT+I G C + A ++ G
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Query: 152 IQLNQVSY 159
N+ Y
Sbjct: 499 FLPNESVY 506
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
D + +F + Q + I + ++ +A + +QM R PDI T N+L
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G++ A + + KR N +T+T +I+G+C +V+ A L ++G+
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N ++Y +I+G C+ G A L +
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFK 492
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 87/148 (58%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ LF + + PSI++F+++L + K Y ISL +E GI D+ + L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+C+C ++S+A S L K++K G++P+ +TF +L+ G C ++ A+ D+++ G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N V Y +I+ LC+ GQ AL +L+
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLK 208
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ + + +M P ++ +N ++T L + + ++ + M GI PD++T + L
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ Y GQ+ A ++++R PN +T+ +LI GLC++ + A + + L+++G
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LING CK + +++L
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 81/146 (55%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ L ++++ + + P+++ +N I+ L + + A+ + M+ GI PD+VT N LI
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
H G V+ +L+ +++ G P+ ITF+ LI Q+ A + ++E++ + +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LINGLC G A ++L
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVL 312
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L ++A + N L+ P+ + +N ++ K K + + M G+ D T
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N L YC G+ S A VL +++ G P+ TF L+ GLC + ++ +AL ++L
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y I+I GLCK + A L
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAWYLF 452
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ + +++M +P +I F+ ++ K A ++M R + P+IVT N LIN C
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A VL ++ +G+ PN +T+ TLI G C +V ++ + G+ +
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y L G C+ G+ AA ++L
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVL 382
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
+N ++Q P+I+ +N ++ L A + + + +G P+ VT N LIN YC
Sbjct: 277 YNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
++ +L + + G +T T+ TL +G C + A + +++ G+ + +
Sbjct: 337 AKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYT 396
Query: 159 YGILINGLCKVGQTRAAL 176
+ IL++GLC G+ AL
Sbjct: 397 FNILLDGLCDHGKIGKAL 414
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 69/137 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +++++ PSI+ F ++ + A+SL Q+ G P++V N +I+
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID 192
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C GQ++ A VL + K G +P+ +T+ +LI L + + + +++ GI
Sbjct: 193 SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISP 252
Query: 155 NQVSYGILINGLCKVGQ 171
+ +++ LI+ K GQ
Sbjct: 253 DVITFSALIDVYGKEGQ 269
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N + + +S A + +M G+ PD+ T NIL++ C G++ A L +
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
K IT+ +IKGLC D+V+ A L +G+ + ++Y ++ GL + R
Sbjct: 422 KSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWR 481
Query: 174 AALRLLR 180
A L R
Sbjct: 482 EAHELYR 488
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 101 bits (251), Expect = 3e-22, Method: Composition-based stats.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 50/204 (24%)
Query: 26 SHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
SH +DA+ F+ +++ R + ++ NK++ V+ +AISL +ME R I +
Sbjct: 81 SHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH- 144
I + NILI C+C ++S + S K+ K G++P+ +TF TL+ GLCL D++ AL
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 145 -------------------------------------------------DELLAQGIQLN 155
++++ +G+ ++
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 156 QVSYGILINGLCKVGQTRAALRLL 179
V+YG ++NG+CK+G T++AL LL
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLL 284
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 80/147 (54%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV LF++++++ TP +I FN ++ L A +L ++M +G+ D+VT ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C +G A ++L+K+ + KP+ + ++ +I LC + A E+L +GI
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y +I+G C G+ A RLLR
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 37 CLFNRLLQMRH------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
C NR +H +P ++ FN I+ + K + L ++ RG++ + T N
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
LI+ +C + ++ A + +++ G P+TIT L+ G C N++++ AL+ + +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
I L+ V+Y I+I+G+CK + A L
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Score = 70.5 bits (171), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 72/134 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L +++ + P ++ ++ I+ L K H+S A L +M +GI P++ T N +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G+ S A +L +++R P+ +TF LI ++ A + DE+L + I
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 155 NQVSYGILINGLCK 168
+ V+Y +I G CK
Sbjct: 400 DTVTYNSMIYGFCK 413
Score = 67.0 bits (162), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ K + A H + PD+VT N +I+ YC ++ +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDA---KHMFDLMA-SPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +I +RG NT T+ TLI G C D + A E+++ G+ + ++ IL+ G C+
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 169 VGQTRAALRLL 179
+ AL L
Sbjct: 515 NEKLEEALELF 525
Score = 66.6 bits (161), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L +++ P ++ FN +++ VK A L +M R I PD VT N +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 93 INCYCHLGQMSVA---FSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
I +C + A F ++A P+ +TF T+I C +V +Q E+
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMAS-------PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+G+ N +Y LI+G C+V AA L +
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA LF+ +L+ P++ +N ++ +S A L M R I PD++T N L
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G++ A + ++L R P+T+T+ ++I G C +++ A D + + +
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV 432
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
V++ +I+ C+ + ++LLR
Sbjct: 433 ----VTFNTIIDVYCRAKRVDEGMQLLR 456
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 53/114 (46%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N ++ + + + A L +M G+ PD +T NIL+ +C ++ A + I
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+T+ + +I G+C +V A L G++ + +Y ++I+G C
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 67/147 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF + + + +N I+ + K A L + G+ PD+ T N++I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C +S A + K+ G++P+ T+ TLI+G ++ ++++ E+ + G
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ + + +C+V LR
Sbjct: 640 GDAFTIKMAEEIICRVSDEEIIENYLR 666
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 62/147 (42%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LF ++ P I N +L + + A+ L ++ I D V NI+
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C ++ A+ + + G +P+ T+ +I G C + A ++ G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + +Y LI G K G+ ++ L+
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELI 630
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 100 bits (249), Expect = 5e-22, Method: Composition-based stats.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 50/204 (24%)
Query: 26 SHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
SH +DA+ F+ +++ R + ++ NK++ V+ +AISL +ME R I +
Sbjct: 81 SHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH- 144
I + NILI C+C ++S + S K+ K G++P+ +TF TL+ GLCL D++ AL
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 145 -------------------------------------------------DELLAQGIQLN 155
++++ +G+ ++
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 156 QVSYGILINGLCKVGQTRAALRLL 179
V+YG ++NG+CK+G T++AL LL
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLL 284
Score = 84.0 bits (206), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 80/147 (54%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV LF++++++ TP +I FN ++ L A +L ++M +G+ D+VT ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C +G A ++L+K+ + KP+ + ++ +I LC + A E+L +GI
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y +I+G C G+ A RLLR
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 37 CLFNRLLQMRH------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
C NR +H +P ++ FN I+ + K + L ++ RG++ + T N
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
LI+ +C + ++ A + +++ G P+TIT L+ G C N++++ AL+ + +
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
I L+ V+Y I+I+G+CK + A L
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 72/134 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L +++ + P ++ ++ I+ L K H+S A L +M +GI P++ T N +I+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G+ S A +L +++R P+ +TF LI ++ A + DE+L + I
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 155 NQVSYGILINGLCK 168
+ V+Y +I G CK
Sbjct: 400 DTVTYNSMIYGFCK 413
Score = 66.6 bits (161), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ K + A H + PD+VT N +I+ YC ++ +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDA---KHMFDLMA-SPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +I +RG NT T+ TLI G C D + A E+++ G+ + ++ IL+ G C+
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 169 VGQTRAALRLL 179
+ AL L
Sbjct: 515 NEKLEEALELF 525
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L +++ P ++ FN +++ VK A L +M R I PD VT N +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 93 INCYCHLGQMSVA---FSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
I +C + A F ++A P+ +TF T+I C +V +Q E+
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMAS-------PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+G+ N +Y LI+G C+V AA L +
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Score = 60.5 bits (145), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA LF+ +L+ P++ +N ++ +S A L M R I PD++T N L
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G++ A + ++L R P+T+T+ ++I G C +++ A D + + +
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV 432
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
V++ +I+ C+ + ++LLR
Sbjct: 433 ----VTFNTIIDVYCRAKRVDEGMQLLR 456
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 53/114 (46%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N ++ + + + A L +M G+ PD +T NIL+ +C ++ A + I
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+T+ + +I G+C +V A L G++ + +Y ++I+G C
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 62/147 (42%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LF ++ P I N +L + + A+ L ++ I D V NI+
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C ++ A+ + + G +P+ T+ +I G C + A ++ G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + +Y LI G K G+ ++ L+
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELI 630
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 58/118 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF + + + +N I+ + K A L + G+ PD+ T N++I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+ +C +S A + K+ G++P+ T+ TLI+G ++ ++++ E+ + G
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 11/179 (6%)
Query: 12 NPTFLLAMPFS--SLHSHSRS-LPN--------DAVCLFNRLLQMRHTPSIIEFNKILTP 60
NP L+ FS S H H R L N DA LF +LQ R PSI++F ++LT
Sbjct: 29 NPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTV 88
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
+ K + I I L H+ME GI D+ + ILI+C+C ++S+A ++L K++K G++P+
Sbjct: 89 IAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPS 148
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+T +L+ G C ++ + A+ D + G N V Y +INGLCK AL +
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 83/147 (56%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA +F+ ++ P ++ +N ++T K+K + L +M ++G++ D T N LI
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC G+++VA V +++ G P+ +T+ L+ LC N ++++AL ++L +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
++ ++Y I+I GLC+ + + A L R
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFR 453
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 78/146 (53%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L +++ + P++I F ++ VK + A +L +M R ++P++ T N LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N +C G + A + ++ +G P+ +T+ TLI G C + +V+ ++ E+ QG+
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ +Y LI+G C+ G+ A ++
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVF 382
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV L + + P+++ +N ++ L K + + A+ + + ME +GI D VT N LI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + G+ + A +L ++KR PN I FT LI + A + E++ + +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 154 LNQVSYGILINGLC 167
N +Y LING C
Sbjct: 287 PNVFTYNSLINGFC 300
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 73/147 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ +F + + + +N +++ L + ++ A L M R I P+++ L
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + G + A ++ ++++R PN T+ +LI G C++ + A D ++++G
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y LI G CK + ++L
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLF 347
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 68/140 (48%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+++++ PSI+ +L + + A+SL M+ G +P++V N +IN C
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ A V + K+G + + +T+ TLI GL + + A + +++ + I N + +
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 161 ILINGLCKVGQTRAALRLLR 180
LI+ K G A L +
Sbjct: 259 ALIDTFVKEGNLLEARNLYK 278
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A +FNR++ +P I+ +N +L L A+ + ++ + DI+T NI+
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
I C ++ A+ + + ++G KP+ I + T+I GLC
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 83/147 (56%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA+ + + + +P ++ ++ +L+ ++ A+ + +M +GI PD +T + L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +C + A + ++L+ G P+ T+T LI C+ +++ALQ H+E++ +G+
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y +LINGL K +TR A RLL
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 78/139 (56%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +L+ + +P++ +N ++ + +A++L +ME +G +P++VT N LI+ YC
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
L ++ F +L + +G +PN I++ +I GLC ++K E+ +G L++V
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 158 SYGILINGLCKVGQTRAAL 176
+Y LI G CK G AL
Sbjct: 312 TYNTLIKGYCKEGNFHQAL 330
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LF+++ P+++ +N ++ K + L M +G+ P++++ N++IN
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G+M VL ++ +RGY + +T+ TLIKG C +AL H E+L G+
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y LI+ +CK G A+ L
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFL 368
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 81/146 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A + + +PS++ +N ++ T AI++ M+ +G+ PD+V+ + +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C + A V +++++G KP+TIT+++LI+G C + K A ++E+L G+
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
++ +Y LIN C G AL+L
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQL 542
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 72/126 (57%), Gaps = 1/126 (0%)
Query: 49 PSIIEFNKILTPLVKTK-HYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P ++ +N +L +++K + S A ++ +M + P++ T NILI +C G + VA +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ K+ +G PN +T+ TLI G C ++ + + +G++ N +SY ++INGLC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 168 KVGQTR 173
+ G+ +
Sbjct: 287 REGRMK 292
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Query: 45 MRH--TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQM 102
+RH TPS+I + ++ + K + + A+ QM RG+ P+ T L++ + G M
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 103 SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
+ A+ VL ++ G+ P+ +T+ LI G C+ +++ A+ +++ +G+ + VSY +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 163 INGLCKVGQTRAALRLLR 180
++G C+ ALR+ R
Sbjct: 457 LSGFCRSYDVDEALRVKR 474
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++I +N ++ L + + +M RG D VT N LI YC G A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
A++L+ G P+ IT+T+LI +C + RA++F D++ +G+ N+ +Y L++G +
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 169 VGQTRAALRLLR 180
G A R+LR
Sbjct: 393 KGYMNEAYRVLR 404
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ K ++ A+ + +M G+ P ++T LI+ C G M+ A L +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ RG PN T+TTL+ G + A + E+ G + V+Y LING C G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 172 TRAALRLLR 180
A+ +L
Sbjct: 431 MEDAIAVLE 439
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQ-MSVAFSVLAKILKRGYKPNTITFTTLI 128
A+S+ H + G MP +++ N +++ + +S A +V ++L+ PN T+ LI
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILI 212
Query: 129 KGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+G C + AL D++ +G N V+Y LI+G CK+ + +LLR
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR 264
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L+ +L++ P + ++ A+ L ++M +G++PD+VT ++LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI---------------KGLCLNDQVK 138
N + A +L K+ P+ +T+ TLI KG C+ +
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 139 RALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
A Q + +L + + + +Y I+I+G C+ G R A L +
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI- 93
A+ L N +++ P ++ ++ ++ L K A L ++ + +P VT + LI
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 94 NC--------------YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
NC +C G M+ A V +L + +KP+ + +I G C +++
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
A + E++ G L+ V+ L+ L K G+
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.0 bits (227), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 71/132 (53%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP ++ + I++ + A L H+M +G+ PD VT LIN YC G M AF
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
V +++ G PN +T+TTLI GLC + A + E+ G+Q N +Y ++NGLC
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 168 KVGQTRAALRLL 179
K G A++L+
Sbjct: 503 KSGNIEEAVKLV 514
Score = 83.6 bits (205), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 73/141 (51%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
F+ +++ P + + ++ K A ++M R I PD++T +I+ +C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
+G M A + ++ +G +P+++TFT LI G C +K A + H+ ++ G N V+
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 159 YGILINGLCKVGQTRAALRLL 179
Y LI+GLCK G +A LL
Sbjct: 459 YTTLIDGLCKEGDLDSANELL 479
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA + N ++Q +P+++ + ++ L K A L H+M G+ P+I T N ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C G + A ++ + G +T+T+TTL+ C + ++ +A + E+L +G+Q
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
V++ +L+NG C G +LL
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 72/138 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + + ++ P+I +N I+ L K+ + A+ L + E G+ D VT L++ YC
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+M A +L ++L +G +P +TF L+ G CL+ ++ + + +LA+GI N
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 158 SYGILINGLCKVGQTRAA 175
++ L+ C +AA
Sbjct: 598 TFNSLVKQYCIRNNLKAA 615
Score = 74.3 bits (181), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 71/143 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + P + F +++ K H A + + M G P++VT LI+ C
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A +L ++ K G +PN T+ +++ GLC + ++ A++ E A G+ + V
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y L++ CK G+ A +L+
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILK 550
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 59/103 (57%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
ME +G PD+++ + ++N YC G++ + ++ + ++G KPN+ + ++I LC +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ A + E++ QGI + V Y LI+G CK G RAA +
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Score = 66.6 bits (161), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 65/129 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ K+ A + +M +G+ P IVT N+L+N +C G + +L
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+L +G PN TF +L+K C+ + +K A + ++ ++G+ + +Y L+ G CK
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 172 TRAALRLLR 180
+ A L +
Sbjct: 647 MKEAWFLFQ 655
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 36 VCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
VC R+ + H TP +I ++ ++ + L M+ +G+ P+
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
+I C + +++ A ++++++G P+T+ +TTLI G C ++ A +F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ ++ I + ++Y +I+G C++G A +L
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 54/120 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I+ FN ++ L + M +GI P+ T N L+ YC + A ++
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ RG P+ T+ L+KG C +K A E+ +G ++ +Y +LI G K
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.0 bits (227), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 71/132 (53%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP ++ + I++ + A L H+M +G+ PD VT LIN YC G M AF
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
V +++ G PN +T+TTLI GLC + A + E+ G+Q N +Y ++NGLC
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 168 KVGQTRAALRLL 179
K G A++L+
Sbjct: 503 KSGNIEEAVKLV 514
Score = 83.6 bits (205), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 73/141 (51%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
F+ +++ P + + ++ K A ++M R I PD++T +I+ +C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
+G M A + ++ +G +P+++TFT LI G C +K A + H+ ++ G N V+
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 159 YGILINGLCKVGQTRAALRLL 179
Y LI+GLCK G +A LL
Sbjct: 459 YTTLIDGLCKEGDLDSANELL 479
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA + N ++Q +P+++ + ++ L K A L H+M G+ P+I T N ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C G + A ++ + G +T+T+TTL+ C + ++ +A + E+L +G+Q
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
V++ +L+NG C G +LL
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 72/138 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + + ++ P+I +N I+ L K+ + A+ L + E G+ D VT L++ YC
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+M A +L ++L +G +P +TF L+ G CL+ ++ + + +LA+GI N
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 158 SYGILINGLCKVGQTRAA 175
++ L+ C +AA
Sbjct: 598 TFNSLVKQYCIRNNLKAA 615
Score = 74.3 bits (181), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 71/143 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + P + F +++ K H A + + M G P++VT LI+ C
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A +L ++ K G +PN T+ +++ GLC + ++ A++ E A G+ + V
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y L++ CK G+ A +L+
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILK 550
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 59/103 (57%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
ME +G PD+++ + ++N YC G++ + ++ + ++G KPN+ + ++I LC +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ A + E++ QGI + V Y LI+G CK G RAA +
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Score = 66.6 bits (161), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 65/129 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ K+ A + +M +G+ P IVT N+L+N +C G + +L
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+L +G PN TF +L+K C+ + +K A + ++ ++G+ + +Y L+ G CK
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 172 TRAALRLLR 180
+ A L +
Sbjct: 647 MKEAWFLFQ 655
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 36 VCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
VC R+ + H TP +I ++ ++ + L M+ +G+ P+
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
+I C + +++ A ++++++G P+T+ +TTLI G C ++ A +F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ ++ I + ++Y +I+G C++G A +L
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 54/120 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I+ FN ++ L + M +GI P+ T N L+ YC + A ++
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ RG P+ T+ L+KG C +K A E+ +G ++ +Y +LI G K
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + + P+ + F ++ + + +M +G+ PDIV N L+N +C
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A +++ +++RG +P+ IT+TTLI G C V+ AL+ E+ GI+L++V
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+ L+ G+CK G+ A R LR
Sbjct: 452 GFSALVCGMCKEGRVIDAERALR 474
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA +F+ + + P+++ FN ++ K + L HQME PD+ T + L
Sbjct: 257 SDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSAL 316
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C +M A + ++ KRG PN + FTTLI G N ++ + + ++L++G+
Sbjct: 317 INALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGL 376
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
Q + V Y L+NG CK G AA
Sbjct: 377 QPDIVLYNTLVNGFCKNGDLVAA 399
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Query: 24 LHSHSRSLPNDAVCL-FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+H HSR+ D + + ++L P I+ +N ++ K A ++ M RG+
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PD +T LI+ +C G + A + ++ + G + + + F+ L+ G+C +V A +
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
E+L GI+ + V+Y ++++ CK G + +LL+
Sbjct: 472 ALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I + ++ + A+ + +M+ GI D V + L+ C G++ A
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++L+ G KP+ +T+T ++ C + + E+ + G + V+Y +L+NGLCK
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532
Query: 169 VGQTRAALRLL 179
+GQ + A LL
Sbjct: 533 LGQMKNADMLL 543
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
GI PD VT ++++ +C G F +L ++ G+ P+ +T+ L+ GLC Q+K A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 141 LQFHDELLAQGIQLNQVSYGILING 165
D +L G+ + ++Y L+ G
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
++ NIL+N +C G +S A V +I KR +P ++F TLI G C + +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ + + +Y LIN LCK + A
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA +L+ P + + ++ K L +M+ G +P +VT N+L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG 130
N C LGQM A +L +L G P+ IT+ TL++G
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHY-SIAISLSHQMEFRGIMPDIVTL 89
LP + F ++L+ TP N+IL LV + Y A L G+MP+ +
Sbjct: 134 LPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSY 193
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N+L+ +C +S+A+ + K+L+R P+ ++ LI+G C QV A++ D++L
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G +++SY L+N LC+ Q R A +LL
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF ++L+ P + + ++ + + A+ L M +G +PD ++ L+N
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C Q+ A+ +L ++ +G P+ + + T+I G C D+ A + D++L+ G
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 155 NQVSYGILINGLCKVG 170
N VSY LI GLC G
Sbjct: 329 NSVSYRTLIGGLCDQG 344
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ L + +L P + + +L L + A L +M+ +G PD+V N +
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +C + A VL +L G PN++++ TLI GLC ++ +E++++G
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ L+ G C G+ A
Sbjct: 362 SPHFSVSNCLVKGFCSFGKVEEA 384
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + FN ++ L T+++ +A+ L +M +G PD T N+LI+ C G++ A ++
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G + IT+ TLI G C ++ + A + DE+ G+ N V+Y LI+GLCK
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 169 VGQTRAALRLL 179
+ A +L+
Sbjct: 518 SRRVEDAAQLM 528
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 79/146 (54%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + + +LQ + P + +N +++ L K A+ + QM R P+ VT N LI+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C Q+ A + + +G P+ TF +LI+GLCL + A++ +E+ ++G +
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
++ +Y +LI+ LC G+ AL +L+
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLK 459
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P FN ++ L K H AI + M G PD+ T N +I+ C LG++ A V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +++ R PNT+T+ TLI LC +QV+ A + L ++GI + ++ LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 169 VGQTRAALRLLR 180
R A+ L
Sbjct: 413 TRNHRVAMELFE 424
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV + ++++ +P+ + +N +++ L K A L+ + +GI+PD+ T N LI
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C VA + ++ +G +P+ T+ LI LC ++ AL ++ G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y LI+G CK +TR A +
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIF 493
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNILINCYCHLGQMSVAFSV 108
S + N I+ K A++ +M + G PD T N L+N C G + A +
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +L+ GY P+ T+ ++I GLC +VK A++ D+++ + N V+Y LI+ LCK
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 169 VGQTRAALRLLR 180
Q A L R
Sbjct: 378 ENQVEEATELAR 389
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S+I +N ++ K A + +ME G+ + VT N LI+ C ++ A ++
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ G KP+ T+ +L+ C +K+A + + G + + V+YG LI+GLCK
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 170 GQTRAALRLLR 180
G+ A +LLR
Sbjct: 589 GRVEVASKLLR 599
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 54 FNKILTPLVKTKHYSIAISLSH-QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKI 112
+N++L LV + + +SH +M GI PD+ T N+LI C Q+ A +L +
Sbjct: 157 YNRMLNLLVDGNSLKL-VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 113 LKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQT 172
G P+ TFTT+++G + AL+ ++++ G + VS ++++G CK G+
Sbjct: 216 PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275
Query: 173 RAALRLLR 180
AL ++
Sbjct: 276 EDALNFIQ 283
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ L K++ A L QM G PD T N L+ +C G + A ++
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ G +P+ +T+ TLI GLC +V+ A + + +GI L +Y +I GL + +
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625
Query: 172 TRAALRLLR 180
T A+ L R
Sbjct: 626 TTEAINLFR 634
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 36/167 (21%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI---------------------- 86
P + FN ++ L + AI + M G++PD
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 87 -------------VTLNILINCYCHLGQMSVAFSVLAKILKR-GYKPNTITFTTLIKGLC 132
V++N++++ +C G++ A + + ++ + G+ P+ TF TL+ GLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
VK A++ D +L +G + +Y +I+GLCK+G+ + A+ +L
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA L ++++ P +N +LT + A + M G PDIVT L
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG- 151
I+ C G++ VA +L I +G + +I+GL + A+ E+L Q
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 152 IQLNQVSYGILINGLCKVG 170
+ VSY I+ GLC G
Sbjct: 642 APPDAVSYRIVFRGLCNGG 660
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 88.2 bits (217), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/125 (39%), Positives = 71/125 (56%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
N IL+ L K A L +ME RGI P++V+ N ++ +C M +A V + IL+
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 115 RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRA 174
+G KPN T++ LI G N + AL+ + + + I++N V Y +INGLCKVGQT
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 175 ALRLL 179
A LL
Sbjct: 567 ARELL 571
Score = 70.5 bits (171), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 48 TPSIIEFN-----KILTPLVKTKHYSIAISL-SHQMEFRGIMPDIVTLNILINCYCHLGQ 101
T S IE N I+ L K S A L ++ +E + + ++ N +I+ + G+
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
M A + ++ G PN IT+T+L+ GLC N+++ +AL+ DE+ +G++L+ +YG
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659
Query: 162 LINGLCKVGQTRAALRLL 179
LI+G CK +A L
Sbjct: 660 LIDGFCKRSNMESASALF 677
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 66/143 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L N + + R S + +N I+ K A++ +M GI P+++T L+N C
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC 630
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+M A + ++ +G K + + LI G C ++ A ELL +G+ +Q
Sbjct: 631 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
Y LI+G +G AAL L +
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYK 713
Score = 60.1 bits (144), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 68/138 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ AV + + +P++I + ++ L K A+ + +M+ +G+ DI L
Sbjct: 601 DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C M A ++ +++L+ G P+ + +LI G + AL + ++L G+
Sbjct: 661 IDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGL 720
Query: 153 QLNQVSYGILINGLCKVG 170
+ + +Y LI+GL K G
Sbjct: 721 RCDLGTYTTLIDGLLKDG 738
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Query: 21 FSSLHSHSRSLPN--DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME 78
++SL S R+L N A+ L+ ++L+ + + ++ L+K + +A L +M+
Sbjct: 692 YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
Query: 79 FRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVK 138
G++PD + +++N GQ + ++ K PN + + +I G +
Sbjct: 752 AVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLD 811
Query: 139 RALQFHDELLAQGIQLNQVSYGILING 165
A + HDE+L +GI + ++ IL++G
Sbjct: 812 EAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS + ++ VK + AI L +M GI ++V LI +C + A +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+ K G PN++TF+ LI+ N ++++AL+F+ ++ G+ + +I G K
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 169 VGQTRAALRLL 179
+ AL+L
Sbjct: 422 GQKHEEALKLF 432
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ L + +L + +++ ++T K A+ L +ME G P+ VT ++L
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I + G+M A K+ G P+ T+I+G + + AL+ DE G+
Sbjct: 381 IEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 440
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N +++ LCK G+T A LL
Sbjct: 441 A-NVFVCNTILSWLCKQGKTDEATELL 466
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI-MPDIVTLN 90
P +A+ + +R ++ P + ++ + KT ++A SL +M+ + + +P T
Sbjct: 249 PAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYT 308
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+I G M A + ++L G N + T+LI G C N+ + AL D++ +
Sbjct: 309 SVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKE 368
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G N V++ +LI K G+ AL +
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 66/150 (44%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
RS A LF+ LL+ PS +N +++ + A+ L +M G+ D+ T
Sbjct: 667 RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
LI+ G + +A + ++ G P+ I +T ++ GL Q + ++ +E+
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+ N + Y +I G + G A RL
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 82/147 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A LF +++ P+++ + ++ L +K+ A+ +M+ +GI P++ T + L
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSL 268
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ C G+ A + ++ RG +PN +T+TTLI GLC +++ A++ D + QG+
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + YG +I+G C + + R A L
Sbjct: 329 KPDAGLYGKVISGFCAISKFREAANFL 355
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKH-YSIAISLSHQMEFRGIMPDIVTLNI 91
N A + + ++ P++ N ++ L + + + +M RG PD T
Sbjct: 138 NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGT 197
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ C G++ A + +++++ P +T+T+LI GLC + V A+++ +E+ ++G
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
I+ N +Y L++GLCK G++ A+ L
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P D++ +F+++ PS + +L LV+ ++A M G+ P + +LN+
Sbjct: 102 PFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV 161
Query: 92 LINCYC-HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
LI C + G + + ++ KRG P++ T+ TLI GLC ++ A + E++ +
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
V+Y LINGLC A+R L
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLE 251
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +++ L + A L +M + P +VT LIN C + A
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ +G +PN T+++L+ GLC + + +A++ + ++A+G + N V+Y LI GLCK
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 169 VGQTRAALRLL 179
+ + A+ LL
Sbjct: 310 EQKIQEAVELL 320
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 15 FLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLS 74
F + L RSL A+ LF ++ P+++ + ++T L K + A+ L
Sbjct: 263 FTYSSLMDGLCKDGRSL--QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELL 320
Query: 75 HQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITF-------TTL 127
+M +G+ PD +I+ +C + + A + L +++ G PN +T+ +
Sbjct: 321 DRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEV 380
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++GLC N RA + + ++GI + + L+ LCK G+ + A++L+
Sbjct: 381 VRGLCAN-YPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLV 431
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ ++ ++ L K A+ L M RG P++VT LI C ++ A +
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI------- 161
L ++ +G KP+ + +I G C + + A F DE++ GI N++++ I
Sbjct: 320 LDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNE 379
Query: 162 LINGLCKVGQTRA 174
++ GLC +RA
Sbjct: 380 VVRGLCANYPSRA 392
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 87.4 bits (215), Expect = 4e-18, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 78/149 (52%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
S+ N A+ L++ + PSI F +L+ L + A+ L ++M + P+ V
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T N++I YC G MS AF L ++ ++G P+T ++ LI GLCL Q A F D L
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+LN++ Y L++G C+ G+ AL
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEAL 632
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 2/147 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK-HYSIAISLSHQMEFRGIMPDIVTLNI 91
N+A L +++ + P+ + + L L K + A+ L H +G++ + T N+
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL-HNAILKGLLANTATYNM 792
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI +C G++ A ++ +++ G P+ IT+TT+I LC + VK+A++ + + +G
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
I+ ++V+Y LI+G C G+ A L
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 80/147 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A LF+R+ ++ P+ + ++ ++ + A+S +M G+ + N L
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN +C G +S A +A+++ + +P +T+T+L+ G C ++ +AL+ + E+ +GI
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++ L++GL + G R A++L
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLF 530
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 76/145 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ L R++ +P++ +N ++ L K + + A L +M G+ P+ VT +ILI
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C G++ A S L +++ G K + + +LI G C + A F E++ + ++
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
V+Y L+ G C G+ ALRL
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRL 494
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Query: 34 DAVCLFNRLL-QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
D V +F ++ ++ P + + +L LVK +H+ +A+ L + M GI PD+ +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C L +S A ++A + G N + + LI GLC +V A+ +L + +
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + V+Y L+ GLCKV + L ++
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
++ + P+++ + ++ + A+ L H+M +GI P I T L++ G
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
+ A + ++ + KPN +T+ +I+G C + +A +F E+ +GI + SY
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 162 LINGLCKVGQTRAA 175
LI+GLC GQ A
Sbjct: 583 LIHGLCLTGQASEA 596
Score = 66.6 bits (161), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 70/138 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ + +L +R +PS + ++ L K A++L ++ G+ P++ N LI+ C
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A + ++ K G +PN +T++ LI C ++ AL F E++ G++L+
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 158 SYGILINGLCKVGQTRAA 175
Y LING CK G AA
Sbjct: 439 PYNSLINGHCKFGDISAA 456
Score = 65.1 bits (157), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 66/131 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S+ +N ++ K S A +M + + P +VT L+ YC G+++ A +
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++ +G P+ TFTTL+ GL ++ A++ +E+ ++ N+V+Y ++I G C+
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 170 GQTRAALRLLR 180
G A L+
Sbjct: 556 GDMSKAFEFLK 566
Score = 63.2 bits (152), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LFN ++ + P + + ++ L + K S A + ME G +IV N+LI+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C ++ A + + + KP+ +T+ TL+ GLC + + L+ DE+L
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
++ + L+ GL K G+ AL L++
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVK 356
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 53/101 (52%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+S+ +M RG+ D+V +LI+ + F +L ++ RG KP+ + +T++I
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
K A D ++ +G N+V+Y +INGLCK G
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 60/131 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ + ++ L K + + I + + +M P ++ L+ G++ A ++
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +++ G PN + LI LC + A D + G++ N V+Y ILI+ C+
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 169 VGQTRAALRLL 179
G+ AL L
Sbjct: 415 RGKLDTALSFL 425
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 37/154 (24%)
Query: 62 VKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNT 121
+K K + L +M RG+ PD V +I+ G AF + ++ G PN
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 122 ITFTTLIKGLC--------------------LNDQV----------------KRALQFHD 145
+T+T +I GLC + +QV ++A++ H+
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+L +G+ N +Y +LI G C+ G+ A L+
Sbjct: 778 AIL-KGLLANTATYNMLIRGFCRQGRIEEASELI 810
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 50/102 (49%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N ++ + A L +M G+ PD +T +IN C + A + +
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
++G +P+ + + TLI G C+ ++ +A + +E+L QG+ N
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 59/119 (49%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+I+ +N ++ L K + A+ + + + + PD+VT L+ C + + + ++
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++L + P+ ++L++GL +++ AL ++ G+ N Y LI+ LCK
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S+ +N ++ L K + A +M+ RGI P++VT N ++ Y G + VL
Sbjct: 424 SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVL 483
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
K+L G+KP+ ITF+ +I LC ++K A E+L GI+ N+++Y ILI C
Sbjct: 484 EKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCST 543
Query: 170 GQTRAALRLL 179
G T +++L
Sbjct: 544 GDTDRSVKLF 553
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 48 TPSIIEFNKILTPL-----VKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQM 102
+P+++ FN L+ VK H + L H G PD++T +++INC C ++
Sbjct: 457 SPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH-----GFKPDVITFSLIINCLCRAKEI 511
Query: 103 SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
AF ++L+ G +PN IT+ LI+ C R+++ ++ G+ + +Y
Sbjct: 512 KDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNAT 571
Query: 163 INGLCKVGQTRAALRLLR 180
I CK+ + + A LL+
Sbjct: 572 IQSFCKMRKVKKAEELLK 589
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 67/143 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F+ + P + ++ L+ + +S QM G++ + + N +I+C C
Sbjct: 377 IFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC 436
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ A L ++ RG PN +TF T + G + VK+ ++LL G + + +
Sbjct: 437 KARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVI 496
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
++ ++IN LC+ + + A +
Sbjct: 497 TFSLIINCLCRAKEIKDAFDCFK 519
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS +N ++ LVK+ +A QM G PD T NILI+ C G + A +
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+ ++ + G +PN T+T LI G + +V AL+ + + + + N+ + ++G+
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGI 295
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA F +L+ P+ I +N ++ T ++ L +M+ G+ PD+ N I
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+C + ++ A +L +L+ G KP+ T++TLIK L + + A + + G
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
Q+ F G+ P N +I+ + +A+ ++ G KP+ T+ LI G+C
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
V A++ ++ +G + N +Y ILI+G G+ AL+ L
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLE 274
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+AV LF+++ + P+++ FN ++ L Y A +M RG+ P ++T +IL
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ ++ A+ VL ++ K+G+ PN I + LI + +A++ D ++++G+
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
L +Y LI G CK GQ A RLL+
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLK 424
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + ++ ++ K + +M + + P+ V N LI YC G++S+A +
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +G PN+ T+T+LIKG+ + +V+ A +E+ +G++ N Y LI+G K
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 169 VGQTRAALRLLR 180
+GQ LLR
Sbjct: 728 LGQMVKVECLLR 739
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS N +LT LV+ + + + +G+ PD+ IN +C G++ A +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+K+ + G PN +TF T+I GL + + A F ++++ +G++ ++Y IL+ GL +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 169 VGQTRAALRLLR 180
+ A +L+
Sbjct: 343 AKRIGDAYFVLK 354
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
N +L L + A + ++ RG + D V+ N LI+ C ++ AF L +++K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 115 RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRA 174
RG KP+ T++ LI GL ++V+ A+QF D+ G+ + +Y ++I+G CK +T
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 175 A 175
Sbjct: 629 G 629
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
+++ L K +S A+ L Q +G + D T N L++ C G++ AF + +IL RG
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ +++ TLI G C ++ A F DE++ +G++ + +Y ILI GL + + A+
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 177 RL 178
+
Sbjct: 596 QF 597
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N +++ K A +M RG+ PD T +ILI ++ ++ A
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ G P+ T++ +I G C ++ + +F DE++++ +Q N V Y LI C+ G+
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 172 TRAALRL 178
AL L
Sbjct: 661 LSMALEL 667
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 67/142 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
F+ ++ P+ + +N ++ ++ S+A+ L M+ +GI P+ T LI
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ ++ A + ++ G +PN +T LI G Q+ + E+ ++ + N++
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y ++I G + G A RLL
Sbjct: 752 TYTVMIGGYARDGNVTEASRLL 773
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A L +L + + F ++ L + A+ +M R + P L L
Sbjct: 417 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G+ S A + + L +G+ +T T L+ GLC ++ A + E+L +G
Sbjct: 477 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+++VSY LI+G C + A L
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFL 563
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 44 QMRH---TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
M+H +P+ + ++ + A L +M G+ P++ LI+ Y LG
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
QM +L ++ + PN IT+T +I G + V A + +E+ +GI + ++Y
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 161 ILINGLCKVGQTRAALR 177
I G K G A +
Sbjct: 790 EFIYGYLKQGGVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+AV LF+++ + P+++ FN ++ L Y A +M RG+ P ++T +IL
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ ++ A+ VL ++ K+G+ PN I + LI + +A++ D ++++G+
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
L +Y LI G CK GQ A RLL+
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLK 424
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + ++ ++ K + +M + + P+ V N LI YC G++S+A +
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +G PN+ T+T+LIKG+ + +V+ A +E+ +G++ N Y LI+G K
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 169 VGQTRAALRLLR 180
+GQ LLR
Sbjct: 728 LGQMVKVECLLR 739
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS N +LT LV+ + + + +G+ PD+ IN +C G++ A +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+K+ + G PN +TF T+I GL + + A F ++++ +G++ ++Y IL+ GL +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 169 VGQTRAALRLLR 180
+ A +L+
Sbjct: 343 AKRIGDAYFVLK 354
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
N +L L + A + ++ RG + D V+ N LI+ C ++ AF L +++K
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 115 RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRA 174
RG KP+ T++ LI GL ++V+ A+QF D+ G+ + +Y ++I+G CK +T
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 175 A 175
Sbjct: 629 G 629
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
+++ L K +S A+ L Q +G + D T N L++ C G++ AF + +IL RG
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ +++ TLI G C ++ A F DE++ +G++ + +Y ILI GL + + A+
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 177 RL 178
+
Sbjct: 596 QF 597
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N +++ K A +M RG+ PD T +ILI ++ ++ A
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ G P+ T++ +I G C ++ + +F DE++++ +Q N V Y LI C+ G+
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 172 TRAALRL 178
AL L
Sbjct: 661 LSMALEL 667
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 67/142 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
F+ ++ P+ + +N ++ ++ S+A+ L M+ +GI P+ T LI
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ ++ A + ++ G +PN +T LI G Q+ + E+ ++ + N++
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y ++I G + G A RLL
Sbjct: 752 TYTVMIGGYARDGNVTEASRLL 773
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A L +L + + F ++ L + A+ +M R + P L L
Sbjct: 417 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G+ S A + + L +G+ +T T L+ GLC ++ A + E+L +G
Sbjct: 477 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+++VSY LI+G C + A L
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFL 563
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 44 QMRH---TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
M+H +P+ + ++ + A L +M G+ P++ LI+ Y LG
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
QM +L ++ + PN IT+T +I G + V A + +E+ +GI + ++Y
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 161 ILINGLCKVGQTRAALR 177
I G K G A +
Sbjct: 790 EFIYGYLKQGGVLEAFK 806
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
R L R P + +N ++ L K Y A L +M +GI P++++ + LIN C+ G
Sbjct: 236 RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL-AQGIQLNQVSY 159
Q+ +AFS L ++LKRG PN T ++L+KG L AL ++++ G+Q N V+Y
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAY 355
Query: 160 GILINGLCKVGQTRAALRLL 179
L+ G C G A+ +
Sbjct: 356 NTLVQGFCSHGNIVKAVSVF 375
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 30/180 (16%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L AV +F R+ + PS+ +N +L L+ + + M+ G P++ T
Sbjct: 125 GLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTY 184
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTT----------------------- 126
N+L+ C ++ A +L ++ +G P+ +++TT
Sbjct: 185 NVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEP 244
Query: 127 -------LIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
LI GLC K A + E++ +GI N +SY LIN LC GQ A L
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R + AV ++N++L P+++ + ++ L + + A SL M P + T
Sbjct: 400 RGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 459
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGY-KPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
N I C G++ A V ++ ++ PN +T+ L+ GL ++++ A E+
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G++ + +Y L++G C G AL+L+
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 29 RSLPNDAVCLFNRLLQ-MRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
R DA+ L+N++++ P+++ +N ++ + A+S+ ME G P+I
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T LIN + G + A + K+L G PN + +T +++ LC + + K A + +
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + ++ I GLC G+ A ++ R
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L +++ +P++I ++ ++ L + +A S QM RG P+I TL+ L+
Sbjct: 268 LMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF 327
Query: 98 HLGQMSVAFSVLAKILKR-GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
G A + ++++ G +PN + + TL++G C + + +A+ + G N
Sbjct: 328 LRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNI 387
Query: 157 VSYGILINGLCKVGQTRAAL 176
+YG LING K G A+
Sbjct: 388 RTYGSLINGFAKRGSLDGAV 407
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 44 QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS 103
Q R P+I+ +N++L L K A L+ ++ RG+ T N L++ C+ G
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545
Query: 104 VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG---IQLNQVSYG 160
+A ++ K++ G P+ IT +I C + +RA Q D L++ G + + +SY
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYT 604
Query: 161 ILINGLCK 168
+I GLC+
Sbjct: 605 NVIWGLCR 612
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 30/160 (18%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG-------- 100
P++ +N +L L K A L +M +G PD V+ +I+ C +G
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 101 ----------------------QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVK 138
AF ++ +++++G PN I+++TLI LC + Q++
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 139 RALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
A F ++L +G N + L+ G G T AL L
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 68 SIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL--KRGYKPNTITFT 125
IA+ L +M G PD +T+N++I YC G+ A +L + +R ++P+ I++T
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYT 604
Query: 126 TLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
+I GLC ++ + + + +++ GI + ++ +LIN
Sbjct: 605 NVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNILINCYCHLGQMSVAF 106
PS+ FN + L A + QME + P+IVT N L++ ++ A+
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+ +I RG + ++ T+ TL+ G C ALQ +++ G ++++ ++I
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 167 CKVGQTRAALRLL 179
CK G+ A ++L
Sbjct: 574 CKQGKAERAAQML 586
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV +F+ + ++ +P+I + ++ K A+ + ++M G P++V ++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ-GIQ 153
C + A S++ + K P+ TF IKGLC ++ A + ++ Q
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y L++GL K + A L R
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTR 517
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L +++ + P ++ F+ ++ LVK S A + M RGI P +T N +I
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C +++ A +L + + P+ +TF+TLI G C +V ++ E+ +GI
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+G C+VG AA LL
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLL 274
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Query: 33 NDAVCLFNRLLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
D N L +M T ++ +N I+ L K H+ A +L +M +GI PD++T
Sbjct: 55 GDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY 114
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+ +I+ +C G+ + A +L +++R P+ +TF+ LI L +V A + + ++L
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+GI ++Y +I+G CK + A R+L
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +I ++ ++ ++ ++ A L M R I PD+VT + LIN G++S A +
Sbjct: 109 PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI 168
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+L+RG P TIT+ ++I G C D++ A + D + ++ + V++ LING CK
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Query: 169 VGQTRAALRLL 179
+ + +
Sbjct: 229 AKRVDNGMEIF 239
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A ++ +L+ P+ I +N ++ K + A + M + PD+VT + L
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN YC ++ + ++ +RG NT+T+TTLI G C + A + +++ G+
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N +++ ++ LC + R A +L
Sbjct: 283 APNYITFQSMLASLCSKKELRKAFAILE 310
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+++ G +P+ +TFTTL+ GLC +V +AL D ++ +G Q YG +INGLCK+G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 172 TRAALRLL 179
T +AL LL
Sbjct: 57 TESALNLL 64
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA + + + +P ++ F+ ++ K K + + +M RGI+ + VT L
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
I+ +C +G + A +L ++ G PN ITF +++ LC ++++A ++L
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G PD+VT L+N C G++ A +++ ++++ G++P + T+I GLC + A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVG 170
L ++ I+ + V Y +I+ LCK G
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDG 90
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+L+ P + +N ++ K A + +M + PD VT NI+I C G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ +A VL ++L +P IT+T LI+ L V AL+ DE+L++G++ + +Y
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 161 ILINGLCKVGQTRAALRLLR 180
+I G+CK G A ++R
Sbjct: 268 TIIRGMCKEGMVDRAFEMVR 287
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA + +R+ +P + +N ++ L +A+ + +Q+ P ++T IL
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I G + A ++ ++L RG KP+ T+ T+I+G+C V RA + L +G
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + +SY IL+ L G+ +L+
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLM 321
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L + +L P + +N I+ + K A + +E +G PD+++ NIL
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ + G+ ++ K+ PN +T++ LI LC + +++ A+ + +G+
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ SY LI C+ G+ A+ L
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 75/146 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ +F +L ++ +P+ +N + + L + A+ + +M GI PD +T N +
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+C C G + AF +L + + P+ +T+ ++ G C +++ A+ + ++ G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+ N+ +Y +LI G+ G A+ L
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
SR + A+ + N+LL P++I + ++ + A+ L +M RG+ PD+
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T N +I C G + AF ++ + +G +P+ I++ L++ L + + + ++
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ N V+Y ILI LC+ G+ A+ LL+
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP ++ ++ + +AI M G +PDIV N ++ C G+ A
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ K+ + G PN+ ++ T+ L + RAL E+++ GI ++++Y +I+ LC
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 168 KVGQTRAALRLL 179
+ G A LL
Sbjct: 485 REGMVDEAFELL 496
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L ++ + P+++ ++ ++T L + A++L M+ +G+ PD + + LI +C
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ VA L ++ G P+ + + T++ LC N + +AL+ +L G N
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 158 SYGILINGLCKVGQTRAALRLL 179
SY + + L G AL ++
Sbjct: 440 SYNTMFSALWSSGDKIRALHMI 461
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +I +N +L L+ + L +M P++VT +ILI C G++ A ++
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + ++G P+ ++ LI C ++ A++F + +++ G + V+Y ++ LCK
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 169 VGQTRAALRLL 179
G+ AL +
Sbjct: 416 NGKADQALEIF 426
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 60/132 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I+ +N +L L K A+ + ++ G P+ + N + + G A +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +++ G P+ IT+ ++I LC V A + ++ + + V+Y I++ G CK
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 169 VGQTRAALRLLR 180
+ A+ +L
Sbjct: 521 AHRIEDAINVLE 532
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 56 KILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKR 115
KI ++ +Y ++ L M +G PD++ LI + L + A V+ +IL++
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEK 152
Query: 116 GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+P+ + LI G C +++ A + D + ++ + V+Y I+I LC G+ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 176 LRLL 179
L++L
Sbjct: 213 LKVL 216
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 85.1 bits (209), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 77/139 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A+ LFN L P++I +N ++ L A L+++M +G++P++ T NIL
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C +G +S A ++ ++ +GY P+ TF LI G +++ AL+ D +L G+
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 153 QLNQVSYGILINGLCKVGQ 171
+ +Y L+NGLCK +
Sbjct: 493 DPDVYTYNSLLNGLCKTSK 511
Score = 78.2 bits (191), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 77/142 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++L + + FNK+L L K L ++ RG++P++ T N+ I C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A ++ ++++G KP+ IT+ LI GLC N + + A + +++ +G++ +
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y LI G CK G + A R++
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIV 344
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 70/144 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV + L++ P +I +N ++ L K + A +M G+ PD T N LI
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC G + +A ++ + G+ P+ T+ +LI GLC + RAL +E L +GI+
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N + Y LI GL G A +L
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQL 413
Score = 73.6 bits (179), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 62/122 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +N ++ K +A + F G +PD T LI+ CH G+ + A ++
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ L +G KPN I + TLIKGL + A Q +E+ +G+ ++ IL+NGLCK
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 169 VG 170
+G
Sbjct: 439 MG 440
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 71/146 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L N + + P + FN ++ L K S A L M +G PDI T NILI
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y +M A +L +L G P+ T+ +L+ GLC + + ++ + ++ +G
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N ++ IL+ LC+ + AL LL
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLL 554
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 67/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L ++ + P I FN ++ A+ + M G+ PD+ T N L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C + ++++G PN TF L++ LC ++ AL +E+ + +
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V++G LI+G CK G A L R
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 71/146 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV +F R+ P++ +N I++ LV + ++ A + +M RGI PD+ + I +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C + A +L + +G + N + + T++ G + + ++LA G+
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS 213
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
L ++ L+ LCK G + +LL
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLL 239
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D + + +++ P++ FN +L L + + A+ L +M+ + + PD VT LI
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYK--PNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+ +C G + A+++ K ++ YK +T T+ +I V A + E++ +
Sbjct: 574 DGFCKNGDLDGAYTLFRK-MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + +Y ++++G CK G + L
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 69/146 (47%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
S P+ A+ L N + +++ + ++ + + L +M G+ + T
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N L+ C G + +L K++KRG PN T+ I+GLC ++ A++ L+
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAA 175
QG + + ++Y LI GLCK + + A
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEA 305
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 35 AVCLFNRLLQM-RHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
A LF ++ + + + S +N I+ + + ++A L +M R + PD T +++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C G +++ + L ++++ G+ P+ T +I LC+ D+V A ++ +G+
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Query: 154 LNQVSYGILINGLCKVGQTRAA 175
V N +C V + A
Sbjct: 705 PEAV------NTICDVDKKEVA 720
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L +++ + P I+ F+ ++ VK + S A + +M I P +T N +
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C ++ A +L + +G P+ +TF+TLI G C +V ++ E+ +GI
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y LI+G C+VG AA LL
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLL 208
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A ++ +L+ P+ I +N ++ K A + M +G PD+VT + L
Sbjct: 97 SEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN YC ++ + ++ +RG NT+T+TTLI G C + A +E+++ G+
Sbjct: 157 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +++ ++ GLC + R A +L
Sbjct: 217 APDYITFHCMLAGLCSKKELRKAFAILE 244
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + + P+++ +N ++ + +S A L M + I PDIVT + LIN +
Sbjct: 32 LFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFV 91
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++S A + ++L+ P TIT+ ++I G C D+V A + D + ++G + V
Sbjct: 92 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 158 SYGILINGLCKVGQTRAALRLL 179
++ LING CK + + +
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIF 173
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
I+ L K ++ A +L +M +GI P+++T N +I+ +CH G+ S A +L ++++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
P+ +TF+ LI +V A + + E+L I ++Y +I+G CK + A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 177 RLL 179
R+L
Sbjct: 136 RML 138
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 60/115 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA + + + +P ++ F+ ++ K K + + +M RGI+ + VT L
Sbjct: 132 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 191
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
I+ +C +G + A +L +++ G P+ ITF ++ GLC ++++A ++L
Sbjct: 192 IHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D ++ +++ + P++ FN ++ L KT + A + M+ G P++V+ N LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 94 NCYCHLG---QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+ YC LG +M A +VL ++++ PN TF LI G +D + +++ E+L Q
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
++ N +SY LINGLC G+ A+ +
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISM 353
Score = 79.7 bits (195), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ + ++++ P++I +N ++ K A+ + ++ +G +P N+L
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ YC LG++ F++ ++ + G P+ T+ LI GLC N ++ A + D+L ++G+
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V++ IL+ G C+ G++R A LL+
Sbjct: 468 P-DLVTFHILMEGYCRKGESRKAAMLLK 494
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 21 FSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
+ L + + DAV +++ +P++ FN ++ K + ++ + +M +
Sbjct: 268 YCKLGGNGKMYKADAV--LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
+ P++++ N LIN C+ G++S A S+ K++ G +PN IT+ LI G C ND +K A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
L + QG Y +LI+ CK+G+
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ L + + A L Q+ +G +PD+VT +IL+ YC G+ A +
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAML 492
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ-GIQLNQVSYGILINGLC 167
L ++ K G KP +T+ ++KG C +K A ++ + +++N SY +L+ G
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 168 KVGQTRAALRLL 179
+ G+ A LL
Sbjct: 553 QKGKLEDANMLL 564
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ K +A+ + H M +G P++ + IL++ +C LG++ A++V
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ G KPNT+ F LI C ++ A++ E+ +G + + ++ LI+GLC+
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 169 VGQTRAALRLLR 180
V + + AL LLR
Sbjct: 507 VDEIKHALWLLR 518
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 77/146 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L ++ + + +N ++ ++ A L ++M F+G D +T N LI
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A S+ K+L+ G+ P+ I+ LI GLC + V+ A++F E++ +G
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ V++ LINGLC+ G+ L + R
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFR 658
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A + N + P+ + FN +++ K A+ + +M +G PD+ T N L
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + ++ A +L ++ G NT+T+ TLI ++K A + +E++ QG
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
L++++Y LI GLC+ G+ A L
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFE 588
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A LF ++L+ H PS I N ++ L ++ A+ +M RG PDIVT N L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G++ ++ K+ G P+T+TF TL+ LC V A DE + G
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 153 QLNQVSYGILINGL 166
N ++ IL+ +
Sbjct: 701 VPNHRTWSILLQSI 714
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+AV +F + + P + FN +++ L + A+ L M G++ + VT N LI
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N + G++ A ++ +++ +G + IT+ +LIKGLC +V +A +++L G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
+ +S ILINGLC+ G A+
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEF 621
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F +L + P++ F ++ A+SL M G +P+ V LI+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+++ A +L ++ G P+ TF +I GLC D++ A + + +L +G
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ ++YG L+NGLCK+G+ AA L
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLF 345
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAIS-LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P I+ FN ++ V A + LS + GI+PD+ T N LI Y G + +A
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
VL + +G KPN ++T L+ G C ++ A +E+ A G++ N V + LI+ C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 168 KVGQTRAALRLLR 180
K + A+ + R
Sbjct: 471 KEHRIPEAVEIFR 483
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N ++ L + A SL +M G P ++ NILIN C G + A +
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ RG P+ +TF +LI GLC +++ L +L A+GI + V++ L++ LCK G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 172 TRAALRLL 179
A LL
Sbjct: 685 VYDACLLL 692
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 24 LHSHSR-SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+HS S+ + N+A+ L + M P FN ++ L K + A + ++M RG
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILK---------------------------- 114
PD +T L+N C +G++ A + +I K
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 115 ----RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
G P+ T+ +LI G V AL+ ++ +G + N SY IL++G CK+G
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 171 QTRAALRLL 179
+ A +L
Sbjct: 439 KIDEAYNVL 447
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ L + + P+ + + ++ L K + A+ L +M G +PD T N +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
I C +++ A ++ ++L RG+ P+ IT+ L+ GLC +V A
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 39 FNRLLQMR-HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
F + + +R TP I+ FN ++ L + +++ +++ GI PD VT N L++ C
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
G + A +L + ++ G+ PN T++ L++ + + + R
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 76/131 (58%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ FN+++ L + A+ L +M G+ PDIV+ N+LI+ C G M+ A+ +
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L+ + +P+ +TFT +I C + A F +L +GI L++V+ LI+G+CK
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 169 VGQTRAALRLL 179
VG+TR AL +L
Sbjct: 524 VGKTRDALFIL 534
Score = 84.0 bits (206), Expect = 6e-17, Method: Composition-based stats.
Identities = 48/151 (31%), Positives = 78/151 (51%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R L + A LF+ ++ P++ + ++ L + A + +M I P ++T
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT 373
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N LIN YC G++ AF +L + KR KPN TF L++GLC + +A+ +L
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
G+ + VSY +LI+GLC+ G A +LL
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 67/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ + ++ ++ L + A L QM +G P T +LI C G + AF++
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++ RG KPN T+T LI GLC + +++ A +++ I + ++Y LING CK
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 169 VGQTRAALRLL 179
G+ A LL
Sbjct: 384 DGRVVPAFELL 394
Score = 70.1 bits (170), Expect = 8e-13, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P AV L R+L +P I+ +N ++ L + H + A L M I PD +T
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+IN +C G+ VA + L +L++G + +T TTLI G+C + + AL + L+
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 152 IQLNQVSYGILINGL---CKVGQTRAAL 176
I S ++++ L CKV + A L
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAML 569
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 70/133 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+ + + ++ ++ PS++ + ++ L+++ + + + M+ G +P++ I+I
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C G++ A +L+ + G PN +T+T ++KG N ++ RAL+ ++ +G +
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683
Query: 154 LNQVSYGILINGL 166
LN Y L+ G
Sbjct: 684 LNDRIYSSLLQGF 696
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 70/147 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ + L++MR + N IL L K +++ ++ G++P +VT L+
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ G ++ +F +L + G PN +T +I GLC +V+ A + + G+
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y +++ G G+ AL +R
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVR 675
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ +L L K +A +ME G + ++ ++N C G A ++KIL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ-GIQLNQVSYGILINGLCKVGQT 172
K G+ ++ T+L+ G C ++ AL+ D + + N VSY ILI+GLC+VG+
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 173 RAALRL 178
A L
Sbjct: 283 EEAFGL 288
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 79/147 (53%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ N + P++I N IL + T + A L M +G P +VT NIL
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G + A +L K+ + G +PN++++ L+ G C ++ RA+++ + ++++G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y ++ LCK G+ A+ +L
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEIL 437
Score = 83.6 bits (205), Expect = 7e-17, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 76/146 (52%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DAV + N+L +P +I +N ++ L K AI L +M + + PD +T + L+
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
G++ A + + G +PN +TF +++ GLC + Q RA+ F ++ +G +
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N+ SY ILI GL G + AL LL
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELL 577
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 82/146 (56%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L +L+ +PS++ FN ++ L + AI + +M G P+ ++ N L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C +M A L +++ RG P+ +T+ T++ LC + +V+ A++ ++L ++G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++Y +I+GL K G+T A++LL
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLL 472
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 77/145 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ R++ P I+ +N +LT L K A+ + +Q+ +G P ++T N +I+
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
G+ A +L ++ + KP+TIT+++L+ GL +V A++F E GI+
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V++ ++ GLCK QT A+ L
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFL 542
Score = 78.2 bits (191), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 69/132 (52%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP ++ +N ++ + K AI + M G P+++T NI++ C G+ A
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+LA +L++G+ P+ +TF LI LC + RA+ +++ G Q N +SY L++G C
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 168 KVGQTRAALRLL 179
K + A+ L
Sbjct: 391 KEKKMDRAIEYL 402
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ + +R M +P ++ +N IL L + A+ + +M R PD++T IL
Sbjct: 189 NNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C + A +L ++ RG P+ +T+ L+ G+C ++ A++F +++ + G
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
Q N +++ I++ +C G+ A +LL
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLL 332
Score = 77.0 bits (188), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 77/151 (50%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+ L A+ + ++ Q P+ + +N +L K K AI +M RG PDIVT
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N ++ C G++ A +L ++ +G P IT+ T+I GL + +A++ DE+
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
A+ ++ + ++Y L+ GL + G+ A++
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Score = 74.7 bits (182), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 74/145 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +R+LQ P +I + ++ + A+ L +M RG PD+VT N+L+N
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A L + G +PN IT +++ +C + A + ++L +G
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V++ ILIN LC+ G A+ +L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDIL 367
Score = 70.9 bits (172), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 47 HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
+ P II ++ + A + +E G +PD++T N++I+ YC G+++ A
Sbjct: 133 NVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNAL 192
Query: 107 S--------------------------------VLAKILKRGYKPNTITFTTLIKGLCLN 134
S VL ++L+R P+ IT+T LI+ C +
Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 135 DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
V A++ DE+ +G + V+Y +L+NG+CK G+ A++ L
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+E N L +V+T M + G +PDI+ LI +C LG+ A +L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ G P+ IT+ +I G C ++ AL D + + + V+Y ++ LC G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 172 TRAALRLL 179
+ A+ +L
Sbjct: 220 LKQAMEVL 227
Score = 60.5 bits (145), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 56/118 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + + P I ++ ++ L + AI H+ E GI P+ VT N ++
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
C Q A L ++ RG KPN ++T LI+GL K AL+ +EL +G+
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 84.0 bits (206), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 69/126 (54%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
NKI K A S ME +GI P++V N ++ +C + M +A S+ +++L+
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 115 RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRA 174
+G +PN T++ LI G N + A +++ A + N+V Y +INGLCKVGQT
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 175 ALRLLR 180
A +L+
Sbjct: 573 AKEMLQ 578
Score = 66.6 bits (161), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 34 DAVCLFNRL---LQMRHTPSIIE-------FNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+ C NR+ L+M H +E + ++ K A +L ++ G+M
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P++ N LI+ + +LG+M A + K++ G + T+TT+I GL + + A
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ ELL GI +++ + +L+NGL K GQ A ++L
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L N + + R++ S +N I+ VK A+ +M G P++VT LIN +C
Sbjct: 577 LQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFC 636
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+M +A + ++ K + + LI G C + +K A EL G+ N
Sbjct: 637 KSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 696
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
Y LI+G +G+ AA+ L +
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYK 719
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 34 DAVCLFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA F ++++ + P+++ +N ++ + K+ +A S+ +M +G+ P+ T +IL
Sbjct: 466 DAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSIL 525
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG- 151
I+ + A+ V+ ++ ++ N + + T+I GLC Q +A + L+ +
Sbjct: 526 IDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR 585
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ SY +I+G KVG T +A+ R
Sbjct: 586 YSMSCTSYNSIIDGFVKVGDTDSAVETYR 614
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 6 YRWFHRNPTFLLAMP----FSSLHSHSRSLP--NDAVCLFNRLLQMRHTPSIIEFNKILT 59
Y F P L MP ++SL S R+L + A+ L+ +++ + + + ++
Sbjct: 680 YTLFSELPELGL-MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 60 PLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKP 119
L+K + ++A L ++ GI+PD + +L+N GQ A +L ++ K+ P
Sbjct: 739 GLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Query: 120 NTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILING 165
N + ++T+I G + A + HDE+L +GI + + +L++G
Sbjct: 799 NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 34 DAVCLFNRLLQMRH---TPSIIE-FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
D V + L +MR P+ E + ++ VK + A+ + +M GI ++
Sbjct: 289 DLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAA 348
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
L+N YC ++ A + ++ + G P+ + F+ +++ C N ++++A++F+ + +
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
I + V +I G K AAL +
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIF 438
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLN 90
P +AV +F R++ P + F+ + KT +A+ L +M + G+ T
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT 314
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+I + G M A V+ +++ G + I T+L+ G C +++ +AL + + +
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
G+ ++V + +++ CK + A+
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEF 402
Score = 50.4 bits (119), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF+ L ++ P++ +N +++ AI L +M GI D+ T +I+
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
G +++A + +++L G P+ I L+ GL Q +A + +E+ + +
Sbjct: 739 GLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N + Y +I G + G A RL
Sbjct: 799 NVLLYSTVIAGHHREGNLNEAFRL 822
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 84.0 bits (206), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D VC F + M P +I +N ++ K I + +M+ G+ P++V+ + L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +C G M A + + G PN T+T+LI C + A + +E+L G+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V+Y LI+GLC + + A L
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELF 460
Score = 80.1 bits (196), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 67/130 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ K + +M+ PD++T N LINC+C G++ +
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ G KPN ++++TL+ C +++A++F+ ++ G+ N+ +Y LI+ CK
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 414
Query: 169 VGQTRAALRL 178
+G A RL
Sbjct: 415 IGNLSDAFRL 424
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 69/131 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++ P++ +N ++ VK K+ A+ L ++++ RGI PD++ I C
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
L ++ A V+ ++ + G K N++ +TTL+ + L DE+ I++ V
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 158 SYGILINGLCK 168
++ +LI+GLCK
Sbjct: 579 TFCVLIDGLCK 589
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 74/147 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L N +LQ+ +++ + ++ L + A L +M+ G++P++ + N L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + M A +L ++ RG KP+ + + T I GLC ++++ A +E+ GI
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N + Y L++ K G L LL
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLL 565
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 65/147 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ F+++ + R P N +L K M G P + T NI+I
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMI 269
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C C G + A + ++ RG P+T+T+ ++I G ++ + F +E+ +
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 329
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++Y LIN CK G+ L R
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYR 356
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ K+ + + + L +M+ I +VT +LI+ C +S A +I
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 114 KR-GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQT 172
G + N FT +I GLC ++QV+ A ++++ +G+ ++ +Y L++G K G
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 173 RAALRL 178
AL L
Sbjct: 665 LEALAL 670
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 74/130 (56%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S++ + ++ K A+ +M+F G+ D+V LI +C G++ ++
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++L+RG P IT+ TLI+G C Q+K A + + ++ +G++ N +Y LI+GLC V
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 170 GQTRAALRLL 179
G+T+ AL+LL
Sbjct: 331 GKTKEALQLL 340
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 72/141 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV L + + P + +N ++ + K A+ L+++M+ G +VT ILI+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G+M A L ++ G + + + +T+LI+G C ++ R DE+L +G
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 155 NQVSYGILINGLCKVGQTRAA 175
++Y LI G CK+GQ + A
Sbjct: 281 CAITYNTLIRGFCKLGQLKEA 301
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/100 (38%), Positives = 58/100 (58%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
RG P +T N LI +C LGQ+ A + +++RG +PN T+T LI GLC + K
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
ALQ + ++ + + N V+Y I+IN LCK G A+ ++
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Score = 73.2 bits (178), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 47/208 (22%)
Query: 17 LAMPFSSLHSHSRSLPND-------AVCLFNRLLQMRHTPSIIEF--NKILTPLVKTKHY 67
L FS + RSL D AV +F Q + S + F N ++ LV+++++
Sbjct: 32 LVNAFSETETKLRSLCEDSNPQLKNAVSVFQ---QAVDSGSSLAFAGNNLMAKLVRSRNH 88
Query: 68 SIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYK--------- 118
+A S +M + V+L+ L+ CY + + AF VLA +LKRG+
Sbjct: 89 ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 119 --------------------------PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
P+ ++ T+I+G C ++++AL+ +E+ G
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V++GILI+ CK G+ A+ L+
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ L N +++ P+ + +N I+ L K + A+ + M+ R PD +T NIL+
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 94 NCYCHLGQMSVAFSVLAKILKRG--YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
C G + A +L +LK P+ I++ LI GLC +++ +AL +D L+ +
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
++V+ IL+N K G A+ L +
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 72/142 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ +L+ +P I +N ++ K A + M RG+ P++ T LI+ C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+G+ A +L ++++ +PN +T+ +I LC + V A++ + + + + + +
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y IL+ GLC G A +LL
Sbjct: 389 TYNILLGGLCAKGDLDEASKLL 410
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 42 LLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
L +MR + PS+ ++N +L+ L K A L +M+ PD+V+ NI+I+
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
G + A S+L + + G P+ T++ LI + A+ F D+++ G +
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 70/147 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ +++ L++ + N +L +K + A+ L Q+ I+ + T +
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAM 500
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C G ++VA +L K+ +P+ + L+ LC + +A + +E+
Sbjct: 501 IDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ VS+ I+I+G K G ++A LL
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLL 587
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P+ I ++ ++ L A+ L M GI PD VT N++IN +C G++ A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L + K G PN ++ L+ G C +++ A Q DE+ G++L+ V Y L+N C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 168 KVGQTRAALRLL 179
+ G+T A++LL
Sbjct: 350 RNGETDEAMKLL 361
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
Query: 24 LHSHSRSLPNDAVCLFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
L +HSRS +AV LF ++ +P + FN ++ + A + M+ G
Sbjct: 242 LFAHSRS--KEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC 299
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
P++ + L+N +C +G++ A ++ K G K +T+ +TTL+ C N + A++
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ A + + ++Y +++ GL G++ AL++L
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P++ ++ ++ K A +++ G+ D V L+NC+C G+ A
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L ++ + +T+T+ +++GL + + ALQ D+ ++G+ LN+ SY I++N LC
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Query: 168 KVGQTRAALRLL 179
G+ A++ L
Sbjct: 420 CNGELEKAVKFL 431
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 83/145 (57%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + R+ +P+++ ++ ++T L K+ + A H+M+ + I P+++T + LI+
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
Y G++S SV +++ PN T+++LI GLC++++V A++ D ++++G
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+Y L NG K + ++LL
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLL 211
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ + + ++ TP+++ ++ + K+ I L M RG+ + V+ N L
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I Y G++ +A V + G PN ++ ++ GL N +V++AL + +
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ ++Y I+I+G+CK + A L
Sbjct: 290 DLDIITYTIMIHGMCKACMVKEAYDLF 316
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 69/131 (52%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+++++ P I+ + ++ + A+ ++ QME GI D+V ILI+ C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
+ A VL ++ RG PN +T+++LI GLC + ++ A + E+ ++ I N +++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 161 ILINGLCKVGQ 171
LI+ K G+
Sbjct: 123 ALIDAYAKRGK 133
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 52/99 (52%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
GI PDIVT + L+N +C + A V ++ K G K + + T LI LC N V A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
L+ + +GI N V+Y LI GLCK G+ A R L
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL 106
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++ ++QM P++ ++ ++ L AI + M +G P++VT + L N +
Sbjct: 140 VYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFF 199
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ +L + +RG NT++ TLIKG ++ AL + + G+ N
Sbjct: 200 KSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIR 259
Query: 158 SYGILINGLCKVGQTRAAL 176
SY I++ GL G+ AL
Sbjct: 260 SYNIVLAGLFANGEVEKAL 278
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 81.6 bits (200), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L K A + +M +GI PD+ + +LIN + LG M A S+ +++
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ G PN I + L+ G C + ++++A + DE+ +G+ N V+Y +I+G CK G
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 174 AALRLL 179
A RL
Sbjct: 715 EAFRLF 720
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 72/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA +F + P + + ++ K + A S+ +M G+ P+++ N+L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ +C G++ A +L ++ +G PN +T+ T+I G C + + A + DE+ +G+
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ Y L++G C++ A+ +
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 66.6 bits (161), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 65/127 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ + ++ ++ ++ A +M G++P+ V LIN YC G++ A S
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ +G + T+T L+ GL ND+V A + E+ +GI + SYG+LING K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 169 VGQTRAA 175
+G + A
Sbjct: 640 LGNMQKA 646
Score = 60.1 bits (144), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ + +N ++ L K + A L HQM+ +MP ++T L+N Y +G+ + F V
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ-----GIQLNQVSYGILI 163
+ + G +P+ I ++ +I +AL D++ A+ G +L+ + L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 164 NGLCKVGQTRAALRLL 179
+G KVG+ A +++
Sbjct: 923 SGFAKVGEMEVAEKVM 938
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 62/132 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ + ++ ++ + A+ + +M+ +GI PDI N LI +M A S
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++++ G KPN T+ I G + A ++ E+ G+ N+V LIN CK
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 169 VGQTRAALRLLR 180
G+ A R
Sbjct: 570 KGKVIEACSAYR 581
Score = 53.1 bits (126), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 65/145 (44%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF+ ++ P + ++ + K+ L +M+ R I+ T ++
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G + A++++ +++ G +PN + +TTLIK N + A++ E+ QGI
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ Y LI GL K + A L
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFL 510
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 65/147 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ + + + P I +N ++ L K K A S +M G+ P+ T I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + + A + ++ + G PN + T LI C +V A + ++ QGI
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y +L+NGL K + A + R
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFR 616
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP FN ++ K A + ME PD+VT N +I+ C G++ +A +
Sbjct: 206 TPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHN 265
Query: 108 VLAKILKRGYK--PNTITFTTLIKGLCLNDQVKRA-LQFHDELLAQGIQLNQVSYGILIN 164
VL+ +LK+ PN +++TTL++G C+ ++ A L FHD +L++G++ N V+Y LI
Sbjct: 266 VLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD-MLSRGLKPNAVTYNTLIK 324
Query: 165 GLCKV 169
GL +
Sbjct: 325 GLSEA 329
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYS--IAISLSHQMEFRGIMPDIVTLN 90
++AV +F+ +L P+ + +N ++ L + Y I + F PD T N
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFN 357
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
ILI +C G + A V ++L P++ +++ LI+ LC+ ++ RA +EL +
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 151 GIQLNQ-------VSYGILINGLCKVGQTRAALRLLR 180
+ L + +Y + LC G+T+ A ++ R
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFR 454
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
FN ++ + ++ L M+ GI P ++T N L++ G+ +A + ++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 114 KR-GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQT 172
+ G P++ TF TLI G C N V A + ++ + V+Y +I+GLC+ G+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 173 RAA 175
+ A
Sbjct: 261 KIA 263
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 80.9 bits (198), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 77/141 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF++ L ++ F+ + VK+ + A + +M +GI P++VT ILI C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ AF + +ILKRG +P+ +T+++LI G C ++ +++++ G + V
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 158 SYGILINGLCKVGQTRAALRL 178
YG+L++GL K G A+R
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRF 483
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 79/146 (54%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A ++ R+L +P+++ + ++ L + A + Q+ RG+ P IVT + LI+
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G + F++ ++K GY P+ + + L+ GL + A++F ++L Q I+L
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N V + LI+G C++ + AL++ R
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFR 520
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 73/141 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + Q P +I ++ ++ K + L Q +G+ D+V + I+ Y
Sbjct: 308 LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV 367
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G ++ A V ++L +G PN +T+T LIKGLC + ++ A + ++L +G++ + V
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 158 SYGILINGLCKVGQTRAALRL 178
+Y LI+G CK G R+ L
Sbjct: 428 TYSSLIDGFCKCGNLRSGFAL 448
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 73/146 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA FN L++ + P I+ +N ++ + A + ++ P+ VTL ILI
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C M A + + + ++G KPN +T+ L+ + ++ + + +E+ +GI
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ VSY I+I+GLCK G+ A +
Sbjct: 710 PSIVSYSIIIDGLCKRGRVDEATNIF 735
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 29 RSLPNDAVCLFNRLLQM----RHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
+ L D + + +RLL + P+++ F ++ K A L ME RGI P
Sbjct: 260 KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D++ + LI+ Y G + + + ++ L +G K + + F++ I + + A +
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY 379
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+L QGI N V+Y ILI GLC+ G+ A
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P + LF+ + + + + I N ++ L K A + + + PDIVT N
Sbjct: 553 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I YC L ++ A + + + PNT+T T LI LC N+ + A++ + +G
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V+YG L++ K + +L
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
RG IV+ N ++ + Q+ VA +L+ +L G PN +TF TLI G C ++ R
Sbjct: 246 RGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
A + +GI+ + ++Y LI+G K G
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 60/119 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F+ + + P+ + + ++ K+ + L +M+ +GI P IV+ +I+I+
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G++ A ++ + + P+ + + LI+G C ++ A ++ +L G++
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + + +PSI+ ++ I+ L K A ++ HQ ++PD+V ILI YC
Sbjct: 699 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 758
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTI 122
+G++ A + +L+ G KP+ +
Sbjct: 759 KVGRLVEAALLYEHMLRNGVKPDDL 783
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 80.9 bits (198), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 77/141 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF++ L ++ F+ + VK+ + A + +M +GI P++VT ILI C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ AF + +ILKRG +P+ +T+++LI G C ++ +++++ G + V
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 158 SYGILINGLCKVGQTRAALRL 178
YG+L++GL K G A+R
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRF 483
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 79/146 (54%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A ++ R+L +P+++ + ++ L + A + Q+ RG+ P IVT + LI+
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G + F++ ++K GY P+ + + L+ GL + A++F ++L Q I+L
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N V + LI+G C++ + AL++ R
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFR 520
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 73/141 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + Q P +I ++ ++ K + L Q +G+ D+V + I+ Y
Sbjct: 308 LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV 367
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G ++ A V ++L +G PN +T+T LIKGLC + ++ A + ++L +G++ + V
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 158 SYGILINGLCKVGQTRAALRL 178
+Y LI+G CK G R+ L
Sbjct: 428 TYSSLIDGFCKCGNLRSGFAL 448
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 73/146 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA FN L++ + P I+ +N ++ + A + ++ P+ VTL ILI
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C M A + + + ++G KPN +T+ L+ + ++ + + +E+ +GI
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ VSY I+I+GLCK G+ A +
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIF 764
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 29 RSLPNDAVCLFNRLLQM----RHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
+ L D + + +RLL + P+++ F ++ K A L ME RGI P
Sbjct: 260 KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D++ + LI+ Y G + + + ++ L +G K + + F++ I + + A +
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY 379
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+L QGI N V+Y ILI GLC+ G+ A
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P + LF+ + + + + I N ++ L K A + + + PDIVT N
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I YC L ++ A + + + PNT+T T LI LC N+ + A++ + +G
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V+YG L++ K + +L
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 70/142 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ +++M + P ++ + ++ L K A+ S +M + I ++V N LI+ +C
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
L + A V + G KP+ TFTT+++ + +++ AL + G++ + +
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y LI+ CK + L+L
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLF 589
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
RG IV+ N ++ + Q+ VA +L+ +L G PN +TF TLI G C ++ R
Sbjct: 246 RGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
A + +GI+ + ++Y LI+G K G
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 66/146 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF R+ +M P + + ++ K +I + L M+ I DI N++I
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 608
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ ++ A +++ +P+ +T+ T+I G C ++ A + + L
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V+ ILI+ LCK A+R+
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMF 694
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 60/119 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F+ + + P+ + + ++ K+ + L +M+ +GI P IV+ +I+I+
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G++ A ++ + + P+ + + LI+G C ++ A ++ +L G++
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + + +PSI+ ++ I+ L K A ++ HQ ++PD+V ILI YC
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 787
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTI 122
+G++ A + +L+ G KP+ +
Sbjct: 788 KVGRLVEAALLYEHMLRNGVKPDDL 812
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 80.5 bits (197), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R P +A +FN L++ H PS+I + ++T L + KH+ +SL ++E G+ PD +
Sbjct: 332 RGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTIL 391
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N +IN G + A + K+ + G KP TF TLIKG +++ + + D +L
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML 451
Query: 149 A-QGIQLNQVSYGILINGLC 167
+ +Q N + IL+ C
Sbjct: 452 RDEMLQPNDRTCNILVQAWC 471
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 73/147 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ F R+ ++ P++ FN ++ + + ME G+ PD+VT + L+
Sbjct: 549 EALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N + +G M + +L+ G P+ F+ L KG + ++A Q +++ G++
Sbjct: 609 NAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVR 668
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N V Y +I+G C G+ + A+++ +
Sbjct: 669 PNVVIYTQIISGWCSAGEMKKAMQVYK 695
Score = 53.5 bits (127), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS-VLAKILKRGYKPNTITFTTLI 128
A ++ ++M+ G+ PD+VT N L Y +G A ++ ++L KPN T T++
Sbjct: 479 AWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIV 538
Query: 129 KGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
G C +++ AL+F + G+ N + LI G +
Sbjct: 539 NGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNI 579
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 66/139 (47%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
R+L + P++ I+ + A+ ++M+ G+ P++ N LI + ++
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
M V+ + + G KP+ +TF+TL+ +KR + + ++L GI + ++
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 161 ILINGLCKVGQTRAALRLL 179
IL G + G+ A ++L
Sbjct: 641 ILAKGYARAGEPEKAEQIL 659
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 4/150 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM--PDIVTLN 90
+ A+ +F ++ + P+ FN ++ K + L M R M P+ T N
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM-LRDEMLQPNDRTCN 464
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC-LNDQVKRALQFHDELLA 149
IL+ +C+ ++ A++++ K+ G KP+ +TF TL K + +L
Sbjct: 465 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLH 524
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++ N + G ++NG C+ G+ ALR
Sbjct: 525 NKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
F+ + + P I FN +L + + A +L +M R I D+ + N L++ C
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
GQM +AF +LA++ + PN ++++T+I G + AL E+ GI L++V
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
SY L++ KVG++ AL +LR
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILR 468
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF + + + +N +L+ K A+ + +M GI D+VT N L
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ Y G+ V ++ + PN +T++TLI G K A++ E + G+
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + V Y LI+ LCK G +A+ L+
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLI 572
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 65/134 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + R + +N +L + K +A + QM + IMP++V+ + +I+ +
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 420
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+ A ++ ++ G + +++ TL+ + + AL E+ + GI+ + V
Sbjct: 421 KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 158 SYGILINGLCKVGQ 171
+Y L+ G K G+
Sbjct: 481 TYNALLGGYGKQGK 494
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ +N +L K Y + +M+ ++P+++T + LI+ Y G A +
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ G + + + ++ LI LC N V A+ DE+ +GI N V+Y +I+ +
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F + ++ F+ +++ ++ + AIS+ + M+ G+ P++VT N +I+ C
Sbjct: 255 IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-C 313
Query: 98 HLGQMSVAFSVLAKIL----KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
G M F +AK + G +P+ ITF +L+ + A DE+ + I+
Sbjct: 314 GKGGME--FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ SY L++ +CK GQ A +L
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEIL 397
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L N A+ F +++ + P++I F ++ L K A + +M G P++ T
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 325
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRG-YKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
LI+ C G AF + K+++ YKPN T+T++I G C D++ RA +
Sbjct: 326 TALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
QG+ N +Y LING CK G A L+
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELM 416
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
RG +PD T +++ C G ++ A K++ G+KPN I FT+LI GLC +K+
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
A + +E++ G + N ++ LI+GLCK G T A RL
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+AV + + TPS I N +L V+ A ++ +M RG++PD + ++
Sbjct: 164 NEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLM 223
Query: 93 -INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
I C+ G++ A L +++RG+ P+ T T ++ LC N V RA+ + +++ G
Sbjct: 224 VIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N +++ LI+GLCK G + A +L
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLE 311
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 29 RSLPNDAVCLFNRLLQMR-HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
R A LF +L++ + P++ + ++ K + A L +M+ +G+ P++
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T LIN +C G A+ ++ + G+ PN T+ I LC + A + ++
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ G++ + V+Y ILI CK AL
Sbjct: 455 FSCGLEADGVTYTILIQEQCKQNDINQAL 483
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LF+R+ + P++ + ++ K + A L + M G MP+I T N
Sbjct: 375 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A+ +L K G + + +T+T LI+ C + + +AL F + G
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + ILI C+ + + + RL +
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQ 522
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
++Q P ILT L + + AI +M G P+++ LI+ C G
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL-AQGIQLNQVSYG 160
+ AF +L ++++ G+KPN T T LI GLC ++A + +L+ + + N +Y
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 161 ILINGLCK 168
+I G CK
Sbjct: 363 SMIGGYCK 370
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G++P T +I+CYC G + +A + + G P++ T+ +LI GLC V A
Sbjct: 528 GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++ ++ +G+ +V+ L CK + A+ LL
Sbjct: 588 CKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 63/150 (42%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+S +A L N+ + + ++ K + A++ +M G D+
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRL 500
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
NILI +C +M + + ++ G P T+T++I C + AL++ +
Sbjct: 501 NNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMK 560
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRL 178
G + +YG LI+GLCK A +L
Sbjct: 561 RHGCVPDSFTYGSLISGLCKKSMVDEACKL 590
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 72/131 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ VK+ A+ +M PD+ T NILIN YC + +A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ ++G +PN ++F TLI+G + +++ ++ E++ G + ++ + IL++GLC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 169 VGQTRAALRLL 179
G+ A L+
Sbjct: 311 EGRVDDACGLV 321
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 73/148 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ + R+ + R P + FN ++ ++ + +A+ L +M+ +G P++V+ N L
Sbjct: 210 DKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTL 269
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I + G++ + ++++ G + + T L+ GLC +V A +LL + +
Sbjct: 270 IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV 329
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
++ YG L+ LC + A+ ++
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMME 357
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 69/141 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LF + + P+++ FN ++ + + + ++++M G T IL++
Sbjct: 247 ALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVD 306
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G++ A ++ +L + P+ + +L++ LC ++ RA++ +EL +G
Sbjct: 307 GLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 155 NQVSYGILINGLCKVGQTRAA 175
++ L+ GL K G+T A
Sbjct: 367 CFIACTTLVEGLRKSGRTEKA 387
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 65/143 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA L LL R PS ++ ++ L A+ + ++ +G P + L
Sbjct: 315 DDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTL 374
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ G+ A + K++ G P+++TF L++ LC +D A + ++G
Sbjct: 375 VEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGY 434
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ ++ +Y +L++G K G+ +
Sbjct: 435 EPDETTYHVLVSGFTKEGRRKEG 457
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + L + TP I ++ L K+ A +M GI+PD VT N+L+
Sbjct: 352 AMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLR 411
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C + A + +GY+P+ T+ L+ G + K +E+L + +
Sbjct: 412 DLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Query: 155 NQVSYGILINGLCKVGQ-TRAALRLL 179
+ +Y L++GL G+ +R +R+L
Sbjct: 472 DIFTYNRLMDGLSCTGKFSRKQVRML 497
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 80.1 bits (196), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 73/132 (55%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++I +N ++ A+SL ++ RG+ P +VT NIL++ +C G S A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ +RG KP+ +T+T LI +D +++A+Q + G+ + +Y +LI+G C
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 169 VGQTRAALRLLR 180
GQ A RL +
Sbjct: 456 KGQMNEASRLFK 467
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 72/132 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ L K A + +M RG+ +IVT N LI C +++ A V
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ G PN IT+ TLI G C ++ +AL +L ++G+ + V+Y IL++G C+
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 169 VGQTRAALRLLR 180
G T A ++++
Sbjct: 386 KGDTSGAAKMVK 397
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 69/133 (51%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+PS++ +N +++ + S A + +ME RGI P VT ILI+ + M A
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ + + G P+ T++ LI G C+ Q+ A + ++ + + N+V Y +I G C
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 168 KVGQTRAALRLLR 180
K G + AL+LL+
Sbjct: 490 KEGSSYRALKLLK 502
Score = 74.3 bits (181), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 61/108 (56%)
Query: 73 LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
+ +M+ G+ P++ T N ++N C G+ AF V ++ +RG N +T+ TLI GLC
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ A + D++ + GI N ++Y LI+G C VG+ AL L R
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Score = 73.2 bits (178), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 77/145 (53%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA +F+ + + + +I+ +N ++ L + + A + QM+ GI P+++T N LI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C +G++ A S+ + RG P+ +T+ L+ G C A + E+ +GI+
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
++V+Y ILI+ + A++L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQL 430
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 71/131 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS + + ++ ++ + AI L ME G++PD+ T ++LI+ +C GQM+ A +
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++++ +PN + + T+I G C RAL+ E+ + + N SY +I LCK
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 169 VGQTRAALRLL 179
+++ A RL+
Sbjct: 526 ERKSKEAERLV 536
Score = 70.9 bits (172), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 25 HSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
+ S+SL N ++ FN ++ P FN +LT +V + ++ S ++ + + ++
Sbjct: 104 YVQSQSL-NLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVL- 161
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D+ + ILI C G++ +F +L ++ + G+ PN + +TTLI G C ++++A
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
E+ G+ N+ +Y +LINGL K G + +
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 61/131 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L L + +P+++ + ++ K A L +M G++ + T +LIN
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G F + K+ + G PN T+ ++ LC + + K A Q DE+ +G+ N V
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 158 SYGILINGLCK 168
+Y LI GLC+
Sbjct: 305 TYNTLIGGLCR 315
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P ++ + +++ K A SL M GI P VT N+L++ Y G+M A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ K++ G P+ +TFT+LI G C QV + + +E+ A+G+ N +Y ILIN LC
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 168 KVGQTRAALRLL 179
+ A LL
Sbjct: 394 NENRLLKARELL 405
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L + +L++ P+ + FN ++ K A + +M G PD+VT LI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC +GQ+S F + ++ RG PN T++ LI LC +++ +A + +L ++ I
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 154 LNQVSYGILINGLCKVGQTRAA 175
Y +I+G CK G+ A
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEA 436
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA+ LF+ L+ + FN ++ L A+ L M G PDIVT N L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 93 INCYCHLGQMSVAFSVLAKILKRGY--KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
I +C +++ A S + K +K G P+ +T+T++I G C +++ A D++L
Sbjct: 248 IQGFCKSNELNKA-SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 151 GIQLNQVSYGILINGLCKVGQTRAA 175
GI V++ +L++G K G+ A
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTA 331
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 55 NKILTPLVKTKHYSIAISL-SHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
N +L LVK A+ L + F+ D T NILI C +G+ A +L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSC-NDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQ-FHDELLAQGIQLNQVSYGILINGLCKVGQT 172
G +P+ +T+ TLI+G C ++++ +A + F D + V+Y +I+G CK G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 173 RAALRLL 179
R A LL
Sbjct: 294 REASSLL 300
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ F ++ + S L +M RG+ P+ T +ILIN C+ ++ A +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ + P + +I G C +V A +E+ + + +++++ ILI G C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 169 VGQTRAALRLL 179
G+ A+ +
Sbjct: 465 KGRMFEAVSIF 475
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 66/130 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ ++ ++ L A L Q+ + I+P N +I+ +C G+++ A +
Sbjct: 380 PNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ K+ KP+ ITFT LI G C+ ++ A+ +++A G ++++ L++ L K
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 169 VGQTRAALRL 178
G + A L
Sbjct: 500 AGMAKEAYHL 509
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+A+C NRLL+ R P +N ++ K + A + +ME +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD +T ILI +C G+M A S+ K++ G P+ IT ++L+ L K A +
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA--Y 507
Query: 144 HDELLAQGIQLNQV 157
H +A+ Q N V
Sbjct: 508 HLNQIARKGQSNNV 521
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P ++ + +++ K A SL M GI P VT N+L++ Y G+M A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ K++ G P+ +TFT+LI G C QV + + +E+ A+G+ N +Y ILIN LC
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 168 KVGQTRAALRLL 179
+ A LL
Sbjct: 394 NENRLLKARELL 405
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L + +L++ P+ + FN ++ K A + +M G PD+VT LI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC +GQ+S F + ++ RG PN T++ LI LC +++ +A + +L ++ I
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 154 LNQVSYGILINGLCKVGQTRAA 175
Y +I+G CK G+ A
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEA 436
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA+ LF+ L+ + FN ++ L A+ L M G PDIVT N L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 93 INCYCHLGQMSVAFSVLAKILKRGY--KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
I +C +++ A S + K +K G P+ +T+T++I G C +++ A D++L
Sbjct: 248 IQGFCKSNELNKA-SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 151 GIQLNQVSYGILINGLCKVGQTRAA 175
GI V++ +L++G K G+ A
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTA 331
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 55 NKILTPLVKTKHYSIAISL-SHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
N +L LVK A+ L + F+ D T NILI C +G+ A +L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSC-NDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQ-FHDELLAQGIQLNQVSYGILINGLCKVGQT 172
G +P+ +T+ TLI+G C ++++ +A + F D + V+Y +I+G CK G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 173 RAALRLL 179
R A LL
Sbjct: 294 REASSLL 300
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ F ++ + S L +M RG+ P+ T +ILIN C+ ++ A +
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ + P + +I G C +V A +E+ + + +++++ ILI G C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 169 VGQTRAALRLL 179
G+ A+ +
Sbjct: 465 KGRMFEAVSIF 475
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 66/130 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ ++ ++ L A L Q+ + I+P N +I+ +C G+++ A +
Sbjct: 380 PNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ K+ KP+ ITFT LI G C+ ++ A+ +++A G ++++ L++ L K
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 169 VGQTRAALRL 178
G + A L
Sbjct: 500 AGMAKEAYHL 509
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+A+C NRLL+ R P +N ++ K + A + +ME +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD +T ILI +C G+M A S+ K++ G P+ IT ++L+ L K A +
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA--Y 507
Query: 144 HDELLAQGIQLNQV 157
H +A+ Q N V
Sbjct: 508 HLNQIARKGQSNNV 521
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R + DAV + + + +P+ +N+++ K+ + A+ + ++M R ++PD+VT
Sbjct: 406 RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVT 464
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N LI+ C G A+ +L+ + RG P+ T+T++I LC + +V+ A D L
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G+ N V Y LI+G CK G+ A +L
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Score = 70.5 bits (171), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 80/155 (51%)
Query: 24 LHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
+ + +S + A+ + N++L+ + P ++ +N ++ ++ ++ A L M RG++
Sbjct: 435 IKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD T +I+ C ++ A + + ++G PN + +T LI G C +V A
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+++L++ N +++ LI+GLC G+ + A L
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 41 RLLQMRH----TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
RLL + + P + ++ L K+K A L +E +G+ P++V LI+ Y
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
C G++ A +L K+L + PN++TF LI GLC + ++K A ++++ G+Q
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 157 VSYGILINGLCKVG 170
+ ILI+ L K G
Sbjct: 603 STDTILIHRLLKDG 616
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF ++ P++ + ++ L ++ S A++L +ME GI P+I T +L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C + A +L ++L++G PN IT+ LI G C ++ A+ + + ++ +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 153 QLNQVSYGILINGLCKVGQTRA 174
N +Y LI G CK +A
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKA 446
Score = 67.4 bits (163), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
+ P+I T N ++N YC LG + A ++KI++ G P+ T+T+LI G C + A
Sbjct: 214 VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +E+ +G + N+V+Y LI+GLC + A+ L
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLF 311
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 63/125 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ L + A+ L +M+ P + T +LI C + S A +++ +
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ + G KPN T+T LI LC + ++A + ++L +G+ N ++Y LING CK G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 172 TRAAL 176
A+
Sbjct: 409 IEDAV 413
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 67/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A + ++L P+ + FN ++ L A L +M G+ P + T IL
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G A+S ++L G KP+ T+TT I+ C ++ A ++ G+
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y LI G +GQT A +L+
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 66/143 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++ +L+ + P+I +NK++ K + A ++ G+ PD T LI YC
Sbjct: 205 VYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYC 264
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ AF V ++ +G + N + +T LI GLC+ ++ A+ ++
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y +LI LC + AL L++
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVK 347
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 63/138 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+ L Q P+++ + ++ K A + +M + +P+ +T N LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C G++ A + K++K G +P T T LI L + A ++L+ G +
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 154 LNQVSYGILINGLCKVGQ 171
+ +Y I C+ G+
Sbjct: 635 PDAHTYTTFIQTYCREGR 652
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 63/136 (46%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L +++++ P++ ++ L+K + A S QM G PD T I
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
YC G++ A ++AK+ + G P+ T+++LIKG Q A + G +
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 154 LNQVSYGILINGLCKV 169
+Q ++ LI L ++
Sbjct: 705 PSQHTFLSLIKHLLEM 720
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISL-SHQMEFRGIMPDIVTLNI 91
+ V L ++++ TP+ + K++ + + + +A + H GI P + N
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L++C C L + + A V+ ++ G+ P + LI GL + +R LL G
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+++++ I+I+G+ K G A L
Sbjct: 862 YYEDELAWKIIIDGVGKQGLVEAFYELF 889
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 70/129 (54%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S + + ++ K + A L +M +G+ P+ +T N++I YC G++ A +
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
A + G P++ T+T+LI G C+ D V A++ E+ +G+ N V+Y ++I+GL K
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 170 GQTRAALRL 178
G++ A L
Sbjct: 588 GKSDEAFGL 596
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 69/131 (52%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +N I+ VK + +S + M+ G++ + VT +L+ G+MS A +
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ +RG + + +T+LI C +KRA DEL +G+ + +YG LI+G+CK
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 169 VGQTRAALRLL 179
VG+ AA L+
Sbjct: 377 VGEMGAAEILM 387
Score = 63.9 bits (154), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 52 IEFNKILTPL-----VKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
+ +NK+ L VK S A L +M RGI D+ LI+ C G M AF
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+ ++ ++G P++ T+ LI G+C ++ A +E+ ++G+ + QV + LI+G
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 167 CKVGQTRAA 175
C+ G A
Sbjct: 410 CRKGMVDEA 418
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 57/102 (55%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
ME +G D+ T N + +C+ L + A L ++++ G K +T+++T LI C
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
V+ A + E+ ++G+Q N ++Y ++I CK G+ + A +L
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 67/151 (44%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+ + ++A +++ + Q + N I + + K Y A +M G+ V+
Sbjct: 412 KGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVS 471
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
LI+ YC G + A + ++ +G +PN IT+ +I C ++K A + +
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
A G+ + +Y LI+G C A+RL
Sbjct: 532 ANGMDPDSYTYTSLIHGECIADNVDEAMRLF 562
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF+ L + +PS + ++ + K A L ++M+ +G+ V N LI+
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR---ALQFHDELLAQG 151
YC G + A + + ++G++ + T T+ C N ++KR A Q+ ++ G
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS--CFN-RLKRYDEAKQWLFRMMEGG 464
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
++L+ VSY LI+ CK G A RL
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 53/118 (44%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ I +N ++ K A L ME G+ PD T LI+ C + A +
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRL 561
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+++ +G N++T+T +I GL + A +DE+ +G ++ Y LI +
Sbjct: 562 FSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ FN + ++ +ME G PD+VT N L++ YC G++ AF +
Sbjct: 234 PNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYL 293
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +R P+ +T+T+LIKGLC + +V+ A Q ++ +GI+ + +SY LI CK
Sbjct: 294 YKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCK 353
Query: 169 VGQTRAALRLL 179
G + + +LL
Sbjct: 354 EGMMQQSKKLL 364
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
GI P+ T NIL N +C+ L K+ + G++P+ +T+ TL+ C ++K A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+ + + + + V+Y LI GLCK G+ R A
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 65/131 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N +++ + A L M R ++PD+VT LI C G++ A
Sbjct: 269 PDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQT 328
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++ RG KP+ +++ TLI C ++++ + E+L + ++ + +++ G +
Sbjct: 329 FHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVR 388
Query: 169 VGQTRAALRLL 179
G+ +A+ +
Sbjct: 389 EGRLLSAVNFV 399
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 66/146 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L+ + + R P ++ + ++ L K A H+M RGI PD ++ N LI
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI 348
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
YC G M + +L ++L P+ T +++G ++ A+ F EL +
Sbjct: 349 YAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVD 408
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ LI LC+ G+ AA LL
Sbjct: 409 IPFEVCDFLIVSLCQEGKPFAAKHLL 434
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
FN + ++ TP+++ + ++ +K K S A L M G +P+IVT + LI+ +C
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 99 LGQMSVAFSVLAKIL----------------KRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
GQ+ A + ++ +PN +T+ L+ G C + +V+ A +
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
D + +G + NQ+ Y LI+GLCKVG+ A
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++K+L L +A L +M+ G++ D+ T I+++ +C G + A
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ + G PN +T+T LI +V A + + +L++G N V+Y LI+G CK
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 169 VGQTRAALRLL 179
GQ A ++
Sbjct: 601 AGQVEKACQIF 611
Score = 67.0 bits (162), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 6/157 (3%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
SL +A+ NR+ P+++ ++ +L + K + + M G P
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC-----LN-DQVKRALQF 143
N L++ YC G S A+ +L K++K G+ P + + LI +C LN D + A +
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ E+LA G+ LN+++ LC G+ A ++R
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 68/130 (52%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ ++ ++ K K +A + +M P++V +I+ C +G+ A+ ++
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+ ++G +PN +T+T +I G + +++ L+ + + ++G+ N V+Y +LI+ CK
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 170 GQTRAALRLL 179
G A LL
Sbjct: 828 GALDVAHNLL 837
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ I ++ ++ L K A + +M G + T + LI+ Y + + +A V
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L+K+L+ PN + +T +I GLC + A + + +G Q N V+Y +I+G
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 169 VGQTRAALRLL 179
+G+ L LL
Sbjct: 792 IGKIETCLELL 802
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKH------YSIAISLSHQMEFRGIMPDIVTLNI 91
L ++++ H P + +N ++ + K +A +M G++ + + ++
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
C C G+ AFSV+ +++ +G+ P+T T++ ++ LC +++ A +E+ G
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 152 IQLNQVSYGILINGLCKVGQTRAA 175
+ + +Y I+++ CK G A
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQA 537
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
S+ +P D F + P+++ + +L K+ A L M G P+ +
Sbjct: 617 SKDVP-DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+ LI+ C +G++ A V ++ + G+ T+++LI + A + ++
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
L N V Y +I+GLCKVG+T A +L++
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 61/131 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ +++L+ P+++ + +++ L K A L ME +G P++VT +I+ +
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+G++ +L ++ +G PN +T+ LI C N + A +E+ +
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 158 SYGILINGLCK 168
Y +I G K
Sbjct: 851 GYRKVIEGFNK 861
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
LN+L+ +C G S+A L ++ ++P+ T+ LI+ D++ A H E+
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++++ + LCKVG+ R AL L+
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLV 293
Score = 47.0 bits (110), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
RL R PS +N ++ +K A + +M + D TL C +G
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 284
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
+ A +++ + P+T+ +T LI GLC + A+ F + + A N V+Y
Sbjct: 285 KWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYS 341
Query: 161 ILINGLCKVGQTRAALRLL 179
L+ G Q R+L
Sbjct: 342 TLLCGCLNKKQLGRCKRVL 360
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 69/129 (53%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I + ++ L K A+ L ++M GI PDIVT + LIN +C +G+ A ++ +
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
I + G PN I ++TLI C +K A++ ++ ++ +G + ++ +L+ LCK G+
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 172 TRAALRLLR 180
A +R
Sbjct: 564 VAEAEEFMR 572
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L N +L +P+ + FN ++ + ++ A+ + + ME +G+ P V+ +L++ C
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ +A ++ + G IT+T +I GLC N + A+ +E+ GI + V
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y LING CKVG+ + A ++
Sbjct: 480 TYSALINGFCKVGRFKTAKEIV 501
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D++ +F + PS+ N IL +VK+ S +M R I PD+ T NILI
Sbjct: 181 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILI 240
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C G + ++ K+ K GY P +T+ T++ C + K A++ D + ++G+
Sbjct: 241 NVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD 300
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y +LI+ LC+ + LLR
Sbjct: 301 ADVCTYNMLIHDLCRSNRIAKGYLLLR 327
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ ++ ++ HT FN ++T L K + A M GI+P+ V+ + LI
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N Y + G+ AFSV ++ K G+ P T+ +L+KGLC ++ A +F L A
Sbjct: 591 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 650
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++ V Y L+ +CK G A+ L
Sbjct: 651 VDTVMYNTLLTAMCKSGNLAKAVSLF 676
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 75/142 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L ++ + + P+I+ +N +L K + AI L M+ +G+ D+ T N+LI+ C
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 314
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+++ + +L + KR PN +T+ TLI G +V A Q +E+L+ G+ N V
Sbjct: 315 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 374
Query: 158 SYGILINGLCKVGQTRAALRLL 179
++ LI+G G + AL++
Sbjct: 375 TFNALIDGHISEGNFKEALKMF 396
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 8 WFHRNPTFLLAMPFSSLHSHSRSLPNDA-VCLFNRLLQMRHTPSIIEFNKILTPLVKTKH 66
W+ + F A+ L H +S DA VC +N L+ L ++
Sbjct: 277 WYCKKGRFKAAIE---LLDHMKSKGVDADVCTYNMLIH---------------DLCRSNR 318
Query: 67 YSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTT 126
+ L M R I P+ VT N LIN + + G++ +A +L ++L G PN +TF
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 127 LIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
LI G K AL+ + A+G+ ++VSYG+L++GLCK
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 420
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A +F+ + ++ H P+ + +L L K H A + D V N L+
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G ++ A S+ ++++R P++ T+T+LI GLC + A+ F E A+G L
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 155 -NQVSYGILINGLCKVGQTRAAL 176
N+V Y ++G+ K GQ +A +
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGI 744
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
+L+ + P + FN ++ L + + L +ME G P IVT N +++ YC G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
+ A +L + +G + T+ LI LC ++++ + ++ + I N+V+Y
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 161 ILINGLCKVGQTRAALRLL 179
LING G+ A +LL
Sbjct: 343 TLINGFSNEGKVLIASQLL 361
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TPS + + +L L K + +A +M+ G+ +T +I+ C G + A
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L ++ K G P+ +T++ LI G C + K A + + G+ N + Y LI C
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 168 KVGQTRAALRL 178
++G + A+R+
Sbjct: 525 RMGCLKEAIRI 535
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
R+ ++ +P+ I ++ ++ + AI + M G D T N+L+ C G
Sbjct: 503 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
+++ A + + G PNT++F LI G + + +A DE+ G +YG
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622
Query: 161 ILINGLCKVGQTRAALRLLR 180
L+ GLCK G R A + L+
Sbjct: 623 SLLKGLCKGGHLREAEKFLK 642
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 69/137 (50%)
Query: 44 QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS 103
+ HTP I+ N ++ + L +M + P++ T NIL++ Y +S
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811
Query: 104 VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
+F + I+ G P+ +T +L+ G+C ++ ++ L+ + +G+++++ ++ +LI
Sbjct: 812 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 871
Query: 164 NGLCKVGQTRAALRLLR 180
+ C G+ A L++
Sbjct: 872 SKCCANGEINWAFDLVK 888
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 38 LFNRLLQMRHT--PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
LF + + R P+ + + + + K + I QM+ G PDIVT N +I+
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
Y +G++ +L ++ + PN T+ L+ G V + + ++ GI +
Sbjct: 769 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Query: 156 QVSYGILINGLCKVGQTRAALRLLR 180
+++ L+ G+C+ L++L+
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKILK 853
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
++A L +L+M+ P+I F ++ K + A+ L M G+ D+V+ N+
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1044
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
LI C G M++AF + ++ G+ N T+ LI+GL
Sbjct: 1045 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 35/163 (21%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N +L K K S + L + GI+PD +T + L+ C + + +
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL--------------------------- 141
L + RG + + TF LI C N ++ A
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 142 --QFHD------ELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+F + E+ QGI Y LINGLC+VG + A
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P ++ ++ L + A + +M I P V + ++ G+ A
Sbjct: 931 SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 990
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L +LK P +FTTL+ C N V AL+ + G++L+ VSY +LI GLC
Sbjct: 991 LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1050
Query: 168 KVGQTRAALRL 178
G A L
Sbjct: 1051 AKGDMALAFEL 1061
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 32 PN--DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
PN D+ L+ H P++ ++L L K AI + M GI+PD
Sbjct: 85 PNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAY 144
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH----- 144
L+N C G + A ++ K+ GY NT+T+ L++GLC+ + ++LQF
Sbjct: 145 TYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQ 204
Query: 145 ------------------------------DELLAQGIQLNQVSYGILINGLCKVGQTRA 174
DE++ +G + N VSY +L+ G CK G+T
Sbjct: 205 KGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDD 264
Query: 175 ALRLLR 180
A+ L R
Sbjct: 265 AMALFR 270
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 77/148 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N ++ RL+Q P+ ++ +L K + A+ L ++ +G P++V+ N+L
Sbjct: 193 NQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVL 252
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ +C G+ A ++ ++ +G+K N +++ L++ LC + + + A E+
Sbjct: 253 LTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDR 312
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y ILIN L G+T AL++L+
Sbjct: 313 APSVVTYNILINSLAFHGRTEQALQVLK 340
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L + ++ P+++ +N +LT K A++L ++ +G ++V+ NIL
Sbjct: 228 DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNIL 287
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG- 151
+ C C G+ A S+LA++ P+ +T+ LI L + + ++ALQ E +++G
Sbjct: 288 LRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE-MSKGN 346
Query: 152 --IQLNQVSYGILINGLCKVGQTRAALRLL 179
++ SY +I LCK G+ ++ L
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCL 376
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 77.8 bits (190), Expect = 4e-15, Method: Composition-based stats.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 12/157 (7%)
Query: 15 FLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSII-EFNKILTPLVKTKHYSIAISL 73
F L + L+ +R+L A+C F + R S+I +FN + LV H +++
Sbjct: 65 FRLYLSCERLYGAARTL--SAMCTFGVVPDSRLWNSLIHQFN--VNGLV---HDQVSLIY 117
Query: 74 SHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCL 133
S +M G+ PD+ LN+LI+ +C +G++S A S+L R +T+T+ T+I GLC
Sbjct: 118 S-KMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCE 173
Query: 134 NDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+ A QF E++ GI + VSY LI+G CKVG
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 210
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 68/143 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + +M P+ + + ++ L K Y A++L QM RGI D+V +L++
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A +L+ PN +T+T L+ GLC + A ++L + + N V
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y +ING K G A+ LLR
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLR 423
Score = 63.9 bits (154), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 65/125 (52%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N ++ L K A + ME RG +PD VT N L++ Y + A S + ++
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ G PN T+ T+I+GL +K ++ E+ ++G++ + +Y LI+G K+G +
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 800
Query: 174 AALRL 178
++ +
Sbjct: 801 GSMTI 805
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 72/142 (50%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
F LL+ P+++ + ++ L K S A + QM + ++P++VT + +IN Y
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
G + A S+L K+ + PN T+ T+I GL + + A++ E+ G++ N
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 159 YGILINGLCKVGQTRAALRLLR 180
L+N L ++G+ + L++
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVK 493
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I FN ++ K + L +M+ GI P +++ NI++ C G+M A +
Sbjct: 571 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 630
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +++ PN T+ + + + + H+ LL+ GI+L++ Y LI LCK
Sbjct: 631 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690
Query: 169 VGQTRAA 175
+G T+ A
Sbjct: 691 LGMTKKA 697
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 51 IIEFNKILTPLVKTKHYSI-AISLSHQ-MEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
I E N I ++ + +Y++ AI +++ M G PD+VT + +IN C G++ +
Sbjct: 222 ISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ + PN +T+TTL+ L + + AL + +++ +GI ++ V Y +L++GL K
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 169 VGQTRAALRLLR 180
G R A + +
Sbjct: 342 AGDLREAEKTFK 353
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ + N+++ M P++ + L K K + GI N LI
Sbjct: 626 EAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLI 685
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C LG A V+ + RG+ P+T+TF +L+ G + V++AL + ++ GI
Sbjct: 686 ATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS 745
Query: 154 LNQVSYGILINGLCKVG 170
N +Y +I GL G
Sbjct: 746 PNVATYNTIIRGLSDAG 762
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Query: 31 LPNDAVCL-FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L +D V L +++++ +P + N ++ K S AISL + R I D VT
Sbjct: 108 LVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTY 164
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N +I+ C G A+ L++++K G P+T+++ TLI G C RA DE+
Sbjct: 165 NTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI-- 222
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALR 177
+LN +++ IL++ + A R
Sbjct: 223 --SELNLITHTILLSSYYNLHAIEEAYR 248
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + FN ++ H A+S M GI P++ T N +I G +
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L+++ RG +P+ T+ LI G +K ++ + E++A G+ +Y +LI+
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 169 VGQTRAALRLLR 180
VG+ A LL+
Sbjct: 831 VGKMLQARELLK 842
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 26 SHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
SH R A+ ++ +++ +P++ +N I+ L +M+ RG+ PD
Sbjct: 727 SHVRK----ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 782
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
T N LI+ +G M + ++ +++ G P T T+ LI ++ +A +
Sbjct: 783 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 842
Query: 146 ELLAQGIQLNQVSYGILINGLCKV 169
E+ +G+ N +Y +I+GLCK+
Sbjct: 843 EMGKRGVSPNTSTYCTMISGLCKL 866
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 71/146 (48%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+ + +AV L ++ P+ + ++ L K +AI LS +M G+ +
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
L+ L+N +G++ ++ ++ +G + I +T+LI + AL + +E+
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRA 174
+G+ + VSY +LI+G+ K G+ A
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKVGA 557
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L ++A + +++M P + +N ++ K ++ A +L ++ +++T
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELNLITHT 231
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ Y +L + A+ ++ G+ P+ +TF+++I LC +V E+
Sbjct: 232 ILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEM 288
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
+ N V+Y L++ L K R AL L
Sbjct: 289 SVYPNHVTYTTLVDSLFKANIYRHALAL 316
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 76/141 (53%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++ + +P I +N ++ + AI++ ++E PDI++ N LINC
Sbjct: 464 LFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG 523
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A ++ ++G P+ +T++TL++ ++V+ A +E+L +G Q N V
Sbjct: 524 KNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIV 583
Query: 158 SYGILINGLCKVGQTRAALRL 178
+Y IL++ L K G+T A+ L
Sbjct: 584 TYNILLDCLEKNGRTAEAVDL 604
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 71/130 (54%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ +F L + P II +N ++ L K A +M+ +G+ PD+VT + L
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C+ ++ +A+S+ ++L +G +PN +T+ L+ L N + A+ + ++ QG+
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 153 QLNQVSYGIL 162
+ ++Y +L
Sbjct: 614 TPDSITYTVL 623
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 6/148 (4%)
Query: 24 LHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
L S S D C R H I +N +L L K + A + M+ R
Sbjct: 214 LRSRDYSKAFDVYCEIRR---GGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCR 267
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
D T I+I +G+ A + +++ G N + + TL++ L V +A+Q
Sbjct: 268 RDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQV 327
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQ 171
++ G + N+ +Y +L+N L GQ
Sbjct: 328 FSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 77.0 bits (188), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 76/147 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA LF+ +L R PS+I +N ++ K + + + +M+ I P ++T N L
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ G + A +VL ++ G+ P+ TF+ L G N++ + AL ++ + G+
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
++N + IL+N LCK G+ A +L
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEIL 377
Score = 77.0 bits (188), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 67/132 (50%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+PS+ +N ++ + + + +ME G MP++V+ LINC C ++ A
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
V + RG P + LI G C +++ A +F E+L +GI+LN V+Y LI+GL
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 168 KVGQTRAALRLL 179
G+ A LL
Sbjct: 576 MTGKLSEAEDLL 587
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS+I FN +L L K A ++ +M+ G +PD T +IL + Y + A V
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ G K N T + L+ LC ++++A + +A+G+ N+V Y +I+G C+
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 169 VGQTRAA 175
G A
Sbjct: 402 KGDLVGA 408
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 66/130 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ + ++ L K A + ME RG+ P + N+LI+ C G++ AF
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++LK+G + N +T+ TLI GL + ++ A E+ +G++ + +Y LI+G
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 169 VGQTRAALRL 178
G + + L
Sbjct: 612 AGNVQRCIAL 621
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 69/143 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +L+ PS + K + VK + L ++M+ I P + N+LI+ C
Sbjct: 166 VFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLC 225
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+M+ A + ++L R P+ IT+ TLI G C +++ + + + A I+ + +
Sbjct: 226 KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLI 285
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
++ L+ GL K G A +L+
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLK 308
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 46/92 (50%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
ME +G+ PD + N LI +C LG+M A + K+ +G P+ T+ LI G +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ E+ G N VSYG LIN LCK
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 62/123 (50%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P + +N ++ A S +M +GI ++VT N LI+ G++S A
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L +I ++G KP+ T+ +LI G V+R + ++E+ GI+ +Y +LI+
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT 645
Query: 168 KVG 170
K G
Sbjct: 646 KEG 648
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 70/129 (54%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ + S A+ L + M G+ P++VT N LI+ +C ++ A V +
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ PNT+T+ TLI G + A +F+++++ GIQ + ++Y LI GLCK +
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 172 TRAALRLLR 180
TR A + ++
Sbjct: 394 TRKAAQFVK 402
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + + + + +P+ N +++ ++ I L ME G V+ N LI
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G +S A + + K G +PN +TF TLI G C +++ A + E+ A +
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N V+Y LING + G A R
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRF 365
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 24 LHSHSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+H R++ +A +F + + P+ + +N ++ + + +A M GI
Sbjct: 315 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI 374
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
DI+T N LI C + A + ++ K PN+ TF+ LI G C+ R +
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++ G N+ ++ +L++ C+ A ++LR
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 67/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ N ++ L+ IA+ +M I P+ TLN++++ YC G++ +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + + G++ +++ TLI G C + AL+ + + G+Q N V++ LI+G C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 169 VGQTRAALRLL 179
+ + A ++
Sbjct: 321 AMKLQEASKVF 331
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
+ L + A+ L N + + P+++ FN ++ + A + +M+ + P+ V
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T N LIN Y G +AF ++ G + + +T+ LI GLC + ++A QF EL
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 148 LAQGIQLNQVSYGILINGLC 167
+ + N ++ LI G C
Sbjct: 405 DKENLVPNSSTFSALIMGQC 424
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP + F+ + K + A QM+ G +P + + N ++ G++ +A
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
++ + PN T ++ G C + ++ + ++ ++ G + VSY LI G C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 168 KVGQTRAALRL 178
+ G +AL+L
Sbjct: 285 EKGLLSSALKL 295
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
I+ +N ++ L K A +++ ++P+ T + LI C F +
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELY 436
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ G PN TF L+ C N+ A Q E++ + I L+ + + NGL
Sbjct: 437 KSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQ 496
Query: 170 GQTRAALRLLR 180
G+ + +LL+
Sbjct: 497 GKDQLVKKLLQ 507
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 70/129 (54%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ +N ++ + S A+ L + M G+ P++VT N LI+ +C ++ A V +
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ PNT+T+ TLI G + A +F+++++ GIQ + ++Y LI GLCK +
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 172 TRAALRLLR 180
TR A + ++
Sbjct: 394 TRKAAQFVK 402
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + + + + +P+ N +++ ++ I L ME G V+ N LI
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G +S A + + K G +PN +TF TLI G C +++ A + E+ A +
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N V+Y LING + G A R
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRF 365
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 24 LHSHSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+H R++ +A +F + + P+ + +N ++ + + +A M GI
Sbjct: 315 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI 374
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
DI+T N LI C + A + ++ K PN+ TF+ LI G C+ R +
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++ G N+ ++ +L++ C+ A ++LR
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 67/131 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ N ++ L+ IA+ +M I P+ TLN++++ YC G++ +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + + G++ +++ TLI G C + AL+ + + G+Q N V++ LI+G C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 169 VGQTRAALRLL 179
+ + A ++
Sbjct: 321 AMKLQEASKVF 331
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
+ L + A+ L N + + P+++ FN ++ + A + +M+ + P+ V
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T N LIN Y G +AF ++ G + + +T+ LI GLC + ++A QF EL
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 148 LAQGIQLNQVSYGILINGLC 167
+ + N ++ LI G C
Sbjct: 405 DKENLVPNSSTFSALIMGQC 424
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP + F+ + K + A QM+ G +P + + N ++ G++ +A
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
++ + PN T ++ G C + ++ + ++ ++ G + VSY LI G C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 168 KVGQTRAALRL 178
+ G +AL+L
Sbjct: 285 EKGLLSSALKL 295
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
I+ +N ++ L K A +++ ++P+ T + LI C F +
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELY 436
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+++ G PN TF L+ C N+ A Q E++ + I L+ + + NGL
Sbjct: 437 KSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQ 496
Query: 170 GQTRAALRLLR 180
G+ + +LL+
Sbjct: 497 GKDQLVKKLLQ 507
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 77.0 bits (188), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHY-SIAISLSHQMEFRGIMPDIVTL 89
LP + F ++L+ TP N+IL LV + Y A L G+MP+ +
Sbjct: 134 LPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSY 193
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N+L+ +C +S+A+ + K+L+R P+ ++ LI+G C QV A++ D++L
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 150 QGIQLNQVSYGILINGLCKVG 170
+G ++ LI GLC G
Sbjct: 254 KGFVPDRT----LIGGLCDQG 270
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ I +N ++ K A + M +G PD+VT + LIN YC ++ +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ +RG NT+T+TTLI G C + A +E+++ G+ + +++ ++ GLC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 169 VGQTRAALRLLR 180
+ R A +L
Sbjct: 128 KKELRKAFAILE 139
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
I P +T N +I+ +C ++ A +L + +G P+ +TF+TLI G C +V +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ E+ +GI N V+Y LI+G C+VG AA LL
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 103
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 60/115 (52%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA + + + +P ++ F+ ++ K K + + +M RGI+ + VT L
Sbjct: 27 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 86
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
I+ +C +G + A +L +++ G P+ ITF ++ GLC ++++A ++L
Sbjct: 87 IHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
++ L + + P ++ K++ L S A+ + ++E +G D+V N L+
Sbjct: 267 SMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVK 326
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC LG+M VA ++ ++GY PN T+ LI G C + AL +++ I+
Sbjct: 327 GYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRW 386
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
N ++ LI GL G+T L++L
Sbjct: 387 NFATFNTLIRGLSIGGRTDDGLKILE 412
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 8/143 (5%)
Query: 41 RLLQMRHT----PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
+LLQ+ T P+ + +N +L L K A SL +M+ P+ VT NILI+ Y
Sbjct: 203 KLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAY 258
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
C+ ++ + +L K G+ P+ +T T +++ LC +V AL+ + + ++G +++
Sbjct: 259 CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
V+ L+ G C +G+ R A R
Sbjct: 319 VACNTLVKGYCALGKMRVAQRFF 341
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 75 HQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN 134
QM G +P I+ + LI+ Y G++ + ++ ++ RGY P + TF +I G C
Sbjct: 482 DQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQ 541
Query: 135 DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
D+V ++F +++ +G + SY L+ LC G + A L
Sbjct: 542 DKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLF 586
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS+ FN IL LVK + +M GI D+ T IL+ ++ F +
Sbjct: 145 PSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKL 204
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
L + G PN + + TL+ LC N +V RA L+++ + N V++ ILI+ C
Sbjct: 205 LQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARS----LMSEMKEPNDVTFNILISAYC 259
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 76.6 bits (187), Expect = 8e-15, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 71/142 (50%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
FN+++ P+ +N +L + A+ M+ RGI PD T N +IN +C
Sbjct: 243 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
+M A + ++ P+ +++TT+IKG D+V L+ +E+ + GI+ N +
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362
Query: 159 YGILINGLCKVGQTRAALRLLR 180
Y L+ GLC G+ A +L+
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILK 384
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP+I N ++ L K A + ++ G++P++VT ++ Y G M A
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
VL ++L RG+ P+ T+T L+ G C + A D++ I+ N+V+YG++I LC
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 168 KVGQTRAA 175
K ++ A
Sbjct: 308 KEKKSGEA 315
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A L+ ++L+ P + ++ L K + A L + E +G +P ++T N L
Sbjct: 348 DEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTL 406
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G+++ A + + +R KPN T+ LI+GL N VK ++ +E+L G
Sbjct: 407 IAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGC 466
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N+ ++ IL GL K+G+ A++++
Sbjct: 467 FPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISL-SHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
S+ N +L L++ + + + ++ + E GI P+I T N+L+ C + A+ V
Sbjct: 154 SVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKV 213
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +I G PN +T+TT++ G ++ A + +E+L +G + +Y +L++G CK
Sbjct: 214 LDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCK 273
Query: 169 VGQTRAA 175
+G+ A
Sbjct: 274 LGRFSEA 280
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A + + + M P+++ + IL V A + +M RG PD T +L++
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC LG+ S A +V+ + K +PN +T+ +I+ LC + A DE+L +
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +I+ LC+ + A L R
Sbjct: 330 DSSLCCKVIDALCEDHKVDEACGLWR 355
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A + + + + P+ + + ++ L K K A ++ +M R MPD +
Sbjct: 278 SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C ++ A + K+LK P+ +TLI LC +V A + DE +G
Sbjct: 338 IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGS 396
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+ ++Y LI G+C+ G+ A RL
Sbjct: 397 IPSLLTYNTLIAGMCEKGELTEAGRL 422
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A F +L+ PS+ N ++ L + A+ L+ M G+ PD VT NIL
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ LG +S A+ V+ +L +G P+ IT+T L+ G C + L ++L++G +L
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 155 NQ-VSYGILINGLCKVGQTRAALRLL 179
N + ++++GLCK G+ AL L
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLF 386
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
SII + +L+ L KT A+SL +QM+ G+ PD+V +I+I+ C LG+ +A +
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++ + PN+ T L+ GLC + A D L++ G L+ V Y I+I+G K
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 170 GQTRAALRLLR 180
G AL L +
Sbjct: 482 GCIEEALELFK 492
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 33 NDAVCLFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
DAV LF R + + PS++ FN I++ K +A S + G++P + + NI
Sbjct: 204 EDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LIN C +G ++ A + + + K G +P+++T+ L KG L + A + ++L +G
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + ++Y IL+ G C++G L LL+
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLK 351
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ ++ L + + A+ E++ I P +V+ N +++ YC LG + +A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
K G P+ + LI GLCL + AL+ ++ G++ + V+Y IL G +G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 174 AALRLLR 180
A ++R
Sbjct: 310 GAWEVIR 316
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A+ LF +++ TPS+ FN ++ KT++ + A + ++ G+ P +V+ L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC-----------LNDQV-KRA 140
++ Y + G + ++ G P +T++ + KGLC L +++ ++
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
Q ++ ++GI +Q++Y +I LC+V A L
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L + L+ T I+ +N ++ K+ A+ L + GI P + T N LI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
YC ++ A +L I G P+ +++TTL+ K + E+ A+GI
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570
Query: 154 LNQVSYGILINGLCK 168
V+Y ++ GLC+
Sbjct: 571 PTNVTYSVIFKGLCR 585
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I +N I+ L + KH S A M+ R + T NILI+ C G + A S
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ + ++ + +TTLIK C+ + A++ +LL +G ++ Y +IN LC+
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 37/209 (17%)
Query: 7 RWFHRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKH 66
R F N ++ S L R ++A+ LFN++ +P ++ ++ ++ L K
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGR--IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
Query: 67 YSIAISLSHQMEFRGIMP-----------------------------------DIVTLNI 91
+ +A+ L +M + I+P DIV NI
Sbjct: 414 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ Y G + A + +++ G P+ TF +LI G C + A + D + G
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + VSY L++ G T++ L R
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRR 562
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A F +L+ PS+ N ++ L + A+ L+ M G+ PD VT NIL
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAK 300
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ LG +S A+ V+ +L +G P+ IT+T L+ G C + L ++L++G +L
Sbjct: 301 GFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFEL 360
Query: 155 NQ-VSYGILINGLCKVGQTRAALRLL 179
N + ++++GLCK G+ AL L
Sbjct: 361 NSIIPCSVMLSGLCKTGRIDEALSLF 386
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
SII + +L+ L KT A+SL +QM+ G+ PD+V +I+I+ C LG+ +A +
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
++ + PN+ T L+ GLC + A D L++ G L+ V Y I+I+G K
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 170 GQTRAALRLLR 180
G AL L +
Sbjct: 482 GCIEEALELFK 492
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 33 NDAVCLFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
DAV LF R + + PS++ FN I++ K +A S + G++P + + NI
Sbjct: 204 EDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LIN C +G ++ A + + + K G +P+++T+ L KG L + A + ++L +G
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + ++Y IL+ G C++G L LL+
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLK 351
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ ++ L + + A+ E++ I P +V+ N +++ YC LG + +A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
K G P+ + LI GLCL + AL+ ++ G++ + V+Y IL G +G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 174 AALRLLR 180
A ++R
Sbjct: 310 GAWEVIR 316
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A+ LF +++ TPS+ FN ++ KT++ + A + ++ G+ P +V+ L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC-----------LNDQV-KRA 140
++ Y + G + ++ G P +T++ + KGLC L +++ ++
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
Q ++ ++GI +Q++Y +I LC+V A L
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 644
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A L + L+ T I+ +N ++ K+ A+ L + GI P + T N LI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
YC ++ A +L I G P+ +++TTL+ K + E+ A+GI
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570
Query: 154 LNQVSYGILINGLCK 168
V+Y ++ GLC+
Sbjct: 571 PTNVTYSVIFKGLCR 585
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I +N I+ L + KH S A M+ R + T NILI+ C G + A S
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ + ++ + +TTLIK C+ + A++ +LL +G ++ Y +IN LC+
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 37/209 (17%)
Query: 7 RWFHRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKH 66
R F N ++ S L R ++A+ LFN++ +P ++ ++ ++ L K
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGR--IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
Query: 67 YSIAISLSHQMEFRGIMP-----------------------------------DIVTLNI 91
+ +A+ L +M + I+P DIV NI
Sbjct: 414 FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ Y G + A + +++ G P+ TF +LI G C + A + D + G
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + VSY L++ G T++ L R
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRR 562
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 1/150 (0%)
Query: 30 SLPNDAVCLFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
S+P+ A+ +F R+ ++ P+I +N +L V+ K + SL E G+ P++ T
Sbjct: 92 SMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQT 151
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N+LI C + A L + K G+KP+ +++T+I L ++ AL+ DE+
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+G+ + Y ILI+G K + A+ L
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Score = 70.9 bits (172), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 69/125 (55%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
N ++ L++ A +M G P +V+ NILI C G+ A + + ++L+
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 115 RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRA 174
G+KP+ T++ L+ GLC + ++ AL+ + L G++ + + + ILI+GLC VG+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 175 ALRLL 179
A+ ++
Sbjct: 588 AMTVM 592
Score = 63.5 bits (153), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +L+ P + ++ +L L + + +A+ L HQ G+ D++ NILI
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ C +G++ A +V+A + R N +T+ TL++G RA + G+Q
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 154 LNQVSYGILINGLC 167
+ +SY ++ GLC
Sbjct: 637 PDIISYNTIMKGLC 650
Score = 63.5 bits (153), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISL-SHQMEFRGIMPDIVTLNI 91
+DA+ LF+ + + P + +N ++ +K K + A+ L +E + P++ T NI
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ G++ + ++ + + + T+++LI GLC V +A +EL +
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ V+Y ++ G C+ G+ + +L L R
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWR 349
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D + ++ R+ Q + ++ ++ L + A S+ ++++ R D+VT N +
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ +C G++ + L +I++ N +++ LIKGL N ++ A + A+G
Sbjct: 332 LGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
++ +YGI I+GLC G AL +++
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 66/132 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L+++ LQ ++ N ++ L A+++ ME R ++VT N L+
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ +G + A + + K G +P+ I++ T++KGLC+ V A++F D+ GI
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 155 NQVSYGILINGL 166
++ IL+ +
Sbjct: 673 TVYTWNILVRAV 684
Score = 53.5 bits (127), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ +N ++ L K + A + +M G PD+ T +IL+ C ++ +A +
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ L+ G + + + LI GLC ++ A+ + + N V+Y L+ G K
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 169 VGQTRAA 175
VG + A
Sbjct: 617 VGDSNRA 623
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ K K + A M G PD+ + + +IN G++ A +
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA-QGIQLNQVSYGILINGLC 167
++ +RG P+ + LI G K A++ D LL + N ++ I+I+GL
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS 266
Query: 168 KVGQTRAALRL 178
K G+ L++
Sbjct: 267 KCGRVDDCLKI 277
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 52/102 (50%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+ + ++E G D+ +I+C C ++ A +++ ++ K G + N+ LI
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
GL + ++ A F E+ G + VSY ILI GLCK G+
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 58/128 (45%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
+ + I+ L K K A +L +M G+ + N LI ++ A L
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
++ K G +P +++ LI GLC + A F E+L G + + +Y IL+ GLC+
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 171 QTRAALRL 178
+ AL L
Sbjct: 549 KIDLALEL 556
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 64/140 (45%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
R+++ +++ +I+ +N ++ L++ A + M +G D T I I+ C G
Sbjct: 349 RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ A V+ ++ G + + ++I LC +++ A E+ G++LN
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 161 ILINGLCKVGQTRAALRLLR 180
LI GL + + A LR
Sbjct: 469 ALIGGLIRDSRLGEASFFLR 488
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR--GIMPDIVTLN 90
+D +++ P I +N ++ V+ ++ S A L +ME G++PD+ T N
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+++ +C QM A VL K+++RG P+ T+T +I G D + A + HDE+L +
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Query: 151 G 151
G
Sbjct: 722 G 722
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L N +LQ ++ +N IL L K K A L ++M R + PD TL ILI+
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C LG + A + K+ ++ + + +T+ TL+ G + A + +++++ I
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
+SY IL+N LC G A R+
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRV 572
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ N ++ L K + Q++ +G+ PDIVT N LI+ Y G M AF ++
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+ +G+ P T+ T+I GLC + + +RA + E+L G+ + +Y L+ CK
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 170 GQ 171
G
Sbjct: 354 GD 355
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 78/143 (54%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F+ + P ++ F+ +++ ++ + A+ + ++ G++PD V ILI YC
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G +SVA ++ ++L++G + +T+ T++ GLC + A + +E+ + + +
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+ ILI+G CK+G + A+ L +
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQ 504
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
T SI N ++ LV+ +A + ++ G+ ++ TLNI++N C G+M +
Sbjct: 197 TVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGT 256
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
L+++ ++G P+ +T+ TLI ++ A + + + +G +Y +INGLC
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 168 KVGQTRAA 175
K G+ A
Sbjct: 317 KHGKYERA 324
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF ++ + R ++ +N +L K A + M + I+P ++ +IL+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C G ++ AF V +++ + KP + ++IKG C + F ++++++G
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ +SY LI G + A L++
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVK 644
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +L+ +P + +L K + M R ++PD+V + +++ +
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A + + G P+ + +T LI+G C + A+ +E+L QG ++ V
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 158 SYGILINGLCK 168
+Y +++GLCK
Sbjct: 447 TYNTILHGLCK 457
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 13 PTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAIS 72
P + SL + S +L + A+ FN + + P + + ++ + S+A++
Sbjct: 373 PDLVCFSSMMSLFTRSGNL-DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 73 LSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
L ++M +G D+VT N +++ C + A + ++ +R P++ T T LI G C
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491
Query: 133 LNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ A++ ++ + I+L+ V+Y L++G KVG A
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +++ ++ P+++ N ++ ++ + S S +M G +PD ++ N LI
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 94 NCYCHLGQMSVAFSVLAKILKR--GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+ MS AF ++ K+ + G P+ T+ +++ G C +Q+K A +++ +G
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
+ ++ +Y +ING A R+
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
S+ L +A L N + +P + +N ++ L K Y A + +M G+ PD
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T L+ C G + V + + R P+ + F++++ + + +AL + + +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
G+ + V Y ILI G C+ G A+ L
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 68/152 (44%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R + +A LFN + + P ++ K + A+ L +M+ + I D+VT
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N L++ + +G + A + A ++ + P I+++ L+ LC + A + DE++
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ I+ + +I G C+ G L
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ L ++L P +N I+ S A+ + +M+ G+ PD +T N LI
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
G++ A L ++ GY+P+T T+T+L+ G+C + AL +E+ A+G
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA 367
Query: 154 LNQVSYGILINGLCKV 169
N +Y L++GLCK
Sbjct: 368 PNDCTYNTLLHGLCKA 383
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 69/132 (52%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ F ++ + +K+ A+ L ++ G PD N ++ +C L + S A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+ + G +P+ IT+ TLI GL +V+ A + ++ G + + +Y L+NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 169 VGQTRAALRLLR 180
G++ AL LL
Sbjct: 348 KGESLGALSLLE 359
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNI 91
++A L L + P +N +L L K K + +M + + PD+V+ I
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ C+ + A +++K+ G+KP+ + T++KG C + A+ + ++ +G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ +Q++Y LI GL K G+ A L+
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV ++ ++ + P I +N ++ L K A M G PD T L
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G+ A S+L ++ RG PN T+ TL+ GLC + + ++ ++ + + G+
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+L Y L+ L K G+ A +
Sbjct: 402 KLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G+ PD VT +I + C G++ A ++ ++ ++ P+T T+ L+K LC +
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 141 LQFHDELLAQ-GIQLNQVSYGILINGLCKVGQTRAALRLL 179
+F DE+ ++ + VS+ ILI+ +C R A+ L+
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLV 253
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 74/142 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L + ++ P+ + ++ L + A L ++ +G+ PD+V +N L++
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C +G M AFS+L ++ P+ +T+ L++GLC + + A + E+ +GI+
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535
Query: 155 NQVSYGILINGLCKVGQTRAAL 176
+ +SY LI+G K G T+ A
Sbjct: 536 DHISYNTLISGYSKKGDTKHAF 557
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF +++ P ++ N ++ + A SL +M+ I PD VT N L+
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G+ A ++ ++ +RG KP+ I++ TLI G K A DE+L+ G
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
++Y L+ GL K + A LLR
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLR 596
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
+ +++ P+ +N ++ L A L ++ +GI+ D VT NILIN YC
Sbjct: 351 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQH 410
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
G AF++ +++ G +P T+T+LI LC ++ + A + ++++ +G++ + V
Sbjct: 411 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 160 GILINGLCKVGQTRAALRLLR 180
L++G C +G A LL+
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLK 491
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N IL+ + S + +M+ G++PD V+ NILI + G + +AF+
Sbjct: 293 PDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++K+G P T+ TLI GL + ++++ A E+ +GI L+ V+Y ILING C+
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 169 VGQTRAALRL 178
G + A L
Sbjct: 410 HGDAKKAFAL 419
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ +A + +M +G++P T N LI+ ++ A +
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +I ++G +++T+ LI G C + K+A HDE++ GIQ Q +Y LI LC+
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 169 VGQTRAALRLLR 180
+TR A L
Sbjct: 445 KNKTREADELFE 456
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L + M P + +N ++ L + A L +M+ RGI PD ++ N LI+
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
Y G AF V ++L G+ P +T+ L+KGL N + + A + E+ ++GI
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 155 NQVSYGILINGLCKVGQTRA 174
N S+ +I + + ++
Sbjct: 606 NDSSFCSVIEAMSNLDAKKS 625
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I+ +N ++ A + +M+ +G PD+ T N +++ C+ G+ S V
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS---EV 314
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ + G P+++++ LI+G N ++ A + DE++ QG+ +Y LI+GL
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374
Query: 169 VGQTRAALRLLR 180
+ AA L+R
Sbjct: 375 ENKIEAAEILIR 386
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ F + + P N ILT L + A M I ++ T NI+
Sbjct: 172 DEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 231
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C G++ A L + G KP +T+ TL++G L +++ A E+ ++G
Sbjct: 232 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
Q + +Y +++ +C G+ LR ++
Sbjct: 292 QPDMQTYNPILSWMCNEGRASEVLREMK 319
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A + + +M ++ FN ++ L K A ME GI P IVT N L
Sbjct: 207 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL 266
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ + G++ A +++++ +G++P+ T+ ++ +C + L+ E+ G+
Sbjct: 267 VQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GL 323
Query: 153 QLNQVSYGILINGLCKVGQTRAAL 176
+ VSY ILI G G A
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAF 347
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM--PDIVTLN 90
+A+ F R+ + P + +N I+ L + ++ A L QM+ G PD T
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYT 241
Query: 91 ILINCYCHLG-----------QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
ILI+ YC G +M A + ++L RG+ P+ +T+ LI G C +++ R
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGR 301
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
AL+ +++ +G NQV+Y I + A+ ++R
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMR 342
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 76/148 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV L + + +PS + +N ++ L K + L M +G +P+ VT N L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++ A S+L +++ PN +T+ TLI GL + A++ + +G
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
LNQ Y +LI+GL K G+ A+ L R
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWR 386
Score = 75.1 bits (183), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 75/145 (51%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F + + + P + ++ L K + A+ L +M+ G P V N+LI+
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G ++ ++ + +G PN +T+ TLI GLCL ++ +A+ + +++
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N V+YG LINGL K + A+RLL
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLL 350
Score = 73.2 bits (178), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
PN+A + NR++ P+ ++ ++ KT A+ + +M+ G + ++
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ- 150
LI+ C +G++ A V +K+L G KP+T+ ++++IKGLC + AL+ + E+L Q
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 151 --GIQLNQVSYGILINGLCKVGQTRAALRLL 179
Q + V+Y IL++GLC A+ LL
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLL 563
Score = 71.6 bits (174), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 28 SRSLPNDAV--CLFNRLLQMRHTPSIIE----------------FNKILTPLVKTKHYSI 69
S+ +PND L N L++ R + ++ +++ L K
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+SL +M +G P+IV ++L++ C G+ + A +L +++ G PN T+++L+K
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
G + A+Q E+ G N+ Y +LI+GLC VG+ + A+
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
N + M +P+ + FN ++ L K + AI + M R +PD T L++ C
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
++ A +L ++ G P+ + + LI GLC + R + D + +G N+V+Y
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 160 GILINGLCKVGQTRAALRLL 179
LI+GLC G+ A+ LL
Sbjct: 296 NTLIHGLCLKGKLDKAVSLL 315
Score = 66.6 bits (161), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 74/148 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ AV L R++ + P+ + + ++ LVK + + A+ L ME RG + ++L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G+ A S+ K+ ++G KPN + ++ L+ GLC + A + + ++A G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N +Y L+ G K G A+++ +
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWK 456
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 1 MSVLRYRWFHRNPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTP 60
+S + R +H N + ++ S L ++ +A+ L+ ++ + P+I+ ++ ++
Sbjct: 350 LSSMEERGYHLN-QHIYSVLISGLFKEGKA--EEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
L + + A + ++M G +P+ T + L+ + G A V ++ K G N
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
++ LI GLC +VK A+ ++L GI+ + V+Y +I GLC +G AAL+L
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM---EFRGIMPDIVTLN 90
+A+ +++++L + P + ++ I+ L A+ L H+M E PD+VT N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC-LNDQVKRALQFHDELLA 149
IL++ C +S A +L +L RG P+ IT T + L ++ + F +EL+
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Query: 150 QGIQLNQVS 158
+ ++ +VS
Sbjct: 605 RLLKRQRVS 613
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 74.7 bits (182), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 85/163 (52%), Gaps = 15/163 (9%)
Query: 17 LAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQ 76
L + S HS R DA+ +P+++ F ++ K +A+SL +
Sbjct: 179 LQLALKSFHSMKR----DAL-----------SPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
M + ++VT LI+ +C G+M A + +++++ +PN++ +TT+I G
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
A++F ++L QG++L+ +YG++I+GLC G+ + A ++
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 70/132 (53%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P+++ ++ + K+ +A+ H M+ + P++VT LI+ YC G + VA S
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ ++ + N +T+T LI G C +++RA + + ++ ++ N + Y +I+G
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 168 KVGQTRAALRLL 179
+ G + A++ L
Sbjct: 280 QRGDSDNAMKFL 291
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R ++A+ ++L I + I++ L A + ME ++PD+V
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
++N Y G+M A ++ K+++RG++P+ + +T+I G+ N Q+ A+ +
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK 400
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
A N V Y +LI+ LCK G RL
Sbjct: 401 A-----NDVMYTVLIDALCKEGDFIEVERLF 426
Score = 53.5 bits (127), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 71/139 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+++R+++ R P+ + + I+ + A+ +M +G+ DI ++I+ C
Sbjct: 255 MYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ A ++ + K P+ + FTT++ + ++K A+ + +L+ +G + + V
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Query: 158 SYGILINGLCKVGQTRAAL 176
+ +I+G+ K GQ A+
Sbjct: 375 ALSTMIDGIAKNGQLHEAI 393
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 37/176 (21%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
L+ +TP FN +++ + K A + H M G PD+++ N LI+ +C G
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 102 MSVAFSVLAKI-----------------LKRGYK--------------------PNTITF 124
+ A VL + L G+ PN +T+
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTY 166
Query: 125 TTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+T I C + +++ AL+ + + N V++ LI+G CK G A+ L +
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYK 222
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 69/144 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV L+ + ++R + +++ + ++ K A + +M + P+ + +I+
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ G A LAK+L +G + + + +I GLC N ++K A + +++ +
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
+ V + ++N K G+ +AA+ +
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNM 360
Score = 50.1 bits (118), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ F ++ K+ A+++ H++ RG PD+V L+ +I+ GQ+ A
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY 395
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K N + +T LI LC + ++ G+ ++ Y I GLCK
Sbjct: 396 FCI-----EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 450
Query: 169 VGQTRAALRL 178
G A +L
Sbjct: 451 QGNLVDAFKL 460
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ +RL + + P NK + L+ + +++ + RG P + N ++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-- 151
+ C LGQ+ A ++ + + G +P+ I++ +LI G C N ++ A + L A
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 152 -IQLNQVSYGILINGLCKV 169
+ + VS+ L NG K+
Sbjct: 124 ICKPDIVSFNSLFNGFSKM 142
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 83 MPDIVTLNI----LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVK 138
+PD T N LIN C G +S+ F LA ++ RGY P+ +F +++ +C QVK
Sbjct: 18 LPDPFTCNKHIHQLINSNC--GILSLKF--LAYLVSRGYTPHRSSFNSVVSFVCKLGQVK 73
Query: 139 RALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
A + G + + +SY LI+G C+ G R+A
Sbjct: 74 FAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Score = 46.6 bits (109), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G++PD I C G + AF + ++++ G + + +TTLI GL + A
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
Q DE+L GI + + +LI K G AA LL
Sbjct: 493 RQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L ++ P++ + ++ L + S A++L QM GI PD +L
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +C + A +L +L+ G PN IT+ LIKG C V +A+ ++L Q +
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNL 360
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y LI G C G +A RLL
Sbjct: 361 VPDLITYNTLIAGQCSSGNLDSAYRLL 387
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 12 NPTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAI 71
+P + F + H + + + A +F + Q + + + +++ L + K A+
Sbjct: 187 DPDYFTYTSFITGHCRRKEV-DAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 72 SLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
SL +M+ P++ T +LI+ C GQ S A ++ ++ + G KP+ +T LI+
Sbjct: 246 SLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSF 305
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
C D + A + +L G+ N ++Y LI G CK
Sbjct: 306 CSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N +L+ L + L +M + PDI T N L+N YC LG + A + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ G P+ T+T+ I G C +V A + E+ G N+VSY LI GL + +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 174 AALRLL 179
AL LL
Sbjct: 243 EALSLL 248
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ LF ++ + P + ++ A L M G+MP+++T N L
Sbjct: 277 SEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNAL 336
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I +C + A +L+K+L++ P+ IT+ TLI G C + + A + + G+
Sbjct: 337 IKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Query: 153 QLNQ 156
NQ
Sbjct: 396 VPNQ 399
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 73.6 bits (179), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 74/143 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + H P +I ++ ++ L K A L ++M +G+ P + T N +I+ +C
Sbjct: 601 LFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC 660
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ S + ++ + P+ IT+T+LI GLC + + A+ +E+ + N++
Sbjct: 661 KEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRI 720
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
++ LI GLCK G + AL R
Sbjct: 721 TFMALIQGLCKCGWSGEALVYFR 743
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 41 RLLQMRHTPSIIEFNKI-LTPLVK----TKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
RL +MR F+K LTP+++ T A+S+ +++ RG + + ++ IL+
Sbjct: 201 RLKEMRDCG--FHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVS 257
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
+C GQ+ AF ++ + +R + N T+ LI G ++ +A Q +++ G+ +
Sbjct: 258 FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNAD 317
Query: 156 QVSYGILINGLCKVGQTRAALRL 178
Y +LI GLCK AL L
Sbjct: 318 IALYDVLIGGLCKHKDLEMALSL 340
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 65/146 (44%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV L + ++Q P + +N I+ + K ++ L +M+ G+ P TLN +
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYG 517
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C A +L K+ G++P T L+K LC N + A ++ D++ +G
Sbjct: 518 CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLG 577
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ V+ I+GL K L L R
Sbjct: 578 HMVASTAAIDGLIKNEGVDRGLELFR 603
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 55/127 (43%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS N I L + + A+ L +M F G P I L+ C G+ A
Sbjct: 507 PSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKY 566
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + G+ + + T I GL N+ V R L+ ++ A G + ++Y +LI LCK
Sbjct: 567 LDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCK 626
Query: 169 VGQTRAA 175
+T A
Sbjct: 627 ACRTMEA 633
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 54/101 (53%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
+ I+PD +L+I+INC ++ +A ++L I++ G P + + +I+G+C + +
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 140 ALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+L+ E+ G++ +Q + + L + AL LL+
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLK 533
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 53/116 (45%)
Query: 61 LVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPN 120
L+K + + L + G PD++ ++LI C + A + +++ +G KP
Sbjct: 589 LIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPT 648
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
T+ ++I G C ++ R L + + ++Y LI+GLC G+ A+
Sbjct: 649 VATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 73.6 bits (179), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R P++A +F L + H PS+I + +L + K Y S+ ++E G D +
Sbjct: 58 RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIF 117
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N +IN + G M A L K+ + G P T T+ TLIKG + + +R+ + D +L
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 149 AQG---IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+G + N ++ +L+ CK + A +++
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I FN ++ K K A + +ME G+ PD VT N + CY G+ A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 109 LAK--ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+ + ++K KPN T ++ G C +V+ L+F + ++ N V + LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 167 CKV 169
+V
Sbjct: 306 VEV 308
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM---------P 84
DAV ++ ++ P+ +N ++ K Y IA E +M P
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLI------KGYGIAGKPERSSELLDLMLEEGNVDVGP 186
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ-- 142
+I T N+L+ +C ++ A+ V+ K+ + G +P+T+T+ T+ + RA
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ + + N + GI++ G C+ G+ R LR +R
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYS---------IAISLSHQMEFRG--- 81
D + R+ +MR +++ FN ++ V+ + +S + ++E G
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQK 337
Query: 82 -------------IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI 128
+ D++T + ++N + G M A V +++K G KP+ ++ L
Sbjct: 338 MKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 397
Query: 129 KGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
KG + K+A + + L+ + + N V + +I+G C G A+R+
Sbjct: 398 KGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVF 447
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 73.6 bits (179), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R P++A +F L + H PS+I + +L + K Y S+ ++E G D +
Sbjct: 58 RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIF 117
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N +IN + G M A L K+ + G P T T+ TLIKG + + +R+ + D +L
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 149 AQG---IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+G + N ++ +L+ CK + A +++
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I FN ++ K K A + +ME G+ PD VT N + CY G+ A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 109 LAK--ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+ + ++K KPN T ++ G C +V+ L+F + ++ N V + LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 167 CKV 169
+V
Sbjct: 306 VEV 308
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM---------P 84
DAV ++ ++ P+ +N ++ K Y IA E +M P
Sbjct: 133 DAVQALLKMKELGLNPTTSTYNTLI------KGYGIAGKPERSSELLDLMLEEGNVDVGP 186
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ-- 142
+I T N+L+ +C ++ A+ V+ K+ + G +P+T+T+ T+ + RA
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ + + N + GI++ G C+ G+ R LR +R
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D + R+ +MR +++ FN ++ V+ + M+ + D++T + ++
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVM 337
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N + G M A V +++K G KP+ ++ L KG + K+A + + L+ + +
Sbjct: 338 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-R 396
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
N V + +I+G C G A+R+
Sbjct: 397 PNVVIFTTVISGWCSNGSMDDAMRVF 422
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 73.2 bits (178), Expect = 9e-14, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 24 LHSHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+H+ S+S P A L + + + P I +N +++ K + A+S+ +ME G+
Sbjct: 210 VHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGV 269
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
P+IVT N I+ + G+M A + +I K N +T+TTLI G C + + AL+
Sbjct: 270 APNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALR 328
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + ++G V+Y ++ LC+ G+ R A RLL
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +++++ +I +N ++ K+ A L +ME +G+ PDI T N LI+ YC
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
A SV ++ + G PN +T+ + I G +++ A + E + + N V
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHV 308
Query: 158 SYGILINGLCKVGQTRAALRL 178
+Y LI+G C++ ALRL
Sbjct: 309 TYTTLIDGYCRMNDIDEALRL 329
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+ L ME RG P +VT N ++ C G++ A +L ++ + +P+ IT TLI
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
C + + A++ +++ G++L+ SY LI+G CKV
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
ND++ +F ++ P + +L LVK + + +M G++ +I N+L
Sbjct: 150 NDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVL 209
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ G A +L+++ ++G P+ T+ TLI C AL D + G+
Sbjct: 210 VHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGV 269
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N V+Y I+G + G+ R A RL R
Sbjct: 270 APNIVTYNSFIHGFSREGRMREATRLFR 297
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 62/132 (46%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P ++ +N IL L + A L +M + I PD +T N LIN YC + M A
Sbjct: 339 SPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVK 398
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
V K+++ G K + ++ LI G C +++ A + ++ +G +Y L++G
Sbjct: 399 VKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFY 458
Query: 168 KVGQTRAALRLL 179
+ +LL
Sbjct: 459 NQNKQDEITKLL 470
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 69/128 (53%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + N +L P++ N ++ VK A + ++M I PD T N+L+
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C LG + +AF + ++L+RG +P+ IT+T L++GLC ++K+A + A GI +
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Query: 155 NQVSYGIL 162
+ V + IL
Sbjct: 544 DHVPFLIL 551
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+ + +M + + D V N++I C G M A+ + ++KRG P+ T+ TLI
Sbjct: 284 ALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 343
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
LC + A H + G+ +Q+SY ++I GLC G A
Sbjct: 344 ALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 61/101 (60%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+ L +M + G++P ++T N L+N C G + A ++ ++ + G PN +++ TLIK
Sbjct: 140 ALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIK 199
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
GLC + V +AL + + GI+ N+V+ I+++ LC+ G
Sbjct: 200 GLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 69/131 (52%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N ++ + S A+S+ + M G+ P++ T N LI+ Y G++ A+ V
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ P+T T+ L+ C ++ A Q +DE+L +G Q + ++Y L+ GLC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 169 VGQTRAALRLL 179
G+ + A LL
Sbjct: 523 KGRLKKAESLL 533
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ ++ + Q + +N I+ L + + A M RG+ PD+ T N LI+
Sbjct: 284 ALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 343
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G+ A + + G P+ I++ +I+GLC++ V RA +F +L +
Sbjct: 344 ALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLP 403
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ + ++I+G + G T +AL +L
Sbjct: 404 EVLLWNVVIDGYGRYGDTSSALSVL 428
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++ R PS +N ++ K + A+ L +M G+ P+I+T + LI+ YC
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
++ + A + ++ +G P+ +T+T LI +K AL+ + ++L GI N
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 158 SYGILINGLCKVGQTRAAL 176
++ L++G K G+ A+
Sbjct: 516 TFACLVDGFWKEGRLSVAI 534
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
Query: 24 LHSHSRSLPN-DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+H H +S +AV L + + + +P + + ++ L + A L +M+ I
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
P T N LI+ YC M A + +++ G +PN ITF+TLI G C +K A+
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+ E+ +GI + V+Y LI+ K + ALRL
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A LF +++ P++ +N ++ K+ + A+ L +ME + PD+ T ILIN
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C Q++ A + K+ P++ T+ +LI G C +++AL E+ A G++
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N +++ LI+G C V +AA+ L
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGL 466
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+II F+ ++ + A+ L +M +GI+PD+VT LI+ + M A +
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ +L+ G PN TF L+ G ++ A+ F+ E Q N V + LI GLC+
Sbjct: 502 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561
Query: 169 VGQTRAALRLL 179
G A R
Sbjct: 562 NGYILRASRFF 572
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L+ +L P+++ F ++ K + A SL M G+ P++ N LI+
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C G M A +L+++ P+ T+T LI GLC+ DQV A + ++ + I
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
+ +Y LI+G CK AL L
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDL 431
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 65/142 (45%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + + + P++ + + L + A + M+ G++P++ T + +I+ YC
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A+ + +IL PN + F TL+ G C ++ A ++ G+ N
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY 340
Query: 158 SYGILINGLCKVGQTRAALRLL 179
Y LI+G CK G A+ LL
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLL 362
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 44 QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQ-MEFRGIMPDIVTLNILINCYCHLGQM 102
+M+ +P IL LV+ + + ++ + +Q M RG++PD+ +L C G
Sbjct: 157 EMKCSPDSKACLSILNGLVRRRRFD-SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 103 SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
S +L ++ G KPN +T I LC +++++ A + + + G+ N +Y +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 163 INGLCKVGQTRAALRLLR 180
I+G CK G R A L +
Sbjct: 276 IDGYCKTGNVRQAYGLYK 293
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ ++ ++ KT + A L ++ ++P++V L++ +C ++ A S+
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++K G PN + LI G C + + A+ E+ + + + +Y ILINGLC
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 169 VGQTRAALRLLR 180
Q A RL +
Sbjct: 387 EDQVAEANRLFQ 398
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%)
Query: 67 YSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTT 126
YS L +M GI P++ I I C +M A + + K G PN T++
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274
Query: 127 LIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+I G C V++A + E+L + N V +G L++G CK + A L
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF 327
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%)
Query: 43 LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQM 102
L+ R P +I + ++ + S A + +M+ GI P++ T +I+I+ C GQ+
Sbjct: 247 LKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQI 306
Query: 103 SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
S A V A +L G PN ITF L++ + ++ LQ ++++ G + + ++Y L
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 163 INGLCKVGQTRAALRLL 179
I C+ A+++L
Sbjct: 367 IEAHCRDENLENAVKVL 383
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
SI F ++ V+ S A+ ++ME G +PD + +I+I+ + S A S
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
LK ++P+ I +T L++G C ++ A + E+ GI+ N +Y I+I+ LC+
Sbjct: 245 DS-LKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRC 303
Query: 170 GQTRAA 175
GQ A
Sbjct: 304 GQISRA 309
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F +L P+ I FN ++ VK + + +QM+ G PD +T N LI +C
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A VL ++K+ + N TF T+ + + V A + + +++ + N V
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV 431
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y IL+ T L++ +
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKK 454
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 64/115 (55%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F R+ +M+ P+++ +N +L L K AI L M +G P+ +T N L
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
+C C ++++A +L K++ G P+ T+ T+I GL N QVK A+ F ++
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 74/144 (51%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L + +++ P +I N ++ L K A + +M+ + P +VT N L
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ G++ A + ++++G PNTITF TL LC ND+V AL+ +++ G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 153 QLNQVSYGILINGLCKVGQTRAAL 176
+ +Y +I GL K GQ + A+
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAM 663
Score = 66.6 bits (161), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRH-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
+DA+ L+ L+ R +P+ + ++ L K+ A L M G P+ NI
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LIN + G+ A ++ +++K G +P+ T++ L+ LC+ +V L + EL G
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + V Y ++INGL K + AL L
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 22 SSLHSHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
+SL+S +++ +A +F L + P + +N ++ K AI L +M
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G PD++ +N LIN ++ A+ + ++ + KP +T+ TL+ GL N +++ A
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++ + ++ +G N +++ L + LCK + AL++L
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 69/131 (52%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I+ N L L K A + + ++ G++PD VT N+++ CY +G++ A +
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L+++++ G +P+ I +LI L D+V A + + ++ V+Y L+ GL K
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 169 VGQTRAALRLL 179
G+ + A+ L
Sbjct: 586 NGKIQEAIELF 596
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 64/139 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F ++ RH P + + +L + +ME G +PD+VT IL++ C
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G AF L + +G PN T+ TLI GL ++ AL+ + + G++
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 158 SYGILINGLCKVGQTRAAL 176
+Y + I+ K G + +AL
Sbjct: 435 TYIVFIDYYGKSGDSVSAL 453
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 61/131 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ F + L + + A + +M+ G PD+VT +LI+ C ++ A V
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+ +KP+ +T+ TL+ N + QF E+ G + V++ IL++ LCK
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 169 VGQTRAALRLL 179
G A L
Sbjct: 376 AGNFGEAFDTL 386
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ L++ IA + Q++ G +PD+ T N L++ Y G++ F +
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA-QGIQLNQVSYGILINGLC 167
++ + NTIT +I GL V AL + +L++ + +YG LI+GL
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 168 KVGQTRAALRLL 179
K G+ A +L
Sbjct: 903 KSGRLYEAKQLF 914
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 34 DAVCLFNRLLQMRH----------TPSIIEFNKILTPLVKTKHYSIAISLSHQMEF-RGI 82
D +C+ R+ + H P ++ +N I+ L K+ A+ L ++M+ RGI
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PD+ T N LI G + A + +I + G +PN TF LI+G L+ + + A
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 143 FHDELLAQGIQLNQVSYGILIN 164
+ ++ G N +Y L N
Sbjct: 1089 VYQTMVTGGFSPNTGTYEQLPN 1110
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF +L P+ +N ++ K A +L +M G+ PD+ T ++L+
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL-LAQGI 152
+C C +G++ ++ + G P+ + + +I GL + +++ AL +E+ ++GI
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ +Y LI L G A
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEA 1051
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 42 LLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
LQ++ T P + +N +L K+ L +M + +T NI+I+
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 99 LGQMSVAFSVLAKILK-RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A + ++ R + P T+ LI GL + ++ A Q + +L G + N
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
Y ILING K G+ AA L +
Sbjct: 928 IYNILINGFGKAGEADAACALFK 950
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 63/147 (42%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A + R+ P ++ + ++ L + A + +M+ PD VT L
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ + + +++ K G+ P+ +TFT L+ LC A D + QGI
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N +Y LI GL +V + AL L
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELF 421
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 10/156 (6%)
Query: 34 DAVC-------LFNRLLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM 83
DA+C F+ L MR P++ +N ++ L++ A+ L ME G+
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
P T + I+ Y G A K+ +G PN + + L + + A Q
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
L G+ + V+Y +++ KVG+ A++LL
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 526
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 9 FHRNPTFLLAMPFSSLHSHSRSLPND-----AVCLFNRLLQMRHTPSIIEFNKILTPLVK 63
FH+ +F SL++ L ++ A F+ MR P+ + FN ++ +
Sbjct: 139 FHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLD 198
Query: 64 TKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTIT 123
+ A + +M + P +VT N LI C M A S+L ++K+ +PN +T
Sbjct: 199 KCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVT 258
Query: 124 FTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
F L+KGLC + A + ++ +G + V+YGIL++ L K G+ A LL
Sbjct: 259 FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLL 314
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L +++ R P+ + F ++ L Y+ A L ME+RG P +V IL++
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
G++ A +L ++ KR KP+ + + L+ LC +V A + E+ +G +
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
N +Y ++I+G C++ + L +L
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVL 384
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ +F+++ +I N ++ LV A S + + P+ V+ NIL
Sbjct: 133 DKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNIL 192
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I + A V ++L+ +P+ +T+ +LI LC ND + +A ++++ + I
Sbjct: 193 IKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRI 252
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ N V++G+L+ GLC G+ A +L+
Sbjct: 253 RPNAVTFGLLMKGLCCKGEYNEAKKLM 279
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 34 DAVC-LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A C +F+ +L+M PS++ +N ++ L + A SL M + I P+ VT +L
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C G+ + A ++ + RG KP + + L+ L ++ A E+ + I
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + V Y IL+N LC + A R+L
Sbjct: 323 KPDVVIYNILVNHLCTECRVPEAYRVL 349
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ + +++ L K A L +M+ R I PD+V NIL+N C ++ A+ V
Sbjct: 289 PGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRV 348
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ +G KPN T+ +I G C + L + +LA ++ ++ GL K
Sbjct: 349 LTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIK 408
Query: 169 VG 170
G
Sbjct: 409 GG 410
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
S P+ AV LF + + + FN IL L K+K A L + R D V
Sbjct: 138 SAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTV 196
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T N+++N +C + + A VL ++++RG PN T+ T++KG Q++ A +F E+
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256
Query: 148 LAQGIQLNQVSYGILINGLCKVGQTRAA 175
+ +++ V+Y +++G G+ + A
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRA 284
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
R L+ R + + +N IL K A+ + +M RGI P++ T N ++ + G
Sbjct: 185 RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
Q+ A+ ++ KR + + +T+TT++ G + ++KRA DE++ +G+ + +Y
Sbjct: 245 QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 304
Query: 161 ILINGLCKVGQTRAAL 176
+I LCK A+
Sbjct: 305 AMIQVLCKKDNVENAV 320
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 69/137 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + +++ P++ +N +L + A +M+ R D+VT +++
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ G++ A +V ++++ G P+ T+ +I+ LC D V+ A+ +E++ +G +
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 155 NQVSYGILINGLCKVGQ 171
N +Y +LI GL G+
Sbjct: 334 NVTTYNVLIRGLFHAGE 350
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 67/129 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F+ +++ PS+ +N ++ L K + A+ + +M RG P++ T N+LI
Sbjct: 287 VFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
H G+ S ++ ++ G +PN T+ +I+ +V++AL +++ + N
Sbjct: 347 HAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 406
Query: 158 SYGILINGL 166
+Y ILI+G+
Sbjct: 407 TYNILISGM 415
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+M G++P + T N +I C + A + ++++RGY+PN T+ LI+GL
Sbjct: 290 EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ R + + +G + N +Y ++I + + AL L
Sbjct: 350 EFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFE 394
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 77/148 (52%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P +F + R P ++ ++ L+K + L + M+ +G + D NI
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ +C G+++ A+ +L ++ +G++P +T+ ++I GL D++ A +E ++
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
I+LN V Y LI+G KVG+ A +L
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A + L+Q TP++ +N +L LVK + + A+ M+ P+ VT IL
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN C + + + AF ++ K+G KP+TI++TT+I GL + A D A G
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ Y +I GL + A L
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLF 820
Score = 67.0 bits (162), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A L R PS+I +N ILT L K A+ + +M+ + P++ T NIL
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNIL 383
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C G++ AF + + K G PN T ++ LC + ++ A +E+ +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+++++ LI+GL KVG+ A ++
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKV 469
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 7 RWFHRNPTF----LLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLV 62
R F P F L FS++ +HS + + LF ++ ++ + P++ F ++
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAV-NHSDMM----LTLFQQMQELGYEPTVHLFTTLIRGFA 214
Query: 63 KTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
K A+SL +M+ + DIV N+ I+ + +G++ +A+ +I G KP+ +
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
T+T++I LC +++ A++ + L +Y +I G G+ A LL
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 67/143 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A LF R +++ ++ ++ K A + ++ +G+ P++ T N L
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ +++ A + + PN +T+ LI GLC + +A F E+ QG+
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ + +SY +I+GL K G A
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEA 781
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 61/123 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ L + A L M+ G+ P++ T+NI+++ C ++ A ++
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ + P+ ITF +LI GL +V A + ++++L + N + Y LI
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 169 VGQ 171
G+
Sbjct: 495 HGR 497
Score = 50.1 bits (118), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 68/136 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+A+ F + +++ TP+ + + ++ L K + ++ A +M+ +G+ P ++ +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G ++ A ++ + G P++ + +I+GL ++ A +E +G+
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Query: 153 QLNQVSYGILINGLCK 168
++ + +L++ L K
Sbjct: 829 PIHNKTCVVLLDTLHK 844
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD+ LN ++C G+ ++ +I R + P+ +++ LI GL +
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ QG L+ +Y I+I+G CK G+ A +LL
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Query: 26 SHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPD 85
+H R D ++ ++ +P + N + + K ++ +++ R +PD
Sbjct: 494 NHGRK--EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
+ +ILI+ G + + + + ++G +T + +I G C +V +A Q +
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ +G + V+YG +I+GL K+ + A L
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 65/110 (59%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A+ +M +G+ D+V+ +ILI+ G + A +L K++K G +PN IT+T +I+
Sbjct: 261 ALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIR 320
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
GLC +++ A + +L+ GI++++ Y LI+G+C+ G A +L
Sbjct: 321 GLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML 370
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF+ L + PS + + ++ L K + A L M +G++P+I+ N ++
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC LGQ A V+++ + P+ T +++IKG C ++ AL E + I
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
+ + LI G C G+ A LLR
Sbjct: 828 ADFFGFLFLIKGFCTKGRMEEARGLLR 854
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 66/125 (52%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
++ ++ ++ L K + A+ L +M G+ P+++T +I C +G++ AF +
Sbjct: 277 VVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFN 336
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+IL G + + + TLI G+C + RA ++ +GIQ + ++Y +INGLC G
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 171 QTRAA 175
+ A
Sbjct: 397 RVSEA 401
Score = 63.9 bits (154), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
+I++ I+ L K A++L + RG+ + +T N LIN C G + A +
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+ G P+ +T+ LI LC A + D ++++G+ N + Y +++G CK+G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 171 QTRAALRLL 179
QT A+R++
Sbjct: 775 QTEDAMRVV 783
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%)
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D++ I+IN C G + A ++ + RG NTIT+ +LI GLC + AL+
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
D L G+ ++V+YGILI+ LCK G A +LL
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLL 748
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
+I ++ +L +K ++ + + + I D+V NIL+ + +G A ++
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+ + P+T T+ T+IKG C Q++ AL+ +EL + V Y +I+ LCK G
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKG 530
Query: 171 QTRAALRLL 179
A +L
Sbjct: 531 MLDTATEVL 539
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%)
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
++P++VT L++ C LG++ ++ ++ G++ + + ++ I G + AL
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E++ +G+ + VSY ILI+GL K G AL LL
Sbjct: 263 MQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLL 300
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 65/131 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ + +++ L + L ++E G D V + I+ Y G + A
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+++++G + ++++ LI GL V+ AL +++ +G++ N ++Y +I GLCK
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 169 VGQTRAALRLL 179
+G+ A L
Sbjct: 325 MGKLEEAFVLF 335
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 60/132 (45%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
T + I +N ++ L + A+ L +E G++P VT ILI+ C G A
Sbjct: 687 TLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEK 746
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L ++ +G PN I + +++ G C Q + A++ + + + + +I G C
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 168 KVGQTRAALRLL 179
K G AL +
Sbjct: 807 KKGDMEEALSVF 818
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LFNR+L + + ++ + + + + A S+ ME RGI P I+T N +I
Sbjct: 330 EAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVI 389
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C G++S A V +G + IT++TL+ + L+ L I
Sbjct: 390 NGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIP 444
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
++ V IL+ +G A L R
Sbjct: 445 MDLVMCNILLKAFLLMGAYGEADALYR 471
Score = 46.6 bits (109), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 50/115 (43%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L + ++ P+II +N I+ K A+ + + + PD T++ +I
Sbjct: 743 DAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMI 802
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
YC G M A SV + + + F LIKG C +++ A E+L
Sbjct: 803 KGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNILINCYCHLGQMSVAFS 107
P+ FN ++ + + + +ME G P++ + N+L+ YC G MS A
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
V ++ RG + + + T+I GLC N +V +A + ++ +GI+ ++Y L+NG C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 168 KVGQTRAALRLLR 180
K G + L + R
Sbjct: 363 KAGDVDSGLVVYR 375
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 56/120 (46%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P++ +N ++ S A + +M+ RG++ DIV N +I C ++ A
Sbjct: 278 SPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKE 337
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ + +G + +T+ L+ G C V L + E+ +G + + ++ L+ GLC
Sbjct: 338 LFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNI 91
++A L L + P +N +L L K K + +M + + PD+V+ I
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI+ C+ + A +++K+ G+KP+ + T++KG C + A+ + ++ +G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ +Q++Y LI GL K G+ A L+
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ F ++ + +K+ A+ L ++ G PD N ++ +C L + S A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K+ + G +P+ IT+ TLI GL +V+ A + ++ G + + +Y L+NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 169 VG 170
G
Sbjct: 348 KG 349
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ L ++L P +N I+ S A+ + +M+ G+ PD +T N LI
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLC 132
G++ A L ++ GY+P+T T+T+L+ G+C
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G+ PD VT +I + C G++ A ++ ++ ++ P+T T+ L+K LC +
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 141 LQFHDELLAQ-GIQLNQVSYGILINGLCKVGQTRAALRLL 179
+F DE+ ++ + VS+ ILI+ +C R A+ L+
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLV 253
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F+ +L+ ++ +N +L L K+ + +M G+ PD + I I+ YC
Sbjct: 230 VFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYC 289
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A+ VL ++ + PN TF +IK LC N++V A DE++ +G +
Sbjct: 290 DAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTW 349
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+Y ++ C + A +LL
Sbjct: 350 TYNSIMAYHCDHCEVNRATKLL 371
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 24 LHSHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
++SR+ LP++A FNR+++ P + + +++L L KH + A + + GI
Sbjct: 145 FRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGI 204
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
+P T +IL+ + + S A V ++L+R + + + L+ LC + V +
Sbjct: 205 VPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYK 264
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
E+ G++ + S+ I I+ C G +A ++L
Sbjct: 265 MFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%)
Query: 27 HSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI 86
+ + +DA +F+ + +P+ + + +++ L + A L ++M+ G PD
Sbjct: 209 YKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDS 268
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
V N L++ +C LG+M AF +L K G+ +++LI GL + +A + +
Sbjct: 269 VAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYAN 328
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+L + I+ + + Y ILI GL K G+ AL+LL
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTK-HYSIAISLSHQMEFRGIMPDIVT 88
+ AV F R+ + P + +N IL +++ + + +A ++ ++M P++ T
Sbjct: 141 GMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYT 200
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
IL++ G+ S A + + RG PN +T+T LI GLC A + E+
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G + V++ L++G CK+G+ A LLR
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L+ +L+ P II + ++ L K A+ L M +GI PD N +I
Sbjct: 322 AFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIK 381
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G + S+ ++ + P+ T T LI +C N V+ A + E+ G
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSP 441
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ ++ LI+GLCK G+ + A LL
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLL 466
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L +A +F + + +PS+ FN ++ L K+ A L H+ME + L
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 90 ----NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
N + G + A+ LA G P+ +++ LI G C + AL+ +
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
L +G+ + V+Y LINGL +VG+ A +L
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 70.9 bits (172), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 64/122 (52%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N L K A L +M+ RGI+PD++ LI+ YC G++ A ++ +++
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
G P+ IT+ L+ GL N + L+ ++ + A+G + N V+ ++I GLC + +
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 174 AA 175
A
Sbjct: 511 EA 512
Score = 67.4 bits (163), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 78 EFR--GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
EFR I D V N+ + LG++ AF +L ++ RG P+ I +TTLI G CL
Sbjct: 378 EFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQG 437
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+V AL DE++ G+ + ++Y +L++GL + G L +
Sbjct: 438 KVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEI 480
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 56 KILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKR 115
K++ K + A L M RG++PD+ T I+I+ YC L ++ A S+ + +R
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Query: 116 GYKPNTITFTTLI-KGLCLNDQ------------VKRALQFHDELLAQGIQLNQVSYGIL 162
G KP+ +T+T L+ + L L+ + ++A + E A GI L+ V Y +L
Sbjct: 656 GIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVL 715
Query: 163 INGLCKVGQTRAALRLL 179
I+ CK+ A L
Sbjct: 716 IDRQCKMNNLEQAAELF 732
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 39 FNRLLQMRH---TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
F L +M+ P +I + ++ A+ L +M G+ PD++T N+L++
Sbjct: 408 FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSG 467
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
G + ++ G KPN +T + +I+GLC +VK A F L Q N
Sbjct: 468 LARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSS-LEQKCPEN 526
Query: 156 QVSYGILINGLCKVGQTRAALR 177
+ S+ + G C+ G ++ A +
Sbjct: 527 KASF---VKGYCEAGLSKKAYK 545
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+ +++ P + + ++ + A SL M+ RGI PD+VT +L+
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Query: 94 NCYCHL-----------GQMS--VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
+ Y L G++ A VL + G + + +T LI C + +++A
Sbjct: 669 DRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQA 728
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ D ++ G++ + V+Y LI+ + G A+ L+
Sbjct: 729 AELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLV 767
Score = 47.0 bits (110), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 49/105 (46%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+ME G D+ +I+ YC + A L K+L +G K N + + +++ C D
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
AL+ E I L++V Y + + L K+G+ A LL+
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQ 412
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 70.9 bits (172), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +++ + +++ TP++ FN ++ L +A+ ++ G++PD T N +I
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
YC G++ AF + +K +KP+ T L+ GLC ++AL F + L+ + ++
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EV 623
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ V+Y +I+ CK + + A LL
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLL 648
Score = 70.1 bits (170), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Query: 34 DAVCLFNRLL-QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA+ + R++ + + P + +N IL + K S L M+ G++P+ VT N L
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ YC LG + AF ++ + + P+ T+ LI GLC ++ L+ D + + +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
Q + V+Y LI+G ++G + A +L+
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLM 368
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 64/128 (50%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
+ + ++ + + A+ + +M+ I P + T N LI CH G+ +A +
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ + G P+ TF ++I G C +V++A +F++E + + + + IL+NGLCK G
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 172 TRAALRLL 179
T AL
Sbjct: 607 TEKALNFF 614
Score = 67.4 bits (163), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 70/129 (54%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P I+ ++ ++ +K S A+ + +M +GI + +TLN +++ C ++ A +
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L KRG+ + +T+ TLI G ++V++AL+ DE+ I ++ LI GLC
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 168 KVGQTRAAL 176
G+T A+
Sbjct: 533 HHGKTELAM 541
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 45/190 (23%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR------GIMPD 85
P+ A+ +F ++++++ P+++ N +L LV+ Y + S+S E G+ +
Sbjct: 147 PHVALQIFQKMIRLKLKPNLLTCNTLLIGLVR---YPSSFSISSAREVFDDMVKIGVSLN 203
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKIL-------------------------------- 113
+ T N+L+N YC G++ A +L +++
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 114 ----KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
K G PN +T+ L+ G C +K A Q + + + + +Y ILINGLC
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 170 GQTRAALRLL 179
G R L L+
Sbjct: 324 GSMREGLELM 333
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 65 KHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITF 124
K ++ + ++ G PDIVT + LI Y +G +S A ++ ++ ++G K NTIT
Sbjct: 395 KREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454
Query: 125 TTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
T++ LC ++ A + +G +++V+YG LI G + + AL +
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 57 ILTPLVKTKHYSIAI--SLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
+L ++T S+++ SL H P +I ++ Y H G+ VA + K+++
Sbjct: 100 LLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIR 159
Query: 115 RGYKPNTITFTTLIKGLCL---NDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
KPN +T TL+ GL + + A + D+++ G+ LN ++ +L+NG C G+
Sbjct: 160 LKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK 219
Query: 172 TRAALRLL 179
AL +L
Sbjct: 220 LEDALGML 227
Score = 50.1 bits (118), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + + ++ P ++ +N ++ + A L QME G+ + VT NI + C
Sbjct: 332 LMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLC 391
Query: 98 -HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
+ +V V + G+ P+ +T+ TLIK + AL+ E+ +GI++N
Sbjct: 392 KEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNT 451
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
++ +++ LCK + A LL
Sbjct: 452 ITLNTILDALCKERKLDEAHNLL 474
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ L + L M+ + PD+VT N LI+ LG A +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL-AQGIQLNQVSYGILINGLC 167
+ ++ G K N +T +K LC ++ + + EL+ G + V+Y LI
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 168 KVGQTRAALRLLR 180
KVG AL ++R
Sbjct: 428 KVGDLSGALEMMR 440
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 70.1 bits (170), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P AV LFN+++Q+ +P+++ + ++ V A ++ +++ G+ PDIV N+
Sbjct: 263 PQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNL 322
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN---DQVKRALQFHDELL 148
+I+ Y LG+ A V + KR P+ TF +++ LCL+ D V R
Sbjct: 323 MIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITH------ 376
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
G + V+ +L N K+G AL++L
Sbjct: 377 GIGTDFDLVTGNLLSNCFSKIGYNSYALKVL 407
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 24 LHSHSR-SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+H+++R +A +F L + + P F IL+ L + + + ++H + G
Sbjct: 324 IHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GT 380
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
D+VT N+L NC+ +G S A VL+ + + + + T+T + LC + A++
Sbjct: 381 DFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIK 440
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ ++ + L+ + +I+ L ++G+ A+ L +
Sbjct: 441 MYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFK 478
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 69.7 bits (169), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A LF+ L PSI+ +N ++ L ++ + A L +M + I PD++T L+
Sbjct: 392 EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG-LCLNDQVKRALQFHDELLAQGI 152
+ G +S+A V ++L++G KP+ +TT G L L D +A + H+E++A
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS-DKAFRLHEEMVATDH 510
Query: 153 QLNQVS-YGILINGLCKVGQTRAALRLLR 180
++ Y + I+GLCKVG A+ R
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 35 AVCLFNR------LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
A+C F R LL P ++ +N ++ +K + A L + I P IVT
Sbjct: 352 ALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N LI+ C G + A + ++ + P+ IT+TTL+KG N + A + +DE+L
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+GI+ + +Y G ++G + A RL
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 69/133 (51%)
Query: 47 HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
H P + +N + L K + AI ++ G++PD VT +I Y GQ +A
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
++ ++L++ P+ IT+ LI G ++++A Q+ E+ +G++ N +++ L+ G+
Sbjct: 571 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630
Query: 167 CKVGQTRAALRLL 179
CK G A R L
Sbjct: 631 CKAGNIDEAYRYL 643
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 70/136 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L++ +L+ R PS+I + ++ K A S +M+ RG+ P+++T N L+ C
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 631
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A+ L K+ + G PN ++T LI C ++ + ++ + E+L + I+ +
Sbjct: 632 KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 691
Query: 158 SYGILINGLCKVGQTR 173
++ L L K ++R
Sbjct: 692 THRALFKHLEKDHESR 707
Score = 60.1 bits (144), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 69/142 (48%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+S+ + F ++++ PS+ N +L L ++ + A ++ M GIMP ++T
Sbjct: 181 KSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVIT 240
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N +++ G + + ++ +R + + +T+ LI G N +++ A +FH ++
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 149 AQGIQLNQVSYGILINGLCKVG 170
G + S+ LI G CK G
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQG 322
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 71/140 (50%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
++ ++ P + + ++ ++ + +A +L +M + + P ++T +LI + G
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ AF ++ KRG +PN +T L+ G+C + A ++ ++ +GI N+ SY
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659
Query: 161 ILINGLCKVGQTRAALRLLR 180
+LI+ C + ++L +
Sbjct: 660 MLISKNCDFEKWEEVVKLYK 679
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 63/147 (42%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A ++ +++ P++I FN +L K + +M+ R I VT NIL
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN + G+M A + + G+ +F LI+G C A DE+L GI
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+Y I I LC G+ A LL
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELL 366
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 51/103 (49%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
+M +G +P + NI++ M+ A +V +++ G P ITF T++
Sbjct: 193 KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 252
Query: 136 QVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
++R + E+ + I+ ++V+Y ILING K G+ A R
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
+ L++ P +I ++ +L L K ++ A +L +M + PD V NI I+ +C
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
G++S AF VL + K+G + T+ +LI GL + +Q+ DE+ +GI N +Y
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 160 GILINGLCKVGQTRAALRLL 179
I LC+ + A LL
Sbjct: 633 NTAIQYLCEGEKVEDATNLL 652
Score = 67.4 bits (163), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 74/150 (49%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L DA LF + + S+ +N L LV+ + A ++ QM +GI P I + N
Sbjct: 306 LLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN 365
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
IL++ C LG +S A +++ + + G P+ +T+ L+ G C +V A E++
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
N + IL++ L K+G+ A LLR
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 70/132 (53%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PSI +N ++ L K S A ++ M+ G+ PD VT L++ YC +G++ A S+
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++++ PN T L+ L ++ A + ++ +G L+ V+ I+++GLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 169 VGQTRAALRLLR 180
G+ A+ +++
Sbjct: 479 SGELDKAIEIVK 490
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 58/123 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS+ +N +L +K + L M GI P T N+LI C + A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ ++G KPN TF L++G C + L+ + + + G+ N+V Y +++ C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 169 VGQ 171
G+
Sbjct: 230 EGR 232
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A L +++ P+ N +L L K S A L +M +G D VT NI+++
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 95 CYCHLGQMSVAFSVLAKILKRGYK-----------------------PNTITFTTLIKGL 131
C G++ A ++ + G P+ IT++TL+ GL
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
C + A E++ + +Q + V+Y I I+ CK G+ +A R+L+
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ + + P+ F ++ K + L + ME G++P+ V N +++ +C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ-FHDELLAQGIQL-- 154
G+ + ++ K+ + G P+ +TF + I LC +V A + F D L + + L
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 155 -NQVSYGILINGLCKVG 170
N ++Y +++ G CKVG
Sbjct: 289 PNSITYNLMLKGFCKVG 305
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 116 GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
G P T TF LI+ LC + V A + DE+ +G + N+ ++GIL+ G CK G T
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 176 LRLL 179
L LL
Sbjct: 202 LELL 205
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P FN ++ L + A L +M +G P+ T IL+ YC G +
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + G PN + + T++ C + + + +++ +G+ + V++ I+ LCK
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 169 VGQTRAALRLL 179
G+ A R+
Sbjct: 265 EGKVLDASRIF 275
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 60/132 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ I +N +L K A +L + + + + NI + G+ A +V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ +G P+ ++ L+ GLC + A + G+ + V+YG L++G C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 169 VGQTRAALRLLR 180
VG+ AA LL+
Sbjct: 409 VGKVDAAKSLLQ 420
Score = 47.0 bits (110), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIA-------ISLSHQMEFRGIMPDI 86
DA L + ++Q P++ F ++ K + +A +S+ Q E G+
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE--GLY--- 701
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
+++ N GQ+ A +L +L RG++ T + L++ LC D+++ A +
Sbjct: 702 ---SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAA 175
++ +G + + +I+GL K+G + A
Sbjct: 759 MIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 66/126 (52%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
F+ ++ L K + ++ M +G P++ +LI+ Y G + A +L +++
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
G+KP+ +T++ ++ GLC N +V+ AL + G+ +N + Y LI+GL K G+
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 174 AALRLL 179
A RL
Sbjct: 450 EAERLF 455
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 62/123 (50%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ +N ++ LV A + ME I PDIVT N +I YC GQ A
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 279
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + RG++ + IT+ T+I+ + + + E+ +GIQ+ ++ ++I GLCK
Sbjct: 280 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 339
Query: 169 VGQ 171
G+
Sbjct: 340 EGK 342
Score = 66.6 bits (161), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 67/130 (51%)
Query: 47 HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
H I + ++ + ++L +M+ +GI +++I C G+++ +
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+V ++++G KPN +T LI G + V+ A++ ++ +G + + V+Y +++NGL
Sbjct: 348 TVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGL 407
Query: 167 CKVGQTRAAL 176
CK G+ AL
Sbjct: 408 CKNGRVEEAL 417
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 68/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N+ +F +++ P++ + ++ K+ AI L H+M G PD+VT +++
Sbjct: 344 NEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVV 403
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N C G++ A G N++ +++LI GL +V A + +E+ +G
Sbjct: 404 VNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ Y LI+ K + A+ L +
Sbjct: 464 TRDSYCYNALIDAFTKHRKVDEAIALFK 491
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNI 91
++A LF + + T +N ++ K + AI+L +ME G + T I
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTI 508
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L++ + A + ++ +G P F L GLCL+ +V RA + DEL G
Sbjct: 509 LLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMG 568
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
+ L+ +IN LCK G+ + A +L
Sbjct: 569 VILDAACED-MINTLCKAGRIKEACKL 594
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 67/123 (54%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ L K +A+ + +G++P+ ++ LI YC + +A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ +RG KP+ +T+ LI GL ++ + A+ +L+ +G+ + Y +L++GLCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 169 VGQ 171
G+
Sbjct: 463 TGR 465
Score = 67.0 bits (162), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ + + ++ K+K Y IA L QM RG PDIVT ILI+ G M A ++
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
K++ RG P+ + L+ GLC + A E+L + I + Y LI+G +
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 169 VGQTRAALRLL 179
G A ++
Sbjct: 498 SGDFDEARKVF 508
Score = 64.3 bits (155), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 24 LHSHSRSLP-NDAVCLFNRLLQMRHT-PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
LH+++ S + AV +++ ++++ + P +I N +L+ LVK++ A + +M RG
Sbjct: 141 LHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRG 200
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
D + IL+ C+ G++ V ++ +G PN + + T+I G C ++ A
Sbjct: 201 DSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAY 260
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
EL +G ++G +ING CK G A+ RLL
Sbjct: 261 LVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ NR+ + P ++ I+ VK + + AI + ME P++VT L
Sbjct: 537 DEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSL 596
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCL-NDQVKRALQFHDELLAQG 151
IN +C G +A ++ R PN +T+TTLI+ L + +++A+ + + ++
Sbjct: 597 INGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNK 656
Query: 152 IQLNQVSYGILINGLCK 168
N+V++ L+ G K
Sbjct: 657 CVPNEVTFNCLLQGFVK 673
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD+ T NILIN C G+ VA L + K+G PN +++ LI+ C + + A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 144 HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
++ +G + + V+YGILI+GL G A+ +
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 42 LLQMRH---TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
LLQM P I+ + ++ LV + H A+++ ++ RG+ PD N+L++ C
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
G+ A + +++L R P+ + TLI G + A + + +G++++ V
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 159 YGILINGLCKVGQTRAAL 176
+ +I G C+ G AL
Sbjct: 523 HNAMIKGFCRSGMLDEAL 540
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 70/148 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DAV + +L+ +P +N +++ L KT + A L +M R I+PD L
Sbjct: 432 DDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + G A V + +++G K + + +IKG C + + AL + + + +
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
++ +Y +I+G K A+++ R
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
++ N ++ ++ A++ ++M ++PD T + +I+ Y M+ A +
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+ K KPN +T+T+LI G C K A + E+ + + N V+Y LI L K
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 171 QT 172
T
Sbjct: 640 ST 641
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 35/166 (21%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I+ +N I+ K A + +++ +G MP + T +IN +C G + +
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 109 LAKILKRGY-----------------------------------KPNTITFTTLIKGLCL 133
L+++ +RG KP+ T+ LI LC
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 134 NDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + A+ F DE +G+ N +SY LI CK + A +LL
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Query: 19 MPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME 78
M S L R LP A LF+ +L P + ++ +++ + A +
Sbjct: 455 MLMSGLCKTGRFLP--AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512
Query: 79 FRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVK 138
+G+ D+V N +I +C G + A + + ++ + P+ T++T+I G +
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572
Query: 139 RALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
A++ + + N V+Y LING C G + A
Sbjct: 573 TAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 35/135 (25%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
+G +P+IV N +I YC LG + A+ V ++ +G+ P TF T+I G C
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 140 ALQFHDELLAQGIQ-----LNQV------------------------------SYGILIN 164
+ + E+ +G++ LN + +Y ILIN
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILIN 353
Query: 165 GLCKVGQTRAALRLL 179
LCK G+ A+ L
Sbjct: 354 RLCKEGKKEVAVGFL 368
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
QM+ G+ PDIV L++ Y H G+M+ A+ ++ + KRG++PN +T LI+ LC +
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE 320
Query: 136 Q-VKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+ + A++ E+ G + + V+Y LI+G CK G
Sbjct: 321 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Query: 13 PTFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKT-KHYSIAI 71
P ++ S ++H+ + DA L N + + P++ + ++ L +T K A+
Sbjct: 269 PDIVVFTNLLSGYAHAGKMA-DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAM 327
Query: 72 SLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
+ +ME G DIVT LI+ +C G + +SVL + K+G P+ +T+ ++
Sbjct: 328 RVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH 387
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+Q + L+ +++ +G + + Y ++I CK+G+ + A+RL
Sbjct: 388 EKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 434
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS + + +I+ K + + + L +M+ RG PD++ N++I C LG++ A +
Sbjct: 375 PSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 434
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
++ G P TF +I G + A E++++GI + YG L
Sbjct: 435 WNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI-FSAPQYGTL 487
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 69/147 (46%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A C+F L + P + + ++ + A L +M +G+ P+ N++I
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + G++S+ + ++L+ GY ++ T+IKG C + + A + + G+
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y LI G CK + L+L +
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYK 447
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 66/129 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L+ +++ P+ +N ++ K S+ + ++M G +++ N +I +C
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC 399
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+ AF + + + G PN IT+ LIKG C ++V++ L+ + EL A G++ + +
Sbjct: 400 SHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGM 459
Query: 158 SYGILINGL 166
+Y L+ L
Sbjct: 460 AYAALVRNL 468
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
++ H PS+ + KI+ L K A + ++ +G PD V +I +C G
Sbjct: 274 MIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGW 333
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
+ A + +++K+G +PN + +I G ++ F++E+L G +S
Sbjct: 334 LGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNT 393
Query: 162 LINGLCKVGQTRAALRLLR 180
+I G C G++ A + +
Sbjct: 394 MIKGFCSHGKSDEAFEIFK 412
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 63/134 (47%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + L+ P + K+++ + +Y+ + H M P + +I C
Sbjct: 235 LLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC 294
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A+ + + +GY P+ + +TT+I+G C + A + E++ +G++ N+
Sbjct: 295 MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEF 354
Query: 158 SYGILINGLCKVGQ 171
+Y ++I+G K G+
Sbjct: 355 AYNVMIHGHFKRGE 368
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 24 LHSHSR-SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
L H R S P+ + ++ R ++ ++ ++ + + A L +M +G+
Sbjct: 297 LKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGM 356
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
+ ++VT LI + G SVA +L ++ + G P+ I +TT++ LC + V +A
Sbjct: 357 VMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYG 416
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++++ I + +SY LI+GLC+ G+ A++L
Sbjct: 417 VFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I FN L L + A+ M RG PD+V+ ILIN G+++ A +
Sbjct: 112 PDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF-HDELLAQGIQLNQVSYGILINGLC 167
+++ G P+ L+ GLC +V A + +E+ + ++L+ V Y LI+G C
Sbjct: 172 WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFC 231
Query: 168 KVGQTRAALRL 178
K G+ A L
Sbjct: 232 KAGRIEKAEAL 242
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 64/126 (50%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+++ ++ L K K + + +L ME G +PDI N+ ++ C ++ A ++
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+RG +P+ +++T LI GL +V A++ + ++ G+ + + L+ GLC +
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 174 AALRLL 179
A ++
Sbjct: 202 LAYEMV 207
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 72/141 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + Q +++ + ++ ++ + S+A L QM G+ PD + +++ C
Sbjct: 347 LFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLC 406
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A+ V +++ P+ I++ +LI GLC + +V A++ +++ + +++
Sbjct: 407 KSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDEL 466
Query: 158 SYGILINGLCKVGQTRAALRL 178
++ +I GL + + AA ++
Sbjct: 467 TFKFIIGGLIRGKKLSAAYKV 487
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L +++ ++ +P I + IL L K+ + A + + M I PD ++ N LI+ C
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+++ A + + + P+ +TF +I GL ++ A + D+++ +G L++
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRD 501
Query: 158 SYGILINGLC 167
LI C
Sbjct: 502 VSDTLIKASC 511
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 9/141 (6%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL---- 89
DAV ++N +++ +P NK LV ++ + L+++M I V L
Sbjct: 167 DAVEIWNAMIRSGVSPD----NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV 222
Query: 90 -NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
N LI+ +C G++ A ++ + + K G +P+ +T+ L+ N+ +KRA E++
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 149 AQGIQLNQVSYGILINGLCKV 169
GIQL+ SY L+ C+V
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRV 303
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 33 NDAVCLFNRLLQMRHTPSII---EFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
++AV +F+ +MRH+ + ++N+ + LV+ + +A ++ M+ G T
Sbjct: 26 DNAVQVFD---EMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTY 82
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+ I+ C + + + ++L+ + G+ P+ F + LC ++V A+Q ++
Sbjct: 83 SRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQ 142
Query: 150 QGIQLNQVSYGILINGLCKVGQTRAALRL 178
+G + + VSY ILINGL + G+ A+ +
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEI 171
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV F ++Q P ++ + ++ L + + A+ + + M G+ PD L+
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 95 CYCHLGQMSVAFSVLAKILKRG-YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
CH ++ +A+ ++A+ +K K +T+ + LI G C ++++A + G +
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCE 252
Query: 154 LNQVSYGILIN 164
+ V+Y +L+N
Sbjct: 253 PDLVTYNVLLN 263
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 35/165 (21%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S + +N +++ K A +L M G PD+VT N+L+N Y + A V+
Sbjct: 219 STVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278
Query: 110 AKILKRG-----YKPN------------------------------TITFTTLIKGLCLN 134
A++++ G Y N ++++TLI+ C
Sbjct: 279 AEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRA 338
Query: 135 DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
++A + +E+ +G+ +N V+Y LI + G + A +LL
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Query: 22 SSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
S+L R+L +A LF L Q P +N +L VKT A S+ +ME RG
Sbjct: 312 SALADSGRTL--EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
+ PD T ++LI+ Y + G+ A VL ++ +PN+ F+ L+ G + ++
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCK 168
Q E+ + G++ ++ Y ++I+ K
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ F+R+L P + +N ++ K + +A + ME RG +P T NI+IN
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
Y + +L K+ +G PN +T TTL+ + + A++ +E+ + G++
Sbjct: 523 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ Y LIN + G + A+ R
Sbjct: 583 SSTMYNALINAYAQRGLSEQAVNAFR 608
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 71/140 (50%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA+ + + PS +N ++ + A++ M G+ P ++ LN L
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN + + + AF+VL + + G KP+ +T+TTL+K L D+ ++ ++E++ G
Sbjct: 626 INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGC 685
Query: 153 QLNQVSYGILINGLCKVGQT 172
+ ++ + +L + L + QT
Sbjct: 686 KPDRKARSMLRSALRYMKQT 705
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P D L +MR E K+ L K A+ L Q++ + MPD+V
Sbjct: 178 PEDPKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTA 237
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQV-KRALQFHDELLAQ 150
++ Y + GQ V ++L G PN T++ LIKGL + + K A ++ E++
Sbjct: 238 IVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGN 297
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ N +Y + + G+ +A LL+
Sbjct: 298 GMSPNAATYTAVFEAFVREGKEESARELLQ 327
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNILI 93
A+ ++++++ +P + + ++ ++ + A+ + + E G+ ++VT N LI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N Y +G + VL + +RG N +T+T+LIKG C ++ A + L + +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
+Q YG+L++G C+ GQ R A+R+
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRV 353
Score = 67.0 bits (162), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Query: 34 DAVCLFNRLLQM-RHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
DA LF+ LL R P + ++ + A +L +M +GI+P+IVT N L
Sbjct: 737 DARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNAL 796
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C LG + A +L K+ ++G PN IT+ TLI GL + V A++ ++++ +G+
Sbjct: 797 IKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISL-SHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
P+ I +N + L K A L S + +PD T ILI+ G ++ AF+
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ ++ +G PN +T+ LIKGLC V RA + +L +GI N ++Y LI+GL
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 168 KVGQTRAALRL 178
K G A+RL
Sbjct: 837 KSGNVAEAMRL 847
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 75/146 (51%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F+R+ P +N ++ + + A+ L QM + ++P ++T NIL+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
Y +G S+ +LKRG + I+ +TL++ L A++ + +LA+G+
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ ++ ++I+GLCK+ + A +L
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEIL 529
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 65 KHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG-YKPNTIT 123
K IA S+ + + ++P+ + N+ I C G++ A + + +L + P+ T
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 124 FTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+T LI G + + +A DE+ +GI N V+Y LI GLCK+G A RLL
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 68/144 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ L +++ Q P+++ +N +L + + +SL M RG+ D ++ + L
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 477
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ LG + A + +L RG +TIT +I GLC ++V A + D +
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 153 QLNQVSYGILINGLCKVGQTRAAL 176
+ +Y L +G KVG + A
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAF 561
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 63 KTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
+T A+ + M G+ + N LIN YC GQ+ A + +++ KP+
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
T+ TL+ G C V AL+ D++ + + ++Y IL+ G ++G L L +
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 35/178 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D + L+ +L+ I + +L L K ++ A+ L + RG++ D +TLN++
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 93 INCYCHL-----------------------------------GQMSVAFSVLAKILKRGY 117
I+ C + G + AF+V + ++G
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 118 KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
P + TLI G + + EL A+G+ +YG LI G C +G A
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 65/145 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DAV + + ++++ + N ++ K+ A + +M + PD T N L+
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC G + A + ++ ++ P +T+ L+KG L +L +G+
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
+++S L+ L K+G A++L
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKL 493
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA LF + +MR ++ F +L + A + QM G PDIV L+
Sbjct: 236 DAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLL 294
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + G+M+ A+ +L + +RG++PN +T LI+ LC D+++ A++ E+ +
Sbjct: 295 SGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECE 354
Query: 154 LNQVSYGILINGLCKVGQ 171
+ V+Y L++G CK G+
Sbjct: 355 ADVVTYTALVSGFCKWGK 372
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 42 LLQMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
L+QM P I+++ +L+ + A L M RG P+ +LI C
Sbjct: 275 LVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCK 334
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
+ +M A V ++ + + + +T+T L+ G C ++ + D+++ +G+ ++++
Sbjct: 335 VDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELT 394
Query: 159 Y 159
Y
Sbjct: 395 Y 395
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP-DI 86
S + A+ + + + + P F +L L K A L M R P ++
Sbjct: 195 SADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR--FPVNL 252
Query: 87 VTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDE 146
L+ +C +G+M A VL ++ + G++P+ + +T L+ G ++ A +
Sbjct: 253 RYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRD 312
Query: 147 LLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +G + N Y +LI LCKV + A+++
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVF 345
Score = 46.6 bits (109), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 67/145 (46%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L + + P+ + ++ L K A+ + +ME D+VT L+
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +C G++ + VL ++K+G P+ +T+ ++ + + L+ +++
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
+ Y ++I CK+G+ + A+RL
Sbjct: 425 PDIGIYNVVIRLACKLGEVKEAVRL 449
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS FN IL LV K + + G+ D LNILI C G + A +
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + ++ +PN +TF+ LI+G C + + A + + + + I+ + +++ ILI+GL K
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 169 VGQTRAALRLLR 180
G+ + LL
Sbjct: 285 KGRVEEGIDLLE 296
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 68/135 (50%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ L + Q + P+++ F+ ++ + A L +ME I PD +T NILI+
Sbjct: 221 ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILIS 280
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
G++ +L ++ +G +PN T+ ++ GL + A + ++++ G++
Sbjct: 281 GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRP 340
Query: 155 NQVSYGILINGLCKV 169
+ +SY ++ GLC+
Sbjct: 341 SFLSYKKMVLGLCET 355
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%)
Query: 55 NKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILK 114
N ++ L ++ + A+ L + + P+++T + LI +C+ G+ AF +L ++ K
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 115 RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+P+TITF LI GL +V+ + + + +G + N +Y ++ GL
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 72/142 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++ ++ + P + +N+I+ LVK ++ +A+++ + G++ + T IL+ C
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G++ +L ++ + KP+ +T +IK L + +L+ DE+ I+ + +
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+YG L+ GLCK G+ L
Sbjct: 335 AYGTLVVGLCKDGRVERGYELF 356
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N L + H+ A L M+ +G P ILI + + + V K+
Sbjct: 161 YNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK 220
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
K G+KP + ++ L N AL +++ G+ ++ IL+ GLCK G+
Sbjct: 221 KFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIE 280
Query: 174 AALRLLR 180
L +L+
Sbjct: 281 EMLEILQ 287
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ N + Q + P++I +N ++ L K + S AI +QM + +PDIVT N ++
Sbjct: 336 ILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMS 395
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + A +L + P IT+ ++I GL +K+AL+ + ++L GI + +
Sbjct: 396 KEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDI 455
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+ LI G C+ A ++L+
Sbjct: 456 TRRSLIYGFCRANLVEEAGQVLK 478
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+C+ ++ P I +N I+ L K H A+ L M G PD++T N +
Sbjct: 156 DKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTV 215
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G A L+ G P IT+T L++ +C RA++ +++ +G
Sbjct: 216 IRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGC 275
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y L+N C+ G +++
Sbjct: 276 YPDIVTYNSLVNYNCRRGNLEEVASVIQ 303
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
+ +DA+ L L P +I +N ++ L K A+ L HQM GI PD +T
Sbjct: 397 EGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDIT 456
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
LI +C + A VL + RG T+ +I+GLC +++ A++ + +L
Sbjct: 457 RRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIML 516
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAAL 176
G + ++ Y ++ G+ ++G A+
Sbjct: 517 TGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + LQ P +I + ++ + + + AI + M G PDIVT N L+N
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C G + SV+ IL G + NT+T+ TL+ LC ++ + + +
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 155 NQVSYGILINGLCKV 169
++Y ILINGLCK
Sbjct: 348 TVITYNILINGLCKA 362
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ F ++L+ + P I+ +N +L + K AI L ++ P ++T N +I+
Sbjct: 368 AIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
G M A + ++L G P+ IT +LI G C + V+ A Q E +G +
Sbjct: 428 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 487
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+Y ++I GLCK + A+ ++
Sbjct: 488 RGSTYRLVIQGLCKKKEIEMAIEVVE 513
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA L + + P + ++ L + A+ + M G +PD +T N++I
Sbjct: 122 DACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMII 181
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G + A +L + G P+ IT+ T+I+ + ++A++F + L G
Sbjct: 182 GNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCP 241
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
++Y +L+ +C+ + A+ +L
Sbjct: 242 PFMITYTVLVELVCRYCGSARAIEVLE 268
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNI 91
+DA+ LF+ +++ + P+ + F ++ L K A+ + H M + G+ P +
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI C +G++S AF + + + K + ++TLI L + +E+ +G
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ + V+Y +LING C + +A R+L
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVL 316
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 84 PDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
PD T NILI+ G A + +++K+ KP +TF TLI GLC + +VK AL+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 144 -HDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
HD L G++ Y LI LC++G+ A +L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKL 245
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 65/126 (51%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ +++ L+K + + +M +G PD VT N+LIN +C A VL +++
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV 320
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
++G KP+ I++ ++ + + A +++ +G + +SY I+ +GLC+ Q
Sbjct: 321 EKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFE 380
Query: 174 AALRLL 179
A +L
Sbjct: 381 EAAVIL 386
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 2/150 (1%)
Query: 22 SSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
SSL RS N+ + + + P + +N ++ A + +M +G
Sbjct: 266 SSLIKAGRS--NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
+ PD+++ N+++ + + + A + + +RG P+T+++ + GLC Q + A
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAA 383
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
DE+L +G + + + LC+ G+
Sbjct: 384 VILDEMLFKGYKPRRDRLEGFLQKLCESGK 413
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 67.4 bits (163), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++ + + + ++ FN ++ K A+S+ ++M G+ P++V+ N++I+ C
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGAC 264
Query: 98 HLGQMSVAFSVLAKI-LKRG--YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
G M A +L K+ + G PN +T+ ++I G C ++ A + +++ G+
Sbjct: 265 KTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC 324
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N+ +YG L++ + G + ALRL
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRL 348
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG---IMPDIVTLN 90
+A+ +F R+L+ P+++ FN ++ KT A+ L +M + P+ VT N
Sbjct: 236 EALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYN 295
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+IN +C G++ +A + ++K G N T+ L+ AL+ DE+ ++
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G+ +N V Y ++ L G A+ +LR
Sbjct: 356 GLVVNTVIYNSIVYWLFMEGDIEGAMSVLR 385
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
++ L + + A+ Q+ + ++ DIV N L++ + +++ A +L +L +G
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQG 461
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+ I+F TLI G +++RAL+ +D ++ N V Y ++NGL K G AA
Sbjct: 462 LSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDI--VTLNILINCYCHLGQMSVAFSV 108
I+ +N +L +KT + A + +M+ + + VT NI+IN C G A V
Sbjct: 532 IVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEV 591
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
L +++RG P++IT+ TLI + ++ ++ HD L+ QG+ ++ Y
Sbjct: 592 LKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIY 642
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A + Q G + LN + C ++ ++ + V ++ GY N TF +I
Sbjct: 167 AYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIY 226
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
C ++ AL +L G+ N VS+ ++I+G CK G R AL+LL
Sbjct: 227 SFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLL 276
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +++ +++M T +++ +N I+ L K A ++ + ME + DIVT N L+N
Sbjct: 485 ALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLN 540
Query: 95 CYCHLGQMSVAFSVLAKILKR-GYKP-NTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
G + A +L+K+ K+ G K + +TF +I LC ++A + ++ +G+
Sbjct: 541 ESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGV 600
Query: 153 QLNQVSYGILINGLCK 168
+ ++YG LI K
Sbjct: 601 VPDSITYGTLITSFSK 616
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
+L ++A+ + + + + +N ++ +IA L +M+ G+ PD++T
Sbjct: 144 NLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITY 203
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
+IN YC+ G++ A+ + ++ K N++T++ +++G+C + ++RAL+ E+
Sbjct: 204 TSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEK 263
Query: 150 QG----IQLNQVSYGILINGLCKVGQTRAALRLL 179
+ I N V+Y ++I C+ + AL +L
Sbjct: 264 EDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVL 297
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRG----IMPDIVTLNILINCYCHLGQMSVAFS 107
+ +++IL + K+ A+ L +ME I P+ VT ++I +C ++ A
Sbjct: 236 VTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALL 295
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
VL ++ RG PN +T LI+G+ ND+ +AL +L+ + ++L VS
Sbjct: 296 VLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALS---KLIDKLVKLGGVS 343
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 44 QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS 103
++++ P + N+IL L + A ++E G D VT ILI C+ G +
Sbjct: 316 EVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIK 375
Query: 104 VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH-----DELLAQGIQLNQVS 158
A L++I+ +GYKP+ ++ ++ GL ++ L H DE+ G+ L+ +
Sbjct: 376 RAVLYLSEIMSKGYKPDVYSYNAILSGL-----FRKGLWQHTHCILDEMKENGMMLSLST 430
Query: 159 YGILINGLCKVGQTRAALRLL 179
+ I++ G CK Q A R++
Sbjct: 431 FKIMVTGYCKARQFEEAKRIV 451
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
LL + +I +N ++ + + K++ + +M+ RG++PD T N L++ Y
Sbjct: 900 LLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSAD 959
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
S + L+ ++ +G KPN + + LC N VK+AL + ++G L
Sbjct: 960 YSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLG 1013
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%)
Query: 25 HSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
H + + P A+ L N + ++ P +I F ++ L + + G P
Sbjct: 301 HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTP 360
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D+V ++I Y G++ A + ++ ++G PN T+ ++I+G C+ + K A
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL 420
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
E+ ++G N V Y L+N L G+ A +++
Sbjct: 421 KEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVK 456
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L D V F + + P +N IL L+ K Y + + QM G PD++T
Sbjct: 201 GLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTY 260
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
NI++ LG+ + +L +++K G+ P+ T+ L+ L ++ AL + +
Sbjct: 261 NIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMRE 320
Query: 150 QGIQLNQVSYGILINGLCKVGQTRA 174
G++ + + LI+GL + G+ A
Sbjct: 321 VGVEPGVIHFTTLIDGLSRAGKLEA 345
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++ ++L+ TP ++ +N ++ + L +M G PD+ T NIL++
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A ++L + + G +P I FTTLI GL +++ F DE + G + V
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
Y ++I G G+ A + +
Sbjct: 364 CYTVMITGYISGGELEKAEEMFK 386
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 53/104 (50%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP ++ + ++T + A + +M +G +P++ T N +I +C G+ A +
Sbjct: 359 TPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACA 418
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+L ++ RG PN + ++TL+ L +V A + +++ +G
Sbjct: 419 LLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Query: 9 FHRNPTFLLAMPFSSLH------SHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLV 62
FH+ F M S + S SR++ DA +F+++ + R P I + +L
Sbjct: 185 FHKMEEFGFKMESSDFNRMLDTLSKSRNV-GDAQKVFDKMKKKRFEPDIKSYTILLEGWG 243
Query: 63 KTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTI 122
+ + ++ +M+ G PD+V I+IN +C + A ++ +R KP+
Sbjct: 244 QELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPH 303
Query: 123 TFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
F +LI GL ++ AL+F + + G L +Y L+ C
Sbjct: 304 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYC 348
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A+ N + ++ PS++ + ++ L + + +M G PD+V +
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I Y G++ A + ++ +G PN T+ ++I+GLC+ + + A E+ ++G
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
N V Y L++ L K G+ A +++R
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIR 453
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
L AV F + + P +N IL L+ K Y + + QM G PD++T
Sbjct: 198 GLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTY 257
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
NIL+ LG+M + ++ + G+ P++ T+ L+ L ++ AL + +
Sbjct: 258 NILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKE 317
Query: 150 QGIQLNQVSYGILINGLCKVGQTRA 174
GI + + Y LI+GL + G A
Sbjct: 318 VGIDPSVLHYTTLIDGLSRAGNLEA 342
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
++ ++L+ +P ++ +N +L + L +M G PD T NIL++
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A + L + + G P+ + +TTLI GL ++ F DE++ G + + V
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
Y ++I G G+ A + R
Sbjct: 361 CYTVMITGYVVSGELDKAKEMFR 383
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 34 DAVCLFNRL-----------LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
D +C RL L+ R P+ + +N ++ + A + +M+ I
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
P++VT+N ++ C +++A + K G K N +T+ TLI C V++A+
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+++++L G + Y LI+GLC+V + A+R++
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 71/146 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + ++L+ +P + +++ L + + AI + +++ G D++ N+LI
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C + +L + K G KP++IT+ TLI + + + +++ G+
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+YG +I+ C VG+ AL+L +
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFK 640
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 22 SSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
SSL ++R+ N A + + L++ + FN +L+ L + S L +M+
Sbjct: 267 SSLCKNARA--NTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK 324
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG--------YKPNTITFTTLIKGLCL 133
I PD+VTL ILIN C ++ A V ++ RG K ++I F TLI GLC
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 134 NDQVKRALQFHDEL-LAQGIQLNQVSYGILINGLCKVGQTRAA 175
++K A + + L + N V+Y LI+G C+ G+ A
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
+R+ + P+++ N I+ + + ++A+ ME G+ ++VT LI+ C +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR---ALQFHDELLAQGIQLNQ 156
+ A K+L+ G P+ + LI GLC QV+R A++ ++L G L+
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC---QVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
++Y +LI C +L
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEML 569
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 44 QMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG-IMPDIVTLNILINCYCHL 99
QMR P++ + ++ A+ L M + P+ V NILIN + L
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND--QVKRALQFHDELLAQGIQLNQV 157
G A S+ ++ + +PN T+ L K CLN+ Q + L+ DE++ Q + NQ+
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFK--CLNEKTQGETLLKLMDEMVEQSCEPNQI 723
Query: 158 SYGILINGL 166
+ IL+ L
Sbjct: 724 TMEILMERL 732
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ + +L + + ++ +N ++ + + ME G PD +T N L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ-FHDELLAQG 151
I+ + ++ ++ + G P T+ +I C ++ AL+ F D L
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK 647
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
+ N V Y ILIN K+G AL L
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 33 NDAVCLFNRL-LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
++A+ LF + L + P+ + +N ++ K ++ A+SL +M+ + + P++ T N
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
L C Q ++ +++++ +PN IT L++ L +D++ + +F
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKF 744
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 34 DAVCLFNRL-----------LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
D +C RL L+ R P+ + +N ++ + A + +M+ I
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
P++VT+N ++ C +++A + K G K N +T+ TLI C V++A+
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+++++L G + Y LI+GLC+V + A+R++
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Score = 60.1 bits (144), Expect = 9e-10, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 22 SSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
SSL ++R+ N A + + L++ + FN +L+ L + S L +M+
Sbjct: 267 SSLCKNARA--NAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK 324
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG--------YKPNTITFTTLIKGLCL 133
I PD+VTL ILIN C ++ A V K+ RG K ++I F TLI GLC
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKM--RGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 134 NDQVKRALQFHDEL-LAQGIQLNQVSYGILINGLCKVGQTRAA 175
++K A + + L + N V+Y LI+G C+ G+ A
Sbjct: 383 VGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 71/146 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + ++L+ +P + +++ L + + AI + +++ G D++ N+LI
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C + +L + K G KP++IT+ TLI + + + +++ G+
Sbjct: 555 LFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+YG +I+ C VG+ AL+L +
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFK 640
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
+R+ + P+++ N I+ + + ++A+ ME G+ ++VT LI+ C +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR---ALQFHDELLAQGIQLNQ 156
+ A K+L+ G P+ + LI GLC QV+R A++ ++L G L+
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC---QVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
++Y +LI C T +L
Sbjct: 547 LAYNMLIGLFCDKNNTEKVYEML 569
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 44 QMRHT---PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG-IMPDIVTLNILINCYCHL 99
QMR P++ + ++ A+ L M + P+ V NILIN + L
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND--QVKRALQFHDELLAQGIQLNQV 157
G A S+ ++ + +PN T+ L K CLN+ Q + L+ DE++ Q + NQ+
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFK--CLNEKTQGETLLKLMDEMVEQSCEPNQI 723
Query: 158 SYGILINGL 166
+ IL+ L
Sbjct: 724 TMEILMERL 732
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ + +L + + ++ +N ++ + + ME G PD +T N L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ-FHDELLAQG 151
I+ + ++ ++ + G P T+ +I C ++ AL+ F D L
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK 647
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
+ N V Y ILIN K+G AL L
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Query: 33 NDAVCLFNRL-LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
++A+ LF + L + P+ + +N ++ K ++ A+SL +M+ + + P++ T N
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
L C Q ++ +++++ +PN IT L++ L +D++ + +F
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKF 744
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 20 PFSS-LHSHSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM 77
PFS +HS R DA L ++ P FN ++ KT A + M
Sbjct: 374 PFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLM 433
Query: 78 EFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQV 137
E RG+ PD+ T ++I+ Y G M A +LA+ K+ K + +T+ LI+G C ++
Sbjct: 434 ESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEY 493
Query: 138 KRALQFHDELLAQGIQLNQVSYGILINGLC 167
AL+ +E+ G+Q N Y LI C
Sbjct: 494 DEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
I F+ ++ L + ++ A +L M +G P N++++ G + A VL
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
+ RG KP+ T+T +I G + A + E + +L+ V+Y LI G CK+
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIE 491
Query: 171 QTRAALRLL 179
+ AL+LL
Sbjct: 492 EYDEALKLL 500
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 34 DAVCLFNRL-----------LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
D +C RL L+ R P+ + +N ++ + A + +M+ I
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
P++VT+N ++ C +++A + K G K N +T+ TLI C V++A+
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+++++L G + Y LI+GLC+V + A+R++
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 71/146 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + ++L+ +P + +++ L + + AI + +++ G D++ N+LI
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+C + +L + K G KP++IT+ TLI + + + +++ G+
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP 614
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+YG +I+ C VG+ AL+L +
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFK 640
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 22 SSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
SSL ++R+ N A + + L++ + FN +L+ L + S L +M+
Sbjct: 267 SSLCKNARA--NTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK 324
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG--------YKPNTITFTTLIKGLCL 133
I PD+VTL ILIN C ++ A V ++ RG K ++I F TLI GLC
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 134 NDQVKRALQFHDEL-LAQGIQLNQVSYGILINGLCKVGQTRAA 175
++K A + + L + N V+Y LI+G C+ G+ A
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
+R+ + P+++ N I+ + + ++A+ ME G+ ++VT LI+ C +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR---ALQFHDELLAQGIQLNQ 156
+ A K+L+ G P+ + LI GLC QV+R A++ ++L G L+
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC---QVRRDHDAIRVVEKLKEGGFSLDL 546
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
++Y +LI C +L
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEML 569
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ + +L + + ++ +N ++ + + ME G PD +T N L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ-FHDELLAQG 151
I+ + ++ ++ + G P T+ +I C ++ AL+ F D L
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK 647
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
+ N V Y ILIN K+G AL L
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSL 674
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 74/142 (52%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF L +M P+++ +N IL + + + AI L M+ + I ++VT N +I Y
Sbjct: 352 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ A +++ ++ RG +PN IT++T+I ++ RA +L + G++++QV
Sbjct: 412 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 471
Query: 158 SYGILINGLCKVGQTRAALRLL 179
Y +I +VG A RLL
Sbjct: 472 LYQTMIVAYERVGLMGHAKRLL 493
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 44 QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS 103
+ ++TPS+ +N +L +++ K + IA L +M R + PD T + LI + G
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 104 VAFSVLAKILKRGYKPNTITFTTLI---KGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
A S L K+ + + + ++ LI + LC +A+ L GI + V+Y
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLC---DYSKAISIFSRLKRSGITPDLVAYN 264
Query: 161 ILINGLCKVGQTRAALRLLR 180
+IN K R A L++
Sbjct: 265 SMINVYGKAKLFREARLLIK 284
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 71/147 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A+ ++ Q R + ++ ++ ++ + YS AIS+ +++ GI PD+V N +
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN Y A ++ ++ + G PNT++++TL+ N + AL E+
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
L+ + I+I+ ++ + A RL
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLF 353
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 10 HRNPTFLLAMPFSS--LHSHSR-SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKH 66
H+N + PF S + S+ + S+ N A+ F ++ Q S + FN +L + +K+
Sbjct: 93 HKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKN 152
Query: 67 YSIAISLSHQM--EFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITF 124
+ L ++ + I+PD ++ ILI YC G A ++ ++ +G + TI F
Sbjct: 153 FDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAF 212
Query: 125 TTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
TT++ L +++ A +E++ +G +L+ +Y + I K R
Sbjct: 213 TTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPER 261
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 72 SLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
SL+ QM+ G++PD LN++I Y ++ A V ++ G +PN T++ L+KG+
Sbjct: 209 SLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
C +V + L F+ E+ +G+ N Y +LI L
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSL 303
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 35/182 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA +F + ++ +N ++ KT + L +M GI PD+ T NIL
Sbjct: 460 SDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL--------------------- 131
I+ G + A +++++++RG+ P+T+ FT +I G
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRM 579
Query: 132 --------------CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
C ++++A+ ++LL G++ + V Y LI+G C VG A
Sbjct: 580 KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACE 639
Query: 178 LL 179
L+
Sbjct: 640 LI 641
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R ++A + + L++ PS + F ++ K + A L M + PD+VT
Sbjct: 526 RGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT 585
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+ L++ YC +M A + K+L G KP+ + + TLI G C +++A + ++
Sbjct: 586 CSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 149 AQGIQLNQVSYGILINGL 166
+G+ N+ ++ L+ GL
Sbjct: 646 QRGMLPNESTHHALVLGL 663
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P +A+ L + R P+I ++ L+ + T A ++ ++ G++PD V
Sbjct: 357 PEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ YC+LG+ AF +LK G P+ T T LI + A + +G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
++L+ V+Y L++G K Q L+
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
+L +++ +A M RG + L++ I YC G + +L + G
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+P+ + FT I LC +K A +L GI + VS +I+G CKVG+ A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 177 RLL 179
+L+
Sbjct: 362 KLI 364
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A F LL+ + PS+ ++ + S A S+ M+ G+ D+VT N L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ Y Q++ F ++ ++ G P+ T+ LI + + + A + EL+ +G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+ +++ +I G K G + A L
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFIL 570
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 35/182 (19%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA +F + ++ +N ++ KT + L +M GI PD+ T NIL
Sbjct: 460 SDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL--------------------- 131
I+ G + A +++++++RG+ P+T+ FT +I G
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRM 579
Query: 132 --------------CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALR 177
C ++++A+ ++LL G++ + V Y LI+G C VG A
Sbjct: 580 KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACE 639
Query: 178 LL 179
L+
Sbjct: 640 LI 641
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%)
Query: 29 RSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVT 88
R ++A + + L++ PS + F ++ K + A L M + PD+VT
Sbjct: 526 RGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT 585
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+ L++ YC +M A + K+L G KP+ + + TLI G C +++A + ++
Sbjct: 586 CSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMV 645
Query: 149 AQGIQLNQVSYGILINGL 166
+G+ N+ ++ L+ GL
Sbjct: 646 QRGMLPNESTHHALVLGL 663
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P +A+ L + R P+I ++ L+ + T A ++ ++ G++PD V
Sbjct: 357 PEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ YC+LG+ AF +LK G P+ T T LI + A + +G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
++L+ V+Y L++G K Q L+
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
+L +++ +A M RG + L++ I YC G + +L + G
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+P+ + FT I LC +K A +L GI + VS +I+G CKVG+ A+
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 177 RLL 179
+L+
Sbjct: 362 KLI 364
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A F LL+ + PS+ ++ + S A S+ M+ G+ D+VT N L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ Y Q++ F ++ ++ G P+ T+ LI + + + A + EL+ +G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+ +++ +I G K G + A L
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFIL 570
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 63.9 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P+ I ++ I+ L + S A + +M +G P V +N+L+ C G+ A
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ + L +G N + FTT+I G C ND++ AL D++ + +Y L++ L
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 168 KVGQTRAALRLLR 180
K G+ A L++
Sbjct: 641 KKGRIAEATELMK 653
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
Query: 41 RLLQMRHT----PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
+LLQ+ HT P+ + + +L + +T A + + E P+ +T +++++
Sbjct: 475 KLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL 534
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
G++S A V+ +++ +G+ P + L++ LC + + A +F +E L +G +N
Sbjct: 535 RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINV 594
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
V++ +I+G C+ + AAL +L
Sbjct: 595 VNFTTVIHGFCQNDELDAALSVL 617
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 1 MSVLRYRWFHRNPTFLLAMPFSSLH-SHSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKIL 58
+ +++ R +R P FS + S+SR+ DA+ + + + P+++ N +
Sbjct: 230 LVLMKRRGIYRTPE-----AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTI 284
Query: 59 TPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYK 118
V+ A+ +M+ GI+P++VT N +I YC L ++ A +L + +G
Sbjct: 285 DVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCL 344
Query: 119 PNTITFTTLIKGLCLNDQVKRALQFHDELLAQ-GIQLNQVSYGILINGLCKVGQTRAALR 177
P+ +++ T++ LC ++ ++ + G+ +QV+Y LI+ L K AL
Sbjct: 345 PDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALW 404
Query: 178 LLR 180
L+
Sbjct: 405 FLK 407
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ R+ + P+++ +N ++ AI L M +G +PD V+ ++
Sbjct: 296 ALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMG 355
Query: 95 CYCHLGQMSVAFSVLAKILKR-GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C ++ ++ K+ K G P+ +T+ TLI L +D AL F + +G +
Sbjct: 356 YLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFR 415
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++++ Y +++ LCK G+ A L+
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLI 441
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
+R + RH P + + +L L KTK + + M+ RGI + ++ Y
Sbjct: 198 DRQWRYRHDPMV--YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRA 255
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
GQ+ A VL + + G +PN + T I +++++AL+F + + GI N V+Y
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 160 GILINGLCKVGQTRAALRLL 179
+I G C + + A+ LL
Sbjct: 316 NCMIRGYCDLHRVEEAIELL 335
Score = 53.1 bits (126), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 41/179 (22%)
Query: 42 LLQMRHT----PSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILI--- 93
LL+ H+ P + + I+ L K K L +M + G++PD VT N LI
Sbjct: 334 LLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHML 393
Query: 94 --------------------------------NCYCHLGQMSVAFSVLAKILKRGY-KPN 120
+ C G+MS A ++ ++L +G+ P+
Sbjct: 394 TKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPD 453
Query: 121 TITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+T+T ++ G C +V +A + + G + N VSY L+NG+C+ G++ A ++
Sbjct: 454 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTP-SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
++A L N +L H P ++ + ++ + A L M G P+ V+
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L+N C G+ A ++ + + PN+IT++ ++ GL ++ A E++ +G
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
V +L+ LC+ G+T A + +
Sbjct: 555 FFPGPVEINLLLQSLCRDGRTHEARKFM 582
Score = 46.6 bits (109), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P +E N +L L + A + +G ++V +I+ +C ++ A SV
Sbjct: 557 PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSV 616
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L + + T+TTL+ L ++ A + ++L +GI V+Y +I+ C+
Sbjct: 617 LDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 676
Query: 169 VGQ 171
+G+
Sbjct: 677 MGK 679
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 36/179 (20%)
Query: 38 LFNRLL-QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
LFN L ++ P I+ +N ++ L + A++L ++E +G+ PDIVT N L+
Sbjct: 166 LFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSS 225
Query: 97 CHLGQMSVAFSVLAKILKR-----------------------------------GYKPNT 121
GQ + + AK++++ G KP+
Sbjct: 226 YLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDV 285
Query: 122 ITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+F +I+G ++ A ++ E++ G + ++ ++ +L+ +CK G +A+ L +
Sbjct: 286 FSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNILINCYCHLGQMSVAFSV 108
S++ FN +L+ +K + + L +++ + I PDIV+ N LI C + A ++
Sbjct: 143 SVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVAL 202
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L +I +G KP+ +TF TL+ L Q + + +++ + + ++ +Y + GL
Sbjct: 203 LDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLAN 262
Query: 169 VGQTRAALRLL 179
+++ + L
Sbjct: 263 EAKSKELVNLF 273
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%)
Query: 71 ISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG 130
++L +++ G+ PD+ + N +I + G+M A + +I+K GY+P+ TF L+
Sbjct: 270 VNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPA 329
Query: 131 LCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+C + A++ E ++ + Q + L++ L K + A +++
Sbjct: 330 MCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVK 379
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 34 DAVCLFNRLLQMR--------H-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
D +C R+ Q R H TP+ FN + K A+ +M+ G P
Sbjct: 198 DTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRP 257
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
+++ +I CYC + + +L+++ G PN+IT+TT++ L + + AL+
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ G + + + Y LI+ L + G+ A R+ R
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 34 DAVCLFNRLLQMR--------H-TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
D +C R+ Q R H TP+ FN + K A+ +M+ G P
Sbjct: 198 DTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRP 257
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
+++ +I CYC + + +L+++ G PN+IT+TT++ L + + AL+
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ G + + + Y LI+ L + G+ A R+ R
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+ V + N++ R P ++ + +L ++ + Y A L ++ G+ PD+ T N+ I
Sbjct: 269 EVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYI 328
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
N C + A +++ + K G +PN +T+ LIK L + RA E+ G+
Sbjct: 329 NGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVN 388
Query: 154 LNQVSYGILINGLCKVGQTRAALRLLR 180
N ++ I+I+ +V + A LL
Sbjct: 389 RNSHTFDIMISAYIEVDEVVCAHGLLE 415
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%)
Query: 21 FSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
SS+ H S D + L + R +P + ++ ++ LV+ +S+ +QM+
Sbjct: 221 LSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCD 280
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
+ PD+V I++ A + ++L G P+ T+ I GLC + ++ A
Sbjct: 281 RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGA 340
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
L+ + G + N V+Y ILI L K G A L +
Sbjct: 341 LKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWK 380
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ LL + P + +N + L K A+ + M G P++VT NILI
Sbjct: 308 LFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALV 367
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G +S A ++ ++ G N+ TF +I D+V A +E + +
Sbjct: 368 KAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSS 427
Query: 158 SYGILINGLCKVGQTRAALRLL 179
+I+ LC+ G A+ LL
Sbjct: 428 RIEEVISRLCEKGLMDQAVELL 449
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 63.9 bits (154), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 63/124 (50%)
Query: 47 HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
+ P ++ FN +L+ + Y A + + G+ PD+VT N L++ Y G+ A
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+L + K KP+ +++ T+IKG C ++ A++ E+ +GI+ +Y ++G
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Query: 167 CKVG 170
+G
Sbjct: 747 TAMG 750
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 66/149 (44%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +A F L + P + +N +L K Y+ A+S+ +ME D VT N
Sbjct: 296 LLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L+ Y G A V+ + K+G PN IT+TT+I + AL+ +
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLL 179
G N +Y +++ L K ++ +++L
Sbjct: 416 GCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D + L LL +R + IL +T Y AI L +M+ G P +VT N+++
Sbjct: 199 DKIPLQEYLLDVR------AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL 252
Query: 94 NCYCHLGQ-MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ + +G+ VL ++ +G K + T +T++ ++ A +F EL + G
Sbjct: 253 DVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY 312
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ V+Y L+ K G AL +L+
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLK 340
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N ++ + A+ + +M RGI P I T N ++ Y +G + V
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQF 143
+ + K +PN +TF ++ G C + A+ F
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDF 793
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I +N +L L K+ H AI L ++ R + P+++T NILIN C ++ +
Sbjct: 152 PGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWM 210
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ K GY PN +T+TT++K ++++ LQ ++ +G + + +++ L K
Sbjct: 211 MRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIK 270
Query: 169 VGQTRAA 175
G+ A
Sbjct: 271 TGRAEEA 277
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A + R+ + P + +N +++ K + + L +M G+ PD+ + N L
Sbjct: 65 DEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Query: 93 INCYCHLGQMSVAFSVL-AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
++CY LG+ AF +L I G P T+ L+ LC + A++ L ++
Sbjct: 125 MSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR- 183
Query: 152 IQLNQVSYGILINGLCK---VGQTRAALRLLR 180
++ ++Y ILINGLCK VG +R L+
Sbjct: 184 VKPELMTYNILINGLCKSRRVGSVDWMMRELK 215
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G++PD++T N LI Y + A++V ++ + G +P+ T+ +LI G N + R
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
LQ DE+L G+ + SY L++ K+G+ A ++L
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKIL 141
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Query: 37 CLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
C+ + + I+ +N +L K + L ++E +G+ PD T I++N
Sbjct: 280 CMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
++G A LA I + G +P+ +T LI GLC V RA++ L A ++
Sbjct: 340 LNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMR----LFASMEVRDE 395
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
+Y +++ LCK G+ A +LL
Sbjct: 396 FTYTSVVHNLCKDGRLVCASKLL 418
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQ-MEFRGIMPDIVTLNI 91
N + LF+ +L +P + +N +++ K + A + H+ + G++P I T NI
Sbjct: 100 NRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNI 159
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L++ C G A L K LK KP +T+ LI GLC + +V EL G
Sbjct: 160 LLDALCKSGHTDNAIE-LFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
N V+Y ++ K + L+L
Sbjct: 219 YTPNAVTYTTMLKMYFKTKRIEKGLQLF 246
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 24 LHSHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+HS+ R+ +A+ +FN++ + P + + ++ K IA+ + +M+ G+
Sbjct: 401 IHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PD T +++INC G + A + +++ +G PN +TF +I + AL+
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVG 170
+ ++ G Q ++V+Y I++ L G
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCG 548
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++ TP+++ FN ++ K ++Y A+ L M+ G PD VT +I++
Sbjct: 486 LFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLG 545
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
H G + A V A++ ++ + P+ + L+ V +A Q++ +L G++ N
Sbjct: 546 HCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVP 605
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+ L++ +V + A LL+
Sbjct: 606 TCNSLLSTFLRVHRMSEAYNLLQ 628
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 71/143 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + +++ P+ + +N+++ + + A+++ +QM+ G PD VT LI+ +
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + +A + ++ + G P+T T++ +I L + A + E++ QG N V
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
++ I+I K AL+L R
Sbjct: 501 TFNIMIALHAKARNYETALKLYR 523
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L + K + L +M G P+ VT N LI+ Y + A +V ++
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ G +P+ +T+ TLI + A+ + + G+ + +Y ++IN L K G
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 174 AALRLL 179
AA RL
Sbjct: 482 AAHRLF 487
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 24 LHSHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+HS+ R+ N+A+ +FN++ + P + + ++ K IA+ + +M+ G+
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PD T +++INC G + A + +++ +G PN +T+ ++ + AL+
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVG 170
+ ++ G + ++V+Y I++ L G
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 73/143 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + +++ P+ + +N+++ + + + A+++ +QM+ G PD VT LI+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + +A + ++ G P+T T++ +I L + A + E++ QG N V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y I+++ K + AL+L R
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYR 528
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 71/143 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++ TP+++ +N ++ K ++Y A+ L M+ G PD VT +I++
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
H G + A +V ++ ++ + P+ + L+ V++A Q++ +L G++ N
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+ L++ +V + A LL+
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQ 633
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L + K + L +M G P+ VT N LI+ Y ++ A +V ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ G KP+ +T+ TLI + A+ + + A G+ + +Y ++IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 174 AALRLL 179
AA +L
Sbjct: 487 AAHKLF 492
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 24 LHSHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+HS+ R+ N+A+ +FN++ + P + + ++ K IA+ + +M+ G+
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PD T +++INC G + A + +++ +G PN +T+ ++ + AL+
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVG 170
+ ++ G + ++V+Y I++ L G
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 73/143 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + +++ P+ + +N+++ + + + A+++ +QM+ G PD VT LI+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + +A + ++ G P+T T++ +I L + A + E++ QG N V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y I+++ K + AL+L R
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYR 528
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 71/143 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++ TP+++ +N ++ K ++Y A+ L M+ G PD VT +I++
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
H G + A +V ++ ++ + P+ + L+ V++A Q++ +L G++ N
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+ L++ +V + A LL+
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQ 633
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L + K + L +M G P+ VT N LI+ Y ++ A +V ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ G KP+ +T+ TLI + A+ + + A G+ + +Y ++IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 174 AALRLL 179
AA +L
Sbjct: 487 AAHKLF 492
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Query: 24 LHSHSRS-LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
+HS+ R+ N+A+ +FN++ + P + + ++ K IA+ + +M+ G+
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
PD T +++INC G + A + +++ +G PN +T+ ++ + AL+
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
+ ++ G + ++V+Y I++ L G A
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 73/143 (51%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + +++ P+ + +N+++ + + + A+++ +QM+ G PD VT LI+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + +A + ++ G P+T T++ +I L + A + E++ QG N V
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+Y I+++ K + AL+L R
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYR 528
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 71/143 (49%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF ++ TP+++ +N ++ K ++Y A+ L M+ G PD VT +I++
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
H G + A +V ++ ++ + P+ + L+ V++A Q++ +L G++ N
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
+ L++ +V + A LL+
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQ 633
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ ++ L + K + L +M G P+ VT N LI+ Y ++ A +V ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ G KP+ +T+ TLI + A+ + + A G+ + +Y ++IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 174 AALRLL 179
AA +L
Sbjct: 487 AAHKLF 492
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 47 HTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAF 106
+ P I +++++ L K K A + QME +G PDI T ILI +C ++ A
Sbjct: 401 YEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKAL 460
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-IQLNQVSYGILING 165
+ A +L++G+ ++ LI G ++++ + A F E++ ++ Q +Y +LI+
Sbjct: 461 ACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDK 520
Query: 166 LCKVGQTRAALRLLR 180
L K+ ++ AL LL+
Sbjct: 521 LLKIKKSEEALDLLQ 535
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ I L + A ++ M G PD +T + L+ C ++ A VL ++
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQME 432
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+G P+ T+T LI+G C N+++ +AL +L +G ++ +LI+G
Sbjct: 433 AQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGF 485
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ N +L+ + YS A+S M+ + PD T NI+I C LGQ S A +
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 305
Query: 109 LAKILKRGY--KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+ ++ +P+ +TFT+++ + +++ + ++A+G++ N VSY L+
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 365
Query: 167 CKVGQTRAALRLL 179
G + AL +L
Sbjct: 366 AVHGMSGTALSVL 378
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Query: 24 LHSHSRSL-PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
L+S+ RS P A +F + + R P+++ +N ++ + A+ + QME GI
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 83 MPDIVTLNILINCYCHLGQMSVAF-SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
P++V++ L+ C + V +VL+ RG NT + + I ++++A+
Sbjct: 457 KPNVVSVCTLLAA-CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + + ++ + V++ ILI+G C++ + A+ L+
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLK 554
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 54/115 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I+ +N ++ A+S+ ++ GI+PD+V+ L+N Y Q A V
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
+ K KPN +T+ LI N + A++ ++ GI+ N VS L+
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 33 NDAVCLFNRLLQMRHT--PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ A+ LFN + + R P ++ F I+ ++ M G+ P+IV+ N
Sbjct: 300 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L+ Y G A SVL I + G P+ +++T L+ + Q +A + + +
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N V+Y LI+ G A+ + R
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFR 449
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ N +L+ + YS A+S M+ + PD T NI+I C LGQ S A +
Sbjct: 114 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 173
Query: 109 LAKILKRGY--KPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+ ++ +P+ +TFT+++ + +++ + ++A+G++ N VSY L+
Sbjct: 174 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 233
Query: 167 CKVGQTRAALRLL 179
G + AL +L
Sbjct: 234 AVHGMSGTALSVL 246
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 80/159 (50%), Gaps = 3/159 (1%)
Query: 24 LHSHSRSL-PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGI 82
L+S+ RS P A +F + + R P+++ +N ++ + A+ + QME GI
Sbjct: 265 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 83 MPDIVTLNILINCYCHLGQMSVAF-SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
P++V++ L+ C + V +VL+ RG NT + + I ++++A+
Sbjct: 325 KPNVVSVCTLLAA-CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 142 QFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + + ++ + V++ ILI+G C++ + A+ L+
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLK 422
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 54/115 (46%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+I+ +N ++ A+S+ ++ GI+PD+V+ L+N Y Q A V
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
+ K KPN +T+ LI N + A++ ++ GI+ N VS L+
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 33 NDAVCLFNRLLQMRHT--PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
+ A+ LFN + + R P ++ F I+ ++ M G+ P+IV+ N
Sbjct: 168 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 227
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
L+ Y G A SVL I + G P+ +++T L+ + Q +A + + +
Sbjct: 228 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ N V+Y LI+ G A+ + R
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFR 317
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 71/145 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
+ +F RL + TP+++ + ++ K S A+ +S M+ G+ ++ T +++IN
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ L + AF+V ++K G KP+ I + +I C + RA+Q E+ +
Sbjct: 528 GFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
++ +I+G K G R +L +
Sbjct: 588 TTRTFMPIIHGYAKSGDMRRSLEVF 612
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Query: 1 MSVLRYRWFHRNPTFLLAMPFSSLHSHSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKILT 59
M LR+R PT MP +H +++S ++ +F+ + + P++ FN ++
Sbjct: 580 MQKLRHR-----PTTRTFMPI--IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN 632
Query: 60 PLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKP 119
LV+ + A+ + +M G+ + T ++ Y +G AF ++ G
Sbjct: 633 GLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Query: 120 NTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ T+ L+K C + +++ AL E+ A+ I N Y ILI+G + G A L+
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI 752
Query: 180 R 180
+
Sbjct: 753 Q 753
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 65/126 (51%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
++ ++ VK K ++ A ++ M G+ PD++ N +I+ +C +G M A + ++
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
K ++P T TF +I G + ++R+L+ D + G ++ LINGL + Q
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 174 AALRLL 179
A+ +L
Sbjct: 642 KAVEIL 647
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A +F +++ P +I +N I++ + AI +M+ P T +I
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y G M + V + + G P TF LI GL Q+++A++ DE+ G+
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 154 LNQVSYGILINGLCKVGQTRAAL 176
N+ +Y ++ G VG T A
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAF 679
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A L QM+ G+ PDI T I+ G M+ A + ++ G KPN T+TTLIK
Sbjct: 748 AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 807
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
G ++AL ++E+ A GI+ ++ Y L+ L
Sbjct: 808 GWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 67/146 (45%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ + ++RH P+ F I+ K+ ++ + M G +P + T N LIN
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN 632
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
QM A +L ++ G N T+T +++G +A ++ L +G+ +
Sbjct: 633 GLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y L+ CK G+ ++AL + +
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTK 718
Score = 53.5 bits (127), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 62/138 (44%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
F RL I + +L K+ A++++ +M R I + NILI+ +
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
G + A ++ ++ K G KP+ T+T+ I + RA Q +E+ A G++ N +
Sbjct: 742 RGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKT 801
Query: 159 YGILINGLCKVGQTRAAL 176
Y LI G + AL
Sbjct: 802 YTTLIKGWARASLPEKAL 819
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 50/100 (50%)
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
G P +VT LIN Y +G++S A V + + G K N T++ +I G A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 141 LQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++++ +G++ + + Y +I+ C +G A++ ++
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVK 578
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ F ++ K + + + M+ G+ + T NI+I C C + + A ++
Sbjct: 215 PTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKAL 274
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ ++ +PN++T++ LI G C + + A+ + ++ G + + Y LI+ LCK
Sbjct: 275 IDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Query: 169 VGQTRAALRLLR 180
G AL L R
Sbjct: 335 GGDFETALILCR 346
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILINCYC 97
F L Q ++ N +L + K Y A + +M + GI PD+ T N +I C
Sbjct: 134 FRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLC 193
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN---DQVKRALQFHDELLAQGIQL 154
G S ++S++A++ ++ KP +F +I G D+V++ ++ DE G+ +
Sbjct: 194 ESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEF---GVHV 250
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+Y I+I LCK ++ A L+
Sbjct: 251 GVATYNIMIQCLCKRKKSAEAKALI 275
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 21 FSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
F H+++ + + L+ +L++ H+P + ++ IL L + S+A+ ++ +M+ R
Sbjct: 397 FKYFSKHNKT--EEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL---CLNDQV 137
GI PD++T +LI+ C L + AF ++RG P ITF + GL ++D
Sbjct: 455 GIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMA 514
Query: 138 KR 139
KR
Sbjct: 515 KR 516
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 40 NRLLQMRHT----PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
+++L+M T P+ +N K ++L ++ G PD +T ++++
Sbjct: 375 SKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKM 434
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
C G++S+A V ++ RG P+ +T T LI LC + ++ A + D + +GI
Sbjct: 435 LCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQ 494
Query: 156 QVSYGILINGLCKVGQTRAALRL 178
+++ ++ NGL G + A RL
Sbjct: 495 YITFKMIDNGLRSKGMSDMAKRL 517
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 67/137 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A+ + R P+I+ +N ++ K A + M RG+ P T N
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ + ++ K+++ G+ P+ +T+ ++K LC + ++ A+Q + E+ +GI
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 153 QLNQVSYGILINGLCKV 169
+ ++ +LI+ LC++
Sbjct: 457 DPDLLTTTMLIHLLCRL 473
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 59/132 (44%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
PS+ FN +L +++ A L +M+ + P +VT LI YC + ++ +A V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ + N + F +I GL ++ AL + V+Y L+ CK
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 169 VGQTRAALRLLR 180
G A ++L+
Sbjct: 368 AGDLPGASKILK 379
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 61/125 (48%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
FN I+ L + S A+ + + P IVT N L+ +C G + A +L ++
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
RG P T T+ K +++ + + + +L+ G ++++Y +++ LC+ G+
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 174 AALRL 178
A+++
Sbjct: 443 LAMQV 447
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 65/132 (49%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P +A+ + N ++ +PSI+ +N +++ + A+ L +QM +G PD+ T
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L++ + G++ A S+ ++ G KPN TF IK + ++ DE+ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 152 IQLNQVSYGILI 163
+ + V++ L+
Sbjct: 450 LSPDIVTWNTLL 461
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 64/128 (50%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TPS+ +N ++ ++ + + + ++ +GI PDI++ N +I YC +M A
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+ +++ G P+ IT+ T I + + A+ ++ G + NQ +Y +++G C
Sbjct: 721 IFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780
Query: 168 KVGQTRAA 175
K+ + A
Sbjct: 781 KLNRKDEA 788
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 64/134 (47%)
Query: 30 SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTL 89
SL +A +F + + + +N +L K+ A+ + ++M G P IVT
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 90 NILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA 149
N LI+ Y G + A + ++ ++G KP+ T+TTL+ G +V+ A+ +E+
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 150 QGIQLNQVSYGILI 163
G + N ++ I
Sbjct: 413 AGCKPNICTFNAFI 426
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 1 MSVLRYRWFHRNPTF-------LLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIE 53
+++ + WF + + ++A+ S L R + A +FN L + + +
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRV--SSAANMFNGLQEDGFSLDVYS 210
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ-MSVAFSVLAKI 112
+ +++ + Y A+++ +ME G P ++T N+++N + +G + S++ K+
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 113 LKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQT 172
G P+ T+ TLI + A Q +E+ A G ++V+Y L++ K +
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 173 RAALRLL 179
+ A+++L
Sbjct: 331 KEAMKVL 337
Score = 53.5 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 65/142 (45%)
Query: 39 FNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCH 98
F+ L + +P I N +++ + + + A + M+ RG P + T N L+ +
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 99 LGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
+ +L +IL +G KP+ I++ T+I C N +++ A + E+ GI + ++
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Query: 159 YGILINGLCKVGQTRAALRLLR 180
Y I A+ ++R
Sbjct: 737 YNTFIGSYAADSMFEEAIGVVR 758
Score = 53.1 bits (126), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 22 SSLHSHSRSLP-NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR 80
S ++ HSRS + + +L P II +N ++ + A + +M
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 81 GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRA 140
GI+PD++T N I Y A V+ ++K G +PN T+ +++ G C ++ A
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Query: 141 LQFHDEL 147
F ++L
Sbjct: 789 KLFVEDL 795
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKT-KHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+AV +F ++ + P++I +N IL K ++ SL +M+ GI PD T N L
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 93 INCYCHLGQM-SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
I C C G + A V ++ G+ + +T+ L+ + + K A++ +E++ G
Sbjct: 286 ITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
+ V+Y LI+ + G A+ L
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMEL 371
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 63/145 (43%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F + P+I FN + ++ + + ++ G+ PDIVT N L+
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ G S V ++ + G+ P TF TLI ++A+ + +L G+
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ +Y ++ L + G + ++L
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVL 547
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFR--GIMPDIVTLNILINCYCHLGQMSVAF 106
P++ N I+ + + K YS +ISL Q F+ I+P++V+ N +IN +C G + A
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISL-FQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEAL 236
Query: 107 SVLAKILKRG-YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILING 165
V IL + P+++T+ L KGL ++ A E+L++G + Y LI G
Sbjct: 237 EVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRG 296
Query: 166 LCKVGQTRAALRLL 179
+G A+
Sbjct: 297 YLDLGDFDKAVEFF 310
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P+ AV ++ P+I +K+ L + I + +G ++ + ++
Sbjct: 343 PDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSL 402
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ C G++ +++ L ++ K G P+ + LI+ C + ++ A + DE+ +G
Sbjct: 403 MISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEG 462
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
++N +Y +LI L + G+ +LRL
Sbjct: 463 CKMNLTTYNVLIRKLSEEGEAEESLRLF 490
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 75 HQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN 134
+M+ G+ PD+ N LI C + A + ++ G K N T+ LI+ L
Sbjct: 421 QEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEE 480
Query: 135 DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + +L+ D++L +GI+ ++ Y LI GLCK + AA+ + R
Sbjct: 481 GEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFR 526
Score = 47.0 bits (110), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ K + A L +M G ++ T N+LI G+ + +
Sbjct: 430 PDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRL 489
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ--LNQVSYGILINGL 166
K+L+RG +P+ + +LI+GLC +++ A++ + + + + +V ++N L
Sbjct: 490 FDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLN-L 548
Query: 167 CKVGQTRAALRLLR 180
C G + A +LLR
Sbjct: 549 CSNGHSGEASQLLR 562
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++ FN +++ A++L M+ GI PD++T N LI+ + H+ +L
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVS 158
+ GYKP+ +++T++I GL N Q ++A ++L G+ N +
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 63/130 (48%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
++E+N ++ K K + A+SL M+ +G PD T N L + + A +LA
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVG 170
++L G KP T+ +I + A+ ++ + G++ N+V YG LING + G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 171 QTRAALRLLR 180
A++ R
Sbjct: 635 MVEEAIQYFR 644
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 62/131 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
NDA LF+ +L+ + FN ++ H S A SL +ME +GI PD T NIL
Sbjct: 322 NDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNIL 381
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ + G + A KI K G P+T+T ++ LC V E+ I
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSI 441
Query: 153 QLNQVSYGILI 163
++++ S +++
Sbjct: 442 RIDEHSVPVIM 452
Score = 53.5 bits (127), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 60/148 (40%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L A+ LF + P +N + L A + +M G P T
Sbjct: 530 LHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYA 589
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+I Y LG +S A + + K G KPN + + +LI G + V+ A+Q+ +
Sbjct: 590 AMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Query: 151 GIQLNQVSYGILINGLCKVGQTRAALRL 178
G+Q N + LI KVG A R+
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRV 677
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILINCY 96
LF+ + ++ ++ FN +L+ V +K A+ ++ E GI PD+VT N +I
Sbjct: 144 LFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKAL 203
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
C G M S+ ++ K G++P+ I+F TL++ + + D + ++ + N
Sbjct: 204 CRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNI 263
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
SY + GL + + AL L+
Sbjct: 264 RSYNSRVRGLTRNKKFTDALNLI 286
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 64/133 (48%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
+P+I +N + L + K ++ A++L M+ GI PD+ T N LI Y +
Sbjct: 260 SPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMK 319
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
++ ++G P+T+T+ LI LC + RA++ +E + + Y ++ L
Sbjct: 320 CYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLM 379
Query: 168 KVGQTRAALRLLR 180
G+ A +L++
Sbjct: 380 GAGKIDEATQLVK 392
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 70/146 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+D + +F L + P +I FN +L + + + + M+ + + P+I + N
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ + + A +++ + G P+ T+ LI +++ ++ ++ ++E+ +G+
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 153 QLNQVSYGILINGLCKVGQTRAALRL 178
+ V+Y +LI LCK G A+ +
Sbjct: 330 TPDTVTYCMLIPLLCKKGDLDRAVEV 355
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 27 HSRSLPNDAVCLFNRLLQMRH--TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
+SRS P + + +RL+ + PS+ +N+++ L A L M RG +P
Sbjct: 137 YSRS-PVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLP 195
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D+VT LI YC + ++ VA V ++ G +PN++T + LI G V+ +
Sbjct: 196 DVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLM 255
Query: 145 DELL-----AQGIQLNQVSYGILINGLCKVG 170
EL + ++ L++ +C+ G
Sbjct: 256 KELWEYMKNETDTSMKAAAFANLVDSMCREG 286
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 53/98 (54%)
Query: 83 MPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ 142
+P + N L+N C + ++ A ++ + RG+ P+ +TFTTLI G C +++ A +
Sbjct: 159 VPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHK 218
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
DE+ GI+ N ++ +LI G K+ +L++
Sbjct: 219 VFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMK 256
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 34 DAVCLFNRLL-QMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A+ + NR++ + + P ++ +N ++ L K A+S+ Q+E + D T I+
Sbjct: 501 EALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAII 560
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C ++ +A ++ + + + +KGLC + + A F +L G
Sbjct: 561 IDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGA 620
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N V Y +I + G R A ++L
Sbjct: 621 IPNVVCYNTVIAECSRSGLKREAYQIL 647
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D F R ++ R +I +N +L + + A+ L +ME GI P +VT NILI
Sbjct: 233 DFATKFFRRMRER---DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
Y LG+ A ++ K+ G + T+T +I GL N +AL ++ G+
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVV 349
Query: 154 LNQVS 158
N V+
Sbjct: 350 PNAVT 354
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D+ T N +I YC G A+ + ++ +PN IT+ T+I G N A+
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 145 DELLAQG-IQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ G +Q N ++ ++I G + G+ AL L R
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR 513
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 43 LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQM 102
L+ + P + FN +L+ K A + +M+ +G+ PD+VT N LI+ YC ++
Sbjct: 206 LKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREI 262
Query: 103 SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
A+ ++ K+ + P+ IT+TT+I GL L Q +A + E+ G + +Y
Sbjct: 263 EKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAA 322
Query: 163 INGLC 167
I C
Sbjct: 323 IRNFC 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 52/114 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P ++ +N ++ K + A L +M PD++T +I +GQ A V
Sbjct: 244 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREV 303
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
L ++ + G P+ + I+ C+ ++ A + DE++ +G+ N +Y +
Sbjct: 304 LKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLF 357
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
FN +L L + K + A ++ H ++ + PD+ T NIL++ + + F +
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAFFEEMKG-- 239
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+G KP+ +T+ +LI C + ++++A + D++ + + ++Y +I GL +GQ
Sbjct: 240 -KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 174 AALRLLR 180
A +L+
Sbjct: 299 KAREVLK 305
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 25 HSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
H + ++P AV +FN++L+ R + + + IL + ++S A L + I
Sbjct: 336 HRKNMNIPK-AVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISL 394
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
D V N+ + LG++ A + ++ +G P+ I +TTLI G CL + A
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
E+ G + V Y +L GL G + A L+
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLK 490
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + + P ++ + T L+K K +LS +M+ + PD+ +LI+ C
Sbjct: 720 LFKDMKRREIVPDVVTY----TVLLKNKPER---NLSREMKAFDVKPDVFYYTVLIDWQC 772
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+G + A + ++++ G P+ +T LI C +K A D ++ G++ + V
Sbjct: 773 KIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVV 832
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
Y LI G C+ G A++L++
Sbjct: 833 PYTALIAGCCRNGFVLKAVKLVK 855
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A LF + + P ++ ++ +L + + +ME ++PD+V I
Sbjct: 651 PKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTI 703
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+IN YCHL + +++ + +R P+ +T+T L+K ++ +R L E+ A
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK-----NKPERNLS--REMKAFD 756
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
++ + Y +LI+ CK+G A R+
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIF 784
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND 135
QM G+ PD LI C C +G + A + ++++ G KP+ + +T LI G C N
Sbjct: 786 QMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNG 845
Query: 136 QVKRALQFHDELLAQGIQLNQVS 158
V +A++ E+L +GI+ + S
Sbjct: 846 FVLKAVKLVKEMLEKGIKPTKAS 868
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A LF + + + +N L K AI L +M +GI PD++ L
Sbjct: 378 SEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTL 437
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I C G+ S AF ++ ++ G P+ + + L GL N + A + + +G+
Sbjct: 438 IGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGV 497
Query: 153 QLNQVSYGILINGLCKVGQTRAA 175
+ V++ ++I GL G+ A
Sbjct: 498 KPTYVTHNMVIEGLIDAGELDKA 520
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L +R+ ++ P + K++ + + A + + I+PD+ T I+IN YC
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
L + A+++ + +R KP+ +T++ L+ L E+ A + + V
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVV 699
Query: 158 SYGILINGLCKVGQTRAALRLLR 180
Y I+IN C + + L +
Sbjct: 700 YYTIMINRYCHLNDLKKVYALFK 722
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF + P +I + ++ S A L +M+ G PDIV N+L
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
G AF L + RG KP +T +I+GL ++ +A F++ L + +
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRE 533
Query: 154 LNQVSYGILINGLCKVG 170
N S ++ G C G
Sbjct: 534 -NDAS---MVKGFCAAG 546
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I + K++ L A S+ ME GI PD+ + +I + + A V K
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+LK+ + N + +++++ C A E I L++V Y + + L K+G+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 172 TRAALRLLR 180
A+ L R
Sbjct: 412 VEEAIELFR 420
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEF-RGIMPDIVTLNILINCY 96
LF +++ P + N ++ V + H + A+ + HQM P+ T + LI+
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
C G+ A +L+++ +G+ PN ++ +L+ L+ ++ A++ E++ G ++
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
+SY L++ C+ G+ A RLL
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLL 417
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISL------SHQMEFRGIMPDIVTLNI 91
+ N++L +RH + +N I+ K A+++ S +E R P I T +I
Sbjct: 194 IVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECR---PTIRTYHI 250
Query: 92 LI--------NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQ- 142
L N Y + M S+ +++ G +P+ L+KG L+ V AL+
Sbjct: 251 LFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRI 310
Query: 143 FHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
FH + + N +Y LI+GLC G+T A LL
Sbjct: 311 FHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELL 347
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+ A + + + ++ P++ ++ I+ L K A +M GI PD + I+
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
IN Y G++ A ++ +++K +P++ T+T LI G +++ Q+ D++L G+
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
N V Y LI K G + + L
Sbjct: 684 SPNVVLYTALIGHFLKKGDFKFSFTLF 710
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIE-FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
N+A+ + + L M P + + + K + A +L ME G D V
Sbjct: 218 NEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTC 277
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L+ YC M++A + ++++R ++ + F TLI G + + +++ +G
Sbjct: 278 LMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKG 337
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
+Q N +Y I+I CK G ALRL
Sbjct: 338 VQSNVFTYHIMIGSYCKEGNVDYALRLF 365
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 66/147 (44%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
D L N + ++ P + + ++ L K A ++ ME G+ P + + +
Sbjct: 529 EDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSI 588
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I G++ A AK+L+ G +P+ I + +I N ++ A + +E++ +
Sbjct: 589 IGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFL 648
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ + +Y +LI+G K+G + L
Sbjct: 649 RPSSFTYTVLISGFVKMGMMEKGCQYL 675
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 70/146 (47%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +++ + TP +N ++ L + SL + ++ +PD+ T I++N
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
C AF+++ + + G +P ++++I L +V A + ++L GIQ
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 155 NQVSYGILINGLCKVGQTRAALRLLR 180
++++Y I+IN + G+ A L+
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVE 641
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P++ N I+T A + M+ GI+P++VT IL+ + G + A +
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+P+ + ++TL+KGLC + AL E+ GI N+ SY L+ LC
Sbjct: 852 FEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCY 908
Query: 169 VGQTRAALRLLR 180
T A+++++
Sbjct: 909 SRLTMEAVKVVK 920
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 55 NKILTPLVKTKH-YSIAISL------SHQMEFRG-----IMPDIVTLNILINCYCHLGQM 102
K+L L++TK SI SL S ME G I+P++ N +I YC G++
Sbjct: 751 EKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRL 810
Query: 103 SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
A++ L + K G PN +T+T L+K ++ A+ + + +QV Y L
Sbjct: 811 DEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTL 867
Query: 163 INGLCKVGQTRAALRLL 179
+ GLC + AL L+
Sbjct: 868 LKGLCDFKRPLDALALM 884
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%)
Query: 77 MEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQ 136
M+ RG+ + T NI I C + A ++L +L G KPNT+T++ LI G C D
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 137 VKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+ A + ++ +G + + Y LI LCK G AL L +
Sbjct: 308 FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCK 351
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILINCY 96
+F L + + ++ N +L + K Y A + +M + GI PD+ T N +I +
Sbjct: 138 VFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVF 197
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
C G S ++S++A++ ++G KPN+ +F +I G D+ + + +G+ +
Sbjct: 198 CESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGV 257
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
+Y I I LCK +++ A LL
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALL 280
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N+++ ++ S + S+ +ME +GI P+ + ++I+ + + V
Sbjct: 185 PDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
LA + RG T+ I+ LC + K A D +L+ G++ N V+Y LI+G C
Sbjct: 245 LAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 169 VGQTRAALRLLR 180
A +L +
Sbjct: 305 EDDFEEAKKLFK 316
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 12/164 (7%)
Query: 24 LHSHSRSL--PNDAVCLFNRLLQMRHT------PSIIEFNKILTPLVKTKHYSIAISLSH 75
LH+H L ND L L RH+ P+I N +L ++ Y + L
Sbjct: 98 LHNHILKLIREND---LEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHG 154
Query: 76 QMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG-YKPNTITFTTLIKGLCLN 134
+ GI P+I+T N++ Y + + +A + P+ TF L+KGL N
Sbjct: 155 FINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSN 214
Query: 135 DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
D +++A++ +++ +G ++ V Y L+ G K L+L
Sbjct: 215 DNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEF-----RGIMPDIVTLNILINCYCHLGQMSV 104
S + +N +L L + + A+ L ++ R + ++ T N+++N YC G+
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 105 AFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
A V ++ P+T++F L+ LC N+ + A + + E+ + ++ ++ +YG+L++
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 165 GLCKVGQ 171
K G+
Sbjct: 429 TCFKEGK 435
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
I +N +L K A L +M E GI PD+V+ NI+I+ + + A +
Sbjct: 488 ITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFN 547
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-IQLNQVSYGILINGLCKV 169
++ RG P I++TTL+K ++ Q K A + DE++ ++++ +++ +L+ G C++
Sbjct: 548 EMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRL 607
Query: 170 GQTRAALRLL 179
G A R++
Sbjct: 608 GLIEDAQRVV 617
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 80 RGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKR 139
R PD VT +++ + + G M A VLA++ + G N IT+ L+KG C Q+ R
Sbjct: 446 RNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDR 505
Query: 140 ALQFHDELLAQ-GIQLNQVSYGILINGLCKVGQTRAAL 176
A E+ GI+ + VSY I+I+G + + AL
Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGAL 543
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + + +++ V A + +M G+ + +T N+L+ YC Q+ A +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 109 LAKILK-RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
L ++ + G +P+ +++ +I G L D AL F +E+ +GI ++SY L+
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 168 KVGQTRAALRLL 179
GQ + A R+
Sbjct: 570 MSGQPKLANRVF 581
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +A LF++L + R TP+++ + +L + ++ A + + M +G+ PDIV N
Sbjct: 279 LGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHN 337
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+++ + S A + + +G PN ++T +I+ C ++ A+++ D+++
Sbjct: 338 VMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 151 GIQLNQVSYGILINGL 166
G+Q + Y LI G
Sbjct: 398 GLQPDAAVYTCLITGF 413
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 65/145 (44%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A ++N ++ P I+ N +L L++++ S AI L H M+ +G P++ + I+I
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C M A ++ G +P+ +T LI G ++ + E+ +G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
+ +Y LI + A R+
Sbjct: 436 PDGKTYNALIKLMANQKMPEHATRI 460
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 62/134 (46%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
L + + H P +N ++ + K A + ++M I P I T N+++ Y
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYF 484
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+ +V +++K+G P+ ++T LI+GL + + A ++ +E+L +G++ +
Sbjct: 485 MARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLI 544
Query: 158 SYGILINGLCKVGQ 171
Y + GQ
Sbjct: 545 DYNKFAADFHRGGQ 558
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 67/141 (47%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++AV LFN + P + +N +++ +VK + A SL +ME G DI + NI+
Sbjct: 496 SEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII 555
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+N + G A + I G KP+ +T+ TL+ + A + E+ +G
Sbjct: 556 LNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Query: 153 QLNQVSYGILINGLCKVGQTR 173
+ + ++Y +++ + V +
Sbjct: 616 EYDAITYSSILDAVGNVDHEK 636
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ LF + + +P++ + +++ L K A M G+ PD+V LN L+N
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLND-QVKRALQFHDELLAQGIQ 153
+G++ +V +++ P +++ T+IK L + V + D++ A +
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++ +Y ILI+G CK + AL LL
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLL 432
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTK-HYSIAISLSHQMEFRGIMPDIVTLNILINCY 96
+F+ + R TP+++ +N ++ L ++K H S S +M+ + P T +ILI+ Y
Sbjct: 360 VFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGY 419
Query: 97 CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
C ++ A +L ++ ++G+ P + +LI L + + A + EL ++
Sbjct: 420 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSS 479
Query: 157 VSYGILINGLCKVGQTRAALRLL 179
Y ++I K G+ A+ L
Sbjct: 480 RVYAVMIKHFGKCGKLSEAVDLF 502
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 58/123 (47%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I ++ +++ K AI L +M+ + P L+ Y +G++ A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ + G P T+T LIKGL +V A F+ ++L G+ + V L+N L K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 169 VGQ 171
VG+
Sbjct: 351 VGR 353
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A + +L+ TP ++ N ++ L K ++ +M P +V+ N +
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTV 379
Query: 93 INCY----CHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
I H+ ++S F K+ P+ T++ LI G C ++V++AL +E+
Sbjct: 380 IKALFESKAHVSEVSSWFD---KMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMD 436
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
+G +Y LIN L K + AA L +
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Score = 47.0 bits (110), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 62 VKTKHY------SIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKR 115
V KH+ S A+ L ++M+ +G PD+ N L++ G ++ A S+L K+ +
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 116 GYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
G + + + ++ G +RA++ + + GI+ + V+Y L+ G A
Sbjct: 544 GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEA 603
Query: 176 LRLLR 180
R++R
Sbjct: 604 ARMMR 608
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +A LF++L + R TP+++ + +L + ++ A + + M G+ PDIV N
Sbjct: 278 LGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 336
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+++ + S A + + +G PN ++T +I+ C ++ A+++ D+++
Sbjct: 337 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 396
Query: 151 GIQLNQVSYGILINGL 166
G+Q + Y LI G
Sbjct: 397 GLQPDAAVYTCLITGF 412
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A ++N ++ P I+ N +L L+++ S AI L H M+ +G P++ + I+I
Sbjct: 315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 374
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C M A ++ G +P+ +T LI G ++ + E+ +G
Sbjct: 375 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 434
Query: 154 LNQVSYGILI 163
+ +Y LI
Sbjct: 435 PDGKTYNALI 444
Score = 46.6 bits (109), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 62/145 (42%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ F+ ++ P + ++T K L +M+ +G PD T N LI
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ + K+++ +P+ TF ++K + + DE++ +GI
Sbjct: 446 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ SY +LI GL G++R A R L
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYL 530
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +A LF++L + R TP+++ + +L + ++ A + + M G+ PDIV N
Sbjct: 279 LGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 337
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+++ + S A + + +G PN ++T +I+ C ++ A+++ D+++
Sbjct: 338 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 151 GIQLNQVSYGILINGL 166
G+Q + Y LI G
Sbjct: 398 GLQPDAAVYTCLITGF 413
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 60/130 (46%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A ++N ++ P I+ N +L L+++ S AI L H M+ +G P++ + I+I
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+C M A ++ G +P+ +T LI G ++ + E+ +G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 154 LNQVSYGILI 163
+ +Y LI
Sbjct: 436 PDGKTYNALI 445
Score = 46.6 bits (109), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 62/145 (42%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ F+ ++ P + ++T K L +M+ +G PD T N LI
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ + K+++ +P+ TF ++K + + DE++ +GI
Sbjct: 447 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 506
Query: 155 NQVSYGILINGLCKVGQTRAALRLL 179
+ SY +LI GL G++R A R L
Sbjct: 507 DDNSYTVLIRGLISEGKSREACRYL 531
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 63/127 (49%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N +++ VK ++ A + QM DI T N++I +G+ +A +VL ++
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
K+G + + + TLI L ++ A Q D + + GI + VSY +I K G+ +
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 174 AALRLLR 180
A + L+
Sbjct: 753 EAYKYLK 759
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P I +N ++ L A+ + +++ G PD T ILI C +M A +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
++ G+ P+TI + L+ G +V A Q ++++ +G++ + +Y ILI+GL +
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 169 VGQTRAALRLL 179
G+ A L
Sbjct: 407 NGRAEAGFTLF 417
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 72/146 (49%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
DA+ +++ L H P + ++ K+ A+ + +M++ G +PD + N L+
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL 366
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ +++ A + K+++ G + + T+ LI GL N + + +L +G
Sbjct: 367 DGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++ +++ I+ LC+ G+ A++L+
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLV 452
Score = 50.1 bits (118), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 41 RLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQME-FRGIMPDIVTLNILINCYCHL 99
R++ + + P + N++L L + S + +++ + D + NI I+ +
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCW 261
Query: 100 GQMSVAFSVLAKILKRG------YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
G + A S+ ++ +R + P+ T+ +LI LCL + K AL DEL G +
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
+ +Y ILI G CK + A+R+
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRI 346
Score = 50.1 bits (118), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA+ ++ + P I +N +L +K + + A L +M G+ T NIL
Sbjct: 341 DDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNIL 400
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ G+ F++ + K+G + ITF+ + LC +++ A++ +E+ +G
Sbjct: 401 IDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGF 460
Query: 153 QLNQVSYGILINGLCKVGQ 171
++ V+ L+ G K G+
Sbjct: 461 SVDLVTISSLLIGFHKQGR 479
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P AV L+ + R ++ +N ++ + ++ I + +M RG P++ T N
Sbjct: 240 PWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNT 299
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I C G+M A+ +L ++ KRG +P++IT+ L L ++ L ++ G
Sbjct: 300 IIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSG 356
Query: 152 IQLNQVSYGILINGLCKVG 170
++ +Y +L+ + G
Sbjct: 357 VRPKMDTYVMLMRKFERWG 375
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIE-FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
+ AV LFN + + ++ +N +L L K + A +L +M +G+ PD T I
Sbjct: 163 DQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAI 222
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
L+N +C G+M A L ++ +RG+ P LI+GL ++ A + ++ G
Sbjct: 223 LVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGG 282
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRL 178
+ ++ ILI + K G+ + +
Sbjct: 283 FVPDIQTFNILIEAISKSGEVEFCIEM 309
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+ +++ + P I FN ++ + K+ I + + G+ DI T LI
Sbjct: 274 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVS 333
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
+G++ AF +L ++ G+KP + +IKG+C N A F ++ + N+
Sbjct: 334 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 393
Query: 158 SYGILINGLCKVG 170
Y +LI +C G
Sbjct: 394 VYTMLIT-MCGRG 405
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 6 YRWFHRNPTFL-LAMPFS----SLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNK---I 57
+ W NP++ +M + SL SH + ++ L QM+ I I
Sbjct: 98 FNWARSNPSYTPTSMEYEELAKSLASHKK-----YESMWKILKQMKDLSLDISGETLCFI 152
Query: 58 LTPLVKTKHYSIAISLSHQM-EFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
+ K H A+ L + + + G + N L++ C + A++++ +++++G
Sbjct: 153 IEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKG 212
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
KP+ T+ L+ G C ++K A +F DE+ +G +LI GL G +A
Sbjct: 213 LKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAK 272
Query: 177 RLL 179
++
Sbjct: 273 EMV 275
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 70/149 (46%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
PN AV L + + P I +N +L+ + + A+ + ME PD+ T N
Sbjct: 278 PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNA 337
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ Y G + A + ++ +G+ P+ +T+ +L+ ++ + + ++ G
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLLR 180
++++Y +I+ K GQ AL+L +
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYK 426
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L +A LF L P + +N +L + ++ + QM+ G D +T N
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 91 ILINCYCHLGQMSVAFSVLAKILK--RGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+I+ Y GQ+ +A L K +K G P+ IT+T LI L ++ A E+L
Sbjct: 407 TIIHMYGKQGQLDLALQ-LYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAA 175
GI+ +Y LI G K G+ A
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEA 492
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMS--VAFSVLAK 111
+N ++ ++ +S A L M RG +PD+++ N LIN G ++ +A +L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQ 171
+ G +P+ IT+ TL+ + + A++ +++ A Q + +Y +I+ + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 172 TRAALRLL 179
A RL
Sbjct: 348 AAEAERLF 355
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 1/146 (0%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
AV +F + R P + +N +++ + + A L ++E +G PD VT N L+
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLA-QGIQ 153
+ V ++ K G+ + +T+ T+I Q+ ALQ + ++ G
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
+ ++Y +LI+ L K +T A L+
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALM 461
Score = 47.0 bits (110), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 60/127 (47%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N +L + Y + + +++ G+ PD T N LI YC + + ++ ++
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
G P T+ +LI +++A Q +ELL++G++L++ Y ++ G
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 174 AALRLLR 180
A +LL+
Sbjct: 1050 KAEKLLQ 1056
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + Q + + + ++ L + +A + +M G+ PDI+T NIL++ C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 98 HLGQMSVA---------FSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
G++ A + + + +G KPN +T+TT+I G C + A ++
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
G + +Y LI + G A+ L++
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 154
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 60/122 (49%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQ 101
+ M +I+ +N +++ L A +L +ME GI PD +T N L + Y LG+
Sbjct: 282 VFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK 341
Query: 102 MSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGI 161
A V+ K+ ++G PN +++T + G N + AL+ ++ +G+ N +
Sbjct: 342 PEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMST 401
Query: 162 LI 163
L+
Sbjct: 402 LL 403
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+N IL+ K + AI L +ME G+ PDIVT N L++ Y G A +VL ++
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
G KP+T + ++L++ + +K H +L NQ+ Y + +
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR-----NQLWYDVYV 262
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+AV F + + + FN ++ K + +M+ +G+ P+ + NI+
Sbjct: 324 EEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNII 383
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ G+ AF V K++K +P+ T+T +IK C +++ A + + +G+
Sbjct: 384 LRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGV 442
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ ++ +LINGLC+ T+ A LL
Sbjct: 443 FPSMHTFSVLINGLCEERTTQKACVLL 469
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP+ N IL L++ A + +M + PD T ++I +C +M A
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADK 432
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGIL 162
V + K+G P+ TF+ LI GLC ++A +E++ GI+ + V++G L
Sbjct: 433 VWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 75/182 (41%), Gaps = 34/182 (18%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR------------ 80
++A+ FN + + P+++ FN +L+ L K+K+ A + M R
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILL 244
Query: 81 ----------------------GIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYK 118
G PDIVT +I+++ C G++ A ++ + K
Sbjct: 245 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 119 PNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRL 178
P T ++ L+ ++++ A+ E+ G++ + + LI CK + + R+
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 179 LR 180
L+
Sbjct: 365 LK 366
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 58/111 (52%)
Query: 70 AISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIK 129
A++ + M+ GI P ++ LI+ Y G++ A + ++ +G PN T+ ++I+
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 130 GLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
GLC+ + + A E+ ++G N V Y L+ L K G+ A ++++
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIK 818
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P A+ N + ++ PS++ + ++ V + A + +M +G +P++ T N
Sbjct: 705 PLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 764
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I C G+ A +L ++ RG PN + ++TL+ L ++ A + E++ +G
Sbjct: 765 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Query: 152 IQLNQVS 158
++ VS
Sbjct: 825 HYVHLVS 831
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 70/144 (48%)
Query: 35 AVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILIN 94
A+ +F ++ P++I + +L+ L K K Y A + + M GI P++ + +
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 95 CYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQL 154
+ ++ ++L ++ +G +P+ +TF +I G N A ++ + ++ ++
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEP 596
Query: 155 NQVSYGILINGLCKVGQTRAALRL 178
N+++Y +LI L + R A L
Sbjct: 597 NEITYEMLIEALANDAKPRLAYEL 620
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 71/142 (50%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
L ++A ++N ++++ P++ + + + L + +++ +L +M +GI P +VT N
Sbjct: 508 LYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFN 567
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+I+ G VA+ ++ +PN IT+ LI+ L + + + A + H + +
Sbjct: 568 AVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNE 627
Query: 151 GIQLNQVSYGILINGLCKVGQT 172
G++L+ Y ++ G T
Sbjct: 628 GLKLSSKPYDAVVKSAETYGAT 649
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+C F+++LQ P+ F+ +L+ + + ++ I+ D+ N L+
Sbjct: 421 EALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLV 480
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ YC G + A+ + + I +PN +++ T+I G N K+AL+ L + G +
Sbjct: 481 SMYCKCGNTNDAYKIFSCI----SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKE 536
Query: 154 LNQVSYGILINGLCKVG 170
N V++ L++ VG
Sbjct: 537 PNGVTFLALLSACVHVG 553
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 31 LPNDAVCLFNRLLQ---MRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIV 87
+P+ A+ FN + Q H I +N +L+ + ++ + L +ME G DI
Sbjct: 168 VPHLAMRFFNWVKQKDGFSHRVGI--YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIR 225
Query: 88 TLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDEL 147
T ILI+ Y ++ V K+ K G++ + + +I+ LC+ + AL+F+ E+
Sbjct: 226 TWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEM 285
Query: 148 LAQGIQLNQVSYGILINGLCK 168
+ +GI +Y +L++ + K
Sbjct: 286 MEKGITFGLRTYKMLLDCIAK 306
Score = 53.5 bits (127), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 3/148 (2%)
Query: 31 LPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI--AISLSHQMEFRGIMPDIVT 88
L N A+ F + M PS F ++T L + K ++ A +M G +PD
Sbjct: 728 LTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDREL 787
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
+ + C C +G A S L + K G+ P T+ ++ I+ LC +++ AL
Sbjct: 788 VQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFE 846
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ L+Q +YG +++GL + G + AL
Sbjct: 847 GERSLLDQYTYGSIVHGLLQRGDLQKAL 874
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 62/132 (46%)
Query: 40 NRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHL 99
N + ++ P + + ++ K K + +ME P +VT +I Y L
Sbjct: 878 NSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSL 937
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
G++ A++ + +RG P+ T++ I LC + + AL+ E+L +GI + +++
Sbjct: 938 GKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINF 997
Query: 160 GILINGLCKVGQ 171
+ GL + G+
Sbjct: 998 RTVFYGLNREGK 1009
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSV--AF 106
P + + +I+ L K K + +L ++M GI PD V + ++ HLGQ V A+
Sbjct: 431 PRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVA--GHLGQNRVAEAW 488
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
V + + ++G KP +++ +K LC + + ++ +++ A I + + +I+ +
Sbjct: 489 KVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSM 548
Query: 167 CKVGQ 171
K G+
Sbjct: 549 EKNGE 553
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ +F +L P+ +N +L + A ++ M I PD+ + ++
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + M A +I G++PN +T+ TLIKG + V++ ++ ++++ GI+
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Query: 154 LNQVSYGILIN--GLCK 168
NQ +++ G CK
Sbjct: 452 ANQTILTTIMDASGRCK 468
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ +F +L P+ +N +L + A ++ M I PD+ + ++
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ Y + M A +I G++PN +T+ TLIKG + V++ ++ ++++ GI+
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Query: 154 LNQVSYGILIN--GLCK 168
NQ +++ G CK
Sbjct: 459 ANQTILTTIMDASGRCK 475
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP+ +N +L L++ + I++ +M+ G D+ T NI+I+C + A +
Sbjct: 525 TPT---YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACA 581
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+++ +++ G+ P +TFT L+K L + + AL D+ + I L+ +SY ++
Sbjct: 582 LVSMMIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAF 641
Query: 168 KVG 170
+ G
Sbjct: 642 EKG 644
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 14 TFLLAMPFSSLHSHSRSLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISL 73
T+ + + FSSL + L+ +++ P I +N ++ L K + A
Sbjct: 51 TYNMMIRFSSLGRAEK--------LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA--- 99
Query: 74 SHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCL 133
R + T N LIN YC ++ ++ ++ +RG N IT+TTLI G
Sbjct: 100 ------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQ 153
Query: 134 NDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
AL E+++ G+ + +++ ++ LC + R A+ +L
Sbjct: 154 VGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++A +F LL P + +N +++ A L +M RG++PD +T N +
Sbjct: 31 DEAGNIFTNLLISGLQPDVQTYN----MMIRFSSLGRAEKLYAEMIRRGLVPDTITYNSM 86
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ C +++ A R + TF TLI G C +VK + E+ +GI
Sbjct: 87 IHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGI 137
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
N ++Y LI+G +VG AL + +
Sbjct: 138 VANVITYTTLIHGFRQVGDFNTALDIFQ 165
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP+ +N +L L++ + I++ +M+ G D+ T NI+I+C + A +
Sbjct: 553 TPT---YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACA 609
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+++ +++ G+ P +TFT L+K L + + AL D+ + I L+ +SY ++
Sbjct: 610 LVSMMIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAF 669
Query: 168 KVG 170
+ G
Sbjct: 670 EKG 672
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 59/131 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P FN ++ K + + A ++ M+ PD+VT + YC G +
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
L ++ + G PN +T+T ++ L + QV AL ++++ G + Y LI+ L K
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 169 VGQTRAALRLL 179
G+ + A +
Sbjct: 391 TGRFKDAAEIF 401
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQME-----FRGIMPDIVTLNILINCYCHLGQMSVAF 106
I N ++ LVK S+ H E F I PD T NILI+ +C + A
Sbjct: 240 IAMNSLMDALVKEN------SIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDAR 293
Query: 107 SVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
+++ + + P+ +T+T+ ++ C +R + +E+ G N V+Y I+++ L
Sbjct: 294 AMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSL 353
Query: 167 CKVGQTRAAL 176
K Q AL
Sbjct: 354 GKSKQVAEAL 363
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 68/148 (45%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+DA + + + TP ++ + + K + + +M G P++VT I+
Sbjct: 290 DDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIV 349
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
++ Q++ A V K+ + G P+ +++LI L + K A + +++ QG+
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV 409
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ + + Y +I+ + ALRLL+
Sbjct: 410 RRDVLVYNTMISAALHHSRDEMALRLLK 437
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP+ +N +L L++ + I++ +M+ G D+ T NI+I+C + A +
Sbjct: 557 TPT---YNIVLHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACA 613
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILI 163
+++ +++ G+ P +TFT L+K L + + AL D+ + I L+ +SY ++
Sbjct: 614 LVSMMIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTIL 669
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 72 SLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
SL QM GI PD+ LN L+ G+ +L+++ +G+ PN ++ +L+
Sbjct: 209 SLFRQMVDSGIEPDVFALNCLVK-----GRTINTRELLSEMKGKGFVPNGKSYNSLVNAF 263
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
L+ ++ A++ E++ G ++ +SY L++ C+ G+ A RLL
Sbjct: 264 ALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL 311
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 72 SLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
SL QM GI PD+ LN L+ G+ +L+++ +G+ PN ++ +L+
Sbjct: 234 SLFRQMVDSGIEPDVFALNCLVK-----GRTINTRELLSEMKGKGFVPNGKSYNSLVNAF 288
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
L+ ++ A++ E++ G ++ +SY L++ C+ G+ A RLL
Sbjct: 289 ALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE 337
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 35/167 (20%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + +N ++ L ++ A++L ++E +G+ PD +T NIL++ G+ +
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 109 LAKILK-------RGY----------------------------KPNTITFTTLIKGLCL 133
A++++ R Y KP+ TFT +IKG
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 134 NDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ A+ ++ E+ G + + + L+ +CK G +A L +
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCK 341
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNI 91
+A +F+ + + + + FN +L V +K + + + ++ + I PD+ + N
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
LI C G + A +++ +I +G KP+ ITF L+ + + Q ++ +
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
++ + SY + GL ++ + L
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLF 270
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 86 IVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHD 145
+ NIL+ +C +M A S+ K+ R + P+ T L+ G V F+
Sbjct: 176 VDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYH 234
Query: 146 ELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
E++ +G + N V+YGI I+G CK ALRL
Sbjct: 235 EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFE 269
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 1/148 (0%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
+A +F +L R P + N +L + + H+M RG P+ VT I
Sbjct: 193 KEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIR 251
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ +C A + + + + TTLI G + +A Q DE+ +G+
Sbjct: 252 IDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGL 311
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
+ +Y L++ L K G A+++++
Sbjct: 312 TPDCGAYNALMSSLMKCGDVSGAIKVMK 339
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 45 MRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSV 104
+R TP + + + K+ + A S+ M+ + + PD V + LI+ H +
Sbjct: 640 IRGTPEV--YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDE 697
Query: 105 AFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
AF +L +G + TI++++L+ C K+AL+ ++++ + ++ + LI
Sbjct: 698 AFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALIT 757
Query: 165 GLCKVGQTRAALRLL 179
LC+ Q A+ L
Sbjct: 758 ALCEGNQLPKAMEYL 772
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Query: 54 FNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKIL 113
+ +++ K+ + HQM G+ ++ T LI+ GQ++ AF +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 114 KRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG--IQLNQVSYGILINGLCKVGQ 171
+ KP+ + F LI + V RA E+ A+ I + +S G L+ C GQ
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 172 TRAA 175
A
Sbjct: 625 VERA 628
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 23 SLHSHSRSLPNDAVC-LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRG 81
+++S S+S D C ++ + + TP + F+ ++ K A + + +G
Sbjct: 650 AVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQG 709
Query: 82 IMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRAL 141
I ++ + L+ C+ A + KI +P T LI LC +Q+ +A+
Sbjct: 710 IRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAM 769
Query: 142 QFHDELLAQGIQLNQVSYGILI 163
++ DE+ G++ N ++Y +L+
Sbjct: 770 EYLDEIKTLGLKPNTITYSMLM 791
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 6/156 (3%)
Query: 28 SRSLPNDAVCLFNRLLQMRHTPSIIE---FNKILTPLVKTKHYSIAISLSHQMEFRGIMP 84
++ LP A ++ M T S+++ + I+ L K+ A L QM+ R + P
Sbjct: 290 NKGLPYKAFEIYE---SMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRP 346
Query: 85 DIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFH 144
+ L++ G++ + V ++ G++P+ F +LI ++ AL+
Sbjct: 347 SFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLW 406
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
DE+ G + N Y ++I K G+ A+ + +
Sbjct: 407 DEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P D+ +F ++ + P+ + +L L K A+ L M +G +P++V
Sbjct: 115 PEDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
++ +C ++ A + K+ G PN ++ L++GL + + A+ F E+L G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 152 IQLNQVSYGILINGLCKVG---QTRAALRLL 179
N ++ L++ LC+V Q ++A+ L
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTL 262
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 55/122 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF + P ++ + ++ K A + +M+ GI P+ + +L+
Sbjct: 149 EAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLV 208
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + A + +++L+ G+ PN TF L+ LC V++A D L +G
Sbjct: 209 QGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Query: 154 LN 155
+N
Sbjct: 269 VN 270
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
P D+ +F ++ + P+ + +L L K A+ L M +G +P++V
Sbjct: 115 PEDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
++ +C ++ A + K+ G PN ++ L++GL + + A+ F E+L G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 152 IQLNQVSYGILINGLCKVG---QTRAALRLL 179
N ++ L++ LC+V Q ++A+ L
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTL 262
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 55/122 (45%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A+ LF + P ++ + ++ K A + +M+ GI P+ + +L+
Sbjct: 149 EAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLV 208
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
+ + A + +++L+ G+ PN TF L+ LC V++A D L +G
Sbjct: 209 QGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Query: 154 LN 155
+N
Sbjct: 269 VN 270
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 73/148 (49%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N A LF+ +++ ++ ++ I+ KT+ S A+ L +M+ RG P+I N L
Sbjct: 405 NKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSL 464
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
I+ + + A + ++ + P+ +++T++I + +++R ++ + E
Sbjct: 465 IDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRG 524
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLLR 180
++++ GI++ K + +RLL+
Sbjct: 525 KIDRAMAGIMVGVFSKTSRIDELMRLLQ 552
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+ +N ++ L+K + + +M RG+ P+ T+N + +C G + A +
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+ G+ P +++ LI LC N+ V++A + +G L ++ L N LC
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 170 GQTRAALRLL 179
G+ A L+
Sbjct: 476 GKPDMARELV 485
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+++ +N ++ PL K + A + +M +G+ P I T + + L F +
Sbjct: 371 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRI---LRTGEEVFEL 427
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
LAK+ K G +P T+ LI+ LC L DE+ + + + SY ++I+GL
Sbjct: 428 LAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 487
Query: 169 VGQTRAA 175
G+ A
Sbjct: 488 NGKIEEA 494
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 57 ILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRG 116
+++ K + + +A+ + M +G+ P++V N LIN G++ + F V + + G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 117 YKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI-QLNQVSYGILINGLCKVGQTRAA 175
+KP+ T+ L+ L ++ + LQ D + ++ + LN+ Y + K+G A
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 176 LRLL 179
++LL
Sbjct: 410 VKLL 413
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
D++ L++ + + P I +N ++ L + + A+ L ++ G+ PD VT N +I
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
C G++ VA +VLA ++ P TF ++ + ++ L+ ++ +
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLG 427
Query: 154 LNQVSYGILINGLCKVGQTRAALRL 178
+ ++ +++ L K Q AL++
Sbjct: 428 PTEETFLLILGKLFKGKQPENALKI 452
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNI 91
DA+ LF L + + F+ +L +VK A + + + + I LN+
Sbjct: 98 EDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL 157
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL--- 148
L+ C + + +A V ++ +G P+ ++ L+KG CL +++ A +
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 149 -AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G + V Y IL++ LC G+ A+ +L
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFR-GIMPDIVTLNI 91
DA+ LF L + + F+ +L +VK A + + + + I LN+
Sbjct: 98 EDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL 157
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL--- 148
L+ C + + +A V ++ +G P+ ++ L+KG CL +++ A +
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 149 -AQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G + V Y IL++ LC G+ A+ +L
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
>AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11286756-11288513 REVERSE
LENGTH=551
Length = 551
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
+F + ++R +PS +N +L LVK + +A+ L M GI+ D +T +++ C
Sbjct: 175 VFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMVRNGIVSDELTWDLIAQILC 234
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G+ F K+++ G + I +T L++ N + E+ + ++L+
Sbjct: 235 EQGRSKSVF----KLMETGVESCKI-YTNLVECYSRNGEFDAVFSLIHEMDDKKLELSFC 289
Query: 158 SYGILINGLCKVG 170
SYG +++ C++G
Sbjct: 290 SYGCVLDDACRLG 302
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 39 FNRLLQMRH---TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINC 95
N +L+MR P+ + +N +L+ L +T+ + + QM+ G PD + ++
Sbjct: 270 LNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRV 329
Query: 96 YCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN 155
G+ ++ ++++RG++P + LI LC ++V ALQ +++ +
Sbjct: 330 LYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGY 389
Query: 156 QVSYGILINGLCKVG 170
Y +LI LCK G
Sbjct: 390 GQVYDLLIPKLCKGG 404
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 48 TPSIIEFNKILTPLVK-------TKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
TP + FN +LT L + + A+++ +M I P ++ NIL++C
Sbjct: 240 TPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTR 299
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ + +L ++ + G P+T ++ +++ L L + + Q DE++ +G + + Y
Sbjct: 300 RVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYY 359
Query: 161 ILINGLCKVGQTRAALRLL 179
LI LC V + AL+L
Sbjct: 360 DLIGVLCGVERVNFALQLF 378
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 75 HQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLN 134
QM+ G P+I + L+N Y G A ++ ++ G PN + TTL+K
Sbjct: 261 QQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKG 320
Query: 135 DQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAA 175
R+ + EL + G N++ Y +L++GL K G+ A
Sbjct: 321 GLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEA 361
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 50.4 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 62/129 (48%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF+ +L+ P F I++ + A+ +M G PD VT+ +I+ Y
Sbjct: 197 LFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYG 256
Query: 98 HLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQV 157
G + +A S+ + ++ + +TF+TLI+ ++ L ++E+ A G++ N V
Sbjct: 257 RAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLV 316
Query: 158 SYGILINGL 166
Y LI+ +
Sbjct: 317 IYNRLIDSM 325
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 32 PNDAVCLFNRLLQ-MRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLN 90
P A + N LL+ M+ + +I +N + K+K + L +M RGI PD T
Sbjct: 155 PETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFT 214
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQ 150
+I+C G A K+ G +P+ +T +I V AL +D +
Sbjct: 215 TIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTE 274
Query: 151 GIQLNQVSYGILI 163
+++ V++ LI
Sbjct: 275 KWRIDAVTFSTLI 287
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 11 RNPTFLLAMPFSSLHSHSR-SLPNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSI 69
+ TFL + + S+ R S+ + A+ +F + ++ +++ FN +L + + +
Sbjct: 100 KTETFLSTL----IRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFER 155
Query: 70 AISLSHQM--EFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTL 127
L + + I PD ++ +LI YC G+ A ++ + +G + I FTT+
Sbjct: 156 VPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTI 215
Query: 128 IKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTR 173
+ L N V A E++ +G L+ Y + + K R
Sbjct: 216 LGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPER 261
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 68/147 (46%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
++++ + R+L P++ ++K+++ L+K + S A+ + +M RG++P +
Sbjct: 342 DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSF 401
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGI 152
+ C G A + K K G + + + L+K L + L DE+ G
Sbjct: 402 LKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGY 461
Query: 153 QLNQVSYGILINGLCKVGQTRAALRLL 179
+ Y +++GLC +G A+ ++
Sbjct: 462 PSDVEVYEYIVDGLCIIGHLENAVLVM 488
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 54/108 (50%)
Query: 72 SLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGL 131
S+ H M+ +G++ D VT LI+ G + A + ++ G +P +++T +K L
Sbjct: 143 SVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKML 202
Query: 132 CLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+ +V+ A + + E+L + N +Y +L+ L G+ AL +
Sbjct: 203 FADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIF 250
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 33 NDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNIL 92
N + ++ LL TPS++ +N ++ V ++ AI+L +M + PD +T N L
Sbjct: 172 NGLLARYDILLLDHGTPSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTL 231
Query: 93 INCYCHLGQMSVAFSVLAKILKRGYK-------PNTITFTTLIKGLC-LNDQVKRALQFH 144
I+ G + A + ++ + P+ +T+TTL+KG D + F
Sbjct: 232 IHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQEIFL 291
Query: 145 DELLAQGIQLNQVSYGILINGLCKVGQTRAAL 176
+ L + + +++ ++ +++ + K G T AL
Sbjct: 292 EMKLCENVFIDRTAFTAVVDAMLKCGSTSGAL 323
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+A + ++ + P ++ + ++ L K A+ L M PD+ N +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG-- 151
+ C ++ A V +I ++G PN +T+ +L+K LC + ++ + +E+ +G
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 152 IQLNQVSYGILI 163
N V++ L+
Sbjct: 385 CSPNDVTFSYLL 396
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIM---PDIVT 88
P A+ L +++ H P + + + A L M +G P T
Sbjct: 284 PKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKT 343
Query: 89 LNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELL 148
++I + F ++ +++ G P+ T+ +I+G+C+ ++V A +F DE+
Sbjct: 344 FALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 149 AQGIQLNQVSYGILINGLCKVGQTRAALRL 178
+G + V+Y + LC+ +T AL+L
Sbjct: 404 NKGYPPDIVTYNCFLRVLCENRKTDEALKL 433
Score = 47.0 bits (110), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 43 LQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQM 102
++++ P I FN +L L K +L +M R + PD T N+L +C +
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDP 284
Query: 103 SVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLN---QVSY 159
A +L ++++ G+KP T+ I C V A D ++ +G ++ ++
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 160 GILINGLCKVGQTRAALRLL 179
++I L K + L+
Sbjct: 345 ALMIVALAKNDKAEECFELI 364
Score = 46.6 bits (109), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 53/116 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P+ F ++ L K L +M G +PD+ T +I C ++ A+
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILIN 164
L ++ +GY P+ +T+ ++ LC N + AL+ + ++ + +Y +LI+
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 59/115 (51%)
Query: 51 IIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLA 110
+I +N +L ++ A+ L + M+ G+ P+++T N++I GQ+ A +
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 111 KILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILING 165
++ G PN I++TT++ G+ N + A+ F ++ G++ N S + ++
Sbjct: 501 QMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 51/108 (47%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I +N +L K Y A + + G+ P ++T N+L+N Y GQ + +L +
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
Query: 112 ILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
+ KP++IT++T+I KRA +H ++ G + SY
Sbjct: 616 MAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 47.0 bits (110), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 38 LFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYC 97
LF + PS +N ++ + I +L +ME G+ P++ + LI+ Y
Sbjct: 401 LFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYG 460
Query: 98 HLGQMS-VAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQ 156
+MS +A ++ K G KP++ ++T LI ++ ++A +E+ +GI+ +
Sbjct: 461 RTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSV 520
Query: 157 VSYGILINGLCKVGQT 172
+Y +++ + G T
Sbjct: 521 ETYTSVLDAFRRSGDT 536
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 52 IEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAK 111
I ++ I+T + Y+ AI +M G+MPD VT + +++ Y G++ S+ +
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 112 ILKRGYKPNTITFTTLIKGLCLN---DQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ G+KP+ I F+ L K D ++ LQ E+ + ++ N V Y L+ + +
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQ---EMKSMDVKPNVVVYNTLLEAMGR 338
Query: 169 VGQTRAALRLL 179
G+ A L
Sbjct: 339 AGKPGLARSLF 349
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 64/146 (43%)
Query: 34 DAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILI 93
+ + L+ R + P I F+ + + Y + +M+ + P++V N L+
Sbjct: 274 EVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLL 333
Query: 94 NCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQ 153
G+ +A S+ ++L+ G PN T T L+K + ALQ +E+ A+
Sbjct: 334 EAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWP 393
Query: 154 LNQVSYGILINGLCKVGQTRAALRLL 179
++ + Y L+N +G A RL
Sbjct: 394 MDFILYNTLLNMCADIGLEEEAERLF 419
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 49 PSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSV 108
P + N I+ ++ S + + G+ PDI T NILI + G SV
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 109 LAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCK 168
+ + KR + T+T+ +I+ ++++ ++ QG++ N ++Y L+N K
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 169 VG 170
G
Sbjct: 404 AG 405
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAIS-LSHQMEFRGIMPDIVTLN 90
P+ A LF +L P+I + +++ K++ A S L + PD+ T
Sbjct: 160 PDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFT 219
Query: 91 ILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKG 130
+LI+C C LG+ + S++ ++ G +T+T+ T+I G
Sbjct: 220 VLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDG 259
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 65/130 (50%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
+I+ F ++ VK + + ME +M D+ + +LI+ + G++ A ++
Sbjct: 245 NIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLV 304
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
+ + + + + ++ G V++ ++ + E+ ++G+ N+ +Y +L+NGLCK
Sbjct: 305 LMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKA 364
Query: 170 GQTRAALRLL 179
G+ A+ L
Sbjct: 365 GKVCEAMSFL 374
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 53/103 (51%)
Query: 78 EFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQV 137
+F D+ + NIL+ Y GQ S+ + +++K +P+ ITF +L+ G + V
Sbjct: 555 QFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 138 KRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLLR 180
++ L + ++ G+ N Y +++ L + G+ + A + ++
Sbjct: 615 RQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQ 657
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
++IE+N ++ +K A L M G+ PD T N L+ L
Sbjct: 504 TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYL 563
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKV 169
K+ + GY + I + +I Q+ A + + E++ I+ + V YG+LIN
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 170 GQTRAAL 176
G + A+
Sbjct: 624 GNVQQAM 630
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 32 PNDAVCLFNRLLQMRHTPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNI 91
++A+ +F R+L P + +L+ + + ++ RG+ + N
Sbjct: 231 ASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNA 290
Query: 92 LINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQG 151
+I+ Y G ++ A V + +R N +T+TT+I GL + AL + ++ G
Sbjct: 291 VIDMYAKSGNITKALDVFECVNER----NVVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Query: 152 IQLNQVSYGILINGLCKVGQTRAALRLL 179
++ N V++ +++ VG RL
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLF 374
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 42 LLQMRHTPSIIEFNKILTPLVKT-KHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLG 100
L + P+ FN ++ L T + A+SL +M+F G+ PD T N + L
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 101 QMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYG 160
++ V SV + + K G + + +LI QV A + DE+ + + VS+
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI----TERDTVSWN 202
Query: 161 ILINGLCKVGQTRAALRLLR 180
+I+G + G + A+ L R
Sbjct: 203 SMISGYSEAGYAKDAMDLFR 222
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 69 IAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVLAKILKRGYKPNTITFTTLI 128
+A S+ ME G P+I+ N LI Y + +M A + ++ G +P+ ++ ++I
Sbjct: 332 LAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMI 391
Query: 129 KGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLCKVGQTRAALRLL 179
+G D + A ++ EL G + N + LIN K G A++ +
Sbjct: 392 EGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTI 442
Score = 47.0 bits (110), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 55/117 (47%)
Query: 50 SIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFSVL 109
S+ +N +L K K S+ +M+ PD T NI+IN Y G + VL
Sbjct: 767 SLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVL 826
Query: 110 AKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGL 166
++ + G P+ ++ TLIK + V+ A+ E+ + I ++V+Y L+ L
Sbjct: 827 KELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%)
Query: 48 TPSIIEFNKILTPLVKTKHYSIAISLSHQMEFRGIMPDIVTLNILINCYCHLGQMSVAFS 107
TP ++ + +++ L K + I L + M +G P++ T N+ I + + A
Sbjct: 209 TPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDAND 268
Query: 108 VLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSYGILINGLC 167
+L + K +P++IT+ +IKG L A + + + +G + N Y +I+ LC
Sbjct: 269 LLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLC 328
Query: 168 KVG 170
K G
Sbjct: 329 KAG 331
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 100 GQMSVAFSVLAKILKRGYKPNTITFTTLIKGLCLNDQVKRALQFHDELLAQGIQLNQVSY 159
G SVA ++ ++ GY P+T T L+ LC D++ A++ +E+ A G + SY
Sbjct: 151 GSQSVA-DIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESY 209
Query: 160 GILINGLCKVGQTRAALRLLR 180
G +IN LC +T +++++
Sbjct: 210 GAVINSLCLARKTTDVVKIVK 230