Miyakogusa Predicted Gene
- Lj0g3v0079559.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0079559.1 Non Chatacterized Hit- tr|K4CEY8|K4CEY8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,23.82,5e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat; no
des,CUFF.4091.1
(710 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 404 e-113
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 226 5e-59
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 3e-57
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 1e-55
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 2e-54
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 2e-54
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 3e-54
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 5e-53
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 6e-52
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 2e-51
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 2e-51
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 4e-51
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 199 7e-51
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 8e-51
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 1e-50
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 5e-50
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 195 8e-50
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 2e-49
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 2e-49
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 3e-49
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 4e-49
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 2e-48
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 7e-48
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 9e-48
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 9e-48
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 2e-47
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 6e-47
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 7e-46
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 1e-45
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 2e-45
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 5e-45
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 5e-44
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 175 1e-43
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 4e-43
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 172 5e-43
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 9e-43
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 1e-41
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 1e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 1e-40
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 1e-40
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 1e-40
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 1e-40
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 3e-40
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 164 3e-40
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 4e-40
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 1e-39
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 2e-39
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 2e-39
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 4e-39
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 7e-39
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 7e-39
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 7e-39
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 1e-38
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 158 1e-38
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 3e-38
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 3e-38
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 4e-38
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 3e-37
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 7e-37
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 5e-35
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 2e-34
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 143 4e-34
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 143 4e-34
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 5e-34
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 5e-34
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 5e-34
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 8e-34
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 1e-33
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 138 2e-32
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 5e-32
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 134 2e-31
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 3e-31
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 134 3e-31
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 9e-30
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 127 2e-29
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 6e-29
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 6e-29
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 6e-29
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 123 5e-28
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 1e-27
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-27
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 5e-27
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 8e-27
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 119 1e-26
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 1e-26
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-26
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 2e-26
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 4e-26
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 115 8e-26
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-25
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 114 3e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 5e-25
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 8e-25
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 5e-24
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 8e-24
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 109 8e-24
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 108 1e-23
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 4e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 98 2e-20
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 8e-20
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 95 2e-19
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 94 3e-19
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 94 4e-19
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 93 5e-19
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 8e-19
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 90 5e-18
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 89 8e-18
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 89 9e-18
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 89 2e-17
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 88 2e-17
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 87 6e-17
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 85 2e-16
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 80 7e-15
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-14
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 76 9e-14
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 76 1e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 75 1e-13
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 75 2e-13
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 74 3e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 73 6e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 72 1e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 71 3e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 70 6e-12
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 69 8e-12
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 69 1e-11
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 69 1e-11
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 69 1e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 67 4e-11
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 8e-11
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 66 8e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 65 1e-10
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 65 1e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 65 1e-10
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 65 2e-10
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 65 2e-10
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 64 5e-10
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 9e-10
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 61 3e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 61 4e-09
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 59 1e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 59 1e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 59 1e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 3e-08
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 57 4e-08
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 57 6e-08
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 57 6e-08
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-08
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-07
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 54 4e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 54 4e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 53 7e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G14350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 49 9e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/643 (38%), Positives = 363/643 (56%), Gaps = 45/643 (6%)
Query: 80 YKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL---RGMAVEPNVVSFNTVIDG 136
+K L E + + S + +++++ +Y R +D+A+ I+ + P V+S+N V+D
Sbjct: 120 FKSLQETYDLCYSTS-SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDA 178
Query: 137 -LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
+ +KR I AE + +EM ++P+ TYN LI N+ + A+ L+D+M+ +
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV-ALTLFDKMETKGCL 237
Query: 196 VPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
TY +LI C +D +K+ M G EP+L++YN +I+ C R+++ +
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
M RG + D V NTLI +CK G +A M AEM+ G+ P+ TY+ LI +C
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
++ A + +M GL P E Y LV + G ++A+ + EM GF
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF------ 411
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
SPS+VTYNALI G+C+ G++E+A+ +L M E LSPD VSY+ V+SGFC+ ++ +A
Sbjct: 412 --SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGL----------------------SDEVNYNSVI 472
+ EM E G I+ D +SSL++G DE Y ++I
Sbjct: 470 LRVKREMVEKG-IKP-DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 473 NAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCT 532
NAYC EG++ KAL LH+EM G L V Y +L +G +K++RTR AK LL++FY+
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE--E 585
Query: 533 SLPT-FTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNF 591
S+P+ TY TLIENCSN EFKSVV L KGF M+G+ EA V ++L N+KPDG YN
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 592 LIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSC 651
+I HCR ++ KAY +Y EMV GF H +V+AL+KAL G+ NE+ VI +VLRSC
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSC 705
Query: 652 NINGFELHKALSETGVIVREDKVKDVLLNVLAEIAMDGLLLNG 694
++ E K L E I + DV+L+VLAE+A DG L NG
Sbjct: 706 ELSEAEQAKVLVE---INHREGNMDVVLDVLAEMAKDGFLPNG 745
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 270/523 (51%), Gaps = 92/523 (17%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTV 133
D A + +M G LP+V TYN L+ YC+ +++D+ +LR MA+ EPN++S+N V
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I+GLC + R+KE +L EMN +G + D VTYNTLI K N +A+ ++ +M +
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH-QALVMHAEMLRHG 340
Query: 194 IPVPWTTYTSLIHLLC-------------------------TYN-----------VDKAY 217
+ TYTSLIH +C TY +++AY
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFF 277
+V EM +GF PS+VTYN LI+ +C +++DA+ + M ++GL+PD V +T+++ F
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 278 CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
C+ ++++A ++ EMVE+GI P+ TYS LI C QRR EA DL+ EML GL P E
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT----------------------- 374
+ Y L+ AYC+ G+ KA L +EM+ KG LPD VT
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 375 ----EFSPSLVTYN---------------ALIYGNCLLGRVEEALGILRGMAEMSLSPDD 415
E PS VTY+ +LI G C+ G + EA + M + PD
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640
Query: 416 VSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE--VN-YNSVI 472
+YNI+I G C+ G++ KA+ L EM ++G + + +L+K L E VN NSVI
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL--LHTVTVIALVKALHKEGKVNELNSVI 698
Query: 473 -----NAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGF 510
+ +E E +K L+ + E + + VL M DGF
Sbjct: 699 VHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/563 (28%), Positives = 264/563 (46%), Gaps = 59/563 (10%)
Query: 85 EMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKR 141
+M N G ++ TY++L++ +CR ++ A+ +L M EP++V+ N++++G C
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
RI +A L+ +M G PDS T+NTLI + ++ N A+AL D+M + TY
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH-NRASEAVALVDRMVVKGCQPDLVTY 224
Query: 202 TSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
+++ LC ++D A + +M EP +V YN +I A C V DA+ +F M +
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
+G+ P+ V N+LI C YG A + ++M+ER I PN T+S LID + +L E
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A L+ EM+ + P + Y +L+ +C+ +A H+ + MI K P+ +
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN--------V 396
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
VTYN LI G C RV+E + + R M++ L + V+Y +I GF + E A + +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 441 MDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRAS 500
M G + D+ +S L+ GL C G+V AL++ + ++
Sbjct: 457 MVSDGVLP--DIMTYSILLDGL-------------CNNGKVETALVVFEYLQRSKMEPDI 501
Query: 501 VLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP-------TFTYDTLIENCSNNEFKS 553
Y ++ +G K + +DL SL TY T++
Sbjct: 502 YTYNIMIEGMCKAGKVEDG--------WDLFCSLSLKGVKPNVVTYTTMMS--------- 544
Query: 554 VVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMV 613
GF +GLK EA ++ + + PD YN LI H R + + + EM
Sbjct: 545 ------GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Query: 614 HYGFASHMFSVLALIKALFHVGR 636
F S + L+ + H GR
Sbjct: 599 SCRFVGDA-STIGLVTNMLHDGR 620
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 227/460 (49%), Gaps = 30/460 (6%)
Query: 50 VSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
+++M + G +P +L LL C + +A ++ +MV G+ P T+N L+H R
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 108 DKRVDEAMGILRGMAV---EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
R EA+ ++ M V +P++V++ V++GLC + I A LL++M + P V
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEM 223
YNT+I A+ N V A+ L+ +M + I TY SLI LC Y A ++ ++M
Sbjct: 259 YNTIIDALCNYKN-VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 224 IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGEL 283
I P++VT++ LI A+ ++ +A ++ M R + PD ++LI FC + L
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNL 343
++A M M+ + PN TY+ LI C +R+ E +LFREM GL Y L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 344 VGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGIL 403
+ + E A + +M+ G LPD ++TY+ L+ G C G+VE AL +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPD--------IMTYSILLDGLCNNGKVETALVVF 489
Query: 404 RGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS 463
+ + PD +YNI+I G CK G++ ++L + ++GV V
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL----SLKGVKPNV--------- 536
Query: 464 DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLY 503
V Y ++++ +C +G +A L EM+ G L S Y
Sbjct: 537 --VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 220/479 (45%), Gaps = 60/479 (12%)
Query: 14 RNSGMTRGFTAAAAAGSLESEPKKVTSGGLLK----------TTTTVSEMNRKGLDPAR- 62
R S ++ A L EP VT LL + V +M G P
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 63 --ESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG 120
+LIH L ++ A ++ MV G P + TY ++++ C+ +D A+ +L+
Sbjct: 188 TFNTLIHGLFRHNRASE-AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 121 M---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK--- 174
M +EP VV +NT+ID LC + + +A L EM++KG+ P+ VTYN+LI +
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 175 ----------------NTNLV---------------IRAIALYDQMKQQRIPVPWTTYTS 203
N N+V + A LYD+M ++ I TY+S
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 204 LIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG 262
LI+ C ++ +D+A +F MI+ P++VTYN LI +C RV + M +FR M RG
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 263 LTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
L + V TLI F + E + A + +MV G+LP+ TYS L+D LC ++ A
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 323 DLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVT 382
+F + + P Y Y ++ C G+ + L + KG P++VT
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV--------KPNVVT 538
Query: 383 YNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
Y ++ G C G EEA + R M E PD +YN +I + G+ + EL+ EM
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 237/541 (43%), Gaps = 54/541 (9%)
Query: 108 DKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
D ++D+A+ + M P++V F+ ++ + + L ++M + G++ + T
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEM 223
Y+ LI + + L + L MK P T SL++ C N + A + +M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEP-DIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 224 IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGEL 283
+ G++P T+N LIH +R +A+ + M +G PD V ++ CK G++
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNL 343
+ A + +M + I P Y+ +ID LC + +++A +LF EM G+ P Y +L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 344 VGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGIL 403
+ C G +S A L +MI + + +P++VT++ALI G++ EA +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIER--------KINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 404 RGMAEMSLSPDDVSYNIVISGFC---KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMK 460
M + S+ PD +Y+ +I+GFC +L E FELM+ D
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------------------ 391
Query: 461 GLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAK 520
+ V YN++I +C V + + L EM G + +V Y L GF + A+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 521 ESLLRMFYDLCTSLP-TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQ 579
+M D LP TY L++ NN K E A V+ LQ
Sbjct: 452 IVFKQMVSD--GVLPDIMTYSILLDGLCNNG----------------KVETALVVFEYLQ 493
Query: 580 WN-YKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHN 638
+ +PD YN +I C+ V+ ++++ + G ++ + ++ G
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 639 E 639
E
Sbjct: 554 E 554
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 171/331 (51%), Gaps = 9/331 (2%)
Query: 51 SEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
+EM+ KG+ P SLI LC +D A ++LS+M+ P+V T++ L+ A+ +
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSD-ASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 108 DKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
+ ++ EA + M +++P++ +++++I+G C R+ EA+ + + M SK P+ VT
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEM 223
YNTLI K V + L+ +M Q+ + TYT+LIH D A VF +M
Sbjct: 399 YNTLIKGFCK-AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 224 IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGEL 283
++ G P ++TY+ L+ C +V+ A+ +F + + PD N +I CK G++
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNL 343
E +++ + +G+ PN TY+ ++ C + EA LFREM G P Y L
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 344 VGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
+ A+ G+ + + L EM F+ D T
Sbjct: 578 IRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 189/444 (42%), Gaps = 39/444 (8%)
Query: 205 IHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLT 264
I+ L +D A +F +M+ S PS+V +++L+ A ++ + + M + G++
Sbjct: 54 INRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 113
Query: 265 PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
+ + LI FC+ +L A + A+M++ G P+ T + L++ C R+S+A L
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
+M+ G P + + L+ S+A L D M+ KG PD LVTY
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD--------LVTYG 225
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA 444
++ G C G ++ AL +L+ M + + P V YN +I C + A L EMD
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 445 GGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYI 504
GIR + V YNS+I C G S A L +M V +
Sbjct: 286 -GIR--------------PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 505 MLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMR 564
L D F K+ + A++ YD +I+ + + + L GF M
Sbjct: 331 ALIDAFVKEGKLVEAEK----------------LYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 565 GLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSV 624
+EA + ++ + P+ YN LI C+ + VD+ ++ EM G + +
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 625 LALIKALFHVGRHNEVRRVIQNVL 648
LI F + + V + ++
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMV 458
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 148/293 (50%), Gaps = 12/293 (4%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDP---ARESLIHLLCC-DQLQNDNAYKVLSEMVNSGFLP 93
V G L++ EM ++ +DP SLI+ C D+L D A + M++ P
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL--DEAKHMFELMISKDCFP 394
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELL 150
+V TYN L+ +C+ KRVDE M + R M+ + N V++ T+I G R A+ +
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT 210
++M S G+ PD +TY+ L+ + N V A+ +++ +++ ++ TY +I +C
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGK-VETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 211 Y-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
V+ + +F + G +P++VTY ++ +C + ++A +FR M + G PD+
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
NTLI + G+ + E+ EM + +A T L+ + RL ++F
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKSF 625
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 158/413 (38%), Gaps = 86/413 (20%)
Query: 282 ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYF 341
+L+ A + +MV+ P+ +SKL+ + + L +M G+S Y Y
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 342 NLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALG 401
L+ +C + S A + +M+ G+ PD +VT N+L+ G C R+ +A+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPD--------IVTLNSLLNGFCHGNRISDAVS 172
Query: 402 ILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG 461
++ M EM PD ++N +I G + +A L+ M ++KG
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM----------------VVKG 216
Query: 462 LS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAK 520
D V Y V+N C G++ AL L +ME G + V+
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ-GKIEPGVV------------------ 257
Query: 521 ESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQW 580
Y+T+I+ N +K+V N+A ++ +
Sbjct: 258 -----------------IYNTIIDALCN--YKNV-------------NDALNLFTEMDNK 285
Query: 581 NYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEV 640
+P+ YN LI C A + +M+ ++ + ALI A G+ E
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 641 RRVIQNVLR----------SCNINGFELHKALSETGVIVREDKVKDVLLNVLA 683
++ +++ S INGF +H L E + KD NV+
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 269/556 (48%), Gaps = 45/556 (8%)
Query: 85 EMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKR 141
+M N G + TY++L++ +CR ++ A+ +L M EPN+V+ +++++G C +
Sbjct: 106 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
RI EA L+ +M G P++VT+NTLI + + N A+AL D+M + TY
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTY 224
Query: 202 TSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
+++ LC + D A+ + +M EP ++ YN +I C + DA+ +F+ M
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
+G+ P+ V ++LI+ C YG A + ++M+ER I P+ T+S LID + +L E
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A L+ EM+ + P Y +L+ +C+ +A + + M+ K PD +
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD--------V 396
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
VTYN LI G C RVEE + + R M++ L + V+YNI+I G + G+ A E+ E
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 441 MDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRAS 500
M G V ++M YN++++ C G++ KA+++ + ++
Sbjct: 457 MVSDG--------VPPNIM-------TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 501 VLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKG 560
Y ++ +G K G E +F +L SL D + N + G
Sbjct: 502 YTYNIMIEGMCKA----GKVEDGWDLFCNL--SLKGVKPDVVAYN----------TMISG 545
Query: 561 FGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASH 620
F +G K EA ++ + + P+ YN LI R + + + + EM GFA
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Query: 621 MFSVLALIKALFHVGR 636
S + L+ + H GR
Sbjct: 606 A-STIGLVTNMLHDGR 620
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 235/486 (48%), Gaps = 57/486 (11%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNV 127
C + Q A VL +M+ G+ P++ T + LL+ YC KR+ EA+ ++ M V +PN
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK--NTNLVIRAIAL 185
V+FNT+I GL + EA L+ M +KG PD VTY ++ + K +T+L A L
Sbjct: 187 VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL---AFNL 243
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
++M+Q ++ Y ++I LC Y ++D A +F EM G P++VTY+ LI C
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
R DA + M +R + PD + LI F K G+L +A ++ EMV+R I P+ T
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
YS LI+ C RL EA +F M+ P Y L+ +C + + EM
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 365 HKGFLPDFVT---------------------------EFSPSLVTYNALIYGNCLLGRVE 397
+G + + VT P+++TYN L+ G C G++E
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
+A+ + + + P +YNI+I G CK G++ ++L + ++GV
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL----SLKGVK------ 533
Query: 458 LMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTR 517
D V YN++I+ +C +G +A L EM+ G+L S Y L +AR R
Sbjct: 534 -----PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI-----RARLR 583
Query: 518 -GAKES 522
G +E+
Sbjct: 584 DGDREA 589
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/499 (29%), Positives = 235/499 (47%), Gaps = 42/499 (8%)
Query: 14 RNSGMTRGFTAAAAAGSLESEPKKVTSGGLL----------KTTTTVSEMNRKGLDPAR- 62
R S + L EP VT LL + V +M G P
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 63 --ESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG 120
+LIH L + A ++ MV G P + TY V+++ C+ D A +L
Sbjct: 188 TFNTLIHGLFLHN-KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 121 M---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTN 177
M +EP V+ +NT+IDGLC + + +A L +EM +KG+ P+ VTY++LI+ + N
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYG 305
Query: 178 LVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYN 236
A L M +++I T+++LI + +A K++ EM+ +PS+VTY+
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER 296
LI+ +C DR+ +A +F M + PD V NTLI FCKY +E+ E+ EM +R
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 297 GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
G++ N TY+ LI L A ++F+EM+ G+ P Y L+ C G+ KA
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 357 FHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
+ + + ++ P++ TYN +I G C G+VE+ + ++ + PD V
Sbjct: 486 MVVFEYLQR--------SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYC 476
+YN +ISGFC+ G +A L EM E G L + YN++I A
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDG---------------TLPNSGCYNTLIRARL 582
Query: 477 AEGEVSKALILHDEMEHHG 495
+G+ + L EM G
Sbjct: 583 RDGDREASAELIKEMRSCG 601
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 167/330 (50%), Gaps = 9/330 (2%)
Query: 52 EMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRD 108
EM KG+ P SLI LC +D A ++LS+M+ P V T++ L+ A+ ++
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSD-ASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 109 KRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTY 165
++ EA + M +++P++V+++++I+G C R+ EA+++ + M SK PD VTY
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 166 NTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMI 224
NTLI K V + ++ +M Q+ + TY LI L + D A ++F EM+
Sbjct: 400 NTLIKGFCKYKR-VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 225 ASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
+ G P+++TYN L+ C +++ AM +F + + P N +I CK G++E
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
+++ + +G+ P+ Y+ +I C + EA LF+EM G P Y L+
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 345 GAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
A G+ + L EM GF D T
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 187/441 (42%), Gaps = 39/441 (8%)
Query: 208 LCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
L +D A +F EM+ S PS++ +++L+ A ++ + + M + G+ +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
+ LI FC+ +L A + +M++ G PN T S L++ C +R+SEA L +
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
M G P + L+ L + S+A L D M+ KG PD LVTY ++
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD--------LVTYGVVV 228
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
G C G + A +L M + L P + YN +I G CK + A L EM E GI
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGI 287
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
R + V Y+S+I+ C G S A L +M + L
Sbjct: 288 R--------------PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 508 DGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLK 567
D F K+ + A++ YD +++ + + L GF M
Sbjct: 334 DAFVKEGKLVEAEK----------------LYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 568 NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLAL 627
+EA + ++ + PD YN LI C+ + V++ ++ EM G + + L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 628 IKALFHVGRHNEVRRVIQNVL 648
I+ LF G + + + + ++
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMV 458
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 153/293 (52%), Gaps = 12/293 (4%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDPA---RESLIHLLCC-DQLQNDNAYKVLSEMVNSGFLP 93
V G L++ EM ++ +DP+ SLI+ C D+L D A ++ MV+ P
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL--DEAKQMFEFMVSKHCFP 394
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELL 150
V TYN L+ +C+ KRV+E M + R M+ + N V++N +I GL A+E+
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT 210
+EM S G+ P+ +TYNTL+ + KN L +A+ +++ +++ ++ TY +I +C
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 211 Y-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
V+ + +F + G +P +V YN +I +C + ++A +F+ M + G P++
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
NTLI + G+ E + E+ EM G +A T L+ + RL ++F
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 243/510 (47%), Gaps = 34/510 (6%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNV 127
C + Q A VL +M+ G+ P + T + LL+ YC KR+ EA+ ++ M V +PN
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V+FNT+I GL + EA L+ M ++G PD TY T++ + K ++ + A++L
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL-ALSLLK 244
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M++ +I YT++I LC Y NV+ A +FTEM G P++VTYN LI C
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
R DA + M +R + P+ V + LI F K G+L +A ++ EM++R I P+ TYS
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
LI+ C RL EA +F M+ P Y L+ +C + L EM +
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
G + + VTYN LI G G + A I + M + PD ++Y+I++ G C
Sbjct: 425 GLVGN--------TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 427 KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL--SDEVNYNSVINAYCAEGEVSKA 484
K G+L KA L VF L K D YN +I C G+V
Sbjct: 477 KYGKLEKA-----------------LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 485 LILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE 544
L + G ++Y + GF +K A ++L R + T + TY+TLI
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA-DALFREMKEDGTLPNSGTYNTLIR 578
Query: 545 -NCSNNEFKSVVELAKGFGMRGLKNEAASV 573
+ + + EL K G +A+++
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTI 608
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 263/553 (47%), Gaps = 63/553 (11%)
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
+YN+L++ +CR ++ A+ +L M EP++V+ +++++G C +RI EA L+ +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-N 212
P++VT+NTLI + + N A+AL D+M + TY ++++ LC +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLH-NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+D A + +M E +V Y +I A C V DA+ +F M ++G+ P+ V N+
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
LI C YG A + ++M+ER I PN T+S LID + +L EA L+ EM+
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
+ P + Y +L+ +C+ +A H+ + MI K P+ +VTYN LI G C
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN--------VVTYNTLIKGFCK 407
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
RVEE + + R M++ L + V+YN +I G + G+ A ++ +M G D+
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG--VPPDI 465
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
+S L+ GL C G++ KAL++ + ++ Y ++ +G K
Sbjct: 466 ITYSILLDGL-------------CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 513 KARTRGAKESLLRMFYDLCTSLP-------TFTYDTLIENCSNNEFKSVVELAKGFGMRG 565
+ +DL SL Y T+I GF +G
Sbjct: 513 AGKVEDG--------WDLFCSLSLKGVKPNVIIYTTMIS---------------GFCRKG 549
Query: 566 LKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYN--MYMEMVHYGFASHMFS 623
LK EA ++ + + P+ YN LI R R+ DKA + + EM GF S
Sbjct: 550 LKEEADALFREMKEDGTLPNSGTYNTLI--RARLRDGDKAASAELIKEMRSCGFVGDA-S 606
Query: 624 VLALIKALFHVGR 636
++++ + H GR
Sbjct: 607 TISMVINMLHDGR 619
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 140/586 (23%), Positives = 247/586 (42%), Gaps = 88/586 (15%)
Query: 62 RESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---L 118
RE L + D L+ D+A + EMV S LPS+ +N LL A + + D + + +
Sbjct: 48 REKLSRNVLLD-LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM 106
Query: 119 RGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL 178
+ + + ++ S+N +I+ C + ++ A +L +M G PD VT ++L+
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR- 165
Query: 179 VIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNEL 238
+ A+AL DQM ++P+ VT+N L
Sbjct: 166 ISEAVALVDQM----------------------------------FVMEYQPNTVTFNTL 191
Query: 239 IHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
IH ++ +A+ + M RG PD T++ CK G+++ A + +M + I
Sbjct: 192 IHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 299 LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
+ Y+ +ID LC + +++A +LF EM G+ P Y +L+ C G +S A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
L +MI + + +P++VT++ALI G++ EA + M + S+ PD +Y
Sbjct: 312 LLSDMIER--------KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 419 NIVISGFC---KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAY 475
+ +I+GFC +L E FELM+ D + V YN++I +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKD------------------CFPNVVTYNTLIKGF 405
Query: 476 CAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP 535
C V + + L EM G + +V Y L G + A++ +M D +P
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD---GVP 462
Query: 536 --TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLI 593
TY L++ G G +A V + + +PD YN +I
Sbjct: 463 PDIITYSILLD---------------GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 594 VEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNE 639
C+ V+ ++++ + G ++ +I G E
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 189/443 (42%), Gaps = 39/443 (8%)
Query: 206 HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
++L +D A +F EM+ S PS+V +N+L+ A ++ + + M + ++
Sbjct: 54 NVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY 113
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
D N LI FC+ +L A + +M++ G P+ T S L++ C +R+SEA L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 326 REMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNA 385
+M P + L+ L + S+A L D M+ +G PD L TY
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD--------LFTYGT 225
Query: 386 LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
++ G C G ++ AL +L+ M + + D V Y +I C + A L EMD
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK- 284
Query: 446 GIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIM 505
GIR + V YNS+I C G S A L +M V +
Sbjct: 285 GIR--------------PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 506 LFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRG 565
L D F K+ + A++ YD +I+ + + + L GF M
Sbjct: 331 LIDAFVKEGKLVEAEK----------------LYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 566 LKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVL 625
+EA + ++ + P+ YN LI C+ + V++ ++ EM G + +
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 626 ALIKALFHVGRHNEVRRVIQNVL 648
LI+ LF G + +++ + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMV 457
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 148/283 (52%), Gaps = 11/283 (3%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDP---ARESLIHLLCC-DQLQNDNAYKVLSEMVNSGFLP 93
V G L++ EM ++ +DP SLI+ C D+L D A + M++ P
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL--DEAKHMFELMISKDCFP 393
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELL 150
+V TYN L+ +C+ KRV+E M + R M+ + N V++NT+I GL A+++
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT 210
++M S G+ PD +TY+ L+ + K L +A+ +++ +++ ++ TY +I +C
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLE-KALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 211 Y-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
V+ + +F + G +P+++ Y +I +C + ++A +FR M + G P++
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
NTLI + G+ + E+ EM G + +A T S +I+ L
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 158/412 (38%), Gaps = 84/412 (20%)
Query: 282 ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYF 341
+L+ A ++ EMV+ LP+ ++KL+ + + L M +S Y+Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 342 NLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALG 401
L+ +C + A + +M+ G+ PD +VT ++L+ G C R+ EA+
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPD--------IVTLSSLLNGYCHGKRISEAVA 171
Query: 402 ILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG 461
++ M M P+ V++N +I G + +A L+ M RG +F+
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA----RGCQPDLFT----- 222
Query: 462 LSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKE 521
Y +V+N C G++ AL L +ME G + A V+
Sbjct: 223 ------YGTVVNGLCKRGDIDLALSLLKKMEK-GKIEADVV------------------- 256
Query: 522 SLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWN 581
Y T+I+ N +K+V N+A ++ +
Sbjct: 257 ----------------IYTTIIDALCN--YKNV-------------NDALNLFTEMDNKG 285
Query: 582 YKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVR 641
+P+ YN LI C A + +M+ ++ + ALI A G+ E
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 642 RVIQNVLR----------SCNINGFELHKALSETGVIVREDKVKDVLLNVLA 683
++ +++ S INGF +H L E + KD NV+
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 173/612 (28%), Positives = 279/612 (45%), Gaps = 80/612 (13%)
Query: 61 ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVD------EA 114
+R +L+HL + D A + EMV S PS+ ++ LL A + K+ D E
Sbjct: 37 SRNALLHL------KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEK 90
Query: 115 MGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK 174
M IL V N+ ++N +I+ LC + ++ A +L +M G P VT N+L+
Sbjct: 91 MEIL---GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC- 146
Query: 175 NTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLV 233
+ N + A+AL DQM + T+T+L+H L +N +A + M+ G +P LV
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 234 TYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM 293
TY +I+ C R A+ + M + D VI +T+I CKY ++ A + EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 294 VERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEF 353
+GI P+ TYS LI CLC R S+A L +ML ++P + +L+ A+ G+
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 354 SKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP 413
+A L DEMI + P++VTYN+LI G C+ R++EA I M P
Sbjct: 327 IEAEKLFDEMIQR--------SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 414 DDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG------------ 461
D V+YN +I+GFCK ++ EL +M G + + +++L+ G
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG--NTVTYTTLIHGFFQASDCDNAQM 436
Query: 462 -----LSDEVN-----YNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
+SD V+ YN++++ C G++ KA+++ + ++ Y ++ +G
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 512 KKARTRGAKESLLRMFYDLCTSLP-------TFTYDTLIENCSNNEFKSVVELAKGFGMR 564
K + +DL SL Y+T+I GF +
Sbjct: 497 KAGKVEDG--------WDLFCSLSLKGVKPDVIAYNTMIS---------------GFCKK 533
Query: 565 GLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSV 624
GLK EA ++ + + PD YN LI H R + + + EM FA S
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA-ST 592
Query: 625 LALIKALFHVGR 636
L+ + H GR
Sbjct: 593 YGLVTDMLHDGR 604
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 184/446 (41%), Gaps = 43/446 (9%)
Query: 203 SLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG 262
+L+HL +D+A +F EM+ S PS+V +++L+ A + + M G
Sbjct: 40 ALLHL----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95
Query: 263 LTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
++ + N +I C+ +L A + +M++ G P+ T + L++ C R+SEA
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 323 DLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVT 382
L +M+ G P + LV + S+A L + M+ KG PD LVT
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD--------LVT 207
Query: 383 YNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
Y A+I G C G + AL +L M + + D V Y+ VI CK + A L EMD
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 443 EAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVL 502
G IR D Y+S+I+ C G S A L +M V
Sbjct: 268 NKG-IR--------------PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 503 YIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFG 562
+ L D F K+ + A++ +D +I+ + + L GF
Sbjct: 313 FNSLIDAFAKEGKLIEAEK----------------LFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 563 MRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMF 622
M +EA + ++ + PD YN LI C+ + V ++ +M G +
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 623 SVLALIKALFHVGRHNEVRRVIQNVL 648
+ LI F + + V + ++
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMV 442
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 136/307 (44%), Gaps = 35/307 (11%)
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
PS+V ++ L+ + + + + M + +S + +YNI+I+ C+ +L A +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
+ +M + G + V NS++N +C +S+A+ L D+M G
Sbjct: 123 LGKMMKLGYGPSI---------------VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 498 RASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVEL 557
+V + L G + + A + RM C TY +I
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP-DLVTYGAVIN------------- 213
Query: 558 AKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGF 617
G RG + A ++LN + + + D +Y+ +I C+ R+VD A N++ EM + G
Sbjct: 214 --GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 618 ASHMFSVLALIKALFHVGRHNEVRRVIQNVL-RSCNINGF---ELHKALSETGVIVREDK 673
+F+ +LI L + GR ++ R++ ++L R N N L A ++ G ++ +K
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 674 VKDVLLN 680
+ D ++
Sbjct: 332 LFDEMIQ 338
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 227/453 (50%), Gaps = 33/453 (7%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVID 135
A+ + +++ G+ P +N LL+ C + RV EA+ ++ M +P +++ NT+++
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
GLC ++ +A L+ M G P+ VTY ++ M K+ + A+ L +M+++ I
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL-AMELLRKMEERNIK 260
Query: 196 VPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
+ Y+ +I LC ++D A+ +F EM GF+ ++TYN LI +C R D +
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
R M R ++P+ V + LI F K G+L +A ++ EM++RGI PN TY+ LID C
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
+ RL EA + M+ G P + L+ YC L EM +G + +
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN--- 437
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
VTYN L+ G C G++E A + + M + PD VSY I++ G C GEL KA
Sbjct: 438 -----TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 435 FELMVEMDEAG-----GI-----------RGVDLA--VFSSL-MKGLS-DEVNYNSVINA 474
E+ +++++ GI VD A +F SL +KG+ D YN +I+
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Query: 475 YCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
C + +SKA IL +M G + Y +L
Sbjct: 553 LCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/570 (26%), Positives = 262/570 (45%), Gaps = 54/570 (9%)
Query: 74 LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSF 130
++ D+A + +M+ S LP+V +N L A + K+ + + + + M + ++ +
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
+ +I+ C R++ A + ++ G PD+V +NTL+ + V A+ L D+M
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR-VSEALELVDRMV 185
Query: 191 QQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
+ T +L++ LC V A + M+ +GF+P+ VTY +++ C +
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
AM + R M +R + DAV + +I CK G L+ AF + EM +G + TY+ LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
C R + L R+M+ +SP + L+ ++ G+ +A L EM+ +G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI- 364
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+P+ +TYN+LI G C R+EEA+ ++ M PD +++NI+I+G+CK
Sbjct: 365 -------APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 430 ELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHD 489
+ EL EM +RGV +++ V YN+++ +C G++ A L
Sbjct: 418 RIDDGLELFREM----SLRGV-----------IANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 490 EMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS---LPTFTYDTLIEN- 545
EM V Y +L DG G E L +F + S L Y +I
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDN----GELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 546 CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKA 605
C+ ++ +L ++G+ K D YN +I E CR+ ++ KA
Sbjct: 519 CNASKVDDAWDLFCSLPLKGV----------------KLDARAYNIMISELCRKDSLSKA 562
Query: 606 YNMYMEMVHYGFASHMFSVLALIKALFHVG 635
++ +M G A + LI+A H+G
Sbjct: 563 DILFRKMTEEGHAPDELTYNILIRA--HLG 590
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 201/427 (47%), Gaps = 58/427 (13%)
Query: 34 EPKKVTSGGLLKT------TTTVSEMNRK------GLDPARESLIHLLCCDQLQNDNAYK 81
+P +VT G +L T E+ RK LD + S+I C DNA+
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLC 138
+ +EM GF + TYN L+ +C R D+ +LR M + PNVV+F+ +ID
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW 198
+ +++EA++LL+EM +G+AP+++TYN+LI K L
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL-------------------- 384
Query: 199 TTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
++A ++ MI+ G +P ++T+N LI+ YC +R+ D + +FR M
Sbjct: 385 ---------------EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRL 318
RG+ + V NTL+ FC+ G+LE A ++ EMV R + P+ +Y L+D LC L
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 319 SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSP 378
+A ++F ++ + Y ++ C + A+ L + KG D
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD------- 542
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
YN +I C + +A + R M E +PD+++YNI+I + A EL+
Sbjct: 543 -ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 439 VEMDEAG 445
EM +G
Sbjct: 602 EEMKSSG 608
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 208/447 (46%), Gaps = 27/447 (6%)
Query: 52 EMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRV 111
EM K +L++ LC + +D A ++ MV +GF P+ TY +L+ C+ +
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSD-AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 112 DEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTL 168
AM +LR M ++ + V ++ +IDGLC + A L EM KG D +TYNTL
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 169 ITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGF 228
I A L D +K++ P T + + + +A ++ EM+ G
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 229 EPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFE 288
P+ +TYN LI +C +R+++A+ + M +G PD + N LI +CK ++ E
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 289 MRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYC 348
+ EM RG++ N TY+ L+ C +L A LF+EM+ + P +Y L+ C
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 349 LVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAE 408
GE KA + + I K ++ + Y +I+G C +V++A + +
Sbjct: 485 DNGELEKALEIFGK-IEK-------SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 409 MSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNY 468
+ D +YNI+IS C+ L KA L +M E G DE+ Y
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA---------------PDELTY 581
Query: 469 NSVINAYCAEGEVSKALILHDEMEHHG 495
N +I A+ + + + A L +EM+ G
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSG 608
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 192/435 (44%), Gaps = 39/435 (8%)
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
D A +F +MI S P+++ +N L A + + + + + M +G+ + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
I FC+ +L AF ++++ G P+ ++ L++ LC + R+SEA +L M+ G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
P LV CL G+ S A L D M+ G F P+ VTY ++ C
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG--------FQPNEVTYGPVLNVMCKS 241
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA 453
G+ A+ +LR M E ++ D V Y+I+I G CK G L AF L EM+ I+G
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME----IKGFK-- 295
Query: 454 VFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
+D + YN++I +C G L +M V + +L D F K+
Sbjct: 296 ---------ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 514 ARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASV 573
+ R A + LL+ + T TY++LI+ GF EA +
Sbjct: 347 GKLREA-DQLLKEMMQRGIAPNTITYNSLID---------------GFCKENRLEEAIQM 390
Query: 574 LNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFH 633
++ ++ PD +N LI +C+ +D ++ EM G ++ + L++
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 634 VGRHNEVRRVIQNVL 648
G+ +++ Q ++
Sbjct: 451 SGKLEVAKKLFQEMV 465
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 144/282 (51%), Gaps = 9/282 (3%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPS 94
V G L + + EM ++G+ P SLI C + + + A +++ M++ G P
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN-RLEEAIQMVDLMISKGCDPD 402
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQ 151
+ T+N+L++ YC+ R+D+ + + R M+ V N V++NT++ G C +++ A++L Q
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY 211
EM S+ + PD V+Y L+ + N L +A+ ++ ++++ ++ + Y +IH +C
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELE-KALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 212 N-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVIC 270
+ VD A+ +F + G + YN +I C +D + A +FR M + G PD +
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
N LI + A E+ EM G + T +I+ L
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 127/333 (38%), Gaps = 74/333 (22%)
Query: 317 RLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEF 376
+ +A DLFR+M+ P + L A ++ L +M KG
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI-------- 119
Query: 377 SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
+ S+ T + +I C ++ A + + ++ PD V +N +++G C + +A E
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGS 496
L+ M E G + + N+++N C G+VS A++L D M
Sbjct: 180 LVDRMVEMGHKPTL---------------ITLNTLVNGLCLNGKVSDAVVLIDRMVET-- 222
Query: 497 LRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVE 556
GF T G +++ C + + +E
Sbjct: 223 ------------GFQPNEVTYGPVLNVM---------------------CKSGQTALAME 249
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
L + R N K D Y+ +I C+ ++D A+N++ EM G
Sbjct: 250 LLRKMEER----------------NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 617 FASHMFSVLALIKALFHVGRHNEVRRVIQNVLR 649
F + + + LI + GR ++ ++++++++
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 168/614 (27%), Positives = 272/614 (44%), Gaps = 87/614 (14%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRD-KRVDEAMGILRG---MAVEPNVVSFNTVI 134
A +V +M+N G + SV + NV L +D + A+ + R + V NV S+N VI
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVI 253
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+C RIKEA LL M KG PD ++Y+T++ + L + L + MK++ +
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL-DKVWKLIEVMKRKGL 312
Query: 195 PVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
Y S+I LLC + +A + F+EMI G P V Y LI +C R ++ A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
F M R +TPD + +I+ FC+ G++ +A ++ EM +G+ P++ T+++LI+ C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
+ +AF + M+ G SP Y L+ C G+ A L EM G
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG------ 486
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
P++ TYN+++ G C G +EEA+ ++ L+ D V+Y ++ +CK GE+ K
Sbjct: 487 --LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE-VNYNSVINAYCAEGEVSKALILHDEME 492
A E++ EM L KGL V +N ++N +C G
Sbjct: 545 AQEILKEM----------------LGKGLQPTIVTFNVLMNGFCLHG------------- 575
Query: 493 HHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEF 551
ML DG E LL + T+++L++ C N
Sbjct: 576 ------------MLEDG-----------EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 552 KSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYME 611
K+ + K RG+ PDG Y L+ HC+ RN+ +A+ ++ E
Sbjct: 613 KAATAIYKDMCSRGV----------------GPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 612 MVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFELHKALSETGVIVRE 671
M GF+ + + LIK + E R V + R E+ S+T +
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY---K 713
Query: 672 DKVKDVLLNVLAEI 685
K D +++ + EI
Sbjct: 714 GKRPDTIVDPIDEI 727
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 145/495 (29%), Positives = 229/495 (46%), Gaps = 65/495 (13%)
Query: 72 DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVV 128
D + A V E G +VA+YN+++H C+ R+ EA +L M ++ P+V+
Sbjct: 223 DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 129 SFNTVIDGLC--------------AKR---------------------RIKEAEELLQEM 153
S++TV++G C KR ++ EAEE EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIA-LYDQMKQQRIPVPWTTYTSLIHLLCTY- 211
+G+ PD+V Y TLI K + IRA + + +M + I TYT++I C
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGD--IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++ +A K+F EM G EP VT+ ELI+ YC ++DA + M G +P+ V
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
TLI CK G+L+ A E+ EM + G+ PN TY+ +++ LC + EA L E
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
GL+ Y L+ AYC GE KA + EM+ KG P++VT+N L+ G C
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG--------LQPTIVTFNVLMNGFC 572
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
L G +E+ +L M ++P+ ++N ++ +C L A + +M RGV
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS----RGVG 628
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
D Y +++ +C + +A L EM+ G + Y +L GF
Sbjct: 629 -----------PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 512 KKARTRGAKESLLRM 526
K+ + A+E +M
Sbjct: 678 KRKKFLEAREVFDQM 692
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 197/414 (47%), Gaps = 21/414 (5%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARE---SLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSV 95
G L K + M RKGL P S+I LLC C + + A+ SEM+ G LP
Sbjct: 295 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF---SEMIRQGILPDT 351
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
Y L+ +C+ + A M + P+V+++ +I G C + EA +L E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY- 211
M KGL PDSVT+ LI K ++ A +++ M Q TYT+LI LC
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMK-DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++D A ++ EM G +P++ TYN +++ C +++A+ + GL D V
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
TL+ +CK GE++KA E+ EM+ +G+ P T++ L++ C L + L ML
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
G++P + +LV YC+ A + +M +G PD TY L+ G+C
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG--------KTYENLVKGHC 642
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
++EA + + M S +Y+++I GF K + +A E+ +M G
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 146/329 (44%), Gaps = 40/329 (12%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATY 98
G +++ EM KGL+P + L+ C +A++V + M+ +G P+V TY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 99 NVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
L+ C++ +D A +L M ++PN+ ++N++++GLC I+EA +L+ E +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 156 KGLAPDSVTYNTLITAMSKNT------------------------NLVIRAIALYDQMKQ 191
GL D+VTY TL+ A K+ N+++ L+ ++
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 192 QRIPVPW----------TTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIH 240
+ W TT+ SL+ C N + A ++ +M + G P TY L+
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
+C +++A +F+ M +G + + LI F K + +A E+ +M G+
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREML 329
+ + + D +R D E++
Sbjct: 700 DKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 168/614 (27%), Positives = 272/614 (44%), Gaps = 87/614 (14%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRD-KRVDEAMGILRG---MAVEPNVVSFNTVI 134
A +V +M+N G + SV + NV L +D + A+ + R + V NV S+N VI
Sbjct: 194 ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVI 253
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+C RIKEA LL M KG PD ++Y+T++ + L + L + MK++ +
Sbjct: 254 HFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL-DKVWKLIEVMKRKGL 312
Query: 195 PVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
Y S+I LLC + +A + F+EMI G P V Y LI +C R ++ A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
F M R +TPD + +I+ FC+ G++ +A ++ EM +G+ P++ T+++LI+ C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
+ +AF + M+ G SP Y L+ C G+ A L EM G
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG------ 486
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
P++ TYN+++ G C G +EEA+ ++ L+ D V+Y ++ +CK GE+ K
Sbjct: 487 --LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE-VNYNSVINAYCAEGEVSKALILHDEME 492
A E++ EM L KGL V +N ++N +C G
Sbjct: 545 AQEILKEM----------------LGKGLQPTIVTFNVLMNGFCLHG------------- 575
Query: 493 HHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEF 551
ML DG E LL + T+++L++ C N
Sbjct: 576 ------------MLEDG-----------EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 552 KSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYME 611
K+ + K RG+ PDG Y L+ HC+ RN+ +A+ ++ E
Sbjct: 613 KAATAIYKDMCSRGV----------------GPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 612 MVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFELHKALSETGVIVRE 671
M GF+ + + LIK + E R V + R E+ S+T +
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY---K 713
Query: 672 DKVKDVLLNVLAEI 685
K D +++ + EI
Sbjct: 714 GKRPDTIVDPIDEI 727
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 145/495 (29%), Positives = 229/495 (46%), Gaps = 65/495 (13%)
Query: 72 DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVV 128
D + A V E G +VA+YN+++H C+ R+ EA +L M ++ P+V+
Sbjct: 223 DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 129 SFNTVIDGLC--------------AKR---------------------RIKEAEELLQEM 153
S++TV++G C KR ++ EAEE EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIA-LYDQMKQQRIPVPWTTYTSLIHLLCTY- 211
+G+ PD+V Y TLI K + IRA + + +M + I TYT++I C
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGD--IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++ +A K+F EM G EP VT+ ELI+ YC ++DA + M G +P+ V
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
TLI CK G+L+ A E+ EM + G+ PN TY+ +++ LC + EA L E
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
GL+ Y L+ AYC GE KA + EM+ KG P++VT+N L+ G C
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG--------LQPTIVTFNVLMNGFC 572
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
L G +E+ +L M ++P+ ++N ++ +C L A + +M RGV
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS----RGVG 628
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
D Y +++ +C + +A L EM+ G + Y +L GF
Sbjct: 629 -----------PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 512 KKARTRGAKESLLRM 526
K+ + A+E +M
Sbjct: 678 KRKKFLEAREVFDQM 692
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 197/414 (47%), Gaps = 21/414 (5%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARE---SLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSV 95
G L K + M RKGL P S+I LLC C + + A+ SEM+ G LP
Sbjct: 295 GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF---SEMIRQGILPDT 351
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
Y L+ +C+ + A M + P+V+++ +I G C + EA +L E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY- 211
M KGL PDSVT+ LI K ++ A +++ M Q TYT+LI LC
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMK-DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++D A ++ EM G +P++ TYN +++ C +++A+ + GL D V
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
TL+ +CK GE++KA E+ EM+ +G+ P T++ L++ C L + L ML
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
G++P + +LV YC+ A + +M +G PD TY L+ G+C
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG--------KTYENLVKGHC 642
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
++EA + + M S +Y+++I GF K + +A E+ +M G
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 146/329 (44%), Gaps = 40/329 (12%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATY 98
G +++ EM KGL+P + L+ C +A++V + M+ +G P+V TY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 99 NVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
L+ C++ +D A +L M ++PN+ ++N++++GLC I+EA +L+ E +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 156 KGLAPDSVTYNTLITAMSKNT------------------------NLVIRAIALYDQMKQ 191
GL D+VTY TL+ A K+ N+++ L+ ++
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 192 QRIPVPW----------TTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIH 240
+ W TT+ SL+ C N + A ++ +M + G P TY L+
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
+C +++A +F+ M +G + + LI F K + +A E+ +M G+
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREML 329
+ + + D +R D E++
Sbjct: 700 DKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 228/453 (50%), Gaps = 34/453 (7%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSF 130
C + A K+L + SG +P V TYNV++ YC+ ++ A+ +L M+V P+VV++
Sbjct: 148 CRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTY 207
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
NT++ LC ++K+A E+L M + PD +TY LI A +++ V A+ L D+M+
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLDEMR 266
Query: 191 QQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
+ TY L++ +C +D+A K +M +SG +P+++T+N ++ + C R
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
DA + M +G +P V N LI F C+ G L +A ++ +M + G PN+ +Y+ L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
C ++++ A + M+ G P Y ++ A C G+ A + +++ KG
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG-- 444
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
SP L+TYN +I G G+ +A+ +L M L PD ++Y+ ++ G + G
Sbjct: 445 ------CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Query: 430 ELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL----------------------SDEVN 467
++ +A + E E GIR + F+S+M GL +E +
Sbjct: 499 KVDEAIKFFHEF-ERMGIR-PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 468 YNSVINAYCAEGEVSKALILHDEMEHHGSLRAS 500
Y +I EG +AL L +E+ + G ++ S
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKGLMKKS 589
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 224/524 (42%), Gaps = 74/524 (14%)
Query: 87 VNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRI 143
VNS F N L R ++E L M P+++ T+I G C +
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 144 KEAEELLQEMNSKGLAPDSVTYNTLITAMSK---------------------NTNLVIRA 182
++A ++L+ + G PD +TYN +I+ K N ++R+
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRS 213
Query: 183 IALYDQMKQ---------QRIPVP-WTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPS 231
+ ++KQ QR P TYT LI C V A K+ EM G P
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 232 LVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRA 291
+VTYN L++ C R+ +A+ MP G P+ + N ++ C G A ++ A
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 292 EMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVG 351
+M+ +G P+ T++ LI+ LC + L A D+ +M G P +Y L+ +C
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 352 EFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSL 411
+ +A + M+ +G PD +VTYN ++ C G+VE+A+ IL ++
Sbjct: 394 KMDRAIEYLERMVSRGCYPD--------IVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 412 SPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSV 471
SP ++YN VI G K G+ GKA +L+ EM R DL D + Y+S+
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEM------RAKDLK---------PDTITYSSL 490
Query: 472 INAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLC 531
+ EG+V +A+ E E G +V + + G K +T A + L+ M C
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 532 TSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLN 575
T +Y LIE G G+ EA +LN
Sbjct: 551 KPNET-SYTILIE---------------GLAYEGMAKEALELLN 578
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 184/435 (42%), Gaps = 49/435 (11%)
Query: 204 LIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL 263
L ++ T +++ +K M+ G P ++ LI +C + + A I + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFD 323
PD + N +I+ +CK GE+ A + M + P+ TY+ ++ LC +L +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 324 LFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTY 383
+ ML P Y L+ A C A L DEM +G PD +VTY
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD--------VVTY 277
Query: 384 NALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE 443
N L+ G C GR++EA+ L M P+ +++NI++ C G A +L+ +M
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-- 335
Query: 444 AGGIRGVDLAVFSSLMKGLSDE-VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVL 502
L KG S V +N +IN C +G + +A+ + ++M HG S+
Sbjct: 336 --------------LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 503 YIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVEL---- 557
Y L GF K+ + A E L RM C TY+T++ C + + + VE+
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYP-DIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 558 ---------------AKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNV 602
G G +A +L+ + + KPD Y+ L+ R V
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 603 DKAYNMYMEMVHYGF 617
D+A + E G
Sbjct: 501 DEAIKFFHEFERMGI 515
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 142/266 (53%), Gaps = 5/266 (1%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
+A K+L++M+ GF PSV T+N+L++ CR + A+ IL M +PN +S+N ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
G C ++++ A E L+ M S+G PD VTYNT++TA+ K+ V A+ + +Q+ +
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK-VEDAVEILNQLSSKGC 445
Query: 195 PVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
TY ++I L KA K+ EM A +P +TY+ L+ +V +A+
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
F G+ P+AV N+++ CK + ++A + M+ RG PN +Y+ LI+ L
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYA 339
+ EA +L E+ GL + A
Sbjct: 566 YEGMAKEALELLNELCNKGLMKKSSA 591
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 138/340 (40%), Gaps = 56/340 (16%)
Query: 350 VGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEM 409
GE + F + M++ G +PD ++ LI G C LG+ +A IL +
Sbjct: 115 TGELEEGFKFLENMVYHGNVPD--------IIPCTTLIRGFCRLGKTRKAAKILEILEGS 166
Query: 410 SLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE---- 465
PD ++YN++ISG+CK GE+ A ++ M + D+ ++++++ L D
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS-----PDVVTYNTILRSLCDSGKLK 221
Query: 466 ------------------VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
+ Y +I A C + V A+ L DEM G V Y +L
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 508 DGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVE-----LAKGF 561
+G K+ R A + L M C T++ ++ + CS + + L KGF
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQP-NVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 562 G--------------MRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYN 607
+GL A +L + Q +P+ YN L+ C+ + +D+A
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 608 MYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
MV G + + ++ AL G+ + ++ +
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 36/257 (14%)
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA 453
G +EE L M PD + +I GFC+LG+ KA +++ ++ +G +
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV------ 169
Query: 454 VFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
D + YN +I+ YC GE++ AL + D M + V Y +
Sbjct: 170 ---------PDVITYNVMISGYCKAGEINNALSVLDRMSVSPDV---VTYNTILRSLCDS 217
Query: 514 ARTRGAKESLLRMFYDLCTSLPTFTYDTLIE-NCSNNEFKSVVELAKGFGMRGLKNEAAS 572
+ + A E L RM C TY LIE C ++ G G A
Sbjct: 218 GKLKQAMEVLDRMLQRDCYP-DVITYTILIEATCRDS----------GVG------HAMK 260
Query: 573 VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALF 632
+L+ + PD YN L+ C+ +D+A +M G ++ + +++++
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 633 HVGRHNEVRRVIQNVLR 649
GR + +++ ++LR
Sbjct: 321 STGRWMDAEKLLADMLR 337
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 234/485 (48%), Gaps = 55/485 (11%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG---MAVEPNV 127
C + Q A VL++M+ G+ P + T + LL+ YC KR+ +A+ ++ M +P+
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
+F T+I GL + EA L+ +M +G PD VTY T++ + K ++ + A++L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL-ALSLLK 247
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M++ +I Y ++I LC Y ++D A +FTEM G P + TY+ LI C
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
R DA + M +R + P+ V + LI F K G+L +A ++ EM++R I P+ TYS
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
LI+ C RL EA +F M+ P Y L+ +C + L EM +
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 367 GFLPDFVTEFS---------------------------PSLVTYNALIYGNCLLGRVEEA 399
G + + VT + P+++TYN L+ G C G++ +A
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLM 459
+ + + ++ PD +YNI+I G CK G++ +EL + +
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS----------------L 531
Query: 460 KGLSDEV-NYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTR- 517
KG+S V YN++I+ +C +G +A L +M+ G L S Y L +AR R
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI-----RARLRD 586
Query: 518 GAKES 522
G +E+
Sbjct: 587 GDREA 591
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/590 (26%), Positives = 272/590 (46%), Gaps = 52/590 (8%)
Query: 72 DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVV 128
D ++ D+A + +MV S PS+ +N LL A + + + + + ++ + + ++
Sbjct: 60 DIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
+++ I+ C + ++ A +L +M G PD VT ++L+ ++ + A+AL DQ
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC-HSKRISDAVALVDQ 178
Query: 189 MKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
M + T+T+LIH L +N +A + +M+ G +P LVTY +++ C R
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
+ A+ + + M + D VI NT+I CKY ++ A + EM +GI P+ TYS
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
LI CLC R S+A L +M+ ++P + L+ A+ G+ +A L DEMI +
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
PD + TY++LI G C+ R++EA + M P+ V+Y+ +I GFCK
Sbjct: 359 IDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALIL 487
+ + EL EM + G + + V Y ++I+ + + A ++
Sbjct: 411 AKRVEEGMELFREMSQRGLV---------------GNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 488 HDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP-TFTYDTLIEN- 545
+M G + Y +L DG K + AK ++ + T P +TY+ +IE
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKL--AKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 546 CSNNEFKSVVEL-------------------AKGFGMRGLKNEAASVLNTVLQWNYKPDG 586
C + + EL GF +G K EA S+L + + P+
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 587 AVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
YN LI R + + + + EM GFA S + L+ + H GR
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA-STIGLVTNMLHDGR 622
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/546 (23%), Positives = 241/546 (44%), Gaps = 52/546 (9%)
Query: 110 RVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
+VD+A+ + M P++V FN ++ + + + L ++M + G++ D TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIA 225
I + + L + L MK P T +SL++ C + + A + +M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEP-DIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
G++P T+ LIH ++ +A+ + M RG PD V T++ CK G+++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
A + +M + I + Y+ +ID LC + + +A +LF EM G+ P + Y +L+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
C G +S A L +MI + + +P++VT++ALI G++ EA +
Sbjct: 302 CLCNYGRWSDASRLLSDMIER--------KINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 406 MAEMSLSPDDVSYNIVISGFC---KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
M + S+ PD +Y+ +I+GFC +L E FELM+ D
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------------------CF 395
Query: 463 SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKES 522
+ V Y+++I +C V + + L EM G + +V Y L GF +AR +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF-FQARDCDNAQM 454
Query: 523 LLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWN 581
+ + + TY+ L++ C N + LAK A V + +
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGK------LAK----------AMVVFEYLQRST 498
Query: 582 YKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVR 641
+PD YN +I C+ V+ + ++ + G + ++ + +I G E
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 642 RVIQNV 647
+++ +
Sbjct: 559 SLLKKM 564
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 191/436 (43%), Gaps = 39/436 (8%)
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
VD A +F +M+ S PS+V +N+L+ A ++ + + + M G++ D +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
I FC+ +L A + A+M++ G P+ T S L++ C +R+S+A L +M+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
P + + L+ L + S+A L D+M+ +G PD LVTY ++ G C
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD--------LVTYGTVVNGLCK 235
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
G ++ AL +L+ M + + D V YN +I G CK + A L EMD G IR
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG-IR---- 290
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
D Y+S+I+ C G S A L +M V + L D F K
Sbjct: 291 ----------PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 513 KARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAAS 572
+ + A++ YD +I+ + + + L GF M +EA
Sbjct: 341 EGKLVEAEK----------------LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 573 VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALF 632
+ ++ + P+ Y+ LI C+ + V++ ++ EM G + + LI F
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 633 HVGRHNEVRRVIQNVL 648
+ + V + ++
Sbjct: 445 QARDCDNAQMVFKQMV 460
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 165/386 (42%), Gaps = 54/386 (13%)
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFH-----LRDEMIHKGFLPDFVTEFS------- 377
G G P ++FNL G+ C F+ A LR+ + + D V F
Sbjct: 20 GIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRP 79
Query: 378 -PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
PS+V +N L+ + + E + + M + +S D +Y+I I+ FC+ +L A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLA-- 137
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMK-GLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
LAV + +MK G D V +S++N YC +S A+ L D+M
Sbjct: 138 ---------------LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSV 554
G + + L G + A + +M C TY T++
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP-DLVTYGTVVN---------- 231
Query: 555 VELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
G RG + A S+L + + + D +YN +I C+ +++D A N++ EM +
Sbjct: 232 -----GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 615 YGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL-RSCNINGFE---LHKALSETGVIVR 670
G +F+ +LI L + GR ++ R++ +++ R N N L A + G +V
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 671 EDKVKDVLL--NVLAEIAMDGLLLNG 694
+K+ D ++ ++ +I L+NG
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLING 372
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 169/646 (26%), Positives = 281/646 (43%), Gaps = 105/646 (16%)
Query: 74 LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSF 130
L D A K+ M+ G +P TY+VL+ C+ KR+++A +L M V + ++
Sbjct: 256 LNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD--- 187
+ +IDGL R A+ L+ EM S G+ Y+ I MSK ++ +A AL+D
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKE-GVMEKAKALFDGMI 374
Query: 188 --------------------------------QMKQQRIPVPWTTYTSLIHLLCTY-NVD 214
+MK++ I + TY +++ +C+ ++D
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
AY + EMIASG P++V Y LI + R DAM + + M ++G+ PD N+LI
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
K +++A EMVE G+ PNA TY I + A +EM G+
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT-------------------- 374
P + L+ YC G+ +A M+ +G L D T
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 375 -------EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
+P + +Y LI G LG +++A I M E L+P+ + YN+++ GFC+
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL-SDEVNYNSVINAYCAEGEVSKALI 486
GE+ KA EL+ EM +KGL + V Y ++I+ YC G++++A
Sbjct: 675 SGEIEKAKELLDEMS----------------VKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 487 LHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENC 546
L DEM+ G + S +Y L DG + D+ ++ F +
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCR--------------LNDVERAITIFGTNKKGCAS 764
Query: 547 SNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNY----KPDGAVYNFLIVEHCRRRNV 602
S F +++ FG LK E VLN ++ ++ KP+ YN +I C+ N+
Sbjct: 765 STAPFNALINWVFKFGKTELKTE---VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 603 DKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL 648
+ A ++ +M + + + +L+ +GR E+ V +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 162/573 (28%), Positives = 245/573 (42%), Gaps = 77/573 (13%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C D AY ++ EM+ SG P+V Y L+ + ++ R +AM +L+ M + P++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL--------- 178
+N++I GL +R+ EA L EM GL P++ TY I+ + +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 179 -------------------------VIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYN 212
VI A + Y M Q I TYT L++ L
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
VD A ++F EM G P + +Y LI+ + +Q A IF M + GLTP+ +I N
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
L+ FC+ GE+EKA E+ EM +G+ PNA TY +ID C L+EAF LF EM G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
L P + Y LV C + + +A + KG + S +NALI
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGC--------ASSTAPFNALINWVFK 778
Query: 393 LGRVEEALGILRGMAEMSLS----PDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIR 448
G+ E +L + + S P+DV+YNI+I CK G L A EL +M A +
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Query: 449 GVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFD 508
V + Y S++N Y G ++ + DE G ++Y ++ +
Sbjct: 839 TV---------------ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 509 GFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKN 568
F K+ T A + +MF +++ + L GF G
Sbjct: 884 AFLKEGMTTKALVLVDQMFAK-----------NAVDDGCKLSISTCRALLSGFAKVGEME 932
Query: 569 EAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRN 601
A V+ +++ Y PD A LI E C N
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 151/593 (25%), Positives = 244/593 (41%), Gaps = 67/593 (11%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVV----SFNT 132
+ A V S + +P ++ VLL A R R+D + +GM VE NVV +++
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM-VERNVVFDVKTYHM 226
Query: 133 VIDGLC---------------------AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITA 171
+I C A + A +L + M KGL P TY+ LI
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDG 286
Query: 172 MSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEP 230
+ K L A +L +M + + TY+ LI LL N D A + EM++ G
Sbjct: 287 LCKIKRLE-DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 231 SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMR 290
Y+ I ++ A +F GM GL P A +LI +C+ + + +E+
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 291 AEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLV 350
EM +R I+ + TY ++ +C L A+++ +EM+ G P Y L+ +
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 351 GEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMS 410
F A + EM +G PD + YN+LI G R++EA L M E
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPD--------IFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 411 LSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNS 470
L P+ +Y ISG+ + E A + + EM E G L ++V
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECG---------------VLPNKVLCTG 562
Query: 471 VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDL 530
+IN YC +G+V +A + M G L + Y +L +G K + A+E + R
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE-IFREMRGK 621
Query: 531 CTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYN 590
+ F+Y LI GF G +A+S+ + +++ P+ +YN
Sbjct: 622 GIAPDVFSYGVLI---------------NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 591 FLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRV 643
L+ CR ++KA + EM G + + +I G E R+
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 179/444 (40%), Gaps = 65/444 (14%)
Query: 233 VTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAE 292
V + L Y + +++A+ +F L P C L+ ++ L+ +++
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 293 MVERGILPNADTYSKLIDCLCPQRRLSEAFD-LFREMLGGGLSPREY--AYFNLVGAYCL 349
MVER ++ + TY LI C + D LF+ + +E+ A N+ G
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK-------TEKEFRTATLNVDG---- 260
Query: 350 VGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEM 409
A L++ MI KG + P TY+ LI G C + R+E+A +L M +
Sbjct: 261 ------ALKLKESMICKGLV--------PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSL 306
Query: 410 SLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYN 469
+S D+ +Y+++I G K A L+ EM G+++ + Y+
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS----HGINIKPYM-----------YD 351
Query: 470 SVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYD 529
I EG + KA L D M G + + Y L +G+ ++ R E L+ M
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 530 LCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRG---------------LKN----E 569
P +TY T+++ CS+ + + K G L+N +
Sbjct: 412 NIVISP-YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 570 AASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIK 629
A VL + + PD YN LI+ + + +D+A + +EMV G + F+ A I
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 630 ALFHVGRHNEVRRVIQNVLRSCNI 653
+ ++ +R C +
Sbjct: 531 GYIEASEFASADKYVKE-MRECGV 553
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 31/302 (10%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
SG + K + EM+ KGL P + ++ C A+++ EM G +P
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 98 YNVLLHAYCRDKRVDEAMGIL----RGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
Y L+ CR V+ A+ I +G A + FN +I+ + + + E+L +
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCA--SSTAPFNALINWVFKFGKTELKTEVLNRL 792
Query: 154 NSKGL----APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
P+ VTYN +I + K NL A L+ QM+ + TYTSL++
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLE-AAKELFHQMQNANLMPTVITYTSLLN--- 848
Query: 210 TYNVDKA------YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM----- 258
DK + VF E IA+G EP + Y+ +I+A+ A+ + M
Sbjct: 849 --GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID--CLCPQR 316
D G C L++ F K GE+E A ++ MV +P++ T +LI+ C+ +
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQ 966
Query: 317 RL 318
R+
Sbjct: 967 RV 968
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 259/584 (44%), Gaps = 68/584 (11%)
Query: 86 MVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTVIDGLCAKRR 142
MV S LPS+ +N LL A + K+ D + + ++ + + N+ ++N +I+ C + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 143 IKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYT 202
I A LL +M G P VT ++L+ + A+AL DQM + T+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEMGYRPDTITFT 119
Query: 203 SLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR 261
+LIH L +N +A + M+ G +P+LVTY +++ C R + A + M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
+ D VI NT+I CKY ++ A + EM +GI PN TYS LI CLC R S+A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 322 FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
L +M+ ++P + L+ A+ G+F +A L D+MI + PD +
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD--------IF 291
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
TYN+LI G C+ R+++A + M PD +YN +I GFCK + EL EM
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 442 DEAGGIRGVDLAVFSSLMKGL----------------------SDEVNYNSVINAYCAEG 479
G + D +++L++GL D + Y+ +++ C G
Sbjct: 352 SHRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP---- 535
++ KAL + D M+ +Y + +G K + +DL SL
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG--------WDLFCSLSLKGV 461
Query: 536 ---TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFL 592
TY+T+I G + L EA ++L + + PD YN L
Sbjct: 462 KPNVVTYNTMIS---------------GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 593 IVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
I H R + + + EM F S + L+ + H GR
Sbjct: 507 IRAHLRDGDKAASAELIREMRSCRFVGDA-STIGLVANMLHDGR 549
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 219/457 (47%), Gaps = 33/457 (7%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG---MAVEPNV 127
C + Q A +L +M+ G+ PS+ T + LL+ YC KR+ +A+ ++ M P+
Sbjct: 56 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 115
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
++F T+I GL + EA L+ M +G P+ VTY ++ + K ++ + A L +
Sbjct: 116 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL-AFNLLN 174
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M+ +I + ++I LC Y +VD A +F EM G P++VTY+ LI C
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
R DA + M ++ + P+ V N LI F K G+ +A ++ +M++R I P+ TY+
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
LI+ C RL +A +F M+ P Y L+ +C L EM H+
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
G + D VTY LI G G + A + + M + PD ++Y+I++ G C
Sbjct: 355 GLVGD--------TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 427 KLGELGKAFEL------------------MVE-MDEAGGI-RGVDLAVFSSLMKGLSDEV 466
G+L KA E+ M+E M +AG + G DL SL + V
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 467 NYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLY 503
YN++I+ C++ + +A L +M+ G L S Y
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 182/426 (42%), Gaps = 39/426 (9%)
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
M+ S PS+ +N+L+ A + + + M G++ + N LI FC+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
+ A + +M++ G P+ T S L++ C +R+S+A L +M+ G P +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
L+ L + S+A L D M+ +G P+LVTY ++ G C G ++ A +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGC--------QPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
L M + D V +N +I CK + A L EM E GIR
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIR-------------- 217
Query: 463 SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKES 522
+ V Y+S+I+ C+ G S A L +M V + L D F K+ + A++
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK- 276
Query: 523 LLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNY 582
+D +I+ + + + L GF M ++A + ++ +
Sbjct: 277 ---------------LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 583 KPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRR 642
PD YN LI C+ + V+ ++ EM H G + LI+ LFH G + ++
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 643 VIQNVL 648
V + ++
Sbjct: 382 VFKQMV 387
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 39/179 (21%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI------------------- 117
DNA KV +MV+ G P + TY++LL C + ++++A+ +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 118 LRGM-------------------AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL 158
+ GM V+PNVV++NT+I GLC+KR ++EA LL++M G
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 159 APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAY 217
PDS TYNTLI A ++ + A L +M+ R +T + ++L +DK++
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASA-ELIREMRSCRFVGDASTIGLVANMLHDGRLDKSF 554
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 263/593 (44%), Gaps = 68/593 (11%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTV 133
D+A + MV S LPS+ +N LL A + K+ D + + ++ + + + ++N +
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I+ C + +I A LL +M G P VT ++L+ + A+AL DQM +
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEMG 185
Query: 194 IPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
T+T+LIH L +N +A + M+ G +P+LVTY +++ C R A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M + D VI NT+I CKY ++ A + EM +GI PN TYS LI CL
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C R S+A L +M+ ++P + L+ A+ G+F +A L D+MI + PD
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD- 364
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
+ TYN+L+ G C+ R+++A + M PD V+YN +I GFCK +
Sbjct: 365 -------IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMKGL----------------------SDEVNYNS 470
EL EM G + D +++L++GL D + Y+
Sbjct: 418 DGTELFREMSHRGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 471 VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDL 530
+++ C G++ KAL + D M+ +Y + +G K + +DL
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG--------WDL 527
Query: 531 CTSLP-------TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYK 583
SL TY+T+I G + L EA ++L + +
Sbjct: 528 FCSLSLKGVKPNVVTYNTMIS---------------GLCSKRLLQEAYALLKKMKEDGPL 572
Query: 584 PDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
P+ YN LI H R + + + EM F S + L+ + H GR
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA-STIGLVANMLHDGR 624
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 221/459 (48%), Gaps = 37/459 (8%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG---MAVEPNV 127
C + Q A +L +M+ G+ PS+ T + LL+ YC KR+ +A+ ++ M P+
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK--NTNLVIRAIAL 185
++F T+I GL + EA L+ M +G P+ VTY ++ + K +T+L A+ L
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL---ALNL 247
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
++M+ +I + ++I LC Y +VD A +F EM G P++VTY+ LI C
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
R DA + M ++ + P+ V N LI F K G+ +A ++ +M++R I P+ T
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
Y+ L++ C RL +A +F M+ P Y L+ +C L EM
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 365 HKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
H+G + D VTY LI G G + A + + M + PD ++Y+I++ G
Sbjct: 428 HRGLVGD--------TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 425 FCKLGELGKAFEL------------------MVE-MDEAGGI-RGVDLAVFSSLMKGLSD 464
C G+L KA E+ M+E M +AG + G DL SL +
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 465 EVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLY 503
V YN++I+ C++ + +A L +M+ G L S Y
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 180/421 (42%), Gaps = 42/421 (9%)
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
++ DA+G+F GM P V N L++ K + + + +M I+ TY+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
LI+C C + ++S A L +M+ G P +L+ YC S A L D+M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
G+ PD +T+ LI+G L + EA+ ++ M + P+ V+Y +V++G C
Sbjct: 185 GYRPD--------TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 427 KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALI 486
K G+ A L+ +M+ A K +D V +N++I++ C V AL
Sbjct: 237 KRGDTDLALNLLNKMEAA---------------KIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 487 LHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMF-YDLCTSLPTFT------- 538
L EME G V Y L R A + L M + +L TF
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 539 -----------YDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGA 587
YD +I+ + + + L GF M ++A + ++ + PD
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 588 VYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
YN LI C+ + V+ ++ EM H G + LI+ LFH G + ++V + +
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 648 L 648
+
Sbjct: 462 V 462
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 164/616 (26%), Positives = 274/616 (44%), Gaps = 91/616 (14%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR---G 120
+L++ LC Q + + +++ EM+ F PS A + L+ + +++EA+ +++
Sbjct: 302 TLVYGLCKVQ-EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 121 MAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
V PN+ +N +ID LC R+ EAE L M GL P+ VTY+ LI + L
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELI 239
A++ +M + + Y SLI+ C + ++ A EMI EP++VTY L+
Sbjct: 421 -ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL 299
YC + ++ A+ ++ M +G+ P TL++ + G + A ++ EM E +
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
PN TY+ +I+ C + +S+AF+ +EM G+ P Y+Y L+ CL G+ S+A
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
D + HKG + + Y L++G C G++EEAL + + M + + D V Y
Sbjct: 600 VDGL-HKG-------NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS---------------- 463
++I G K + F L+ EM + G D +++S++ S
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRG--LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 464 ------DEVNYNSVINAYCAEGEVSKALILHDEME------------------------- 492
+EV Y +VIN C G V++A +L +M+
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 493 ------HHGSLRA----SVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTL 542
H+ L+ + Y ML GF ++ R A E + RM D S TY T+
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD-GVSPDCITYTTM 828
Query: 543 I-ENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRN 601
I E C N+ K +EL N++ + +PD YN LI C
Sbjct: 829 INELCRRNDVKKAIEL----------------WNSMTEKGIRPDRVAYNTLIHGCCVAGE 872
Query: 602 VDKAYNMYMEMVHYGF 617
+ KA + EM+ G
Sbjct: 873 MGKATELRNEMLRQGL 888
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 165/660 (25%), Positives = 285/660 (43%), Gaps = 91/660 (13%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNV 127
C+ A ++++ M +G ++ YNVL+ C+ ++V EA+GI L G ++P+V
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 128 VSFNTVIDGLCA-----------------------------------KRRIKEAEELLQE 152
V++ T++ GLC + +I+EA L++
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY- 211
+ G++P+ YN LI ++ K A L+D+M + + TY+ LI + C
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFH-EAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
+D A EM+ +G + S+ YN LI+ +C + A G M ++ L P V
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
+L+ +C G++ KA + EM +GI P+ T++ L+ L + +A LF EM
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
+ P Y ++ YC G+ SKAF EM KG +PD +Y LI+G C
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD--------TYSYRPLIHGLC 588
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA------- 444
L G+ EA + G+ + + +++ Y ++ GFC+ G+L +A + EM +
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 445 -------GGIRGVDLAVFSSLMKGL------SDEVNYNSVINAYCAEGEVSKALILHDEM 491
G ++ D +F L+K + D+V Y S+I+A G+ +A + D M
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPT-FTYDTLIENCSNNE 550
+ G + V Y + +G K A+ +M +S+P TY ++ + E
Sbjct: 709 INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM--QPVSSVPNQVTYGCFLDILTKGE 766
Query: 551 --FKSVVE------------------LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYN 590
+ VE L +GF +G EA+ ++ ++ PD Y
Sbjct: 767 VDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYT 826
Query: 591 FLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
+I E CRR +V KA ++ M G + LI G + + +LR
Sbjct: 827 TMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 228/511 (44%), Gaps = 84/511 (16%)
Query: 53 MNRKGLDP--ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR 110
M + GL P S++ + C + + D A L EMV++G SV YN L++ +C+
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 111 VDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNT 167
+ A G + M +EP VV++ +++ G C+K +I +A L EM KG+AP T+ T
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIAS 226
L++ + + L+ A+ L+++M + + TY +I C ++ KA++ EM
Sbjct: 513 LLSGLFR-AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G P +Y LIH C + +A G+ + + L+ FC+ G+LE+A
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ EMV+RG+ + Y LID + F L +EM GL P + Y +++ A
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS---------------------------PS 379
G+F +AF + D MI++G +P+ VT + P+
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751
Query: 380 LVTY-----------------------------------NALIYGNCLLGRVEEALGILR 404
VTY N LI G C GR+EEA ++
Sbjct: 752 QVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELIT 811
Query: 405 GMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSD 464
M +SPD ++Y +I+ C+ ++ KA EL M E GIR D
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK-GIR--------------PD 856
Query: 465 EVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
V YN++I+ C GE+ KA L +EM G
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 172/742 (23%), Positives = 295/742 (39%), Gaps = 167/742 (22%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR------------------ 119
+ + VL L S +++++L+ Y R +RV + + + +
Sbjct: 139 DVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSAL 198
Query: 120 ----------GMAVE-----------PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL 158
G+A+E P+V + VI LC + + A+E++ M + G
Sbjct: 199 LHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGC 258
Query: 159 APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAY 217
+ V YN LI + K V A+ + + + + TY +L++ LC +
Sbjct: 259 DVNIVPYNVLIDGLCKKQK-VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFF 277
++ EM+ F PS + L+ R ++++A+ + + + D G++P+ + N LI
Sbjct: 318 EMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 278 CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
CK + +A + M + G+ PN TYS LID C + +L A EM+ GL
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS-------------------- 377
Y Y +L+ +C G+ S A EMI+K P VT S
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 378 -------PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGE 430
PS+ T+ L+ G G + +A+ + MAE ++ P+ V+YN++I G+C+ G+
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 431 LGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS----------------------DEVNY 468
+ KAFE + EM E G + D + L+ GL +E+ Y
Sbjct: 558 MSKAFEFLKEMTEKGIVP--DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 469 NSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFY 528
+++ +C EG++ +AL + EM G V Y +L DG K + R LL+ +
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG-SLKHKDRKLFFGLLKEMH 674
Query: 529 DLCTSLPTFTYDTLI---------------------ENCSNNEFKSVVELAKGFGMRGLK 567
D Y ++I E C NE + + G G
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVINGLCKAGFV 733
Query: 568 NEA----------ASVLNTVLQWNY-------------------------KPDGAVYNFL 592
NEA +SV N V + + A YN L
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNML 793
Query: 593 IVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCN 652
I CR+ +++A + M+ G + + +I L R N+V++ I
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC---RRNDVKKAI-------- 842
Query: 653 INGFELHKALSETGVIVREDKV 674
EL +++E G +R D+V
Sbjct: 843 ----ELWNSMTEKG--IRPDRV 858
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 196/439 (44%), Gaps = 50/439 (11%)
Query: 50 VSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
++EM K L+P + L+ C + + + A ++ EM G PS+ T+ LL R
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 108 DKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
+ +A+ + MA V+PN V++N +I+G C + + +A E L+EM KG+ PD+ +
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEM 223
Y LI + T A D + + + YT L+H C +++A V EM
Sbjct: 580 YRPLIHGLCL-TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 224 IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGEL 283
+ G + LV Y LI + G+ + M DRGL PD VI ++I K G+
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY--- 340
++AF + M+ G +PN TY+ +I+ LC ++EA L +M P + Y
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 341 -------------------------------FN-LVGAYCLVGEFSKAFHLRDEMIHKGF 368
+N L+ +C G +A L MI G
Sbjct: 759 LDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
SP +TY +I C V++A+ + M E + PD V+YN +I G C
Sbjct: 819 --------SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVA 870
Query: 429 GELGKAFELMVEMDEAGGI 447
GE+GKA EL EM G I
Sbjct: 871 GEMGKATELRNEMLRQGLI 889
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 173/340 (50%), Gaps = 13/340 (3%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARES---LIHLLCCDQLQNDNAYKVLSEMVNSGFLP-SVA 96
G + K + EM KG+ P S LIH LC ++ KV + ++ G +
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA--KVFVDGLHKGNCELNEI 613
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
Y LLH +CR+ +++EA+ + + M V+ ++V + +IDG + K LL+EM
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN- 212
+ +GL PD V Y ++I A SK + A ++D M + TYT++I+ LC
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFK-EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD-RVQDAMGIFRGMPDRGLTPDAVICN 271
V++A + ++M P+ VTY + + +Q A+ + + +GL + N
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYN 791
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
LI FC+ G +E+A E+ M+ G+ P+ TY+ +I+ LC + + +A +L+ M
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
G+ P AY L+ C+ GE KA LR+EM+ +G +P+
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 136/276 (49%), Gaps = 19/276 (6%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQNDNA--------YKVLSEMVNSGFL 92
G L + + EM ++G+D + L+C L + + + +L EM + G
Sbjct: 626 GKLEEALSVCQEMVQRGVD------LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK 679
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEEL 149
P Y ++ A + EA GI M E PN V++ VI+GLC + EAE L
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
+M P+ VTY + ++K + +A+ L++ + + + TY LI C
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL-ANTATYNMLIRGFC 798
Query: 210 TYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
+++A ++ T MI G P +TY +I+ C R+ V+ A+ ++ M ++G+ PD V
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
NTLI C GE+ KA E+R EM+ +G++PN T
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C Q + + A ++++ M+ G P TY +++ CR V +A+ + M + P+
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNT 167
V++NT+I G C + +A EL EM +GL P++ T T
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 195/732 (26%), Positives = 318/732 (43%), Gaps = 92/732 (12%)
Query: 22 FTAAAAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARES---LIHLLCCDQLQNDN 78
+T A GS+ + V+ LK EM ++ + P + LI++LC + +
Sbjct: 199 YTCNAILGSVVKSGEDVSVWSFLK------EMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
+Y ++ +M SG+ P++ TYN +LH YC+ R A+ +L M V+ +V ++N +I
Sbjct: 253 SY-LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 311
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
LC RI + LL++M + + P+ VTYNTLI S N V+ A L ++M +
Sbjct: 312 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS-NEGKVLIASQLLNEMLSFGLS 370
Query: 196 VPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
T+ +LI + N +A K+F M A G PS V+Y L+ C A G
Sbjct: 371 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 430
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
+ M G+ + +I CK G L++A + EM + GI P+ TYS LI+ C
Sbjct: 431 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 490
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
R A ++ + GLSP Y L+ C +G +A + + MI +G D
Sbjct: 491 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDH-- 548
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
T+N L+ C G+V EA +R M + P+ VS++ +I+G+ GE KA
Sbjct: 549 ------FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 602
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGLS----------------------DEVNYNSVI 472
F + EM + G + SL+KGL D V YN+++
Sbjct: 603 FSVFDEMTKVG--HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 473 NAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDG------------FDKKARTRG-- 518
A C G ++KA+ L EM L S Y L G F K+A RG
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 519 -AKESLLRMFYDLCTSLPTFTYDTLIENCSNN-----EFKSVVELAKGFGMRGLKNEAAS 572
+ + F D + +N + + + G+ G +
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 780
Query: 573 VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGF--------------- 617
+L + N P+ YN L+ + +R++V ++ +Y ++ G
Sbjct: 781 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Query: 618 ASHMFSV-LALIKALFHVGRHNEVRRVIQNVLRS-CNING-----FELHKALSETGVIVR 670
S+M + L ++KA + R EV R N+L S C NG F+L K ++ G+ +
Sbjct: 841 ESNMLEIGLKILKAF--ICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898
Query: 671 EDKVKDVLLNVL 682
+D D +++VL
Sbjct: 899 KDTC-DAMVSVL 909
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 171/656 (26%), Positives = 282/656 (42%), Gaps = 79/656 (12%)
Query: 50 VSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYC 106
+ M KG+D LIH LC + Y +L +M P+ TYN L++ +
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSN-RIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 107 RDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSV 163
+ +V A +L M + PN V+FN +IDG ++ KEA ++ M +KGL P V
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Query: 164 TYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTE 222
+Y L+ + KN + A Y +MK+ + V TYT +I LC +D+A + E
Sbjct: 410 SYGVLLDGLCKNAEFDL-ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
M G +P +VTY+ LI+ +C R + A I + GL+P+ +I +TLI C+ G
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
L++A + M+ G + T++ L+ LC +++EA + R M G+ P ++
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT------------------EFSPSL---- 380
L+ Y GE KAF + DEM G P F T +F SL
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 381 -----VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF 435
V YN L+ C G + +A+ + M + S+ PD +Y +ISG C+ G+ A
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 436 ELMVEMDEAGGIRGVDLAVFSSLMKGL----------------------SDEVNYNSVIN 473
E + G + + +++ + G+ D V N++I+
Sbjct: 709 LFAKEAEARGNVLP-NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 474 AYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS 533
Y G++ K L EM + Y +L G+ K R + LL L
Sbjct: 768 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK--RKDVSTSFLLYRSIILNGI 825
Query: 534 LP-TFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNF 591
LP T +L+ C +N + +++ K F RG+ + D +N
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV----------------EVDRYTFNM 869
Query: 592 LIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
LI + C ++ A+++ M G + + A++ L R E R V+ +
Sbjct: 870 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 153/635 (24%), Positives = 262/635 (41%), Gaps = 117/635 (18%)
Query: 59 DPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFL----PSVATYNVLLHAYCRDKRVDEA 114
DPAR L L L + + V ++ + L PSV Y++L+ Y R+ + ++
Sbjct: 129 DPARHILKEL----SLMSGKSSFVFGALMTTYRLCNSNPSV--YDILIRVYLREGMIQDS 182
Query: 115 MGILRGMAV---EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITA 171
+ I R M + P+V + N ++ + L+EM + + PD T+N L
Sbjct: 183 LEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL--- 239
Query: 172 MSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEP 230
I++LC + +K+ + +M SG+ P
Sbjct: 240 ---------------------------------INVLCAEGSFEKSSYLMQKMEKSGYAP 266
Query: 231 SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMR 290
++VTYN ++H YC + R + A+ + M +G+ D N LI C+ + K + +
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326
Query: 291 AEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLV 350
+M +R I PN TY+ LI+ + ++ A L EML GLSP + L+ +
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386
Query: 351 GEFSKAFHLRDEMIHKGFLPDFVT------------EFSPS---------------LVTY 383
G F +A + M KG P V+ EF + +TY
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446
Query: 384 NALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE 443
+I G C G ++EA+ +L M++ + PD V+Y+ +I+GFCK+G A E++ +
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506
Query: 444 AGGIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVL 502
GLS + + Y+++I C G + +A+ +++ M G R
Sbjct: 507 V----------------GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550
Query: 503 YIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP-TFTYDTLIENCSNN------------ 549
+ +L K + A+E + M D LP T ++D LI N+
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSD--GILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 550 --------EFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRN 601
F + L KG G EA L ++ D +YN L+ C+ N
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 602 VDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
+ KA +++ EMV ++ +LI L G+
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 192/439 (43%), Gaps = 33/439 (7%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE------PNVVSFNT 132
A + EMV LP TY L+ CR + + IL E PN V +
Sbjct: 672 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT--VIAILFAKEAEARGNVLPNKVMYTC 729
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+DG+ + K ++M++ G PD VT N +I S+ + + L +M Q
Sbjct: 730 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR-MGKIEKTNDLLPEMGNQ 788
Query: 193 RIPVPWTTYTSLIHLLCT-YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
TTY L+H +V ++ ++ +I +G P +T + L+ C + ++
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ I + RG+ D N LI+ C GE+ AF++ M GI + DT ++
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
L R E+ + EM G+SP Y L+ C VG+ AF +++EMI P
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 968
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
V E +A++ G+ +EA +LR M +M L P S+ ++ CK G +
Sbjct: 969 NVAE--------SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 1020
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
+A EL V M G+ L D V+YN +I CA+G+++ A L++EM
Sbjct: 1021 IEALELRVVMSNC----GLKL-----------DLVSYNVLITGLCAKGDMALAFELYEEM 1065
Query: 492 EHHGSLRASVLYIMLFDGF 510
+ G L + Y L G
Sbjct: 1066 KGDGFLANATTYKALIRGL 1084
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 170/705 (24%), Positives = 274/705 (38%), Gaps = 143/705 (20%)
Query: 53 MNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR 110
M KGL P+ S LL C + D A M +G TY ++ C++
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 111 VDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNT 167
+DEA+ +L M+ ++P++V+++ +I+G C R K A+E++ + GL+P+ + Y+T
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC------------------ 209
LI + + AI +Y+ M + T+ L+ LC
Sbjct: 519 LIYNCCR-MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 210 -----TYNVD-------------KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
T + D KA+ VF EM G P+ TY L+ C +++A
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ + D V+ NTL+T CK G L KA + EMV+R ILP++ TY+ LI
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 312 LCPQRRLSEAFDLFREMLG-GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP 370
LC + + A +E G + P + Y V G++ + R++M + G P
Sbjct: 698 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 757
Query: 371 ----------------------DFVTEFS-----PSLVTYNALIYGN------------- 390
D + E P+L TYN L++G
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 391 ----------------------CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
C +E L IL+ + D ++N++IS C
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 429 GELGKAFELMVEMDEAGGIRGVDL--AVFSSL-----------------MKGLSDEV-NY 468
GE+ AF+L+ M G D A+ S L +G+S E Y
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Query: 469 NSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFY 528
+IN C G++ A ++ +EM H +V + K + A +LL F
Sbjct: 938 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA--TLLLRFM 995
Query: 529 DLCTSLPTF-TYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGA 587
+PT ++ TL+ C N G EA + + K D
Sbjct: 996 LKMKLVPTIASFTTLMHLCCKN---------------GNVIEALELRVVMSNCGLKLDLV 1040
Query: 588 VYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALF 632
YN LI C + ++ A+ +Y EM GF ++ + ALI+ L
Sbjct: 1041 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 203/459 (44%), Gaps = 60/459 (13%)
Query: 230 PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
PS+ Y+ LI Y +QD++ IFR M G P CN ++ K GE +
Sbjct: 163 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL 349
EM++R I P+ T++ LI+ LC + ++ L ++M G +P Y ++ YC
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 350 VGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEM 409
G F A L D M KG D + TYN LI+ C R+ + +LR M +
Sbjct: 281 KGRFKAAIELLDHMKSKGVDAD--------VCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 332
Query: 410 SLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS-DEVNY 468
+ P++V+YN +I+GF G++ A +L+ EM L GLS + V +
Sbjct: 333 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEM----------------LSFGLSPNHVTF 376
Query: 469 NSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFY 528
N++I+ + +EG +AL + ME G + V Y +L DG K A A+ +RM
Sbjct: 377 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 436
Query: 529 D-LCTSLPTFTYDTLIENCSNNEF--KSVV---ELAK---------------GFGMRGLK 567
+ +C TY +I+ N F ++VV E++K GF G
Sbjct: 437 NGVCVG--RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494
Query: 568 NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLAL 627
A ++ + + P+G +Y+ LI CR + +A +Y M+ G F+ L
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554
Query: 628 IKALFHVGRHNEVRRVIQ----------NVLRSCNINGF 656
+ +L G+ E ++ V C ING+
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 40/200 (20%)
Query: 52 EMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
EM+++G+ P I L+ C A+ V EM+ P + ++ A +
Sbjct: 924 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 983
Query: 110 RVDEAMGILR---GMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
+ DEA +LR M + P + SF T++ C + EA EL M++ GL D V+YN
Sbjct: 984 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIAS 226
LIT + ++ + A++++ EM
Sbjct: 1044 VLITGLCAKGDMAL-----------------------------------AFELYEEMKGD 1068
Query: 227 GFEPSLVTYNELIHAYCCRD 246
GF + TY LI R+
Sbjct: 1069 GFLANATTYKALIRGLLARE 1088
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 221/461 (47%), Gaps = 47/461 (10%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG---MAVEPNV 127
C + Q A +L +M+ G+ PS+ T + LL+ YC KR+ +A+ ++ M P+
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
++F T+I GL + EA L+ M +G P+ VTY ++ + K ++ + A L +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL-AFNLLN 249
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M+ +I Y+++I LC Y + D A +FTEM G P+++TY+ LI C +
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
R DA + M +R + P+ V N LI F K G+L +A ++ EM++R I P+ TYS
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
LI+ C RL EA +F M+ P Y L+ +C + L EM +
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 367 GFLPDFVTEFS---------------------------PSLVTYNALIYGNCLLGRVEEA 399
G + + VT + P+++TYN L+ G C G++E+A
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLM 459
+ + + + P +YNI+I G CK G++ ++L + ++GV
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL----SLKGVK-------- 537
Query: 460 KGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRAS 500
D + YN++I+ +C +G +A L +M G L S
Sbjct: 538 ---PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 249/508 (49%), Gaps = 44/508 (8%)
Query: 85 EMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKR 141
+M G ++ TYN+L++ +CR ++ A+ +L M EP++V+ +++++G C +
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
RI +A L+ +M G PD++T+ TLI + + N A+AL D+M Q+ TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTY 228
Query: 202 TSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
+++ LC ++D A+ + +M A+ E ++V Y+ +I + C DA+ +F M +
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
+G+ P+ + ++LI+ C Y A + ++M+ER I PN T++ LID + +L E
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A L+ EM+ + P + Y +L+ +C+ +A H+ + MI K P+ +
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN--------V 400
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
VTYN LI G C R++E + + R M++ L + V+Y +I GF + + A + +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 441 MDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRAS 500
M G V ++M YN++++ C G++ KA+++ + ++
Sbjct: 461 MVSDG--------VHPNIM-------TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 501 VLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKG 560
Y ++ +G K G E +F L SL D +I N + G
Sbjct: 506 YTYNIMIEGMCKA----GKVEDGWDLFCSL--SLKGVKPDVIIYN----------TMISG 549
Query: 561 FGMRGLKNEAASVLNTVLQWNYKPDGAV 588
F +GLK EA ++ + + PD
Sbjct: 550 FCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 253/548 (46%), Gaps = 52/548 (9%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTV 133
D+A + MV S LPS+ +N LL A + K+ D + + ++ + + N+ ++N +
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I+ C + +I A LL +M G P VT ++L+ + A+AL DQM +
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEMG 185
Query: 194 IPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
T+T+LIH L +N +A + M+ G +P+LVTY +++ C R + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M + + VI +T+I CKY + A + EM +G+ PN TYS LI CL
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C R S+A L +M+ ++P + L+ A+ G+ +A L DEMI + PD
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD- 364
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
+ TY++LI G C+ R++EA + M P+ V+YN +I+GFCK +
Sbjct: 365 -------IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME 492
+ EL EM + G + + V Y ++I+ + + A ++ +M
Sbjct: 418 EGVELFREMSQRGLV---------------GNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 493 HHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSL--PT-FTYDTLIEN-CSN 548
G + Y L DG K G E + +F L S PT +TY+ +IE C
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKN----GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 549 NEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNM 608
+ + +L ++G+ KPD +YN +I CR+ ++A +
Sbjct: 519 GKVEDGWDLFCSLSLKGV----------------KPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 609 YMEMVHYG 616
+ +M G
Sbjct: 563 FRKMREDG 570
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 127/230 (55%), Gaps = 5/230 (2%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVID 135
A K+ EM+ P + TY+ L++ +C R+DEA + M + PNVV++NT+I+
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
G C +RI E EL +EM+ +GL ++VTY TLI + + A ++ QM +
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD-CDNAQMVFKQMVSDGVH 467
Query: 196 VPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
TY +L+ LC ++KA VF + S EP++ TYN +I C +V+D +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
F + +G+ PD +I NT+I+ FC+ G E+A + +M E G LP++ T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 181/433 (41%), Gaps = 42/433 (9%)
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
Y E++ ++ DA+G+F GM P N L++ K + + + +M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
GI N TY+ LI+C C + ++S A L +M+ G P +L+ YC S
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
A L D+M+ G+ PD +T+ LI+G L + EA+ ++ M + P+
Sbjct: 173 DAVALVDQMVEMGYRPD--------TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 415 DVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINA 474
V+Y +V++G CK G++ AF L+ +M+ A K ++ V Y++VI++
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAA---------------KIEANVVIYSTVIDS 269
Query: 475 YCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMF-YDLCTS 533
C AL L EME+ G + Y L R A L M + +
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 534 LPTFT------------------YDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLN 575
+ TF YD +I+ + + + L GF M +EA +
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 576 TVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVG 635
++ + P+ YN LI C+ + +D+ ++ EM G + + LI F
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Query: 636 RHNEVRRVIQNVL 648
+ + V + ++
Sbjct: 450 DCDNAQMVFKQMV 462
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 197/467 (42%), Gaps = 52/467 (11%)
Query: 208 LCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
L + +D A +F M+ S PS+ +N+L+ A + + + M G++ +
Sbjct: 61 LHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL 120
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
N LI FC+ ++ A + +M++ G P+ T S L++ C +R+S+A L +
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
M+ G P + L+ L + S+A L D M+ +G P+LVTY ++
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--------CQPNLVTYGVVV 232
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
G C G ++ A +L M + + V Y+ VI CK A L EM E G+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGV 291
Query: 448 RGVDLAVFSSLMKGL------SDE----------------VNYNSVINAYCAEGEVSKAL 485
R ++ +SSL+ L SD V +N++I+A+ EG++ +A
Sbjct: 292 RP-NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP-TFTYDTLIE 544
L+DEM Y L +GF R AK M C P TY+TLI
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIN 408
Query: 545 N-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVD 603
C VEL + RGL V NTV Y LI + R+ D
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGL------VGNTV----------TYTTLIHGFFQARDCD 452
Query: 604 KAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
A ++ +MV G ++ + L+ L G+ + V + + RS
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 127/238 (53%), Gaps = 11/238 (4%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDP---ARESLIHLLCC-DQLQNDNAYKVLSEMVNSGFLP 93
V G L++ EM ++ +DP SLI+ C D+L D A + M++ P
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL--DEAKHMFELMISKDCFP 398
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELL 150
+V TYN L++ +C+ KR+DE + + R M+ + N V++ T+I G R A+ +
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT 210
++M S G+ P+ +TYNTL+ + KN L +A+ +++ +++ ++ TY +I +C
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLE-KAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 211 Y-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
V+ + +F + G +P ++ YN +I +C + ++A +FR M + G PD+
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 142/326 (43%), Gaps = 42/326 (12%)
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAV 454
++++A+G+ GM + P +N ++S K+ K F+L++ + E G+ +
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKM----KKFDLVISLGEKMQRLGISHNL 120
Query: 455 FSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKA 514
++ YN +IN +C ++S AL L +M G + V L +G+
Sbjct: 121 YT-----------YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 515 RTRGAKESLLRMFYDLCTSLPTFTYDTLIENCS-NNEFKSVVEL---------------- 557
R A +L+ ++ T T+ TLI +N+ V L
Sbjct: 170 RISDAV-ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 558 ---AKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
G RG + A ++LN + + + +Y+ +I C+ R+ D A N++ EM +
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 615 YGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL-RSCNINGFELH---KALSETGVIVR 670
G ++ + +LI L + R ++ R++ +++ R N N + A + G +V
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 671 EDKVKDVLL--NVLAEIAMDGLLLNG 694
+K+ D ++ ++ +I L+NG
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLING 374
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 186/705 (26%), Positives = 304/705 (43%), Gaps = 95/705 (13%)
Query: 49 TVSEMNRKGLDPARE---SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAY 105
T+S M G+ P SLIH + L +D + S+M+ G P V NVL+H++
Sbjct: 80 TLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSF 139
Query: 106 CRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTY 165
C+ R+ A+ +LR + + V++NTVI GLC EA + L EM G+ PD+V+Y
Sbjct: 140 CKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY 199
Query: 166 NTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIA 225
NTLI K N V RA AL D++ + + T I L YN+ + + +M+
Sbjct: 200 NTLIDGFCKVGNFV-RAKALVDEISELNL------ITHTILLSSYYNLHAIEEAYRDMVM 252
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
SGF+P +VT++ +I+ C +V + + R M + + P+ V TL+ K
Sbjct: 253 SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRH 312
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
A + ++MV RGI + Y+ L+D L L EA F+ +L P Y LV
Sbjct: 313 ALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVD 372
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
C G+ S A + +M+ K +P+ +VTY+++I G G +EEA+ +LR
Sbjct: 373 GLCKAGDLSSAEFIITQMLEKSVIPN--------VVTYSSMINGYVKKGMLEEAVSLLRK 424
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM-------------------DEAGG 446
M + ++ P+ +Y VI G K G+ A EL EM G
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484
Query: 447 IRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIM 505
I+ V V + KG++ D++NY S+I+ + G+ AL +EM+ G V Y +
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544
Query: 506 LFDGFDK------------------------------KARTRGAKESLLRMFYDL--CTS 533
L G K R +G E +L+++ + C
Sbjct: 545 LISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 604
Query: 534 LPTFTYDTLIEN--CSNNEFKSVVELAKGFGMRGL---------------KNEAASVL-- 574
P+ ++ C N + + + + + + K++ A +
Sbjct: 605 KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFK 664
Query: 575 --NTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALF 632
T+L + K VYN LI C+ KA + +M GF + +L+ F
Sbjct: 665 THETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYF 724
Query: 633 ---HVGRHNEVRRVIQNVLRSCNINGFE-LHKALSETGVIVREDK 673
HV + V+ S N+ + + + LS+ G+I DK
Sbjct: 725 VGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK 769
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 161/689 (23%), Positives = 278/689 (40%), Gaps = 132/689 (19%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR-------DKRVDEAMGI------ 117
C+ D AY+ LSEMV G LP +YN L+ +C+ VDE +
Sbjct: 172 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHT 231
Query: 118 ---------------LRGMAV---EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLA 159
R M + +P+VV+F+++I+ LC ++ E LL+EM +
Sbjct: 232 ILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Query: 160 PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWT-------------------- 199
P+ VTY TL+ ++ K N+ A+ALY QM + IPV
Sbjct: 292 PNHVTYTTLVDSLFK-ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 200 ---------------TYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
TYT+L+ LC ++ A + T+M+ P++VTY+ +I+ Y
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
+ +++A+ + R M D+ + P+ T+I K G+ E A E+ EM G+ N
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 470
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
L++ L R+ E L ++M+ G++ + Y +L+ + G+ A +EM
Sbjct: 471 ILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 364 IHKGFLPDFVT--------------------------EFSPSLVTYNALIYGNCLLGRVE 397
+G D V+ P + T+N ++ G E
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 590
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM---------------- 441
L + M + P +S NIV+ C+ G++ +A ++ +M
Sbjct: 591 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650
Query: 442 DEAGGIRGVDLAVFSSLMKGLSDEVN-----YNSVINAYCAEGEVSKALILHDEMEHHGS 496
D + + D A+F + LS + YN++I C G KA ++ +ME G
Sbjct: 651 DTSSKHKRAD-AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 497 LRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVE 556
+ +V + L G+ + R A + M + S TY+T+I
Sbjct: 710 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMM-EAGISPNVATYNTII------------- 755
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
+G GL E L+ + +PD YN LI + N+ + +Y EM+ G
Sbjct: 756 --RGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 813
Query: 617 FASHMFSVLALIKALFHVGRHNEVRRVIQ 645
+ LI +VG+ + R +++
Sbjct: 814 LVPKTSTYNVLISEFANVGKMLQARELLK 842
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/503 (24%), Positives = 224/503 (44%), Gaps = 69/503 (13%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLC 138
++++M+ +P+V TY+ +++ Y + ++EA+ +LR M V PN ++ TVIDGL
Sbjct: 386 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 445
Query: 139 A---------------------------------KR--RIKEAEELLQEMNSKGLAPDSV 163
KR RIKE + L+++M SKG+ D +
Sbjct: 446 KAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQI 505
Query: 164 TYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN---VDKAYKVF 220
Y +LI K + ++M+++ +P +Y LI + + D AYK
Sbjct: 506 NYTSLIDVFFKGGDEEAALAWA-EEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGM 564
Query: 221 TEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKY 280
E G EP + T+N ++++ + + + ++ M G+ P + CN ++ C+
Sbjct: 565 RE---KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Query: 281 GELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
G++E+A + +M+ I PN TY +D +R F +L G+ Y
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 341 FNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEAL 400
L+ C +G KA + +M +GF+PD VT+N+L++G + V +AL
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPD--------TVTFNSLMHGYFVGSHVRKAL 733
Query: 401 GILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMK 460
M E +SP+ +YN +I G G + + + + EM ++ G+R
Sbjct: 734 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM-KSRGMR------------ 780
Query: 461 GLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAK 520
D+ YN++I+ G + ++ ++ EM G + + Y +L F + A+
Sbjct: 781 --PDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 838
Query: 521 ESLLRMFYDLCTSLPTFTYDTLI 543
E LL+ S T TY T+I
Sbjct: 839 E-LLKEMGKRGVSPNTSTYCTMI 860
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 224/535 (41%), Gaps = 106/535 (19%)
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
F+T+ + R+ A L M + G+ PDS +N+LI + N
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVN-------------- 106
Query: 190 KQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
L+H D+ ++++MIA G P + N LIH++C R+
Sbjct: 107 -------------GLVH-------DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS 146
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
A+ + R +R ++ D V NT+I+ C++G ++A++ +EMV+ GILP+ +Y+ LI
Sbjct: 147 FAISLLR---NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 203
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD---EMIHK 366
D C A L E+ + NL+ L+ + + + +M+
Sbjct: 204 DGFCKVGNFVRAKALVDEI----------SELNLITHTILLSSYYNLHAIEEAYRDMVMS 253
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
GF PD +VT++++I C G+V E +LR M EMS+ P+ V+Y ++
Sbjct: 254 GFDPD--------VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF 305
Query: 427 KLGELGKAFELMVEMDEAGGIRG--VDLAVFSSLMKGL---------------------- 462
K A L +M +RG VDL V++ LM GL
Sbjct: 306 KANIYRHALALYSQMV----VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV 361
Query: 463 SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKES 522
+ V Y ++++ C G++S A + +M + V Y + +G+ KK A S
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAV-S 420
Query: 523 LLRMFYDLCTSLPTFTYDTLIENC-SNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWN 581
LLR D FTY T+I+ + + +EL+K + G++ N
Sbjct: 421 LLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEEN-----------N 469
Query: 582 YKPDGAVYNFLIVEHCRR-RNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVG 635
Y D +V H +R + + + +MV G + +LI F G
Sbjct: 470 YILDA------LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 18/349 (5%)
Query: 86 MVNSGFLPSVATYNVLLHAYCRDKRV--DEAMGILRGMAVEPNVVSFNTVIDGLCAKRRI 143
M G V +YNVL+ + +V D A +R +EP++ +FN +++ ++R+
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMN---SQRKQ 586
Query: 144 KEAEELLQ---EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT 200
++E +L+ +M S G+ P ++ N ++ + +N + AI + +QM I TT
Sbjct: 587 GDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKME-EAIHILNQMMLMEIHPNLTT 645
Query: 201 YTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
Y + + D +K +++ G + S YN LI C + A + M
Sbjct: 646 YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDME 705
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
RG PD V N+L+ + + KA + M+E GI PN TY+ +I L +
Sbjct: 706 ARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIK 765
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
E EM G+ P ++ Y L+ +G + + EMI G +P
Sbjct: 766 EVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP--------K 817
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
TYN LI +G++ +A +L+ M + +SP+ +Y +ISG CKL
Sbjct: 818 TSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 152/335 (45%), Gaps = 16/335 (4%)
Query: 53 MNRKGLDPARESLIHLLCCDQLQNDNA--YKVLSEMVNSGFLPSVATYNVLLHAYCRDKR 110
M KG++P + ++ + Q D+ K+ +M + G PS+ + N+++ C + +
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 111 VDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNT 167
++EA+ IL M + PN+ ++ +D +R + + + S G+ YNT
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIAS 226
LI + K A+ + D + IP T+ SL+H +V KA ++ M+ +
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIP-DTVTFNSLMHGYFVGSHVRKALSTYSVMMEA 742
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G P++ TYN +I +++ M RG+ PD N LI+ K G ++ +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 802
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ EM+ G++P TY+ LI ++ +A +L +EM G+SP Y ++
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Query: 347 YCL------VGEFSKAFHLRDEMIHKGFLPDFVTE 375
C V KA +L + KG L + V E
Sbjct: 863 LCKLCTHPDVEWNKKAMYLAEA---KGLLKEMVEE 894
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 189/449 (42%), Gaps = 85/449 (18%)
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL-FREML 329
+TL + L A + M G++P++ ++ LI + + L + +M+
Sbjct: 62 HTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMI 121
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHL-RDEMIHKGFLPDFVTEFSPSLVTYNALIY 388
G+SP +A L+ ++C VG S A L R+ +I S VTYN +I
Sbjct: 122 ACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVI------------SIDTVTYNTVIS 169
Query: 389 GNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG--- 445
G C G +EA L M +M + PD VSYN +I GFCK+G +A L+ E+ E
Sbjct: 170 GLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLIT 229
Query: 446 ---------GIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEME--- 492
+ ++ A +M G D V ++S+IN C G+V + +L EME
Sbjct: 230 HTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMS 289
Query: 493 ----------------------HHGSLRAS----------VLYIMLFDGFDKKARTRGAK 520
H +L + V+Y +L DG K R A+
Sbjct: 290 VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAE 349
Query: 521 ESLLRMFYDLCTSLP-TFTYDTLIE------NCSNNEF-------KSVV-------ELAK 559
++ + D +P TY L++ + S+ EF KSV+ +
Sbjct: 350 KTFKMLLED--NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN 407
Query: 560 GFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFAS 619
G+ +G+ EA S+L + N P+G Y +I + + A + EM G
Sbjct: 408 GYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEE 467
Query: 620 HMFSVLALIKALFHVGRHNEVRRVIQNVL 648
+ + + AL+ L +GR EV+ ++++++
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMV 496
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 225/464 (48%), Gaps = 50/464 (10%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG---MAVEPNV 127
C + Q A VL++M+ G+ P + T + LL+ YC KR+ +A+ ++ M +P+
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
+F T+I GL + EA L+ +M +G PD VTY T++ + K ++ + A+ L +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL-ALNLLN 247
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M+ RI + ++I LC Y +V+ A +FTEM G P++VTYN LI+ C
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
R DA + M ++ + P+ V N LI F K G+L +A ++ EM++R I P+ TY+
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
LI+ C RL EA +F+ M+ P Y L+ +C L EM +
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 367 GFLPDFVT---------------------------EFSPSLVTYNALIYGNCLLGRVEEA 399
G + + VT ++TY+ L++G C G+++ A
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLM 459
L I + + + + + YN +I G CK G++G+A++L F SL
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL-----------------FCSLS 530
Query: 460 KGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLY 503
D V YN++I+ C++ + +A L +M+ G+L S Y
Sbjct: 531 IK-PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 148/591 (25%), Positives = 269/591 (45%), Gaps = 57/591 (9%)
Query: 72 DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVV 128
D ++ D+A + +MV S PS+ +N LL A + + + + + ++ + + ++
Sbjct: 60 DIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
+++ I+ C + ++ A +L +M G PD VT ++L+ ++ + A+AL DQ
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC-HSKRISDAVALVDQ 178
Query: 189 MKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
M + T+T+LIH L +N +A + +M+ G +P LVTY +++ C R
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
+ A+ + M + + VI NT+I CKY +E A ++ EM +GI PN TY+
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
LI+CLC R S+A L ML ++P + L+ A+ G+ +A L +EMI +
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
PD +TYN LI G C+ R++EA + + M P+ +YN +I+GFCK
Sbjct: 359 IDPD--------TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL----------------------SDE 465
+ EL EM + G + ++++++G +D
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNT--VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 466 VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLR 525
+ Y+ +++ C+ G++ AL++ ++ +Y + +G K + A +
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD---- 524
Query: 526 MFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPD 585
+F L TY+T+I G + L EA + + + P+
Sbjct: 525 LFCSLSIKPDVVTYNTMIS---------------GLCSKRLLQEADDLFRKMKEDGTLPN 569
Query: 586 GAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
YN LI + R + + + EM GF S ++L+ + H GR
Sbjct: 570 SGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA-STISLVTNMLHDGR 619
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 187/436 (42%), Gaps = 39/436 (8%)
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
VD A +F +M+ S PS+V +N+L+ A ++ + + + M G++ D +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
I FC+ +L A + A+M++ G P+ T S L++ C +R+S+A L +M+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
P + + L+ L + S+A L D+M+ +G PD LVTY ++ G C
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD--------LVTYGTVVNGLCK 235
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
G ++ AL +L M + + V +N +I CK + A +L EM E GIR
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIR---- 290
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
+ V YNS+IN C G S A L M V + L D F K
Sbjct: 291 ----------PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 513 KARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAAS 572
+ + A E L T TY+ LI GF M +EA
Sbjct: 341 EGKLVEA-EKLHEEMIQRSIDPDTITYNLLIN---------------GFCMHNRLDEAKQ 384
Query: 573 VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALF 632
+ ++ + P+ YN LI C+ + V+ ++ EM G + + +I+ F
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 633 HVGRHNEVRRVIQNVL 648
G + + V + ++
Sbjct: 445 QAGDCDSAQMVFKQMV 460
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 41/297 (13%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARES---LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
G L++ EM ++ +DP + LI+ C + D A ++ MV+ LP++ T
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN-RLDEAKQMFKFMVSKDCLPNIQT 400
Query: 98 YNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
YN L++ +C+ KRV++ + + R EM+ +G
Sbjct: 401 YNTLINGFCKCKRVEDGVELFR--------------------------------EMSQRG 428
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKA 216
L ++VTY T+I + + A ++ QM R+P TY+ L+H LC+Y +D A
Sbjct: 429 LVGNTVTYTTIIQGFFQAGD-CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 217 YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
+F + S E ++ YN +I C +V +A +F + + PD V NT+I+
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISG 544
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
C L++A ++ +M E G LPN+ TY+ LI + + +L +EM G
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 165/386 (42%), Gaps = 54/386 (13%)
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFH-----LRDEMIHKGFLPDFVTEFS------- 377
G G P ++FNL G+ C F+ A LR+ + + D V F
Sbjct: 20 GIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRP 79
Query: 378 -PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
PS+V +N L+ + + E + + M + +S D +Y+I I+ FC+ +L A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLA-- 137
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMK-GLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
LAV + +MK G D V +S++N YC +S A+ L D+M
Sbjct: 138 ---------------LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSV 554
G + + L G + A + +M C TY T++
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP-DLVTYGTVVN---------- 231
Query: 555 VELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
G RG + A ++LN + K + ++N +I C+ R+V+ A +++ EM
Sbjct: 232 -----GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 615 YGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLR---SCNINGFE-LHKALSETGVIVR 670
G ++ + +LI L + GR ++ R++ N+L + N+ F L A + G +V
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 671 EDKVKDVLL--NVLAEIAMDGLLLNG 694
+K+ + ++ ++ + LL+NG
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLING 372
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE 124
L+H LC + D A + + S ++ YN ++ C+ +V EA + ++++
Sbjct: 474 LLHGLC-SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK 532
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
P+VV++NT+I GLC+KR ++EA++L ++M G P+S TYNTLI A ++ + A
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA-E 591
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAY 217
L +M+ +T + + ++L +DK++
Sbjct: 592 LIKEMRSSGFVGDASTISLVTNMLHDGRLDKSF 624
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/568 (26%), Positives = 262/568 (46%), Gaps = 58/568 (10%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVD---EAMGILRGMAVEPNVVSFN 131
Q D + +M G ++ T +++++ +CR +++ AMG + + EPN ++F+
Sbjct: 103 QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFS 162
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
T+I+GLC + R+ EA EL+ M G PD +T NTL+ + + A+ L D+M +
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA-EAMLLIDKMVE 221
Query: 192 QRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
TY +++++C + A ++ +M + V Y+ +I C + +
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
A +F M +G+T + + N LI FC G + ++ +M++R I PN T+S LID
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP 370
+ +L EA +L +EM+ G++P Y +L+ +C KA + D M+ KG
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC-- 399
Query: 371 DFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGE 430
P++ T+N LI G C R+++ L + R M+ + D V+YN +I GFC+LG+
Sbjct: 400 ------DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 431 LGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDE 490
L A EL EM V V ++ V Y +++ C GE KAL + ++
Sbjct: 454 LNVAKELFQEM--------VSRKVPPNI-------VTYKILLDGLCDNGESEKALEIFEK 498
Query: 491 MEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP-------TFTYDTLI 543
+E +Y ++ G ++ A +DL SLP TY+ +I
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDA--------WDLFCSLPLKGVKPGVKTYNIMI 550
Query: 544 ENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVD 603
G +G +EA + + + + PDG YN LI H +
Sbjct: 551 ---------------GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDAT 595
Query: 604 KAYNMYMEMVHYGFASHMFSVLALIKAL 631
K+ + E+ GF+ ++ +I L
Sbjct: 596 KSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 209/446 (46%), Gaps = 60/446 (13%)
Query: 34 EPKKVTSGGLLKT------TTTVSEMNRK------GLDPARESLIHLLCCDQLQNDNAYK 81
+P VT G +L T E+ RK LD + S+I C DNA+
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLC 138
+ +EM G ++ TYN+L+ +C R D+ +LR M + PNVV+F+ +ID
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW 198
+ +++EAEEL +EM +G+APD++TY +LI K +L
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL-------------------- 384
Query: 199 TTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
DKA ++ M++ G +P++ T+N LI+ YC +R+ D + +FR M
Sbjct: 385 ---------------DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRL 318
RG+ D V NTLI FC+ G+L A E+ EMV R + PN TY L+D LC
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 319 SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSP 378
+A ++F ++ + Y ++ C + A+ L + KG P
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG--------VKP 541
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
+ TYN +I G C G + EA + R M E +PD +YNI+I G+ K+ +L+
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 439 VEMDEAGGIRGVDLAVFSSLMKGLSD 464
E+ G VD + ++ LSD
Sbjct: 602 EELKRCG--FSVDASTIKMVIDMLSD 625
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 235/506 (46%), Gaps = 86/506 (16%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVID 135
A+ + +++ G+ P+ T++ L++ C + RV EA+ ++ M +P++++ NT+++
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
GLC + EA L+ +M G P++VTY ++ M K+ + A+ L +M+++ I
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL-AMELLRKMEERNIK 260
Query: 196 VPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
+ Y+ +I LC + ++D A+ +F EM G +++TYN LI +C R D +
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
R M R + P+ V + LI F K G+L +A E+ EM+ RGI P+ TY+ LID C
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Query: 315 QR-----------------------------------RLSEAFDLFREMLGGGLSPREYA 339
+ R+ + +LFR+M G+
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT------------------------- 374
Y L+ +C +G+ + A L EM+ + P+ VT
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 375 --EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
+ + YN +I+G C +V++A + + + P +YNI+I G CK G L
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME 492
+A L +M+E G D YN +I A+ +G+ +K++ L +E++
Sbjct: 561 EAELLFRKMEEDGHA---------------PDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Query: 493 HHG-SLRASVLYI---MLFDGFDKKA 514
G S+ AS + + ML DG KK+
Sbjct: 606 RCGFSVDASTIKMVIDMLSDGRLKKS 631
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 205/467 (43%), Gaps = 52/467 (11%)
Query: 208 LCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
L D A +F +MI S P+++ ++ L A + + + + M +G+ +
Sbjct: 64 LVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNL 123
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
+ +I FC+ +L AF ++++ G PN T+S LI+ LC + R+SEA +L
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
M+ G P LV CL G+ ++A L D+M+ G P+ VTY ++
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC--------QPNAVTYGPVL 235
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
C G+ A+ +LR M E ++ D V Y+I+I G CK G L AF L EM E GI
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGI 294
Query: 448 RGVDLAVFSSLMKGLSDE----------------------VNYNSVINAYCAEGEVSKAL 485
++ ++ L+ G + V ++ +I+++ EG++ +A
Sbjct: 295 T-TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF-TYDTLIE 544
LH EM H G ++ Y L DGF K+ A + + M C P T++ LI
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD--PNIRTFNILIN 411
Query: 545 N-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVD 603
C N +EL + +RG+ V +TV YN LI C ++
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGV------VADTV----------TYNTLIQGFCELGKLN 455
Query: 604 KAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
A ++ EMV ++ + L+ L G + + + + +S
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 151/291 (51%), Gaps = 8/291 (2%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSV 95
V G L + EM +G+ P + L+ C + D A +++ MV+ G P++
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
T+N+L++ YC+ R+D+ + + R M+ V + V++NT+I G C ++ A+EL QE
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN 212
M S+ + P+ VTY L+ + N +A+ +++++++ ++ + Y +IH +C +
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGE-SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 213 -VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
VD A+ +F + G +P + TYN +I C + + +A +FR M + G PD N
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
LI G+ K+ ++ E+ G +A T +ID L RL ++F
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKSF 632
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 226/470 (48%), Gaps = 29/470 (6%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAM---GILRGMAVEPNVVSFNTVIDGL 137
K+L +++ G LP++ TYN+ + C+ +D A+ G L +P+V+++N +I GL
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
C + +EAE L +M ++GL PDS TYNTLI K + + + D + +P
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 198 WTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
+ TY SLI LC ++A +F E + G +P+++ YN LI + + +A +
Sbjct: 357 F-TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
M ++GL P+ N L+ CK G + A + M+ +G P+ T++ LI Q
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 317 RLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEF 376
++ A ++ ML G+ P Y Y +L+ C +F M+ KG
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG--------C 527
Query: 377 SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
+P+L T+N L+ C +++EALG+L M S++PD V++ +I GFCK G+L A+
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGS 496
L +M+EA K S YN +I+A+ + V+ A L EM
Sbjct: 588 LFRKMEEA--------------YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 497 LRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENC 546
Y ++ DGF K + LL M + +P+ T + NC
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN--GFIPSLTTLGRVINC 681
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 171/648 (26%), Positives = 287/648 (44%), Gaps = 62/648 (9%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTV 133
D A+KV M + G P V ++ + + ++C+ R A+ +L M+ E NVV++ TV
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ G + E EL +M + G++ T+N L+ + K + V L D++ ++
Sbjct: 188 VGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD-VKECEKLLDKVIKRG 246
Query: 194 IPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ TY I LC +D A ++ +I G +P ++TYN LI+ C + Q+A
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
M + GL PD+ NTLI +CK G ++ A + + V G +P+ TY LID L
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C + + A LF E LG G+ P Y L+ G +A L +EM KG +P+
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE- 425
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
+ T+N L+ G C +G V +A G+++ M PD ++NI+I G+ ++
Sbjct: 426 -------VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAY----------------- 475
A E++ M + G D+ ++SL+ GL + V+ Y
Sbjct: 479 NALEILDVMLDNG--VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 476 -----CAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM--FY 528
C ++ +AL L +EM++ +V + L DGF K GA +M Y
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 529 DLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAV 588
+ +S PT Y+ +I F + A + ++ PDG
Sbjct: 597 KVSSSTPT--YNIIIH---------------AFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 589 YNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNE----VRRVI 644
Y ++ C+ NV+ Y +EM+ GF + ++ +I L R E + R++
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 645 QNVLRSCNINGF-ELHKALSETGVIVREDKVKDVLLNVLA-EIAMDGL 690
Q L +N ++ K +V ED +K + A E+ DGL
Sbjct: 700 QKGLVPEAVNTICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGL 747
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 210/470 (44%), Gaps = 62/470 (13%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA---MGILRGMAVEPNV 127
C + + D A +++ ++ G P V TYN L++ C++ + EA +G + +EP+
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 128 VSFNT-----------------------------------VIDGLCAKRRIKEAEELLQE 152
++NT +IDGLC + A L E
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN 212
KG+ P+ + YNTLI +S N +++ A L ++M ++ + T+ L++ LC
Sbjct: 382 ALGKGIKPNVILYNTLIKGLS-NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 213 -VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
V A + MI+ G+ P + T+N LIH Y + ++++A+ I M D G+ PD N
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
+L+ CK + E E MVE+G PN T++ L++ LC R+L EA L EM
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
++P + L+ +C G+ A+ L +M + + S S TYN +I+
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-------EEAYKVSSSTPTYNIIIHAFT 613
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
V A + + M + L PD +Y +++ GFCK G + ++ ++EM E G I +
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL- 672
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASV 501
VIN C E V +A + M G + +V
Sbjct: 673 --------------TTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/536 (25%), Positives = 230/536 (42%), Gaps = 51/536 (9%)
Query: 102 LHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL 158
+ Y R +V EA+ + M EP V S+N ++ L +A ++ M +G+
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 159 APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVD-KAY 217
PD ++ + + K T+ A+ L + M Q + Y +++ N + Y
Sbjct: 143 TPDVYSFTIRMKSFCK-TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFF 277
++F +M+ASG L T+N+L+ C + V++ + + RG+ P+ N I
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 278 CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
C+ GEL+ A M ++E+G P+ TY+ LI LC + EA +M+ GL P
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
Y Y L+ YC G A + + + GF+PD +F TY +LI G C G
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD---QF-----TYRSLIDGLCHEGETN 373
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
AL + + P+ + YN +I G G + +A +L EM E
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE-------------- 419
Query: 458 LMKGLSDEVN-YNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKART 516
KGL EV +N ++N C G VS A L M G + +L G+ + +
Sbjct: 420 --KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 517 RGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLK-------- 567
A E +L + D +TY++L+ C ++F+ V+E K +G
Sbjct: 478 ENALE-ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 568 -----------NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
+EA +L + + PD + LI C+ ++D AY ++ +M
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 164/305 (53%), Gaps = 10/305 (3%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARES---LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVA 96
G +L+ +EM+ KGL P ++ L++ LC +D A ++ M++ G+ P +
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD-ADGLVKVMISKGYFPDIF 462
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
T+N+L+H Y +++ A+ IL M V+P+V ++N++++GLC + ++ E + M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-N 212
KG AP+ T+N L+ ++ + L A+ L ++MK + + T+ +LI C +
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYRKL-DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 213 VDKAYKVFTEMI-ASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
+D AY +F +M A S TYN +IHA+ + V A +F+ M DR L PD
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
++ FCK G + ++ EM+E G +P+ T ++I+CLC + R+ EA + M+
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 332 GLSPR 336
GL P
Sbjct: 702 GLVPE 706
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 221/525 (42%), Gaps = 47/525 (8%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK--NTNLVIRAIALY 186
++ +VI+ L + + EE+L +M + + + AM V A+ ++
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 99
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
++M +Y +++ +L D+A+KV+ M G P + ++ + ++C
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 159
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
R A+ + M +G + V T++ F + + +E+ +M+ G+ T+
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+KL+ LC + + E L +++ G+ P + Y + C GE A + +I
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
+G PD ++TYN LIYG C + +EA L M L PD +YN +I+G+
Sbjct: 280 QGPKPD--------VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 426 CKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKAL 485
CK G MV++ E R V AVF+ + D+ Y S+I+ C EGE ++AL
Sbjct: 332 CKGG--------MVQLAE----RIVGDAVFNGF---VPDQFTYRSLIDGLCHEGETNRAL 376
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYD-LCTSLPTFTY----- 539
L +E G +LY L G + A + M L + TF
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 540 ---------DTLIE-NCSNNEFKSVVE---LAKGFGMRGLKNEAASVLNTVLQWNYKPDG 586
D L++ S F + L G+ + A +L+ +L PD
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Query: 587 AVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKAL 631
YN L+ C+ + Y MV G A ++F+ L+++L
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 41/241 (17%)
Query: 73 QLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVS 129
QL+ +NA ++L M+++G P V TYN LL+ C+ + ++ M + M PN+ +
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNT------------- 176
FN +++ LC R++ EA LL+EM +K + PD+VT+ TLI KN
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Query: 177 ------------NLVIRAIA----------LYDQMKQQRIPVPWTTYTSLIHLLC-TYNV 213
N++I A L+ +M + + TY ++ C T NV
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV--ICN 271
+ YK EM+ +GF PSL T +I+ C DRV +A GI M +GL P+AV IC+
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICD 713
Query: 272 T 272
Sbjct: 714 V 714
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 154/388 (39%), Gaps = 53/388 (13%)
Query: 317 RLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEF 376
++ EA ++F M P ++Y ++ G F +A + M +G PD V F
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD-VYSF 149
Query: 377 SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
+ + ++ C R AL +L M+ + V+Y V+ GF + + +E
Sbjct: 150 TIRMKSF-------CKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGS 496
L +M +G V L + + +N ++ C +G+V + L D++ G
Sbjct: 203 LFGKMLASG----VSLCLST-----------FNKLLRVLCKKGDVKECEKLLDKVIKRGV 247
Query: 497 LRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP---TFTYDTLIEN-CSNNEFK 552
L Y + G ++ GA +RM L P TY+ LI C N++F+
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGA----VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 553 SVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
EA L ++ +PD YN LI +C+ V A + +
Sbjct: 304 ----------------EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 613 VHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL----RSCNINGFELHKALSETGVI 668
V GF F+ +LI L H G N + L + I L K LS G+I
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 669 VREDKVKDVL--LNVLAEIAMDGLLLNG 694
+ ++ + + ++ E+ +L+NG
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNG 435
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/590 (26%), Positives = 272/590 (46%), Gaps = 58/590 (9%)
Query: 56 KGLDPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAM 115
K D ++L L C ++ D +++ +++ + YN LL++ R VDE
Sbjct: 151 KSCDSVGDALYVLDLCRKMNKDERFELKYKLI-------IGCYNTLLNSLARFGLVDEMK 203
Query: 116 GILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM 172
+ M V PN+ ++N +++G C ++EA + + ++ GL PD TY +LI
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 173 SKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT-YNVDKAYKVFTEMIASGFEPS 231
+ +L A ++++M + YT LIH LC +D+A +F +M P+
Sbjct: 264 CQRKDL-DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 232 LVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRA 291
+ TY LI + C +R +A+ + + M + G+ P+ LI C + EKA E+
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 292 EMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVG 351
+M+E+G++PN TY+ LI+ C + + +A D+ M LSP Y L+ YC
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KS 441
Query: 352 EFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSL 411
KA + ++M+ + LPD +VTYN+LI G C G + A +L M + L
Sbjct: 442 NVHKAMGVLNKMLERKVLPD--------VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 412 SPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSV 471
PD +Y +I CK + +A +L +++ +GV+ V V Y ++
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ----KGVNPNV-----------VMYTAL 538
Query: 472 INAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGA---KESLLRMFY 528
I+ YC G+V +A ++ ++M L S+ + L G + + A +E ++++
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 529 DLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAV 588
PT + DT++ + L K G + A S +L KPD
Sbjct: 599 Q-----PTVSTDTIL----------IHRLLKD----GDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 589 YNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHN 638
Y I +CR + A +M +M G + +F+ +LIK +G+ N
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 278/593 (46%), Gaps = 46/593 (7%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM--- 121
LI LC + +++ A ++ EM +G P++ TY VL+ + C + ++A +L M
Sbjct: 329 LIKSLCGSERKSE-ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
+ PNV+++N +I+G C + I++A ++++ M S+ L+P++ TYN LI K+ V +
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN--VHK 445
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIH 240
A+ + ++M ++++ TY SLI C + N D AY++ + M G P TY +I
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
+ C RV++A +F + +G+ P+ V+ LI +CK G++++A M +M+ + LP
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
N+ T++ LI LC +L EA L +M+ GL P L+ G+F A+
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
+M+ G PD TY I C GR+ +A ++ M E +SPD +Y+
Sbjct: 626 QQMLSSGTKPD--------AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINA---YCA 477
+I G+ LG+ AF+++ M + G F SL+K L E+ Y + CA
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGC--EPSQHTFLSLIKHLL-EMKYGKQKGSEPELCA 734
Query: 478 EG---EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSL 534
E + L ++M H + Y L G + R A++ M + S
Sbjct: 735 MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 535 PTFTYDTLIENC----SNNEFKSVVE----------------LAKGFGMRGLKNEAASVL 574
++ L+ C +NE VV+ L G +G K SV
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVF 854
Query: 575 NTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG--FASHMFSVL 625
+LQ Y D + +I ++ V+ Y ++ M G F+S +S+L
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 209/457 (45%), Gaps = 49/457 (10%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTV 133
D+AY++LS M + G +P TY ++ + C+ KRV+EA + L V PNVV + +
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
IDG C ++ EA +L++M SK P+S+T+N LI + + L A L ++M +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK-EATLLEEKMVKIG 597
Query: 194 IPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ +T T LIH LL + D AY F +M++SG +P TY I YC R+ DA
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC- 311
+ M + G++PD ++LI + G+ AF++ M + G P+ T+ LI
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 312 --------------LCPQRRLSE---AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
LC + E +L +M+ ++P +Y L+ C VG
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
A + D M SPS + +NAL+ C L + EA ++ M + P
Sbjct: 778 VAEKVFDHMQRN-------EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 415 DVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG--LSDEVNYNSVI 472
S ++I G K GE E G +VF +L++ DE+ + +I
Sbjct: 831 LESCKVLICGLYKKGE-----------KERGT------SVFQNLLQCGYYEDELAWKIII 873
Query: 473 NAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDG 509
+ +G V L + ME +G +S Y +L +G
Sbjct: 874 DGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 200/441 (45%), Gaps = 43/441 (9%)
Query: 201 YTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
Y +L++ L + VD+ +V+ EM+ P++ TYN++++ YC V++A +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
+ GL PD +LI +C+ +L+ AF++ EM +G N Y+ LI LC RR+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
EA DLF +M P Y L+ + C S+A +L EM G P+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI--------KPN 357
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
+ TY LI C + E+A +L M E L P+ ++YN +I+G+CK G + A ++ V
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV-V 416
Query: 440 EMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRA 499
E+ E+ + + YN +I YC + V KA+ + ++M L
Sbjct: 417 ELMESRKLS--------------PNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPD 461
Query: 500 SVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELA 558
V Y L DG + A LL + D +TY ++I++ C + +
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYR-LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE------ 514
Query: 559 KGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFA 618
EA + +++ Q P+ +Y LI +C+ VD+A+ M +M+
Sbjct: 515 ----------EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 619 SHMFSVLALIKALFHVGRHNE 639
+ + ALI L G+ E
Sbjct: 565 PNSLTFNALIHGLCADGKLKE 585
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 225/490 (45%), Gaps = 76/490 (15%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAM---------GILRGM 121
CD + + ++ GF P V T+N LLH C + R+ EA+ G L +
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 122 A---------VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM 172
A + P V++FNT+I+GLC + R+ EA L+ +M KGL D VTY T++ M
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 173 SKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT--YNVDKAYKVFTEMIASGFEP 230
K + A+ L +M++ I Y+++I LC ++ D Y +F+EM+ G P
Sbjct: 272 CKMGD-TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY-LFSEMLEKGIAP 329
Query: 231 SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMR 290
++ TYN +I +C R DA + R M +R + PD + N LI+ K G+L +A ++
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 291 AEMVERGILPNADTYSKL-------------------------------IDCLCPQRRLS 319
EM+ R I P+ TY+ + ID C +R+
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
E L RE+ GL Y L+ +C V + A L EMI G PD
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD-------- 501
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
+T N L+YG C ++EEAL + + + D V+YNI+I G CK ++ +A++L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 440 EMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRA 499
+ I GV+ D YN +I+ +C + +S A +L +M+ +G
Sbjct: 562 SL----PIHGVE-----------PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 500 SVLYIMLFDG 509
+ Y L G
Sbjct: 607 NSTYNTLIRG 616
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 143/567 (25%), Positives = 254/567 (44%), Gaps = 74/567 (13%)
Query: 94 SVATYNVLLHAYCRDKRVD---EAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELL 150
++ ++N+L+ +C ++ G L + +P+VV+FNT++ GLC + RI EA L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT 210
M G + A+AL+DQM + + T+ +LI+ LC
Sbjct: 200 GYMVETGF---------------------LEAVALFDQMVEIGLTPVVITFNTLINGLCL 238
Query: 211 YN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
V +A + +M+ G +VTY +++ C + A+ + M + + PD VI
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
+ +I CK G A + +EM+E+GI PN TY+ +ID C R S+A L R+M+
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYG 389
++P + L+ A G+ +A L DEM+H+ PD VTYN++IYG
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD--------TVTYNSMIYG 410
Query: 390 NCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
C R ++A + M ++ SPD V++N +I +C+ + + +L+ E+ G +
Sbjct: 411 FCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV-- 464
Query: 450 VDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDG 509
++ YN++I+ +C ++ A L EM HG ++ +L G
Sbjct: 465 -------------ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 510 FDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVEL----------- 557
F + + A E L + L T Y+ +I C ++ +L
Sbjct: 512 FCENEKLEEALE-LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 558 --------AKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMY 609
GF + ++A + + + ++PD + YN LI + +DK+ +
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 610 MEMVHYGFASHMFSVLALIKALFHVGR 636
EM GF+ F++ ++ L GR
Sbjct: 631 SEMRSNGFSGDAFTI-KMVADLITDGR 656
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 198/411 (48%), Gaps = 19/411 (4%)
Query: 41 GGLLKTTTTVSEMNRKGL--DPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATY 98
G +L+ V++M KGL D I C +A +LS+M + P V Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 99 NVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
+ ++ C+D +A + M + PNV ++N +IDG C+ R +A+ LL++M
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VD 214
+ + PD +T+N LI+A K L A L D+M + I TY S+I+ C +N D
Sbjct: 360 REINPDVLTFNALISASVKEGKL-FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
A +F +++AS P +VT+N +I YC RV + M + R + RGL + NTLI
Sbjct: 419 DAKHMF-DLMAS---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
FC+ L A ++ EM+ G+ P+ T + L+ C +L EA +LF + +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
AY ++ C + +A+ L + G PD + TYN +I G C
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD--------VQTYNVMISGFCGKS 586
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+ +A + M + PD+ +YN +I G K GE+ K+ EL+ EM G
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 176/371 (47%), Gaps = 39/371 (10%)
Query: 50 VSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYC 106
+S+M + P ++I LC D +D Y + SEM+ G P+V TYN ++ +C
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY-LFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 107 RDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSV 163
R +A +LR M + P+V++FN +I + ++ EAE+L EM + + PD+V
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 164 TYNTLITAMSKNT--------------------NLVI----------RAIALYDQMKQQR 193
TYN++I K+ N +I + L ++ ++
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ TTY +LIH C N++ A +F EMI+ G P +T N L++ +C +++++A+
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+F + + D V N +I CK ++++A+++ + G+ P+ TY+ +I
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD- 371
C + +S+A LF +M G P Y L+ GE K+ L EM GF D
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 372 FVTEFSPSLVT 382
F + L+T
Sbjct: 643 FTIKMVADLIT 653
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 14/292 (4%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPS 94
V G L + EM + + P S+I+ C N + M + P
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC-----KHNRFDDAKHMFDLMASPD 431
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQ 151
V T+N ++ YCR KRVDE M +LR ++ + N ++NT+I G C + A++L Q
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT- 210
EM S G+ PD++T N L+ +N L A+ L++ ++ +I + Y +IH +C
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 211 YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVIC 270
VD+A+ +F + G EP + TYN +I +C + + DA +F M D G PD
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
NTLI K GE++K+ E+ +EM G +A T + D L RL ++F
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKSF 661
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 178/440 (40%), Gaps = 53/440 (12%)
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
+ DA+ F M AV CN +I F + + A + +M R I N +++
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
LI C C +LS + F ++ G P + L+ CL S+A L M+ G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 368 FLP-----DFVTE--FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
FL D + E +P ++T+N LI G CL GRV EA ++ M L D V+Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGE 480
+++G CK+G+ A L+ +M+E I+ D V Y+++I+ C +G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETH-IK--------------PDVVIYSAIIDRLCKDGH 311
Query: 481 VSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMF-YDLCTSLPTFTY 539
S A L EM G Y + DGF R A+ L M ++ + TF
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 540 ------------------DTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWN 581
D ++ C + + + GF ++A + + +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 582 YKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVR 641
PD +N +I +CR + VD+ + E+ G ++ + LI V N +
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 642 RVIQNVLR--------SCNI 653
+ Q ++ +CNI
Sbjct: 488 DLFQEMISHGVCPDTITCNI 507
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 246/539 (45%), Gaps = 61/539 (11%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D+A +L +M G +P+ Y L+H+ + RV+EA+ +L M P+ +FN V
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ-- 191
I GLC RI EA +++ M +G APD +TY L+ + K I D K
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK--------IGRVDAAKDLF 345
Query: 192 QRIPVP-WTTYTSLIHLLCTYN-VDKAYKVFTEMIAS-GFEPSLVTYNELIHAYCCRDRV 248
RIP P + +LIH T+ +D A V ++M+ S G P + TYN LI+ Y V
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
A+ + M ++G P+ L+ FCK G++++A+ + EM G+ PN ++ L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
I C + R+ EA ++FREM G P Y + +L+ C V E A L +MI +G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
+ + VTYN LI G ++EA ++ M D+++YN +I G C+
Sbjct: 526 VAN--------TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 429 GELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILH 488
GE+ KA L +M G ++ N +IN C G V +A+
Sbjct: 578 GEVDKARSLFEKMLRDGHA---------------PSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 489 DEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDL-CTSLP--TFTYDTLIEN 545
EM GS V + L +G + R E L MF L +P T T++TL+
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRI----EDGLTMFRKLQAEGIPPDTVTFNTLMS- 677
Query: 546 CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDK 604
L KG G +A +L+ ++ + P+ ++ L+ + +D+
Sbjct: 678 ----------WLCKG----GFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/427 (31%), Positives = 211/427 (49%), Gaps = 33/427 (7%)
Query: 50 VSEMNRKGLDPARESL--IHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
+ EM G P E+ + L C + + A K+++ M+ GF P TY L++ C+
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 108 DKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM-NSKGLAPDSVTYN 166
RVD A + + +P +V FNT+I G R+ +A+ +L +M S G+ PD TYN
Sbjct: 335 IGRVDAAKDLFYRIP-KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIA 225
+LI K LV A+ + M+ + +YT L+ C +D+AY V EM A
Sbjct: 394 SLIYGYWKE-GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
G +P+ V +N LI A+C R+ +A+ IFR MP +G PD N+LI+ C+ E++
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
A + +M+ G++ N TY+ LI+ + + EA L EM+ G E Y +L+
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVT------------------EF---------SP 378
C GE KA L ++M+ G P ++ EF +P
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
+VT+N+LI G C GR+E+ L + R + + PD V++N ++S CK G + A L+
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 439 VEMDEAG 445
E E G
Sbjct: 693 DEGIEDG 699
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 246/519 (47%), Gaps = 39/519 (7%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVID 135
A V +M++ P++ T+ V++ A+C +D A+ +LR M PN V + T+I
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
L R+ EA +LL+EM G PD+ T+N +I + K + + A + ++M +
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK-FDRINEAAKMVNRMLIRGFA 319
Query: 196 VPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
TY L++ LC VD A +F + +P +V +N LIH + R+ DA +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 255 FRGM-PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
M G+ PD N+LI + K G + A E+ +M +G PN +Y+ L+D C
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
++ EA+++ EM GL P + L+ A+C +A + EM KG PD
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD-- 493
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
+ T+N+LI G C + ++ AL +LR M + + V+YN +I+ F + GE+ +
Sbjct: 494 ------VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
A +L+ EM G S L DE+ YNS+I C GEV KA L ++M
Sbjct: 548 ARKLVNEMVFQG----------SPL-----DEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF-TYDTLIEN-CSNNEF 551
G +++ +L +G + A E M L S P T+++LI C
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV--LRGSTPDIVTFNSLINGLCRAGRI 650
Query: 552 KSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYN 590
+ + + + G+ + + NT++ W K G VY+
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVT-FNTLMSWLCK-GGFVYD 687
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 148/545 (27%), Positives = 240/545 (44%), Gaps = 51/545 (9%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
P+ +YNV+L A + M + P + +F V+ CA I A L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
L++M G P+SV Y TLI ++SK N V A+ L ++M T+ +I LC
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSK-CNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 210 TYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
++ +++A K+ M+ GF P +TY L++ C RV A +F +P P+ V
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIV 354
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVER-GILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
I NTLI F +G L+ A + ++MV GI+P+ TY+ LI + + A ++ +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
M G P Y+Y LV +C +G+ +A+++ +EM G P+ V +N LI
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG--------LKPNTVGFNCLI 466
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
C R+ EA+ I R M PD ++N +ISG C++ E+ A L+ +M G +
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
++ V YN++INA+ GE+ +A L +EM GS + Y L
Sbjct: 527 ---------------ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 508 DGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGL 566
G + A+ +M D + + + LI C + + VE K +RG
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG- 629
Query: 567 KNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLA 626
PD +N LI CR ++ M+ ++ G +
Sbjct: 630 ---------------STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 627 LIKAL 631
L+ L
Sbjct: 675 LMSWL 679
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 244/555 (43%), Gaps = 67/555 (12%)
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
+ +I L A K + LL +M +G+ + +++ K + L +M
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDK-AGFPGQTTRLMLEM 172
Query: 190 KQQRIPVP-WTTYTSLIHLLCTYNVDK-AYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
+ P + +Y ++ +L + N K A VF +M++ P+L T+ ++ A+C +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
+ A+ + R M G P++VI TLI K + +A ++ EM G +P+A+T++
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL-------- 359
+I LC R++EA + ML G +P + Y L+ C +G A L
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 360 ---RDEMIH-----------KGFLPDFVTEFS--PSLVTYNALIYGNCLLGRVEEALGIL 403
+ +IH K L D VT + P + TYN+LIYG G V AL +L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 404 RGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLM---- 459
M P+ SY I++ GFCKLG++ +A+ ++ EM A G++ + F+ L+
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM-SADGLKPNTVG-FNCLISAFC 470
Query: 460 -----------------KGLSDEV-NYNSVINAYCAEGEVSKALILHDEMEHHGSLRASV 501
KG +V +NS+I+ C E+ AL L +M G + +V
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 502 LYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGF 561
Y L + F ++ + A++ + M + + L TY++LI KG
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQ-GSPLDEITYNSLI---------------KGL 574
Query: 562 GMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHM 621
G ++A S+ +L+ + P N LI CR V++A EMV G +
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 634
Query: 622 FSVLALIKALFHVGR 636
+ +LI L GR
Sbjct: 635 VTFNSLINGLCRAGR 649
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 153/308 (49%), Gaps = 42/308 (13%)
Query: 52 EMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
+M KG P S L+ C + D AY VL+EM G P+ +N L+ A+C++
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 110 RVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
R+ EA+ I R M +P+V +FN++I GLC IK A LL++M S+G+ ++VTYN
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIA 225
TLI A + + A L ++M Q P+ TY SLI LC VDKA +F +M+
Sbjct: 534 TLINAFLRRGE-IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 226 SGFEPS-----------------------------------LVTYNELIHAYCCRDRVQD 250
G PS +VT+N LI+ C R++D
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
+ +FR + G+ PD V NTL+++ CK G + A + E +E G +PN T+S L+
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Query: 311 CLCPQRRL 318
+ PQ L
Sbjct: 713 SIIPQETL 720
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 163/396 (41%), Gaps = 49/396 (12%)
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P +Y+ +++ L A ++F +ML + P + + ++ A+C V E A L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+M G +P+ V Y LI+ RV EAL +L M M PD ++N
Sbjct: 240 LRDMTKHGCVPNSVI--------YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAE 478
VI G CK + +A +++ M L++G + D++ Y ++N C
Sbjct: 292 DVILGLCKFDRINEAAKMVNRM----------------LIRGFAPDDITYGYLMNGLCKI 335
Query: 479 GEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFT 538
G V A ++ + V++ L GF R AK L D+ TS
Sbjct: 336 GRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL----SDMVTS----- 382
Query: 539 YDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCR 598
Y + + C+ N L G+ GL A VL+ + KP+ Y L+ C+
Sbjct: 383 YGIVPDVCTYNS------LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 599 RRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS-CNINGFE 657
+D+AYN+ EM G + LI A R E + + + R C + +
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 658 LHKALSETGVIVREDKVKDVLLNVLAEIAMDGLLLN 693
+ +S + D++K L +L ++ +G++ N
Sbjct: 497 FNSLISG---LCEVDEIKHALW-LLRDMISEGVVAN 528
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 225/490 (45%), Gaps = 76/490 (15%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAM---------GILRGM 121
CD + + ++ GF P V T+N LLH C + R+ EA+ G L +
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 122 A---------VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM 172
A + P V++FNT+I+GLC + R+ EA L+ +M KGL D VTY T++ M
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 173 SKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT--YNVDKAYKVFTEMIASGFEP 230
K + A+ L +M++ I Y+++I LC ++ D Y +F+EM+ G P
Sbjct: 272 CKMGD-TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY-LFSEMLEKGIAP 329
Query: 231 SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMR 290
++ TYN +I +C R DA + R M +R + PD + N LI+ K G+L +A ++
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 291 AEMVERGILPNADTYSKL-------------------------------IDCLCPQRRLS 319
EM+ R I P+ TY+ + ID C +R+
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
E L RE+ GL Y L+ +C V + A L EMI G PD
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD-------- 501
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
+T N L+YG C ++EEAL + + + D V+YNI+I G CK ++ +A++L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 440 EMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRA 499
+ I GV+ D YN +I+ +C + +S A +L +M+ +G
Sbjct: 562 SLP----IHGVE-----------PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 500 SVLYIMLFDG 509
+ Y L G
Sbjct: 607 NSTYNTLIRG 616
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 153/617 (24%), Positives = 269/617 (43%), Gaps = 71/617 (11%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEP---NVVSFNTV 133
D+A MV S + N ++ + R R D A+ + R M + N+ SFN +
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL--------------V 179
I C ++ + ++ G PD VT+NTL+ + +
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 180 IRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNEL 238
+ A+AL+DQM + + T+ +LI+ LC V +A + +M+ G +VTY +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 239 IHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
++ C + A+ + M + + PD VI + +I CK G A + +EM+E+GI
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 299 LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
PN TY+ +ID C R S+A L R+M+ ++P + L+ A G+ +A
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
L DEM+H+ PD VTYN++IYG C R ++A + M ++ SPD V++
Sbjct: 388 LCDEMLHRCIFPD--------TVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTF 435
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAE 478
N +I +C+ + + +L+ E+ G + ++ YN++I+ +C
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLV---------------ANTTTYNTLIHGFCEV 480
Query: 479 GEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFT 538
++ A L EM HG ++ +L GF + + A E L + L T
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVA 539
Query: 539 YDTLIEN-CSNNEFKSVVEL-------------------AKGFGMRGLKNEAASVLNTVL 578
Y+ +I C ++ +L GF + ++A + + +
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 579 QWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHN 638
++PD + YN LI + +DK+ + EM GF+ F++ + + V
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD-- 657
Query: 639 EVRRVIQNVLRSCNING 655
+I+N LR ING
Sbjct: 658 --EEIIENYLRP-KING 671
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 198/411 (48%), Gaps = 19/411 (4%)
Query: 41 GGLLKTTTTVSEMNRKGL--DPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATY 98
G +L+ V++M KGL D I C +A +LS+M + P V Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 99 NVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
+ ++ C+D +A + M + PNV ++N +IDG C+ R +A+ LL++M
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VD 214
+ + PD +T+N LI+A K L A L D+M + I TY S+I+ C +N D
Sbjct: 360 REINPDVLTFNALISASVKEGKL-FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
A +F +++AS P +VT+N +I YC RV + M + R + RGL + NTLI
Sbjct: 419 DAKHMF-DLMAS---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
FC+ L A ++ EM+ G+ P+ T + L+ C +L EA +LF + +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
AY ++ C + +A+ L + G PD + TYN +I G C
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD--------VQTYNVMISGFCGKS 586
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+ +A + M + PD+ +YN +I G K GE+ K+ EL+ EM G
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 164/345 (47%), Gaps = 35/345 (10%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM-- 121
++I LC D +D Y + SEM+ G P+V TYN ++ +C R +A +LR M
Sbjct: 301 AIIDRLCKDGHHSDAQY-LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 122 -AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL-- 178
+ P+V++FN +I + ++ EAE+L EM + + PD+VTYN++I K+
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 179 ----------------------------VIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT 210
V + L ++ ++ + TTY +LIH C
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 211 Y-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
N++ A +F EMI+ G P +T N L++ +C +++++A+ +F + + D V
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
N +I CK ++++A+++ + G+ P+ TY+ +I C + +S+A LF +M
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
G P Y L+ GE K+ L EM GF D T
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 140/283 (49%), Gaps = 13/283 (4%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPS 94
V G L + EM + + P S+I+ C N + M + P
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC-----KHNRFDDAKHMFDLMASPD 431
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQ 151
V T+N ++ YCR KRVDE M +LR ++ + N ++NT+I G C + A++L Q
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT- 210
EM S G+ PD++T N L+ +N L A+ L++ ++ +I + Y +IH +C
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 211 YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVIC 270
VD+A+ +F + G EP + TYN +I +C + + DA +F M D G PD
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
NTLI K GE++K+ E+ +EM G +A T + +C
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 130/308 (42%), Gaps = 59/308 (19%)
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
++ ++N LI C ++ +L + ++ PD V++N ++ G C + +A L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 439 VEMDEAGGIRGVDLAVFSSLMK-GLSDEV-NYNSVINAYCAEGEVSKALILHDEMEHHGS 496
M E G + V A+F +++ GL+ V +N++IN C EG V +A L ++M G
Sbjct: 200 GYMVETGFLEAV--ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG- 256
Query: 497 LRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVE 556
+ TY T++
Sbjct: 257 -----------------------------------LHIDVVTYGTIV------------- 268
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
G G A ++L+ + + + KPD +Y+ +I C+ + A ++ EM+ G
Sbjct: 269 --NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 617 FASHMFSVLALIKALFHVGRHNEVRRVIQNVL-RSCNINGFELHKALSET---GVIVRED 672
A ++F+ +I GR ++ +R++++++ R N + + +S + G + +
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 673 KVKDVLLN 680
K+ D +L+
Sbjct: 387 KLCDEMLH 394
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 214/425 (50%), Gaps = 37/425 (8%)
Query: 45 KTTTTVSE--MNRKGLDPA---RESLIHLLC--------------CDQLQNDNAYKVLSE 85
KT TTV + + LD A RE ++ C C + + ++A + E
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 86 MVNS-GFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKR 141
M N GF P T+N L++ C+ V A+ I+ M E P+V ++N+VI GLC
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
+KEA E+L +M ++ +P++VTYNTLI+ + K N V A L + + I T+
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKE-NQVEEATELARVLTSKGILPDVCTF 403
Query: 202 TSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
SLI LC T N A ++F EM + G EP TYN LI + C + ++ +A+ + + M
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
G + NTLI FCK + +A E+ EM G+ N+ TY+ LID LC RR+ +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A L +M+ G P +Y Y +L+ +C G+ KA + M G PD +
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD--------I 575
Query: 381 VTYNALIYGNCLLGRVEEALGILRG--MAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
VTY LI G C GRVE A +LR M ++L+P +YN VI G + + +A L
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLF 633
Query: 439 VEMDE 443
EM E
Sbjct: 634 REMLE 638
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 241/510 (47%), Gaps = 47/510 (9%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----PNVVSFNT 132
D A ++ +MV G S + NV++H +C++ RV++A+ ++ M+ + P+ +FNT
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+++GLC +K A E++ M +G PD TYN++I+ + K V A+ + DQM +
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK-LGEVKEAVEVLDQMITR 359
Query: 193 RIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
TY +LI LC N V++A ++ + + G P + T+N LI C + A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
M +F M +G PD N LI C G+L++A M +M G + TY+ LID
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
C + EA ++F EM G+S Y L+ C A L D+MI +G PD
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
TYN+L+ C G +++A I++ M PD V+Y +ISG CK G +
Sbjct: 540 --------KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
A +L+ + ++G++L + YN VI + + ++A+ L EM
Sbjct: 592 EVASKLLRSIQ----MKGINLTPHA-----------YNPVIQGLFRKRKTTEAINLFREM 636
Query: 492 -EHHGSLRASVLYIMLFDGF-DKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNN 549
E + + +V Y ++F G + R A + L+ L+E
Sbjct: 637 LEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVE----------------LLEKGFVP 680
Query: 550 EFKSVVELAKGFGMRGLKNEAASVLNTVLQ 579
EF S+ LA+G ++ ++N V+Q
Sbjct: 681 EFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 710
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/580 (25%), Positives = 262/580 (45%), Gaps = 50/580 (8%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM----AVEPNVVSFNT 132
D+ K+L +M +S +T+ +L+ +Y + + DE + ++ M ++P+ +N
Sbjct: 100 DDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNR 159
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+++ L +K E +M+ G+ PD T+N LI A+ + L + L D
Sbjct: 160 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 193 RIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+P T T + + ++D A ++ +M+ G S V+ N ++H +C RV+DA+
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 253 GIFRGMPDR-GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ M ++ G PD NTL+ CK G ++ A E+ M++ G P+ TY+ +I
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
LC + EA ++ +M+ SP Y L+ C + +A L + KG LPD
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
+ T+N+LI G CL A+ + M PD+ +YN++I C G+L
Sbjct: 400 --------VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
+A ++ +M+ +G R V + YN++I+ +C + +A + DEM
Sbjct: 452 DEALNMLKQMELSGCARSV---------------ITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNE 550
E HG R SV Y L DG K R A + + +M + +TY++L+ + C +
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME-GQKPDKYTYNSLLTHFCRGGD 555
Query: 551 FKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMY- 609
K +AA ++ + +PD Y LI C+ V+ A +
Sbjct: 556 IK----------------KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 610 -MEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL 648
++M H ++ +I+ LF + E + + +L
Sbjct: 600 SIQMKGINLTPHAYN--PVIQGLFRKRKTTEAINLFREML 637
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 252/540 (46%), Gaps = 58/540 (10%)
Query: 145 EAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT-YTS 203
+ +++L++M S + T+ LI + ++ L +++ D M + P T Y
Sbjct: 101 DMKKILEDMKSSRCEMGTSTFLILIESYAQ-FELQDEILSVVDWMIDEFGLKPDTHFYNR 159
Query: 204 LIHLLCTYNVDKAYKV-FTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG 262
+++LL N K ++ +M G +P + T+N LI A C +++ A+ + MP G
Sbjct: 160 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 219
Query: 263 LTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
L PD T++ + + G+L+ A +R +MVE G + + + ++ C + R+ +A
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 323 DLFREMLG-GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
+ +EM G P +Y + LV C G A + D M+ +G+ PD +
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD--------VY 331
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
TYN++I G C LG V+EA+ +L M SP+ V+YN +IS CK ++ +A EL +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 442 DEAGGIRGVDLAVFSSLMKGL----------------------SDEVNYNSVINAYCAEG 479
G + D+ F+SL++GL DE YN +I++ C++G
Sbjct: 392 TSKGILP--DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTY 539
++ +AL + +ME G R+ + Y L DGF K +TR A+E M S + TY
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH-GVSRNSVTY 508
Query: 540 DTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCR 598
+TLI+ C + + +AA +++ ++ KPD YN L+ CR
Sbjct: 509 NTLIDGLCKSRRVE----------------DAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 599 RRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFEL 658
++ KA ++ M G + + LI L GR V +LRS + G L
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR----VEVASKLLRSIQMKGINL 608
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 263/590 (44%), Gaps = 61/590 (10%)
Query: 59 DPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI- 117
D RE+L + D L+ D+A + +MV S PS+ ++ LL A + + D + +
Sbjct: 40 DDCRENLSRKVLQD-LKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLG 98
Query: 118 --LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN 175
++ + + N+ +++ I+ C + ++ A +L +M G P VT N+L+ +
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFC-H 157
Query: 176 TNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVT 234
N + A+AL DQM + T+T+L+H L +N +A + M+ G +P LVT
Sbjct: 158 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
Y +I+ C R A+ + M + D VI NT+I CKY ++ AF++ +M
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN-LVGAYCLVGEF 353
+GI P+ TY+ LI CLC R S+A L +ML ++P + +FN L+ A+ G+
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP-DLVFFNALIDAFVKEGKL 336
Query: 354 SKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP 413
+A L DEM+ P +V YN LI G C RVEE + + R M++ L
Sbjct: 337 VEAEKLYDEMVKS-------KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 414 DDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVIN 473
+ V+Y +I GF + + A + +M G V +M YN +++
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG--------VHPDIM-------TYNILLD 434
Query: 474 AYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS 533
C G V AL++ + M+ V Y + + K + +DL S
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG--------WDLFCS 486
Query: 534 LP-------TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDG 586
L TY T++ GF +GLK EA ++ + + P+
Sbjct: 487 LSLKGVKPNVVTYTTMMS---------------GFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 587 AVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
YN LI R + + + EM GFA S L+ + H GR
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA-STFGLVTNMLHDGR 580
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 32/277 (11%)
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
PS+V ++ L+ + + + + + M + +S + +Y+I I+ FC+ +L A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
+ +M + G + V NS++N +C +S+A+ L D+M G
Sbjct: 133 LGKMMKLGYGPSI---------------VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 498 RASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVEL 557
+V + L G + + A + RM C TY +I
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP-DLVTYGAVIN------------- 223
Query: 558 AKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGF 617
G RG + A ++LN + + + D +YN +I C+ +++D A++++ +M G
Sbjct: 224 --GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 618 ASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNIN 654
+F+ LI L + GR ++ R++ ++L NIN
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NIN 317
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 198/385 (51%), Gaps = 14/385 (3%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM--- 121
+I+ CC Q A +L +M+ G+ P T L++ +CR RV +A+ ++ M
Sbjct: 126 VINCFCC-CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
+P++V++N +ID LC +R+ +A + +E+ KG+ P+ VTY L+ + ++
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIH 240
A L D +K++ P TY++L+ V +A ++F EM+ +P +VTY+ LI+
Sbjct: 245 ARLLSDMIKKKITP-NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
C DR+ +A +F M +G D V NTLI FCK +E ++ EM +RG++
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
N TY+ LI + +A + F +M G+SP + Y L+G C GE KA +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
++M + E +VTY +I G C G+VEEA + ++ L PD V+Y
Sbjct: 424 EDMQKR--------EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 421 VISGFCKLGELGKAFELMVEMDEAG 445
++SG C G L + L +M + G
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 203/442 (45%), Gaps = 28/442 (6%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTV 133
++A + S+MV S PS+ +N LL A + K+ D + + + M V ++ +FN V
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I+ C ++ A +L +M G PD VT +L+ + N V A++L D+M +
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR-NRVSDAVSLVDKMVEIG 185
Query: 194 IPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
Y ++I LC T V+ A+ F E+ G P++VTY L++ C R DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M + +TP+ + + L+ F K G++ +A E+ EMV I P+ TYS LI+ L
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C R+ EA +F M+ G +Y L+ +C L EM +G + +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN- 364
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
VTYN LI G G V++A M +SPD +YNI++ G C GEL
Sbjct: 365 -------TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME 492
KA + +M + R +DL D V Y +VI C G+V +A L +
Sbjct: 418 KALVIFEDMQK----REMDL-----------DIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 493 HHGSLRASVLYIMLFDGFDKKA 514
G V Y + G K
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKG 484
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 229/531 (43%), Gaps = 78/531 (14%)
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFT----EMIASGFEPSLVTYNE 237
AI L+ M + R P+ + LL K Y V +M G L T+N
Sbjct: 69 AIDLFSDMVKSR---PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 238 LIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG 297
+I+ +CC +V A+ I M G PD V +L+ FC+ + A + +MVE G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 298 ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAF 357
P+ Y+ +ID LC +R+++AFD F+E+ G+ P Y LV C +S A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 358 HLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVS 417
L +MI K + +P+++TY+AL+ G+V EA + M MS+ PD V+
Sbjct: 246 RLLSDMIKK--------KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 418 YNIVISGFC---KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG-LSDEVNYNSVIN 473
Y+ +I+G C ++ E + F+LMV KG L+D V+YN++IN
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVS-------------------KGCLADVVSYNTLIN 338
Query: 474 AYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM-FYDLCT 532
+C V + L EM G + +V Y L GF + A+E +M F+ +
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI-- 396
Query: 533 SLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNF 591
S +TY+ L+ C N E + +A + + + D Y
Sbjct: 397 SPDIWTYNILLGGLCDNGELE----------------KALVIFEDMQKREMDLDIVTYTT 440
Query: 592 LIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSC 651
+I C+ V++A++++ + G + + ++ L G +EV
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE---------- 490
Query: 652 NINGFELHKALSETGVIVREDKVKDVLLNVLAEIAMDGLLLNGGKCSYAPA 702
L+ + + G++ + + D + + AE+ L C YAP+
Sbjct: 491 -----ALYTKMKQEGLMKNDCTLSDGDITLSAELIKKML-----SCGYAPS 531
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 5/130 (3%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
+G + K S+M+ G+ P + LL CD + + A + +M + T
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 98 YNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
Y ++ C+ +V+EA + ++++ P++V++ T++ GLC K + E E L +M
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 155 SKGLAPDSVT 164
+GL + T
Sbjct: 498 QEGLMKNDCT 507
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 195/371 (52%), Gaps = 13/371 (3%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A + +M SV Y++++ + C+D D+A+ + M ++ +VV+++++I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
GLC + + ++L+EM + + PD VT++ LI K L + A LY++M + I
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL-LEAKELYNEMITRGIA 347
Query: 196 VPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
TY SLI C N + +A ++F M++ G EP +VTY+ LI++YC RV D M +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
FR + +GL P+ + NTL+ FC+ G+L A E+ EMV RG+ P+ TY L+D LC
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
L++A ++F +M ++ Y ++ C + A+ L + KG PD
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD--- 524
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
+VTYN +I G C G + EA + R M E +PDD +YNI+I L +
Sbjct: 525 -----VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 435 FELMVEMDEAG 445
EL+ EM G
Sbjct: 580 VELIEEMKVCG 590
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/576 (26%), Positives = 239/576 (41%), Gaps = 100/576 (17%)
Query: 73 QLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV--------- 123
++ ++A + M+ S LP+ +N L A R K+ D +G +GM +
Sbjct: 48 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 124 -----------------------------EPNVVSFNT---------------------- 132
EP+ ++F+T
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 133 -------------VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLV 179
+I+GLC K R+ EA L+ M G PD VTY ++ + K+ N
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 180 IRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNEL 238
+ A+ L+ +M+++ I Y+ +I LC + D A +F EM G + +VTY+ L
Sbjct: 228 L-ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 239 IHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
I C + D + R M R + PD V + LI F K G+L +A E+ EM+ RGI
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 299 LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
P+ TY+ LID C + L EA +F M+ G P Y L+ +YC
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
L E+ KG +P+ +TYN L+ G C G++ A + + M + P V+Y
Sbjct: 407 LFREISSKGLIPN--------TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAE 478
I++ G C GEL KA E+ +M ++ G+ + YN +I+ C
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI---------------YNIIIHGMCNA 503
Query: 479 GEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFT 538
+V A L + G V Y ++ G KK A +M D CT FT
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP-DDFT 562
Query: 539 YDTLIE-NCSNNEFKSVVELAKGFGMRGLKNEAASV 573
Y+ LI + + S VEL + + G +++++
Sbjct: 563 YNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 598
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 175/360 (48%), Gaps = 21/360 (5%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR---GMAVEPNV 127
C D+A + +EM G V TY+ L+ C D + D+ +LR G + P+V
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V+F+ +ID + ++ EA+EL EM ++G+APD++TYN+LI K N + A ++D
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE-NCLHEANQMFD 374
Query: 188 QMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
M + TY+ LI+ C VD ++F E+ + G P+ +TYN L+ +C
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
++ A +F+ M RG+ P V L+ C GEL KA E+ +M + + Y+
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
+I +C ++ +A+ LF + G+ P Y ++G C G S+A L +M
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 367 GFLPDFVTEFSPSLVTYNALIY----GNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
G PD +F TYN LI G+ L+ VE ++ M S D + +VI
Sbjct: 555 GCTPD---DF-----TYNILIRAHLGGSGLISSVE----LIEEMKVCGFSADSSTIKMVI 602
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 188/446 (42%), Gaps = 50/446 (11%)
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
S + ++Y E + +V DA+ +F M P + N L + + + +
Sbjct: 29 SSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDL 88
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
M GI + T + +I+C C +++L AF + G P + LV
Sbjct: 89 VLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 148
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
+CL G S+A L D M+ PD LVT + LI G CL GRV EAL ++
Sbjct: 149 GFCLEGRVSEAVALVDRMVEMKQRPD--------LVTVSTLINGLCLKGRVSEALVLIDR 200
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE------------------AGGI 447
M E PD+V+Y V++ CK G A +L +M+E G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 448 RGVDLAVFSSL-MKGL-SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIM 505
L++F+ + MKG+ +D V Y+S+I C +G+ + EM + V +
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 506 LFDGFDKKARTRGAKESLLRMFYDLCT---SLPTFTYDTLIENCSNNEFKSVVELAKGFG 562
L D F K+ + AKE ++ ++ T + T TY++LI+ GF
Sbjct: 321 LIDVFVKEGKLLEAKE----LYNEMITRGIAPDTITYNSLID---------------GFC 361
Query: 563 MRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMF 622
+EA + + ++ +PD Y+ LI +C+ + VD ++ E+ G +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 623 SVLALIKALFHVGRHNEVRRVIQNVL 648
+ L+ G+ N + + Q ++
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMV 447
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 41/256 (16%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C + D+ ++ E+ + G +P+ TYN L+ +C+ +++ A + + M V P+V
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V++ ++DGLC + +A E+ ++M
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKM---------------------------------- 481
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
++ R+ + Y +IH +C + VD A+ +F + G +P +VTYN +I C +
Sbjct: 482 --QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ +A +FR M + G TPD N LI L + E+ EM G ++ T
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIK 599
Query: 307 KLIDCLCPQRRLSEAF 322
+ID L RRL ++F
Sbjct: 600 MVIDML-SDRRLDKSF 614
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 41/206 (19%)
Query: 52 EMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATY----------- 98
E++ KGL P + L+ C + + A ++ EMV+ G PSV TY
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 99 ------------------------NVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFN 131
N+++H C +VD+A + L V+P+VV++N
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
+I GLC K + EA+ L ++M G PD TYN LI A + L I ++ L ++MK
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGL-ISSVELIEEMKV 588
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDKAY 217
+T +I +L +DK++
Sbjct: 589 CGFSADSSTIKMVIDMLSDRRLDKSF 614
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 255/547 (46%), Gaps = 48/547 (8%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A+ V E+ SG +V T N++++A C+D ++++ L + V P++V++NT+I
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
+K ++EA EL+ M KG +P TYNT+I + K+ RA ++ +M + +
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE-RAKEVFAEMLRSGLS 337
Query: 196 VPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
TTY SL+ C +V + KVF++M + P LV ++ ++ + + A+
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F + + GL PD VI LI +C+ G + A +R EM+++G + TY+ ++ LC
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
++ L EA LF EM L P Y L+ +C +G A L +M K D
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD--- 514
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
+VTYN L+ G +G ++ A I M + P +SY+I+++ C G L +A
Sbjct: 515 -----VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNY-NSVINAYCAEGEVSKALILHDEMEH 493
F + EM + K + V NS+I YC G S ++M
Sbjct: 570 FRVWDEM----------------ISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP-TFTYDTLIEN-CSNNEF 551
G + + Y L GF ++ A + +M + +P FTY++++ C N+
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 552 KSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYME 611
K EA VL +++ PD + Y +I + N+ +A+ ++ E
Sbjct: 674 K----------------EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 612 MVHYGFA 618
M+ GF+
Sbjct: 718 MLQRGFS 724
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 240/498 (48%), Gaps = 67/498 (13%)
Query: 41 GGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
G + K T +S++ KG+ P +LI L + A+++++ M GF P V T
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE-AFELMNAMPGKGFSPGVYT 307
Query: 98 YNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
YN +++ C+ + + A + M + P+ ++ +++ C K + E E++ +M
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 155 SKGLAPDSVTYNTLITAMSKNTNL----------------------------------VI 180
S+ + PD V ++++++ +++ NL +
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELI 239
A+ L ++M QQ + TY +++H LC + +A K+F EM P T LI
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL 299
+C +Q+AM +F+ M ++ + D V NTL+ F K G+++ A E+ A+MV + IL
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P +YS L++ LC + L+EAF ++ EM+ + P +++ YC G S
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMS--LSPDDVS 417
++MI +GF+PD ++YN LIYG + +A G+++ M E L PD +
Sbjct: 608 LEKMISEGFVPD--------CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 418 YNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCA 477
YN ++ GFC+ ++ +A ++ +M E RGV+ D Y +IN + +
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIE----RGVN-----------PDRSTYTCMINGFVS 704
Query: 478 EGEVSKALILHDEMEHHG 495
+ +++A +HDEM G
Sbjct: 705 QDNLTEAFRIHDEMLQRG 722
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 189/389 (48%), Gaps = 29/389 (7%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQN--------DNAYKVLSEMVNSGFL 92
G +++T S+M + + P L+C + + D A + + +G +
Sbjct: 354 GDVVETEKVFSDMRSRDVVP------DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGMAVEP---NVVSFNTVIDGLCAKRRIKEAEEL 149
P Y +L+ YCR + AM + M + +VV++NT++ GLC ++ + EA++L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
EM + L PDS T LI K NL A+ L+ +MK++RI + TY +L+
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQ-NAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 210 TY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
++D A +++ +M++ P+ ++Y+ L++A C + + +A ++ M + + P +
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
ICN++I +C+ G +M+ G +P+ +Y+ LI + +S+AF L ++M
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 329 L--GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNAL 386
GGL P + Y +++ +C + +A + +MI +G PD TY +
Sbjct: 647 EEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD--------RSTYTCM 698
Query: 387 IYGNCLLGRVEEALGILRGMAEMSLSPDD 415
I G + EA I M + SPDD
Sbjct: 699 INGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 171/342 (50%), Gaps = 13/342 (3%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLLC----CDQLQNDNAYKVLSEMVNSGFLPSV 95
SG L K + + GL P +++I+ + C + A + +EM+ G V
Sbjct: 388 SGNLDKALMYFNSVKEAGLIP--DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
TYN +LH C+ K + EA + M A+ P+ + +IDG C ++ A EL Q+
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY- 211
M K + D VTYNTL+ K ++ D + ++ +P P +Y+ L++ LC+
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP-ISYSILVNALCSKG 564
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++ +A++V+ EMI+ +P+++ N +I YC D M G PD + N
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 272 TLITFFCKYGELEKAFEMRAEMVER--GILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
TLI F + + KAF + +M E G++P+ TY+ ++ C Q ++ EA + R+M+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
G++P Y ++ + ++AF + DEM+ +GF PD
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/504 (25%), Positives = 218/504 (43%), Gaps = 49/504 (9%)
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
F+ +I R+++EA E + SKG N LI ++ + V A +Y ++
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVR-IGWVELAWGVYQEI 226
Query: 190 KQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRV 248
+ + + T +++ LC ++K +++ G P +VTYN LI AY + +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
++A + MP +G +P NT+I CK+G+ E+A E+ AEM+ G+ P++ TY L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
+ C + + E +F +M + P + +++ + G KA + + G
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
+PD V Y LI G C G + A+ + M + + D V+YN ++ G CK
Sbjct: 407 IPDNVI--------YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 429 GELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILH 488
LG+A +L EM E A+F D +I+ +C G + A+ L
Sbjct: 459 KMLGEADKLFNEMTER--------ALFP-------DSYTLTILIDGHCKLGNLQNAMELF 503
Query: 489 DEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS--LPT-FTYDTLIEN 545
+M+ V Y L DGF K AKE ++ D+ + LPT +Y L+
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE----IWADMVSKEILPTPISYSILVNA 559
Query: 546 -CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDK 604
CS +G EA V + ++ N KP + N +I +CR N
Sbjct: 560 LCS----------------KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 605 AYNMYMEMVHYGFASHMFSVLALI 628
+ +M+ GF S LI
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLI 627
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 165/413 (39%), Gaps = 74/413 (17%)
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
++ LI Y ++++A F + +G T CN LI + G +E A+ + E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
G+ N T + +++ LC ++ + ++ G+ P Y L+ AY G
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
+AF L + M KGF SP + TYN +I G C G+ E A + M LSPD
Sbjct: 288 EAFELMNAMPGKGF--------SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 415 DVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINA 474
+Y ++ CK G++ + ++ +M R D+ + D V ++S+++
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDM------RSRDV---------VPDLVCFSSMMSL 384
Query: 475 YCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSL 534
+ G + KAL+ + ++ G + +V+Y +
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTI----------------------------- 415
Query: 535 PTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIV 594
L +G+ +G+ + A ++ N +LQ D YN ++
Sbjct: 416 ----------------------LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 595 EHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
C+R+ + +A ++ EM +++ LI +G + Q +
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 226/459 (49%), Gaps = 29/459 (6%)
Query: 89 SGFLPSVATYNVLLHAYCRDKRVDEA---MGILRGMAVEPNVVSFNTVIDGLCAKRRIKE 145
+G ++ T N++++ +CR + A +G + + EP+ +FNT+I GL + ++ E
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI 205
A L+ M G PD VTYN+++ + ++ + + A+ L +M+++ + TY+++I
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL-ALDLLRKMEERNVKADVFTYSTII 235
Query: 206 HLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLT 264
LC +D A +F EM G + S+VTYN L+ C + D + + M R +
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 265 PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
P+ + N L+ F K G+L++A E+ EM+ RGI PN TY+ L+D C Q RLSEA ++
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
M+ SP + +L+ YC+V + + +G + + VTY+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN--------AVTYS 407
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA 444
L+ G C G+++ A + + M + PD ++Y I++ G C G+L KA E+ ++ ++
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 445 GGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYI 504
+DL + V Y ++I C G+V A L + G + Y
Sbjct: 468 ----KMDLGI-----------VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 505 MLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLI 543
++ G KK A LLR + + TY+TLI
Sbjct: 513 VMISGLCKKGSLSEA-NILLRKMEEDGNAPNDCTYNTLI 550
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 210/420 (50%), Gaps = 26/420 (6%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVID 135
A ++ MV +G P V TYN +++ CR A+ +LR M V+ +V +++T+ID
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
LC I A L +EM +KG+ VTYN+L+ + K A+ L D + ++ +P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 196 VPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
T L + + +A +++ EMI G P+++TYN L+ YC ++R+ +A +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
M +PD V +LI +C ++ ++ + +RG++ NA TYS L+ C
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE 375
++ A +LF+EM+ G+ P Y L+ C G+ KA + +++ ++
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK--------SK 468
Query: 376 FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF 435
+V Y +I G C G+VE+A + + + P+ ++Y ++ISG CK G L +A
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 436 ELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
L+ +M+E G ++ YN++I A+ +G+++ + L +EM+ G
Sbjct: 529 ILLRKMEEDGNA---------------PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%)
Query: 74 LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTV 133
++ D+A + EM+ S LPS+ ++ A R K+ FN V
Sbjct: 67 IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQ-------------------FNLV 107
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+D +++ G+A + T N +I + L MK
Sbjct: 108 LD-------------FCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY 154
Query: 194 IPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
P TT+ +LI L V +A + M+ +G +P +VTYN +++ C A+
Sbjct: 155 EP-DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ R M +R + D +T+I C+ G ++ A + EM +GI + TY+ L+ L
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C + ++ L ++M+ + P + L+ + G+ +A L EMI +G
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI---- 329
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
SP+++TYN L+ G C+ R+ EA +L M SPD V++ +I G+C
Sbjct: 330 ----SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC------ 379
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMK-GL-SDEVNYNSVINAYCAEGEVSKALILHDE 490
MV+ + G + VF ++ K GL ++ V Y+ ++ +C G++ A L E
Sbjct: 380 -----MVKRVDDG------MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 491 MEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS---LPTFTYDTLIENCS 547
M HG L + Y +L DG G E L +F DL S L Y T+IE
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDN----GKLEKALEIFEDLQKSKMDLGIVMYTTIIEG-- 482
Query: 548 NNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYN 607
+ KG G +A ++ ++ KP+ Y +I C++ ++ +A
Sbjct: 483 ---------MCKG----GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 608 MYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSC 651
+ +M G A + + LI+A G ++I+ ++SC
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE-MKSC 572
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 142/281 (50%), Gaps = 7/281 (2%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSV 95
V G L + EM +G+ P + L+ C Q + A +L MV + P +
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
T+ L+ YC KRVD+ M + R ++ + N V+++ ++ G C +IK AEEL QE
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT-Y 211
M S G+ PD +TY L+ + N L +A+ +++ +++ ++ + YT++I +C
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLE-KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
V+ A+ +F + G +P+++TY +I C + + +A + R M + G P+ N
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
TLI + G+L + ++ EM G +A + +ID L
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 5/260 (1%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVID 135
A ++ EM+ G P++ TYN L+ YC R+ EA +L M P++V+F ++I
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
G C +R+ + ++ + ++ +GL ++VTY+ L+ ++ + + A L+ +M +
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL-AEELFQEMVSHGVL 435
Query: 196 VPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
TY L+ LC ++KA ++F ++ S + +V Y +I C +V+DA +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F +P +G+ P+ + +I+ CK G L +A + +M E G PN TY+ LI
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 315 QRRLSEAFDLFREMLGGGLS 334
L+ + L EM G S
Sbjct: 556 DGDLTASAKLIEEMKSCGFS 575
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 159/613 (25%), Positives = 273/613 (44%), Gaps = 96/613 (15%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA-- 122
LI LC + ND A ++ EM+ LPS+ TYN L+ YC+ +++ + M
Sbjct: 220 LIDGLCKGKRMND-AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 123 -VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
+EP++++FNT++ GL +++AE +L+EM G PD+ T++ L S N
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK-AEA 337
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIH 240
A+ +Y+ + + T + L++ LC ++KA ++ +A G P+ V YN +I
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
YC + + A M +G+ PD + N LI FC+ GE+E A + +M +G+ P
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
+ +TY+ LI + + FD+ +EM G P +Y L+ C + +A ++
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
+M +G SP + YN LI G C G++E+A + M + + + V+YN
Sbjct: 518 RDMEDRGV--------SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEV-NYNSVINAYCAEG 479
+I G G+L +A +L++E+ KGL +V YNS+I+ Y G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISR----------------KGLKPDVFTYNSLISGYGFAG 613
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF-T 538
V + + L++EM+ G PT T
Sbjct: 614 NVQRCIALYEEMKRSGIK-------------------------------------PTLKT 636
Query: 539 YDTLIENCSNNEFKSVVELAKG-FGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHC 597
Y LI C+ K +EL + FG + + KPD VYN ++ +
Sbjct: 637 YHLLISLCT----KEGIELTERLFG----------------EMSLKPDLLVYNGVLHCYA 676
Query: 598 RRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFE 657
+++KA+N+ +M+ + +LI VG+ EVR +I +N E
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLID------EMNARE 730
Query: 658 LHKALSETGVIVR 670
+ +IV+
Sbjct: 731 MEPEADTYNIIVK 743
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 233/505 (46%), Gaps = 76/505 (15%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
++A VL EM + GF+P T+++L Y +++ + A+G+ V+ N + + +
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
++ LC + +I++AEE+L +KGL P+ V YNT+I + +LV + + + M++Q
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI-EAMEKQG 419
Query: 194 IPVPWTTYTSLIHLLC-------------------------TYNV-----------DKAY 217
+ Y LI C TYN+ DK +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFF 277
+ EM +G P++V+Y LI+ C ++ +A + R M DRG++P I N LI
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 278 CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
C G++E AF EM+++GI N TY+ LID L +LSEA DL E+ GL P
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+ Y +L+ Y G + L +EM G P+L TY+ LI C +E
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSG--------IKPTLKTYHLLI-SLCTKEGIE 650
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
R EMSL PD + YN V+ + G++ KAF L +M E G+D ++S
Sbjct: 651 LT---ERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS--IGLDKTTYNS 705
Query: 458 LMKG------------LSDEVN----------YNSVINAYCAEGEVSKALILHDEMEHHG 495
L+ G L DE+N YN ++ +C + A + + EM+ G
Sbjct: 706 LILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Query: 496 SLRASVLYIMLFDGFDKKARTRGAK 520
L + L G ++ R++ A+
Sbjct: 766 FLLDVCIGNELVSGLKEEWRSKEAE 790
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 160/605 (26%), Positives = 255/605 (42%), Gaps = 100/605 (16%)
Query: 43 LLKTTTTVSE-------MNRKGLDPARESLIHLLCCDQLQNDNAYKV----LSEMVNSGF 91
LL + +SE + +G+ P+ +SL LL D L ++V ++ S F
Sbjct: 118 LLNESKMISEAADLFFALRNEGIYPSSDSLTLLL--DHLVKTKQFRVTINVFLNILESDF 175
Query: 92 LPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEE 148
PS Y + A + V + + + M + P+V +N +IDGLC +R+ +AE+
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 149 LLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL 208
L+D+M +R+ TY +LI
Sbjct: 236 ------------------------------------LFDEMLARRLLPSLITYNTLIDGY 259
Query: 209 CTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
C N +K++KV M A EPSL+T+N L+ V+DA + + M D G PDA
Sbjct: 260 CKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDA 319
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
+ L + + E A + V+ G+ NA T S L++ LC + ++ +A ++
Sbjct: 320 FTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGR 379
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
+ GL P E Y ++ YC G+ A + M +G PD + YN LI
Sbjct: 380 EMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA--------YNCLI 431
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
C LG +E A + M +SP +YNI+I G+ + E K F+++ EM++ G +
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
V V+Y ++IN C ++ +A I+ +ME G +Y ML
Sbjct: 492 PNV---------------VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 508 DGFDKKART----RGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGM 563
DG K + R +KE L + L TY+TLI+ G M
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGI-----ELNLVTYNTLID---------------GLSM 576
Query: 564 RGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFS 623
G +EA +L + + KPD YN LI + NV + +Y EM G + +
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 624 VLALI 628
LI
Sbjct: 637 YHLLI 641
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 195/480 (40%), Gaps = 55/480 (11%)
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+ +A +F + G PS + L+ + + + +F + + P +
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
I K ++ K E+ M I P+ Y+ LID LC +R+++A LF EML
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
L P Y L+ YC G K+F +R+ M PSL+T+N L+ G
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMK--------ADHIEPSLITFNTLLKGLFK 296
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK-------LGELGKAFELMVEMD--- 442
G VE+A +L+ M ++ PD +++I+ G+ LG A + V+M+
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
Query: 443 ---------EAGGIRGVDLAVFSSLMKGL-SDEVNYNSVINAYCAEGEVSKALILHDEME 492
+ G I + + + KGL +EV YN++I+ YC +G++ A + + ME
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME 416
Query: 493 HHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM-FYDLCTSLPTFT------------- 538
G + Y L F + A++ + +M + S+ T+
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 539 --YDTLIENCSNNEFKSVVE-------LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVY 589
+D L E N +VV L KG + EA V + P +Y
Sbjct: 477 KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL----EAQIVKRDMEDRGVSPKVRIY 532
Query: 590 NFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLR 649
N LI C + ++ A+ EM+ G ++ + LI L G+ +E ++ + R
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 154/356 (43%), Gaps = 79/356 (22%)
Query: 50 VSEMNRKGLDPARESLIHLLCC--DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
V++M KG+ P+ E+ L+ + + D + +L EM ++G +P+V +Y L++ C+
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 108 DKRVDEAMGILRGM--------------------------------------AVEPNVVS 129
++ EA + R M +E N+V+
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
+NT+IDGL ++ EAE+LL E++ KGL PD TYN+LI+ N V R IALY++M
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN-VQRCIALYEEM 625
Query: 190 KQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
K+ I TY LI L ++ ++F EM +P L+ YN ++H Y ++
Sbjct: 626 KRSGIKPTLKTYHLLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDME 682
Query: 250 DAMGIFRGMPD-----------------------------------RGLTPDAVICNTLI 274
A + + M + R + P+A N ++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
C+ + A+ EM E+G L + ++L+ L + R EA + EM G
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNG 798
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 207/407 (50%), Gaps = 35/407 (8%)
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
+YN++++ CR R A+ ++ M EP+VV+ +++I+G C R+ +A +L+ +M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYN 212
G PD V YNT+I K LV A+ L+D+M++ + TY SL+ L C+
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCK-IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
A ++ +M+ P+++T+ +I + + +AM ++ M R + PD N+
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
LI C +G +++A +M MV +G LP+ TY+ LI+ C +R+ E LFREM G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
L Y ++ Y G A + M + P++ TY+ L+YG C+
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-----------PNIRTYSILLYGLCM 393
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
RVE+AL + M + + D +YNIVI G CK+G + A++L
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL--------------- 438
Query: 453 AVFSSL-MKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
F SL KGL D V+Y ++I+ +C + + K+ +L+ +M+ G L
Sbjct: 439 --FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 183/407 (44%), Gaps = 27/407 (6%)
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
P++V F+ V+ + + L M G+ D +YN +I + + + VI A++
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVI-ALS 125
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
+ +M + T +SLI+ C N V A + ++M GF P +V YN +I C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
V DA+ +F M G+ DAV N+L+ C G A + +MV R I+PN
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
T++ +ID + + SEA L+ EM + P + Y +L+ C+ G +A + D M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS 423
+ KG LPD +VTYN LI G C RV+E + R MA+ L D ++YN +I
Sbjct: 306 VTKGCLPD--------VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 424 GFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLM-----KGLS------------DEV 466
G+ + G A E+ MD IR + ++ M K L D
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 467 NYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
YN VI+ C G V A L + G V Y + GF +K
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 181/373 (48%), Gaps = 20/373 (5%)
Query: 48 TTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHA 104
+ V +M + G +P SLI+ C D A ++S+M GF P V YN ++
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 105 YCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPD 161
C+ V++A+ + M V + V++N+++ GLC R +A L+++M + + P+
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 162 SVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVF 220
+T+ +I K A+ LY++M ++ + TY SLI+ LC + VD+A ++
Sbjct: 244 VITFTAVIDVFVKEGKFS-EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 221 TEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKY 280
M+ G P +VTYN LI+ +C RV + +FR M RGL D + NT+I + +
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 281 GELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
G + A E+ + M R PN TYS L+ LC R+ +A LF M + Y
Sbjct: 363 GRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 419
Query: 341 FNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEAL 400
++ C +G A+ L + KG PD +V+Y +I G C + +++
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD--------VVSYTTMISGFCRKRQWDKSD 471
Query: 401 GILRGMAEMSLSP 413
+ R M E L P
Sbjct: 472 LLYRKMQEDGLLP 484
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 193/454 (42%), Gaps = 44/454 (9%)
Query: 183 IALYDQMKQQRIPVPWTTYTS--LIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIH 240
I L+ +M Q R P+P S L + + N D +F M G L +YN +I+
Sbjct: 54 IDLFCKMIQSR-PLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVIN 112
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
C R A+ + M G PD V ++LI FC+ + A ++ ++M E G P
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
+ Y+ +ID C +++A +LF M G+ Y +LV C G +S A L
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
+M+ + +P+ ++T+ A+I G+ EA+ + M + PD +YN
Sbjct: 233 RDMVMRDIVPN--------VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG-LSDEVNYNSVINAYCAEG 479
+I+G C G + +A +++ DL V KG L D V YN++IN +C
Sbjct: 285 LINGLCMHGRVDEAKQML------------DLMV----TKGCLPDVVTYNTLINGFCKSK 328
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM------------F 527
V + L EM G + ++ Y + G+ + R A+E RM
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILL 388
Query: 528 YDLCTSLPTFTYDTLIENCSNNEFKSVVE----LAKGFGMRGLKNEAASVLNTVLQWNYK 583
Y LC + L EN +E + + + G G +A + ++ K
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Query: 584 PDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGF 617
PD Y +I CR+R DK+ +Y +M G
Sbjct: 449 PDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 158/376 (42%), Gaps = 39/376 (10%)
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
LE+ ++ +M++ LP+ +SK++ + + LF M G+ Y+Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
++ C F A + +M+ G+ PD +VT ++LI G C RV +A+ +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPD--------VVTVSSLINGFCQGNRVFDAIDL 161
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
+ M EM PD V YN +I G CK+G + A EL M E G+R
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM-ERDGVR-------------- 206
Query: 463 SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKES 522
+D V YNS++ C G S A L +M + + + + D F K+ + A +
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK- 265
Query: 523 LLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNY 582
L C FTY++LI G M G +EA +L+ ++
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLIN---------------GLCMHGRVDEAKQMLDLMVTKGC 310
Query: 583 KPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRR 642
PD YN LI C+ + VD+ ++ EM G + +I+ F GR + +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 643 VIQNVLRSCNINGFEL 658
+ + NI + +
Sbjct: 371 IFSRMDSRPNIRTYSI 386
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 203/382 (53%), Gaps = 18/382 (4%)
Query: 85 EMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKR 141
E++++GF +V +N+L++ +C++ + +A + + +++P VVSFNT+I+G C
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
+ E L +M PD TY+ LI A+ K N + A L+D+M ++ + +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKE-NKMDGAHGLFDEMCKRGLIPNDVIF 348
Query: 202 TSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
T+LIH +D + + +M++ G +P +V YN L++ +C + A I GM
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
RGL PD + TLI FC+ G++E A E+R EM + GI + +S L+ +C + R+ +
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A REML G+ P + Y ++ A+C G+ F L EM G + PS+
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV--------PSV 520
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
VTYN L+ G C LG+++ A +L M + + PDD++YN ++ G + K + ++
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY---IQ 577
Query: 441 MDEAGGIRGVDLAVFSSLMKGL 462
E G + DLA + S++ L
Sbjct: 578 KPEIGIV--ADLASYKSIVNEL 597
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 188/427 (44%), Gaps = 42/427 (9%)
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIH 240
AI + ++ R VP +L+ + N + + E++ +GF ++ +N L++
Sbjct: 189 AIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMN 248
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
+C + DA +F + R L P V NTLI +CK G L++ F ++ +M + P
Sbjct: 249 KFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRP 308
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
+ TYS LI+ LC + ++ A LF EM GL P + + L+ + GE
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
+M+ KG PD +V YN L+ G C G + A I+ GM L PD ++Y
Sbjct: 369 QKMLSKGLQPD--------IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGE 480
+I GFC+ G++ A E+ EMD+ G++L D V +++++ C EG
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQ----NGIEL-----------DRVGFSALVCGMCKEGR 465
Query: 481 VSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF-TY 539
V A EM G V Y M+ D F KK + + L M D +P+ TY
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD--GHVPSVVTY 523
Query: 540 DTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRR 599
+ L+ G G A +L+ +L PD YN L+ H R
Sbjct: 524 NVLLN---------------GLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRH 568
Query: 600 RNVDKAY 606
N K Y
Sbjct: 569 ANSSKRY 575
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 157/329 (47%), Gaps = 7/329 (2%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATY 98
G + E+ ++ L P S L+ C D +++ +M S P V TY
Sbjct: 254 GNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTY 313
Query: 99 NVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
+ L++A C++ ++D A G+ M + PN V F T+I G I +E Q+M S
Sbjct: 314 SALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLS 373
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT-YNVD 214
KGL PD V YNTL+ KN +LV A + D M ++ + TYT+LI C +V+
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVA-ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
A ++ EM +G E V ++ L+ C RV DA R M G+ PD V ++
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
FCK G+ + F++ EM G +P+ TY+ L++ LC ++ A L ML G+
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
P + Y L+ + SK + + E+
Sbjct: 553 PDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 176/449 (39%), Gaps = 57/449 (12%)
Query: 198 WTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSL-VTYNELIHAYCCRDRVQDAMGIF 255
+T SLI L+ + + A VF ++ P + L+ Y + DA+ F
Sbjct: 134 FTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCF 193
Query: 256 R-------GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
R +P RG C L+ K + E+++ G N ++ L
Sbjct: 194 RLSRKHRFDVPIRG-------CGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNIL 246
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
++ C + +S+A +F E+ L P ++ L+ YC VG + F L+ +M
Sbjct: 247 MNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
PD + TY+ALI C +++ A G+ M + L P+DV + +I G +
Sbjct: 307 RPD--------VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 429 GELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKALIL 487
GE+ +LM E + L KGL D V YN+++N +C G++ A +
Sbjct: 359 GEI----DLMKE------------SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 488 HDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCS 547
D M G + Y L DGF + A E +R D +N
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALE--IRKEMD--------------QNGI 446
Query: 548 NNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYN 607
+ L G G +A L +L+ KPD Y ++ C++ + +
Sbjct: 447 ELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 608 MYMEMVHYGFASHMFSVLALIKALFHVGR 636
+ EM G + + L+ L +G+
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 376 FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF 435
F ++ +N L+ C G + +A + + + SL P VS+N +I+G+CK+G L + F
Sbjct: 236 FPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGF 295
Query: 436 ELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
L +M+++ + D Y+++INA C E ++ A L DEM G
Sbjct: 296 RLKHQMEKS---------------RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 496 SLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSL-PTFT-YDTLIEN-CSNNEFK 552
+ V++ L G + KES +M L L P Y+TL+ C N +
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKM---LSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 553 SVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
+ + G RGL+ PD Y LI CR +V+ A + EM
Sbjct: 398 AARNIVDGMIRRGLR----------------PDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 613 VHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
G AL+ + GR + R ++ +LR+
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 8/139 (5%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATY 98
G ++ + EM R G+ P + ++ C + +K+L EM + G +PSV TY
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Query: 99 NVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
NVLL+ C+ ++ A +L M V P+ +++NT+++G R ++ +Q+
Sbjct: 524 NVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQK-PE 580
Query: 156 KGLAPDSVTYNTLITAMSK 174
G+ D +Y +++ + +
Sbjct: 581 IGIVADLASYKSIVNELDR 599
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 190/365 (52%), Gaps = 13/365 (3%)
Query: 85 EMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTVIDGLCAKR 141
+M+ GF PS+ T LL+ +C+ R EA+ + + G PNVV +NTVI+GLC R
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
+ A E+ M KG+ D+VTYNTLI+ +S N+ A L M +++I +
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLS-NSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 202 TSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
T+LI N+ +A ++ EMI P++ TYN LI+ +C + DA +F M
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
+G PD V NTLIT FCK +E ++ EM +G++ +A TY+ LI C +L+
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A +F M+ G+SP Y L+ C G+ KA + +++ +E +
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK--------SEMDVDI 429
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
+TYN +I G C +++EA + R + + PD ++Y +ISG C+ G +A +L
Sbjct: 430 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRR 489
Query: 441 MDEAG 445
M E G
Sbjct: 490 MKEDG 494
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 207/471 (43%), Gaps = 52/471 (11%)
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
+ +A L EM P V + ++T ++K I I LY +M+ I ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDI-VIYLYHKMENLGISHDLYSF 117
Query: 202 TSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
T LIH C + A + +M+ GF PS+VT L++ +C +R Q+A+ + M
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
G P+ VI NT+I CK +L A E+ M ++GI +A TY+ LI L R ++
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A L R+M+ + P + L+ + G +A +L EMI + +P+ +
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN--------V 289
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
TYN+LI G C+ G + +A + M PD V+YN +I+GFCK + +L E
Sbjct: 290 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 441 MDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRAS 500
M G + D YN++I+ YC G+++ A + + M G
Sbjct: 350 MTYQGLV---------------GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 501 VLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS---LPTFTYDTLIEN-CSNNEFKSVVE 556
V Y +L D G E L M DL S + TY+ +I+ C ++ K
Sbjct: 395 VTYNILLDCLCNN----GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK---- 446
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRR---RNVDK 604
EA + ++ + KPD Y +I CR+ R DK
Sbjct: 447 ------------EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 231/538 (42%), Gaps = 79/538 (14%)
Query: 62 RESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---L 118
RE L + L C ++ D+A+ + EM+ S +PS+ + +L + + D + + +
Sbjct: 48 RERLRNELHC--IKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM 105
Query: 119 RGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL 178
+ + ++ SF +I C R+ A LL +M G P VT +L+ + N
Sbjct: 106 ENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQG-NR 164
Query: 179 VIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNEL 238
A++L D M GF P++V YN +
Sbjct: 165 FQEAVSLVDSMD----------------------------------GFGFVPNVVIYNTV 190
Query: 239 IHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
I+ C + +A+ +F M +G+ DAV NTLI+ G A + +MV+R I
Sbjct: 191 INGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
Query: 299 LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
PN ++ LID + L EA +L++EM+ + P + Y +L+ +C+ G A +
Sbjct: 251 DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKY 310
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
+ D M+ KG PD +VTYN LI G C RVE+ + + M L D +Y
Sbjct: 311 MFDLMVSKGCFPD--------VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAE 478
N +I G+C+ G+L A ++ M VD V D V YN +++ C
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRM--------VDCGV-------SPDIVTYNILLDCLCNN 407
Query: 479 GEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFT 538
G++ KAL++ ++++ + Y ++ G RT KE+
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGL---CRTDKLKEAWC-------------L 451
Query: 539 YDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEH 596
+ +L + + + + G +GL+ EA + + + + P +Y+ + +H
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 157/395 (39%), Gaps = 39/395 (9%)
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
D A+ +F EM+ S PS+V + ++ ++ + ++ M + G++ D L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
I FC+ L A + +M++ G P+ T L++ C R EA L M G G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
P Y ++ C + + A + M KG D VTYN LI G
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD--------AVTYNTLISGLSNS 232
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA 453
GR +A +LR M + + P+ + + +I F K G L +A L EM R V
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR----RSVVPN 288
Query: 454 VFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
VF+ YNS+IN +C G + A + D M G V Y L GF K
Sbjct: 289 VFT-----------YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 514 ARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASV 573
R + M Y FTY+TLI G+ G N A V
Sbjct: 338 KRVEDGMKLFCEMTYQGLVG-DAFTYNTLIH---------------GYCQAGKLNVAQKV 381
Query: 574 LNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNM 608
N ++ PD YN L+ C ++KA M
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 196/470 (41%), Gaps = 50/470 (10%)
Query: 182 AIALYDQMKQQRIPVP-WTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELI 239
A +L+ +M Q R P+P +T ++ ++ N D ++ +M G L ++ LI
Sbjct: 63 AFSLFCEMLQSR-PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL 299
H +C R+ A+ + M G P V +L+ FC+ ++A + M G +
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
PN Y+ +I+ LC R L+ A ++F M G+ Y L+ G ++ A L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+M+ + + P+++ + ALI G + EA + + M S+ P+ +YN
Sbjct: 242 LRDMVKR--------KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 420 IVISGFCKLGELGKA---FELMVEMDEAGGIRGVDLAVFSSLMKG-LSDEVNYNSVINAY 475
+I+GFC G LG A F+LMV KG D V YN++I +
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVS-------------------KGCFPDVVTYNTLITGF 334
Query: 476 CAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP 535
C V + L EM + G + + Y L G+ + + A++ RM D S
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPD 393
Query: 536 TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVE 595
TY+ L++ NN G +A ++ + + D YN +I
Sbjct: 394 IVTYNILLDCLCNN---------------GKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 596 HCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQ 645
CR + +A+ ++ + G + + +I L G E ++ +
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 162/396 (40%), Gaps = 55/396 (13%)
Query: 282 ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYF 341
+ + AF + EM++ +P+ +++++ + + L+ +M G+S Y++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 342 NLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALG 401
L+ +C S A L +M+ GF PS+VT +L+ G C R +EA+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGF--------RPSIVTLGSLLNGFCQGNRFQEAVS 170
Query: 402 ILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG 461
++ M P+ V YN VI+G CK +L A E+ M E GIR
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM-EKKGIR------------- 216
Query: 462 LSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKE 521
+D V YN++I+ G + A L +M + + L D F K+ A+
Sbjct: 217 -ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275
Query: 522 SLLRMFYDLCTSLP-TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQW 580
M + +P FTY++LI GF + G +A + + ++
Sbjct: 276 LYKEMIRR--SVVPNVFTYNSLIN---------------GFCIHGCLGDAKYMFDLMVSK 318
Query: 581 NYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEV 640
PD YN LI C+ + V+ ++ EM + G F+ LI G+ N
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 641 RRVIQ--------------NVLRSCNINGFELHKAL 662
++V N+L C N ++ KAL
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 178/662 (26%), Positives = 273/662 (41%), Gaps = 95/662 (14%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNV 127
C+ + A L+ M + LP+V TY+ LL K++ +L M +E P+
Sbjct: 313 CEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSP 372
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM-----SKNTNLVIRA 182
FN+++ C A +LL++M G P V YN LI ++ S N +L+ A
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLA 432
Query: 183 IALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHA 241
Y +M + + +S LC+ +KA+ V EMI GF P TY+++++
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
C +++ A +F M GL D ++ FCK G +E+A + EM E G PN
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
TY+ LI +++S A +LF ML G P Y L+ +C G+ KA + +
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 362 EMIHKGFLPDFVTEFS--------PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP 413
M +PD F P++VTY AL+ G C RVEEA +L M+ P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 414 DDVSYNIVISGFCKLGELGKAFELMVEMDEAG----------------GIRGVDLA--VF 455
+ + Y+ +I G CK+G+L +A E+ EM E G ++ DLA V
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 456 SSLMKG--LSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
S +++ + V Y +I+ C G+ +A L ME G V Y + DGF
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 514 ARTRGAKESLLRMFYDLCTSLPTF-TYDTLIENCSNN-----------EFKSVVELAKGF 561
+ E L RM P + TY LI++C N E K
Sbjct: 793 GKIETCLELLERMGSK--GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 562 GMRGLKN-------EAASVLNTVLQWNYKPDGAVY------------------------- 589
G R + E+ +L+ + Q + P +VY
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 590 ------------NFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRH 637
N LI C V+ A+ ++ EM G M S +LIK LF +
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 638 NE 639
+E
Sbjct: 971 SE 972
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 157/609 (25%), Positives = 259/609 (42%), Gaps = 84/609 (13%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE-------------- 124
A + L + + F PS +TYN L+ A+ + R+D A I R M++
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 125 ---------------------PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSV 163
P+ V + +I GLC +EA + L M + P+ V
Sbjct: 279 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338
Query: 164 TYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTE 222
TY+TL+ L L M + P P + SL+H CT + AYK+ +
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSP-KIFNSLVHAYCTSGDHSYAYKLLKK 397
Query: 223 MIASGFEPSLVTYNELIHAYC-------CRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
M+ G P V YN LI + C C D + A + M G+ + + ++
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNC-DLLDLAEKAYSEMLAAGVVLNKINVSSFTR 456
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSP 335
C G+ EKAF + EM+ +G +P+ TYSK+++ LC ++ AF LF EM GGL
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 336 REYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGR 395
Y Y +V ++C G +A +EM G +P++VTY ALI+ +
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVG--------CTPNVVTYTALIHAYLKAKK 568
Query: 396 VEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVF 455
V A + M P+ V+Y+ +I G CK G++ KA ++ M + + VD+
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM--- 625
Query: 456 SSLMKGLSDE------VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDG 509
K D V Y ++++ +C V +A L D M G ++Y L DG
Sbjct: 626 --YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Query: 510 FDKKARTRGAKESLLRMFYDLCTSLPT--FTYDTLIENCSNNEFKSVVELAKGFGMRGLK 567
K + A+E M P +TY +LI+ + F ++ +
Sbjct: 684 LCKVGKLDEAQEVKTEMSEH---GFPATLYTYSSLID--------------RYFKVKR-Q 725
Query: 568 NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLAL 627
+ A+ VL+ +L+ + P+ +Y +I C+ D+AY + M G ++ + A+
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 628 IKALFHVGR 636
I +G+
Sbjct: 786 IDGFGMIGK 794
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 149/572 (26%), Positives = 244/572 (42%), Gaps = 48/572 (8%)
Query: 99 NVLLHAYCRDKRVD---EAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
NVL+ +CR+ E +G L+ P+ ++N +I R+ A + +EM+
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT-YTSLIHLLCTYNV- 213
L D T ++ K A+ L + VP T YT LI LC ++
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWR-EALTLVETENF----VPDTVFYTKLISGLCEASLF 318
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
++A M A+ P++VTY+ L+ + ++ + M G P I N+L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR------LSEAFDLFRE 327
+ +C G+ A+++ +MV+ G +P Y+ LI +C + L A + E
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
ML G+ + + C G++ KAF + EMI +GF+PD TY+ ++
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD--------TSTYSKVL 490
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
C ++E A + M L D +Y I++ FCK G + +A + EM E G
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
V V Y ++I+AY +VS A L + M G L V Y L
Sbjct: 551 PNV---------------VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 508 DGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNN-EFKSVVE---LAKGFGM 563
DG K G E ++F +C S D + +N E +VV L GF
Sbjct: 596 DGHCKA----GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 564 RGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFS 623
EA +L+ + +P+ VY+ LI C+ +D+A + EM +GF + +++
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 624 VLALIKALFHVGRHNEVRRVIQNVLR-SCNIN 654
+LI F V R + +V+ +L SC N
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 205/464 (44%), Gaps = 63/464 (13%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTV 133
+ A K +EM G P+V TY L+HAY + K+V A + M E PN+V+++ +
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 134 IDGLCAKRRIKEAEELLQEM-NSKGLA---------------PDSVTYNTLITAMSKNTN 177
IDG C ++++A ++ + M SK + P+ VTY L+ K ++
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK-SH 653
Query: 178 LVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYN 236
V A L D M + Y +LI LC +D+A +V TEM GF +L TY+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER 296
LI Y R A + M + P+ VI +I CK G+ ++A+++ M E+
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 297 GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
G PN TY+ +ID ++ +L M G++P Y L+ C G A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 357 FHLRDEM--------------IHKGFLPDFVTEF-----------SPSLVTYNALIYGNC 391
+L +EM + +GF +F+ +P L Y LI
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLI 893
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVS--YNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
R+E AL +L +A S + D S YN +I C ++ AF+L EM + G I
Sbjct: 894 KAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP- 952
Query: 450 VDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
++ F SL+KGL ++S+AL+L D + H
Sbjct: 953 -EMQSFCSLIKGLF-------------RNSKISEALLLLDFISH 982
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 200/372 (53%), Gaps = 18/372 (4%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVIDGLC 138
V EM+ P+V T+NV+++A C+ ++++A ++ M V PNVVS+NT+IDG C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 139 ---AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
++ +A+ +L+EM ++P+ T+N LI K+ NL ++ ++ +M Q +
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP-GSMKVFKEMLDQDVK 328
Query: 196 VPWTTYTSLIHLLCT-YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
+Y SLI+ LC + +A + +M+++G +P+L+TYN LI+ +C D +++A+ +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F + +G P + N LI +CK G+++ F ++ EM GI+P+ TY+ LI LC
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
+ A LF ++ GL P + L+ YC GE KA L EM G
Sbjct: 449 NGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG------- 500
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGM-AEMSLSPDDVSYNIVISGFCKLGELGK 433
P +TYN ++ G C G ++ A + M E L + SYN+++ G+ + G+L
Sbjct: 501 -LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 434 AFELMVEMDEAG 445
A L+ EM E G
Sbjct: 560 ANMLLNEMLEKG 571
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 207/442 (46%), Gaps = 60/442 (13%)
Query: 90 GFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEA 146
G+ S + L+ A ++ R + + + M ++PNV +FN VI+ LC ++ +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 147 EELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
+++++M G +P+ V+YNTLI K
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCK-------------------------------- 270
Query: 207 LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPD 266
L + KA V EM+ + P+L T+N LI + D + +M +F+ M D+ + P+
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
+ N+LI C G++ +A MR +MV G+ PN TY+ LI+ C L EA D+F
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 327 EMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNAL 386
+ G G P Y L+ AYC +G+ F L++EM +G +PD + TYN L
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD--------VGTYNCL 442
Query: 387 IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGG 446
I G C G +E A + + L PD V+++I++ G+C+ GE KA L+ EM + G
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG- 500
Query: 447 IRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVL-YIM 505
+K + YN V+ YC EG + A + +ME LR +V Y +
Sbjct: 501 ------------LK--PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546
Query: 506 LFDGFDKKARTRGAKESLLRMF 527
L G+ +K + A L M
Sbjct: 547 LLQGYSQKGKLEDANMLLNEML 568
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 195/434 (44%), Gaps = 69/434 (15%)
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
V+ EMI +P++ T+N +I+A C ++ A + M G +P+ V NTLI +C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 279 KYG---ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSP 335
K G ++ KA + EMVE + PN T++ LID L + +F+EML + P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 336 REYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGR 395
+Y +L+ C G+ S+A +RD+M+ G P+L+TYNALI G C
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGV--------QPNLITYNALINGFCKNDM 381
Query: 396 VEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVF 455
++EAL + + P YN++I +CKLG++ F L EM+ G + D+ +
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP--DVGTY 439
Query: 456 SSLM---------------------KGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
+ L+ KGL D V ++ ++ YC +GE KA +L EM
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSV 554
G + Y ++ G+ K+ + A +M + + +Y+ L++
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ---------- 549
Query: 555 VELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
G+ +G +A +LN +L+ P+ Y IV+ EMV
Sbjct: 550 -----GYSQKGKLEDANMLLNEMLEKGLVPNRITYE--IVKE--------------EMVD 588
Query: 615 YGFA----SHMFSV 624
GF H+F+V
Sbjct: 589 QGFVPDIEGHLFNV 602
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 168/341 (49%), Gaps = 27/341 (7%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQNDN---AYKVLSEMVNSGFLPSVA 96
+G + K + EM + P + ++L ++DN + KV EM++ P+V
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTF-NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
+YN L++ C ++ EA+ + M V+PN++++N +I+G C +KEA ++ +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYN 212
+G P + YN LI A K + AL ++M+++ I TY LI LC N
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCK-LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
++ A K+F ++ + G P LVT++ L+ YC + + A + + M GL P + N
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 273 LITFFCKYGELEKAFEMRAEM-VERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
++ +CK G L+ A MR +M ER + N +Y+ L+ + +L +A L EML
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
GL P Y E +++EM+ +GF+PD
Sbjct: 571 GLVPNRITY-----------EI-----VKEEMVDQGFVPDI 595
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 162/358 (45%), Gaps = 48/358 (13%)
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
+++I + L+ + E FE G +A + L+ L + R ++ ++
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 326 REMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNA 385
+EM+ + P + + ++ A C G+ +KA + ++M G SP++V+YN
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG--------CSPNVVSYNT 263
Query: 386 LIYGNCLL---GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
LI G C L G++ +A +L+ M E +SP+ ++NI+I GF K L + ++ EM
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM- 322
Query: 443 EAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVL 502
+D V ++ ++YNS+IN C G++S+A+ + D+M G +
Sbjct: 323 -------LDQDVKPNV-------ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 503 YIMLFDGFDKKARTRGAKESLLRMFYDL--CTSLPTF-TYDTLIENCSNNEFKSVVELAK 559
Y L +GF K + A L MF + ++PT Y+ LI+ + + ++
Sbjct: 369 YNALINGFCKNDMLKEA----LDMFGSVKGQGAVPTTRMYNMLID-----AYCKLGKIDD 419
Query: 560 GFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGF 617
GF ++ V PD YN LI CR N++ A ++ ++ G
Sbjct: 420 GFALKEEMEREGIV----------PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 229/480 (47%), Gaps = 73/480 (15%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----PNVVSFNTV 133
+A +V +MV G +V T+NVL++ YC + ++++A+G+L M E P+ V++NT+
Sbjct: 187 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ + K R+ + +ELL +M GL P+ VTYN L+ K +L A + + MKQ
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK-EAFQIVELMKQTN 305
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHA----------- 241
+ TY LI+ LC ++ + ++ M + +P +VTYN LI
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 242 -----------------------YCCRDRVQDAMGIFRGMPD----RGLTPDAVICNTLI 274
+ C++ ++A + R + + G +PD V +TLI
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREA--VTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+ K G+L A EM EM ++GI N T + ++D LC +R+L EA +L G
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
E Y L+ + + KA + DEM + +P++ T+N+LI G C G
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKK--------VKITPTVSTFNSLIGGLCHHG 535
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG--------- 445
+ E A+ +AE L PDD ++N +I G+CK G + KAFE E +
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Query: 446 ---------GIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
G+ L F++L++ D V YN++I+A+C + ++ +A L EME G
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKG 655
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 202/447 (45%), Gaps = 71/447 (15%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGL 137
++L +M +G +P+ TYN L++ YC+ + EA I+ M V P++ ++N +I+GL
Sbjct: 261 ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGL 320
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
C ++E EL+ M S L PD VTYNTLI + L + A L +QM+ +
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE-LGLSLEARKLMEQMENDGVKAN 379
Query: 198 WTTYTSLIHLLCTYN----VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
T+ + LC V + K +M GF P +VTY+ LI AY + A+
Sbjct: 380 QVTHNISLKWLCKEEKREAVTRKVKELVDM--HGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCK-------------------------YGEL----- 283
+ R M +G+ + + NT++ CK YG L
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497
Query: 284 -----EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
EKA EM EM + I P T++ LI LC + A + F E+ GL P +
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS 557
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEE 398
+ +++ YC G KAF +E I F PD T N L+ G C G E+
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN--------YTCNILLNGLCKEGMTEK 609
Query: 399 ALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSL 458
AL + E D V+YN +IS FCK +L +A++L+ EM+E
Sbjct: 610 ALNFFNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEE--------------- 653
Query: 459 MKGLS-DEVNYNSVINAYCAEGEVSKA 484
KGL D YNS I+ +G++S+
Sbjct: 654 -KGLEPDRFTYNSFISLLMEDGKLSET 679
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/576 (24%), Positives = 249/576 (43%), Gaps = 50/576 (8%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCR------DKRVDEAMGILRGMAVEPNVVSFNT 132
A ++ +M+ P++ T N LL R E + + V NV +FN
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 133 VIDGLCAKRRIKEAEELLQEMNSK-GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
+++G C + ++++A +L+ M S+ + PD+VTYNT++ AMSK L L D K
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 192 QRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
+P TY +L++ C ++ +A+++ M + P L TYN LI+ C +++
Sbjct: 270 GLVP-NRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
+ + M L PD V NTLI + G +A ++ +M G+ N T++ +
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 311 CLCPQRRLSEAFDLFREMLG-GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
LC + + +E++ G SP Y L+ AY VG+ S A + EM KG
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI- 447
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+ +T N ++ C +++EA +L + D+V+Y +I GF +
Sbjct: 448 -------KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 430 ELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHD 489
++ KA E+ EM + V +NS+I C G+ A+ D
Sbjct: 501 KVEKALEMWDEMKKVKITPTVS---------------TFNSLIGGLCHHGKTELAMEKFD 545
Query: 490 EMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNN 549
E+ G L + + G+ K+ R A E FY+ +F D N
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFE-----FYNESIK-HSFKPDNYTCNI--- 596
Query: 550 EFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMY 609
L G G+ +A + NT+++ + D YN +I C+ + + +AY++
Sbjct: 597 -------LLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 610 MEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQ 645
EM G F+ + I L G+ +E +++
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 149/299 (49%), Gaps = 40/299 (13%)
Query: 71 CDQLQNDNAYKVLSEMVN-SGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPN 126
C + + + + + E+V+ GF P + TY+ L+ AY + + A+ ++R M ++ N
Sbjct: 391 CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Query: 127 VVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALY 186
++ NT++D LC +R++ EA LL + +G D VTY TLI + V +A+ ++
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK-VEKALEMW 509
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
D+MK+ +I +T+ SLI LC + + A + F E+ SG P T+N +I YC
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKE 569
Query: 246 DRVQDAMGIF------------------------RGMPDRGLT----------PDAVICN 271
RV+ A + GM ++ L D V N
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYN 629
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
T+I+ FCK +L++A+++ +EM E+G+ P+ TY+ I L +LSE +L ++ G
Sbjct: 630 TMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSG 688
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 159/602 (26%), Positives = 261/602 (43%), Gaps = 65/602 (10%)
Query: 35 PKKVTSGGLLKTTTTVSEMNR---------KGLDPARESLIHLLC------CDQLQNDNA 79
P K T LL + +E + KG+ P ++L C + + A
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPD----VYLFTTAINAFCKGGKVEEA 279
Query: 80 YKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDG 136
K+ S+M +G P+V T+N ++ R DEA M +EP +++++ ++ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
L +RI +A +L+EM KG P+ + YN LI + + +L +AI + D M + + +
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN-KAIEIKDLMVSKGLSL 398
Query: 197 PWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
+TY +LI C D A ++ EM++ GF + ++ +I C A+
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
M R ++P + TLI+ CK+G+ KA E+ + + +G + + T + L+ LC
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE 375
+L EAF + +E+LG G +Y L+ C + +AF DEM+ +G PD
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN--- 575
Query: 376 FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF 435
TY+ LI G + +VEEA+ + PD +Y+++I G CK +
Sbjct: 576 -----YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 436 ELMVEMDEAGGIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
E EM + K + + V YN +I AYC G +S AL L ++M+H
Sbjct: 631 EFFDEM----------------MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSV 554
G S Y L G +R AK M + F Y LI+
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALID---------- 723
Query: 555 VELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
G+G G + +L + N P+ Y +I + R NV +A + EM
Sbjct: 724 -----GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 615 YG 616
G
Sbjct: 779 KG 780
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 239/534 (44%), Gaps = 44/534 (8%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTV 133
D A+ +MV G P++ TY++L+ R KR+ +A +L+ M + PNV+ +N +
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
ID + +A E+ M SKGL+ S TYNTLI KN A L +M
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ-ADNAERLLKEMLSIG 430
Query: 194 IPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
V ++TS+I LLC++ + D A + EM+ P LI C + A+
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
++ ++G D N L+ C+ G+L++AF ++ E++ RG + + +Y+ LI
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C +++L EAF EM+ GL P Y Y L+ + + +A D+ G LPD
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD- 609
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
+ TY+ +I G C R EE M ++ P+ V YN +I +C+ G L
Sbjct: 610 -------VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME 492
A EL +M G + A ++SL+KG+ S+I+ V +A +L +EM
Sbjct: 663 MALELREDMKHKG--ISPNSATYTSLIKGM-------SIIS------RVEEAKLLFEEMR 707
Query: 493 HHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFK 552
G Y L DG+ K + E LLR + TY +I
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKV-ECLLREMHSKNVHPNKITYTVMI--------- 757
Query: 553 SVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAY 606
G+ G EA+ +LN + + PD Y I + ++ V +A+
Sbjct: 758 ------GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/587 (24%), Positives = 245/587 (41%), Gaps = 89/587 (15%)
Query: 71 CDQLQNDNAY---KVLSEMVNSGFLPSVATYNVLLHAYCRD---KRVDEAMGILRGMAVE 124
C Q + D Y V + N G PS T N+LL + R ++ EA ++ V
Sbjct: 199 CTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVS 257
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
P+V F T I+ C +++EA +L +M G+AP+ VT+NT+I +
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG----------- 306
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
+C D+A+ +M+ G EP+L+TY+ L+
Sbjct: 307 -----------------------MCG-RYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
R+ DA + + M +G P+ ++ N LI F + G L KA E++ MV +G+ + T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
Y+ LI C + A L +EML G + + ++ +++ C F A EM+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 365 HKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
+ SP LI G C G+ +AL + D + N ++ G
Sbjct: 463 --------LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 425 FCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKA 484
C+ G+L +AF + E+ G + D V+YN++I+ C + ++ +A
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVM---------------DRVSYNTLISGCCGKKKLDEA 559
Query: 485 LILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS---LP-TFTYD 540
+ DEM G + Y +L G + A + F+D C LP +TY
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-----FWDDCKRNGMLPDVYTYS 614
Query: 541 TLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRR 600
+I+ C E E + ++ N +P+ VYN LI +CR
Sbjct: 615 VMIDGCCKAE---------------RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 601 NVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
+ A + +M H G + + + +LIK + + R E + + + +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 209/480 (43%), Gaps = 59/480 (12%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSV 95
+ +G L K M KGL + L+ C Q DNA ++L EM++ GF
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF---- 431
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
NV N SF +VI LC+ A + EM
Sbjct: 432 ---NV-------------------------NQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVD 214
+ ++P TLI+ + K+ +A+ L+ Q + V T +L+H LC +D
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHS-KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
+A+++ E++ G V+YN LI C + ++ +A M RGL PD + LI
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
++E+A + + G+LP+ TYS +ID C R E + F EM+ +
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
P Y +L+ AYC G S A LR++M HKG SP+ TY +LI G ++
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKG--------ISPNSATYTSLIKGMSIIS 694
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAV 454
RVEEA + M L P+ Y +I G+ KLG++ K L+ EM + V
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS----KNVH--- 747
Query: 455 FSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKA 514
+++ Y +I Y +G V++A L +EM G + S+ Y G+ K+
Sbjct: 748 --------PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 191/408 (46%), Gaps = 19/408 (4%)
Query: 50 VSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
+ EM G + + S ++C C L D+A + + EM+ P L+ C+
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 108 DKRVDEAMGIL-----RGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDS 162
+ +A+ + +G V+ + N ++ GLC ++ EA + +E+ +G D
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTR--TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 163 VTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFT 221
V+YNTLI+ L A D+M ++ + TY+ LI L N V++A + +
Sbjct: 541 VSYNTLISGCCGKKKL-DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYG 281
+ +G P + TY+ +I C +R ++ F M + + P+ V+ N LI +C+ G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 282 ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYF 341
L A E+R +M +GI PN+ TY+ LI + R+ EA LF EM GL P + Y
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 342 NLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALG 401
L+ Y +G+ K L EM K P+ +TY +I G G V EA
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKN--------VHPNKITYTVMIGGYARDGNVTEASR 771
Query: 402 ILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
+L M E + PD ++Y I G+ K G + +AF+ E + A I G
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEG 819
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 168/418 (40%), Gaps = 79/418 (18%)
Query: 238 LIHAYCC---RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
LI YC RD A+ +F + ++G+ P CN L+T + E +K
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKC-------- 245
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
EAFD+ + G+SP Y + + A+C G+
Sbjct: 246 ------------------------CEAFDV----VCKGVSPDVYLFTTAINAFCKGGKVE 277
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
+A L +M G +P++VT+N +I G + GR +EA M E + P
Sbjct: 278 EAVKLFSKMEEAGV--------APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 415 DVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINA 474
++Y+I++ G + +G A+ ++ EM + G V + YN++I++
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV---------------IVYNNLIDS 374
Query: 475 YCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSL 534
+ G ++KA+ + D M G S Y L G+ K + A+ L M
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML------- 427
Query: 535 PTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIV 594
++ N + F SV+ L M + A + +L N P G + LI
Sbjct: 428 ------SIGFNVNQGSFTSVICLLCSHLMF---DSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 595 EHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL-RSC 651
C+ KA ++ + ++ GF + AL+ L G+ +E R+ + +L R C
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 159/602 (26%), Positives = 261/602 (43%), Gaps = 65/602 (10%)
Query: 35 PKKVTSGGLLKTTTTVSEMNR---------KGLDPARESLIHLLC------CDQLQNDNA 79
P K T LL + +E + KG+ P ++L C + + A
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPD----VYLFTTAINAFCKGGKVEEA 279
Query: 80 YKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDG 136
K+ S+M +G P+V T+N ++ R DEA M +EP +++++ ++ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
L +RI +A +L+EM KG P+ + YN LI + + +L +AI + D M + + +
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN-KAIEIKDLMVSKGLSL 398
Query: 197 PWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
+TY +LI C D A ++ EM++ GF + ++ +I C A+
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
M R ++P + TLI+ CK+G+ KA E+ + + +G + + T + L+ LC
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE 375
+L EAF + +E+LG G +Y L+ C + +AF DEM+ +G PD
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN--- 575
Query: 376 FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF 435
TY+ LI G + +VEEA+ + PD +Y+++I G CK +
Sbjct: 576 -----YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 436 ELMVEMDEAGGIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
E EM + K + + V YN +I AYC G +S AL L ++M+H
Sbjct: 631 EFFDEM----------------MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSV 554
G S Y L G +R AK M + F Y LI+
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALID---------- 723
Query: 555 VELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
G+G G + +L + N P+ Y +I + R NV +A + EM
Sbjct: 724 -----GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 615 YG 616
G
Sbjct: 779 KG 780
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 239/534 (44%), Gaps = 44/534 (8%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTV 133
D A+ +MV G P++ TY++L+ R KR+ +A +L+ M + PNV+ +N +
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
ID + +A E+ M SKGL+ S TYNTLI KN A L +M
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ-ADNAERLLKEMLSIG 430
Query: 194 IPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
V ++TS+I LLC++ + D A + EM+ P LI C + A+
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
++ ++G D N L+ C+ G+L++AF ++ E++ RG + + +Y+ LI
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C +++L EAF EM+ GL P Y Y L+ + + +A D+ G LPD
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD- 609
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
+ TY+ +I G C R EE M ++ P+ V YN +I +C+ G L
Sbjct: 610 -------VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME 492
A EL +M G + A ++SL+KG+ S+I+ V +A +L +EM
Sbjct: 663 MALELREDMKHKG--ISPNSATYTSLIKGM-------SIIS------RVEEAKLLFEEMR 707
Query: 493 HHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFK 552
G Y L DG+ K + E LLR + TY +I
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKV-ECLLREMHSKNVHPNKITYTVMI--------- 757
Query: 553 SVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAY 606
G+ G EA+ +LN + + PD Y I + ++ V +A+
Sbjct: 758 ------GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/587 (24%), Positives = 245/587 (41%), Gaps = 89/587 (15%)
Query: 71 CDQLQNDNAY---KVLSEMVNSGFLPSVATYNVLLHAYCRD---KRVDEAMGILRGMAVE 124
C Q + D Y V + N G PS T N+LL + R ++ EA ++ V
Sbjct: 199 CTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVS 257
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
P+V F T I+ C +++EA +L +M G+AP+ VT+NT+I +
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG----------- 306
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
+C D+A+ +M+ G EP+L+TY+ L+
Sbjct: 307 -----------------------MCG-RYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
R+ DA + + M +G P+ ++ N LI F + G L KA E++ MV +G+ + T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
Y+ LI C + A L +EML G + + ++ +++ C F A EM+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 365 HKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
+ SP LI G C G+ +AL + D + N ++ G
Sbjct: 463 --------LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 425 FCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKA 484
C+ G+L +AF + E+ G + D V+YN++I+ C + ++ +A
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVM---------------DRVSYNTLISGCCGKKKLDEA 559
Query: 485 LILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS---LP-TFTYD 540
+ DEM G + Y +L G + A + F+D C LP +TY
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-----FWDDCKRNGMLPDVYTYS 614
Query: 541 TLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRR 600
+I+ C E E + ++ N +P+ VYN LI +CR
Sbjct: 615 VMIDGCCKAE---------------RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 601 NVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
+ A + +M H G + + + +LIK + + R E + + + +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 209/480 (43%), Gaps = 59/480 (12%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSV 95
+ +G L K M KGL + L+ C Q DNA ++L EM++ GF
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF---- 431
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
NV N SF +VI LC+ A + EM
Sbjct: 432 ---NV-------------------------NQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVD 214
+ ++P TLI+ + K+ +A+ L+ Q + V T +L+H LC +D
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHS-KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
+A+++ E++ G V+YN LI C + ++ +A M RGL PD + LI
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
++E+A + + G+LP+ TYS +ID C R E + F EM+ +
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
P Y +L+ AYC G S A LR++M HKG SP+ TY +LI G ++
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKG--------ISPNSATYTSLIKGMSIIS 694
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAV 454
RVEEA + M L P+ Y +I G+ KLG++ K L+ EM + V
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS----KNVH--- 747
Query: 455 FSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKA 514
+++ Y +I Y +G V++A L +EM G + S+ Y G+ K+
Sbjct: 748 --------PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 191/408 (46%), Gaps = 19/408 (4%)
Query: 50 VSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
+ EM G + + S ++C C L D+A + + EM+ P L+ C+
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 108 DKRVDEAMGIL-----RGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDS 162
+ +A+ + +G V+ + N ++ GLC ++ EA + +E+ +G D
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTR--TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 163 VTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFT 221
V+YNTLI+ L A D+M ++ + TY+ LI L N V++A + +
Sbjct: 541 VSYNTLISGCCGKKKL-DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYG 281
+ +G P + TY+ +I C +R ++ F M + + P+ V+ N LI +C+ G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 282 ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYF 341
L A E+R +M +GI PN+ TY+ LI + R+ EA LF EM GL P + Y
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 342 NLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALG 401
L+ Y +G+ K L EM K P+ +TY +I G G V EA
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKN--------VHPNKITYTVMIGGYARDGNVTEASR 771
Query: 402 ILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
+L M E + PD ++Y I G+ K G + +AF+ E + A I G
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEG 819
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 168/418 (40%), Gaps = 79/418 (18%)
Query: 238 LIHAYCC---RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
LI YC RD A+ +F + ++G+ P CN L+T + E +K
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKC-------- 245
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
EAFD+ + G+SP Y + + A+C G+
Sbjct: 246 ------------------------CEAFDV----VCKGVSPDVYLFTTAINAFCKGGKVE 277
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
+A L +M G +P++VT+N +I G + GR +EA M E + P
Sbjct: 278 EAVKLFSKMEEAGV--------APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 415 DVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINA 474
++Y+I++ G + +G A+ ++ EM + G V + YN++I++
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNV---------------IVYNNLIDS 374
Query: 475 YCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSL 534
+ G ++KA+ + D M G S Y L G+ K + A+ L M
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML------- 427
Query: 535 PTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIV 594
++ N + F SV+ L M + A + +L N P G + LI
Sbjct: 428 ------SIGFNVNQGSFTSVICLLCSHLMF---DSALRFVGEMLLRNMSPGGGLLTTLIS 478
Query: 595 EHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL-RSC 651
C+ KA ++ + ++ GF + AL+ L G+ +E R+ + +L R C
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 238/521 (45%), Gaps = 76/521 (14%)
Query: 25 AAAAGSLESEPKKVTSGGLLKTTTTVSE-----------MNRKGLDPARESLIHLL--CC 71
A A S S PK VT LLK T + + L+ L LL CC
Sbjct: 108 AIAVISKLSSPKPVTQ--LLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCC 165
Query: 72 DQLQN-DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAM---GILRGMAVEPNV 127
QL+ D A + M GF P T N +L R R++ A + M ++ NV
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
+FN +I+ LC + ++K+A+ L M G+ P VTYNTL+ S + A +
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR-IEGARLIIS 284
Query: 188 QMKQQRIPVPWTTYTSLIHLLC----------------------TYNV-----------D 214
+MK + TY ++ +C +YN+ +
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLE 344
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
A+ EM+ G P+ TYN LIH ++++ A + R + ++G+ D+V N LI
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILI 404
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+C++G+ +KAF + EM+ GI P TY+ LI LC + + EA +LF +++G G+
Sbjct: 405 NGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMK 464
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
P L+ +C +G +AF L EM D ++ +P VTYN L+ G C G
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEM-------DMMS-INPDDVTYNCLMRGLCGEG 516
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAV 454
+ EEA ++ M + PD +SYN +ISG+ K G+ AF + EM G L
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF--NPTLLT 574
Query: 455 FSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
+++L+KGLS EGE+++ L+ EM+ G
Sbjct: 575 YNALLKGLSKN-----------QEGELAEELL--REMKSEG 602
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 208/449 (46%), Gaps = 82/449 (18%)
Query: 53 MNRKGLDPARESLIHLLCCDQLQN--DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR 110
M KG P E+ H+L N +NA+ ++M +V T+N++++ C++ +
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 111 VDEA---MGILRGMAVEPNVVSFNTVIDGLCAKRRIK----------------------- 144
+ +A +GI+ ++P +V++NT++ G + RI+
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 145 ---------EAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
A E+L+EM GL PDSV+YN LI S N +L + A A D+M +Q +
Sbjct: 301 ILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEM-AFAYRDEMVKQGMV 359
Query: 196 VPWTTYTSLIHLL-------------------------CTYNV-----------DKAYKV 219
+ TY +LIH L TYN+ KA+ +
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 220 FTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCK 279
EM+ G +P+ TY LI+ C +++ ++A +F + +G+ PD V+ NTL+ C
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 280 YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYA 339
G +++AF + EM I P+ TY+ L+ LC + + EA +L EM G+ P +
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEA 399
Y L+ Y G+ AF +RDEM+ GF +P+L+TYNAL+ G E A
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGF--------NPTLLTYNALLKGLSKNQEGELA 591
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKL 428
+LR M + P+D S+ VI L
Sbjct: 592 EELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 164/330 (49%), Gaps = 14/330 (4%)
Query: 50 VSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
+SEM KG P ++ +L C++ A +VL EM G +P +YN+L+
Sbjct: 283 ISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSN 339
Query: 108 DKRVDEAMG-----ILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDS 162
+ ++ A + +GM P ++NT+I GL + +I+ AE L++E+ KG+ DS
Sbjct: 340 NGDLEMAFAYRDEMVKQGMV--PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 163 VTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFT 221
VTYN LI ++ + +A AL+D+M I TYTSLI++LC N +A ++F
Sbjct: 398 VTYNILINGYCQHGD-AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYG 281
+++ G +P LV N L+ +C + A + + M + PD V N L+ C G
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 282 ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYF 341
+ E+A E+ EM RGI P+ +Y+ LI + AF + EML G +P Y
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Query: 342 NLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
L+ E A L EM +G +P+
Sbjct: 577 ALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 204/493 (41%), Gaps = 61/493 (12%)
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASG--FEPSLVTYNELI 239
AIA+ ++ + PV T L+ + T + +F E++ + E +L+
Sbjct: 108 AIAVISKLSSPK-PV-----TQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLL 161
Query: 240 HAYCCRDR-VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
CC+ R V +A+ F M ++G P CN ++T + +E A+ A+M I
Sbjct: 162 VRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEI 221
Query: 299 LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
N T++ +I+ LC + +L +A M G+ P Y LV + L G A
Sbjct: 222 KSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARL 281
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
+ EM KGF PD + TYN ++ C GR E +LR M E+ L PD VSY
Sbjct: 282 IISEMKSKGFQPD--------MQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSY 330
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAG-------------------GIRGVDLAVFSSLM 459
NI+I G G+L AF EM + G I ++ +
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 460 KGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRG 518
KG+ D V YN +IN YC G+ KA LHDEM G Y L +K +TR
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 519 AKESLLRMFYDLCTSLPTFTYDTLIE-NCSNNEFKSVVELAKGFG--------------M 563
A E L +TL++ +C+ L K M
Sbjct: 451 ADE-LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 564 RGL-----KNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFA 618
RGL EA ++ + + KPD YN LI + ++ + A+ + EM+ GF
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 619 SHMFSVLALIKAL 631
+ + AL+K L
Sbjct: 570 PTLLTYNALLKGL 582
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATY 98
G + + + + EM+ ++P + L+ C + + + A +++ EM G P +Y
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 99 NVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
N L+ Y + A + + + P ++++N ++ GL + + AEELL+EM S
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 156 KGLAPDSVTYNTLITAMS 173
+G+ P+ ++ ++I AMS
Sbjct: 601 EGIVPNDSSFCSVIEAMS 618
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 198/398 (49%), Gaps = 32/398 (8%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C + D+A +VL M + F P TYN+++ + C ++D A+ +L + +P V
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
+++ +I+ + + EA +L+ EM S+GL PD TYNT+I M K +V RA +
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE-GMVDRAFEMVR 287
Query: 188 QMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
++ + +Y L+ LL ++ K+ T+M + +P++VTY+ LI C
Sbjct: 288 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
++++AM + + M ++GLTPDA + LI FC+ G L+ A E M+ G LP+ Y+
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
++ LC + +A ++F ++ G SP +Y + A G+ +A H+ EM+
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 367 GFLPDFVT---------------------------EFSPSLVTYNALIYGNCLLGRVEEA 399
G PD +T EF PS+VTYN ++ G C R+E+A
Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
+ +L M P++ +Y ++I G G +A EL
Sbjct: 528 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 225/521 (43%), Gaps = 86/521 (16%)
Query: 101 LLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
+ H CR E++ +L M P+V+ +I G R I +A +++ + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKA 216
PD YN LI K N + A + D+M+ + TY +I LC+ +D A
Sbjct: 155 -QPDVFAYNALINGFCK-MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 217 YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
KV ++++ +P+++TY LI A V +A+ + M RGL PD NT+I
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 277 FCKYGELEKAFEM---------RAEMVERGIL--------------------------PN 301
CK G +++AFEM +++ IL PN
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
TYS LI LC ++ EA +L + M GL+P Y+Y L+ A+C G A +
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 362 EMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIV 421
MI G LPD +V YN ++ C G+ ++AL I + E+ SP+ SYN +
Sbjct: 393 TMISDGCLPD--------IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 422 ISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEV 481
S G+ +A +++EM G+D DE+ YNS+I+ C EG V
Sbjct: 445 FSALWSSGDKIRALHMILEMMS----NGID-----------PDEITYNSMISCLCREGMV 489
Query: 482 SKALILHDEM---EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFT 538
+A L +M E H S+ V Y ++ GF K R A L M + C T T
Sbjct: 490 DEAFELLVDMRSCEFHPSV---VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET-T 545
Query: 539 YDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQ 579
Y LIE G G G + EA + N +++
Sbjct: 546 YTVLIE---------------GIGFAGYRAEAMELANDLVR 571
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 172/345 (49%), Gaps = 15/345 (4%)
Query: 41 GGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
GG+ + + EM +GL P ++I +C + + D A++++ + G P V +
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV-DRAFEMVRNLELKGCEPDVIS 300
Query: 98 YNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
YN+LL A + +E ++ M E PNVV+++ +I LC +I+EA LL+ M
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NV 213
KGL PD+ +Y+ LI A + L + AI + M Y +++ LC
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDV-AIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHA-YCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
D+A ++F ++ G P+ +YN + A + D+++ A+ + M G+ PD + N+
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR-ALHMILEMMSNGIDPDEITYNS 478
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
+I+ C+ G +++AFE+ +M P+ TY+ ++ C R+ +A ++ M+G G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
P E Y L+ G ++A L ++++ D ++E+S
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI----DAISEYS 579
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 185/442 (41%), Gaps = 62/442 (14%)
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER 296
++ H C +++ + M +G PD ++C LI F + KA + E++E+
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEK 152
Query: 297 GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
P+ Y+ LI+ C R+ +A + M SP Y ++G+ C G+ A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 357 FHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
+ ++++ P+++TY LI L G V+EAL ++ M L PD
Sbjct: 213 LKVLNQLLSDN--------CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE----------- 465
+YN +I G CK G + +AFE++ ++ G D+ ++ L++ L ++
Sbjct: 265 TYNTIIRGMCKEGMVDRAFEMVRNLELKGC--EPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 466 -----------VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKA 514
V Y+ +I C +G++ +A+ L M+ G + Y L F ++
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 515 RTRGAKESLLRMFYDLCTSLPTF-TYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAAS 572
R A E L M D C LP Y+T++ C N + +E+ G G ++S
Sbjct: 383 RLDVAIEFLETMISDGC--LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Query: 573 VLNTVLQ--WN------------------YKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
NT+ W+ PD YN +I CR VD+A+ + ++M
Sbjct: 441 Y-NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 613 ----VHYGFASHMFSVLALIKA 630
H ++ +L KA
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKA 521
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 154/379 (40%), Gaps = 47/379 (12%)
Query: 278 CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
C+ G ++ + MV +G P+ +KLI R + +A + E+L P
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+AY L+ +C + A + D M K +FSP VTYN +I C G+++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSK--------DFSPDTVTYNIMIGSLCSRGKLD 210
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
AL +L + + P ++Y I+I G + +A +LM EM
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM---------------- 254
Query: 458 LMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKART 516
L +GL D YN++I C EG V +A + +E G + Y +L + +
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
Query: 517 RGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAAS--- 572
++ + +MF + C TY LI C + + + + L K +GL +A S
Sbjct: 315 EEGEKLMTKMFSEKCDP-NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 573 ----------------VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
L T++ PD YN ++ C+ D+A ++ ++ G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 617 FASHMFSVLALIKALFHVG 635
+ + S + AL+ G
Sbjct: 434 CSPNSSSYNTMFSALWSSG 452
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 109/271 (40%), Gaps = 35/271 (12%)
Query: 386 LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+ + +C G E+L +L M +PD + +I GF L + KA +M +++ G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 446 GIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIM 505
D YN++IN +C + A + D M +V Y +
Sbjct: 155 Q----------------PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 506 LFDGFDKKARTRGAKESLLRMFYDLCTSLPT-FTYDTLIENCSNNEFKSVVELAKGFGMR 564
+ + + A + L ++ D C PT TY LIE +
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQ--PTVITYTILIE---------------ATMLE 241
Query: 565 GLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSV 624
G +EA +++ +L KPD YN +I C+ VD+A+ M + G + S
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 625 LALIKALFHVGRHNEVRRVIQNVL-RSCNIN 654
L++AL + G+ E +++ + C+ N
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 166/622 (26%), Positives = 278/622 (44%), Gaps = 57/622 (9%)
Query: 63 ESLIHLLCCD-QLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM 121
E+ + LC D Q NA V + V+SG + A N L+ R + + A R M
Sbjct: 40 ETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNN-LMAKLVRSRNHELAFSFYRKM 98
Query: 122 AVEP---NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL 178
N VS + +++ R+ A +L M +G A + +N L+ + +N
Sbjct: 99 LETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLE- 157
Query: 179 VIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT-YNVDKAYKVFTEMIASGFEPSLVTYNE 237
+A++L +M++ + +Y ++I C ++KA ++ EM SG SLVT+
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 238 LIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG 297
LI A+C ++ +AMG + M GL D V+ +LI FC GEL++ + E++ERG
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 298 ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAF 357
P A TY+ LI C +L EA ++F M+ G+ P Y Y L+ C VG+ +A
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 358 HLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVS 417
L + MI K + P+ VTYN +I C G V +A+ I+ M + PD+++
Sbjct: 338 QLLNLMIEK--------DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 418 YNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL--------------- 462
YNI++ G C G+L +A +L+ M + D+ +++L+ GL
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 463 -------SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKAR 515
D V N ++N+ G+V+KA+ L ++ +R S Y + DGF K
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 516 TRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLN 575
AK L +M + L +D NC L G ++A +
Sbjct: 510 LNVAKGLLCKM---RVSELQPSVFDY---NC----------LLSSLCKEGSLDQAWRLFE 553
Query: 576 TVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVG 635
+ + N PD +N +I + ++ A ++ + M G + +F+ LI +G
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613
Query: 636 RHNEVRRVIQNVLRSCNINGFE 657
+E ++ S GFE
Sbjct: 614 YLDEAISFFDKMVDS----GFE 631
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 156/326 (47%), Gaps = 12/326 (3%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA-- 122
+I+ LC D L D A +++ M P TYN+LL C +DEA +L M
Sbjct: 358 IINKLCKDGLVAD-AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 123 ---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLV 179
+P+V+S+N +I GLC + R+ +A ++ + K A D VT N L+ + K + V
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD-V 475
Query: 180 IRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNEL 238
+A+ L+ Q+ +I TYT++I C T ++ A + +M S +PS+ YN L
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535
Query: 239 IHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
+ + C + A +F M PD V N +I K G+++ A + M G+
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 299 LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLV-GEFSKAF 357
P+ TYSKLI+ L EA F +M+ G P + + V YC+ GE K
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH-ICDSVLKYCISQGETDKLT 654
Query: 358 HLRDEMIHKGFLPDFVTEFSPSLVTY 383
L +++ K + D E + +++ Y
Sbjct: 655 ELVKKLVDKDIVLD--KELTCTVMDY 678
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 213/512 (41%), Gaps = 63/512 (12%)
Query: 167 TLITAMSKNTNLVIR-AIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIA 225
T + ++ +++N ++ A++++ Q + + + L+ + N + A+ + +M+
Sbjct: 41 TKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLE 100
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
+ + V+ + L+ Y + A G+ M RG + N L+ C+ E K
Sbjct: 101 TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK 160
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
A + EM ++P+ +Y+ +I C + L +A +L EM G G S + L+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
A+C G+ +A EM G D LV Y +LI G C G ++ +
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEAD--------LVVYTSLIRGFCDCGELDRGKALFDE 272
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKA---FELMVEMDEAGGIRGVDLAVFSSLMKGL 462
+ E SP ++YN +I GFCKLG+L +A FE M+E RGV V++
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE-------RGVRPNVYT------ 319
Query: 463 SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKES 522
Y +I+ C G+ +AL L + M +V Y ++ + K A E
Sbjct: 320 -----YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE- 373
Query: 523 LLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWN- 581
++ + T TY+ L+ G +G +EA+ +L +L+ +
Sbjct: 374 IVELMKKRRTRPDNITYNILL---------------GGLCAKGDLDEASKLLYLMLKDSS 418
Query: 582 -YKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEV 640
PD YN LI C+ + +A ++Y +V A + L+ + G N+
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK- 477
Query: 641 RRVIQNVLRSCNINGFELHKALSETGVIVRED 672
EL K +S++ ++ D
Sbjct: 478 --------------AMELWKQISDSKIVRNSD 495
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 194/386 (50%), Gaps = 16/386 (4%)
Query: 65 LIHLLC-CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRG 120
L++ C C QL A L +M+ G PS+ T+ LL+ +CR RV +A+ + + G
Sbjct: 122 LLNCFCRCSQLSL--ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 121 MAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
M +PNVV +NT+IDGLC +++ A +LL M G+ PD VTYN+LI+ + +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS- 238
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELI 239
A + M ++ I T+ +LI V +A + + EMI +P +VTY+ LI
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL 299
+ C R+ +A +F M +G PD V + LI +CK ++E ++ EM +RG++
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
N TY+ LI C +L+ A ++FR M+ G+ P Y L+ C G+ KA +
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+M G D +VTYN +I G C G V +A I + L PD +Y
Sbjct: 419 LADMQKNGMDAD--------IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470
Query: 420 IVISGFCKLGELGKAFELMVEMDEAG 445
++ G K G +A L +M E G
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKEDG 496
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 196/385 (50%), Gaps = 15/385 (3%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLC 138
+ +M G ++ T N+LL+ +CR ++ A+ L M EP++V+F ++++G C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW 198
R+ +A + +M G P+ V YNT+I + K+ V A+ L ++M++ I
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ-VDNALDLLNRMEKDGIGPDV 221
Query: 199 TTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRG 257
TY SLI LC+ A ++ + M P + T+N LI A RV +A +
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
M R L PD V + LI C Y L++A EM MV +G P+ TYS LI+ C ++
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 318 LSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
+ LF EM G+ Y L+ YC G+ + A + M+ G
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV--------H 393
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P+++TYN L++G C G++E+AL IL M + + D V+YNI+I G CK GE+ A+++
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGL 462
++ G + D+ ++++M GL
Sbjct: 454 YCSLNCQGLMP--DIWTYTTMMLGL 476
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 201/457 (43%), Gaps = 28/457 (6%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D++ + MV LPS+A ++ LL A + K+ D + + M + N+ + N +
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
++ C ++ A L +M G P VT+ +L+ + + V A+ ++DQM
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG-DRVYDALYMFDQMVGMG 181
Query: 194 IPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
Y ++I LC + VD A + M G P +VTYN LI C R DA
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M R + PD N LI K G + +A E EM+ R + P+ TYS LI L
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C RL EA ++F M+ G P Y L+ YC + L EM +G + +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN- 360
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
VTY LI G C G++ A I R M + P+ ++YN+++ G C G++
Sbjct: 361 -------TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME 492
KA ++ +M + G+D +D V YN +I C GEV+ A ++ +
Sbjct: 414 KALVILADMQK----NGMD-----------ADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 493 HHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYD 529
G + Y + G KK R A +M D
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 191/464 (41%), Gaps = 50/464 (10%)
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKV----FTEMIASGFEPSLVTYNE 237
++ L+ M Q R P+P + LL + K Y V + +M G +L T N
Sbjct: 65 SLDLFFHMVQCR-PLP--SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 238 LIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG 297
L++ +C ++ A+ M G P V +L+ FC+ + A M +MV G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 298 ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAF 357
PN Y+ +ID LC +++ A DL M G+ P Y +L+ C G +S A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 358 HLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVS 417
+ M + E P + T+NALI GRV EA M SL PD V+
Sbjct: 242 RMVSCMTKR--------EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 418 YNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCA 477
Y+++I G C L +A E+ M G D V Y+ +IN YC
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGC---------------FPDVVTYSILINGYCK 338
Query: 478 EGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPT- 536
+V + L EM G +R +V Y +L G+ + + A+E RM + C P
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF--CGVHPNI 396
Query: 537 FTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWN-YKPDGAVYNFLIVE 595
TY+ L+ +N K E A V+ +Q N D YN +I
Sbjct: 397 ITYNVLLHGLCDNG----------------KIEKALVILADMQKNGMDADIVTYNIIIRG 440
Query: 596 HCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNE 639
C+ V A+++Y + G +++ ++ L+ G E
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRRE 484
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 193/380 (50%), Gaps = 13/380 (3%)
Query: 70 CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPN 126
CC+ + + ++ +L E+ GF P+V Y L+ C+ +++A + M + N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 127 VVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALY 186
++ +I+GL K+ E+ ++M G+ P+ TYN ++ + K+ A ++
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR-TKDAFQVF 291
Query: 187 DQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
D+M+++ + TY +LI LC +++A KV +M + G P+L+TYN LI +C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
++ A+ + R + RGL+P V N L++ FC+ G+ A +M EM ERGI P+ TY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+ LID + +A L M GL P + Y L+ +C+ G+ ++A L M+
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
K P+ V YN +I G C G AL +L+ M E L+P+ SY +I
Sbjct: 472 KN--------CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 426 CKLGELGKAFELMVEMDEAG 445
CK + +A L+ +M ++G
Sbjct: 524 CKERKSKEAERLVEKMIDSG 543
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 199/414 (48%), Gaps = 27/414 (6%)
Query: 83 LSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR--GMAVEPNVVSFNTVIDGLCAK 140
+EMV++GF+P +N LL ++ V +V SF +I G C
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEA 176
Query: 141 RRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT 200
I+++ +LL E+ G +P+ V Y TLI K + +A L+ +M + + T
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFEMGKLGLVANERT 235
Query: 201 YTSLIHLLCTYNVDK-AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
YT LI+ L V K ++++ +M G P+L TYN +++ C R +DA +F M
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
+RG++ + V NTLI C+ +L +A ++ +M GI PN TY+ LID C +L
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
+A L R++ GLSP Y LV +C G+ S A + EM +G PS
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG--------IKPS 407
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
VTY LI +E+A+ + M E+ L PD +Y+++I GFC G++ +A L
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 440 EMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
M E +EV YN++I YC EG +AL L EME
Sbjct: 468 SMVEKN---------------CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 206/419 (49%), Gaps = 43/419 (10%)
Query: 234 TYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM 293
++ LI C ++ + + + + G +P+ VI TLI CK GE+EKA ++ EM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 294 VERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEF 353
+ G++ N TY+ LI+ L + F+++ +M G+ P Y Y ++ C G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 354 SKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP 413
AF + DEM +G S ++VTYN LI G C ++ EA ++ M ++P
Sbjct: 285 KDAFQVFDEMRERG--------VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 414 DDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVIN 473
+ ++YN +I GFC +G+LGKA L ++ RG+ ++ V YN +++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKS----RGLSPSL-----------VTYNILVS 381
Query: 474 AYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESL-LRMFYDLCT 532
+C +G+ S A + EME G + V Y +L D F AR+ ++++ LR+ +
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF---ARSDNMEKAIQLRLSMEELG 438
Query: 533 SLP-TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNF 591
+P TY LI GF ++G NEA+ + ++++ N +P+ +YN
Sbjct: 439 LVPDVHTYSVLIH---------------GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 592 LIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
+I+ +C+ + +A + EM A ++ S +I+ L + E R+++ ++ S
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 155/275 (56%), Gaps = 6/275 (2%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM--- 121
+++ LC D D A++V EM G ++ TYN L+ CR+ +++EA ++ M
Sbjct: 274 VMNQLCKDGRTKD-AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
+ PN++++NT+IDG C ++ +A L +++ S+GL+P VTYN L++ + +
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD-TSG 391
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIH 240
A + +M+++ I TYT LI + N++KA ++ M G P + TY+ LIH
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
+C + ++ +A +F+ M ++ P+ VI NT+I +CK G +A ++ EM E+ + P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSP 335
N +Y +I+ LC +R+ EA L +M+ G+ P
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 127/240 (52%), Gaps = 5/240 (2%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C +++ + A KV+ +M + G P++ TYN L+ +C ++ +A+ + R + + P++
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V++N ++ G C K A ++++EM +G+ P VTY LI +++ N+ +AI L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME-KAIQLRL 432
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
M++ + TY+ LIH C +++A ++F M+ EP+ V YN +I YC
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
A+ + + M ++ L P+ +I CK + ++A + +M++ GI P+ S
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 156/552 (28%), Positives = 250/552 (45%), Gaps = 55/552 (9%)
Query: 10 RHIVRNSGMTRGFTAAAAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARESLIHLL 69
+ V S + RG AA S ++ SG KT+ E+ R GL
Sbjct: 10 KRFVHRSLVVRG-NAATFPLSFSFCRRRAFSG---KTSYDYREVLRTGLS---------- 55
Query: 70 CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVD------EAMGILRGMAV 123
++ D+A + M S PS+ ++ LL A + + D E M IL +
Sbjct: 56 ---DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEIL---GI 109
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
N+ ++N +I+ C R+ A LL +M G PD VT N+L+ + N + A+
Sbjct: 110 SHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC-HGNRISDAV 168
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAY 242
AL DQM + T+T+LIH L +N +A + M+ G +P LVTY +++
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Query: 243 CCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNA 302
C R A+ + M + + VI +T+I CKY + A + EM +G+ PN
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
TYS LI CLC R S+A L +M+ ++P + L+ A+ G+ KA L +E
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 363 MIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
MI + P++ TY++LI G C+L R+ EA +L M P+ V+YN +I
Sbjct: 349 MIKR--------SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 423 SGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVS 482
+GFCK + K EL EM + G + + V Y ++I+ + +
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLV---------------GNTVTYTTLIHGFFQARDCD 445
Query: 483 KALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP-TFTYDT 541
A ++ +M G + Y +L DG K + AK ++ + T P +TY+
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL--AKAMVVFEYLQRSTMEPDIYTYNI 503
Query: 542 LIEN-CSNNEFK 552
+IE C ++K
Sbjct: 504 MIEGMCKAGKWK 515
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 178/436 (40%), Gaps = 39/436 (8%)
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+D A +F M S PS++ +++L+ A ++ + M G++ + N
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
LI FC+ L A + +M++ G P+ T + L++ C R+S+A L +M+ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
P + L+ L + S+A L D M+ +G PD LVTY A++ G C
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPD--------LVTYGAVVNGLCK 230
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
G + AL +L M + + V Y+ VI CK A L EM E G+R
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVR---- 285
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
+ + Y+S+I+ C G S A L +M V + L D F K
Sbjct: 286 ----------PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Query: 513 KARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAAS 572
K + A E L FTY +LI GF M EA
Sbjct: 336 KGKLVKA-EKLYEEMIKRSIDPNIFTYSSLIN---------------GFCMLDRLGEAKQ 379
Query: 573 VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALF 632
+L +++ + P+ YN LI C+ + VDK ++ EM G + + LI F
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Query: 633 HVGRHNEVRRVIQNVL 648
+ + V + ++
Sbjct: 440 QARDCDNAQMVFKQMV 455
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 210/409 (51%), Gaps = 20/409 (4%)
Query: 47 TTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLH 103
++ + +M + G +P SLI+ C + + A ++++MV G P V Y ++
Sbjct: 127 SSFLGKMMKLGFEPDIVTFTSLINGFCLGN-RMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 104 AYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAP 160
+ C++ V+ A+ + M + P+VV + ++++GLC R ++A+ LL+ M + + P
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 161 DSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKV 219
D +T+N LI A K + A LY++M + I TYTSLI+ C VD+A ++
Sbjct: 246 DVITFNALIDAFVKEGKF-LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 220 FTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCK 279
F M G P +V Y LI+ +C +V DAM IF M +GLT + + TLI F +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 280 YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG---GGLSPR 336
G+ A E+ + MV RG+ PN TY+ L+ CLC ++ +A +F +M G++P
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
+ Y L+ C G+ KA + ++M + E ++TY +I G C G+V
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKR--------EMDIGIITYTIIIQGMCKAGKV 476
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+ A+ + + + P+ V+Y +ISG + G +A L +M E G
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 198/423 (46%), Gaps = 27/423 (6%)
Query: 74 LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSF 130
LQ + A + + MV S LPS+ + LL+ + K+ D + + L+ M V ++ +
Sbjct: 51 LQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
N +++ C + A L +M G PD VT+ +LI N + A+++ +QM
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG-NRMEEAMSMVNQMV 169
Query: 191 QQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
+ I YT++I LC +V+ A +F +M G P +V Y L++ C R +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
DA + RGM R + PD + N LI F K G+ A E+ EM+ I PN TY+ LI
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
+ C + + EA +F M G P AY +L+ +C + A + EM KG
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG-- 347
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+ + +TY LI G +G+ A + M + P+ +YN+++ C G
Sbjct: 348 ------LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 430 ELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEV-NYNSVINAYCAEGEVSKALILH 488
++ KA + +M + M G++ + YN +++ C G++ KAL++
Sbjct: 402 KVKKALMIFEDMQKRE-------------MDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Query: 489 DEM 491
++M
Sbjct: 449 EDM 451
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 215/427 (50%), Gaps = 38/427 (8%)
Query: 97 TYNVLLHAYCRDKR---VDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
T N+L++ +C+ + +G + + EP++V+F ++I+G C R++EA ++ +M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV 213
G+ PD V Y T+I ++ KN + V A++L+DQM+ I YTSL++ LC
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGH-VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 214 DK-AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+ A + M +P ++T+N LI A+ + DA ++ M + P+ +
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
LI FC G +++A +M M +G P+ Y+ LI+ C +++ +A +F EM G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
L+ Y L+ + VG+ + A + M+ +G P++ TYN L++ C
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG--------VPPNIRTYNVLLHCLCY 399
Query: 393 LGRVEEALGILRGMAEMSL---SPDDVSYNIVISGFCKLGELGKA---FELM--VEMD-- 442
G+V++AL I M + + +P+ +YN+++ G C G+L KA FE M EMD
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 443 ------------EAGGIRGVDLAVFSSL-MKGLS-DEVNYNSVINAYCAEGEVSKALILH 488
+AG ++ + +F SL KG+ + V Y ++I+ EG +A +L
Sbjct: 460 IITYTIIIQGMCKAGKVKNA-VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 489 DEMEHHG 495
+M+ G
Sbjct: 519 RKMKEDG 525
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 174/374 (46%), Gaps = 34/374 (9%)
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
+ EA +L M P + + L+ ++K + I L D + Q + V Y
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV-VINLCDHL--QIMGVSHDLY 108
Query: 202 TSLIHLLCTYNVDKAY---KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
T + + C + Y +M+ GFEP +VT+ LI+ +C +R+++AM + M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRL 318
+ G+ PD V+ T+I CK G + A + +M GI P+ Y+ L++ LC R
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 319 SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSP 378
+A L R M + P + L+ A+ G+F A L +EMI +P
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR--------MSIAP 280
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
++ TY +LI G C+ G V+EA + M PD V+Y +I+GFCK ++ A ++
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 439 VEMDEAG------------------GIRGVDLAVFSSLM-KGLSDEV-NYNSVINAYCAE 478
EM + G G V VFS ++ +G+ + YN +++ C
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 479 GEVSKALILHDEME 492
G+V KAL++ ++M+
Sbjct: 401 GKVKKALMIFEDMQ 414
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 139/265 (52%), Gaps = 10/265 (3%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVI 134
+A ++ +EM+ P++ TY L++ +C + VDEA + M + P+VV++ ++I
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+G C +++ +A ++ EM+ KGL +++TY TLI + + A ++ M + +
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV-AQEVFSHMVSRGV 383
Query: 195 PVPWTTYTSLIHLLCTYN--VDKAYKVFTEMIA---SGFEPSLVTYNELIHAYCCRDRVQ 249
P TY L+H LC YN V KA +F +M G P++ TYN L+H C +++
Sbjct: 384 PPNIRTYNVLLHCLC-YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
A+ +F M R + + +I CK G+++ A + + +G+ PN TY+ +I
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLS 334
L + EA LFR+M G+S
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 180/450 (40%), Gaps = 67/450 (14%)
Query: 231 SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMR 290
+ Y E++ + +A+ +F M + P + L+ K + + +
Sbjct: 36 AFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLC 95
Query: 291 AEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLV 350
+ G+ + T + L++C C + A +M+ G P + +L+ +CL
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155
Query: 351 GEFSKAFHLRDEMIHKGFLPDFVTEFS---------------------------PSLVTY 383
+A + ++M+ G PD V + P +V Y
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 384 NALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE 443
+L+ G C GR +A +LRGM + + PD +++N +I F K G+ A EL EM
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM-- 273
Query: 444 AGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLY 503
IR M + Y S+IN +C EG V +A + ME G V Y
Sbjct: 274 ---IR----------MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 504 IMLFDGFDKKARTRGAKESLLRMFYDLCT---SLPTFTYDTLIENCSNNEFKSVVELAKG 560
L +GF K + A +++FY++ + T TY TLI+ G
Sbjct: 321 TSLINGFCKCKKVDDA----MKIFYEMSQKGLTGNTITYTTLIQ---------------G 361
Query: 561 FGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHY---GF 617
FG G N A V + ++ P+ YN L+ C V KA ++ +M G
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 618 ASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
A ++++ L+ L + G+ + V +++
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 179/461 (38%), Gaps = 81/461 (17%)
Query: 285 KAFEMRAEMVERGILPNADTYSKLID------CLCPQR----------RLSEAFDLFREM 328
+ F++ + +G A ++S+L+D C R + +EA DLF M
Sbjct: 4 RFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHM 63
Query: 329 LGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIY 388
+ P + L+ + +F +L D + G S L T N L+
Sbjct: 64 VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGV--------SHDLYTCNLLMN 115
Query: 389 GNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIR 448
C + A L M ++ PD V++ +I+GFC + +A ++ +M E G I+
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG-IK 174
Query: 449 GVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFD 508
D V Y ++I++ C G V+ AL L D+ME++G V+Y L +
Sbjct: 175 --------------PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 509 GFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE---------------------NCS 547
G R R A +SLLR T++ LI+ + +
Sbjct: 221 GLCNSGRWRDA-DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 548 NNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYN 607
N F + L GF M G +EA + + PD Y LI C+ + VD A
Sbjct: 280 PNIF-TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 608 MYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQ--------------NVLRSCNI 653
++ EM G + + LI+ VG+ N + V NVL C
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 654 NGFELHKALSETGVIVREDKVKDVLLNVLAEIAMDGLLLNG 694
++ KAL ++ ED K + V I +LL+G
Sbjct: 399 YNGKVKKAL-----MIFEDMQKREMDGVAPNIWTYNVLLHG 434
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/627 (24%), Positives = 257/627 (40%), Gaps = 99/627 (15%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFN 131
+D + +M G+ P+V + L+ + ++ RVD A+ +L M +++ ++V +N
Sbjct: 183 HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN 242
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM-K 190
ID ++ A + E+ + GL PD VTY ++I + K N + A+ +++ + K
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK-ANRLDEAVEMFEHLEK 301
Query: 191 QQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
+R+P + T ++ D+AY + A G PS++ YN ++ +V +
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
A+ +F M + P+ N LI C+ G+L+ AFE+R M + G+ PN T + ++D
Sbjct: 362 ALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAF------------- 357
LC ++L EA +F EM +P E + +L+ VG A+
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 358 --------------HLRDE--------MIHKGFLPDF----------------------- 372
H R E MI++ PD
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 373 ----VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
F P +Y+ LI+G G E + M E D +YNIVI GFCK
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 429 GELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILH 488
G++ KA++L+ EM +G + V V Y SVI+ + +A +L
Sbjct: 601 GKVNKAYQLLEEMK----TKGFEPTV-----------VTYGSVIDGLAKIDRLDEAYMLF 645
Query: 489 DEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSN 548
+E + V+Y L DGF K R A L + T +T+++L++
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP-NLYTWNSLLDALVK 704
Query: 549 NEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNM 608
E E+ NEA ++ + P+ Y LI C+ R +KA+
Sbjct: 705 AE-----EI----------NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 609 YMEMVHYGFASHMFSVLALIKALFHVG 635
+ EM G S +I L G
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAG 776
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 228/495 (46%), Gaps = 33/495 (6%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE--PNVVSFNTVI 134
D AY +L G +PSV YN +L + +VDEA+ + M + PN+ ++N +I
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILI 384
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
D LC ++ A EL M GL P+ T N ++ + K+ L A A++++M +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL-DEACAMFEEMDYKVC 443
Query: 195 PVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
T+ SLI L VD AYKV+ +M+ S + + Y LI + R +D
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
I++ M ++ +PD + NT + K GE EK M E+ R +P+A +YS LI L
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
+E ++LF M G AY ++ +C G+ +KA+ L +EM KG
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG------ 617
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
F P++VTY ++I G + R++EA + + + V Y+ +I GF K+G + +
Sbjct: 618 --FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 434 AFELMVEMDEAGGIRGV------------------DLAVFSSL--MKGLSDEVNYNSVIN 473
A+ ++ E+ + G + L F S+ +K ++V Y +IN
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 474 AYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS 533
C + +KA + EM+ G +++ Y + G K A +L F
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG-ALFDRFKANGGV 794
Query: 534 LPTFTYDTLIENCSN 548
+ Y+ +IE SN
Sbjct: 795 PDSACYNAMIEGLSN 809
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/595 (24%), Positives = 253/595 (42%), Gaps = 64/595 (10%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
S+N+++ + R +++L EM+ G P T ++ K N + +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVK-ANKLREGYDVVQM 158
Query: 189 MKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
M++ + ++ YT+LI N D +F +M G+EP++ + LI + R
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
V A+ + M L D V+ N I F K G+++ A++ E+ G+ P+ TY+
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
+I LC RL EA ++F + P YAY ++ Y G+F +A+ L + KG
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCL--LGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
+ PS++ YN ++ CL +G+V+EAL + M + +P+ +YNI+I
Sbjct: 339 SI--------PSVIAYNCIL--TCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDML 387
Query: 426 CKLGELGKAFELMVEMDEAG---GIRGVDL---------------AVFSSLMKGL--SDE 465
C+ G+L AFEL M +AG +R V++ A+F + + DE
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 466 VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLR 525
+ + S+I+ G V A ++++M S++Y L F R +
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 526 MFYDLCT---SLPTFTYDTLIENCSNNEFKSVVE----------------LAKGFGMRGL 566
M C+ L D + + + +++ E L G G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 567 KNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLA 626
NE + ++ + D YN +I C+ V+KAY + EM GF + + +
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 627 LIKALFHVGRHNEV---------RRVIQN-VLRSCNINGFELHKALSETGVIVRE 671
+I L + R +E +R+ N V+ S I+GF + E +I+ E
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 171/373 (45%), Gaps = 13/373 (3%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTV 133
D+AYKV +M++S + Y L+ + R ++ I + M + P++ NT
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+D + ++ + +E+ ++ PD+ +Y+ LI + K L+ MK+Q
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK-AGFANETYELFYSMKEQG 582
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ Y +I C V+KAY++ EM GFEP++VTY +I DR+ +A
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+F + + + VI ++LI F K G +++A+ + E++++G+ PN T++ L+D L
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
++EA F+ M +P + Y L+ C V +F+KAF EM +G
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG----- 757
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
PS ++Y +I G G + EA + PD YN +I G
Sbjct: 758 ---MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 433 KAFELMVEMDEAG 445
AF L E G
Sbjct: 815 DAFSLFEETRRRG 827
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 5/249 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL---RGMAVEPNVVSFNTV 133
+ AY++L EM GF P+V TY ++ + R+DEA + + +E NVV ++++
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
IDG RI EA +L+E+ KGL P+ T+N+L+ A+ K + A+ + MK+ +
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE-INEALVCFQSMKELK 722
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
TY LI+ LC +KA+ + EM G +PS ++Y +I + +A
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+F G PD+ N +I AF + E RG+ + T L+D L
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Query: 313 CPQRRLSEA 321
L +A
Sbjct: 843 HKNDCLEQA 851
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 117/265 (44%), Gaps = 11/265 (4%)
Query: 41 GGLLKTTTTVSEMNRKGLDPA---RESLIHLLC-CDQLQNDNAYKVLSEMVNSGFLPSVA 96
G + K + EM KG +P S+I L D+L D AY + E + +V
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL--DEAYMLFEEAKSKRIELNVV 658
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
Y+ L+ + + R+DEA IL + + PN+ ++N+++D L I EA Q M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-N 212
P+ VTY LI + K +A + +M++Q + +YT++I L N
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFN-KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+ +A +F A+G P YN +I +R DA +F RGL C
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVV 837
Query: 273 LITFFCKYGELEKAFEMRAEMVERG 297
L+ K LE+A + A + E G
Sbjct: 838 LLDTLHKNDCLEQAAIVGAVLRETG 862
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 210/461 (45%), Gaps = 47/461 (10%)
Query: 74 LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSF 130
LQ ++A + + MV+S LPS+ + LL + R D + + M + P + +
Sbjct: 62 LQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC 121
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
N V+ +C + A L +M G PD VT+ +L+ + N + AIAL+DQ+
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC-HWNRIEDAIALFDQIL 180
Query: 191 QQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
TYT+LI LC +++ A ++F +M +G P++VTYN L+ C R
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
DA + R M R + P+ + LI F K G+L +A E+ M++ + P+ TY LI
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
+ LC L EA +F M G P E Y L+ +C + EM KG +
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 370 ------------------PDFVTEF---------SPSLVTYNALIYGNCLLGRVEEALGI 402
PD E P + TYN L+ G C G+VE+AL I
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
M + + + V+Y I+I G CKLG++ AF+L ++FS MK
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC-------------SLFSKGMK-- 465
Query: 463 SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLY 503
+ + Y ++I+ +C G + +A L +M+ G L +Y
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 190/385 (49%), Gaps = 14/385 (3%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGM 121
++H +C Q A L +M+ GF P + T+ LL+ YC R+++A+ + + GM
Sbjct: 124 VMHCVCLSS-QPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
+PNVV++ T+I LC R + A EL +M + G P+ VTYN L+T + +
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIH 240
A L D MK +RI T+T+LI + +A +++ MI P + TY LI+
Sbjct: 243 AWLLRDMMK-RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
C + +A +F M G P+ VI TLI FCK +E ++ EM ++G++
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
N TY+ LI C R A ++F +M P Y L+ C G+ KA +
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
+ M + E ++VTY +I G C LG+VE+A + + + P+ ++Y
Sbjct: 422 EYMRKR--------EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 421 VISGFCKLGELGKAFELMVEMDEAG 445
+ISGFC+ G + +A L +M E G
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDG 498
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 208/471 (44%), Gaps = 50/471 (10%)
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
+ +A +L M P + + L++ ++K N I+L++QM+ IP T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAK-MNRYDVVISLFEQMQILGIPPLLCTC 121
Query: 202 TSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
++H +C + +A +M+ GFEP LVT+ L++ YC +R++DA+ +F +
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
G P+ V TLI CK L A E+ +M G PN TY+ L+ LC R +
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A L R+M+ + P + L+ A+ VG+ +A L + MI PD +
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD--------V 293
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
TY +LI G C+ G ++EA + M P++V Y +I GFCK + ++ E
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 441 MDEAGGIRGVDLAVFSSLMKG--------LSDEV--------------NYNSVINAYCAE 478
M + G + + ++ L++G ++ EV YN +++ C
Sbjct: 354 MSQKGVV--ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 479 GEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFT 538
G+V KAL++ + M V Y ++ G K + A + +F T
Sbjct: 412 GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GMKPNVIT 470
Query: 539 YDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVY 589
Y T+I GF RGL +EA S+ + + + P+ +VY
Sbjct: 471 YTTMIS---------------GFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 186/426 (43%), Gaps = 45/426 (10%)
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
+ A +FT M+ S PS++ + L+ +R + +F M G+ P CN +
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
+ C + +A +M++ G P+ T++ L++ C R+ +A LF ++LG G
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
P Y L+ C + A L ++M G P++VTYNAL+ G C +
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS--------RPNVVTYNALVTGLCEI 236
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA 453
GR +A +LR M + + P+ +++ +I F K+G+L +A EL M + ++
Sbjct: 237 GRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM--------IQMS 288
Query: 454 VFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
V+ D Y S+IN C G + +A + ME +G V+Y L GF K
Sbjct: 289 VYP-------DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 514 ARTRGAKESLLRMFYDLCTS---LPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEA 570
R E +++FY++ T TY LI+ G+ + G + A
Sbjct: 342 KRV----EDGMKIFYEMSQKGVVANTITYTVLIQ---------------GYCLVGRPDVA 382
Query: 571 ASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKA 630
V N + PD YN L+ C V+KA ++ M ++ + +I+
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 631 LFHVGR 636
+ +G+
Sbjct: 443 MCKLGK 448
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGM 121
L+ LCC+ + + A + M ++ TY +++ C+ +V++A + L
Sbjct: 404 LLDGLCCNG-KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTY 165
++PNV+++ T+I G C + I EA+ L ++M G P+ Y
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 206/446 (46%), Gaps = 60/446 (13%)
Query: 34 EPKKVTSGGLLKT------TTTVSEMNRK------GLDPARESLIHLLCCDQLQNDNAYK 81
+P +VT G +LK T E+ RK LD + S+I C DNA+
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLC 138
+ +EM GF + Y L+ +C R D+ +LR M + P+VV+F+ +ID
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW 198
+ +++EAEEL +EM +G++PD+VTY +LI K L
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL-------------------- 368
Query: 199 TTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
DKA + M++ G P++ T+N LI+ YC + + D + +FR M
Sbjct: 369 ---------------DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRL 318
RG+ D V NTLI FC+ G+LE A E+ EMV R + P+ +Y L+D LC
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 319 SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSP 378
+A ++F ++ + Y ++ C + A+ L + KG PD
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD------- 526
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
+ TYN +I G C G + EA + R M E SP+ +YNI+I G+ K+ +L+
Sbjct: 527 -VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 439 VEMDEAGGIRGVDLAVFSSLMKGLSD 464
E+ G VD + ++ LSD
Sbjct: 586 EEIKRCG--FSVDASTVKMVVDMLSD 609
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 149/606 (24%), Positives = 255/606 (42%), Gaps = 94/606 (15%)
Query: 73 QLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVS 129
++ D+A + EM S P + ++ L R K+ D + + + M + N+ +
Sbjct: 50 DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
+ +I+ C R++ A + ++ G PD+VT++TLI
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING------------------ 151
Query: 190 KQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
L V +A ++ M+ G +P+L+T N L++ C +V
Sbjct: 152 -----------------LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
DA+ + M + G P+ V ++ CK G+ A E+ +M ER I +A YS +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
D LC L AF+LF EM G Y L+ +C G + L +MI +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 370 PDFVTEFSPSLVTYNALIYGNCLL--GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
PD +V ++ALI +C + G++ EA + + M + +SPD V+Y +I GFCK
Sbjct: 315 PD--------VVAFSALI--DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 428 LGELGKA---FELMVEMDEAGGIR-----------------GVDLAVFSSLMKGLSDEVN 467
+L KA +LMV IR G++L SL ++D V
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
Query: 468 YNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMF 527
YN++I +C G++ A L EM V Y +L DG G E L +F
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL----CDNGEPEKALEIF 480
Query: 528 YDLCTS---LPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYK 583
+ S L Y+ +I C+ ++ +L ++G+ K
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV----------------K 524
Query: 584 PDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRV 643
PD YN +I C++ ++ +A ++ +M G + + + LI+A G + ++
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 644 IQNVLR 649
I+ + R
Sbjct: 585 IEEIKR 590
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 199/461 (43%), Gaps = 52/461 (11%)
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
D A +F EM S P L+ ++ L + + + + M +G+ + + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
I C+ +L AF ++++ G P+ T+S LI+ LC + R+SEA +L M+ G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
P LV CL G+ S A L D M+ GF P+ VTY ++ C
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF--------QPNEVTYGPVLKVMCKS 225
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA 453
G+ A+ +LR M E + D V Y+I+I G CK G L AF L EM E G + D+
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKA-DII 283
Query: 454 VFSSLMKGL----------------------SDEVNYNSVINAYCAEGEVSKALILHDEM 491
++++L++G D V ++++I+ + EG++ +A LH EM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF-TYDTLIEN-CSNN 549
G +V Y L DGF K+ + A L M C P T++ LI C N
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG--PNIRTFNILINGYCKAN 401
Query: 550 EFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMY 609
+EL + +RG+ V +TV YN LI C ++ A ++
Sbjct: 402 LIDDGLELFRKMSLRGV------VADTV----------TYNTLIQGFCELGKLEVAKELF 445
Query: 610 MEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
EMV + S L+ L G + + + + +S
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 204/481 (42%), Gaps = 66/481 (13%)
Query: 233 VTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAE 292
V+Y E + + + DA+ +F+ M P + + L + + + + ++ +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 293 MVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE 352
M +GI N T S +I+C C R+LS AF +++ G P + L+ CL G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 353 FSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLS 412
S+A L D M+ G P+L+T NAL+ G CL G+V +A+ ++ M E
Sbjct: 158 VSEALELVDRMVEMG--------HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 413 PDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVI 472
P++V+Y V+ CK G+ A EL+ +M+E R + L D V Y+ +I
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEE----RKIKL-----------DAVKYSIII 254
Query: 473 NAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKAR-TRGAKESLLRMFYDLC 531
+ C +G + A L +EME G ++Y L GF R GAK LLR
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK--LLRDMIKRK 312
Query: 532 TSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNF 591
+ + LI +C F G EA + ++Q PD Y
Sbjct: 313 ITPDVVAFSALI-DC--------------FVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 592 LIVEHCRRRNVDKAYNMYMEMVHYGFASHM--FSVLA-------LIKALFHVGRHNEVRR 642
LI C+ +DKA +M MV G ++ F++L LI + R +R
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 643 VIQNVLRS-------CNINGFELHKALSETGVI--VREDKVKDVLLNVLAEIAMDGLLLN 693
V+ + + C + E+ K L + V VR D V +I +DGL N
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS-------YKILLDGLCDN 470
Query: 694 G 694
G
Sbjct: 471 G 471
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 153/291 (52%), Gaps = 8/291 (2%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSV 95
V G L + EM ++G+ P + L+ C + Q D A +L MV+ G P++
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
T+N+L++ YC+ +D+ + + R M+ V + V++NT+I G C +++ A+EL QE
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN 212
M S+ + PD V+Y L+ + N +A+ +++++++ ++ + Y +IH +C +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPE-KALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 213 -VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
VD A+ +F + G +P + TYN +I C + + +A +FR M + G +P+ N
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
LI G+ K+ ++ E+ G +A T ++D L RL ++F
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSF 616
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 167/655 (25%), Positives = 274/655 (41%), Gaps = 112/655 (17%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
CD D A ++ EM G P+ T+ +L+ YC+ D+ + +L M V PN
Sbjct: 158 CDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNK 217
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V +NT++ C + R ++E+++++M +GL PD VT+N+ I+A+ K V+ A ++
Sbjct: 218 VIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK-VLDASRIFS 276
Query: 188 QMKQQR---IPVPWT-TYTSLIHLLC-------------------------TYNVD---- 214
M+ +P P + TY ++ C +YN+
Sbjct: 277 DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGL 336
Query: 215 -------KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
+A V +M G PS+ +YN L+ C + DA I M G+ PDA
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDA 396
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
V L+ +C G+++ A + EM+ LPNA T + L+ L R+SEA +L R+
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM-IHK------------GFLPDFVT 374
M G +V C GE KA + M +H G + D +
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 375 EFS--PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
E + P L+TY+ L+ G C GR EA + M L PD V+YNI I FCK G++
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKIS 576
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSL------------MKGLSDEV----------NYNS 470
AF ++ +M++ G + L ++SL + GL DE+ YN+
Sbjct: 577 SAFRVLKDMEKKGCHKS--LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 471 VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDL 530
I C +V A L DEM + L + F K A+E
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE--------- 685
Query: 531 CTSLPTFTYDTLIENCSNNE------FKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKP 584
++T + C E F + LA G ++ A +L VL ++
Sbjct: 686 -------VFETAVSICGQKEGLYSLMFNEL--LAAGQLLK-----ATELLEAVLDRGFEL 731
Query: 585 DGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNE 639
+Y L+ C++ ++ A + +M+ G+ +++ +I L +G E
Sbjct: 732 GTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKE 786
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 165/611 (27%), Positives = 257/611 (42%), Gaps = 78/611 (12%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
PSV YN+LL + +++RV+ + + M + P +FN +I LC + A EL
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
EM KG P+ T+ L+ K L + + L + M+ + Y +++ C
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCK-AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 210 TYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP-DRGL---T 264
D + K+ +M G P +VT+N I A C +V DA IF M D L
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 265 PDAVICNTLITFFCKYGELEKA---FE--------------------------------M 289
P+++ N ++ FCK G LE A FE +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL 349
+M ++GI P+ +Y+ L+D LC LS+A + M G+ P Y L+ YC
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 350 VGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEM 409
VG+ A L EM+ LP+ T N L++ +GR+ EA +LR M E
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPN--------AYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 410 SLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA------VFSSLMKG-- 461
D V+ NI++ G C GEL KA E++ M G +L V SL++
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 462 LSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKE 521
L D + Y++++N C G ++A L EM SV Y + F K+ + A
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 522 SLLRMFYDLC-TSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQW 580
L M C SL TY++LI G G++ E +++ + +
Sbjct: 581 VLKDMEKKGCHKSLE--TYNSLI---------------LGLGIKNQIFEIHGLMDEMKEK 623
Query: 581 NYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEV 640
P+ YN I C V+ A N+ EM+ A ++FS LI+A V +
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Query: 641 RRVIQNVLRSC 651
+ V + + C
Sbjct: 684 QEVFETAVSIC 694
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/539 (24%), Positives = 228/539 (42%), Gaps = 80/539 (14%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
+P+V +N +++ +RR++ L ++M G+AP + T+N LI A+ ++
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSS------- 161
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
C VD A ++F EM G +P+ T+ L+ YC
Sbjct: 162 -------------------------C---VDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
+ + M G+ P+ VI NT+++ FC+ G + + +M +M E G++P+
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREM----LGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
T++ I LC + ++ +A +F +M G P Y ++ +C VG A L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+ + L SL +YN + G G+ EA +L+ M + + P SYN
Sbjct: 314 FESIRENDDL--------ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN 365
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEG 479
I++ G CKLG L A ++ M G D V Y +++ YC+ G
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVC---------------PDAVTYGCLLHGYCSVG 410
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTY 539
+V A L EM + L + +L K R A+E LLR + L T T
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE-LLRKMNEKGYGLDTVTC 469
Query: 540 DTLIEN-CSNNEFKSVVELAKGFGMRG---LKNEAAS----VLNTVLQWNYKPDGAVYNF 591
+ +++ C + E +E+ KG + G L N S V +++++ N PD Y+
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 592 LIVEHCRRRNVDKAYNMYMEM---------VHYGFASHMFSVLALIKALFHVGRHNEVR 641
L+ C+ +A N++ EM V Y H F I + F V + E +
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 216/489 (44%), Gaps = 45/489 (9%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDPARES---LIHLLCCDQLQNDNAYKVLSEMVNSGFLPS 94
V G ++ T + +M KG+ P+ S L+ LC + +D A ++ M +G P
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSD-AKTIVGLMKRNGVCPD 395
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQ 151
TY LLH YC +VD A +L+ M PN + N ++ L RI EAEELL+
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY 211
+MN KG D+VT N ++ + + L +AI + M+ S I L
Sbjct: 456 KMNEKGYGLDTVTCNIIVDGLCGSGELD-KAIEIVKGMRVHGSAALGNLGNSYIGL---- 510
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
VD + +I + P L+TY+ L++ C R +A +F M L PD+V N
Sbjct: 511 -VDDS------LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
I FCK G++ AF + +M ++G + +TY+ LI L + ++ E L EM
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
G+SP Y + C + A +L DEM+ K +P++ ++ LI C
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN--------IAPNVFSFKYLIEAFC 675
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
+ + A + + + + Y+++ + G+L KA EL+ EA RG +
Sbjct: 676 KVPDFDMAQEVFETAVSICGQKEGL-YSLMFNELLAAGQLLKATELL----EAVLDRGFE 730
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKAL-ILHDEMEHHGSLRASVLYIMLFDGF 510
L F Y ++ + C + E+ A ILH ++ + L + + DG
Sbjct: 731 LGTFL-----------YKDLVESLCKKDELEVASGILHKMIDRGYGFDPAAL-MPVIDGL 778
Query: 511 DKKARTRGA 519
K + A
Sbjct: 779 GKMGNKKEA 787
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 144/362 (39%), Gaps = 62/362 (17%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE-------------- 124
A ++L +M G+ T N+++ C +D+A+ I++GM V
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509
Query: 125 ------------PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM 172
P++++++T+++GLC R EA+ L EM + L PDSV YN I
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF 569
Query: 173 SKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPS 231
K + A + M+++ TY SLI L N + + + + EM G P+
Sbjct: 570 CKQGK-ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Query: 232 LVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKY----------- 280
+ TYN I C ++V+DA + M + + P+ LI FCK
Sbjct: 629 ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Query: 281 -----------------------GELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
G+L KA E+ +++RG Y L++ LC +
Sbjct: 689 TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDE 748
Query: 318 LSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
L A + +M+ G A ++ +G +A D+M+ + + +
Sbjct: 749 LEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVD 808
Query: 378 PS 379
P+
Sbjct: 809 PN 810
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 206/419 (49%), Gaps = 21/419 (5%)
Query: 52 EMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
+M KG P+ + L+ CD+ D A+ + EM+ G P+V TY VL+ CRD
Sbjct: 291 QMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Query: 110 RVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
+++EA G+ R M + P+V+++N +I+G C R+ A ELL M + P+ T+N
Sbjct: 351 KIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFN 410
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIA 225
L+ + + +A+ L +M + +Y LI LC +++ AYK+ + M
Sbjct: 411 ELMEGLCR-VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC 469
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
EP +T+ +I+A+C + + A M +G++ D V TLI CK G+
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRD 529
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
A + +V+ IL + + ++D L ++ E + ++ GL P Y LV
Sbjct: 530 ALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVD 589
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
G+ + +F + + M G LP+ + Y +I G C GRVEEA +L
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLPN--------VYPYTIIINGLCQFGRVEEAEKLLSA 641
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL--AVFSSLMKGL 462
M + +SP+ V+Y +++ G+ G+L +A E + M E RG +L ++SSL++G
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE----RGYELNDRIYSSLLQGF 696
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 150/622 (24%), Positives = 274/622 (44%), Gaps = 53/622 (8%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----PN 126
C + A +S+++ GF+ LL +CR + +A+ + M+ E PN
Sbjct: 206 CKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPN 265
Query: 127 VVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALY 186
VS++ +I GLC R++EA L +M KG P + TY LI A+ + L+ +A L+
Sbjct: 266 SVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC-DRGLIDKAFNLF 324
Query: 187 DQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
D+M + TYT LI LC +++A V +M+ PS++TYN LI+ YC
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
RV A + M R P+ N L+ C+ G+ KA + M++ G+ P+ +Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+ LID LC + ++ A+ L M + P + ++ A+C G+ A M+
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
KG D VT LI G C +G+ +AL IL + +M + S N+++
Sbjct: 505 KGISLDEVTG--------TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556
Query: 426 CKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL--SDEVN---------------- 467
K ++ + ++ ++++ G + V +++L+ GL S ++
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSV--VTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 468 ----YNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESL 523
Y +IN C G V +A L M+ G V Y ++ G+ + A E+
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET- 673
Query: 524 LRMFYDLCTSLPTFTYDTLIE-------NCSNNEFKSVVELAKGFGMRGLKNEAASVLNT 576
+R + L Y +L++ N+E +V ++A +R E + L +
Sbjct: 674 VRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIA----LRETDPECINELIS 729
Query: 577 VLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG-FASHMFSVLALIKALFHVG 635
V++ + FL+ C+ D++ ++ ++ G F + ++++
Sbjct: 730 VVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDI--IMESYCSKK 787
Query: 636 RHNEVRRVIQNVLRSCNINGFE 657
+H + +I VL+S + F+
Sbjct: 788 KHTKCMELITLVLKSGFVPSFK 809
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/546 (25%), Positives = 239/546 (43%), Gaps = 49/546 (8%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA----MGILR-GMAVEPNVVSFNTV 133
AY M GF+ + Y +++A C++ + A IL+ G ++ ++ + ++
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGT--SL 236
Query: 134 IDGLCAKRRIKEAEELLQEMNSK-GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+ G C +++A ++ M+ + AP+SV+Y+ LI + + L A L DQM ++
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLE-EAFGLKDQMGEK 295
Query: 193 RIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
TYT LI LC +DKA+ +F EMI G +P++ TY LI C ++++A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
G+ R M + P + N LI +CK G + AFE+ M +R PN T+++L++
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
LC + +A L + ML GLSP +Y L+ C G + A+ L M
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-------- 467
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
+ P +T+ A+I C G+ + A L M +S D+V+ +I G CK+G+
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
A ++ + + M+ L+ + N +++ +V + L + ++
Sbjct: 528 RDALFILETLVK---------------MRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEF 551
G + + V Y L DG + G+ L M C LP T+I N
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC--LPNVYPYTIIIN------ 624
Query: 552 KSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYME 611
G G EA +L+ + P+ Y ++ + +D+A
Sbjct: 625 --------GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 612 MVHYGF 617
MV G+
Sbjct: 677 MVERGY 682
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 215/476 (45%), Gaps = 53/476 (11%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVID 135
A KVL+EMV +GF PS+ TYN L+ AY RD +DEAM + MA +P+V ++ T++
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
G +++ A + +EM + G P+ T+N I M N + ++D++ +
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI-KMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 196 VPWTTYTSLIHLLCTYNVDKAYK-VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
T+ +L+ + +D VF EM +GF P T+N LI AY + AM +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
+R M D G+TPD NT++ + G E++ ++ AEM + PN TY L+
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571
Query: 315 QRRLSEAFDLFREMLGGGLSPRE--YAYFNLVGAYC-LVGEFSKAFHLRDEMIHKGFLPD 371
+ + L E+ G + PR LV + C L+ E +AF E+ +GF PD
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF---SELKERGFSPD 628
Query: 372 FVT---------------------------EFSPSLVTYNALIYGNCLLGRVEEALGILR 404
T F+PS+ TYN+L+Y + ++ ILR
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 405 GMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSD 464
+ + PD +SYN VI +C+ + A + EM +G + D
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV---------------PD 733
Query: 465 EVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAK 520
+ YN+ I +Y A+ +A+ + M HG Y + DG+ K R AK
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 131/584 (22%), Positives = 244/584 (41%), Gaps = 66/584 (11%)
Query: 100 VLLHAYCRDKRVDEAMGILRGMAVEP---NVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
+++ ++ RV A + G+ + +V S+ ++I R +EA + ++M
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV-DK 215
G P +TYN ++ K + +L ++MK I TY +LI ++ +
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
A +VF EM A+GF VTYN L+ Y R ++AM + M G +P V N+LI+
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSP 335
+ + G L++A E++ +M E+G P+ TY+ L+ ++ A +F EM G P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 336 REYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE-------------------- 375
+ + Y G+F++ + DE+ G PD VT
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 376 -------FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
F P T+N LI G E+A+ + R M + ++PD +YN V++ +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 429 GELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILH 488
G ++ +++ EM++ + +E+ Y S+++AY E+ L
Sbjct: 538 GMWEQSEKVLAEMEDG---------------RCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 489 DEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF--TYDTLIENC 546
+E+ + G + + + L + C LP + L E
Sbjct: 583 EEV-YSGVIEPRAVLL-----------------KTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 547 SNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAY 606
+ + ++ + +G R + +A VL+ + + + P A YN L+ H R + K+
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 607 NMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
+ E++ G + S +I A R + R+ + S
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 152/631 (24%), Positives = 266/631 (42%), Gaps = 87/631 (13%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
+A + + + GF V +Y L+ A+ R EA+ + + M +P ++++N ++
Sbjct: 191 SAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVIL 250
Query: 135 DGLCA-KRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ + L+++M S G+APD+ TYNTLIT K +L A ++++MK
Sbjct: 251 NVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAG 309
Query: 194 IPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
TY +L+ + ++ +A KV EM+ +GF PS+VTYN LI AY + +AM
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M ++G PD TL++ F + G++E A + EM G PN T++ I
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
+ + +E +F E+ GLSP + L+ + G S+ + EM GF+P+
Sbjct: 430 GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE- 488
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS--------- 423
T+N LI G E+A+ + R M + ++PD +YN V++
Sbjct: 489 -------RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 424 -----------GFCKLGEL-----------GKAFELMVEMDE---AGGI--RGVDLAV-- 454
G CK EL GK LM + E +G I R V L
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601
Query: 455 ---------------FSSLM-KGLSDEVN-YNSVINAYCAEGEVSKALILHDEMEHHGSL 497
FS L +G S ++ NS+++ Y V+KA + D M+ G
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 498 RASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLI-ENCSNNEFKSVVE 556
+ Y L + A G E +LR +Y+T+I C N +
Sbjct: 662 PSMATYNSLMYMHSRSADF-GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR---- 716
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
+A+ + + + PD YN I + ++A + M+ +G
Sbjct: 717 ------------DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Query: 617 FASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
+ + +++ + R +E + ++++
Sbjct: 765 CRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 20 RGFTAAAAA-GSLESEPKKVTSGGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQ 75
RGFT + A SL + G K+ + E+ KG+ P + ++I+ C +
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFG--KSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 76 NDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNT 132
D A ++ SEM NSG +P V TYN + +Y D +EA+G++R M PN ++N+
Sbjct: 716 RD-ASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 133 VIDGLCAKRRIKEAEELLQEM 153
++DG C R EA+ ++++
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDL 795
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/567 (24%), Positives = 264/567 (46%), Gaps = 58/567 (10%)
Query: 79 AYKVLSEMVNSGFLP-SVATYNVLLHAYCRDKRVDEAMGILR---GMAVEPNVVSFNTVI 134
A +L EM +P S TY ++ A+ ++ ++EA+ ++ G + +V++ +++
Sbjct: 293 ALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLV 352
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+G C + +A +L M +GLAPD V ++ ++ KN + +AI Y +MK RI
Sbjct: 353 NGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEME-KAIEFYMRMKSVRI 411
Query: 195 -PVPWTTYTSLIHLLCTYNVDKAYKVFTE----MIASGFEPSLVTYNELIHAYCCRDRVQ 249
P +T + L + + A ++F + IA GF N++ +C + +V
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGF-----MCNKIFLLFCKQGKVD 466
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
A + M +G+ P+ V N ++ C+ ++ A + +EM+E+G+ PN TYS LI
Sbjct: 467 AATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILI 526
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
D + A+D+ +M E Y ++ C VG+ SKA + +I +
Sbjct: 527 DGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE--- 583
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+S S +YN++I G +G + A+ R M+E SP+ V++ +I+GFCK
Sbjct: 584 ----KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639
Query: 430 ELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHD 489
+ A E+ EM + ++L + D Y ++I+ +C + ++ A L
Sbjct: 640 RMDLALEMTHEM------KSMELKL---------DLPAYGALIDGFCKKNDMKTAYTLFS 684
Query: 490 EMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE----- 544
E+ G + +Y L GF + A + +M D S FTY T+I+
Sbjct: 685 ELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND-GISCDLFTYTTMIDGLLKD 743
Query: 545 ---NCSNNEFKSVVELA------------KGFGMRGLKNEAASVLNTVLQWNYKPDGAVY 589
N +++ + +++L G +G +A+ +L + + + P+ +Y
Sbjct: 744 GNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLY 803
Query: 590 NFLIVEHCRRRNVDKAYNMYMEMVHYG 616
+ +I H R N+++A+ ++ EM+ G
Sbjct: 804 STVIAGHHREGNLNEAFRLHDEMLEKG 830
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 159/656 (24%), Positives = 274/656 (41%), Gaps = 90/656 (13%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D A MV+ +P V N +L + R +DEA I M V + V+ +
Sbjct: 186 DYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLL 245
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ +R+ +EA ++ + + S+G PD + ++ + A K +LV+ L + +
Sbjct: 246 MRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLG 305
Query: 194 IPVPWTTYTSLI-HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+P TYTS+I + N+++A +V EM+ G S++ L++ YC + + A+
Sbjct: 306 VPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKAL 365
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNA---------- 302
+F M + GL PD V+ + ++ +FCK E+EKA E M I P++
Sbjct: 366 DLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGC 425
Query: 303 --------------DTY----------SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
D++ +K+ C Q ++ A + M G+ P
Sbjct: 426 LKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVV 485
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEE 398
Y N++ A+C + A + EM+ KG P+ TY+ LI G +
Sbjct: 486 FYNNMMLAHCRMKNMDLARSIFSEMLEKG--------LEPNNFTYSILIDGFFKNKDEQN 537
Query: 399 ALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSL 458
A ++ M + ++V YN +I+G CK+G+ KA E++ + I+ ++ +
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL-----IKEKRYSMSCT- 591
Query: 459 MKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRG 518
+YNS+I+ + G+ A+ + EM +G V + L +GF K R
Sbjct: 592 --------SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 519 AKESLLRM-FYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNT 576
A E M +L LP Y LI+ C N+ K+ L GL
Sbjct: 644 ALEMTHEMKSMELKLDLP--AYGALIDGFCKKNDMKTAYTLFSELPELGL---------- 691
Query: 577 VLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
P+ +VYN LI +D A ++Y +MV+ G + +F+ +I L G
Sbjct: 692 ------MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
Query: 637 HN----------EVRRVIQNVLRSCNINGFELHKALSETGVIVREDKVKDVLLNVL 682
N ++ V +L +NG + ++ E K KDV NVL
Sbjct: 746 INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL 801
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 196/400 (49%), Gaps = 14/400 (3%)
Query: 66 IHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---A 122
I LL C Q + D A L M G P+V YN ++ A+CR K +D A I M
Sbjct: 455 IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 123 VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRA 182
+EPN +++ +IDG + + A +++ +MN+ + V YNT+I + K
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 183 IALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHA 241
L + +K++R + T+Y S+I + + D A + + EM +G P++VT+ LI+
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
+C +R+ A+ + M L D LI FCK +++ A+ + +E+ E G++PN
Sbjct: 635 FCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPN 694
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
Y+ LI ++ A DL+++M+ G+S + Y ++ G + A L
Sbjct: 695 VSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYS 754
Query: 362 EMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIV 421
E++ G +PD + L+ G G+ +A +L M + ++P+ + Y+ V
Sbjct: 755 ELLDLGIVPDEILHM--------VLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTV 806
Query: 422 ISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG 461
I+G + G L +AF L EM E G + D VF+ L+ G
Sbjct: 807 IAGHHREGNLNEAFRLHDEMLEKGIVH--DDTVFNLLVSG 844
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 203/453 (44%), Gaps = 33/453 (7%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVA---TYNVLLHAYCRDKRVDEAMGILRGM 121
L+H + L+ ++ L E+ N F +A N + +C+ +VD A L+ M
Sbjct: 417 LVHTMIQGCLKAESPEAAL-EIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMM 475
Query: 122 ---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL 178
+EPNVV +N ++ C + + A + EM KGL P++ TY+ LI KN +
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 179 VIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASG-FEPSLVTYN 236
A + +QM Y ++I+ LC KA ++ +I + S +YN
Sbjct: 536 Q-NAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER 296
+I + A+ +R M + G +P+ V +LI FCK ++ A EM EM
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 297 GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
+ + Y LID C + + A+ LF E+ GL P Y +L+ + +G+ A
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 357 FHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
L +M++ G S L TY +I G G + A + + ++ + PD++
Sbjct: 715 IDLYKKMVNDGI--------SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEI 766
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYC 476
+ ++++G K G+ KA +++ EM + V L Y++VI +
Sbjct: 767 LHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLL---------------YSTVIAGHH 811
Query: 477 AEGEVSKALILHDEMEHHGSLRASVLYIMLFDG 509
EG +++A LHDEM G + ++ +L G
Sbjct: 812 REGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 208/466 (44%), Gaps = 54/466 (11%)
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
GFE + +N L++AY R+ A+ F M DR + P N +++ + +++A
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
E+ +MV G+ + T L+ +R+ EA +FR ++ G P + V A
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGM 406
C + A L EM K +P S TY ++I G +EEA+ ++ M
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVP-------ASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 407 AEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEV 466
+ ++ +++G+CK ELGKA +L M+E G LA D+V
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG------LA---------PDKV 381
Query: 467 NYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
++ ++ +C E+ KA+ + M+ +SVL + G K + E+ L +
Sbjct: 382 MFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE----SPEAALEI 437
Query: 527 FYDLCTSLPTFTYDTLIEN---CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYK 583
F D ++++ I + C+ ++ F +G + A S L + Q +
Sbjct: 438 FND--------SFESWIAHGFMCN--------KIFLLFCKQGKVDAATSFLKMMEQKGIE 481
Query: 584 PDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRV 643
P+ YN +++ HCR +N+D A +++ EM+ G + F+ LI F N+ +
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF----KNKDEQN 537
Query: 644 IQNVLRSCNINGFELHKALSETGV-----IVREDKVKDVLLNVLAE 684
+V+ N + FE ++ + T + + + K K++L N++ E
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 158/582 (27%), Positives = 259/582 (44%), Gaps = 79/582 (13%)
Query: 89 SGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKE 145
+G P++ TYNVL+ C+ K ++A G L M E P+V S++TVI+ L ++ +
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 146 AEELLQEMNSKGLAPDSVTYNTLI----------TAMS---------------KNTNLVI 180
A EL EM+ +G+APD YN LI TAM K N++I
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 181 RAIA----------LYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFE 229
++ ++++MKQ TY+SLIH LC NVDKA VF E+
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS 322
Query: 230 PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
+VTYN ++ +C ++++++ ++R M + + + V N LI + G++++A +
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMI 381
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL 349
M +G + TY I LC +++A + +E+ G YAY +++ C
Sbjct: 382 WRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCK 441
Query: 350 VGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEM 409
+A +L EM G E + + NALI G R+ EA LR M +
Sbjct: 442 KKRLEEASNLVKEMSKHG------VELNSHVC--NALIGGLIRDSRLGEASFFLREMGKN 493
Query: 410 SLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYN 469
P VSYNI+I G CK G+ G+A + EM E G DL +S L+ GL
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW--KPDLKTYSILLCGL------- 544
Query: 470 SVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYD 529
C + ++ AL L + G +++ +L G + A + M +
Sbjct: 545 ------CRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 530 LCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVY 589
CT+ TY+TL+E GF G N A + + + +PD Y
Sbjct: 599 NCTA-NLVTYNTLME---------------GFFKVGDSNRATVIWGYMYKMGLQPDIISY 642
Query: 590 NFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKAL 631
N ++ C R V A + + ++G +++ L++A+
Sbjct: 643 NTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 145/562 (25%), Positives = 248/562 (44%), Gaps = 50/562 (8%)
Query: 101 LLHAYCRDKRVDEAMGILRGM----AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
++ Y ++ D+A+ + + M EP + S+NT+++ ++ + E L +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDK 215
G+AP+ TYN LI MS +A D M ++ +Y+++I+ L +D
Sbjct: 144 GVAPNLQTYNVLIK-MSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF-RGMPDRGLTPDAVICNTLI 274
A ++F EM G P + YN LI + + AM ++ R + D + P+ N +I
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+ K G ++ ++ M + + TYS LI LC + +A +F E+ S
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS 322
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
Y ++G +C G+ ++ L M HK S ++V+YN LI G G
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN---------SVNIVSYNILIKGLLENG 373
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAV 454
+++EA I R M + D +Y I I G C G + KA +M E++ +GG L V
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG----HLDV 429
Query: 455 FSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKA 514
++ Y S+I+ C + + +A L EM HG S + L G + +
Sbjct: 430 YA-----------YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 515 RTRGAKESLLRMFYDLCTSLPTF-TYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASV 573
R A L M + C PT +Y+ LI C G G EA++
Sbjct: 479 RLGEASFFLREMGKNGCR--PTVVSYNILI--C-------------GLCKAGKFGEASAF 521
Query: 574 LNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFH 633
+ +L+ +KPD Y+ L+ CR R +D A ++ + + G + + LI L
Sbjct: 522 VKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCS 581
Query: 634 VGRHNEVRRVIQNV-LRSCNIN 654
VG+ ++ V+ N+ R+C N
Sbjct: 582 VGKLDDAMTVMANMEHRNCTAN 603
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 6/286 (2%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA-- 122
IH LC + N A V+ E+ +SG V Y ++ C+ KR++EA +++ M+
Sbjct: 400 FIHGLCVNGYVN-KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 123 -VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
VE N N +I GL R+ EA L+EM G P V+YN LI + K
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG-E 517
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIH 240
A A +M + TY+ L+ LC +D A +++ + + SG E ++ +N LIH
Sbjct: 518 ASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
C ++ DAM + M R T + V NTL+ F K G+ +A + M + G+ P
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ +Y+ ++ LC R +S A + F + G+ P Y + LV A
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 40/173 (23%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVAT 97
+G + + V EM G P ++ LLC C + D A ++ + + SG V
Sbjct: 512 AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMM 571
Query: 98 YNVLLHAYCRDKRVDEAM--------------------------------------GILR 119
+N+L+H C ++D+AM G +
Sbjct: 572 HNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMY 631
Query: 120 GMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM 172
M ++P+++S+NT++ GLC R + A E + + G+ P T+N L+ A+
Sbjct: 632 KMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 161/625 (25%), Positives = 268/625 (42%), Gaps = 76/625 (12%)
Query: 53 MNRKGLDPARES---LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
M R G + ES + H+L C ++ D A VL EMV S D
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYD-ANSVLKEMVLSK----------------ADC 175
Query: 110 RVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLI 169
V + + R + V P F+ + L ++EA + +M + P + + N L+
Sbjct: 176 DVFDVLWSTRNVCV-PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLL 234
Query: 170 TAMSK--NTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIAS 226
+K T+ V R D + P +T Y +I +C +V+ A +F EM
Sbjct: 235 HRFAKLGKTDDVKRFFK--DMIGAGARPTVFT-YNIMIDCMCKEGDVEAARGLFEEMKFR 291
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G P VTYN +I + R+ D + F M D PD + N LI FCK+G+L
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
E EM G+ PN +YS L+D C + + +A + +M GL P EY Y +L+ A
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGM 406
C +G S AF L +EM+ G ++VTY ALI G C R++EA + M
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVG--------VEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 407 AEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL---- 462
+ P+ SYN +I GF K + +A EL+ E+ + GI+ DL ++ + + GL
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKP-DLLLYGTFIWGLCSLE 521
Query: 463 ------------------SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYI 504
++ + Y ++++AY G ++ L L DEM+ V +
Sbjct: 522 KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC 581
Query: 505 MLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGM 563
+L DG K A + R+ D + +I+ C +N+ ++
Sbjct: 582 VLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA---------- 631
Query: 564 RGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFS 623
A ++ ++Q PD Y L+ + ++ NV +A + +M G + +
Sbjct: 632 ------ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685
Query: 624 VLALIKALFHVGRHNEVRRVIQNVL 648
+L+ L H + + R ++ ++
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMI 710
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 185/394 (46%), Gaps = 18/394 (4%)
Query: 52 EMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRD 108
EM GL P + +L+ C + + A K +M G +P+ TY L+ A C+
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQ-QAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 415
Query: 109 KRVDEAMGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTY 165
+ +A + + + VE NVV++ +IDGLC R+KEAEEL +M++ G+ P+ +Y
Sbjct: 416 GNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASY 475
Query: 166 NTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMI 224
N LI K N+ RA+ L +++K + I Y + I LC+ ++ A V EM
Sbjct: 476 NALIHGFVKAKNM-DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 225 ASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
G + + + Y L+ AY + + + M + + V LI CK +
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 285 KAFEMRAEMV-ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNL 343
KA + + + G+ NA ++ +ID LC ++ A LF +M+ GL P AY +L
Sbjct: 595 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 654
Query: 344 VGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGIL 403
+ G +A LRD+M G D L+ Y +L++G ++++A L
Sbjct: 655 MDGNFKQGNVLEALALRDKMAEIGMKLD--------LLAYTSLVWGLSHCNQLQKARSFL 706
Query: 404 RGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
M + PD+V V+ +LG + +A EL
Sbjct: 707 EEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 153/304 (50%), Gaps = 6/304 (1%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL---RGMAVEPNV 127
CD + A ++ +M +G +P++A+YN L+H + + K +D A+ +L +G ++P++
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
+ + T I GLC+ +I+ A+ ++ EM G+ +S+ Y TL+ A K+ N + L D
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN-PTEGLHLLD 566
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIAS-GFEPSLVTYNELIHAYCCR 245
+MK+ I V T+ LI LC V KA F + G + + + +I C
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
++V+ A +F M +GL PD +L+ K G + +A +R +M E G+ + Y
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+ L+ L +L +A EM+G G+ P E +++ + +G +A L+ ++
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
Query: 366 KGFL 369
L
Sbjct: 747 HQLL 750
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 33/273 (12%)
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P ++AL LG +EEA+ M + P S N ++ F KLG+
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
+M AG V YN +I+ C EG+V A L +EM+ G +
Sbjct: 250 FKDMIGAGARPTV---------------FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV 294
Query: 498 RASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVE 556
+V Y + DGF K R D+C TY+ LI C + +E
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTV-CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
+ GLK P+ Y+ L+ C+ + +A Y++M G
Sbjct: 354 FYREMKGNGLK----------------PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 617 FASHMFSVLALIKALFHVGRHNEVRRVIQNVLR 649
+ ++ +LI A +G ++ R+ +L+
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 193/423 (45%), Gaps = 60/423 (14%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTV 133
D A +V M LP TY L+ C+++R+DEA+ +L M E P+ V +N +
Sbjct: 204 DRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVL 263
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
IDGLC K + +L+ M KG P+ VTYNT
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT-------------------------- 297
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
LIH LC +DKA + M++S P+ VTY LI+ + R DA+
Sbjct: 298 ----------LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M +RG + I + LI+ K G+ E+A + +M E+G PN YS L+D L
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C + + +EA ++ M+ G P Y Y +L+ + G +A + EM G
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG----- 462
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
S + Y+ LI G C +GRV+EA+ + M + + PD V+Y+ +I G C +G +
Sbjct: 463 ---CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME 492
A +L EM + K D V YN +++ C + ++S+A+ L + M
Sbjct: 520 AALKLYHEM------------LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 493 HHG 495
G
Sbjct: 568 DRG 570
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 128/534 (23%), Positives = 224/534 (41%), Gaps = 54/534 (10%)
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVV---SFNTVIDGLCAKRRIKEAEELLQE 152
+T + ++ +Y D +L + +E V+ SF V +A +L
Sbjct: 78 STLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHR 137
Query: 153 MNSKGLAPDSV-TYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWT----TYTSLIHL 207
M + SV ++N+++ + N L R + YD + + + + ++ +I
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVII-NEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKA 196
Query: 208 LCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPD 266
LC VD+A +VF M P TY L+ C +R+ +A+ + M G +P
Sbjct: 197 LCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPS 256
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
VI N LI CK G+L + ++ M +G +PN TY+ LI LC + +L +A L
Sbjct: 257 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 327 EMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF-LPDFVTEFSPSLVTYNA 385
M+ P + Y L+ + A L M +G+ L + Y+
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI---------YSV 367
Query: 386 LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
LI G G+ EEA+ + R MAE P+ V Y++++ G C+ G+ +A E++ M +G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 446 GIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIM 505
+ + +SSLMKG + G +A+ + EM+ G R Y +
Sbjct: 428 CLP--NAYTYSSLMKG-------------FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 506 LFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRG 565
L DG R + A +M + T Y ++I KG G
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKML-TIGIKPDTVAYSSII---------------KGLCGIG 516
Query: 566 LKNEAASVLNTVL---QWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
+ A + + +L + +PD YN L+ C ++++ +A ++ M+ G
Sbjct: 517 SMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 145/304 (47%), Gaps = 29/304 (9%)
Query: 73 QLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVS 129
Q + +A ++LS M G+ + Y+VL+ ++ + +EAM + R MA +PN+V
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
++ ++DGLC + + EA+E+L M + G P++ TY++L+ K T L A+ ++ +M
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK-TGLCEEAVQVWKEM 458
Query: 190 KQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRV 248
+ Y+ LI LC V +A V+++M+ G +P V Y+ +I C +
Sbjct: 459 DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518
Query: 249 QDAMGIFRGM---PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
A+ ++ M + PD V N L+ C ++ +A ++ M++RG P+ T
Sbjct: 519 DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578
Query: 306 SKLIDCLCPQ---------------------RRLSEAFDLFREMLGGGLSPREYAYFNLV 344
+ ++ L + +R+S A + MLG L+P+ + +V
Sbjct: 579 NTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIV 638
Query: 345 GAYC 348
C
Sbjct: 639 REIC 642
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 140/351 (39%), Gaps = 39/351 (11%)
Query: 298 ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAF 357
I PN +++ +I LC R + A ++FR M P Y Y L+ C +A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 358 HLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVS 417
L DEM +G SPS V YN LI G C G + ++ M P++V+
Sbjct: 243 LLLDEMQSEGC--------SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294
Query: 418 YNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCA 477
YN +I G C G+L KA L+ M + K + ++V Y ++IN
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSS---------------KCIPNDVTYGTLINGLVK 339
Query: 478 EGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF 537
+ + A+ L ME G +Y +L G K+ + A SL R +
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM-SLWRKMAEKGCKPNIV 398
Query: 538 TYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHC 597
Y L++ G G NEA +LN ++ P+ Y+ L+
Sbjct: 399 VYSVLVD---------------GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Query: 598 RRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL 648
+ ++A ++ EM G + + F LI L VGR E V +L
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML 494
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 199/449 (44%), Gaps = 83/449 (18%)
Query: 73 QLQNDNAYKVLSEMVNSGFLPSVA-----------------------------------T 97
++ ++A+ + EMV+S LPS+ +
Sbjct: 49 SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108
Query: 98 YNVLLHAYCRDKRVDEAMGILRGM------------------------------------ 121
+ +L+H +CR R+ A+ +L M
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 122 --AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLV 179
EPNVV +NT+IDGLC + A ELL EM KGL D VTYNTL+T + +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 180 IRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNEL 238
A L D MK+ P T+T+LI + N+D+A +++ EMI S +P+ VTYN +
Sbjct: 229 DAARMLRDMMKRSINP-DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 239 IHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
I+ C R+ DA F M +G P+ V NTLI+ FCK+ +++ ++ M G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 299 LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
+ TY+ LI C +L A D+F M+ ++P + L+ C+ GE A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
D+M +E +V YN +I+G C +VE+A + + + PD +Y
Sbjct: 408 KFDDMRE--------SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAGGI 447
I+I G CK G +A EL+ M E G I
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 198/416 (47%), Gaps = 22/416 (5%)
Query: 90 GFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEA 146
G + ++ +L+H +CR R+ A+ +L M EP++V+F +++ G C RI +A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 147 EELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
L+ M G P+ V YNTLI + KN L I A+ L ++M+++ + TY +L+
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI-ALELLNEMEKKGLGADVVTYNTLLT 219
Query: 207 LLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
LC + A ++ +M+ P +VT+ LI + + + +A +++ M + P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
+ V N++I C +G L A + M +G PN TY+ LI C R + E LF
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 326 REMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNA 385
+ M G + + Y L+ YC VG+ A + M+ + PD ++T+
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD--------IITHCI 391
Query: 386 LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
L++G C+ G +E AL M E V+YNI+I G CK ++ KA+EL +
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP--- 448
Query: 446 GIRGV--DLAVFSSLMKGLSD---EVNYNSVINAYCAEGEVSKALILHDEMEHHGS 496
+ GV D ++ ++ GL + +I EG + + D +E H S
Sbjct: 449 -VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSS 503
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 195/452 (43%), Gaps = 42/452 (9%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVID 135
A+ E + +GFL S+ R ++A + M P++V F ++
Sbjct: 34 AFSDYREKLRTGFLHSI--------------RFEDAFALFFEMVHSQPLPSIVDFTRLLT 79
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
RR + Q+M G++ D ++ LI + + L L MK P
Sbjct: 80 ATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEP 139
Query: 196 VPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
T+ SL+H C N + A+ + M+ SG+EP++V YN LI C + A+ +
Sbjct: 140 -SIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
M +GL D V NTL+T C G A M +M++R I P+ T++ LID
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
Q L EA +L++EM+ + P Y +++ C+ G A D M KG P+
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN--- 315
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
+VTYN LI G C V+E + + + M+ + D +YN +I G+C++G+L A
Sbjct: 316 -----VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
++ M + D + + +++ C GE+ AL+ D+M
Sbjct: 371 LDIFCWMVSR---------------RVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
V Y ++ G K + A E R+
Sbjct: 416 EKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 162/379 (42%), Gaps = 76/379 (20%)
Query: 65 LIHLLC-CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM-- 121
LIH C C +L A VL +M+ G+ PS+ T+ LLH +C R+ +A ++ M
Sbjct: 112 LIHCFCRCSRLSF--ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 122 -AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM-------- 172
EPNVV +NT+IDGLC + A ELL EM KGL D VTYNTL+T +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 173 -----------SKNTNLVI---------------RAIALYDQMKQQRIPVPWTTYTSLIH 206
S N ++V A LY +M Q + TY S+I+
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 207 LLC-------------------------TYN-----------VDKAYKVFTEMIASGFEP 230
LC TYN VD+ K+F M GF
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 231 SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMR 290
+ TYN LIH YC +++ A+ IF M R +TPD + L+ C GE+E A
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 291 AEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLV 350
+M E Y+ +I LC ++ +A++LF + G+ P Y ++ C
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 351 GEFSKAFHLRDEMIHKGFL 369
G +A L M +G +
Sbjct: 470 GPRREADELIRRMKEEGII 488
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 196/470 (41%), Gaps = 49/470 (10%)
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
+ A+ +F EM+ S PS+V + L+ A R + + + M G++ D L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
I FC+ L A + +M++ G P+ T+ L+ C R+ +AF L M+ G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
P Y L+ C GE + A L +EM KG D +VTYN L+ G C
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD--------VVTYNTLLTGLCYS 224
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA 453
GR +A +LR M + S++PD V++ +I F K G L +A EL EM ++ VD
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS----VD-- 278
Query: 454 VFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
+ V YNS+IN C G + A D M G V Y L GF K
Sbjct: 279 ---------PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 514 ARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVE---------------- 556
+ RM + + FTY+TLI C + + ++
Sbjct: 330 RMVDEGMKLFQRMSCEGFNA-DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Query: 557 ---LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAV-YNFLIVEHCRRRNVDKAYNMYMEM 612
L G + G + E+A V ++ + K G V YN +I C+ V+KA+ ++ +
Sbjct: 389 HCILLHGLCVNG-EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447
Query: 613 VHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS---CNINGFELH 659
G + +I L G E +I+ + C +N + H
Sbjct: 448 PVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDH 497
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 160/389 (41%), Gaps = 50/389 (12%)
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
L T F E AF + EMV LP+ +++L+ RR ++M G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
+S Y++ L+ +C S A + +M+ G+ PS+VT+ +L++G CL
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY--------EPSIVTFGSLLHGFCL 153
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
+ R+ +A ++ M + P+ V YN +I G CK GEL A EL+ EM++
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK--------- 204
Query: 453 AVFSSLMKGL-SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
KGL +D V YN+++ C G S A + +M V + L D F
Sbjct: 205 -------KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 512 KKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAA 571
K+ A+E Y +I++ + + + G M G +A
Sbjct: 258 KQGNLDEAQE----------------LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 572 SVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKAL 631
+ + P+ YN LI C+ R VD+ ++ M GF + +F+ LI
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 632 FHVGRHNEV---------RRVIQNVLRSC 651
VG+ RRV +++ C
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHC 390
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 187/380 (49%), Gaps = 26/380 (6%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSF 130
C Q D+A+ V EM+N+G P+ +TYN+ + A C R+D+A +L MA P+VVS+
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA-PDVVSY 377
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
NT++ G + EA L ++ + + P VTYNTLI + ++ NL A L ++M
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE-GAQRLKEEMT 436
Query: 191 QQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD--- 246
Q I TYT+L+ + N+ A +V+ EM+ G +P +AY R
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD-------GYAYTTRAVGE 489
Query: 247 -RVQDAMGIFRGMPDRGLT----PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
R+ D+ FR + T PD I N I CK G L KA E + ++ G++P+
Sbjct: 490 LRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPD 549
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
TY+ +I + A +L+ EML L P YF L+ + G +AF
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYST 609
Query: 362 EMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIV 421
EM +G P+++T+NAL+YG C G ++EA L M E + P+ SY ++
Sbjct: 610 EMKKRGV--------RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Query: 422 ISGFCKLGELGKAFELMVEM 441
IS C + + +L EM
Sbjct: 662 ISKNCDFEKWEEVVKLYKEM 681
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 151/567 (26%), Positives = 231/567 (40%), Gaps = 54/567 (9%)
Query: 83 LSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCA 139
+M+ GFLPSV N++L + +++A + M + P V++FNT++D
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 140 KRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWT 199
++ +++ EM + + VTYN LI SKN + A + M++ V
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKME-EARRFHGDMRRSGFAVTPY 309
Query: 200 TYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
++ LI C + D A+ V EM+ +G P+ TYN I A C R+ DA + M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRL 318
PD V NTL+ + K G+ +A + ++ I P+ TY+ LID LC L
Sbjct: 370 A----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 319 SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSP 378
A L EM + P Y LV + G S A + DEM+ KG PD
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYA---- 481
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGM-AEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
Y G LG ++A + M A +PD YN+ I G CK+G L KA E
Sbjct: 482 ----YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
++ G + D V Y +VI Y G+ A L+DEM
Sbjct: 538 QRKIFRVGLV---------------PDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 498 RASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDT-LIENCSNNEFKSVVE 556
+ + Y +L G K R A F Y T + + +
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQA-----------------FQYSTEMKKRGVRPNVMTHNA 625
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
L G G +EA L + + P+ Y LI ++C ++ +Y EM+
Sbjct: 626 LLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKE 685
Query: 617 FASHMFSVLALIKALFHVGRHNEVRRV 643
++ AL K H+ + +E R V
Sbjct: 686 IEPDGYTHRALFK---HLEKDHESREV 709
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 232/525 (44%), Gaps = 41/525 (7%)
Query: 45 KTTTTVSEMNRKGLDPARES--LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLL 102
K + +M RKG P+ + ++ + D + A V M+ G +P+V T+N +L
Sbjct: 186 KFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTML 245
Query: 103 HAYCRD---KRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLA 159
+ + +RVD+ ++ +E + V++N +I+G +++EA +M G A
Sbjct: 246 DSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFA 305
Query: 160 PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYK 218
++N LI K L A + D+M I +TY I LC + +D A +
Sbjct: 306 VTPYSFNPLIEGYCKQ-GLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 364
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
+ + M A P +V+YN L+H Y + +A +F + + P V NTLI C
Sbjct: 365 LLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
+ G LE A ++ EM + I P+ TY+ L+ LS A +++ EML G+ P Y
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEE 398
AY +G+ KAF L +EM+ +P L YN I G C +G + +
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEMVA-------TDHHAPDLTIYNVRIDGLCKVGNLVK 533
Query: 399 ALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSL 458
A+ R + + L PD V+Y VI G+ + G+ A L EM L
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM----------------L 577
Query: 459 MKGLSDEV-NYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTR 517
K L V Y +I + G + +A EM+ G + + L G K
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 518 GAKESLLRMFYDLCTSLP--TFTYDTLI-ENCSNNEFKSVVELAK 559
A L +M + +P ++Y LI +NC +++ VV+L K
Sbjct: 638 EAYRYLCKMEEE---GIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 6/239 (2%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----PNVVSFNTVI 134
A +V EM+ G P Y R D+A + M P++ +N I
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
DGLC + +A E +++ GL PD VTY T+I +N + A LYD+M ++R+
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKM-ARNLYDEMLRKRL 581
Query: 195 PVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
TY LI+ +++A++ TEM G P+++T+N L++ C + +A
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
M + G+ P+ LI+ C + + E+ ++ EM+++ I P+ T+ L L
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
+ A++ +EM G P+V T+N LL+ C+ +DEA L M + PN S+ +
Sbjct: 602 EQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN 175
I C + +E +L +EM K + PD T+ L + K+
Sbjct: 662 ISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 212/453 (46%), Gaps = 31/453 (6%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE 124
++H LC + D A K++ M +P + + L+ R ++D+AM ILR M +
Sbjct: 110 ILHNLCSNGKLTD-ACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMS 168
Query: 125 ---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
P+ +++N +I LC K I+ A LL++M+ G PD +TYNT+I M N +
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN-AEQ 227
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIH 240
AI + Q P TYT L+ L+C Y +A +V +M G P +VTYN L++
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
C R +++ + + + GL + V NTL+ C + ++ E+ M + P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
TY+ LI+ LC R LS A D F +ML P Y ++GA SK +
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA------MSKEGMVD 401
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
D + G L + T P L+TYN++I G G +++AL + M + + PDD++
Sbjct: 402 DAIELLGLLKN--TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRS 459
Query: 421 VISGFCKLGELGKAFELMVEMDEAG-GIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEG 479
+I GFC+ + +A +++ E G GIRG Y VI C +
Sbjct: 460 LIYGFCRANLVEEAGQVLKETSNRGNGIRG----------------STYRLVIQGLCKKK 503
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
E+ A+ + + M G +Y + G ++
Sbjct: 504 EIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEE 536
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 5/292 (1%)
Query: 69 LCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEP 125
L C + A +VL +M G P + TYN L++ CR ++E +++ + +E
Sbjct: 253 LVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLEL 312
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
N V++NT++ LC+ E EE+L M P +TYN LI + K L+ RAI
Sbjct: 313 NTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCK-ARLLSRAIDF 371
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
+ QM +Q+ TY +++ + VD A ++ + + P L+TYN +I
Sbjct: 372 FYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAK 431
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
+ ++ A+ ++ M D G+ PD + +LI FC+ +E+A ++ E RG T
Sbjct: 432 KGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGST 491
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
Y +I LC ++ + A ++ ML GG P E Y +V +G S+A
Sbjct: 492 YRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 159/357 (44%), Gaps = 48/357 (13%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTV 133
+ A + + + +G P + TY VL+ CR A+ +L MAVE P++V++N++
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
++ C + ++E ++Q + S GL ++VTYNT
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT-------------------------- 319
Query: 194 IPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
L+H LC++ D+ ++ M + + P+++TYN LI+ C + A+
Sbjct: 320 ----------LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAI 369
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
F M ++ PD V NT++ K G ++ A E+ + P TY+ +ID L
Sbjct: 370 DFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGL 429
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
+ + +A +L+ +ML G+ P + +L+ +C +A + E ++G
Sbjct: 430 AKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG----- 484
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
S TY +I G C +E A+ ++ M PD+ Y ++ G ++G
Sbjct: 485 -NGIRGS--TYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 184/497 (37%), Gaps = 109/497 (21%)
Query: 120 GMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLV 179
G E + + N ++ LC+ ++ +A +L++ M P + + L+
Sbjct: 97 GPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLV---------- 146
Query: 180 IRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELI 239
R +A DQ+ DKA + M+ SG P +TYN +I
Sbjct: 147 -RGLARIDQL------------------------DKAMCILRVMVMSGGVPDTITYNMII 181
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL 299
C + ++ A+ + M G PD + NT+I YG E+A + ++ G
Sbjct: 182 GNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCP 241
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P TY+ L++ +C + A ++ +M G P Y +LV C G + +
Sbjct: 242 PFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASV 301
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
++ G + VTYN L++ C +E IL M + S P ++YN
Sbjct: 302 IQHILSHGL--------ELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYN 353
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEG 479
I+I+G CK L +A + +M E K L D V YN+V+ A EG
Sbjct: 354 ILINGLCKARLLSRAIDFFYQMLEQ---------------KCLPDIVTYNTVLGAMSKEG 398
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTY 539
V A+ LL + + C TY
Sbjct: 399 MVDDAI------------------------------------ELLGLLKNTCCPPGLITY 422
Query: 540 DTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRR 599
+++I+ G +GL +A + + +L PD LI CR
Sbjct: 423 NSVID---------------GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRA 467
Query: 600 RNVDKAYNMYMEMVHYG 616
V++A + E + G
Sbjct: 468 NLVEEAGQVLKETSNRG 484
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%), Gaps = 9/241 (3%)
Query: 41 GGLLKTTTTVSEMNRKGLD---PARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
G L + + + + GL+ +L+H LC + D ++L+ M + + P+V T
Sbjct: 293 GNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYW-DEVEEILNIMYQTSYCPTVIT 351
Query: 98 YNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
YN+L++ C+ + + A+ M + P++V++NTV+ + + + +A ELL +
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-V 213
+ P +TYN++I ++K L+ +A+ LY QM I T SLI+ C N V
Sbjct: 412 NTCCPPGLITYNSVIDGLAKK-GLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLV 470
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
++A +V E G TY +I C + ++ A+ + M G PD I +
Sbjct: 471 EEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAI 530
Query: 274 I 274
+
Sbjct: 531 V 531
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 39/267 (14%)
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
T N +++ C G++ +A ++ MA + P S + ++ G ++ +L KA ++ M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 442 DEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASV 501
+GG+ D + YN +I C +G + AL+L ++M SL S
Sbjct: 166 VMSGGV---------------PDTITYNMIIGNLCKKGHIRTALVLLEDM----SLSGSP 206
Query: 502 LYIMLFDGFDKKARTRGAKESLLRMFYD-LCTSLPTF--TYDTLIE-NCSNNEFKSVVEL 557
++ ++ + G E +R + D L P F TY L+E C +E+
Sbjct: 207 PDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEV 266
Query: 558 AKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGF 617
+ + G PD YN L+ +CRR N+++ ++ ++ +G
Sbjct: 267 LEDMAVEGCY----------------PDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGL 310
Query: 618 ASHMFSVLALIKALFHVGRHNEVRRVI 644
+ + L+ +L +EV ++
Sbjct: 311 ELNTVTYNTLLHSLCSHEYWDEVEEIL 337
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 187/373 (50%), Gaps = 13/373 (3%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR---GMAVEPNVVSFNTVID 135
A L +M+ GF PS+ T+ L++ +C R EAM ++ G+ EPNVV +NT+ID
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID 192
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
LC K ++ A ++L+ M G+ PD VTYN+LIT + + + A L D M+ P
Sbjct: 193 SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISP 252
Query: 196 VPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
T+++LI + + +A K + EMI P++VTYN LI+ C + +A +
Sbjct: 253 -DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKV 311
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
+ +G P+AV NTLI +CK ++ ++ M G+ + TY+ L C
Sbjct: 312 LNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ 371
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
+ S A + M+ G+ P Y + L+ C G+ KA +R E + K +
Sbjct: 372 AGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL-VRLEDLQK-------S 423
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
+ ++TYN +I G C +VE+A + +A +SPD ++Y ++ G + +A
Sbjct: 424 KTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREA 483
Query: 435 FELMVEMDEAGGI 447
EL +M + G+
Sbjct: 484 HELYRKMQKEDGL 496
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 205/479 (42%), Gaps = 70/479 (14%)
Query: 73 QLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVS 129
++ ++A + +M S LPS+ ++ LL A + + + + + R + + ++ S
Sbjct: 57 SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYS 116
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
F T+ID C R+ A L +M G P VT+ +L+ + N A++L DQ+
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC-HVNRFYEAMSLVDQI 175
Query: 190 KQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
+ G+EP++V YN +I + C + +V
Sbjct: 176 ----------------------------------VGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
A+ + + M G+ PD V N+LIT G + + ++M+ GI P+ T+S LI
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
D + +L EA + EM+ ++P Y +L+ C+ G +A + + ++ KGF
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
P+ VTYN LI G C RV++ + IL M+ + D +YN + G+C+ G
Sbjct: 322 PN--------AVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 430 ELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE----------------------VN 467
+ A +++ M G D+ F+ L+ GL D +
Sbjct: 374 KFSAAEKVLGRMVSCG--VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIIT 431
Query: 468 YNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
YN +I C +V A L + G + YI + G +K R A E +M
Sbjct: 432 YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 134/307 (43%), Gaps = 38/307 (12%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG---MAVEPNV 127
C++ Q + A VL M G P V TYN L+ + IL M + P+V
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
++F+ +ID + ++ EA++ EM + + P+ VTYN+LI +
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC-------------- 300
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
IH L +D+A KV +++ GF P+ VTYN LI+ YC R
Sbjct: 301 -----------------IHGL----LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKR 339
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
V D M I M G+ D NTL +C+ G+ A ++ MV G+ P+ T++
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNI 399
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
L+D LC ++ +A ++ Y ++ C + A++L + KG
Sbjct: 400 LLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Query: 368 FLPDFVT 374
PD +T
Sbjct: 460 VSPDVIT 466
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 167/410 (40%), Gaps = 79/410 (19%)
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ DA+ +F M + P V + L+ K + E + + GI + +++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
LIDC C RLS A +M+ G P + +LV +C V F +A L D+++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
G + P++V YN +I C G+V AL +L+ M +M + PD V+YN +I+
Sbjct: 179 G--------YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT--- 227
Query: 427 KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMK-GLS-DEVNYNSVINAYCAEGEVSKA 484
+ F G GV + S +M+ G+S D + ++++I+ Y EG++ +A
Sbjct: 228 ------RLFH--------SGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 485 LILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE 544
KK Y+ +I+
Sbjct: 274 ---------------------------KKQ------------------------YNEMIQ 282
Query: 545 NCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDK 604
N + L G + GL +EA VLN ++ + P+ YN LI +C+ + VD
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 605 AYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNIN 654
+ M G F+ L + G+ + +V+ ++ SC ++
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV-SCGVH 391
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 152/599 (25%), Positives = 266/599 (44%), Gaps = 72/599 (12%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQN--------DNAYKVLSEMVNSGF 91
+G L ++ M R G++P +LL C+ + + A + L M G
Sbjct: 255 AGQLRDALKVLTLMQRAGVEP------NLLICNTTIDVFVRANRLEKALRFLERMQVVGI 308
Query: 92 LPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEE 148
+P+V TYN ++ YC RV+EA+ +L M + P+ VS+ T++ LC ++RI E +
Sbjct: 309 VPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
Query: 149 LLQEM-NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHL 207
L+++M GL PD VTYNTLI ++K+ + A+ +++ + Y++++H
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDH-ADEALWFLKDAQEKGFRIDKLGYSAIVHA 427
Query: 208 LCTY-NVDKAYKVFTEMIASGF-EPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
LC + +A + EM++ G P +VTY +++ +C V A + + M G P
Sbjct: 428 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 487
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
+ V L+ C+ G+ +A EM E PN+ TYS ++ L + +LSEA D+
Sbjct: 488 NTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVV 547
Query: 326 REMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNA 385
REM+ G P L+ + C G +A +E ++KG + ++V +
Sbjct: 548 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG--------CAINVVNFTT 599
Query: 386 LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+I+G C ++ AL +L M ++ D +Y ++ K G + +A ELM +M
Sbjct: 600 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKM---- 655
Query: 446 GIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYI 504
L KG+ V Y +VI+ YC G+V + + ++M R +Y
Sbjct: 656 ------------LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRT--IYN 701
Query: 505 MLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTL----IENCSNNEFKSVVELAKG 560
+ + LC DTL + S ++ K+ L +G
Sbjct: 702 QVIE--------------------KLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEG 741
Query: 561 FGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFAS 619
+ +G+ A V + N PD + L + VD+A + + +V G S
Sbjct: 742 YLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHIS 800
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 195/439 (44%), Gaps = 43/439 (9%)
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
++KA + M G P++VTYN +I YC RV++A+ + M +G PD V T
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 273 LITFFCKYGELEKAFEMRAEMV-ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
++ + CK + + ++ +M E G++P+ TY+ LI L EA ++
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
G + Y +V A C G S+A L +EM+ KG P P +VTY A++ G C
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP-------PDVVTYTAVVNGFC 465
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
LG V++A +L+ M P+ VSY +++G C+ G+ +A E+M +E
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS---- 521
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
+ + Y+ +++ EG++S+A + EM G V +L
Sbjct: 522 -----------PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Query: 512 KKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNN--EFKSVVELAKGFGMRGLKNE 569
+ RT A++ F + L + C+ N F +V+ GF +
Sbjct: 571 RDGRTHEARK---------------FMEECLNKGCAINVVNFTTVIH---GFCQNDELDA 612
Query: 570 AASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIK 629
A SVL+ + N D Y L+ ++ + +A + +M+H G + +I
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Query: 630 ALFHVGRHNEVRRVIQNVL 648
+G+ +++ +++ ++
Sbjct: 673 RYCQMGKVDDLVAILEKMI 691
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 181/433 (41%), Gaps = 39/433 (9%)
Query: 197 PWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
P Y+ L L T + +V M G + ++ ++ +Y +++DA+ +
Sbjct: 207 PMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLT 266
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
M G+ P+ +ICNT I F + LEKA M GI+PN TY+ +I C
Sbjct: 267 LMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLH 326
Query: 317 RLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK-GFLPDFVTE 375
R+ EA +L +M G P + +Y+ ++G C + L +M + G +PD
Sbjct: 327 RVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD---- 382
Query: 376 FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF 435
VTYN LI+ +EAL L+ E D + Y+ ++ CK G + +A
Sbjct: 383 ----QVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438
Query: 436 ELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
+L+ EM G D V Y +V+N +C GEV KA L M HG
Sbjct: 439 DLINEMLSKGHCP--------------PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Query: 496 SLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVV 555
+V Y L +G + ++ A+E ++ M + S + TY ++
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEARE-MMNMSEEHWWSPNSITYSVIMH----------- 532
Query: 556 ELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHY 615
G G +EA V+ ++ + P N L+ CR +A E ++
Sbjct: 533 ----GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 588
Query: 616 GFASHMFSVLALI 628
G A ++ + +I
Sbjct: 589 GCAINVVNFTTVI 601
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 134/331 (40%), Gaps = 45/331 (13%)
Query: 353 FSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLS 412
+S+A LRD + + E P+L+ N I R+E+AL L M + +
Sbjct: 252 YSRAGQLRDALKVLTLMQRAGVE--PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIV 309
Query: 413 PDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVI 472
P+ V+YN +I G+C L + +A EL+ +M G L D+V+Y +++
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGC---------------LPDKVSYYTIM 354
Query: 473 NAYCAEGEVSKALILHDEM-EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLC 531
C E + + L +M + HG + V Y L K A E+L ++
Sbjct: 355 GYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH---ADEAL---WFLKD 408
Query: 532 TSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNY-KPDGAVYN 590
F D L + ++V G +EA ++N +L + PD Y
Sbjct: 409 AQEKGFRIDKL-------GYSAIVH---ALCKEGRMSEAKDLINEMLSKGHCPPDVVTYT 458
Query: 591 FLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVI------ 644
++ CR VDKA + M +G + S AL+ + G+ E R ++
Sbjct: 459 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH 518
Query: 645 ----QNVLRSCNINGFELHKALSETGVIVRE 671
++ S ++G LSE +VRE
Sbjct: 519 WWSPNSITYSVIMHGLRREGKLSEACDVVRE 549
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 235/517 (45%), Gaps = 63/517 (12%)
Query: 42 GLLKTTTTV-SEMNRKGLDPARES--LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATY 98
GL++ V EM+ +G+ P S L+ + C + A + L+ M+ GF+P AT
Sbjct: 196 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC 255
Query: 99 NVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
++L A C + V+ A+ R M +PN+++F ++IDGLC K IK+A E+L+EM
Sbjct: 256 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 315
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDK 215
G P+ T+ LI + K WT +K
Sbjct: 316 NGWKPNVYTHTALIDGLCKR---------------------GWT--------------EK 340
Query: 216 AYKVFTEMIASG-FEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
A+++F +++ S ++P++ TY +I YC D++ A +F M ++GL P+ TLI
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
CK G +A+E+ M + G +PN TY+ ID LC + R EA++L + GL
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
Y L+ C + ++A M GF D + N LI C
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD--------MRLNNILIAAFCRQK 512
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAV 454
+++E+ + + + + L P +Y +IS +CK G++ A + M G + D
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVP--DSFT 570
Query: 455 FSSLMKGLS-----DEVN--YNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
+ SL+ GL DE Y ++I+ + EV++ + ++ + + S A ++L
Sbjct: 571 YGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA----MILL 626
Query: 508 DGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE 544
+ DKK R + + ++ + + + L+E
Sbjct: 627 EPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLE 663
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 209/476 (43%), Gaps = 36/476 (7%)
Query: 101 LLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
+L + R++EA+G++ M + P+ ++ N V++ I+ AE + EM+ +G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKA 216
+ PDS +Y ++ ++ + L +++ IP T T ++ LC V++A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDN-ATCTLILTALCENGLVNRA 271
Query: 217 YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
F +MI GF+P+L+ + LI C + ++ A + M G P+ LI
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 277 FCKYGELEKAFEMRAEMVERGIL-PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSP 335
CK G EKAF + ++V PN TY+ +I C + +L+ A LF M GL P
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 336 REYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGR 395
Y L+ +C G F +A+ L + M +GF+P+ + TYNA I C R
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN--------IYTYNAAIDSLCKKSR 443
Query: 396 VEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG-----GIRGV 450
EA +L L D V+Y I+I CK ++ +A M++ G + +
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI 503
Query: 451 DLAVFSSLMKGLSDEV---------------NYNSVINAYCAEGEVSKALILHDEMEHHG 495
+A F K E Y S+I+ YC EG++ AL M+ HG
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Query: 496 SLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLI-ENCSNNE 550
+ S Y L G KK+ A + L D S P T TL E C N+
Sbjct: 564 CVPDSFTYGSLISGLCKKSMVDEACK-LYEAMIDRGLSPPEVTRVTLAYEYCKRND 618
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 207/498 (41%), Gaps = 80/498 (16%)
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
R+ EA ++ +M ++GL P S+T N ++ + + L
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLE--------IAVELGL---------------- 197
Query: 202 TSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD-RVQDAMGIFRGMPD 260
++ A VF EM G P +Y ++ C RD ++Q+A GM
Sbjct: 198 -----------IEYAENVFDEMSVRGVVPDSSSYKLMVIG-CFRDGKIQEADRWLTGMIQ 245
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
RG PD C ++T C+ G + +A +M++ G PN ++ LID LC + + +
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
AF++ EM+ G P Y + L+ C G KAF L +++ + P++
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD-------TYKPNV 358
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
TY ++I G C ++ A + M E L P+ +Y +I+G CK G G+A+ELM
Sbjct: 359 HTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNL 418
Query: 441 MDEAGGIRGVDL--AVFSSLMK-----------------GL-SDEVNYNSVINAYCAEGE 480
M + G + + A SL K GL +D V Y +I C + +
Sbjct: 419 MGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQND 478
Query: 481 VSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYD 540
+++AL M G L +L F ++ + + + E L ++ L TY
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES-ERLFQLVVSLGLIPTKETYT 537
Query: 541 TLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRR 600
++I +C E G + A + + + PD Y LI C++
Sbjct: 538 SMI-SCYCKE--------------GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS 582
Query: 601 NVDKAYNMYMEMVHYGFA 618
VD+A +Y M+ G +
Sbjct: 583 MVDEACKLYEAMIDRGLS 600
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 163/337 (48%), Gaps = 10/337 (2%)
Query: 41 GGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSG-FLPSVA 96
G + + + EM R G P +LI LC + + A+++ ++V S + P+V
Sbjct: 301 GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC-KRGWTEKAFRLFLKLVRSDTYKPNVH 359
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
TY ++ YC++ +++ A + M + PNV ++ T+I+G C A EL+ M
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN- 212
+G P+ TYN I ++ K + A L ++ + TYT LI C N
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSR-APEAYELLNKAFSCGLEADGVTYTILIQEQCKQND 478
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+++A F M +GFE + N LI A+C + +++++ +F+ + GL P +
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
+I+ +CK G+++ A + M G +P++ TY LI LC + + EA L+ M+ G
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
LSP E L YC + + A L + + K ++
Sbjct: 599 LSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWI 635
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 172/402 (42%), Gaps = 38/402 (9%)
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
R+ +A+G+ M ++GLTP ++ N ++ + G +E A + EM RG++P++ +Y
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
++ ++ EA M+ G P ++ A C G ++A +MI
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
G F P+L+ + +LI G C G +++A +L M P+ ++ +I G C
Sbjct: 282 G--------FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 427 KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALI 486
K G KAF L +++ + + + Y S+I YC E ++++A +
Sbjct: 334 KRGWTEKAFRLFLKLVRSDTYK--------------PNVHTYTSMIGGYCKEDKLNRAEM 379
Query: 487 LHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENC 546
L M+ G Y L +G KA + G L+ + D +TY+ I++
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLING-HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS- 437
Query: 547 SNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAY 606
L K + EA +LN + DG Y LI E C++ ++++A
Sbjct: 438 ----------LCK----KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483
Query: 607 NMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL 648
+ M GF + M LI A + E R+ Q V+
Sbjct: 484 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVV 525
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 179/440 (40%), Gaps = 45/440 (10%)
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+++A + +M G PS +T N ++ ++ A +F M RG+ PD+
Sbjct: 163 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
++ + G++++A M++RG +P+ T + ++ LC ++ A FR+M+ G
Sbjct: 223 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
P + +L+ C G +AF + +EM+ G + P++ T+ ALI G C
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG--------WKPNVYTHTALIDGLCK 334
Query: 393 LGRVEEALGI-LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
G E+A + L+ + + P+ +Y +I G+CK +L +A L M E G V+
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
Y ++IN +C G +A L + M G + Y D
Sbjct: 395 ---------------TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC 439
Query: 512 KKARTRGAKESLLRMFYDLCTSLPTFTYDTLI-ENCSNNEFKSVVE-------------- 556
KK+R A E LL + TY LI E C N+ +
Sbjct: 440 KKSRAPEAYE-LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADM 498
Query: 557 -----LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYME 611
L F + E+ + V+ P Y +I +C+ ++D A +
Sbjct: 499 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558
Query: 612 MVHYGFASHMFSVLALIKAL 631
M +G F+ +LI L
Sbjct: 559 MKRHGCVPDSFTYGSLISGL 578
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 163/636 (25%), Positives = 268/636 (42%), Gaps = 113/636 (17%)
Query: 85 EMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKR 141
EMV G V +Y++L+ ++ V+EA+G+L M VEPN++++ +I GLC
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
+++EA L + S G+ D Y TLI + + NL RA ++ M+Q+ I TY
Sbjct: 327 KLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN-RAFSMLGDMEQRGIQPSILTY 385
Query: 202 TSLIHLLC--------------------TY-----------NVDKAYKVFTEMIASGFEP 230
++I+ LC TY N+D ++ + +
Sbjct: 386 NTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPM 445
Query: 231 SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMR 290
LV N L+ A+ +A ++R MP+ LTPD T+I +CK G++E+A EM
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Query: 291 AEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL-----SPRE-------- 337
E+ + + A Y+++ID LC + L A ++ E+ GL + R
Sbjct: 506 NEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHAN 564
Query: 338 ----------YAYFNLVGAYCL------------VGEFSKAFHLRDEMIHKGFLPDFVTE 375
Y L CL G F A + M KG F +
Sbjct: 565 GGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPST 624
Query: 376 FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV-SYNIVISGFCKLGELGKA 434
+LV R +A ++ E +LS DV Y I+I+G CK G L KA
Sbjct: 625 ILKTLVDNL----------RSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKA 674
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
L RGV L + + YNS+IN C +G + +AL L D +E+
Sbjct: 675 LNLC----SFAKSRGVTL-----------NTITYNSLINGLCQQGCLVEALRLFDSLENI 719
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSV 554
G + + V Y +L D K+ +F D L + L+ N + S+
Sbjct: 720 GLVPSEVTYGILIDNLCKEG-----------LFLDAEKLLDSMVSKGLVPNIII--YNSI 766
Query: 555 VELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
V+ G+ G +A V++ + PD + +I +C++ ++++A +++ E
Sbjct: 767 VD---GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKD 823
Query: 615 YGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
++ F L LIK GR E R +++ +L S
Sbjct: 824 KNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 249/579 (43%), Gaps = 69/579 (11%)
Query: 76 NDNAYKVLSEMVN-----SGFLPSVATYNVLLHAYCRDKRVDEAMGIL------RGMAVE 124
N N Y+ + +N + P + L+H + R D + G+L R
Sbjct: 73 NLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSI-TRDDPSKGLLILRDCLRNHGAF 131
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL--APDSVTYNTLITAMSKNTNLVIRA 182
P+ ++F ++I K + A E+L+ M +K + D+ + +I+ K + A
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPEL-A 190
Query: 183 IALYDQMKQQRIPVP-WTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIH 240
+ ++ + VP TYT+L+ LC VD+ + + GFE V Y+ IH
Sbjct: 191 LGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIH 250
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
Y + DA+ R M ++G+ D V + LI K G +E+A + +M++ G+ P
Sbjct: 251 GYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEP 310
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
N TY+ +I LC +L EAF LF +L G+ E+ Y L+ C G ++AF +
Sbjct: 311 NLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML 370
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
+M +G PS++TYN +I G C+ GRV EA + +G+ D ++Y+
Sbjct: 371 GDMEQRG--------IQPSILTYNTVINGLCMAGRVSEADEVSKGVV-----GDVITYST 417
Query: 421 VISGFCKLGELGKAFELMVEMDEAG------------------GIRGVDLAVFSSL--MK 460
++ + K+ + E+ EA G G A++ ++ M
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD 477
Query: 461 GLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAK 520
D Y ++I YC G++ +AL + +E+ S+ A+V Y + D KK A
Sbjct: 478 LTPDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTAT 536
Query: 521 ESLLRMFYDLCTSLPTFTYDTLIENC-SNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQ 579
E L+ + ++ L T TL+ + +N K ++ L G Q
Sbjct: 537 EVLIEL-WEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE----------------Q 579
Query: 580 WNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFA 618
N + N I+ C+R + + A +YM M G
Sbjct: 580 LNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT 618
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 189/423 (44%), Gaps = 37/423 (8%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFN 131
+ D Y+ + EM P ATY ++ YC+ +++EA+ + LR +V V +N
Sbjct: 465 EADALYRAMPEM---DLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYN 520
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
+ID LC K + A E+L E+ KGL D T TL+ ++ N + L ++Q
Sbjct: 521 RIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG-DKGILGLVYGLEQ 579
Query: 192 QRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD-RVQ 249
V I LLC + + A +V+ M G VT+ I + R
Sbjct: 580 LNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT---VTFPSTILKTLVDNLRSL 636
Query: 250 DAMGIFRGMPDRGLTP-DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
DA + + L+ D + +I CK G L KA + + RG+ N TY+ L
Sbjct: 637 DAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSL 696
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
I+ LC Q L EA LF + GL P E Y L+ C G F A L D M+ KG
Sbjct: 697 INGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL 756
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
+P+ ++ YN+++ G C LG+ E+A+ ++ ++PD + + +I G+CK
Sbjct: 757 VPN--------IIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKK 808
Query: 429 GELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILH 488
G++ +A + E + D F L+KG +C +G + +A L
Sbjct: 809 GDMEEALSVFTEFKDKN--ISADFFGFLFLIKG-------------FCTKGRMEEARGLL 853
Query: 489 DEM 491
EM
Sbjct: 854 REM 856
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 124/531 (23%), Positives = 207/531 (38%), Gaps = 105/531 (19%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSF 130
C + + A+ +L +M G PS+ TYN +++ C RV EA + +G V +V+++
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKG--VVGDVITY 415
Query: 131 NTVIDG----------LCAKRRI-------------------------KEAEELLQEMNS 155
+T++D L +RR EA+ L + M
Sbjct: 416 STLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPE 475
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VD 214
L PD+ TY T+I K T + A+ +++++++ + Y +I LC +D
Sbjct: 476 MDLTPDTATYATMIKGYCK-TGQIEEALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLD 533
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI--CNT 272
A +V E+ G + T L+H+ + +G+ G+ L D + N
Sbjct: 534 TATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQ--LNSDVCLGMLND 591
Query: 273 LITFFCKYGELEKAFEMRAEMVERGI--------------------------------LP 300
I CK G E A E+ M +G+ L
Sbjct: 592 AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLS 651
Query: 301 NADT--YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
+ D Y+ +I+ LC + L +A +L G++ Y +L+ C G +A
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
L D + + G + PS VTY LI C G +A +L M L P+ + Y
Sbjct: 712 LFDSLENIGLV--------PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIY 763
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG--LSDEVNYNSVINAYC 476
N ++ G+CKLG+ A + V S M G D +S+I YC
Sbjct: 764 NSIVDGYCKLGQTEDA-----------------MRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 477 AEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMF 527
+G++ +AL + E + ++ L GF K R A+ L M
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 157/395 (39%), Gaps = 52/395 (13%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSF 130
C + D A +VL E+ G + T LLH+ + +G++ G+ + V
Sbjct: 527 CKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCL 586
Query: 131 NTVIDG---LCAKRRIKEAEELLQEMNSKGL----------------------------- 158
+ D LC + + A E+ M KGL
Sbjct: 587 GMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAG 646
Query: 159 -----APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN- 212
+ D + Y +I + K +++A+ L K + + + TY SLI+ LC
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKE-GFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGC 705
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+ +A ++F + G PS VTY LI C DA + M +GL P+ +I N+
Sbjct: 706 LVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNS 765
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
++ +CK G+ E A + + + + P+A T S +I C + + EA +F E
Sbjct: 766 IVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKN 825
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV---TYNALIYG 389
+S + + L+ +C G +A L EM+ + + L + +
Sbjct: 826 ISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVE 885
Query: 390 NCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
C GRV +A+ IL D++S I SG
Sbjct: 886 LCEQGRVPQAIKIL----------DEISSTIYPSG 910
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 174/434 (40%), Gaps = 49/434 (11%)
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
++ SGF P+L + + + + + + + + + + I + + F
Sbjct: 17 LLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNR 76
Query: 283 LEKAFE-MRAEMVERGILPNADTYSKLIDCLCPQRR-LSEAFDLFREML-GGGLSPREYA 339
E A + + + + I P LI R S+ + R+ L G P
Sbjct: 77 YEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLT 136
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEMIHKGF---LPDFVTEFSPSLVTYNALIYGNCLLGRV 396
+ +L+ + GE A + + M +K +FV +A+I G C +G+
Sbjct: 137 FCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVC---------SAVISGFCKIGKP 187
Query: 397 EEALGILRGMAEMS-LSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVF 455
E ALG + L P+ V+Y ++S C+LG++ + +L+ +++ G F
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEG---------F 238
Query: 456 SSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKAR 515
D V Y++ I+ Y G + AL+ EM G R V Y +L DG K+
Sbjct: 239 EF------DCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292
Query: 516 TRGAKESLLRMFYD-LCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVL 574
A L +M + + +L T+T + +G G EA +
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYT-----------------AIIRGLCKMGKLEEAFVLF 335
Query: 575 NTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHV 634
N +L + D +Y LI CR+ N+++A++M +M G + + +I L
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Query: 635 GRHNEVRRVIQNVL 648
GR +E V + V+
Sbjct: 396 GRVSEADEVSKGVV 409
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV 123
SLI+ LC Q A ++ + N G +PS TY +L+ C++ +A +L M
Sbjct: 695 SLINGLC-QQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753
Query: 124 E---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
+ PN++ +N+++DG C + ++A ++ + PD+ T +++I K ++
Sbjct: 754 KGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDME- 812
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIAS 226
A++++ + K + I + + LI CT +++A + EM+ S
Sbjct: 813 EALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVS 859
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 202/453 (44%), Gaps = 61/453 (13%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGL 137
+V MV G + V L A + +R+D + I R M V+ V S V++GL
Sbjct: 175 RVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGL 234
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL-----VIRAI--------- 183
C + ++++++L++E + KG+ P++ TYNT+I A K + V++ +
Sbjct: 235 CRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNK 294
Query: 184 --------------------ALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTE 222
L+D+M+++ I YTSLI C N+ +A+ +F E
Sbjct: 295 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
+ G PS TY LI C + A + M +G+ V+ NTLI +C+ G
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
+++A + M ++G + T + + C +R EA M+ GG+ +Y N
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
L+ YC G +A L EM KG P+ +TYN +IY C G+++EA +
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKG--------VQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
M + PD +Y +I G C + +A L EM G++G+D
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM----GLKGLD----------- 571
Query: 463 SDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
+ V Y +I+ G+ +A L+DEM+ G
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 210/491 (42%), Gaps = 45/491 (9%)
Query: 144 KEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTS 203
+E + M KGL+ D + + A K + + + ++ +M + + + T
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDL-CLEIFRRMVDSGVKITVYSLTI 229
Query: 204 LIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG 262
++ LC V+K+ K+ E G +P TYN +I+AY + G+ + M G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 263 LTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
+ + V L+ K G++ A ++ EM ERGI + Y+ LI C + + AF
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 323 DLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVT 382
LF E+ GLSP Y Y L+ C VGE A L +EM KG + + V
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG--------VNITQVV 401
Query: 383 YNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
+N LI G C G V+EA I M + D + N + S F +L +A + + M
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 443 EAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVL 502
E GV L+ V+Y ++I+ YC EG V +A L EM G ++
Sbjct: 462 EG----GVKLST-----------VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT 506
Query: 503 YIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP-TFTYDTLIE-NCSNNEFKSVVELAKG 560
Y ++ + K+ + + A++ LR + P ++TY +LI C + + L
Sbjct: 507 YNVMIYAYCKQGKIKEARK--LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 561 FGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASH 620
G++GL + + Y +I + D+A+ +Y EM G+
Sbjct: 565 MGLKGLDQNSVT----------------YTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Query: 621 MFSVLALIKAL 631
ALI ++
Sbjct: 609 NKVYTALIGSM 619
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 144/300 (48%), Gaps = 9/300 (3%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTVI 134
+A K+ EM G V Y L+ CR + A + L + P+ ++ +I
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ--- 191
DG+C + AE L+ EM SKG+ V +NTLI + +V A +YD M+Q
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK-GMVDEASMIYDVMEQKGF 430
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
Q T S + L Y D+A + M+ G + S V+Y LI YC V++A
Sbjct: 431 QADVFTCNTIASCFNRLKRY--DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+F M +G+ P+A+ N +I +CK G++++A ++RA M G+ P++ TY+ LI
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
C + EA LF EM GL Y ++ G+ +AF L DEM KG+ D
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 190/447 (42%), Gaps = 46/447 (10%)
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
++ +VF M+ G + + A R R+ + IFR M D G+ +
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
+ C+ GE+EK+ ++ E +GI P A TY+ +I+ QR S + + M G+
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
+ Y L+ G+ S A L DEM +G D + Y +LI NC
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD--------VHVYTSLISWNCRK 342
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA 453
G ++ A + + E LSP +Y +I G CK+GE+G A LM EM +GV++
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS----KGVNIT 398
Query: 454 VFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYI-MLFDGFDK 512
+V +N++I+ YC +G V +A +++D ME G +A V + F++
Sbjct: 399 -----------QVVFNTLIDGYCRKGMVDEASMIYDVMEQKG-FQADVFTCNTIASCFNR 446
Query: 513 KARTRGAKESLLRMFYDLCTSLPTFTYDTLIE-NCSNNEFKSVVELAKGFGMRGLKNEA- 570
R AK+ L RM + L T +Y LI+ C + L +G++ A
Sbjct: 447 LKRYDEAKQWLFRMM-EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAI 505
Query: 571 -----------------ASVLNTVLQWN-YKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
A L ++ N PD Y LI C NVD+A ++ EM
Sbjct: 506 TYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM 565
Query: 613 VHYGFASHMFSVLALIKALFHVGRHNE 639
G + + +I L G+ +E
Sbjct: 566 GLKGLDQNSVTYTVMISGLSKAGKSDE 592
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 166/343 (48%), Gaps = 13/343 (3%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVI 134
+A + +M+ +V +N L+ +CR R DEA+ + R M + +P+V +F TV+
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+ R++EA L M GL PD++ Y TLI A K+ I + L+D M++ +I
Sbjct: 539 RVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI-GLQLFDLMQRNKI 597
Query: 195 PVPWTTYTSLIHLLCT-YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
+IHLL + ++ A K F +I EP +VTYN +I YC R+ +A
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
IF + P+ V LI CK +++ A M + M E+G PNA TY L+D
Sbjct: 658 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 717
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
+ +F LF EM G+SP +Y ++ C G +A ++ + I LPD
Sbjct: 718 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD-- 775
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
+V Y LI G C +GR+ EA + M + PDD+
Sbjct: 776 ------VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/563 (24%), Positives = 252/563 (44%), Gaps = 50/563 (8%)
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
PNVV+F T+I+G C + + A +L + M +G+ PD + Y+TLI K ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK-AGMLGMGHK 342
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
L+ Q + + + ++S I + + ++ A V+ M+ G P++VTY LI C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
R+ +A G++ + RG+ P V ++LI FCK G L F + +M++ G P+
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
Y L+D L Q + A +MLG + + +L+ +C + F +A + M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS 423
G PD + T+ ++ + + GR+EEAL + M +M L PD ++Y +I
Sbjct: 523 GIYGIKPD--------VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 424 GFCKLGE--LG-KAFELMVEMDEAGGIRGVDLAV---------------FSSLMKGL--S 463
FCK + +G + F+LM + I ++ + F++L++G
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 464 DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESL 523
D V YN++I YC+ + +A + + ++ +V +L K GA
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA---- 690
Query: 524 LRMFYDLCT--SLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWN 581
+RMF + S P + + C + F V++ F + + +
Sbjct: 691 IRMFSIMAEKGSKP----NAVTYGCLMDWFSKSVDIEGSF----------KLFEEMQEKG 736
Query: 582 YKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVR 641
P Y+ +I C+R VD+A N++ + + + + LI+ VGR E
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Query: 642 RVIQNVLRSCNINGFELHKALSE 664
+ +++LR+ L +ALSE
Sbjct: 797 LLYEHMLRNGVKPDDLLQRALSE 819
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 145/639 (22%), Positives = 270/639 (42%), Gaps = 72/639 (11%)
Query: 30 SLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMV-N 88
SLESEP +E++ G DP+ ++ H+L + + D A KV EM+ N
Sbjct: 78 SLESEPNSALK------YFRWAEIS--GKDPSFYTIAHVLIRNGM-FDVADKVFDEMITN 128
Query: 89 SG----FLPSVATYNV-------LLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTV---I 134
G L S+ ++ L+ CR VD+A+ I V+ ++V +
Sbjct: 129 RGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML 188
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+ L R+ + ++ G+ P V+ + + V +A+ + + ++
Sbjct: 189 NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGF 248
Query: 195 PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
V + ++ L ++ A ++ + ++ G P++VT+ LI+ +C R + A +
Sbjct: 249 RVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F+ M RG+ PD + +TLI + K G L ++ ++ + +G+ + +S ID
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
L+ A +++ ML G+SP Y L+ C G +AF + +++ +G
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG------- 421
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
PS+VTY++LI G C G + + M +M PD V Y +++ G K G + A
Sbjct: 422 -MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGL----------------------SDEVNYNSVI 472
V+M G +++ VF+SL+ G D + +V+
Sbjct: 481 MRFSVKM--LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 473 NAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCT 532
EG + +AL L M G ++ Y L D F K K ++ +DL
Sbjct: 539 RVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH-----MKPTIGLQLFDLMQ 593
Query: 533 SLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFL 592
+ D + N V+ L F ++ +A+ N +++ +PD YN +
Sbjct: 594 R-NKISADIAVCNV-------VIHLL--FKCHRIE-DASKFFNNLIEGKMEPDIVTYNTM 642
Query: 593 IVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKAL 631
I +C R +D+A ++ + F + ++ LI L
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 130/555 (23%), Positives = 221/555 (39%), Gaps = 96/555 (17%)
Query: 150 LQEMNSKGLAPDSV-TYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL 208
L +NS+G + DS I+ K N + ++Y Q+ T+L+ L
Sbjct: 26 LNFLNSRGFSSDSAKALAAGISKAIKEGNFNLLDSSVYGSNLQR-------NETNLVLLS 78
Query: 209 CTYNVDKAYKVFTEMIASGFEPSLVTYNELI---HAYCCRDRVQDAMGIFRG-------- 257
+ A K F SG +PS T ++ + D+V D M RG
Sbjct: 79 LESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGS 138
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
+ DR L DA +C L+ C+YG ++KA E+ + G++ D+ ++++ L R
Sbjct: 139 IRDRSL--DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDR 196
Query: 318 LSEAFDLFREMLGGGLSPREYAY--FNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT- 374
+ D F ++ GG+ P + F L +C GE +KA ++ +GF V+
Sbjct: 197 VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFC-KGEVTKALDFHRLVMERGFRVGIVSC 255
Query: 375 -------------------------EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEM 409
+P++VT+ LI G C G ++ A + + M +
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 410 SLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS------------ 457
+ PD ++Y+ +I G+ K G LG +L + G +D+ VFSS
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG--VKLDVVVFSSTIDVYVKSGDLA 373
Query: 458 ---------LMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
L +G+S + V Y +I C +G + +A ++ ++ G + V Y L
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433
Query: 508 DGFDKKARTRGA---KESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMR 564
DGF K R E +++M Y P D +I L G +
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGY------PP---DVVIYGV----------LVDGLSKQ 474
Query: 565 GLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSV 624
GL A +L + + + V+N LI CR D+A ++ M YG + +
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 625 LALIKALFHVGRHNE 639
+++ GR E
Sbjct: 535 TTVMRVSIMEGRLEE 549
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 8/214 (3%)
Query: 65 LIHLLC-CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV 123
+IHLL C ++++ A K + ++ P + TYN ++ YC +R+DEA I + V
Sbjct: 607 VIHLLFKCHRIED--ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 124 EP---NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
P N V+ +I LC + A + M KG P++VTY L+ SK+ + +
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD-IE 723
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELI 239
+ L+++M+++ I +Y+ +I LC VD+A +F + I + P +V Y LI
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
YC R+ +A ++ M G+ PD ++ L
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 157/624 (25%), Positives = 284/624 (45%), Gaps = 54/624 (8%)
Query: 14 RNSGMTRGFTAAAAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQ 73
R+S + + AG + +V LL+ T + GL + L+ L +
Sbjct: 81 RHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGL--VWDMLLFLSSRLR 138
Query: 74 LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTV 133
+ +D+ Y +L +M + S +YN +L+ + + D+ + + + + N +++TV
Sbjct: 139 MVDDSLY-ILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIK-DKNEHTYSTV 193
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+DGLC ++++++A L+ K + P V++N++++ K + + +K
Sbjct: 194 VDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGL 253
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+P + ++ LI+ LC ++ +A ++ ++M G EP VTYN L + + A
Sbjct: 254 VPSVY-SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT-YSKLIDC 311
+ R M D+GL+PD + L+ C+ G ++ + +M+ RG N+ S ++
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 372
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
LC R+ EA LF +M GLSP AY ++ C +G+F A L DEM K LP+
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
T+ AL+ G C G + EA +L + + D V YNIVI G+ K G +
Sbjct: 433 S--------RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
+A EL + E G V +NS+I YC +++A + D +
Sbjct: 485 EEALELFKVVIETGITPSV---------------ATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPT-FTYDTLI------- 543
+ +G + V Y L D + T+ E LR PT TY +
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDE--LRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 544 --ENCSNNEFKSVVELAKGFGMRGLKNEAAS----VLNTVLQWNYKPDGAVYNFLIVEHC 597
ENC++ + + E K G+R +++E NT++Q+ + F+ +E
Sbjct: 588 KHENCNHVLRERIFEKCKQ-GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 598 RRRNVDKA---YNMYME-MVHYGF 617
+ RN+D + YN+ ++ + YG+
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGY 670
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 225/506 (44%), Gaps = 39/506 (7%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D A ++ G +PSV ++N+L++ C + EA+ + M VEP+ V++N +
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
G I A E++++M KGL+PD +TY L+ + N+ + + L D + +
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 194 IPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ ++ LC T +D+A +F +M A G P LV Y+ +IH C + A+
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
++ M D+ + P++ L+ C+ G L +A + ++ G + Y+ +ID
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
+ EA +LF+ ++ G++P + +L+ YC ++A + D + G
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG----- 533
Query: 373 VTEFSPSLVTYNALI--YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGE 430
+PS+V+Y L+ Y NC G + + R M + P +V+Y+++ G C+ +
Sbjct: 534 ---LAPSVVSYTTLMDAYANC--GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Query: 431 LGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL---------SDEVNYNSVINAYCAEGEV 481
++ E +F +GL D++ YN++I C +
Sbjct: 589 HENCNHVLRE------------RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 636
Query: 482 SKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDT 541
S A + + M+ +S Y +L D R A +S + + SL F Y T
Sbjct: 637 SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA-DSFIYSLQEQNVSLSKFAYTT 695
Query: 542 LIE-NCSNNEFKSVVELAKGFGMRGL 566
LI+ +C + + V+L RG
Sbjct: 696 LIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 240/530 (45%), Gaps = 67/530 (12%)
Query: 129 SFNTVIDG--LCAKRRIKEA----EELLQE------MNSKGLAPDSVTYNTLITAMSKNT 176
SF+T++ L +RR KE E+LLQE S GL D + + +S
Sbjct: 84 SFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLF------LSSRL 137
Query: 177 NLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYN 236
+V ++ + +MK Q + V +Y S+++ DK + V+ E+ + + TY+
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF--RETDKMWDVYKEIK----DKNEHTYS 191
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER 296
++ C + +++DA+ R + + P V N++++ +CK G ++ A +++
Sbjct: 192 TVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC 251
Query: 297 GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
G++P+ +++ LI+ LC ++EA +L +M G+ P Y L + L+G S A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 357 FHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDD- 415
+ + +M+ KG SP ++TY L+ G C LG ++ L +L+ M +
Sbjct: 312 WEVIRDMLDKG--------LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 416 VSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAY 475
+ ++++SG CK G + +A L +M +A G+ D V Y+ VI+
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQM-KADGLS--------------PDLVAYSIVIHGL 408
Query: 476 CAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP 535
C G+ AL L+DEM L S + L G +K A+ SLL +L
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR-SLLDSLISSGETLD 467
Query: 536 TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVE 595
Y+ +I+ G+ G EA + V++ P A +N LI
Sbjct: 468 IVLYNIVID---------------GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 596 HCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRH---NEVRR 642
+C+ +N+ +A + + YG A + S L+ A + G +E+RR
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 191/472 (40%), Gaps = 90/472 (19%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESL------IHLLCCDQLQNDNAYKVLSEMVNSGFLPS 94
G + + S+MN+ G++P + HLL A++V+ +M++ G P
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG----MISGAWEVIRDMLDKGLSPD 326
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGM---AVEPN-VVSFNTVIDGLCAKRRIKEAEELL 150
V TY +LL C+ +D + +L+ M E N ++ + ++ GLC RI EA L
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLF 386
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT 210
+M + GL+PD V Y+ +I + K + A+ LYD+M +RI T+ +L+ LC
Sbjct: 387 NQMKADGLSPDLVAYSIVIHGLCKLGKFDM-ALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 211 -------------------------YNV-----------DKAYKVFTEMIASGFEPSLVT 234
YN+ ++A ++F +I +G PS+ T
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
+N LI+ YC + +A I + GL P V TL+ + G + E+R EM
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 295 ERGILPNADTYSKLIDCLCP------------QRRLSEAFDLFREMLGGGLSPREYAYFN 342
GI P TYS + LC +R + R+M G+ P + Y
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 343 LVGAYCLVGEFSKAFH-------------------LRDEMIHKGFL---PDFVTEF---- 376
++ C V S AF L D + G++ F+
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 377 -SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
S S Y LI +C+ G E A+ + + + Y+ VI+ C+
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 39/379 (10%)
Query: 18 MTRGFTAAAAAGSLESEPKKVTSGGLLKT------TTTVSEMNRKGLDP---ARESLIHL 68
++RGF + P V GL KT + ++M GL P A +IH
Sbjct: 354 LSRGFELNSII------PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 69 LCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEP--- 125
LC + D A + EM + LP+ T+ LL C+ + EA +L +
Sbjct: 408 LC-KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
++V +N VIDG I+EA EL + + G+ P T+N+LI K N + A +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN-IAEARKI 525
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLC----TYNVDKAYKVFTEMIASGFEPSLVTYNELIHA 241
D +K + +YT+L+ T ++D+ + EM A G P+ VTY+ +
Sbjct: 526 LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR---EMKAEGIPPTNVTYSVIFKG 582
Query: 242 YC-----------CRDRV-QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
C R+R+ + R M G+ PD + NT+I + C+ L AF
Sbjct: 583 LCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF 642
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL 349
M R + ++ TY+ LID LC + +A + +S ++AY L+ A+C+
Sbjct: 643 LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV 702
Query: 350 VGEFSKAFHLRDEMIHKGF 368
G+ A L +++H+GF
Sbjct: 703 KGDPEMAVKLFHQLLHRGF 721
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 53/233 (22%)
Query: 64 SLIHLLCCDQLQN-DNAYKVLSEMVNSGFLPSVATYNVLLHAYCR---DKRVDEAMGILR 119
SLI+ C + QN A K+L + G PSV +Y L+ AY K +DE ++
Sbjct: 508 SLIYGYC--KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 120 GMAVEPNVVSFNTVIDGLCA------------KRRIKEAEELLQEMNSKGLAPDSVTYNT 167
+ P V+++ + GLC +R ++ ++ L++M S+G+ PD +TYNT
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 168 LIT------------------------AMSKNTNLVIRAIALYD----------QMKQQR 193
+I A S N++I ++ +Y +++Q
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
+ + YT+LI C + + A K+F +++ GF S+ Y+ +I+ C R
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 157/624 (25%), Positives = 284/624 (45%), Gaps = 54/624 (8%)
Query: 14 RNSGMTRGFTAAAAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQ 73
R+S + + AG + +V LL+ T + GL + L+ L +
Sbjct: 81 RHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGL--VWDMLLFLSSRLR 138
Query: 74 LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTV 133
+ +D+ Y +L +M + S +YN +L+ + + D+ + + + + N +++TV
Sbjct: 139 MVDDSLY-ILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIK-DKNEHTYSTV 193
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+DGLC ++++++A L+ K + P V++N++++ K + + +K
Sbjct: 194 VDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGL 253
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+P + ++ LI+ LC ++ +A ++ ++M G EP VTYN L + + A
Sbjct: 254 VPSVY-SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT-YSKLIDC 311
+ R M D+GL+PD + L+ C+ G ++ + +M+ RG N+ S ++
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 372
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
LC R+ EA LF +M GLSP AY ++ C +G+F A L DEM K LP+
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
T+ AL+ G C G + EA +L + + D V YNIVI G+ K G +
Sbjct: 433 S--------RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
+A EL + E G V +NS+I YC +++A + D +
Sbjct: 485 EEALELFKVVIETGITPSV---------------ATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPT-FTYDTLI------- 543
+ +G + V Y L D + T+ E LR PT TY +
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDE--LRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 544 --ENCSNNEFKSVVELAKGFGMRGLKNEAAS----VLNTVLQWNYKPDGAVYNFLIVEHC 597
ENC++ + + E K G+R +++E NT++Q+ + F+ +E
Sbjct: 588 KHENCNHVLRERIFEKCKQ-GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 598 RRRNVDKA---YNMYME-MVHYGF 617
+ RN+D + YN+ ++ + YG+
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGY 670
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 225/506 (44%), Gaps = 39/506 (7%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D A ++ G +PSV ++N+L++ C + EA+ + M VEP+ V++N +
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
G I A E++++M KGL+PD +TY L+ + N+ + + L D + +
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 194 IPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ ++ LC T +D+A +F +M A G P LV Y+ +IH C + A+
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
++ M D+ + P++ L+ C+ G L +A + ++ G + Y+ +ID
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
+ EA +LF+ ++ G++P + +L+ YC ++A + D + G
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG----- 533
Query: 373 VTEFSPSLVTYNALI--YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGE 430
+PS+V+Y L+ Y NC G + + R M + P +V+Y+++ G C+ +
Sbjct: 534 ---LAPSVVSYTTLMDAYANC--GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Query: 431 LGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL---------SDEVNYNSVINAYCAEGEV 481
++ E +F +GL D++ YN++I C +
Sbjct: 589 HENCNHVLRE------------RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 636
Query: 482 SKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDT 541
S A + + M+ +S Y +L D R A +S + + SL F Y T
Sbjct: 637 SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA-DSFIYSLQEQNVSLSKFAYTT 695
Query: 542 LIE-NCSNNEFKSVVELAKGFGMRGL 566
LI+ +C + + V+L RG
Sbjct: 696 LIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 240/530 (45%), Gaps = 67/530 (12%)
Query: 129 SFNTVIDG--LCAKRRIKEA----EELLQE------MNSKGLAPDSVTYNTLITAMSKNT 176
SF+T++ L +RR KE E+LLQE S GL D + + +S
Sbjct: 84 SFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLF------LSSRL 137
Query: 177 NLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYN 236
+V ++ + +MK Q + V +Y S+++ DK + V+ E+ + + TY+
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF--RETDKMWDVYKEIK----DKNEHTYS 191
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER 296
++ C + +++DA+ R + + P V N++++ +CK G ++ A +++
Sbjct: 192 TVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC 251
Query: 297 GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
G++P+ +++ LI+ LC ++EA +L +M G+ P Y L + L+G S A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 357 FHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDD- 415
+ + +M+ KG SP ++TY L+ G C LG ++ L +L+ M +
Sbjct: 312 WEVIRDMLDKG--------LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 416 VSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAY 475
+ ++++SG CK G + +A L +M +A G+ D V Y+ VI+
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQM-KADGLS--------------PDLVAYSIVIHGL 408
Query: 476 CAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP 535
C G+ AL L+DEM L S + L G +K A+ SLL +L
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR-SLLDSLISSGETLD 467
Query: 536 TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVE 595
Y+ +I+ G+ G EA + V++ P A +N LI
Sbjct: 468 IVLYNIVID---------------GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 596 HCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRH---NEVRR 642
+C+ +N+ +A + + YG A + S L+ A + G +E+RR
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 191/472 (40%), Gaps = 90/472 (19%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESL------IHLLCCDQLQNDNAYKVLSEMVNSGFLPS 94
G + + S+MN+ G++P + HLL A++V+ +M++ G P
Sbjct: 271 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG----MISGAWEVIRDMLDKGLSPD 326
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGM---AVEPN-VVSFNTVIDGLCAKRRIKEAEELL 150
V TY +LL C+ +D + +L+ M E N ++ + ++ GLC RI EA L
Sbjct: 327 VITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLF 386
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT 210
+M + GL+PD V Y+ +I + K + A+ LYD+M +RI T+ +L+ LC
Sbjct: 387 NQMKADGLSPDLVAYSIVIHGLCKLGKFDM-ALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 211 -------------------------YNV-----------DKAYKVFTEMIASGFEPSLVT 234
YN+ ++A ++F +I +G PS+ T
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
+N LI+ YC + +A I + GL P V TL+ + G + E+R EM
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 295 ERGILPNADTYSKLIDCLCP------------QRRLSEAFDLFREMLGGGLSPREYAYFN 342
GI P TYS + LC +R + R+M G+ P + Y
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 343 LVGAYCLVGEFSKAFH-------------------LRDEMIHKGFL---PDFVTEF---- 376
++ C V S AF L D + G++ F+
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 377 -SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
S S Y LI +C+ G E A+ + + + Y+ VI+ C+
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 39/379 (10%)
Query: 18 MTRGFTAAAAAGSLESEPKKVTSGGLLKT------TTTVSEMNRKGLDP---ARESLIHL 68
++RGF + P V GL KT + ++M GL P A +IH
Sbjct: 354 LSRGFELNSII------PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 69 LCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEP--- 125
LC + D A + EM + LP+ T+ LL C+ + EA +L +
Sbjct: 408 LC-KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
++V +N VIDG I+EA EL + + G+ P T+N+LI K N + A +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN-IAEARKI 525
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLC----TYNVDKAYKVFTEMIASGFEPSLVTYNELIHA 241
D +K + +YT+L+ T ++D+ + EM A G P+ VTY+ +
Sbjct: 526 LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR---EMKAEGIPPTNVTYSVIFKG 582
Query: 242 YC-----------CRDRV-QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
C R+R+ + R M G+ PD + NT+I + C+ L AF
Sbjct: 583 LCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVF 642
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL 349
M R + ++ TY+ LID LC + +A + +S ++AY L+ A+C+
Sbjct: 643 LEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCV 702
Query: 350 VGEFSKAFHLRDEMIHKGF 368
G+ A L +++H+GF
Sbjct: 703 KGDPEMAVKLFHQLLHRGF 721
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 53/233 (22%)
Query: 64 SLIHLLCCDQLQN-DNAYKVLSEMVNSGFLPSVATYNVLLHAYCR---DKRVDEAMGILR 119
SLI+ C + QN A K+L + G PSV +Y L+ AY K +DE ++
Sbjct: 508 SLIYGYC--KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 120 GMAVEPNVVSFNTVIDGLCA------------KRRIKEAEELLQEMNSKGLAPDSVTYNT 167
+ P V+++ + GLC +R ++ ++ L++M S+G+ PD +TYNT
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 168 LIT------------------------AMSKNTNLVIRAIALYD----------QMKQQR 193
+I A S N++I ++ +Y +++Q
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
+ + YT+LI C + + A K+F +++ GF S+ Y+ +I+ C R
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 180/379 (47%), Gaps = 25/379 (6%)
Query: 52 EMNRKGLDPA---RESLIHLLC-CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
++ ++G++P+ SLI C C L++ + + +M+ G+ P V Y VL+ +
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRS--GFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 108 DKRVDEAMGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
+ AM + G ++ NVV FN++IDG C R EA ++ + M G+ PD T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 165 YNTLI------TAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT-YNVDKAY 217
+ T++ A K+ I + L+D M++ +I +IHLL + ++ A
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPTI-GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 592
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFF 277
K F +I EP +VTYN +I YC R+ +A IF + P+ V LI
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652
Query: 278 CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
CK +++ A M + M E+G PNA TY L+D + +F LF EM G+SP
Sbjct: 653 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 712
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+Y ++ C G +A ++ + I LPD +V Y LI G C +GR+
Sbjct: 713 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD--------VVAYAILIRGYCKVGRLV 764
Query: 398 EALGILRGMAEMSLSPDDV 416
EA + M + PDD+
Sbjct: 765 EAALLYEHMLRNGVKPDDL 783
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 216/529 (40%), Gaps = 72/529 (13%)
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
PNVV+F T+I+G C + + A +L + M +G+ PD + Y+TLI K ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK-AGMLGMGHK 342
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
L+ Q + + + ++S I + + ++ A V+ M+ G P++VTY LI C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
R+ +A G++ + RG+ P V ++LI FCK G L F + +M++ G P+
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
Y L+D L Q + A +MLG + + +L+ +C + F +A + M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 364 IHKGFLPDFVT---------------------------------EFSPSLVTYNALIYGN 390
G PD T + S + N +I+
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA---FELMVEMDEAGGI 447
R+E+A + E + PD V+YN +I G+C L L +A FEL+
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL--------- 633
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
+ F + V +I+ C ++ A+ + M GS +V Y L
Sbjct: 634 ---KVTPFG------PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Query: 508 DGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLK 567
D F K G+ + L + S +Y +I+ G RG
Sbjct: 685 DWFSKSVDIEGSFK-LFEEMQEKGISPSIVSYSIIID---------------GLCKRGRV 728
Query: 568 NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
+EA ++ + + PD Y LI +C+ + +A +Y M+ G
Sbjct: 729 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 166/742 (22%), Positives = 300/742 (40%), Gaps = 136/742 (18%)
Query: 30 SLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMV-N 88
SLESEP +E++ G DP+ ++ H+L + + D A KV EM+ N
Sbjct: 78 SLESEPNSALK------YFRWAEIS--GKDPSFYTIAHVLIRNGM-FDVADKVFDEMITN 128
Query: 89 SG----FLPSVATYNV-------LLHAYCRDKRVDEAMGIL-----RGMAVEPNVVSFNT 132
G L S+ ++ L+ CR VD+A+ I G+ + + S
Sbjct: 129 RGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQD--SVYR 186
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+++ L R+ + ++ G+ P V+ + + V +A+ + + ++
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 193 RIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
V + ++ L ++ A ++ + ++ G P++VT+ LI+ +C R + A
Sbjct: 247 GFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 253 GIFRGMPDRGLTPDAVICNTL-----------------------------------ITFF 277
+F+ M RG+ PD + +TL I +
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 278 CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
K G+L A + M+ +GI PN TY+ LI LC R+ EAF ++ ++L G+ P
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT------------------EFSPS 379
Y +L+ +C G F L ++MI G+ PD V FS
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 380 L---------VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI------SG 424
+ V +N+LI G C L R +EAL + R M + PD ++ V+
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546
Query: 425 FCKLGE--LG-KAFELMVEMDEAGGIRGVDLAV---------------FSSLMKGL--SD 464
FCK + +G + F+LM + I ++ + F++L++G D
Sbjct: 547 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Query: 465 EVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLL 524
V YN++I YC+ + +A + + ++ +V +L K GA +
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA----I 662
Query: 525 RMFYDLCT--SLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNY 582
RMF + S P + + C + F V++ F + + +
Sbjct: 663 RMFSIMAEKGSKP----NAVTYGCLMDWFSKSVDIEGSF----------KLFEEMQEKGI 708
Query: 583 KPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRR 642
P Y+ +I C+R VD+A N++ + + + + LI+ VGR E
Sbjct: 709 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 768
Query: 643 VIQNVLRSCNINGFELHKALSE 664
+ +++LR+ L +ALSE
Sbjct: 769 LYEHMLRNGVKPDDLLQRALSE 790
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 223/526 (42%), Gaps = 69/526 (13%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM--- 121
LIHLL + + A +V M+ GF PS+ TY+ L+ + + +D MG+L+ M
Sbjct: 194 LIHLLLKSRFCTE-AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL--- 178
++PNV +F I L +I EA E+L+ M+ +G PD VTY LI A+ L
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 179 ---------------VIRAIALYDQMKQQR----IPVPWT------------TYTSLIHL 207
+ I L D+ R + W+ T+T L+
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 208 LCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPD 266
LC N +A+ M G P+L TYN LI R+ DA+ +F M G+ P
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
A I ++ K G+ A E +M +GI PN + + L R EA +F
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492
Query: 327 EMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNAL 386
+ GL P Y ++ Y VGE +A L EM+ G PD ++ N+L
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD--------VIVVNSL 544
Query: 387 IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGG 446
I RV+EA + M EM L P V+YN +++G K G++ +A EL M + G
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 447 IRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIML 506
+ + +N++ + C EV+ AL + +M G + Y +
Sbjct: 605 P---------------PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 507 FDGFDKKARTRGA-------KESLLRMFYDLCTSLPTFTYDTLIEN 545
G K + + A K+ + F LCT LP +LIE+
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 170/686 (24%), Positives = 280/686 (40%), Gaps = 138/686 (20%)
Query: 60 PARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA--- 114
P R + I LL D D+ + SEM G +P V T+ +L+ A C+ EA
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 115 MGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK 174
+ ++R + PN+ ++NT+I GL R+ +A EL M S G+ P + TY I K
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 175 NTNLVIRAIALYDQMKQQRI-PVPWTTYTSLIHLL------------------------C 209
+ + V A+ +++MK + I P SL L
Sbjct: 446 SGDSV-SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 210 TYN-----------VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
TYN +D+A K+ +EM+ +G EP ++ N LI+ DRV +A +F M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRL 318
+ L P V NTL+ K G++++A E+ MV++G PN T++ L DCLC +
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 319 SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA---FHLRDEMIHKGFLPDFVT- 374
+ A + +M+ G P + Y ++ G+ +A FH ++++ PDFVT
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY----PDFVTL 680
Query: 375 -EFSPSLVT---------------YN-----ALIYGNCLLGRVEEALGILRGMAEMSLSP 413
P +V YN A ++ L+G + GI ++
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVS------ 734
Query: 414 DDVSYNIVISGFCKLGE--LGKAFELMVEMDEAGGIRGV------DLAV------FSSLM 459
S +V +G C+ G+ L + + G R + DL V ++ L+
Sbjct: 735 --FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792
Query: 460 KGL----------------------SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
GL D YN +++AY G++ + L+ EM H
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 498 RASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCT----SLPTFTYDTLIENCSNNEFKS 553
++ + ++ G K G + L ++YDL + S TY LI+
Sbjct: 853 ANTITHNIVISGLVKA----GNVDDALDLYYDLMSDRDFSPTACTYGPLID--------- 899
Query: 554 VVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMV 613
G G EA + +L + +P+ A+YN LI + D A ++ MV
Sbjct: 900 ------GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 614 HYGFASHMFSVLALIKALFHVGRHNE 639
G + + L+ L VGR +E
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDE 979
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 154/623 (24%), Positives = 257/623 (41%), Gaps = 98/623 (15%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTV 133
+ AY++L M + G P V TY VL+ A C +++D A + M +P+ V++ T+
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+D R + ++ EM G PD VT+ L+ A+ K N A D M+ Q
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG-EAFDTLDVMRDQG 393
Query: 194 IPVPWTTYTSLI-HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAY---------- 242
I TY +LI LL + +D A ++F M + G +P+ TY I Y
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 243 ----------------CC-----------RDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
C RDR +A IF G+ D GL PD+V N ++
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDR--EAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSP 335
+ K GE+++A ++ +EM+E G P+ + LI+ L R+ EA+ +F M L P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 336 REYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGR 395
Y L+ G+ +A L + M+ KG P+ +T+N L C
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG--------CPPNTITFNTLFDCLCKNDE 623
Query: 396 VEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVF 455
V AL +L M +M PD +YN +I G K G++ +A +M + + D
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK---LVYPDFVTL 680
Query: 456 SSLMKGL--------------------SDE---VNYNSVINAYCAEGEVSKALILHDEME 492
+L+ G+ +D+ + + +I + AE + A+ + +
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV 740
Query: 493 HHGSLR-ASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEF 551
+G R + + + K GA+ + DL TY+ LI +
Sbjct: 741 ANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD- 799
Query: 552 KSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYME 611
++E+A+ V V PD A YNFL+ + + +D+ + +Y E
Sbjct: 800 --MIEIAQ------------DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE 845
Query: 612 MVHY----GFASHMFSVLALIKA 630
M + +H + L+KA
Sbjct: 846 MSTHECEANTITHNIVISGLVKA 868
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 160/637 (25%), Positives = 260/637 (40%), Gaps = 106/637 (16%)
Query: 50 VSEMNRKGLDP---ARESLIHLLC-CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAY 105
+SEM G +P SLI+ L D++ D A+K+ M P+V TYN LL
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRV--DEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 106 CRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDS 162
++ ++ EA+ + GM + PN ++FNT+ D LC + A ++L +M G PD
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 163 VTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTE 222
TYNT+I + KN V A+ + QMK+ P T T L ++ ++ AYK+ T
Sbjct: 644 FTYNTIIFGLVKNGQ-VKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITN 702
Query: 223 MIAS-GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA-VICNTLITFFCKY 280
+ + +P+ + + +LI + + +A+ + G+ D I +I + CK+
Sbjct: 703 FLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKH 762
Query: 281 GELEKAFEMRAEMV-ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYA 339
+ A + + + G+ P TY+ LI L + A D+F ++ G P
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEM-------------------IHKGFLPDFVT------ 374
Y L+ AY G+ + F L EM + G + D +
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 375 ---EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
+FSP+ TY LI G GR+ EA + GM + P+ YNI+I+GF K GE
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
A L M + G +R D Y+ +++ C G V + L E+
Sbjct: 943 DAACALFKRMVKEG-VR--------------PDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEF 551
+ G V Y ++ +G K R E L +F ++ TS
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRL----EEALVLFNEMKTS------------------ 1025
Query: 552 KSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYME 611
RG+ PD YN LI+ V++A +Y E
Sbjct: 1026 ------------RGIT----------------PDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 612 MVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL 648
+ G ++F+ ALI+ G+ V Q ++
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 144/593 (24%), Positives = 236/593 (39%), Gaps = 93/593 (15%)
Query: 111 VDEAMGILRGMAVEPNVV----SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
D + + +A N+V + N +++ L +++E + M + + D+ TY
Sbjct: 98 TDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYL 157
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL-----CTYNVDKAYKVFT 221
T+ ++S L AL +M++ + +Y LIHLL CT +A +V+
Sbjct: 158 TIFKSLSVKGGLKQAPYALR-KMREFGFVLNAYSYNGLIHLLLKSRFCT----EAMEVYR 212
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYG 281
MI GF PSL TY+ L+ R + MG+ + M GL P+ I + G
Sbjct: 213 RMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 282 ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYF 341
++ +A+E+ M + G P+ TY+ LID LC R+L A ++F +M G P Y
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 342 N-----------------------------------LVGAYCLVGEFSKAFHLRDEMIHK 366
LV A C G F +AF D M +
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ 392
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
G LP+ L TYN LI G + R+++AL + M + + P +Y + I +
Sbjct: 393 GILPN--------LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 427 KLGELGKAFELMVEMDEAG---GIRGVDLAVFSSLMKG-----------------LSDEV 466
K G+ A E +M G I + +++S G + D V
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 467 NYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
YN ++ Y GE+ +A+ L EM +G ++ L + K R A + +RM
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 527 FYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDG 586
++ TY+TL+ G G G EA + ++Q P+
Sbjct: 565 -KEMKLKPTVVTYNTLL---------------AGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Query: 587 AVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNE 639
+N L C+ V A M +M+ G +F+ +I L G+ E
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 172/377 (45%), Gaps = 17/377 (4%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAY-CRDKRVDEAMGIL----RGMAVEPNVVSFN 131
DNA +V +G + V + Y C+ V A + + + V+P + ++N
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN 789
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
+I GL I+ A+++ ++ S G PD TYN L+ A K+ + LY +M
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK-IDELFELYKEMST 848
Query: 192 QRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIAS-GFEPSLVTYNELIHAYCCRDRVQ 249
T+ +I L+ NVD A ++ ++++ F P+ TY LI R+
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+A +F GM D G P+ I N LI F K GE + A + MV+ G+ P+ TYS L+
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM-IHKGF 368
DCLC R+ E F+E+ GL+P Y ++ +A L +EM +G
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
PD L TYN+LI + G VEEA I + L P+ ++N +I G+
Sbjct: 1029 TPD--------LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 429 GELGKAFELMVEMDEAG 445
G+ A+ + M G
Sbjct: 1081 GKPEHAYAVYQTMVTGG 1097
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 151/621 (24%), Positives = 248/621 (39%), Gaps = 73/621 (11%)
Query: 40 SGGLLKTTTTVSEMNRKGLDP----ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSV 95
SG + T +M KG+ P SL L ++ A ++ + + G +P
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSL--AKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
TYN+++ Y + +DEA+ +L M EP+V+ N++I+ L R+ EA ++
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN 212
M L P VTYNTL+ + KN + AI L++ M Q+ P T+ +L LC +
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGK-IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 213 -VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
V A K+ +M+ G P + TYN +I +V++AM F M + + PD V
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLC 681
Query: 272 TLITFFCKYGELEKAFEMRAEMVER-GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
TL+ K +E A+++ + P + LI + + + A ++
Sbjct: 682 TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA 741
Query: 331 GG--------LSP---REYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
G L P + N+ GA L +F+K ++ P
Sbjct: 742 NGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQ-----------------PK 784
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
L TYN LI G +E A + + PD +YN ++ + K G++ + FEL
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 440 EMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILH-DEMEHHGSLR 498
EM S + ++ + +N VI+ G V AL L+ D M
Sbjct: 845 EM---------------STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 889
Query: 499 ASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELA 558
+ Y L DG K R AK+ M C NC+ L
Sbjct: 890 TACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP-----------NCAIYNI-----LI 933
Query: 559 KGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFA 618
GFG G + A ++ +++ +PD Y+ L+ C VD+ + + E+ G
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Query: 619 SHMFSVLALIKALFHVGRHNE 639
+ +I L R E
Sbjct: 994 PDVVCYNLIINGLGKSHRLEE 1014
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 7/299 (2%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVID 135
A V ++ ++G +P VATYN LL AY + ++DE + + M+ E N ++ N VI
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 136 GLCAKRRIKEAEELLQE-MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
GL + +A +L + M+ + +P + TY LI +SK+ L A L++ M
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY-EAKQLFEGMLDYGC 922
Query: 195 PVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
Y LI+ D A +F M+ G P L TY+ L+ C RV + +
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM-VERGILPNADTYSKLIDCL 312
F+ + + GL PD V N +I K LE+A + EM RGI P+ TY+ LI L
Sbjct: 983 YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
+ EA ++ E+ GL P + + L+ Y L G+ A+ + M+ GF P+
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A ++ M++ G P+ A YN+L++ + + D A + + M V P++ +++ ++D
Sbjct: 910 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
LC R+ E +E+ GL PD V YN +I + K+ L A+ L+++MK R
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE-EALVLFNEMKTSR-- 1026
Query: 196 VPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
G P L TYN LI V++A I+
Sbjct: 1027 -------------------------------GITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
+ GL P+ N LI + G+ E A+ + MV G PN TY +L
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 178/361 (49%), Gaps = 21/361 (5%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGM---------AVEPNVVSFNTVIDGLCAKRRI 143
P V T +L++ C+ +RVDEA+ + M ++ + + FNT+IDGLC R+
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 144 KEAEELLQEMN-SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYT 202
KEAEELL M + AP++VTYN LI + L A + +MK+ I T
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLET-AKEVVSRMKEDEIKPNVVTVN 445
Query: 203 SLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR 261
+++ +C ++ ++ A F +M G + ++VTY LIHA C V+ AM + M +
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
G +PDA I LI+ C+ A + ++ E G + Y+ LI C + +
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKV 565
Query: 322 FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
+++ +M G P Y L+ + +F + ++M G P ++
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP--------TVT 617
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMS-LSPDDVSYNIVISGFCKLGELGKAFELMVE 440
TY A+I C +G ++EAL + + M S ++P+ V YNI+I+ F KLG G+A L E
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 441 M 441
M
Sbjct: 678 M 678
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 209/502 (41%), Gaps = 58/502 (11%)
Query: 161 DSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-----VDK 215
+S N ++ + +N LV A + D+M Q+ P T+ I L + +K
Sbjct: 184 NSQVRNVVVDVLLRN-GLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEK 242
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
+ + + G P+ V I + C R A I + +A N L++
Sbjct: 243 IIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLS 302
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG----- 330
+ ++ + ++ +M E I P+ T LI+ LC RR+ EA ++F +M G
Sbjct: 303 CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDD 362
Query: 331 GGLSPREYAYFN-LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYG 389
G + + +FN L+ C VG +A +E++ + L + +P+ VTYN LI G
Sbjct: 363 GNVIKADSIHFNTLIDGLCKVGRLKEA----EELLVRMKLEE---RCAPNAVTYNCLIDG 415
Query: 390 NCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
C G++E A ++ M E + P+ V+ N ++ G C+ L A ++M E G++G
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM-EKEGVKG 474
Query: 450 VDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDG 509
+ V Y ++I+A C+ V KA+ +++M G + +Y L G
Sbjct: 475 --------------NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 510 FDKKARTRGAKESLLRMFYDLCT---SLPTFTYDTLIE-NCSNNEFKSVVELAKGFGMRG 565
+ R A +R+ L SL Y+ LI C N + V E+ G
Sbjct: 521 LCQVRRDHDA----IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEG 576
Query: 566 LKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVL 625
KPD YN LI + ++ + M +M G + +
Sbjct: 577 ----------------KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 626 ALIKALFHVGRHNEVRRVIQNV 647
A+I A VG +E ++ +++
Sbjct: 621 AVIDAYCSVGELDEALKLFKDM 642
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA----VEPNVVSFNT 132
++ +++ +M G P+V TY ++ AYC +DEA+ + + M V PN V +N
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+I+ +A L +EM K + P+ TYN L +++ T + L D+M +Q
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGET-LLKLMDEMVEQ 716
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 200/414 (48%), Gaps = 36/414 (8%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGM---------AVEPNVVSFNTVIDGLCAKRRI 143
P V T +L++ C+ +RVDEA+ + M ++ + + FNT+IDGLC R+
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 144 KEAEELLQEMN-SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYT 202
KEAEELL M + P++VTYN LI + L A + +MK+ I T
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLET-AKEVVSRMKEDEIKPNVVTVN 445
Query: 203 SLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR 261
+++ +C ++ ++ A F +M G + ++VTY LIHA C V+ AM + M +
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
G +PDA I LI+ C+ A + ++ E G + Y+ LI C + +
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 322 FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
+++ +M G P Y L+ + +F + ++M G P ++
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP--------TVT 617
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMS-LSPDDVSYNIVISGFCKLGELGKAFELMVE 440
TY A+I C +G ++EAL + + M S ++P+ V YNI+I+ F KLG G+A L E
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 441 MDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
M + +R ++ +++L K L+++ +GE L L DEM H
Sbjct: 678 M-KMKMVRP-NVETYNALFKCLNEK-----------TQGET--LLKLMDEMVEH 716
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 208/502 (41%), Gaps = 58/502 (11%)
Query: 161 DSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV-----DK 215
+S N ++ + +N LV A + D+M Q+ P T+ I L + +K
Sbjct: 184 NSQVRNVVVDVLLRN-GLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEK 242
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
+ + + G P+ V I + C R A I + +A N L++
Sbjct: 243 IIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS 302
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG----- 330
+ ++ + ++ +M E I P+ T LI+ LC RR+ EA ++F +M G
Sbjct: 303 CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDD 362
Query: 331 GGLSPREYAYFN-LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYG 389
G + + +FN L+ C VG +A +E++ + L + P+ VTYN LI G
Sbjct: 363 GNVIKADSIHFNTLIDGLCKVGRLKEA----EELLVRMKLEERCV---PNAVTYNCLIDG 415
Query: 390 NCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
C G++E A ++ M E + P+ V+ N ++ G C+ L A ++M E G++G
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM-EKEGVKG 474
Query: 450 VDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDG 509
+ V Y ++I+A C+ V KA+ +++M G + +Y L G
Sbjct: 475 --------------NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 510 FDKKARTRGAKESLLRMFYDLCT---SLPTFTYDTLIE-NCSNNEFKSVVELAKGFGMRG 565
+ R A +R+ L SL Y+ LI C N + V E+ G
Sbjct: 521 LCQVRRDHDA----IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Query: 566 LKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVL 625
KPD YN LI + ++ + M +M G + +
Sbjct: 577 ----------------KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 626 ALIKALFHVGRHNEVRRVIQNV 647
A+I A VG +E ++ +++
Sbjct: 621 AVIDAYCSVGELDEALKLFKDM 642
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 6/250 (2%)
Query: 85 EMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKR 141
+M G +V TY L+HA C V++AM M P+ + +I GLC R
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVR 525
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
R +A +++++ G + D + YN LI N L D K+ + P TY
Sbjct: 526 RDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS-ITY 584
Query: 202 TSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP- 259
+LI + + + ++ +M G +P++ TY +I AYC + +A+ +F+ M
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
+ P+ VI N LI F K G +A ++ EM + + PN +TY+ L CL + +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 320 EAFDLFREML 329
L EM+
Sbjct: 705 TLLKLMDEMV 714
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA----VEPNVVSFNTVIDG 136
+++ +M G P+V TY ++ AYC +DEA+ + + M V PN V +N +I+
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTN 177
+A L +EM K + P+ TYN L +++ T
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 177/361 (49%), Gaps = 21/361 (5%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGM---------AVEPNVVSFNTVIDGLCAKRRI 143
P V T +L++ C+ +RVDEA+ + M ++ + + FNT+IDGLC R+
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 144 KEAEELLQEMN-SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYT 202
KEAEELL M + P++VTYN LI + L A + +MK+ I T
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLET-AKEVVSRMKEDEIKPNVVTVN 445
Query: 203 SLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR 261
+++ +C ++ ++ A F +M G + ++VTY LIHA C V+ AM + M +
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
G +PDA I LI+ C+ A + ++ E G + Y+ LI C + +
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 322 FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
+++ +M G P Y L+ + +F + ++M G P ++
Sbjct: 566 YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDP--------TVT 617
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMS-LSPDDVSYNIVISGFCKLGELGKAFELMVE 440
TY A+I C +G ++EAL + + M S ++P+ V YNI+I+ F KLG G+A L E
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEE 677
Query: 441 M 441
M
Sbjct: 678 M 678
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 208/502 (41%), Gaps = 58/502 (11%)
Query: 161 DSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV-----DK 215
+S N ++ + +N LV A + D+M Q+ P T+ I L + +K
Sbjct: 184 NSQVRNVVVDVLLRN-GLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEK 242
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
+ + + G P+ V I + C R A I + +A N L++
Sbjct: 243 IIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS 302
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG----- 330
+ ++ + ++ +M E I P+ T LI+ LC RR+ EA ++F +M G
Sbjct: 303 CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDD 362
Query: 331 GGLSPREYAYFN-LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYG 389
G + + +FN L+ C VG +A +E++ + L + P+ VTYN LI G
Sbjct: 363 GNVIKADSIHFNTLIDGLCKVGRLKEA----EELLVRMKLEERCV---PNAVTYNCLIDG 415
Query: 390 NCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
C G++E A ++ M E + P+ V+ N ++ G C+ L A ++M E G++G
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM-EKEGVKG 474
Query: 450 VDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDG 509
+ V Y ++I+A C+ V KA+ +++M G + +Y L G
Sbjct: 475 --------------NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 510 FDKKARTRGAKESLLRMFYDLCT---SLPTFTYDTLIE-NCSNNEFKSVVELAKGFGMRG 565
+ R A +R+ L SL Y+ LI C N + V E+ G
Sbjct: 521 LCQVRRDHDA----IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Query: 566 LKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVL 625
KPD YN LI + ++ + M +M G + +
Sbjct: 577 ----------------KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 626 ALIKALFHVGRHNEVRRVIQNV 647
A+I A VG +E ++ +++
Sbjct: 621 AVIDAYCSVGELDEALKLFKDM 642
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA----VEPNVVSFNT 132
++ +++ +M G P+V TY ++ AYC +DEA+ + + M V PN V +N
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+I+ +A L +EM K + P+ TYN L +++ T + L D+M +Q
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGET-LLKLMDEMVEQ 716
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 147/630 (23%), Positives = 261/630 (41%), Gaps = 82/630 (13%)
Query: 61 ARESLIHLLCCDQLQNDNAYKVLS--EMVNSGFLPSVATYNVLLHAYCRD---KRVDEAM 115
+R+SL +L DN V+S E ++ PS + +++ Y R R E
Sbjct: 279 SRKSLQRIL---DTNGDNWQAVISAFEKISK---PSRTEFGLMVKFYGRRGDMHRARETF 332
Query: 116 GILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN 175
+R + P + ++I R + EA +++M +G+ VTY+ ++ SK
Sbjct: 333 ERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKA 392
Query: 176 TNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVT 234
+ A +D+ K+ + + Y +I+ C T N+++A + EM G + +
Sbjct: 393 GHAEA-ADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI 451
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
Y+ ++ Y + + +F+ + + G TP V LI + K G++ KA E+ M
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
E G+ N TYS +I+ + + AF +F +M+ G+ P Y N++ A+C +G
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 355 KAFH-------LRDEMIHKGFLP---------DFVTEFS-----------PSLVTYNALI 387
+A LR + F+P D P++ T+N LI
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
G ++E+A+ IL M +S ++ +Y ++ G+ +G+ GKAFE +
Sbjct: 632 NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN---- 687
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
G+D+ +F+ Y +++ A C G + AL + EM R S +Y +L
Sbjct: 688 EGLDVDIFT-----------YEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILI 736
Query: 508 DGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCS-------------------- 547
DG+ ++ A + L++ TY + I CS
Sbjct: 737 DGWARRGDVWEAAD-LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGV 795
Query: 548 NNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAY- 606
K+ L KG+ L +A S + KPD AVY+ L+ R ++ +AY
Sbjct: 796 KPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYI 855
Query: 607 -----NMYMEMVHYGFASHMFSVLALIKAL 631
+ EMV G M + + K L
Sbjct: 856 YSGVMTICKEMVEAGLIVDMGTAVHWSKCL 885
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 176/426 (41%), Gaps = 41/426 (9%)
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++ +A + F M A G P+ Y LIHAY + +A+ R M + G+ V +
Sbjct: 324 DMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYS 383
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
++ F K G E A E NA Y K+I C + A L REM
Sbjct: 384 VIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEE 443
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
G+ Y ++ Y +V + K + + GF +P++VTY LI
Sbjct: 444 GIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF--------TPTVVTYGCLINLYT 495
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
+G++ +AL + R M E + + +Y+++I+GF KL + AF + +M + G
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG------ 549
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
MK D + YN++I+A+C G + +A+ EM+ + ++ + G+
Sbjct: 550 -------MK--PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 512 KKARTRGAKESLLRMFYDLCTSLPTF-TYDTLIENCSNNEFKSVVELAKGFGMRGLKNEA 570
K R + E M C +PT T++ LI G + +A
Sbjct: 601 KSGDMRRSLEVFDMM--RRCGCVPTVHTFNGLI---------------NGLVEKRQMEKA 643
Query: 571 ASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKA 630
+L+ + + Y ++ + + KA+ + + + G +F+ AL+KA
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 631 LFHVGR 636
GR
Sbjct: 704 CCKSGR 709
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 130/287 (45%), Gaps = 15/287 (5%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
SG + ++ M R G P + L+ ++ Q + A ++L EM +G + T
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 98 YNVLLHAYCR---DKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
Y ++ Y + E L+ ++ ++ ++ ++ C R++ A + +EM+
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY--N 212
++ + +S YN LI ++ + V A L QMK++ + TYTS I C+ +
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGD-VWEAADLIQQMKKEGVKPDIHTYTSFISA-CSKAGD 779
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+++A + EM A G +P++ TY LI + + A+ + M G+ PD + +
Sbjct: 780 MNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHC 839
Query: 273 LITFFCKYGELEKAF------EMRAEMVERGILPNADTYSKLIDCLC 313
L+T + +A+ + EMVE G++ + T CLC
Sbjct: 840 LLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLC 886
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 178/345 (51%), Gaps = 16/345 (4%)
Query: 99 NVLLHAYCRDKRVDEAMGI----LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
N LL+ + RV++AM + LR + + +FN +I GLC + ++A ELL M+
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP-WTTYTSLIHLLCTY-N 212
G PD VTYNTLI K +N + +A ++ +K + P TYTS+I C
Sbjct: 234 GFGCEPDIVTYNTLIQGFCK-SNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+ +A + +M+ G P+ VT+N L+ Y + A I M G PD V +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
LI +C+ G++ + F + EM RG+ PNA TYS LI+ LC + RL +A +L ++
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
+ P+ + Y ++ +C G+ ++A + +EM K PD +T+ LI G+C+
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD--------KITFTILIIGHCM 464
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
GR+ EA+ I M + SPD ++ + ++S K G +A+ L
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 198/432 (45%), Gaps = 38/432 (8%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELL 150
S TYN+L + C+ D A + M V PN ++ K ++ A LL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 151 -QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
Q +G + N+L+ + K + V A+ L+D+ + + T+ LI LC
Sbjct: 162 LQSFEVEGCC---MVVNSLLNTLVK-LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 210 TY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL-TPDA 267
+KA ++ M G EP +VTYN LI +C + + A +F+ + + +PD
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
V ++I+ +CK G++ +A + +M+ GI P T++ L+D + A ++ +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
M+ G P + +L+ YC VG+ S+ F L +EM +G P+ TY+ LI
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN--------AFTYSILI 389
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
C R+ +A +L +A + P YN VI GFCK G++ +A ++ EM++
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK--- 446
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGS-----LRASVL 502
K D++ + +I +C +G + +A+ + +M G +S+L
Sbjct: 447 ------------KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 503 YIMLFDGFDKKA 514
+L G K+A
Sbjct: 495 SCLLKAGMAKEA 506
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 195/449 (43%), Gaps = 42/449 (9%)
Query: 198 WTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
WT Y L LC + D A ++F M + G P+ L+ ++ + ++ A +
Sbjct: 104 WT-YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL- 161
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
+ + ++ N+L+ K +E A ++ E + + T++ LI LC
Sbjct: 162 -LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 317 RLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEF 376
+ +A +L M G G P Y L+ +C E +KA + + + G +
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSG------SVC 273
Query: 377 SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
SP +VTY ++I G C G++ EA +L M + + P +V++N+++ G+ K GE+ A E
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGS 496
+ +M G D V + S+I+ YC G+VS+ L +EM G
Sbjct: 334 IRGKMISFGC---------------FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 497 LRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVE 556
+ Y +L + + R A+E L ++ P F Y+ +I+
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP-FMYNPVID------------ 425
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
GF G NEA ++ + + KPD + LI+ HC + + +A +++ +MV G
Sbjct: 426 ---GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 617 FASHMFSVLALIKALFHVGRHNEVRRVIQ 645
+ +V +L+ L G E + Q
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 132/367 (35%), Gaps = 60/367 (16%)
Query: 361 DEMIHKGF----LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
D H GF F S TYN L C G + A + M +SP++
Sbjct: 80 DNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNR 139
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMK---------------- 460
++S F + G+L A L+++ E G V ++ ++L+K
Sbjct: 140 LLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLR 199
Query: 461 --GLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRG 518
+D +N +I C G+ KAL L M G V Y L GF K
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 519 AKESLLRMFYDL----CTSLPTFTYDTLIEN-CSNNEFKSVVE----------------- 556
A E MF D+ S TY ++I C + +
Sbjct: 260 ASE----MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTF 315
Query: 557 --LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
L G+ G A + ++ + PD + LI +CR V + + ++ EM
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 615 YGFASHMFSVLALIKALFHVGRHNEVRRVI----------QNVLRSCNINGFELHKALSE 664
G + F+ LI AL + R + R ++ Q + + I+GF ++E
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 665 TGVIVRE 671
VIV E
Sbjct: 436 ANVIVEE 442
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 178/345 (51%), Gaps = 16/345 (4%)
Query: 99 NVLLHAYCRDKRVDEAMGI----LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
N LL+ + RV++AM + LR + + +FN +I GLC + ++A ELL M+
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP-WTTYTSLIHLLCTY-N 212
G PD VTYNTLI K +N + +A ++ +K + P TYTS+I C
Sbjct: 234 GFGCEPDIVTYNTLIQGFCK-SNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+ +A + +M+ G P+ VT+N L+ Y + A I M G PD V +
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
LI +C+ G++ + F + EM RG+ PNA TYS LI+ LC + RL +A +L ++
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
+ P+ + Y ++ +C G+ ++A + +EM K PD +T+ LI G+C+
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD--------KITFTILIIGHCM 464
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
GR+ EA+ I M + SPD ++ + ++S K G +A+ L
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 198/432 (45%), Gaps = 38/432 (8%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELL 150
S TYN+L + C+ D A + M V PN ++ K ++ A LL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 151 -QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
Q +G + N+L+ + K + V A+ L+D+ + + T+ LI LC
Sbjct: 162 LQSFEVEGCC---MVVNSLLNTLVK-LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 210 TY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL-TPDA 267
+KA ++ M G EP +VTYN LI +C + + A +F+ + + +PD
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
V ++I+ +CK G++ +A + +M+ GI P T++ L+D + A ++ +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
M+ G P + +L+ YC VG+ S+ F L +EM +G P+ TY+ LI
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN--------AFTYSILI 389
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
C R+ +A +L +A + P YN VI GFCK G++ +A ++ EM++
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK--- 446
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGS-----LRASVL 502
K D++ + +I +C +G + +A+ + +M G +S+L
Sbjct: 447 ------------KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 503 YIMLFDGFDKKA 514
+L G K+A
Sbjct: 495 SCLLKAGMAKEA 506
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 195/449 (43%), Gaps = 42/449 (9%)
Query: 198 WTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
WT Y L LC + D A ++F M + G P+ L+ ++ + ++ A +
Sbjct: 104 WT-YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL- 161
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
+ + ++ N+L+ K +E A ++ E + + T++ LI LC
Sbjct: 162 -LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 317 RLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEF 376
+ +A +L M G G P Y L+ +C E +KA + + + G +
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSG------SVC 273
Query: 377 SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
SP +VTY ++I G C G++ EA +L M + + P +V++N+++ G+ K GE+ A E
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGS 496
+ +M G D V + S+I+ YC G+VS+ L +EM G
Sbjct: 334 IRGKMISFGC---------------FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 497 LRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVE 556
+ Y +L + + R A+E L ++ P F Y+ +I+
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP-FMYNPVID------------ 425
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
GF G NEA ++ + + KPD + LI+ HC + + +A +++ +MV G
Sbjct: 426 ---GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 617 FASHMFSVLALIKALFHVGRHNEVRRVIQ 645
+ +V +L+ L G E + Q
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 132/367 (35%), Gaps = 60/367 (16%)
Query: 361 DEMIHKGF----LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
D H GF F S TYN L C G + A + M +SP++
Sbjct: 80 DNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNR 139
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMK---------------- 460
++S F + G+L A L+++ E G V ++ ++L+K
Sbjct: 140 LLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLR 199
Query: 461 --GLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRG 518
+D +N +I C G+ KAL L M G V Y L GF K
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 519 AKESLLRMFYDL----CTSLPTFTYDTLIEN-CSNNEFKSVVE----------------- 556
A E MF D+ S TY ++I C + +
Sbjct: 260 ASE----MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTF 315
Query: 557 --LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
L G+ G A + ++ + PD + LI +CR V + + ++ EM
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 615 YGFASHMFSVLALIKALFHVGRHNEVRRVI----------QNVLRSCNINGFELHKALSE 664
G + F+ LI AL + R + R ++ Q + + I+GF ++E
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 665 TGVIVRE 671
VIV E
Sbjct: 436 ANVIVEE 442
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 188/407 (46%), Gaps = 15/407 (3%)
Query: 45 KTTTTVSEMNRKGLDP-ARESLIHLL-CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLL 102
K + EM G+ P I++L C + + A K+ M G LP++ TY+ ++
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 103 HAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLA 159
YC+ V +A G+ + + V PNVV F T++DG C R + A L M G+
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 160 PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYK 218
P+ YN LI K+ N+ + A+ L +M+ + TYT LI+ LC + V +A +
Sbjct: 337 PNLYVYNCLIHGHCKSGNM-LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
+F +M PS TYN LIH YC ++ A+ + M G+ P+ + +TLI +C
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
+++ A + EM +GI+P+ TY+ LID + + EA L+ +ML G+ P ++
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEE 398
+ LV + G S A E + + V + LI G C G +
Sbjct: 516 TFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH--------VGFTCLIEGLCQNGYILR 567
Query: 399 ALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
A M ++PD SY ++ G + + L +M + G
Sbjct: 568 ASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTG 614
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 198/423 (46%), Gaps = 25/423 (5%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
S+ +++L+ + +EA+ + R M P+ + ++++GL +RR Q M
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN- 212
S+GL PD Y L K L + L D+M I YT I LC N
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQ-GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+++A K+F M G P+L TY+ +I YC V+ A G+++ + L P+ V+ T
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
L+ FCK EL A + MV+ G+ PN Y+ LI C + EA L EM
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
LSP + Y L+ C+ + ++A L +M ++ PS TYN+LI+G C
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF--------PSSATYNSLIHGYCK 421
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
+E+AL + M + P+ ++++ +I G+C + ++ A L EM I+G+
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT----IKGI-- 475
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
+ D V Y ++I+A+ E + +AL L+ +M G + L DGF K
Sbjct: 476 ---------VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Query: 513 KAR 515
+ R
Sbjct: 527 EGR 529
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 196/448 (43%), Gaps = 38/448 (8%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYC--------RDKRVDEAMGILRGMAVEPNVV 128
D+ + M++ G +P V Y VL C ++K +DE + + ++PNV
Sbjct: 181 DSVWVDYQLMISRGLVPDVHIYFVLFQC-CFKQGLYSKKEKLLDE----MTSLGIKPNVY 235
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
+ I LC +++EAE++ + M G+ P+ TY+ +I K N V +A LY +
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN-VRQAYGLYKE 294
Query: 189 MKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
+ + + +L+ C + A +F M+ G +P+L YN LIH +C
Sbjct: 295 ILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
+ +A+G+ M L+PD LI C ++ +A + +M I P++ TY+
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
LI C + + +A DL EM G+ P + L+ YC V + A L EM KG
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
+PD +VTY ALI + ++EAL + M E + P+D ++ ++ GF K
Sbjct: 475 IVPD--------VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALIL 487
G L A + E ++ + + V + +I C G + +A
Sbjct: 527 EGRLSVAIDFYQENNQQ---------------RSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 488 HDEMEHHGSLRASVLYIMLFDGFDKKAR 515
+M G Y+ + G ++ R
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKR 599
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 153/321 (47%), Gaps = 6/321 (1%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVI 134
A + MV G P++ YN L+H +C+ + EA+G+L M + P+V ++ +I
Sbjct: 322 TARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILI 381
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+GLC + ++ EA L Q+M ++ + P S TYN+LI K N+ +A+ L +M +
Sbjct: 382 NGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME-QALDLCSEMTASGV 440
Query: 195 PVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
T+++LI C ++ A ++ EM G P +VTY LI A+ +++A+
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
++ M + G+ P+ L+ F K G L A + E ++ N ++ LI+ LC
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD-F 372
+ A F +M G++P +Y +++ + + L+ +MI G LP+
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
Query: 373 VTEFSPSLVTYNALIYGNCLL 393
V + N + C L
Sbjct: 621 VNQLLARFYQANGYVKSACFL 641
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 189/459 (41%), Gaps = 71/459 (15%)
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
++A+ + R M +PD+ C +++ + + + M+ RG++P+ Y L
Sbjct: 149 EEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVL 205
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
C Q S+ L EM G+ P Y Y + C + +A + + M G
Sbjct: 206 FQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGV 265
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
LP+ L TY+A+I G C G V +A G+ + + L P+ V + ++ GFCK
Sbjct: 266 LPN--------LYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA 317
Query: 429 GELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG---------------------LSDEV- 466
EL A L V M + G +L V++ L+ G LS +V
Sbjct: 318 RELVTARSLFVHMVKFG--VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 467 NYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
Y +IN C E +V++A L +M++ +S Y L G+ KE +
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGY--------CKEYNMEQ 427
Query: 527 FYDLCTSLPT-------FTYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVL 578
DLC+ + T+ TLI+ C+ + K+ + L ++G+
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI------------ 475
Query: 579 QWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHN 638
PD Y LI H + N+ +A +Y +M+ G + + L+ + GR +
Sbjct: 476 ----VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLS 531
Query: 639 EVRRVIQ--NVLRSC-NINGFE-LHKALSETGVIVREDK 673
Q N RSC N GF L + L + G I+R +
Sbjct: 532 VAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 141/566 (24%), Positives = 249/566 (43%), Gaps = 73/566 (12%)
Query: 73 QLQNDN----AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEP 125
QL N N + K L+ +V+ G+ P +++N ++ C+ +V A I+ M EP
Sbjct: 30 QLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEP 89
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMN-SKGL--APDSVTYNTLITAMSKNTNLVIRA 182
+V+S+N++IDG C I+ A +L+ + S G PD V++N+L SK ++
Sbjct: 90 DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMK--MLDE 147
Query: 183 IALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHA 241
+ +Y + + TY++ I C + + A K F M P++VT+ LI
Sbjct: 148 VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
YC ++ A+ +++ M ++ + V LI FCK GE+++A EM + MVE + PN
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
+ Y+ +ID + A +ML G+ AY ++ C G+ +A + +
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Query: 362 EMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIV 421
+M +PD +V + ++ GR++ A+ + + E PD V+ + +
Sbjct: 328 DMEKSDLVPD--------MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Query: 422 ISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEV 481
I G K G+L +A V+ + K +++V Y +I+A C EG+
Sbjct: 380 IDGIAKNGQLHEAI------------------VYFCIEK--ANDVMYTVLIDALCKEGDF 419
Query: 482 SKALILHDEMEHHGSLRASVLYIMLFDGFDK--------KARTRGAKESLLRMFYDLCTS 533
+ L ++ G + +Y G K K +TR +E LL
Sbjct: 420 IEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL--------- 470
Query: 534 LPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLI 593
L Y TLI G +GL EA V + +L PD AV++ LI
Sbjct: 471 LDLLAYTTLI---------------YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515
Query: 594 VEHCRRRNVDKAYNMYMEMVHYGFAS 619
+ + N+ A ++ ++M G +
Sbjct: 516 RAYEKEGNMAAASDLLLDMQRRGLVT 541
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 177/409 (43%), Gaps = 46/409 (11%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
P+V TY+ + +C+ + A+ M A+ PNVV+F +IDG C ++ A L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LL 208
+EM ++ + VTY LI K + RA +Y +M + R+ YT++I
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQ-RAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 209 CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
+ D A K +M+ G + Y +I C ++++A I M L PD V
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILP---------------------------- 300
I T++ + K G ++ A M +++ERG P
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399
Query: 301 --NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
N Y+ LID LC + E LF ++ GL P ++ Y + + C G AF
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
L+ M+ +G L D L+ Y LIYG G + EA + M +SPD +
Sbjct: 460 LKTRMVQEGLLLD--------LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVN 467
+++I + K G + A +L+++M G + V A S K +EVN
Sbjct: 512 DLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADCS---KQCGNEVN 557
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 225/502 (44%), Gaps = 48/502 (9%)
Query: 56 KGLDPARESL--IHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDE 113
+G P R S + C Q A ++ M G P V +YN L+ +CR+ +
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 114 AMGILR------GMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNT 167
A +L G +P++VSFN++ +G + + E + M K +P+ VTY+T
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYST 168
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIAS 226
I K+ L + A+ + MK+ + T+T LI C +++ A ++ EM
Sbjct: 169 WIDTFCKSGELQL-ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
++VTY LI +C + +Q A ++ M + + P++++ T+I F + G+ + A
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA 287
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ A+M+ +G+ + Y +I LC +L EA ++ +M L P + ++ A
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVT------------EFSPSL----------VTYN 384
Y G A ++ ++I +GF PD V + ++ V Y
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYT 407
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA 444
LI C G E + ++E L PD Y I+G CK G L AF+L M +
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 445 GGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYI 504
G + +DL +++L+ GL+ ++G + +A + DEM + G S ++
Sbjct: 468 GLL--LDLLAYTTLIYGLA-------------SKGLMVEARQVFDEMLNSGISPDSAVFD 512
Query: 505 MLFDGFDKKARTRGAKESLLRM 526
+L ++K+ A + LL M
Sbjct: 513 LLIRAYEKEGNMAAASDLLLDM 534
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 140/586 (23%), Positives = 237/586 (40%), Gaps = 102/586 (17%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL----------RGMAVEPNVV 128
A + LS + S LP T N +H + ++ GIL RG P+
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIH-----QLINSNCGILSLKFLAYLVSRGYT--PHRS 57
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
SFN+V+ +C ++K AE+++ M G PD ++YN+LI +N + IR+ +L
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD--IRSASL--- 112
Query: 189 MKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIAS-GF--EPSLVTYNELIHAYCCR 245
V + AS GF +P +V++N L + + +
Sbjct: 113 ------------------------------VLESLRASHGFICKPDIVSFNSLFNGFS-K 141
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
++ D + ++ G+ + +P+ V +T I FCK GEL+ A + M + PN T+
Sbjct: 142 MKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTF 201
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+ LID C L A L++EM +S Y L+ +C GE +A + M+
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
P+ + Y +I G G + A+ L M + D +Y ++ISG
Sbjct: 262 D--------RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313
Query: 426 CKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKAL 485
C G+L +A E++ +M+++ + D+ +F+++M NAY G + A+
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLVP--DMVIFTTMM-------------NAYFKSGRMKAAV 358
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN 545
++ ++ G V + DG K + A + Y Y LI+
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA------IVYFCIEKANDVMYTVLIDA 412
Query: 546 -CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDK 604
C +F V L GL PD +Y I C++ N+
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLV----------------PDKFMYTSWIAGLCKQGNLVD 456
Query: 605 AYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
A+ + MV G + + LI L G E R+V +L S
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS 502
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 10/303 (3%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C + + A ++ S MV P+ Y ++ + + D AM L M + ++
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDI 303
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
++ +I GLC ++KEA E++++M L PD V + T++ A K+ + A+ +Y
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK-AAVNMYH 362
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPS-LVTYNELIHAYCCRD 246
++ ++ +++I + K ++ ++ E + V Y LI A C
Sbjct: 363 KLIERGFEPDVVALSTMID-----GIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEG 417
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ +F + + GL PD + + I CK G L AF+++ MV+ G+L + Y+
Sbjct: 418 DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYT 477
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
LI L + + EA +F EML G+SP + L+ AY G + A L +M +
Sbjct: 478 TLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
Query: 367 GFL 369
G +
Sbjct: 538 GLV 540
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 204/411 (49%), Gaps = 35/411 (8%)
Query: 57 GLDPARESLIHLLC-----------------CDQLQNDNAYKVLSEMVNSGFLPSVATYN 99
GL+ ARE + H+L C D +++L M + G P + +
Sbjct: 251 GLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFT 310
Query: 100 VLLHAYCRDKRVDEAMGIL---RGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
V + C+ + EA +L + + + VS ++VIDG C ++ + EE ++ ++S
Sbjct: 311 VFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC---KVGKPEEAIKLIHSF 367
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDK 215
L P+ Y++ ++ + +T ++RA ++ ++ + + YT++I C DK
Sbjct: 368 RLRPNIFVYSSFLSNIC-STGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCR-DRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
A++ F ++ SG PSL T LI A C R + DA +FR M GL D V N L+
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGA-CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+ K +L K FE+ EM GI P+ TY+ LI + + + EA ++ E++ G
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
P A+ +++G + G+F +AF I ++ D P +VT +AL++G C
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAF------ILWFYMADL--RMKPDVVTCSALLHGYCKAQ 597
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
R+E+A+ + + + L PD V YN +I G+C +G++ KA EL+ M + G
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 192/423 (45%), Gaps = 31/423 (7%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A + + M++ G + A ++ + YC D D+ +L GM + P++V+F ID
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
LC +KEA +L ++ G++ DSV+ +++I K AI L + R+
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK-VGKPEEAIKL---IHSFRLR 370
Query: 196 VPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
Y+S + +C T ++ +A +F E+ G P V Y +I YC R A
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F + G P LI ++G + A + M G+ + TY+ L+
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
+L++ F+L EM G+SP Y L+ + + G +A + E+I +GF+P
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP---- 546
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
S + + +I G G +EA + MA++ + PD V+ + ++ G+CK + KA
Sbjct: 547 ----STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
L ++ +AG +K D V YN++I+ YC+ G++ KA L M
Sbjct: 603 IVLFNKLLDAG-------------LK--PDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Query: 495 GSL 497
G L
Sbjct: 648 GML 650
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 147/284 (51%), Gaps = 21/284 (7%)
Query: 39 TSGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVA 96
++G +L+ +T E+ GL P ++ C+ + D A++ ++ SG PS+
Sbjct: 385 STGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLT 444
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGMAVEP---NVVSFNTVIDGLCAKRRIKEAEELLQEM 153
T +L+ A R + +A + R M E +VV++N ++ G ++ + EL+ EM
Sbjct: 445 TSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM 504
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ------QRIPVPWT-TYTSLIH 206
S G++PD TYN LI +M V+R D+ + +R VP T +T +I
Sbjct: 505 RSAGISPDVATYNILIHSM------VVRGYI--DEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 207 LLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
+ +A+ ++ M +P +VT + L+H YC R++ A+ +F + D GL P
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
D V+ NTLI +C G++EKA E+ MV+RG+LPN T+ L+
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 38/296 (12%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM--AVEPNVVSFNTVIDG 136
A + E+ G LP Y ++ YC R D+A + + P ++ +T++ G
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 137 LCAK-RRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
C++ I +AE + + M ++GL D VTYN L+ K
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK--------------------- 490
Query: 196 VPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
T+ ++K +++ EM ++G P + TYN LIH+ R + +A I
Sbjct: 491 --------------THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
+ RG P + +I F K G+ ++AF + M + + P+ T S L+ C
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
+R+ +A LF ++L GL P Y L+ YC VG+ KA L M+ +G LP+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 175/461 (37%), Gaps = 77/461 (16%)
Query: 204 LIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL 263
L +L + ++ A + M++ G + + I YC + GM G+
Sbjct: 243 LKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGI 302
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI------------------------- 298
PD V I CK G L++A + ++ GI
Sbjct: 303 RPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK 362
Query: 299 -------LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVG 351
PN YS + +C + A +F+E+ GL P Y ++ YC +G
Sbjct: 363 LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLG 422
Query: 352 EFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSL 411
KAF ++ G PSL T LI G + +A + R M L
Sbjct: 423 RTDKAFQYFGALLKSG--------NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
Query: 412 SPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEV-NYNS 470
D V+YN ++ G+ K +L K FEL+ EM A G+S +V YN
Sbjct: 475 KLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA----------------GISPDVATYNI 518
Query: 471 VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDL 530
+I++ G + +A + E+ G + +++ + + GF K+ +E+ + FY
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG---DFQEAFILWFY-- 573
Query: 531 CTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYN 590
+ + CS L G+ +A + N +L KPD +YN
Sbjct: 574 ---MADLRMKPDVVTCS--------ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYN 622
Query: 591 FLIVEHCRRRNVDKAYNMYMEMVHYGF----ASHMFSVLAL 627
LI +C +++KA + MV G ++H VL L
Sbjct: 623 TLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 170/425 (40%), Gaps = 57/425 (13%)
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
M RG +A + + I +C G +K +E+ M GI P+ ++ ID LC
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 318 LSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
L EA + ++ G+S + +++ +C VG+ +A L IH
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL----IHS-------FRLR 370
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P++ Y++ + C G + A I + + E+ L PD V Y +I G+C LG KAF+
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 438 MVEMDEAGGIRGVDLA------------------VFSSL-MKGLS-DEVNYNSVINAYCA 477
+ ++G + + VF ++ +GL D V YN++++ Y
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 478 EGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF 537
+++K L DEM G Y +L + A E + + F
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR------RGF 544
Query: 538 TYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHC 597
TL + ++ GF RG EA + + KPD + L+ +C
Sbjct: 545 VPSTL----------AFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 598 RRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFE 657
+ + ++KA ++ +++ G + LI VG ++ ++C + G
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG----------DIEKACELIGLM 644
Query: 658 LHKAL 662
+ + +
Sbjct: 645 VQRGM 649
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 141/379 (37%), Gaps = 57/379 (15%)
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
A ++ ++ + GI P+ L+ + L A + ML G +
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
YC G F K + L M H G PD +V + I C G ++EA +L
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKEATSVLFK 331
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE 465
+ +S D VS + VI GFCK+G+ +A +L+ I
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNI------------------ 373
Query: 466 VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLR 525
Y+S ++ C+ G++ +A + E+ G L V Y + DG+ RT A +
Sbjct: 374 FVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA----FQ 429
Query: 526 MFYDLCTS--LPTFTYDT-LIENCSNNEFKSVVE----------------------LAKG 560
F L S P+ T T LI CS F S+ + L G
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACS--RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 561 FGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASH 620
+G N+ +++ + PD A YN LI R +D+A + E++ GF
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 621 MFSVLALIKALFHVGRHNE 639
+ +I G E
Sbjct: 548 TLAFTDVIGGFSKRGDFQE 566
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQND--NAYKVLSEMVNSGFLPSV 95
V G + + +SE+ R+G P+ + ++ + D A+ + M + P V
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
T + LLH YC+ +R+++A+ + + ++P+VV +NT+I G C+ I++A EL+
Sbjct: 584 VTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGL 643
Query: 153 MNSKGLAPDSVTYNTLITAM 172
M +G+ P+ T++ L+ +
Sbjct: 644 MVQRGMLPNESTHHALVLGL 663
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 204/411 (49%), Gaps = 35/411 (8%)
Query: 57 GLDPARESLIHLLC-----------------CDQLQNDNAYKVLSEMVNSGFLPSVATYN 99
GL+ ARE + H+L C D +++L M + G P + +
Sbjct: 251 GLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFT 310
Query: 100 VLLHAYCRDKRVDEAMGIL---RGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
V + C+ + EA +L + + + VS ++VIDG C ++ + EE ++ ++S
Sbjct: 311 VFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC---KVGKPEEAIKLIHSF 367
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDK 215
L P+ Y++ ++ + +T ++RA ++ ++ + + YT++I C DK
Sbjct: 368 RLRPNIFVYSSFLSNIC-STGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCR-DRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
A++ F ++ SG PSL T LI A C R + DA +FR M GL D V N L+
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGA-CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+ K +L K FE+ EM GI P+ TY+ LI + + + EA ++ E++ G
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
P A+ +++G + G+F +AF I ++ D P +VT +AL++G C
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAF------ILWFYMADL--RMKPDVVTCSALLHGYCKAQ 597
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
R+E+A+ + + + L PD V YN +I G+C +G++ KA EL+ M + G
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 192/423 (45%), Gaps = 31/423 (7%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A + + M++ G + A ++ + YC D D+ +L GM + P++V+F ID
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
LC +KEA +L ++ G++ DSV+ +++I K AI L + R+
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK-VGKPEEAIKL---IHSFRLR 370
Query: 196 VPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
Y+S + +C T ++ +A +F E+ G P V Y +I YC R A
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F + G P LI ++G + A + M G+ + TY+ L+
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
+L++ F+L EM G+SP Y L+ + + G +A + E+I +GF+P
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP---- 546
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
S + + +I G G +EA + MA++ + PD V+ + ++ G+CK + KA
Sbjct: 547 ----STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
L ++ +AG +K D V YN++I+ YC+ G++ KA L M
Sbjct: 603 IVLFNKLLDAG-------------LK--PDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Query: 495 GSL 497
G L
Sbjct: 648 GML 650
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 147/284 (51%), Gaps = 21/284 (7%)
Query: 39 TSGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVA 96
++G +L+ +T E+ GL P ++ C+ + D A++ ++ SG PS+
Sbjct: 385 STGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLT 444
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGMAVEP---NVVSFNTVIDGLCAKRRIKEAEELLQEM 153
T +L+ A R + +A + R M E +VV++N ++ G ++ + EL+ EM
Sbjct: 445 TSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM 504
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ------QRIPVPWT-TYTSLIH 206
S G++PD TYN LI +M V+R D+ + +R VP T +T +I
Sbjct: 505 RSAGISPDVATYNILIHSM------VVRGYI--DEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 207 LLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
+ +A+ ++ M +P +VT + L+H YC R++ A+ +F + D GL P
Sbjct: 557 GFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKP 616
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
D V+ NTLI +C G++EKA E+ MV+RG+LPN T+ L+
Sbjct: 617 DVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 38/296 (12%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM--AVEPNVVSFNTVIDG 136
A + E+ G LP Y ++ YC R D+A + + P ++ +T++ G
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 137 LCAK-RRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
C++ I +AE + + M ++GL D VTYN L+ K
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK--------------------- 490
Query: 196 VPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
T+ ++K +++ EM ++G P + TYN LIH+ R + +A I
Sbjct: 491 --------------THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
+ RG P + +I F K G+ ++AF + M + + P+ T S L+ C
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
+R+ +A LF ++L GL P Y L+ YC VG+ KA L M+ +G LP+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 175/461 (37%), Gaps = 77/461 (16%)
Query: 204 LIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL 263
L +L + ++ A + M++ G + + I YC + GM G+
Sbjct: 243 LKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGI 302
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI------------------------- 298
PD V I CK G L++A + ++ GI
Sbjct: 303 RPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK 362
Query: 299 -------LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVG 351
PN YS + +C + A +F+E+ GL P Y ++ YC +G
Sbjct: 363 LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLG 422
Query: 352 EFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSL 411
KAF ++ G PSL T LI G + +A + R M L
Sbjct: 423 RTDKAFQYFGALLKSG--------NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
Query: 412 SPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEV-NYNS 470
D V+YN ++ G+ K +L K FEL+ EM A G+S +V YN
Sbjct: 475 KLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA----------------GISPDVATYNI 518
Query: 471 VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDL 530
+I++ G + +A + E+ G + +++ + + GF K+ +E+ + FY
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG---DFQEAFILWFY-- 573
Query: 531 CTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYN 590
+ + CS L G+ +A + N +L KPD +YN
Sbjct: 574 ---MADLRMKPDVVTCS--------ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYN 622
Query: 591 FLIVEHCRRRNVDKAYNMYMEMVHYGF----ASHMFSVLAL 627
LI +C +++KA + MV G ++H VL L
Sbjct: 623 TLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 170/425 (40%), Gaps = 57/425 (13%)
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
M RG +A + + I +C G +K +E+ M GI P+ ++ ID LC
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 318 LSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
L EA + ++ G+S + +++ +C VG+ +A L IH
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL----IHS-------FRLR 370
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P++ Y++ + C G + A I + + E+ L PD V Y +I G+C LG KAF+
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 438 MVEMDEAGGIRGVDLA------------------VFSSL-MKGLS-DEVNYNSVINAYCA 477
+ ++G + + VF ++ +GL D V YN++++ Y
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 478 EGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF 537
+++K L DEM G Y +L + A E + + F
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR------RGF 544
Query: 538 TYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHC 597
TL + ++ GF RG EA + + KPD + L+ +C
Sbjct: 545 VPSTL----------AFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 598 RRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFE 657
+ + ++KA ++ +++ G + LI VG ++ ++C + G
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG----------DIEKACELIGLM 644
Query: 658 LHKAL 662
+ + +
Sbjct: 645 VQRGM 649
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 141/379 (37%), Gaps = 57/379 (15%)
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
A ++ ++ + GI P+ L+ + L A + ML G +
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
YC G F K + L M H G PD +V + I C G ++EA +L
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKEATSVLFK 331
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE 465
+ +S D VS + VI GFCK+G+ +A +L+ I
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNI------------------ 373
Query: 466 VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLR 525
Y+S ++ C+ G++ +A + E+ G L V Y + DG+ RT A +
Sbjct: 374 FVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA----FQ 429
Query: 526 MFYDLCTS--LPTFTYDT-LIENCSNNEFKSVVE----------------------LAKG 560
F L S P+ T T LI CS F S+ + L G
Sbjct: 430 YFGALLKSGNPPSLTTSTILIGACS--RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 561 FGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASH 620
+G N+ +++ + PD A YN LI R +D+A + E++ GF
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 621 MFSVLALIKALFHVGRHNE 639
+ +I G E
Sbjct: 548 TLAFTDVIGGFSKRGDFQE 566
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQND--NAYKVLSEMVNSGFLPSV 95
V G + + +SE+ R+G P+ + ++ + D A+ + M + P V
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
T + LLH YC+ +R+++A+ + + ++P+VV +NT+I G C+ I++A EL+
Sbjct: 584 VTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGL 643
Query: 153 MNSKGLAPDSVTYNTLITAM 172
M +G+ P+ T++ L+ +
Sbjct: 644 MVQRGMLPNESTHHALVLGL 663
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 192/443 (43%), Gaps = 87/443 (19%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNV 127
C Q + D A + +M+ SG +P + T+N LL+ C+ +++A G+ +R M PN
Sbjct: 132 CLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNC 191
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMS-------------- 173
VS+NT+I GLC+ + +A L MN G+ P+ VT N ++ A+
Sbjct: 192 VSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLE 251
Query: 174 -------------------------KNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL 208
KN N V++A+ ++ +M Q+ +P Y +I L
Sbjct: 252 EILDSSQANAPLDIVICTILMDSCFKNGN-VVQALEVWKEMSQKNVPADSVVYNVIIRGL 310
Query: 209 CTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
C+ N+ AY +M+ G P + TYN LI A C + +A + M + G+ PD
Sbjct: 311 CSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQ 370
Query: 268 V-----------------------------------ICNTLITFFCKYGELEKAFEMRAE 292
+ + N +I + +YG+ A +
Sbjct: 371 ISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNL 430
Query: 293 MVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE 352
M+ G+ PN T + LI RL +A+ + EM + P Y L+GA C +G
Sbjct: 431 MLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGH 490
Query: 353 FSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLS 412
AF L DEM+ +G PD ++TY L+ G C GR+++A +L + ++
Sbjct: 491 LRLAFQLYDEMLRRGCQPD--------IITYTELVRGLCWKGRLKKAESLLSRIQATGIT 542
Query: 413 PDDVSYNIVISGFCKLGELGKAF 435
D V + I+ + +L G+A+
Sbjct: 543 IDHVPFLILAKKYTRLQRPGEAY 565
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 205/440 (46%), Gaps = 32/440 (7%)
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQ 151
++ ++ ++ C ++D A+ + + M V P +++ N +++GLC I++A+ L++
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY 211
EM G +P+ V+YNTLI + + N V +A+ L++ M + I T ++H LC
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLC-SVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQK 239
Query: 212 NV--DKAYKVFTEMIAS--GFEPSLVTYNELIHAYCCRD-RVQDAMGIFRGMPDRGLTPD 266
V + K+ E++ S P + ++ C ++ V A+ +++ M + + D
Sbjct: 240 GVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPAD 299
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
+V+ N +I C G + A+ +MV+RG+ P+ TY+ LI LC + + EA DL
Sbjct: 300 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHG 359
Query: 327 EMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNAL 386
M GG++P + +Y ++ C+ G+ ++A M + P ++ +N +
Sbjct: 360 TMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM--------LKSSLLPEVLLWNVV 411
Query: 387 IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGG 446
I G G AL +L M + P+ + N +I G+ K G L A+ + EM
Sbjct: 412 IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRST-- 469
Query: 447 IRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIML 506
K D YN ++ A C G + A L+DEM G + Y L
Sbjct: 470 -------------KIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTEL 516
Query: 507 FDGFDKKARTRGAKESLLRM 526
G K R + A+ L R+
Sbjct: 517 VRGLCWKGRLKKAESLLSRI 536
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 193/454 (42%), Gaps = 44/454 (9%)
Query: 199 TTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRG 257
+ ++S++ LC +D A + +MI SG P L+T+N L++ C ++ A G+ R
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
M + G +P+ V NTLI C ++KA + M + GI PN T + ++ LC +
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 318 L-SEAFDLFREMLGGGL--SPREYAYFNLVGAYCLV-GEFSKAFHLRDEMIHKGFLPDFV 373
+ + L E+L +P + ++ C G +A + EM K D
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS- 300
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
V YN +I G C G + A G + M + ++PD +YN +IS CK G+ +
Sbjct: 301 -------VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
A +L M + GG+ D+++Y +I C G+V++A M
Sbjct: 354 ACDLHGTM-QNGGVA--------------PDQISYKVIIQGLCIHGDVNRANEFLLSMLK 398
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKS 553
L +L+ ++ DG+ + T A S+L + +T + LI
Sbjct: 399 SSLLPEVLLWNVVIDGYGRYGDTSSAL-SVLNLMLSYGVKPNVYTNNALIH--------- 448
Query: 554 VVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMV 613
G+ G +A V N + PD YN L+ C ++ A+ +Y EM+
Sbjct: 449 ------GYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEML 502
Query: 614 HYGFASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
G + + L++ L GR + ++ +
Sbjct: 503 RRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 143/359 (39%), Gaps = 53/359 (14%)
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
+ FEMR +ER + S LC ++ S+ D ++ P A FN++
Sbjct: 44 RDFEMRLSCIER-----PPSISGNHSHLCTEKWFSDQKDYDQKE-----DPE--AIFNVL 91
Query: 345 GAYCLVGEFSKAFHLRDEMIH-KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGIL 403
Y L + LR+ + K F ++ L +++++ CL G+++ AL +
Sbjct: 92 D-YILKSSLDRLASLRESVCQTKSF------DYDDCLSIHSSIMRDLCLQGKLDAALWLR 144
Query: 404 RGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS 463
+ M + P +++N +++G CK G + KA L+ EM E G
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNC------------- 191
Query: 464 DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESL 523
V+YN++I C+ V KAL L + M +G V ++ +K + L
Sbjct: 192 --VSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKL 249
Query: 524 LRMFYDLCTS---LPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQW 580
L D + L L+++C N G +A V + Q
Sbjct: 250 LEEILDSSQANAPLDIVICTILMDSCFKN---------------GNVVQALEVWKEMSQK 294
Query: 581 NYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNE 639
N D VYN +I C N+ AY +MV G +F+ LI AL G+ +E
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 203/423 (47%), Gaps = 38/423 (8%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVIDGLC 138
+LS+M GF+P + +NV L CR+ +V A+ M EP+VVS+ +I+GL
Sbjct: 101 LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM--SKNTNLVIRAIALYDQMKQQRIPV 196
++ +A E+ M G++PD+ L+ + ++ +L +A +++K R+ +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVA--EEIKSARVKL 218
Query: 197 PWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
Y +LI C ++KA + + M G EP LVTYN L++ Y + ++ A G+
Sbjct: 219 STVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFE-MRAEMVERGILPNADTYSKLIDCLCP 314
M G+ DA N L+ C+ +K + M EM RG + +YS LI+ C
Sbjct: 279 AEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCR 337
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
+A+ LF EM G+ Y +L+ A+ G S A L D+M G
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG------- 390
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
SP + Y ++ C G V++A G+ M E ++PD +SYN +ISG C+ G + +A
Sbjct: 391 -LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEA 449
Query: 435 FELMVEM-------DE-------AGGIRGVDLA----VFSSLM-KGLS-DEVNYNSVINA 474
+L +M DE G IRG L+ V+ +M KG + D +++I A
Sbjct: 450 IKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Query: 475 YCA 477
C+
Sbjct: 510 SCS 512
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 171/342 (50%), Gaps = 14/342 (4%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLP-SVA 96
+G + + M R G+ P ++ L+ C + D AY++++E + S + S
Sbjct: 162 AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTV 221
Query: 97 TYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
YN L+ +C+ R+++A + + + EP++V++N +++ +K AE ++ EM
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW---TTYTSLIHLLC- 209
G+ D+ +YN L+ K V Y+ M ++ P + +Y++LI C
Sbjct: 282 VRSGIQLDAYSYNQLL----KRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCR 337
Query: 210 TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
N KAY++F EM G ++VTY LI A+ A + M + GL+PD +
Sbjct: 338 ASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIF 397
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
T++ CK G ++KA+ + +M+E I P+A +Y+ LI LC R++EA LF +M
Sbjct: 398 YTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
G P E + ++G + S A+ + D+M+ KGF D
Sbjct: 458 GKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 201/490 (41%), Gaps = 48/490 (9%)
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
+++ + I L I A ++ EM S YN I + + + + A A+Y
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFEL-AEAIYW 68
Query: 188 QMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
MK + TY+ I LC D + ++M GF P + +N + C +
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+V A+ F M RG PD V LI + G++ A E+ M+ G+ P+ +
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN-LVGAYCLVGEFSKAFHLRDEMIH 365
L+ LC R++ A+++ E + +N L+ +C G KA L+ M
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 366 KGFLPDFVTEFSPSLVTYNALI---YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
G PD LVTYN L+ Y N +L R E G++ M + D SYN ++
Sbjct: 249 IGCEPD--------LVTYNVLLNYYYDNNMLKRAE---GVMAEMVRSGIQLDAYSYNQLL 297
Query: 423 SGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVS 482
C++ K + MV+ E +G D V+Y+++I +C
Sbjct: 298 KRHCRVSHPDKCYNFMVKEMEP---------------RGFCDVVSYSTLIETFCRASNTR 342
Query: 483 KALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTL 542
KA L +EM G + V Y L F ++ + AK+ LL +L S Y T+
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK-LLDQMTELGLSPDRIFYTTI 401
Query: 543 IENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNV 602
+++ + G ++A V N +++ PD YN LI CR V
Sbjct: 402 LDHLCKS---------------GNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRV 446
Query: 603 DKAYNMYMEM 612
+A ++ +M
Sbjct: 447 TEAIKLFEDM 456
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 220/517 (42%), Gaps = 76/517 (14%)
Query: 77 DNAYKVLSEMVNS-----------------------------------GFLPSVATYNVL 101
DNA +V EM +S GF TY+
Sbjct: 26 DNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRF 85
Query: 102 LHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL 158
+ C+ K+ D +L M P++ +FN +D LC + ++ A + M +G
Sbjct: 86 ISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGR 145
Query: 159 APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAY 217
PD V+Y LI + + V A+ +++ M + + +L+ LC VD AY
Sbjct: 146 EPDVVSYTILINGLFR-AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 218 KVFTEMIASG-FEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
++ E I S + S V YN LI +C R++ A + M G PD V N L+ +
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY 264
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFD-LFREMLGGGLSP 335
+ L++A + AEMV GI +A +Y++L+ C + ++ + +EM P
Sbjct: 265 YYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM-----EP 319
Query: 336 REY----AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
R + +Y L+ +C KA+ L +EM KG + + +VTY +LI
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMN--------VVTYTSLIKAFL 371
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
G A +L M E+ LSPD + Y ++ CK G + KA+ + +M E
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH------- 424
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
+ D ++YNS+I+ C G V++A+ L ++M+ + + + G
Sbjct: 425 --------EITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLI 476
Query: 512 KKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE-NCS 547
+ + A + +M D +L DTLI+ +CS
Sbjct: 477 RGKKLSAAYKVWDQMM-DKGFTLDRDVSDTLIKASCS 512
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 145/406 (35%), Gaps = 109/406 (26%)
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+D A +VF EM S + YN I R + A I+ M G + +
Sbjct: 25 IDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSR 84
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
I+ CK + + + ++M G +P+ ++ +D LC + ++ A F
Sbjct: 85 FISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTF------- 137
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
+C M+ +G PD +V+Y LI G
Sbjct: 138 --------------FC--------------MVQRGREPD--------VVSYTILINGLFR 161
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
G+V +A+ I M +SPD+ + ++ G C ++ A+E++ E ++ ++
Sbjct: 162 AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVK---- 217
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
LS V YN++I+ +C G + KA L M G V Y
Sbjct: 218 ---------LS-TVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY--------- 258
Query: 513 KARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAAS 572
LL +YD NN K A
Sbjct: 259 --------NVLLNYYYD------------------NNMLK----------------RAEG 276
Query: 573 VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYN-MYMEMVHYGF 617
V+ +++ + D YN L+ HCR + DK YN M EM GF
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF 322
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 199/439 (45%), Gaps = 52/439 (11%)
Query: 51 SEMNRKGLDPARES---LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
+M G P R + LIH +C + D A +++ +M G P+V TY +L+ +
Sbjct: 204 QQMRSDGCKPDRFTYNILIHGVCKKGVV-DEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 108 DKRVDEAMGILRGMAVE---PNVVSFNTVIDGL------CAKRRI--------------- 143
RVDEA+ L M V PN + T + G+ C +
Sbjct: 263 AGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVG 322
Query: 144 --------------KEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
KE + L+++ +G PDS T+N ++ + K +LV ++D
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLV-ETCRIFDGF 381
Query: 190 KQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRV 248
+ + + Y L+ LL + + +M G S+ +YN +I C R+
Sbjct: 382 VSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRI 441
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
++A M DRG++P+ V NT ++ + G+++K + +++ G P+ T+S +
Sbjct: 442 ENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLI 501
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
I+CLC + + +AFD F+EML G+ P E Y L+ + C G+ ++ L +M G
Sbjct: 502 INCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGL 561
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
SP L YNA I C + +V++A +L+ M + L PD+ +Y+ +I +
Sbjct: 562 --------SPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSES 613
Query: 429 GELGKAFELMVEMDEAGGI 447
G +A E+ ++ G +
Sbjct: 614 GRESEAREMFSSIERHGCV 632
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 209/508 (41%), Gaps = 64/508 (12%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCR---DKRVDEAMGILRGMAVEPNVVSFNTVID 135
+ ++L E+ +SG+ S VL+ ++ R K ++ + + ++P+ +N VID
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
L + A Q+M S G PD TYN LI + K +V AI L QM+Q+
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK-GVVDEAIRLVKQMEQEGNR 247
Query: 196 VPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHA------------- 241
TYT LI L VD+A K M P+ T +H
Sbjct: 248 PNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEV 307
Query: 242 --------------------YCCRDR--VQDAMGIFRGMPDRGLTPDAVICNTLITFFCK 279
YC + ++ R + +RG PD+ N ++ K
Sbjct: 308 LVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLK 367
Query: 280 YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYA 339
+L + + V RG+ P + Y L+ L +R SE ++M GL Y+
Sbjct: 368 GHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYS 427
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEA 399
Y ++ C A EM +G SP+LVT+N + G + G V++
Sbjct: 428 YNAVIDCLCKARRIENAAMFLTEMQDRG--------ISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLM 459
G+L + PD ++++++I+ C+ E+ AF+ EM E G++
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEW----GIE-------- 527
Query: 460 KGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGA 519
+E+ YN +I + C+ G+ +++ L +M+ +G Y F K + + A
Sbjct: 528 ---PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKA 584
Query: 520 KESLLRMFYDLCTSLPTFTYDTLIENCS 547
+E LL+ + FTY TLI+ S
Sbjct: 585 EE-LLKTMLRIGLKPDNFTYSTLIKALS 611
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 38/298 (12%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGL 137
++ V+ G P Y VL+ A +R E L+ M V+ +V S+N VID L
Sbjct: 376 RIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCL 435
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
C RRI+ A L EM +G++P+ VT+NT ++ S +R
Sbjct: 436 CKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYS------VRG--------------- 474
Query: 198 WTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRG 257
+V K + V +++ GF+P ++T++ +I+ C ++DA F+
Sbjct: 475 --------------DVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKE 520
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
M + G+ P+ + N LI C G+ +++ ++ A+M E G+ P+ Y+ I C R+
Sbjct: 521 MLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRK 580
Query: 318 LSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE 375
+ +A +L + ML GL P + Y L+ A G S+A + + G +PD T+
Sbjct: 581 VKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTK 638
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 195/493 (39%), Gaps = 63/493 (12%)
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
VF ++ G +PS YN +I A + + A F+ M G PD N LI C
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
K G +++A + +M + G PN TY+ LID R+ EA M L+P E
Sbjct: 227 KKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGR--V 396
V KAF + GF+ + + V Y+A++Y CL
Sbjct: 287 TIRTFVHGIFRCLPPCKAFE-----VLVGFME---KDSNLQRVGYDAVLY--CLSNNSMA 336
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFCK---LGELGKAFELMVEMDEAGGIRGVDLA 453
+E LR + E PD ++N +S K L E + F+ V G G L
Sbjct: 337 KETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGY-LV 395
Query: 454 VFSSLMKG------------------LSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
+ +L+ LS +YN+VI+ C + A + EM+ G
Sbjct: 396 LVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRG 455
Query: 496 SLRASVLYIMLFDGFDKKA---RTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFK 552
V + G+ + + G E LL + P +LI NC
Sbjct: 456 ISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK-----PDVITFSLIINC------ 504
Query: 553 SVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
L + ++ +A +L+W +P+ YN LI C + D++ ++ +M
Sbjct: 505 ----LCRAKEIK----DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM 556
Query: 613 VHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLR----SCNINGFELHKALSETGVI 668
G + +++ A I++ + + + +++ +LR N L KALSE+G
Sbjct: 557 KENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESG-- 614
Query: 669 VREDKVKDVLLNV 681
RE + +++ ++
Sbjct: 615 -RESEAREMFSSI 626
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 164/324 (50%), Gaps = 16/324 (4%)
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
P+VV+F T+++GLC + R+ +A L+ M +G P Y T+I + K + A+
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD-TESALN 62
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCT--YNVDKAYKVFTEMIASGFEPSLVTYNELIHAY 242
L +M++ I Y ++I LC +++ A +FTEM G P ++TY+ +I ++
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHI-HAQNLFTEMHDKGIFPDVITYSGMIDSF 121
Query: 243 CCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNA 302
C R DA + R M +R + PD V + LI K G++ +A E+ +M+ RGI P
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
TY+ +ID C Q RL++A + M SP + L+ YC + E
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 363 MIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
M +G + + VTY LI+G C +G ++ A +L M ++P+ +++ ++
Sbjct: 242 MHRRGIVAN--------TVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 423 SGFCKLGELGKAFELMVEMDEAGG 446
+ C EL KAF ++ ++ ++ G
Sbjct: 294 ASLCSKKELRKAFAILEDLQKSEG 317
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 157/306 (51%), Gaps = 14/306 (4%)
Query: 64 SLIHLLCCDQ--LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM 121
+L++ LCC+ LQ A ++ MV G P Y +++ C+ + A+ +L M
Sbjct: 15 TLMNGLCCEGRVLQ---ALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKM 67
Query: 122 A---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL 178
++ +VV +N +ID LC A+ L EM+ KG+ PD +TY+ +I + ++
Sbjct: 68 EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW 127
Query: 179 VIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNE 237
L D +++Q P T+++LI+ L V +A +++ +M+ G P+ +TYN
Sbjct: 128 TDAEQLLRDMIERQINP-DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 238 LIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG 297
+I +C +DR+ DA + M + +PD V +TLI +CK ++ E+ EM RG
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 298 ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAF 357
I+ N TY+ LI C L A DL M+ G++P + +++ + C E KAF
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Query: 358 HLRDEM 363
+ +++
Sbjct: 307 AILEDL 312
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 133/290 (45%), Gaps = 48/290 (16%)
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
M+ +G P +VT+ L++ CC RV A+ + M + G P I N L CK G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGL----CKMGD 56
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
E A + ++M E I + Y+ +ID LC A +LF EM G+ P Y
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS------------------------- 377
++ ++C G ++ A L +MI + PD VT FS
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVT-FSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 378 ---PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
P+ +TYN++I G C R+ +A +L MA S SPD V+++ +I+G+CK +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKA 484
E+ EM RG+ +++ V Y ++I+ +C G++ A
Sbjct: 236 MEIFCEMHR----RGI-----------VANTVTYTTLIHGFCQVGDLDAA 270
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 45/340 (13%)
Query: 293 MVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE 352
MVE G P+ T++ L++ LC + R+ +A L M+ G P Y ++ C +G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 353 FSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLS 412
A +L +M T +V YNA+I C G A + M + +
Sbjct: 57 TESALNLLSKMEE--------THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIF 108
Query: 413 PDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVI 472
PD ++Y+ +I FC+ G A +L+ +M E R ++ D V ++++I
Sbjct: 109 PDVITYSGMIDSFCRSGRWTDAEQLLRDMIE----RQIN-----------PDVVTFSALI 153
Query: 473 NAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCT 532
NA EG+VS+A ++ +M G ++ Y + DGF K+ R AK L M C
Sbjct: 154 NALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC- 212
Query: 533 SLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNF 591
S T+ TLI C + +E+ RG+ V NTV Y
Sbjct: 213 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI------VANTV----------TYTT 256
Query: 592 LIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKAL 631
LI C+ ++D A ++ M+ G A + + +++ +L
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 124/311 (39%), Gaps = 49/311 (15%)
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
M+ G P + L+ C G +A L D M+ +G P Y +I
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP------------YGTII 48
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
G C +G E AL +L M E + V YN +I CK G A L EM + G
Sbjct: 49 NGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG-- 106
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
+F D + Y+ +I+++C G + A L +M V + L
Sbjct: 107 ------IFP-------DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALI 153
Query: 508 DGFDKKARTRGAKESLLRMFYDLCTS--LPT-FTYDTLIENCSNNEFKSVVELAKGFGMR 564
+ K+ + A+E ++ D+ PT TY+++I+ GF +
Sbjct: 154 NALVKEGKVSEAEE----IYGDMLRRGIFPTTITYNSMID---------------GFCKQ 194
Query: 565 GLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSV 624
N+A +L+++ + PD ++ LI +C+ + VD ++ EM G ++ +
Sbjct: 195 DRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 254
Query: 625 LALIKALFHVG 635
LI VG
Sbjct: 255 TTLIHGFCQVG 265
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 139/554 (25%), Positives = 231/554 (41%), Gaps = 85/554 (15%)
Query: 90 GFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEA 146
G PSV YN +L + R+ + R M EPNV ++N ++ LC ++ A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 147 EELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
++LL EM++KG PD+V+Y T+I++M + + L + ++
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCE--------VGLVKEGRE--------------- 237
Query: 207 LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPD 266
+A FEP + YN LI+ C + A + R M ++G++P+
Sbjct: 238 -----------------LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPN 280
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
+ +TLI C G++E AF +M++RG PN T S L+ + +A DL+
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 327 EMLGG-GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNA 385
+M+ G GL P AY LV +C G KA + M G SP++ TY +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG--------CSPNIRTYGS 392
Query: 386 LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
LI G G ++ A+ I M P+ V Y ++ C+ + +A L+ M +
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 446 GIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME-HHGSLRASVLYI 504
V F++ +KGL C G + A + +ME H V Y
Sbjct: 453 CAPSV--PTFNAFIKGL-------------CDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 505 MLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMR 564
L DG K R A L R + + TY+TL+ N
Sbjct: 498 ELLDGLAKANRIEEAY-GLTREIFMRGVEWSSSTYNTLLHGSCN---------------A 541
Query: 565 GLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSV 624
GL A ++ ++ PD N +I+ +C++ ++A M +++V G V
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM-LDLVSCGRRKWRPDV 600
Query: 625 LALIKALFHVGRHN 638
++ ++ + R N
Sbjct: 601 ISYTNVIWGLCRSN 614
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 19/397 (4%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C + A++++ EMV G P+V +Y+ L++ C +++ A L M PN+
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEM-NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALY 186
+ ++++ G + +A +L +M GL P+ V YNTL+ + N+V +A++++
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIV-KAVSVF 375
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
M++ TY SLI+ ++D A ++ +M+ SG P++V Y ++ A C
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG-ILPNADT 304
+ ++A + M P N I C G L+ A ++ +M ++ PN T
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVT 495
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
Y++L+D L R+ EA+ L RE+ G+ Y L+ C G A L +M+
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555
Query: 365 HKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILR--GMAEMSLSPDDVSYNIVI 422
G SP +T N +I C G+ E A +L PD +SY VI
Sbjct: 556 VDGK--------SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVI 607
Query: 423 SGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLM 459
G C+ L+ M AG + + A +S L+
Sbjct: 608 WGLCRSNCREDGVILLERMISAGIVPSI--ATWSVLI 642
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 187/383 (48%), Gaps = 17/383 (4%)
Query: 52 EMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHA-YCR 107
EM KG+ P + +LI++LC + Q + A+ L++M+ G P++ T + L+ + R
Sbjct: 271 EMVEKGISPNVISYSTLINVLC-NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329
Query: 108 DKRVDE---AMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
D ++RG ++PNVV++NT++ G C+ I +A + M G +P+ T
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMI 224
Y +LI +K +L A+ ++++M YT+++ LC ++ K + E++
Sbjct: 390 YGSLINGFAKRGSL-DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 225 AS-GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVIC-NTLITFFCKYGE 282
+ PS+ T+N I C R+ A +FR M + P ++ N L+ K
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
+E+A+ + E+ RG+ ++ TY+ L+ C A L +M+ G SP E
Sbjct: 509 IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNM 568
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
++ AYC G+ +A + D ++ G ++ P +++Y +I+G C E+ + +
Sbjct: 569 IILAYCKQGKAERAAQMLD-LVSCG-----RRKWRPDVISYTNVIWGLCRSNCREDGVIL 622
Query: 403 LRGMAEMSLSPDDVSYNIVISGF 425
L M + P +++++I+ F
Sbjct: 623 LERMISAGIVPSIATWSVLINCF 645
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 179/429 (41%), Gaps = 61/429 (14%)
Query: 228 FEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAF 287
F+ + +T+ +I +V + + M +G + ++I+ + + G E+A
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 288 EMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAY 347
EM + E G P+ Y+ ++D L + R+ + ++R+M G P + Y L+ A
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 348 CLVGEFSKAFHLRDEMIHKGFLPDFVT----------------------EFSPSLVTYNA 385
C + A L EM +KG PD V+ F P + YNA
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNA 251
Query: 386 LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
LI G C + A ++R M E +SP+ +SY+ +I+ C G++ AF + +M + G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 446 G---------------IRGVD---LAVFSSLMKGLSDEVN---YNSVINAYCAEGEVSKA 484
+RG L +++ +++G + N YN+++ +C+ G + KA
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 485 LILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE 544
+ + ME G Y L +GF K+ GA +M C Y ++E
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP-NVVVYTNMVE 430
Query: 545 N-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVD 603
C +++FK EA S++ + + N P +N I C +D
Sbjct: 431 ALCRHSKFK----------------EAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 474
Query: 604 KAYNMYMEM 612
A ++ +M
Sbjct: 475 WAEKVFRQM 483
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 11/305 (3%)
Query: 18 MTRGFTAAAAAGSLESEPKKVTS-GGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQL 74
M RGF + + + S G ++K + S M G P + L+ +
Sbjct: 342 MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFN 131
D A + ++M+ SG P+V Y ++ A CR + EA ++ M+ E P+V +FN
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 461
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKG-LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
I GLC R+ AE++ ++M + P+ VTYN L+ ++K N + A L ++
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAK-ANRIEEAYGLTREIF 520
Query: 191 QQRIPVPWTTYTSLIHLLCTYNVDK-AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
+ + +TY +L+H C + A ++ +M+ G P +T N +I AYC + + +
Sbjct: 521 MRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAE 580
Query: 250 DAMGIFR--GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
A + R PD + +I C+ E + M+ GI+P+ T+S
Sbjct: 581 RAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSV 640
Query: 308 LIDCL 312
LI+C
Sbjct: 641 LINCF 645
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 149/573 (26%), Positives = 239/573 (41%), Gaps = 89/573 (15%)
Query: 69 LCCDQLQNDNA----YKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE 124
L D L DN ++ L E+ + G + VL+ AY + GMA E
Sbjct: 97 LVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAK-----------MGMA-E 144
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
V SF R+KE + PD TYN ++ M + + A A
Sbjct: 145 KAVESFG----------RMKEFD----------CRPDVFTYNVILRVMMREEVFFMLAFA 184
Query: 185 LYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
+Y++M + T+ L+ L A K+F +M G P+ VTY LI C
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
R DA +F M G PD+V N L+ FCK G + +AFE+ + G +
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
YS LID L RR ++AF+L+ ML + P Y L+ G+ A L M
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS 423
KG SP YNA+I C G +EE + M+E PD ++ I+I
Sbjct: 365 PSKG--------ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416
Query: 424 GFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSK 483
C+ G + +A E+ E++++G V +N++I+ C GE+ +
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSV---------------ATFNALIDGLCKSGELKE 461
Query: 484 ALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLC------TSLPTF 537
A +L +ME R + L++ L ++ T S+L+ + DL +S
Sbjct: 462 ARLLLHKMEVG---RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIV 518
Query: 538 TYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQW---------------- 580
+Y+ LI C + ++L ++GL ++ + NT++
Sbjct: 519 SYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY-NTLINGLHRVGREEEAFKLFYA 577
Query: 581 --NYKPDGAVYNFLIVEHCRRRNVDKAYNMYME 611
+++ AVY L+ CR+R V A+N++M+
Sbjct: 578 KDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMK 610
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 212/512 (41%), Gaps = 38/512 (7%)
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
F VID L + L+E+ S G++ DS + LI+A +K + +A+ + +M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAK-MGMAEKAVESFGRM 153
Query: 190 KQQRIPVPWTTYTSLIHLLCTYNV--DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
K+ TY ++ ++ V A+ V+ EM+ P+L T+ L+ + R
Sbjct: 154 KEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
DA +F M RG++P+ V LI+ C+ G + A ++ EM G P++ ++
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
L+D C R+ EAF+L R G Y +L+ +++AF L M+ K
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN 333
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
PD ++ Y LI G G++E+AL +L M +SPD YN VI C
Sbjct: 334 IKPD--------IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCG 385
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALIL 487
G L + L +EM E + D + +I + C G V +A +
Sbjct: 386 RGLLEEGRSLQLEMSET---------------ESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 488 HDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCS 547
E+E G + + L DG K + A+ L +M SL + +
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL-----RLSHSG 485
Query: 548 NNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYN 607
N F ++VE G +A L PD YN LI CR ++D A
Sbjct: 486 NRSFDTMVE-------SGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538
Query: 608 MYMEMVHYGFASHMFSVLALIKALFHVGRHNE 639
+ + G + + LI L VGR E
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 197/492 (40%), Gaps = 105/492 (21%)
Query: 52 EMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
+M +G+ P R + L+ C + D+A K+ EM SG P +N LL +C+
Sbjct: 223 DMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLG 282
Query: 110 RVDEAMGILR---------GMA-----------------------------VEPNVVSFN 131
R+ EA +LR G+ ++P+++ +
Sbjct: 283 RMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYT 342
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
+I GL +I++A +LL M SKG++PD+ YN +I A+ L+ +L +M +
Sbjct: 343 ILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALC-GRGLLEEGRSLQLEMSE 401
Query: 192 QRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
T+T LI +C V +A ++FTE+ SG PS+ T+N LI C +++
Sbjct: 402 TESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKE 461
Query: 251 AMGIFRGM---------------------------------------PDRGLTPDAVICN 271
A + M D G +PD V N
Sbjct: 462 ARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYN 521
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF------ 325
LI FC+ G+++ A ++ + +G+ P++ TY+ LI+ L R EAF LF
Sbjct: 522 VLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDF 581
Query: 326 -------REMLGGGLSPRE-YAYFNLVGAY-----CL----VGEFSKAFHLRD-EMIHKG 367
R ++ R+ FNL Y CL E + F + E +
Sbjct: 582 RHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRR 641
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
+ + +L Y + G C GR EAL + + E + S +I G CK
Sbjct: 642 LIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCK 701
Query: 428 LGELGKAFELMV 439
+L A E+ +
Sbjct: 702 REQLDAAIEVFL 713
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 161/387 (41%), Gaps = 40/387 (10%)
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE- 320
G++ D+ LI+ + K G EKA E M E P+ TY+ ++ + +
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
AF ++ EML SP Y + L+ G S A + D+M +G SP+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGI--------SPNR 233
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
VTY LI G C G ++A + M PD V++N ++ GFCKLG + +AFEL+
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293
Query: 441 MDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRAS 500
++ G + G L +SSL+ GL Y ++A L+ M
Sbjct: 294 FEKDGFVLG--LRGYSSLIDGLFRARRY-------------TQAFELYANMLKKNIKPDI 338
Query: 501 VLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKG 560
+LY +L G K + A + LL S T+ Y+ +I K
Sbjct: 339 ILYTILIQGLSKAGKIEDALK-LLSSMPSKGISPDTYCYNAVI---------------KA 382
Query: 561 FGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASH 620
RGL E S+ + + PD + LI CR V +A ++ E+ G +
Sbjct: 383 LCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPS 442
Query: 621 MFSVLALIKALFHVGRHNEVRRVIQNV 647
+ + ALI L G E R ++ +
Sbjct: 443 VATFNALIDGLCKSGELKEARLLLHKM 469
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 39/235 (16%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVI 134
AY+ L+ ++G P + +YNVL++ +CR +D A+ +L + ++ P+ V++NT+I
Sbjct: 500 KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Query: 135 DGL---------------------------------CAKRRIKEAEELLQEMNSKGLAPD 161
+GL C KR++ A L + K D
Sbjct: 560 NGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLD 619
Query: 162 SVTYNTLITAMSK-NTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVF 220
T N + + T +R + D K + P+T + LI L + +A VF
Sbjct: 620 DETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIW--LIGLCQSGRFHEALMVF 677
Query: 221 TEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
+ + + + +LIH C R+++ A+ +F D +CN L++
Sbjct: 678 SVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLS 732
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 195/418 (46%), Gaps = 28/418 (6%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLC 138
V +M +G P++ TYN L++ VD A + M ++P++V++NT+I G C
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYC 268
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW 198
+ ++A E L++M ++G D +TY T+I A +++ +ALY +M ++ I VP
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG-SCVALYQEMDEKGIQVPP 327
Query: 199 TTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRG 257
++ +I LC +++ Y VF MI G +P++ Y LI Y V+DA+ +
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
M D G PD V + ++ CK G +E+A + G+ N+ YS LID L R
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 318 LSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
+ EA LF EM G + Y Y L+ A+ + +A L M +
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE-------EGCD 500
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
++ TY L+ G R EEAL + M + ++P + + +G C G++ +A ++
Sbjct: 501 QTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKI 560
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
+ E+ G I +D A +IN C G + +A L D + G
Sbjct: 561 LDELAPMGVI--LDAAC--------------EDMINTLCKAGRIKEACKLADGITERG 602
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 157/356 (44%), Gaps = 26/356 (7%)
Query: 166 NTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMI 224
N LI + K +V + ++ +MK+ I TY L++ L+ VD A +VF M
Sbjct: 191 NALIKSFGK-LGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME 249
Query: 225 ASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
+ +P +VTYN +I YC + Q AM R M RG D + T+I +
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG 309
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
+ EM E+GI +S +I LC + +L+E + +F M+ G P Y L+
Sbjct: 310 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 345 GAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILR 404
Y G A L MI +GF PD +VTY+ ++ G C GRVEEAL
Sbjct: 370 DGYAKSGSVEDAIRLLHRMIDEGFKPD--------VVTYSVVVNGLCKNGRVEEALDYFH 421
Query: 405 GMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSD 464
L+ + + Y+ +I G K G + +A L EM E G R D
Sbjct: 422 TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTR---------------D 466
Query: 465 EVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASV-LYIMLFDGFDKKARTRGA 519
YN++I+A+ +V +A+ L ME +V Y +L G K+ R A
Sbjct: 467 SYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 169/376 (44%), Gaps = 27/376 (7%)
Query: 169 ITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASG 227
+ A++K+ + IR ++ ++K+ P+ + +LI V++ V+ +M +G
Sbjct: 161 VLALAKDVDR-IRFVS--SEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 228 FEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAF 287
EP+L TYN L++ V A +F M + PD V NT+I +CK G+ +KA
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 288 EMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAY 347
E +M RG + TY +I L++EM G+ +A+ ++G
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 348 CLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMA 407
C G+ ++ + + + MI KG P++ Y LI G G VE+A+ +L M
Sbjct: 338 CKEGKLNEGYTVFENMIRKGS--------KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 408 EMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVN 467
+ PD V+Y++V++G CK G + +A +D R LA+ S
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEA------LDYFHTCRFDGLAINSMF--------- 434
Query: 468 YNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMF 527
Y+S+I+ G V +A L +EM G R S Y L D F K + A RM
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 528 YDLCTSLPTFTYDTLI 543
+ +TY L+
Sbjct: 495 EEEGCDQTVYTYTILL 510
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 134/269 (49%), Gaps = 19/269 (7%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQN----DNAYKVLSEMVNSGFLPSVA 96
G L + T M RKG P I+ + D ++A ++L M++ GF P V
Sbjct: 341 GKLNEGYTVFENMIRKGSKP--NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV 398
Query: 97 TYNVLLHAYCRDKRVDEAMGILR-----GMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQ 151
TY+V+++ C++ RV+EA+ G+A+ N + ++++IDGL R+ EAE L +
Sbjct: 399 TYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI--NSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHL---L 208
EM+ KG DS YN LI A +K+ V AIAL+ +M+++ T YT I L
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRK-VDEAIALFKRMEEEE-GCDQTVYTYTILLSGMF 514
Query: 209 CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
+ ++A K++ MI G P+ + L C +V A I + G+ DA
Sbjct: 515 KEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAA 574
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERG 297
C +I CK G +++A ++ + ERG
Sbjct: 575 -CEDMINTLCKAGRIKEACKLADGITERG 602
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 141/281 (50%), Gaps = 9/281 (3%)
Query: 51 SEMNRKGLD--PARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRD 108
EM+ KG+ P SL+ C + + + Y V M+ G P+VA Y VL+ Y +
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 109 KRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTY 165
V++A+ +L M E P+VV+++ V++GLC R++EA + GLA +S+ Y
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 166 NTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEM- 223
++LI + K V A L+++M ++ Y +LI + VD+A +F M
Sbjct: 436 SSLIDGLGK-AGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 224 IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGEL 283
G + ++ TY L+ R ++A+ ++ M D+G+TP A L T C G++
Sbjct: 495 EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKV 554
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
+A ++ E+ G++ +A +I+ LC R+ EA L
Sbjct: 555 ARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKL 594
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 172/436 (39%), Gaps = 48/436 (11%)
Query: 111 VDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLIT 170
V + + +L G A S + +DG C K IK L+P+ V++
Sbjct: 86 VSQILNLLDGSA------SMESNLDGFCRKFLIK-------------LSPNFVSFVLKSD 126
Query: 171 AMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFE 229
+ + ++ KQ++ Y SL+ +L +VD+ V +E+ F
Sbjct: 127 EIREKPDIAWSFFCW--SRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFP 184
Query: 230 PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
++ N LI ++ V++ + ++R M + G+ P N L+ ++ A E
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA-ER 243
Query: 290 RAEMVERG-ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYC 348
E++E G I P+ TY+ +I C + +A + R+M G + Y ++ A
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 349 LVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAE 408
+F L EM KG + P ++ +I G C G++ E + M
Sbjct: 304 ADSDFGSCVALYQEMDEKGI------QVPPH--AFSLVIGGLCKEGKLNEGYTVFENMIR 355
Query: 409 MSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNY 468
P+ Y ++I G+ K G + A L+ M + G F D V Y
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG---------FKP------DVVTY 400
Query: 469 NSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFY 528
+ V+N C G V +AL G S+ Y L DG K R A+ M
Sbjct: 401 SVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSE 460
Query: 529 DLCTSLPTFTYDTLIE 544
CT ++ Y+ LI+
Sbjct: 461 KGCTR-DSYCYNALID 475
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 121/297 (40%), Gaps = 41/297 (13%)
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P+L TYN L+ G V+ A + M + PD V+YN +I G+CK G+ KA E
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 279
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
+ +M+ G +D++ Y ++I A A+ + + L+ EM+ G
Sbjct: 280 LRDMETRGH---------------EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324
Query: 498 RASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVEL 557
+ ++ G KE L Y + ++ +I S L
Sbjct: 325 VPPHAFSLVIGGL--------CKEGKLNEGYTV--------FENMIRKGSKPNVAIYTVL 368
Query: 558 AKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGF 617
G+ G +A +L+ ++ +KPD Y+ ++ C+ V++A + + G
Sbjct: 369 IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGL 428
Query: 618 ASHMFSVLALIKALFHVGRHNEVRRVIQNVL-RSCN---------INGFELHKALSE 664
A + +LI L GR +E R+ + + + C I+ F H+ + E
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDE 485
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 167/326 (51%), Gaps = 16/326 (4%)
Query: 59 DPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR-DKRVDEAM 115
DP++++ + +L ++ Q + A+K M G P+VA+ NVL+ A CR D VD +
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 116 GILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM 172
I M +P+ ++ T+I GLC RI EA++L EM K AP VTY +LI +
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 173 SKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVD-KAYKVFTEMIASGFEPS 231
+ N V A+ ++MK + I TY+SL+ LC +A ++F M+A G P+
Sbjct: 238 CGSKN-VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 232 LVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRA 291
+VTY LI C ++Q+A+ + M +GL PDA + +I+ FC + +A
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356
Query: 292 EMVERGILPNADTYS-------KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
EM+ GI PN T++ +++ LC S AF L+ M G+S +LV
Sbjct: 357 EMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLV 415
Query: 345 GAYCLVGEFSKAFHLRDEMIHKGFLP 370
C GEF KA L DE++ G +P
Sbjct: 416 KCLCKKGEFQKAVQLVDEIVTDGCIP 441
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 208/455 (45%), Gaps = 49/455 (10%)
Query: 108 DKRVDEAMGILRGMAVE------PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPD 161
+K V+++M + E + SF ++ L + + K AE+L+ M + +
Sbjct: 26 EKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIE----N 81
Query: 162 SVTYNTLITAMSKNTNLVIR---AIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAY 217
V ++ ++ + V R ++ ++ +MK Y +++ +L N ++ A+
Sbjct: 82 CVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAF 141
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA-MGIFRGMPDRGLTPDAVICNTLITF 276
K + M G P++ + N LI A C D DA + IF MP RG PD+ TLI+
Sbjct: 142 KFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISG 201
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
C++G +++A ++ EMVE+ P TY+ LI+ LC + + EA EM G+ P
Sbjct: 202 LCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPN 261
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
+ Y +L+ C G +A L + M+ +G P++VTY LI G C ++
Sbjct: 262 VFTYSSLMDGLCKDGRSLQAMELFEMMMARGC--------RPNMVTYTTLITGLCKEQKI 313
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG----------- 445
+EA+ +L M L PD Y VISGFC + + +A + EM G
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIH 373
Query: 446 ------GIRGV-------DLAVFSSLM-KGLSDEV-NYNSVINAYCAEGEVSKALILHDE 490
+RG+ ++ S+ +G+S EV S++ C +GE KA+ L DE
Sbjct: 374 VKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDE 433
Query: 491 MEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLR 525
+ G + + + +L K A ++LLR
Sbjct: 434 IVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLR 468
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 175/360 (48%), Gaps = 9/360 (2%)
Query: 95 VATYNVLL---HAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEE 148
V + ++LL Y R R +++ + M +P+ ++ TV+ L + ++ A +
Sbjct: 83 VVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFK 142
Query: 149 LLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL 208
+ M GL P + N LI A+ +N V + ++ +M ++ TY +LI L
Sbjct: 143 FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGL 202
Query: 209 CTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
C + +D+A K+FTEM+ P++VTY LI+ C V +AM M +G+ P+
Sbjct: 203 CRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNV 262
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
++L+ CK G +A E+ M+ RG PN TY+ LI LC ++++ EA +L
Sbjct: 263 FTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDR 322
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
M GL P Y ++ +C + +F +A + DEMI G P+ +T ++ + T N ++
Sbjct: 323 MNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT-WNIHVKTSNEVV 381
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
G C A + M +S + + ++ CK GE KA +L+ E+ G I
Sbjct: 382 RGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI 440
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 145/291 (49%), Gaps = 16/291 (5%)
Query: 52 EMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
EM ++G DP + L+ C + D A K+ +EMV P+V TY L++ C K
Sbjct: 182 EMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSK 241
Query: 110 RVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
VDEAM L M +EPNV ++++++DGLC R +A EL + M ++G P+ VTY
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIA 225
TLIT + K + A+ L D+M Q + Y +I C + +A EMI
Sbjct: 302 TLITGLCKEQK-IQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360
Query: 226 SGFEPSLVTYN-------ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
G P+ +T+N E++ C + A ++ M RG++ + +L+ C
Sbjct: 361 GGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFD-LFREM 328
K GE +KA ++ E+V G +P+ T+ LI + + EA D L R++
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDL 470
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 139/366 (37%), Gaps = 62/366 (16%)
Query: 317 RLSEAFD---LFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
R+ FD +F +M P + AY ++ + + AF M G LP
Sbjct: 98 RVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG-LP--- 153
Query: 374 TEFSPSLVTYNALIYGNCL-LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
P++ + N LI C G V+ L I M + PD +Y +ISG C+ G +
Sbjct: 154 ----PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRID 209
Query: 433 KAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME 492
+A +L EM E V V Y S+IN C V +A+ +EM+
Sbjct: 210 EAKKLFTEMVEKDCAPTV---------------VTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 493 HHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEF 551
G Y L DG K R+ A E M C TY TLI C +
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP-NMVTYTTLITGLCKEQKI 313
Query: 552 KSVVELAKGFGMRGLK-------------------NEAASVLNTVLQWNYKPDGAVYNFL 592
+ VEL ++GLK EAA+ L+ ++ P+ +N
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI- 372
Query: 593 IVEHCRRRN----------VDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRR 642
H + N +A+ +Y+ M G + + ++ +L+K L G + +
Sbjct: 373 ---HVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQ 429
Query: 643 VIQNVL 648
++ ++
Sbjct: 430 LVDEIV 435
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 157/629 (24%), Positives = 271/629 (43%), Gaps = 105/629 (16%)
Query: 79 AYKVLSEMVNS----GFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSF---- 130
A ++S++V+S GF + +N LL+AY +D++ D A+ I+ M +E +V+ F
Sbjct: 143 ASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM-LELDVIPFFPYV 201
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNS----------------------------------- 155
N + L + + EA+EL M +
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP-WTTYTSLIHLLCTY-NV 213
+G PDS+ Y+ + A K +L + A +L +MK++++ VP TYTS+I N+
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAM-ANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
D A ++ EM++ G ++V LI +C + + A+ +F M G +P++V + L
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
I +F K GE+EKA E +M G+ P+ +I ++ EA LF E GL
Sbjct: 381 IEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 440
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
+ + ++ C G+ +A L +M +G P++V+YN ++ G+C
Sbjct: 441 A-NVFVCNTILSWLCKQGKTDEATELLSKMESRG--------IGPNVVSYNNVMLGHCRQ 491
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA 453
++ A + + E L P++ +Y+I+I G + DE + V+
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR------------NHDEQNALEVVNHM 539
Query: 454 VFSSLMKGLSDEVN---YNSVINAYCAEGEVSKALILHDEMEHHGSLRASVL-YIMLFDG 509
S++ EVN Y ++IN C G+ SKA L M L S + Y + DG
Sbjct: 540 TSSNI------EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593
Query: 510 FDKKARTRGAKESLLRMFYDLC---TSLPTFTYDTLIEN-CSNNEFKSVVE--------- 556
F K+ G +S + + ++C S TY +L+ C NN +E
Sbjct: 594 FFKE----GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 557 ----------LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAY 606
L GF R A+++ + +L+ P +YN LI N+ A
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709
Query: 607 NMYMEMVHYGFASHMFSVLALIKALFHVG 635
++Y +M+ G + + LI L G
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 142/600 (23%), Positives = 260/600 (43%), Gaps = 87/600 (14%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----PNVVSFNTVI 134
A +VLS + G P Y++ + A C+ + A +LR M + P+ ++ +VI
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+ + +A L EM S G++ + V +LIT KN +LV A+ L+D+M+++
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLV-SALVLFDKMEKEGP 370
Query: 195 PVPWTTYTSLIHLL-CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
T++ LI ++KA + + +M G PS+ + +I + + ++A+
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
+F + GL + +CNT++++ CK G+ ++A E+ ++M RGI PN +Y+ ++ C
Sbjct: 431 LFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYF-------------------------------- 341
Q+ + A +F +L GL P Y Y
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 342 ---NLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEE 398
++ C VG+ SKA L MI + L S ++YN++I G G ++
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRL-------CVSCMSYNSIIDGFFKEGEMDS 602
Query: 399 ALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSL 458
A+ M +SP+ ++Y +++G CK + +A E+ EM +GV L + +
Sbjct: 603 AVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN----KGVKLDIPA-- 656
Query: 459 MKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRG 518
Y ++I+ +C + A L E+ G + +Y L GF
Sbjct: 657 ---------YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVA 707
Query: 519 AKESLLRMFYD-LCTSLPTFTYDTLIENCSNN-----------EFKSV---------VEL 557
A + +M D L L T+T TLI+ + E ++V +
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYT--TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 558 AKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGF 617
G +G + + + + N P+ +YN +I H R N+D+A+ ++ EM+ G
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 206/450 (45%), Gaps = 45/450 (10%)
Query: 90 GFLPSVATYNVLLHAYCRDKRVDEAMGIL-----RGMAVEPNVVSFNTVIDGLCAKRRIK 144
G PSV + ++ + + ++ +EA+ + G+A NV NT++ LC + +
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA---NVFVCNTILSWLCKQGKTD 460
Query: 145 EAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSL 204
EA ELL +M S+G+ P+ V+YN ++ + N+ + I + +++ P +T Y+ L
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT-YSIL 519
Query: 205 IHLLCTYNVDK--AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM-PDR 261
I C N D+ A +V M +S E + V Y +I+ C + A + M ++
Sbjct: 520 IDG-CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
L + N++I F K GE++ A EM GI PN TY+ L++ LC R+ +A
Sbjct: 579 RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQA 638
Query: 322 FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
++ EM G+ AY L+ +C A L E++ +G +PS
Sbjct: 639 LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL--------NPSQP 690
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
YN+LI G LG + AL + + M + L D +Y +I G K G L A EL EM
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750
Query: 442 DEAGGIRGVDLAVFSSLMKGLSDE----------------------VNYNSVINAYCAEG 479
G + D +++ ++ GLS + + YN+VI + EG
Sbjct: 751 QAVGLVP--DEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDG 509
+ +A LHDEM G L + +L G
Sbjct: 809 NLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 186/394 (47%), Gaps = 49/394 (12%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVD------------------ 112
C Q + D A ++LS+M + G P+V +YN ++ +CR K +D
Sbjct: 454 CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN 513
Query: 113 -----------------EAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
A+ ++ M +E N V + T+I+GLC + +A ELL
Sbjct: 514 YTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLAN 573
Query: 153 M-NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY 211
M K L ++YN++I K + A+A Y++M I TYTSL++ LC
Sbjct: 574 MIEEKRLCVSCMSYNSIIDGFFKEGEM-DSAVAAYEEMCGNGISPNVITYTSLMNGLCKN 632
Query: 212 N-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVIC 270
N +D+A ++ EM G + + Y LI +C R ++ A +F + + GL P I
Sbjct: 633 NRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIY 692
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
N+LI+ F G + A ++ +M++ G+ + TY+ LID L L A +L+ EM
Sbjct: 693 NSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQA 752
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
GL P E Y +V G+F K + +EM +P+++ YNA+I G+
Sbjct: 753 VGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN--------VTPNVLIYNAVIAGH 804
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
G ++EA + M + + PD +++I++SG
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 171/376 (45%), Gaps = 43/376 (11%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATY 98
G + T +S+M +G+ P S +++ C Q D A V S ++ G P+ TY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 99 NVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEM-N 154
++L+ R+ A+ ++ M +E N V + T+I+GLC + +A ELL M
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-V 213
K L ++YN++I K + A+A Y++M I TYTSL++ LC N +
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEM-DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
D+A ++ EM G + + Y LI +C R ++ A +F + + GL P I N+L
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
I+ F G + A ++ +M++ G+ + TY+ LID L L A +L+ EM GL
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 334 SPREYAYFNLVGAYCLVGEFSK-----------------------------------AFH 358
P E Y +V G+F K AF
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFR 815
Query: 359 LRDEMIHKGFLPDFVT 374
L DEM+ KG LPD T
Sbjct: 816 LHDEMLDKGILPDGAT 831
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 198/463 (42%), Gaps = 48/463 (10%)
Query: 227 GFEPSLVTYNELIHAYCCRDRVQD-AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
GFE + +N L++AY +DR D A+ I M + + P N ++ + L +
Sbjct: 158 GFEVNSRAFNYLLNAY-SKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTE 216
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
A E+ + MV G+ + T L+ + + +EA ++ + G P Y V
Sbjct: 217 AKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQ 276
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
A C + + A L EM K PS TY ++I + G +++A+ +
Sbjct: 277 ACCKTLDLAMANSLLREMKEKKLC-------VPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE 465
M +S + V+ +I+G CK +L A L +M++ G +
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS---------------PNS 374
Query: 466 VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYI-MLFDGFDKKARTRGAKESLL 524
V ++ +I + GE+ KAL + +ME G L SV ++ + G+ K + E L
Sbjct: 375 VTFSVLIEWFRKNGEMEKALEFYKKMEVLG-LTPSVFHVHTIIQGWLKGQK----HEEAL 429
Query: 525 RMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKP 584
++F + S T + + N + +G +EA +L+ + P
Sbjct: 430 KLFDE---SFETGLANVFVCNT----------ILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 585 DGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRV- 643
+ YN +++ HCR++N+D A ++ ++ G + ++ LI F H+E +
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR--NHDEQNALE 534
Query: 644 IQNVLRSCNI--NGFELHKALSETGVIVREDKVKDVLLNVLAE 684
+ N + S NI NG ++ + + K +++L N++ E
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 191/414 (46%), Gaps = 32/414 (7%)
Query: 41 GGLLKTTTTVSEMNRK-GLDPARESLIHLLCCDQLQN--------DNAYKVLSEMVNSGF 91
G++ + V E R GL P HL C L N D +K+ +MV G
Sbjct: 146 AGMINDSIVVFEQIRSCGLKP------HLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGV 199
Query: 92 LPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEE 148
+ ++ YNVL+HA + ++A +L M V P++ ++NT+I C K EA
Sbjct: 200 VANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALS 259
Query: 149 LLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL 208
+ M G+AP+ VTYN+ I S+ + A L+ ++K + TYT+LI
Sbjct: 260 VQDRMERSGVAPNIVTYNSFIHGFSREGRMR-EATRLFREIKDD-VTANHVTYTTLIDGY 317
Query: 209 CTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
C N +D+A ++ M + GF P +VTYN ++ C R+++A + M + + PD
Sbjct: 318 CRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN 377
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
+ CNTLI +CK ++ A +++ +M+E G+ + +Y LI C L A +
Sbjct: 378 ITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
M+ G SP Y LV + + + L +E +G D + Y LI
Sbjct: 438 MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD--------VALYRGLI 489
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA---FELM 438
C L +V+ A + M + L D V + + + + G++ +A F++M
Sbjct: 490 RRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 159/336 (47%), Gaps = 8/336 (2%)
Query: 40 SGGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVA 96
SG K +SEM KG+ P +LI + C + + A V M SG P++
Sbjct: 216 SGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFE-ALSVQDRMERSGVAPNIV 274
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGMA--VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
TYN +H + R+ R+ EA + R + V N V++ T+IDG C I EA L + M
Sbjct: 275 TYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVME 334
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NV 213
S+G +P VTYN+++ + ++ + A L +M ++I T +LI+ C ++
Sbjct: 335 SRGFSPGVVTYNSILRKLCEDGR-IREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDM 393
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
A KV +MI SG + + +Y LIH +C +++A M ++G +P + L
Sbjct: 394 VSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWL 453
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
+ F + ++ ++ E +RG+ + Y LI +C ++ A LF M GL
Sbjct: 454 VDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
+ + AY G+ ++A L D M ++ +
Sbjct: 514 VGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLM 549
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 186/455 (40%), Gaps = 53/455 (11%)
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
++ L+ Y + D++ +F + GL P C L+ K + +++ +MV
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
+ G++ N Y+ L+ +A L EM G+ P + Y L+ YC
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
+A ++D M G +P++VTYN+ I+G GR+ EA + R + + ++ +
Sbjct: 256 EALSVQDRMERSG--------VAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTAN 306
Query: 415 DVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL------------ 462
V+Y +I G+C++ ++ +A L M+ G GV ++S+++ L
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGV--VTYNSILRKLCEDGRIREANRL 364
Query: 463 ----------SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
D + N++INAYC ++ A+ + +M G Y L GF K
Sbjct: 365 LTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCK 424
Query: 513 KARTRGAKESLLRMFYDLCTSLPTF-TYDTLIENCSN-NEFKSVVELAKGFGMRGLKNEA 570
AKE L M + P + TY L++ N N+ + +L + F RGL
Sbjct: 425 VLELENAKEELFSMIEKGFS--PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL---- 478
Query: 571 ASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKA 630
D A+Y LI C+ VD A ++ M G + A
Sbjct: 479 ------------CADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYA 526
Query: 631 LFHVGRHNEVRRVIQNVLRSCNINGFELHKALSET 665
+ G+ E + + + +L+K++S +
Sbjct: 527 YWRTGKVTEASALFDVMYNRRLMVNLKLYKSISAS 561
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 158/683 (23%), Positives = 298/683 (43%), Gaps = 81/683 (11%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR----GMAVEPNVVSF 130
+N A V +M++ P V T +++++AYCR VD+AM + + +E NVV++
Sbjct: 205 ENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTY 264
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
N++I+G ++ +L+ M+ +G++ + VTY +LI K L+ A +++ +K
Sbjct: 265 NSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKK-GLMEEAEHVFELLK 323
Query: 191 QQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
++++ Y L+ C T + A +V MI G + N LI+ YC ++
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+A IF M D L PD NTL+ +C+ G +++A ++ +M ++ ++P TY+ L+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
+ L++ ML G++ E + L+ A +G+F++A L + ++ +G L
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 370 PDFVT---------------------------EFSPSLVTYNALIYGNCLLGRVEEALGI 402
D +T P++ TY AL +G +G ++EA +
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
M + P YN +ISG K L K +L++E+ G V A + +L+ G
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTV--ATYGALITGW 621
Query: 463 SDEVNYNSVINAY--CAE-------------GEVSKALILHDEMEHHGSLRASVL-YIML 506
N + AY C E +++ +L D+++ L ++ + +L
Sbjct: 622 C---NIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLL 678
Query: 507 FDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGL 566
G+ A + + S+ T L+ NN +V G G
Sbjct: 679 LPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLL--VPNNIVYNVA--IAGLCKAGK 734
Query: 567 KNEAASVLNTVLQWN-YKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVL 625
+A + + +L + + PD Y LI +++KA+ + EM G ++ +
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYN 794
Query: 626 ALIKALFHVGRHNEVRR-------------------VIQNVLRSCNI-NGFELHKALSET 665
ALIK L +G + +R +I +++S N+ L + + E
Sbjct: 795 ALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 854
Query: 666 GVIVREDKVKDVLLNVLAEIAMD 688
G++ DK DV ++ E+ +D
Sbjct: 855 GLVRGSDKQGDV--DIPKEVVLD 875
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 135/582 (23%), Positives = 245/582 (42%), Gaps = 51/582 (8%)
Query: 76 NDNAYKVLSEMVNS----GFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFN 131
N + + V E+V F P+V ++++L Y V A+ + M + S
Sbjct: 134 NHSGFVVWGELVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLL 191
Query: 132 TVIDGLCAKRRIKE---AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
+ L R E A + +M S ++PD T + ++ A ++ N+ + +
Sbjct: 192 SCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKET 251
Query: 189 MKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
+ + TY SLI+ +V+ +V M G ++VTY LI YC +
Sbjct: 252 ESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGL 311
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
+++A +F + ++ L D + L+ +C+ G++ A + M+E G+ N +
Sbjct: 312 MEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNS 371
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
LI+ C +L EA +F M L P + Y LV YC G +A L D+M K
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK- 430
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
E P+++TYN L+ G +G + L + + M + ++ D++S + ++ K
Sbjct: 431 -------EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALIL 487
LG+ +A +L E RG+ L+D + N +I+ C +V++A +
Sbjct: 484 LGDFNEAMKLW----ENVLARGL-----------LTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 488 HDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF-TYDTLIENC 546
D + A Y L G+ K + A ++ + + PT Y+TLI
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA--FAVKEYMERKGIFPTIEMYNTLI--- 583
Query: 547 SNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAY 606
+ F R L N+ A ++ + P A Y LI C +DKAY
Sbjct: 584 -----------SGAFKYRHL-NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 607 NMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL 648
EM+ G ++ + +LF + + +E ++Q ++
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 673
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 23/275 (8%)
Query: 45 KTTTTVSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLL 102
K V E+ +GL P + L+ C+ D AY EM+ G +V + +
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653
Query: 103 HAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDG-------------LCAKRRIKEAEEL 149
++ R ++DEA +L+ +V F+ ++ G C K + K AE +
Sbjct: 654 NSLFRLDKIDEACLLLQ------KIVDFDLLLPGYQSLKEFLEASATTCLKTQ-KIAESV 706
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LL 208
K L P+++ YN I + K L D + R TYT LIH
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766
Query: 209 CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
+++KA+ + EM G P++VTYN LI C V A + +P +G+TP+A+
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 826
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
NTLI K G + +A ++ +M+E+G++ +D
Sbjct: 827 TYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSD 861
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 120/541 (22%), Positives = 208/541 (38%), Gaps = 153/541 (28%)
Query: 190 KQQRIPVPWTTYTSLIHLLC---TYNVDKAYKVFTEMIA---SGFEPSLVTYNELIHAYC 243
KQQ+ + Y ++H+L Y K+Y E++A SGF V + EL+ +
Sbjct: 96 KQQKFRPDYKAYCKMVHILSRARNYQQTKSY--LCELVALNHSGF----VVWGELVRVF- 148
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
+ + + + ++ + + G ++ A + M G +P+
Sbjct: 149 -----------------KEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLL 191
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
+ + L+ L + A ++ +M+ +SP + +V AYC G KA E
Sbjct: 192 SCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKE- 250
Query: 364 IHKGFLPDFVTEFSPSL----VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
TE S L VTYN+LI G ++G VE +LR M+E +S + V+Y
Sbjct: 251 ----------TESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYT 300
Query: 420 IVISGFCKLGELGKA---FELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYC 476
+I G+CK G + +A FEL+ E K ++D+ Y +++ YC
Sbjct: 301 SLIKGYCKKGLMEEAEHVFELLKEK------------------KLVADQHMYGVLMDGYC 342
Query: 477 AEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPT 536
G++ A+ +HD M G +R +C SL
Sbjct: 343 RTGQIRDAVRVHDNMIEIG----------------------------VRTNTTICNSL-- 372
Query: 537 FTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEH 596
G+ G EA + + + W+ KPD YN L+ +
Sbjct: 373 ---------------------INGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 597 CRRRNVDKA------------------YNMYME-----------------MVHYGFASHM 621
CR VD+A YN+ ++ M+ G +
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 622 FSVLALIKALFHVGRHNEVRRVIQNVL-RSCNINGFELHKALSETGVIVREDKVKDVLLN 680
S L++ALF +G NE ++ +NVL R + L+ +S + + ++ K++L N
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 681 V 681
V
Sbjct: 532 V 532
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 162/621 (26%), Positives = 260/621 (41%), Gaps = 67/621 (10%)
Query: 61 ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYN--VLLHAYCRDKRVDEAMGIL 118
A SL+ LL + D A KV EM + G SV Y+ +L+ C + +V+ ++
Sbjct: 172 ACNSLLSLLVKSRRLGD-ARKVYDEMCDRG--DSVDNYSTCILVKGMCNEGKVEVGRKLI 228
Query: 119 RGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN 175
G + PN+V +NT+I G C I+ A + +E+ KG P T+ T+I K
Sbjct: 229 EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKE 288
Query: 176 TNLVIRAIALYDQMKQQRIPVPWTTYTSLI--HLLCTYNVDKAYKVFTEMIASGFEPSLV 233
+ V + L ++K++ + V ++I Y VD A + +IA+ +P +
Sbjct: 289 GDFVA-SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVA 346
Query: 234 TYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM 293
TYN LI+ C + + A+G +GL P+ + LI +CK E + A ++ +M
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 294 VERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEF 353
ERG P+ TY LI L + +A ++ +++ G+SP Y L+ C G F
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 354 SKAFHLRDEMIHKGFLPD----------FVTE---------FSPS--------LVTYNAL 386
A L EM+ + LPD F+ FS S +V +NA+
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526
Query: 387 IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGG 446
I G C G ++EAL + M E L PD +Y+ +I G+ K ++ A ++ M++
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN-- 584
Query: 447 IRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIML 506
K + V Y S+IN +C +G+ A EM+ + V Y L
Sbjct: 585 -------------KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTL 631
Query: 507 FDGFDKKART-RGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRG 565
K++ T A M + C T++ L++ V+ G
Sbjct: 632 IRSLAKESSTLEKAVYYWELMMTNKCVP-NEVTFNCLLQGFVKKTSGKVLAEPDG----- 685
Query: 566 LKNEAASVLNTVLQWNYKPDG-----AVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASH 620
N S L + K DG A YN +V C V A +MV GF+
Sbjct: 686 -SNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPD 744
Query: 621 MFSVLALIKALFHVGRHNEVR 641
S A++ VG + R
Sbjct: 745 PVSFAAILHGFCVVGNSKQWR 765
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 216/493 (43%), Gaps = 38/493 (7%)
Query: 101 LLHAYCRDKRVDEAMGILRGMAVE-----PNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
+LHAY + +A+ I VE P+V++ N+++ L RR+ +A ++ EM
Sbjct: 140 VLHAYAESGSLSKAVEIY-DYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCD 198
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVD 214
+G + D+ + L+ M + + + + + IP Y ++I C +++
Sbjct: 199 RGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIP-NIVFYNTIIGGYCKLGDIE 257
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
AY VF E+ GF P+L T+ +I+ +C + + + +RGL N +I
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
++G E ++ P+ TY+ LI+ LC + + A E GL
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
P +Y L+ AYC E+ A L +M +G PD +VTY LI+G + G
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD--------IVTYGILIHGLVVSG 429
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA---------- 444
+++A+ + + + +SPD YN+++SG CK G A L EM +
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 445 ----GGIRGVDL----AVFS-SLMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
G IR D VFS S+ KG+ D V++N++I +C G + +AL + M
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKS 553
+ Y + DG+ K+ A + M + C TY +LI C +FK
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP-NVVTYTSLINGFCCQGDFKM 608
Query: 554 VVELAKGFGMRGL 566
E K +R L
Sbjct: 609 AEETFKEMQLRDL 621
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 199/471 (42%), Gaps = 67/471 (14%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNV 127
C + + + A L E G +P+ +Y L+ AYC+ K D A +L MA +P++
Sbjct: 356 CKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V++ +I GL + +A + ++ +G++PD+ YN L++ + K T + A L+
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK-TGRFLPAKLLFS 474
Query: 188 QMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M + I Y +LI + + + D+A KVF+ + G + +V +N +I +C
Sbjct: 475 EMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSG 534
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ +A+ M + L PD +T+I + K ++ A ++ M + PN TY+
Sbjct: 535 MLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYT 594
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS---KAFHLRDEM 363
LI+ C Q A + F+EM L P Y L+ + L E S KA + + M
Sbjct: 595 SLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS--LAKESSTLEKAVYYWELM 652
Query: 364 IHKGFLPDFVT--------------------------------EF---------SPSLVT 382
+ +P+ VT EF S
Sbjct: 653 MTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAA 712
Query: 383 YNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
YN+ + C+ G V+ A M + SPD VS+ ++ GFC +G
Sbjct: 713 YNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG------------- 759
Query: 443 EAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKA-LILHDEME 492
+ R +D KGL V Y+ V+ + + + +A ILH +E
Sbjct: 760 NSKQWRNMDFCNLGE--KGLEVAVRYSQVLEQHLPQPVICEASTILHAMVE 808
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 194/467 (41%), Gaps = 72/467 (15%)
Query: 200 TYTSLIHLLCTY----NVDKAYKVFTEMIA-SGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
T+ +L H+L Y ++ KA +++ ++ P ++ N L+ R+ DA +
Sbjct: 133 THEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKV 192
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
+ M DRG + D L+ C G++E ++ +G +PN Y+ +I C
Sbjct: 193 YDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCK 252
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG------F 368
+ A+ +F+E+ G P + ++ +C G+F + L E+ +G F
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 369 LPDFV---------------------TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMA 407
L + + + P + TYN LI C G+ E A+G L +
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 408 EMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL----- 462
+ L P+++SY +I +CK E A +L+++M E G D+ + L+ GL
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC--KPDIVTYGILIHGLVVSGH 430
Query: 463 -SDEVN----------------YNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIM 505
D VN YN +++ C G A +L EM L + +Y
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Query: 506 LFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRG 565
L DGF + A++ + + + + ++ +I KGF G
Sbjct: 491 LIDGFIRSGDFDEARK-VFSLSVEKGVKVDVVHHNAMI---------------KGFCRSG 534
Query: 566 LKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
+ +EA + +N + + + PD Y+ +I + +++++ A ++ M
Sbjct: 535 MLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 142/384 (36%), Gaps = 61/384 (15%)
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
K F+ + + N S + L R +E D+ + + A +++
Sbjct: 82 KLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVL 141
Query: 345 GAYCLVGEFSKAFHLRDEMIH-KGFLPDFVT-------------------------EFSP 378
AY G SKA + D ++ +PD + +
Sbjct: 142 HAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGD 201
Query: 379 SLVTYNA--LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
S+ Y+ L+ G C G+VE ++ G P+ V YN +I G+CKLG++ A+
Sbjct: 202 SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYL 261
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGS 496
+ E+ G + ++ + ++IN +C EG+ + L E++ G
Sbjct: 262 VFKELKLKGFMPTLE---------------TFGTMINGFCKEGDFVASDRLLSEVKERG- 305
Query: 497 LRASVLYI-MLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVV 555
LR SV ++ + D + ES+ + + C TY+ LI
Sbjct: 306 LRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKP-DVATYNILIN----------- 353
Query: 556 ELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHY 615
L K G K A L+ + P+ Y LI +C+ + D A + ++M
Sbjct: 354 RLCK----EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER 409
Query: 616 GFASHMFSVLALIKALFHVGRHNE 639
G + + LI L G ++
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDD 433
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 142/580 (24%), Positives = 266/580 (45%), Gaps = 75/580 (12%)
Query: 100 VLLHAYCRDKRVDEAMGILRG-MAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL 158
V++H +R D+A+ I+ M+VE +S V+ GL ++ + G
Sbjct: 99 VMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGL------------IRSYQACGS 146
Query: 159 APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL-CTYNV---D 214
+PD +++L+ A ++N + A Y+ ++Q R + +L + + C NV D
Sbjct: 147 SPD--VFDSLVRACTQNGD----AQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEID 200
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
+ +KV+ EM + G+ ++ T+N +I+++C ++ +A+ +F M G+ P+ V N +I
Sbjct: 201 RFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMI 260
Query: 275 TFFCKYGELEKAFEMRAEM-VERG--ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
CK G++ A ++ +M + G + PNA TY+ +I+ C RL A + +M+
Sbjct: 261 DGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKS 320
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
G+ E Y LV AY G +A L DEM KG + + V YN+++Y
Sbjct: 321 GVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVN--------TVIYNSIVYWLF 372
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGV- 450
+ G +E A+ +LR M ++ D + IV+ G C+ G + +A E ++ E + +
Sbjct: 373 MEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIV 432
Query: 451 ------------------DLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEM 491
D + S L++GLS D +++ ++I+ Y EG++ +AL ++D M
Sbjct: 433 CHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGM 492
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM--FYDLCT-------SLPTFTY--- 539
V+Y + +G K+ GA E+++ D+ T SL T
Sbjct: 493 IKMNKTSNLVIYNSIVNGLSKRGMA-GAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEA 551
Query: 540 DTLIENCSNNEFKSVVELAKGFGMR-------GLKNEAASVLNTVLQWNYKPDGAVYNFL 592
D ++ + + V L F + G +A VL +++ PD Y L
Sbjct: 552 DDILSKMQKQDGEKSVSLVT-FNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 593 IVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALF 632
I + R+ +K ++ ++ G H L++++ L
Sbjct: 611 ITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 246/533 (46%), Gaps = 64/533 (12%)
Query: 1 MSPLLRAFRRHIVRNSGMTRGFTAAAAAGSL-ESEPKKVTSGGLLKTTTTVSEMNR-KGL 58
+SPL H++ SG+ R + A ++ + +S + T G + V E R +G
Sbjct: 128 LSPL------HVL--SGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGF 179
Query: 59 DPARESLIHLLCC--DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMG 116
+ +L + + C + + D +KV EM + G++ +V T+N++++++C++ ++ EA+
Sbjct: 180 CVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALS 239
Query: 117 ILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM---NSKGLAPDSVTYNTLIT 170
+ M V PNVVSFN +IDG C ++ A +LL +M + ++P++VTYN++I
Sbjct: 240 VFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVIN 299
Query: 171 AMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFE 229
K L + A + M + + TY +L+ + D+A ++ EM + G
Sbjct: 300 GFCKAGRLDL-AERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLV 358
Query: 230 PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
+ V YN +++ ++ AM + R M + + D ++ C+ G +++A E
Sbjct: 359 VNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEF 418
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL 349
+ ++ E+ ++ + ++ L+ ++L+ A + ML GLS ++ L+ Y
Sbjct: 419 QRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLK 478
Query: 350 VGEFSKAFHLRDEMIHKGFLPDFVTEFS-----------------------PSLVTYNAL 386
G+ +A + D MI + V S +VTYN L
Sbjct: 479 EGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTL 538
Query: 387 IYGNCLLGRVEEALGILRGM----AEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
+ + G VEEA IL M E S+S V++NI+I+ CK G KA E++ M
Sbjct: 539 LNESLKTGNVEEADDILSKMQKQDGEKSVSL--VTFNIMINHLCKFGSYEKAKEVLKFMV 596
Query: 443 EAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
E RGV + D + Y ++I ++ K + LHD + G
Sbjct: 597 E----RGV-----------VPDSITYGTLITSFSKHRSQEKVVELHDYLILQG 634
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 131/274 (47%), Gaps = 11/274 (4%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEP---NVVSFNTV 133
+ A VL +M + T +++ CR+ V EA+ R ++ + ++V NT+
Sbjct: 378 EGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTL 437
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ +++ A+++L M +GL+ D++++ TLI K L RA+ +YD M +
Sbjct: 438 MHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLE-RALEIYDGMIKMN 496
Query: 194 IPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFE-PSLVTYNELIHAYCCRDRVQDAM 252
Y S+++ L + A E + + E +VTYN L++ V++A
Sbjct: 497 KTSNLVIYNSIVNGLSKRGMAGA----AEAVVNAMEIKDIVTYNTLLNESLKTGNVEEAD 552
Query: 253 GIFRGMP--DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
I M D + V N +I CK+G EKA E+ MVERG++P++ TY LI
Sbjct: 553 DILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLIT 612
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
R + +L ++ G++P E+ Y ++V
Sbjct: 613 SFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 165/328 (50%), Gaps = 9/328 (2%)
Query: 52 EMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRD 108
+M + G++P SL++ C D Y V +M G V +L+ C++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVY-VAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 109 KRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTY 165
+ V A+ +L+ M + PNVV+++++I GLC R+ +AE L EM+SK + P+ +T+
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 166 NTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMI 224
+ LI A +K L + ++Y M Q I TY+SLI+ LC +N VD+A K+ MI
Sbjct: 122 SALIDAYAKRGKLS-KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 225 ASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
+ G P++VTY+ L + + RV D + + MP RG+ + V CNTLI + + G+++
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
A + M G++PN +Y+ ++ L + +A F M Y ++
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 345 GAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C +A+ L ++ K PDF
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFKRVEPDF 328
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 168/349 (48%), Gaps = 13/349 (3%)
Query: 85 EMVNSGFLPSVATYNVLLHAYCRDKRVDEAM---GILRGMAVEPNVVSFNTVIDGLCAKR 141
+M+ G P + T + L++ +C + +A+ G + M ++ +VV +ID LC R
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
+ A E+L+ M +G++P+ VTY++LIT + K+ L L+ +M ++I T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLH-EMDSKKINPNVITF 121
Query: 202 TSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
++LI + K V+ MI +P++ TY+ LI+ C +RV +A+ + M
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
+G TP+ V +TL F K ++ ++ +M +RG+ N + + LI ++
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A +F M GL P +Y ++ GE KA R E + K T +
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALS-RFEHMQK-------TRNDLDI 293
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+TY +I+G C V+EA + + + PD +Y I+I+ + G
Sbjct: 294 ITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 156/329 (47%), Gaps = 32/329 (9%)
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYG 281
+M+ G EP +VT + L++ +C + ++DA+ + M G+ D V+ LI CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 282 ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYF 341
+ A E+ M +RGI PN TYS LI LC RL++A EM ++P +
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 342 NLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALG 401
L+ AY G+ SK + MI P++ TY++LIYG C+ RV+EA+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQ--------MSIDPNVFTYSSLIYGLCMHNRVDEAIK 174
Query: 402 ILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGG----------IRG-- 449
+L M +P+ V+Y+ + +GF K + +L+ +M + G I+G
Sbjct: 175 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
Query: 450 ----VDLA--VFSSLMK-GLSDEV-NYNSVINAYCAEGEVSKALILHDEMEHHGSLRASV 501
+DLA VF + GL + +YN V+ A GEV KAL + M+ + +
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 294
Query: 502 LYIMLFDGFDKKARTRGAKESLLRMFYDL 530
Y ++ G K + A + +FY L
Sbjct: 295 TYTIMIHGMCKACMVKEAYD----LFYKL 319
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 146/342 (42%), Gaps = 45/342 (13%)
Query: 121 MAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
+ +EP++V+ +++++G C IK+A + +M G+ D V LI + KN
Sbjct: 7 LGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN----- 61
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIH 240
R+ VP A +V M G P++VTY+ LI
Sbjct: 62 ------------RLVVP------------------ALEVLKRMKDRGISPNVVTYSSLIT 91
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
C R+ DA M + + P+ + + LI + K G+L K + M++ I P
Sbjct: 92 GLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDP 151
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
N TYS LI LC R+ EA + M+ G +P Y L + L
Sbjct: 152 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 211
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
D+M +G + + V+ N LI G G+++ ALG+ M L P+ SYNI
Sbjct: 212 DDMPQRG--------VAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 263
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
V++G GE+ KA M + +D+ ++ ++ G+
Sbjct: 264 VLAGLFANGEVEKALSRFEHMQKTRN--DLDIITYTIMIHGM 303
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 50 VSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYC 106
+ M +G+ P SLI LC D A + L EM + P+V T++ L+ AY
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLAD-AERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 107 RD---KRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSV 163
+ +VD ++ M+++PNV +++++I GLC R+ EA ++L M SKG P+ V
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 164 TYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEM 223
TY+TL K++ VD K+ +M
Sbjct: 190 TYSTLANGFFKSS-----------------------------------RVDDGIKLLDDM 214
Query: 224 IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGEL 283
G + V+ N LI Y ++ A+G+F M GL P+ N ++ GE+
Sbjct: 215 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 274
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
EKA M + + TY+ +I +C + EA+DLF ++ + P AY
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY 331
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 175/346 (50%), Gaps = 18/346 (5%)
Query: 80 YKVLSEMVNS---GFLPSVATYNVLLHAYCRDKRVDEAM---GILRGMAVEPNVVSFNTV 133
YK++ +++N+ + +V T+ +++ Y R ++VDEA+ ++ + PN+V+FN +
Sbjct: 150 YKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGL 209
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ LC + +++A+E+ + M + PDS TY+ L+ K NL +A ++ +M
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLP-KAREVFREMIDAG 267
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
TY+ ++ +LC VD+A + M S +P+ Y+ L+H Y +R+++A+
Sbjct: 268 CHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAV 327
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
F M G+ D + N+LI FCK ++ + + EM +G+ PN+ + + ++ L
Sbjct: 328 DTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHL 387
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
+ EAFD+FR+M+ P Y ++ +C E A + M KG
Sbjct: 388 IERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF--- 443
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
PS+ T++ LI G C ++A +L M EM + P V++
Sbjct: 444 -----PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 160/375 (42%), Gaps = 32/375 (8%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK--NTNLVIR 181
E +V +++ +I+ R+ K +L+ M K + + T M K V
Sbjct: 131 EHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM----LNVETFCIVMRKYARAQKVDE 186
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIH 240
AI ++ M++ +P + L+ LC + NV KA +VF M F P TY+ L+
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLE 245
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
+ + A +FR M D G PD V + ++ CK G +++A + M P
Sbjct: 246 GWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKP 305
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
YS L+ + RL EA D F EM G+ + +L+GA+C + +
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL 365
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
EM KG +P+ + N ++ G +EA + R M ++ PD +Y +
Sbjct: 366 KEMKSKG--------VTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTM 416
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGE 480
VI FC+ E+ A ++ M + G VF S+ ++ +IN C E
Sbjct: 417 VIKMFCEKKEMETADKVWKYMRKKG--------VFPSMH-------TFSVLINGLCEERT 461
Query: 481 VSKALILHDEMEHHG 495
KA +L +EM G
Sbjct: 462 TQKACVLLEEMIEMG 476
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 122/244 (50%), Gaps = 6/244 (2%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
A +V EM+++G P + TY++++ C+ RVDEA+GI+R M +P ++ ++
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+ R++EA + EM G+ D +N+LI A K N + + +MK + +
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK-ANRMKNVYRVLKEMKSKGV 373
Query: 195 -PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
P + L HL+ D+A+ VF +MI EP TY +I +C + ++ A
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADK 432
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
+++ M +G+ P + LI C+ +KA + EM+E GI P+ T+ +L L
Sbjct: 433 VWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLI 492
Query: 314 PQRR 317
+ R
Sbjct: 493 KEER 496
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 7/189 (3%)
Query: 39 TSGGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSV 95
T L + T EM R G+ SLI C + N Y+VL EM + G P+
Sbjct: 319 TENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC-KANRMKNVYRVLKEMKSKGVTPNS 377
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGM--AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
+ N++L DEA + R M EP+ ++ VI C K+ ++ A+++ + M
Sbjct: 378 KSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYM 437
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV 213
KG+ P T++ LI + + +A L ++M + I T+ L LL
Sbjct: 438 RKKGVFPSMHTFSVLINGLCEERT-TQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Query: 214 DKAYKVFTE 222
+ K E
Sbjct: 497 EDVLKFLNE 505
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 114/273 (41%), Gaps = 40/273 (14%)
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
+ P+LV +N L+ C V +A + M + +PD +Y+I++ G+ K L KA
Sbjct: 198 DLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKA 256
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
E+ EM +AG D V Y+ +++ C G V +AL + M+
Sbjct: 257 REVFREMIDAGC---------------HPDIVTYSIMVDILCKAGRVDEALGIVRSMDPS 301
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLI-ENCSNNEFKS 553
+ +Y +L + + R A ++ L M + +++LI C N K+
Sbjct: 302 ICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKA-DVAVFNSLIGAFCKANRMKN 360
Query: 554 VVELAKGFGMRGL-------------------KNEAASVLNTVLQWNYKPDGAVYNFLIV 594
V + K +G+ K+EA V +++ +PD Y +I
Sbjct: 361 VYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIK 419
Query: 595 EHCRRRNVDKAYNMYMEMVHYG-FAS-HMFSVL 625
C ++ ++ A ++ M G F S H FSVL
Sbjct: 420 MFCEKKEMETADKVWKYMRKKGVFPSMHTFSVL 452
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 184/410 (44%), Gaps = 33/410 (8%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
+ A +L + + G LP V TYN L+ Y R +DEA + R M +EP+V ++N++
Sbjct: 30 ERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSL 89
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I G + +L EM GL+PD +YNTL++ K L++ +
Sbjct: 90 ISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAG 149
Query: 194 IPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ TY L+ LC + + D A ++F + S +P L+TYN LI+ C RV
Sbjct: 150 LVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVD 208
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ R + G TP+AV T++ + K +EK ++ +M + G + ++ L
Sbjct: 209 WMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSAL 268
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFN-LVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
R EA++ E++ G ++ +N L+ Y G L +E+ KG PD
Sbjct: 269 IKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPD 328
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
+++ +++ L GN G E+ L + EM + P V+ N +I G CK G +
Sbjct: 329 ---DYTHTIIVNGLLNIGNT--GGAEKHLACI---GEMGMQPSVVTCNCLIDGLCKAGHV 380
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEV 481
+A L M+ + DE Y SV++ C +G +
Sbjct: 381 DRAMRLFASME-------------------VRDEFTYTSVVHNLCKDGRL 411
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 200/445 (44%), Gaps = 39/445 (8%)
Query: 92 LPSVAT--YNVLLHAYCRDKRVDEAMGILRG---MAVEPNVVSFNTVIDGLCAKRRIKEA 146
P ++T N+ +++ C+ + ++ A +L + V P+V+++NT+I G I EA
Sbjct: 8 FPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 67
Query: 147 EELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
+ + M G+ PD TYN+LI+ +KN ++ R + L+D+M + +Y +L+
Sbjct: 68 YAVTRRMREAGIEPDVTTYNSLISGAAKNL-MLNRVLQLFDEMLHSGLSPDMWSYNTLMS 126
Query: 207 LLCTYNVDK---AYKVFTEMIA-SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG 262
C + + + A+K+ E I +G P + TYN L+ A C +A+ +F+ + R
Sbjct: 127 --CYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR- 183
Query: 263 LTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
+ P+ + N LI CK + M E+ + G PNA TY+ ++ +R+ +
Sbjct: 184 VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGL 243
Query: 323 DLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVT 382
LF +M G + +A +V A G +A+ E++ G S +V+
Sbjct: 244 QLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG-------TRSQDIVS 296
Query: 383 YNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
YN L+ G ++ +L + L PDD ++ I+++G +G G A + + +
Sbjct: 297 YNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIG 356
Query: 443 EAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVL 502
E G V V N +I+ C G V +A+ L ME +R
Sbjct: 357 EMGMQPSV---------------VTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFT 397
Query: 503 YIMLFDGFDKKARTRGAKESLLRMF 527
Y + K R A + LL +
Sbjct: 398 YTSVVHNLCKDGRLVCASKLLLSCY 422
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 12/324 (3%)
Query: 52 EMNRKGLDPARESLIHLLCC--DQLQNDNAYKVLSEMVN-SGFLPSVATYNVLLHAYCRD 108
EM GL P S L+ C ++ A+K+L E ++ +G +P + TYN+LL A C+
Sbjct: 108 EMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKS 167
Query: 109 KRVDEAMGILRGMA--VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
D A+ + + + V+P ++++N +I+GLC RR+ + +++E+ G P++VTY
Sbjct: 168 GHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYT 227
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIA 225
T++ M T + + + L+ +MK++ +++ L+ T ++AY+ E++
Sbjct: 228 TML-KMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 226 SGFEPS-LVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
SG +V+YN L++ Y + + + +GL PD ++ G
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTG 346
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
A + A + E G+ P+ T + LID LC + A LF M E+ Y ++V
Sbjct: 347 GAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM----EVRDEFTYTSVV 402
Query: 345 GAYCLVGEFSKAFHLRDEMIHKGF 368
C G A L +KG
Sbjct: 403 HNLCKDGRLVCASKLLLSCYNKGM 426
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 154/371 (41%), Gaps = 43/371 (11%)
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
G+ PD + NTLI + ++ +++A+ + M E GI P+ TY+ LI L+
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 322 FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
LF EML GLSP ++Y L+ Y +G +AF + E IH + P +
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIH-------LAGLVPGID 155
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
TYN L+ C G + A+ + + + + P+ ++YNI+I+G CK +G +M E+
Sbjct: 156 TYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 442 DEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASV 501
++G + V Y +++ Y + K L L +M+ G
Sbjct: 215 KKSGYT---------------PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGF 259
Query: 502 LYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE-NCSNNEFKSVVELAKG 560
+ K R A E + + S +Y+TL+ + +V +L +
Sbjct: 260 ANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEE 319
Query: 561 FGMRGLKNE-------------------AASVLNTVLQWNYKPDGAVYNFLIVEHCRRRN 601
M+GLK + A L + + +P N LI C+ +
Sbjct: 320 IEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGH 379
Query: 602 VDKAYNMYMEM 612
VD+A ++ M
Sbjct: 380 VDRAMRLFASM 390
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 108/296 (36%), Gaps = 80/296 (27%)
Query: 344 VGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGIL 403
V + C +A L + I G LPD ++TYN LI G ++EA +
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPD--------VITYNTLIKGYTRFIGIDEAYAVT 71
Query: 404 RGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS 463
R M E + PD +YN +ISG K L + +L EM L GLS
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM----------------LHSGLS 115
Query: 464 -DEVNYNSVINAYCAEGEVSKAL-ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKE 521
D +YN++++ Y G +A ILH+++ G L G D
Sbjct: 116 PDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAG----------LVPGID---------- 155
Query: 522 SLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQW 580
TY+ L++ C + + +EL K R
Sbjct: 156 ----------------TYNILLDALCKSGHTDNAIELFKHLKSR---------------- 183
Query: 581 NYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
KP+ YN LI C+ R V M E+ G+ + + ++K F R
Sbjct: 184 -VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKR 238
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 215/460 (46%), Gaps = 42/460 (9%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A ++ +M+ + PS +TYN L++A EA+ + + M V P++V+ N V+
Sbjct: 197 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 256
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
+ R+ +A + M + PD+ T+N +I +SK +A+ L++ M+++R
Sbjct: 257 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK-LGQSSQALDLFNSMREKRAE 315
Query: 196 V--PWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
T+TS++HL ++ VF M+A G +P++V+YN L+ AY A+
Sbjct: 316 CRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 375
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ + G+ PD V L+ + + + KA E+ M + PN TY+ LID
Sbjct: 376 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
L+EA ++FR+M G+ P N+V L+ S++ K D
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGIKP------NVVSVCTLLAACSRS--------KKKVNVDT 481
Query: 373 VTEFSPS------LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
V + S YN+ I +E+A+ + + M + + D V++ I+ISG C
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 427 KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALI 486
++ + +A + EM+ DL++ L+ EV Y+SV+ AY +G+V++A
Sbjct: 542 RMSKYPEAISYLKEME--------DLSI------PLTKEV-YSSVLCAYSKQGQVTEAES 586
Query: 487 LHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
+ ++M+ G + Y + ++ + A E L M
Sbjct: 587 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 139/602 (23%), Positives = 254/602 (42%), Gaps = 63/602 (10%)
Query: 72 DQLQNDNAYKVLSEMVNSGFLPSVATYN--VLLHAYCRDKRVDEAMGILRGMAVEPNVVS 129
D+L N ++ + ++NS ++ A N VL+ R ++ + + + M ++ N +
Sbjct: 83 DRLMALNRWEEVDGVLNS-WVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCA 141
Query: 130 ----FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
+N +I + +A L EM PD+ TY+ LI A + A+ L
Sbjct: 142 RNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRW-AMNL 200
Query: 186 YDQMKQQRIPVPWTTYTSLIHLL-CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
D M + I +TY +LI+ + N +A +V +M +G P LVT+N ++ AY
Sbjct: 201 MDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKS 260
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI--LPNA 302
+ A+ F M + PD N +I K G+ +A ++ M E+ P+
Sbjct: 261 GRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 320
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
T++ ++ + + +F M+ GL P +Y L+GAY + G A + +
Sbjct: 321 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 380
Query: 363 MIHKGFLPDFVTEFSPSLVTYNALI--YGNCLL-GRVEEALGILRGMAEMSLSPDDVSYN 419
+ G +PD +V+Y L+ YG G+ +E ++R + P+ V+YN
Sbjct: 381 IKQNGIIPD--------VVSYTCLLNSYGRSRQPGKAKEVFLMMR---KERRKPNVVTYN 429
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIR--------------------GVDLAVFSSLM 459
+I + G L +A E+ +M E GI+ VD + ++
Sbjct: 430 ALIDAYGSNGFLAEAVEIFRQM-EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 460 KGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRG 518
+G++ + YNS I +Y E+ KA+ L+ M SV + +L G + ++
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 519 AKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVL 578
A S L+ DL L Y +++ C+ + +G EA S+ N +
Sbjct: 549 AI-SYLKEMEDLSIPLTKEVYSSVL--CA-------------YSKQGQVTEAESIFNQMK 592
Query: 579 QWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHN 638
+PD Y ++ + KA +++EM G + AL++A G+ +
Sbjct: 593 MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 652
Query: 639 EV 640
V
Sbjct: 653 NV 654
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 170/424 (40%), Gaps = 93/424 (21%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDK---RVDEAMGILRGMAVEPNVVSFNTVID 135
A VL ++ +G +P V +Y LL++Y R + + E ++R +PNVV++N +ID
Sbjct: 374 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALID 433
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK-----NTNLVI---------- 180
+ + EA E+ ++M G+ P+ V+ TL+ A S+ N + V+
Sbjct: 434 AYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINL 493
Query: 181 -------------------RAIALYDQMKQQRIPVPWTTYTSLIH--------------- 206
+AIALY M+++++ T+T LI
Sbjct: 494 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 553
Query: 207 -----------------LLCTYN----VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
+LC Y+ V +A +F +M +G EP ++ Y ++HAY
Sbjct: 554 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 613
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
++ A +F M G+ PD++ C+ L+ F K G+ F + M E+ I +
Sbjct: 614 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVF 673
Query: 306 SKLIDCLCPQRRLSEAFDLFREM------LGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
++ + A DL + M L GL+ + F G
Sbjct: 674 FEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSG-------------- 719
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+ E + K F + +L TY L+ +G + + +L M+ + P + Y
Sbjct: 720 KVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYR 779
Query: 420 IVIS 423
+IS
Sbjct: 780 DIIS 783
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 220/510 (43%), Gaps = 56/510 (10%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
S + V+D L A R +E + +L + + + LI +S+ + + + ++
Sbjct: 77 SVSEVVDRLMALNRWEEVDGVLNSWVGRFARKN---FPVLIRELSRRGCIEL-CVNVFKW 132
Query: 189 MK-QQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
MK Q+ Y +I L +N VD+A +F EM +P TY+ LI+A+
Sbjct: 133 MKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 192
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ + AM + M + P N LI G +A E+ +M + G+ P+ T++
Sbjct: 193 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 252
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL--VGEFSKAFHLRDEMI 364
++ R+ S+A F M G + P + FN++ YCL +G+ S+A L + M
Sbjct: 253 IVLSAYKSGRQYSKALSYFELMKGAKVRP-DTTTFNII-IYCLSKLGQSSQALDLFNSMR 310
Query: 365 HKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
K E P +VT+ ++++ + G +E + M L P+ VSYN ++
Sbjct: 311 EKR------AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 364
Query: 425 FCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMK--------GLSDE----------- 465
+ G G A ++ ++ + G I D+ ++ L+ G + E
Sbjct: 365 YAVHGMSGTALSVLGDIKQNGII--PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK 422
Query: 466 ---VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKES 522
V YN++I+AY + G +++A+ + +ME G ++ +V+ + +++ + ++
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG-IKPNVVSVCTLLAACSRSKKKVNVDT 481
Query: 523 LLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNY 582
+L +L T Y++ I + + EL K A ++ ++ +
Sbjct: 482 VLSAAQSRGINLNTAAYNSAI-----GSYINAAELEK----------AIALYQSMRKKKV 526
Query: 583 KPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
K D + LI CR +A + EM
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEM 556
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 215/460 (46%), Gaps = 42/460 (9%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A ++ +M+ + PS +TYN L++A EA+ + + M V P++V+ N V+
Sbjct: 65 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 124
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
+ R+ +A + M + PD+ T+N +I +SK +A+ L++ M+++R
Sbjct: 125 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK-LGQSSQALDLFNSMREKRAE 183
Query: 196 V--PWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
T+TS++HL ++ VF M+A G +P++V+YN L+ AY A+
Sbjct: 184 CRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 243
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ + G+ PD V L+ + + + KA E+ M + PN TY+ LID
Sbjct: 244 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 303
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
L+EA ++FR+M G+ P N+V L+ S++ K D
Sbjct: 304 GSNGFLAEAVEIFRQMEQDGIKP------NVVSVCTLLAACSRS--------KKKVNVDT 349
Query: 373 VTEFSPS------LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
V + S YN+ I +E+A+ + + M + + D V++ I+ISG C
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Query: 427 KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALI 486
++ + +A + EM+ DL++ L+ EV Y+SV+ AY +G+V++A
Sbjct: 410 RMSKYPEAISYLKEME--------DLSI------PLTKEV-YSSVLCAYSKQGQVTEAES 454
Query: 487 LHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
+ ++M+ G + Y + ++ + A E L M
Sbjct: 455 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 494
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 221/525 (42%), Gaps = 56/525 (10%)
Query: 143 IKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYT 202
+ +A L EM PD+ TY+ LI A + A+ L D M + I +TY
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRW-AMNLMDDMLRAAIAPSRSTYN 85
Query: 203 SLIHLL-CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR 261
+LI+ + N +A +V +M +G P LVT+N ++ AY + A+ F M
Sbjct: 86 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 145
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER--GILPNADTYSKLIDCLCPQRRLS 319
+ PD N +I K G+ +A ++ M E+ P+ T++ ++ + +
Sbjct: 146 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
+F M+ GL P +Y L+GAY + G A + ++ G +PD
Sbjct: 206 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD-------- 257
Query: 380 LVTYNALI--YGNCLL-GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
+V+Y L+ YG G+ +E ++R + P+ V+YN +I + G L +A E
Sbjct: 258 VVSYTCLLNSYGRSRQPGKAKEVFLMMR---KERRKPNVVTYNALIDAYGSNGFLAEAVE 314
Query: 437 LMVEMDEAGGIR--------------------GVDLAVFSSLMKGLS-DEVNYNSVINAY 475
+ +M E GI+ VD + ++ +G++ + YNS I +Y
Sbjct: 315 IFRQM-EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 476 CAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP 535
E+ KA+ L+ M SV + +L G + ++ A S L+ DL L
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI-SYLKEMEDLSIPLT 432
Query: 536 TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVE 595
Y +++ C+ + +G EA S+ N + +PD Y ++
Sbjct: 433 KEVYSSVL--CA-------------YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477
Query: 596 HCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEV 640
+ KA +++EM G + AL++A G+ + V
Sbjct: 478 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 522
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 170/424 (40%), Gaps = 93/424 (21%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDK---RVDEAMGILRGMAVEPNVVSFNTVID 135
A VL ++ +G +P V +Y LL++Y R + + E ++R +PNVV++N +ID
Sbjct: 242 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALID 301
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK-----NTNLVI---------- 180
+ + EA E+ ++M G+ P+ V+ TL+ A S+ N + V+
Sbjct: 302 AYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINL 361
Query: 181 -------------------RAIALYDQMKQQRIPVPWTTYTSLIH--------------- 206
+AIALY M+++++ T+T LI
Sbjct: 362 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 421
Query: 207 -----------------LLCTYN----VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
+LC Y+ V +A +F +M +G EP ++ Y ++HAY
Sbjct: 422 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 481
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
++ A +F M G+ PD++ C+ L+ F K G+ F + M E+ I +
Sbjct: 482 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVF 541
Query: 306 SKLIDCLCPQRRLSEAFDLFREM------LGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
++ + A DL + M L GL+ + F G
Sbjct: 542 FEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSG-------------- 587
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+ E + K F + +L TY L+ +G + + +L M+ + P + Y
Sbjct: 588 KVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYR 647
Query: 420 IVIS 423
+IS
Sbjct: 648 DIIS 651
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 146/319 (45%), Gaps = 14/319 (4%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL---RG 120
S++HL + + +N V MV G P++ +YN L+ AY A+ +L +
Sbjct: 193 SIMHLYSV-KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 121 MAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
+ P+VVS+ +++ R+ +A+E+ M + P+ VTYN LI A N +
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN-GFLA 310
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCT-----YNVDKAYKVFTEMIASGFEPSLVTY 235
A+ ++ QM+Q I + +L+ C+ NVD V + + G + Y
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCTLLAA-CSRSKKKVNVDT---VLSAAQSRGINLNTAAY 366
Query: 236 NELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE 295
N I +Y ++ A+ +++ M + + D+V LI+ C+ + +A EM +
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 296 RGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSK 355
I + YS ++ Q +++EA +F +M G P AY +++ AY ++ K
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 486
Query: 356 AFHLRDEMIHKGFLPDFVT 374
A L EM G PD +
Sbjct: 487 ACELFLEMEANGIEPDSIA 505
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 190/437 (43%), Gaps = 51/437 (11%)
Query: 201 YTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
Y +I L +N VD+A +F EM +P TY+ LI+A+ + + AM + M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
+ P N LI G +A E+ +M + G+ P+ T++ ++ R+ S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCL--VGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
+A F M G + P + FN++ YCL +G+ S+A L + M K E
Sbjct: 134 KALSYFELMKGAKVRP-DTTTFNII-IYCLSKLGQSSQALDLFNSMREKR------AECR 185
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P +VT+ ++++ + G +E + M L P+ VSYN ++ + G G A +
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 438 MVEMDEAGGIRGVDLAVFSSLMK--------GLSDE--------------VNYNSVINAY 475
+ ++ + G I D+ ++ L+ G + E V YN++I+AY
Sbjct: 246 LGDIKQNGIIP--DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 303
Query: 476 CAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP 535
+ G +++A+ + +ME G ++ +V+ + +++ + +++L +L
Sbjct: 304 GSNGFLAEAVEIFRQMEQDG-IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN 362
Query: 536 TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVE 595
T Y++ I + + EL K A ++ ++ + K D + LI
Sbjct: 363 TAAYNSAI-----GSYINAAELEK----------AIALYQSMRKKKVKADSVTFTILISG 407
Query: 596 HCRRRNVDKAYNMYMEM 612
CR +A + EM
Sbjct: 408 SCRMSKYPEAISYLKEM 424
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 139/328 (42%), Gaps = 32/328 (9%)
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
I N +I ++ +++A + EM + P+A+TY LI+ + A +L +M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 329 LGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIY 388
L ++P Y NL+ A G + +A + +M G PD LVT+N ++
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD--------LVTHNIVLS 124
Query: 389 GNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIR 448
+ +AL M + PD ++NI+I KLG+ +A +L M E
Sbjct: 125 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 184
Query: 449 GVDLAVFSSLM---------------------KGLSDE-VNYNSVINAYCAEGEVSKALI 486
D+ F+S+M +GL V+YN+++ AY G AL
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 487 LHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENC 546
+ +++ +G + V Y L + + + + AKE L M + TY+ LI+
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER-RKPNVVTYNALIDAY 303
Query: 547 SNNEF-KSVVELAKGFGMRGLKNEAASV 573
+N F VE+ + G+K SV
Sbjct: 304 GSNGFLAEAVEIFRQMEQDGIKPNVVSV 331
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 144/301 (47%), Gaps = 5/301 (1%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
NA +M + GFLP+V + N + + RVD A+ R M + PN + N V+
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
G C ++ + ELLQ+M G V+YNTLI + L+ A+ L + M + +
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK-GLLSSALKLKNMMGKSGL 304
Query: 195 PVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
T+ +LIH C + +A KVF EM A P+ VTYN LI+ Y + + A
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
+ M G+ D + N LI CK + KA + E+ + ++PN+ T+S LI C
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
++ F+L++ M+ G P E + LV A+C +F A + EM+ + D
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Query: 374 T 374
T
Sbjct: 485 T 485
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 164/370 (44%), Gaps = 31/370 (8%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNV---------------------VSFNT 132
S+ T+ ++LH ++++ A ILR + V V F++
Sbjct: 114 SLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDS 173
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+ ++ + A + +M G P + N ++++ + I A+ Y +M++
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI-ALRFYREMRRC 232
Query: 193 RI-PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+I P P+T + + +DK ++ +M GF + V+YN LI +C + + A
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ + M GL P+ V NTLI FC+ +L++A ++ EM + PN TY+ LI+
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
Q AF + +M+ G+ Y L+ C + KA E+ + +P+
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
T++ALI G C+ + + + M P++ ++N+++S FC+ +
Sbjct: 413 --------SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 432 GKAFELMVEM 441
A +++ EM
Sbjct: 465 DGASQVLREM 474
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 7/285 (2%)
Query: 52 EMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
EM R + P +L ++ C + D ++L +M GF + +YN L+ +C
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 110 RVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
+ A+ + M ++PNVV+FNT+I G C +++EA ++ EM + +AP++VTYN
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIA 225
TLI S+ + + A Y+ M I TY +LI LC KA + E+
Sbjct: 348 TLINGYSQQGDHEM-AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
P+ T++ LI C R +++ M G P+ N L++ FC+ + +
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
A ++ EMV R I ++ T ++ + L Q + L +EM G
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEG 511
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 164/377 (43%), Gaps = 39/377 (10%)
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
+ ++L F + A + +M + G LP ++ + + L Q R+ A +REM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 329 LGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIY 388
+SP Y ++ YC G+ K L +M GF + V+YN LI
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF--------RATDVSYNTLIA 281
Query: 389 GNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIR 448
G+C G + AL + M + L P+ V++N +I GFC+ +L +A ++ EM +
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM------K 335
Query: 449 GVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFD 508
V++A + V YN++IN Y +G+ A +++M +G R + Y L
Sbjct: 336 AVNVA---------PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 509 GFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKN 568
G K+A+TR A + + + + L+ N S + L G +R +
Sbjct: 387 GLCKQAKTRKAAQFVKEL-----------DKENLVPNSS-----TFSALIMGQCVRKNAD 430
Query: 569 EAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALI 628
+ ++++ P+ +N L+ CR + D A + EMV +V +
Sbjct: 431 RGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Query: 629 KALFHVGRHNEVRRVIQ 645
L H G+ V++++Q
Sbjct: 491 NGLKHQGKDQLVKKLLQ 507
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 11/244 (4%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVAT 97
SG L K + +M R G S L+ C++ +A K+ + M SG P+V T
Sbjct: 251 SGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVT 310
Query: 98 YNVLLHAYCRDKRVDEA---MGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
+N L+H +CR ++ EA G ++ + V PN V++NT+I+G + + A ++M
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NV 213
G+ D +TYN LI + K +A ++ ++ + +T+++LI C N
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAK-TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA----VI 269
D+ ++++ MI SG P+ T+N L+ A+C + A + R M R + D+ +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 270 CNTL 273
CN L
Sbjct: 490 CNGL 493
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 58/311 (18%)
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
A F +M GF P++ + N + + + RV A+ +R M ++P+ N +++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 276 FFCKYGELEKAFEMRAEM-------------------VERGIL----------------P 300
+C+ G+L+K E+ +M E+G+L P
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
N T++ LI C +L EA +F EM ++P Y L+ Y G+ AF
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 366
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
++M+ G D ++TYNALI+G C + +A ++ + + +L P+ +++
Sbjct: 367 EDMVCNGIQRD--------ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGE 480
+I G C + FEL M +G +E +N +++A+C +
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSG---------------CHPNEQTFNMLVSAFCRNED 463
Query: 481 VSKALILHDEM 491
A + EM
Sbjct: 464 FDGASQVLREM 474
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 144/301 (47%), Gaps = 5/301 (1%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
NA +M + GFLP+V + N + + RVD A+ R M + PN + N V+
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
G C ++ + ELLQ+M G V+YNTLI + L+ A+ L + M + +
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK-GLLSSALKLKNMMGKSGL 304
Query: 195 PVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
T+ +LIH C + +A KVF EM A P+ VTYN LI+ Y + + A
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
+ M G+ D + N LI CK + KA + E+ + ++PN+ T+S LI C
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
++ F+L++ M+ G P E + LV A+C +F A + EM+ + D
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Query: 374 T 374
T
Sbjct: 485 T 485
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 164/370 (44%), Gaps = 31/370 (8%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNV---------------------VSFNT 132
S+ T+ ++LH ++++ A ILR + V V F++
Sbjct: 114 SLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDS 173
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+ ++ + A + +M G P + N ++++ + I A+ Y +M++
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI-ALRFYREMRRC 232
Query: 193 RI-PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+I P P+T + + +DK ++ +M GF + V+YN LI +C + + A
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ + M GL P+ V NTLI FC+ +L++A ++ EM + PN TY+ LI+
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
Q AF + +M+ G+ Y L+ C + KA E+ + +P+
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
T++ALI G C+ + + + M P++ ++N+++S FC+ +
Sbjct: 413 --------SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 432 GKAFELMVEM 441
A +++ EM
Sbjct: 465 DGASQVLREM 474
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 7/285 (2%)
Query: 52 EMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
EM R + P +L ++ C + D ++L +M GF + +YN L+ +C
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 110 RVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
+ A+ + M ++PNVV+FNT+I G C +++EA ++ EM + +AP++VTYN
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIA 225
TLI S+ + + A Y+ M I TY +LI LC KA + E+
Sbjct: 348 TLINGYSQQGDHEM-AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
P+ T++ LI C R +++ M G P+ N L++ FC+ + +
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
A ++ EMV R I ++ T ++ + L Q + L +EM G
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEG 511
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 164/377 (43%), Gaps = 39/377 (10%)
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
+ ++L F + A + +M + G LP ++ + + L Q R+ A +REM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 329 LGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIY 388
+SP Y ++ YC G+ K L +M GF + V+YN LI
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF--------RATDVSYNTLIA 281
Query: 389 GNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIR 448
G+C G + AL + M + L P+ V++N +I GFC+ +L +A ++ EM +
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM------K 335
Query: 449 GVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFD 508
V++A + V YN++IN Y +G+ A +++M +G R + Y L
Sbjct: 336 AVNVA---------PNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 509 GFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKN 568
G K+A+TR A + + + + L+ N S + L G +R +
Sbjct: 387 GLCKQAKTRKAAQFVKEL-----------DKENLVPNSS-----TFSALIMGQCVRKNAD 430
Query: 569 EAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALI 628
+ ++++ P+ +N L+ CR + D A + EMV +V +
Sbjct: 431 RGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Query: 629 KALFHVGRHNEVRRVIQ 645
L H G+ V++++Q
Sbjct: 491 NGLKHQGKDQLVKKLLQ 507
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 11/244 (4%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVAT 97
SG L K + +M R G S L+ C++ +A K+ + M SG P+V T
Sbjct: 251 SGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVT 310
Query: 98 YNVLLHAYCRDKRVDEA---MGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
+N L+H +CR ++ EA G ++ + V PN V++NT+I+G + + A ++M
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NV 213
G+ D +TYN LI + K +A ++ ++ + +T+++LI C N
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAK-TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA----VI 269
D+ ++++ MI SG P+ T+N L+ A+C + A + R M R + D+ +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 270 CNTL 273
CN L
Sbjct: 490 CNGL 493
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 58/311 (18%)
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
A F +M GF P++ + N + + + RV A+ +R M ++P+ N +++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 276 FFCKYGELEKAFEMRAEM-------------------VERGIL----------------P 300
+C+ G+L+K E+ +M E+G+L P
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
N T++ LI C +L EA +F EM ++P Y L+ Y G+ AF
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 366
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
++M+ G D ++TYNALI+G C + +A ++ + + +L P+ +++
Sbjct: 367 EDMVCNGIQRD--------ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGE 480
+I G C + FEL M +G +E +N +++A+C +
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSG---------------CHPNEQTFNMLVSAFCRNED 463
Query: 481 VSKALILHDEM 491
A + EM
Sbjct: 464 FDGASQVLREM 474
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 195/474 (41%), Gaps = 63/474 (13%)
Query: 52 EMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
EM KG+ P + L+ CC Q + +A+ ++ EM +G P + YNVL +
Sbjct: 421 EMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNG 480
Query: 110 RVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
EA L+ M V+P V+ N VI+GL + +AE + + K D+
Sbjct: 481 LAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVK 540
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN--VDKAYKVFTEMI 224
A + +++ + P+P + Y +L LC + KA + M
Sbjct: 541 GFCAAGCLDHA--------FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMW 592
Query: 225 ASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
G EP Y +LI A+C + V+ A F + + + PD +I +C+ E +
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
+A+ + +M R + P+ TYS L++ D+ REM + P Y ++
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMI 705
Query: 345 GAYCLVGEFSKAFHLRDEMIHKGFLPDFVT--------------------EFSPSLVTYN 384
YC + + K + L +M + +PD VT + P + Y
Sbjct: 706 NRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYT 765
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA---FELMVEM 441
LI C +G + EA I M E + PD Y +I+ CK+G L +A F+ M+E
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIE- 824
Query: 442 DEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
G++ D V Y ++I C G V KA+ L EM G
Sbjct: 825 ---SGVK--------------PDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 151/649 (23%), Positives = 269/649 (41%), Gaps = 80/649 (12%)
Query: 52 EMNRKGLDPARESLIHLLCCDQLQNDNAY---KVLSEMVNSGFLPSVATYNVLLHAYCRD 108
E+ R GLD + + L+ +ND+ K+LS ++ S Y + C +
Sbjct: 207 EIERLGLDADAHTYV-LVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLN 265
Query: 109 KRVDEAMGILRGMAVEPNV--------VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAP 160
+ D A +L+ + + N+ +++ V+ GLC + RI++AE ++ +M G+ P
Sbjct: 266 QMTDIAYFLLQPLR-DANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDP 324
Query: 161 DSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKV 219
D Y+ +I KN N + +A+ ++++M ++R + +S++ C N +AY +
Sbjct: 325 DVYVYSAIIEGHRKNMN-IPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDL 383
Query: 220 FTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCK 279
F E + V YN A +V++A+ +FR M +G+ PD + TLI C
Sbjct: 384 FKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCL 443
Query: 280 YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYA 339
G+ AF++ EM G P+ Y+ L L EAF+ + M G+ P
Sbjct: 444 QGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVT 503
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEMIHK----------GF---------LPDFVT-EFSPS 379
+ ++ GE KA + + HK GF F+ EF
Sbjct: 504 HNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLP 563
Query: 380 LVTYNALIYGNCL-LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA---F 435
Y L C + +A +L M ++ + P+ Y +I +C++ + KA F
Sbjct: 564 KSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFF 623
Query: 436 ELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
E++V K + D Y +IN YC E +A L ++M+
Sbjct: 624 EILVTK------------------KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD 665
Query: 496 SLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN--CSNNEFKS 553
V Y +L + D + + E+ +D+ +P Y T++ N C N+ K
Sbjct: 666 VKPDVVTYSVLLNS-DPELDMKREMEA-----FDV---IPDVVYYTIMINRYCHLNDLKK 716
Query: 554 VVELAKGFGMRG-----------LKNEAASVLNTVLQ-WNYKPDGAVYNFLIVEHCRRRN 601
V L K R LKN+ L+ ++ ++ KPD Y LI C+ +
Sbjct: 717 VYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGD 776
Query: 602 VDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
+ +A ++ +M+ G ALI +G E + + ++ S
Sbjct: 777 LGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES 825
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 146/605 (24%), Positives = 242/605 (40%), Gaps = 82/605 (13%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEP---NV 127
C +++ ++A V+ +M G P V Y+ ++ + ++ + +A+ + M + N
Sbjct: 302 CYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINC 361
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V ++++ C EA +L +E ++ D V YN A+ K V AI L+
Sbjct: 362 VIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGK-LGKVEEAIELFR 420
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M + I YT+LI C A+ + EM +G P +V YN L
Sbjct: 421 EMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNG 480
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA-----------FEMRAEMV- 294
Q+A + M +RG+ P V N +I GEL+KA E A MV
Sbjct: 481 LAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVK 540
Query: 295 ------------ERGI-----LPNADTYSKLIDCLCPQRR-LSEAFDLFREMLGGGLSPR 336
ER I LP + Y L LC ++ +S+A DL M G+ P
Sbjct: 541 GFCAAGCLDHAFERFIRLEFPLPKS-VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPE 599
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
+ Y L+GA+C V KA + ++ K +PD L TY +I C L
Sbjct: 600 KSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD--------LFTYTIMINTYCRLNEP 651
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFS 456
++A + M + PD V+Y+++++ E+D + D+
Sbjct: 652 KQAYALFEDMKRRDVKPDVVTYSVLLNS-------------DPELDMKREMEAFDV---- 694
Query: 457 SLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKART 516
+ D V Y +IN YC ++ K L +M+ + V Y +L ++ +
Sbjct: 695 -----IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLS 749
Query: 517 RGAKESLLR--MFY------------DLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFG 562
R K ++ +FY DL + F D +IE+ + + L
Sbjct: 750 REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIF--DQMIESGVDPDAAPYTALIACCC 807
Query: 563 MRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMF 622
G EA + + +++ KPD Y LI CR V KA + EM+ G
Sbjct: 808 KMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKA 867
Query: 623 SVLAL 627
S+ A+
Sbjct: 868 SLSAV 872
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 146/327 (44%), Gaps = 22/327 (6%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA---MGILRG 120
+L LC ++ A +L M G P + Y L+ A+CR V +A IL
Sbjct: 569 TLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVT 628
Query: 121 MAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
+ P++ ++ +I+ C K+A L ++M + + PD VTY+ L+ + +
Sbjct: 629 KKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE------ 682
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELI 239
+ + +M+ + YT +I+ C N + K Y +F +M P +VTY L+
Sbjct: 683 --LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL 740
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL 299
R+ + R M + PD LI + CK G+L +A + +M+E G+
Sbjct: 741 KNKPERN-------LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVD 793
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P+A Y+ LI C C L EA +F M+ G+ P Y L+ C G KA L
Sbjct: 794 PDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKL 853
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNAL 386
EM+ KG P T+ S S V Y L
Sbjct: 854 VKEMLEKGIKP---TKASLSAVHYAKL 877
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 160/460 (34%), Gaps = 67/460 (14%)
Query: 200 TYTSLIHLLCTYNVDKAYKVFT-EMIASG-----------------FEPSLV----TYNE 237
Y ++I ++C + +DK F E++ G E SLV
Sbjct: 92 AYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTA 151
Query: 238 LIHAYCCRDRVQDAMGIF-RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER 296
L+ AY D +A+ IF R G PD N LI+ G + E+
Sbjct: 152 LVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERL 211
Query: 297 GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
G+ +A TY ++ L E L +L Y N + CL A
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIA 271
Query: 357 FHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
+ L + L D S + Y ++ G C R+E+A ++ M + + PD
Sbjct: 272 YFLLQPLRDANILVD----KSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVY 327
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS--DEVNYNSVINA 474
Y+ +I G K + KA + VF+ ++K + V +S++
Sbjct: 328 VYSAIIEGHRKNMNIPKAVD-----------------VFNKMLKKRKRINCVIVSSILQC 370
Query: 475 YCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSL 534
YC G S+A L E V Y + FD K + A E L R +
Sbjct: 371 YCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIE-LFREMTGKGIAP 429
Query: 535 PTFTYDTLIENC-----SNNEFKSVVE---------------LAKGFGMRGLKNEAASVL 574
Y TLI C ++ F ++E LA G GL EA L
Sbjct: 430 DVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETL 489
Query: 575 NTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
+ KP +N +I +DKA Y + H
Sbjct: 490 KMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEH 529
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 182/408 (44%), Gaps = 60/408 (14%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA-----VEP 125
C D A+++ +M P V TYN ++ CR +V A +L GM V P
Sbjct: 220 CKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHP 279
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
NVVS+ T++ G C K+ I EA + +M S+GL P++VTYNTLI +S+
Sbjct: 280 NVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR-------- 331
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
YD++K I FT F P T+N LI A+C
Sbjct: 332 YDEIKDILI--------------------GGNDAFT-----TFAPDACTFNILIKAHCDA 366
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL------ 299
+ AM +F+ M + L PD+ + LI C E ++A + E+ E+ +L
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 300 -PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
P A Y+ + + LC + +A +FR+++ G+ +Y L+ +C G+F A+
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP-SYKTLITGHCREGKFKPAYE 485
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
L M+ + F+PD L TY LI G +G A L+ M S P ++
Sbjct: 486 LLVLMLRREFVPD--------LETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTF 537
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA------VFSSLMK 460
+ V++ K ++F L+ M E + +DL+ +FSS K
Sbjct: 538 HSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQK 585
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 242/579 (41%), Gaps = 60/579 (10%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL----RGMAVEPNVVSFNTVIDG 136
K+ M G PSV T+N LL + R A + R V P+ +FNT+I+G
Sbjct: 159 KLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLING 218
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
C + EA + ++M PD VTYNT+I + + + I L +K+
Sbjct: 219 FCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVH 278
Query: 197 P-WTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
P +YT+L+ C +D+A VF +M++ G +P+ VTYN LI R + I
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI 338
Query: 255 FRGMPDRGLT--PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
G D T PDA N LI C G L+ A ++ EM+ + P++ +YS LI L
Sbjct: 339 LIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 313 CPQRRLSEAFDLFREMLGGGL-------SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
C + A LF E+ + P AY + C G+ +A + +++
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
+G + PS Y LI G+C G+ + A +L M PD +Y ++I G
Sbjct: 459 RG------VQDPPS---YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509
Query: 426 CKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKAL 485
K+GE A + + M +R L V ++ L++ ++C L
Sbjct: 510 LKIGEALLAHDTLQRM-----LRSSYLPVATTFHSVLAELAKRKFANESFCL-----VTL 559
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN 545
+L + + L V+ ++ +KA ++R+ YD
Sbjct: 560 MLEKRIRQNIDLSTQVVRLLFSSAQKEKAFL------IVRLLYD---------------- 597
Query: 546 CSNNEFKSVVELAKGFGMRGLK-NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDK 604
N + +E G+ K +A +++ L+ + D N +I C+ + +
Sbjct: 598 ---NGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSE 654
Query: 605 AYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRV 643
A+++Y E+V G + + L AL G+ E++ V
Sbjct: 655 AFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFV 693
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 200/449 (44%), Gaps = 61/449 (13%)
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEM 223
+N+LI + N L ++ L+ MKQ I T+ SL+ +L A+ +F EM
Sbjct: 141 FNSLIRSYG-NAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM 199
Query: 224 IAS-GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
+ G P T+N LI+ +C V +A IF+ M PD V NT+I C+ G+
Sbjct: 200 RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
Query: 283 LEKAFEMRAEMVERG--ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
++ A + + M+++ + PN +Y+ L+ C ++ + EA +F +ML GL P Y
Sbjct: 260 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 341 FNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEAL 400
L+ + E + ++D +I D T F+P T+N LI +C G ++ A+
Sbjct: 320 NTLIKG---LSEAHRYDEIKDILIGGN---DAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 401 GILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD----LA--- 453
+ + M M L PD SY+++I C E +A L E+ E + G D LA
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 454 ------------------VFSSLMK-GLSDEVNYNSVINAYCAEGEVSKA---LILHDEM 491
VF LMK G+ D +Y ++I +C EG+ A L+L
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRR 493
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEF 551
E L Y +L DG K A ++L RM + LP T F
Sbjct: 494 EFVPDLET---YELLIDGLLKIGEALLAHDTLQRMLRS--SYLPVAT-----------TF 537
Query: 552 KSVV-ELAKGFGMRGLKNEAASVLNTVLQ 579
SV+ ELAK R NE+ ++ +L+
Sbjct: 538 HSVLAELAK----RKFANESFCLVTLMLE 562
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 180/443 (40%), Gaps = 75/443 (16%)
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR-GLTPDAVICNT 272
++ K+F M G PS++T+N L+ R R A +F M G+TPD+ NT
Sbjct: 155 QESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNT 214
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML--G 330
LI FCK +++AF + +M P+ TY+ +ID LC ++ A ++ ML
Sbjct: 215 LINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA 274
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
+ P +Y LV YC+ E +A + +M+ +G P+ VTYN LI G
Sbjct: 275 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGL--------KPNAVTYNTLIKGL 326
Query: 391 CLLGRVEEALGILRGM--AEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIR 448
R +E IL G A + +PD ++NI+I C G L A ++ EM
Sbjct: 327 SEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLN----- 381
Query: 449 GVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFD 508
MK D +Y+ +I C E +A L +E LF+
Sbjct: 382 ----------MKLHPDSASYSVLIRTLCMRNEFDRAETLFNE---------------LFE 416
Query: 509 GFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLK 567
KE LL D C L Y+ + E C+N + K ++ + RG++
Sbjct: 417 -----------KEVLLGK--DECKPLAA-AYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ 462
Query: 568 NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLAL 627
D Y LI HCR AY + + M+ F + + L
Sbjct: 463 -----------------DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELL 505
Query: 628 IKALFHVGRHNEVRRVIQNVLRS 650
I L +G +Q +LRS
Sbjct: 506 IDGLLKIGEALLAHDTLQRMLRS 528
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 220/510 (43%), Gaps = 67/510 (13%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A +V+ MV+SG +P + Y L++ C+ V AM ++ M N V++N ++
Sbjct: 125 AIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVR 184
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
GLC + ++ + ++ + KGLAP++ TY+ L+ A K
Sbjct: 185 GLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKER------------------- 225
Query: 196 VPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
D+A K+ E+I G EP+LV+YN L+ +C R DAM +F
Sbjct: 226 ----------------GTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALF 269
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
R +P +G + V N L+ C G E+A + AEM P+ TY+ LI+ L
Sbjct: 270 RELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFH 329
Query: 316 RRLSEAFDLFREMLGGGLSPREYA--YFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
R +A + +EM G R A Y ++ C G+ DEMI++
Sbjct: 330 GRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYR------- 382
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
P+ TYNA+ +V+EA I++ ++ Y VI+ C+ G
Sbjct: 383 -RCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFA 441
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
AF+L+ EM G D +S+L++GL C EG + A+ + ME
Sbjct: 442 AFQLLYEMTRCG--FDPDAHTYSALIRGL-------------CLEGMFTGAMEVLSIMEE 486
Query: 494 HGSLRASVL-YIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSN-NEF 551
+ + +V + + G K RT A E + M + TY L+E ++ +E
Sbjct: 487 SENCKPTVDNFNAMILGLCKIRRTDLAME-VFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 552 KSVVELAKGFGMRGLKNEAASVLNTVLQWN 581
+ E+ +R + + A V V+Q+N
Sbjct: 546 ELAKEVLDELRLRKVIGQNA-VDRIVMQFN 574
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 183/409 (44%), Gaps = 51/409 (12%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATY 98
G L ++ V + +KGL P + LL + D A K+L E++ G P++ +Y
Sbjct: 190 GSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSY 249
Query: 99 NVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
NVLL +C++ R D+AM + R + + NVVS+N ++ LC R +EA LL EM+
Sbjct: 250 NVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG 309
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ--QRIPVPWTTYTSLIHLLCTY-N 212
AP VTYN LI +++ + +A+ + +M + + V T+Y +I LC
Sbjct: 310 GDRAPSVVTYNILINSLAFHGR-TEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGK 368
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
VD K EMI +P+ TYN + +VQ+A I + + ++ +
Sbjct: 369 VDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKS 428
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
+IT C+ G AF++ EM G P+A TYS LI L
Sbjct: 429 VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGL-------------------- 468
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
CL G F+ A + M + P++ +NA+I G C
Sbjct: 469 ---------------CLEGMFTGAMEVLSIM-------EESENCKPTVDNFNAMILGLCK 506
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
+ R + A+ + M E P++ +Y I++ G EL A E++ E+
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 190/456 (41%), Gaps = 48/456 (10%)
Query: 202 TSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
T L++ LC N + KA +V M++SG P Y L++ C R V AM + M D
Sbjct: 110 TQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMED 169
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
G + V N L+ C G L ++ + ++++G+ PNA TYS L++ +R E
Sbjct: 170 HGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDE 229
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A L E++ G P +Y L+ +C G A L E+ KG F ++
Sbjct: 230 AVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG--------FKANV 281
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
V+YN L+ C GR EEA +L M +P V+YNI+I+ G +A +++ E
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE 341
Query: 441 MDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH------- 493
M + V +YN VI C EG+V + DEM +
Sbjct: 342 MSKGNHQFRV-------------TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNE 388
Query: 494 -----------HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTL 542
H S YI+ +K T +S++ LC TF L
Sbjct: 389 GTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVIT---SLCRKGNTFAAFQL 445
Query: 543 IENCSNNEFK----SVVELAKGFGMRGLKNEAASVLNTVLQW-NYKPDGAVYNFLIVEHC 597
+ + F + L +G + G+ A VL+ + + N KP +N +I+ C
Sbjct: 446 LYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLC 505
Query: 598 RRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFH 633
+ R D A ++ MV + + L++ + H
Sbjct: 506 KIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAH 541
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 161/413 (38%), Gaps = 60/413 (14%)
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
+ D+ + G P+ L+ CK L+KA + MV GI+P+A Y+
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
L++ LC + + A L +M G Y LV C++G +++ + ++ KG
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 368 FLPD-FVTEF--------------------------SPSLVTYNALIYGNCLLGRVEEAL 400
P+ F F P+LV+YN L+ G C GR ++A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 401 GILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMK 460
+ R + + VSYNI++ C G +A L+ EMD GG R +
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD--GGDRAPSV-------- 316
Query: 461 GLSDEVNYNSVINAYCAEGEVSKALILHDEME--HHGSLRASVLYIMLFDGFDKKARTRG 518
V YN +IN+ G +AL + EM +H + Y + K+ +
Sbjct: 317 -----VTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDL 371
Query: 519 AKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVL 578
+ L M Y C TY+ + C +N S V+ EA ++ ++
Sbjct: 372 VVKCLDEMIYRRCKP-NEGTYNAIGSLCEHN---SKVQ------------EAFYIIQSLS 415
Query: 579 QWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKAL 631
Y +I CR+ N A+ + EM GF + ALI+ L
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGL 468
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 206/450 (45%), Gaps = 34/450 (7%)
Query: 68 LLCCDQLQNDNAYKVLSEMVNSG-FLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---V 123
L+ + Q++ ++V +EM N G P TY+ L+ +Y + R D A+ + M +
Sbjct: 205 LMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCM 264
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
+P + T++ ++++A +L +EM G +P TY LI + K V A
Sbjct: 265 QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGK-AGRVDEAY 323
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHA- 241
Y M + + +L+++L V++ VF+EM P++V+YN +I A
Sbjct: 324 GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL 383
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
+ + V + F M ++P + LI +CK +EKA + EM E+G P
Sbjct: 384 FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPC 443
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLG--GGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
Y LI+ L +R A +LF+E+ G +S R YA ++ + G+ S+A L
Sbjct: 444 PAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV--MIKHFGKCGKLSEAVDL 501
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+EM ++G PD + YNAL+ G G + EA +LR M E D S+N
Sbjct: 502 FNEMKNQGSGPD--------VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHN 553
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEG 479
I+++GF + G +A E M E + GI+ D V YN+++ + G
Sbjct: 554 IILNGFARTGVPRRAIE-MFETIKHSGIK--------------PDGVTYNTLLGCFAHAG 598
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDG 509
+A + EM+ G ++ Y + D
Sbjct: 599 MFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 217/500 (43%), Gaps = 58/500 (11%)
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIAS 226
L+ A+ + +V +A++++ Q K ++ +TY S+I +L +K ++V+TEM
Sbjct: 168 LVKALGR-AKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNE 226
Query: 227 G--FEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
G F P +TY+ LI +Y R A+ +F M D + P I TL+ + K G++E
Sbjct: 227 GDCF-PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
KA ++ EM G P TY++LI L R+ EA+ +++ML GL+P NL+
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 345 GAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL---GRVEEALG 401
VG + ++ EM + +P++V+YN +I L V E
Sbjct: 346 NILGKVGRVEELTNVFSEM--------GMWRCTPTVVSYNTVI--KALFESKAHVSEVSS 395
Query: 402 ILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG 461
M S+SP + +Y+I+I G+CK + KA L+ EMDE G A + SL+
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP--AAYCSLINA 453
Query: 462 LSDEVNYNS----------------------VINAYCAEGEVSKALILHDEMEHHGSLRA 499
L Y + +I + G++S+A+ L +EM++ GS
Sbjct: 454 LGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 500 SVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAK 559
Y L G K A SLLR + EN + S +
Sbjct: 514 VYAYNALMSGMVKAGMINEAN-SLLR---------------KMEENGCRADINSHNIILN 557
Query: 560 GFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFAS 619
GF G+ A + T+ KPDG YN L+ ++A M EM GF
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEY 617
Query: 620 HMFSVLALIKALFHVGRHNE 639
+ +++ A+ +V +
Sbjct: 618 DAITYSSILDAVGNVDHEKD 637
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 202/506 (39%), Gaps = 63/506 (12%)
Query: 199 TTYTSLIHLLCTYNV-DKAYKVFTEMIASGF-EPSLVTYNELIHAYCCRDRVQDAMGIFR 256
+TY +LI L + + Y+ E++ + + S +EL+ A V A+ +F
Sbjct: 127 STYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFY 186
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG-ILPNADTYSKLIDCLCPQ 315
R P + N++I + G+ EK E+ EM G P+ TYS LI
Sbjct: 187 QAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 246
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE 375
R A LF EM + P E Y L+G Y VG+ KA L +EM G
Sbjct: 247 GRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGC------- 299
Query: 376 FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF 435
SP++ TY LI G GRV+EA G + M L+PD V N +++ LG++G+
Sbjct: 300 -SPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN---ILGKVGRVE 355
Query: 436 ELMVEMDEAGGIRGVDLAV-FSSLMKGL-----------------------SDEVNYNSV 471
EL E G R V +++++K L E Y+ +
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 472 INAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLC 531
I+ YC V KAL+L +EM+ G Y L + K R A E L + +
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANE-LFKELKENF 474
Query: 532 TSLPTFTYDTLIEN---CSN--------NEFK---------SVVELAKGFGMRGLKNEAA 571
++ + Y +I++ C NE K + L G G+ NEA
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 572 SVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKAL 631
S+L + + + D +N ++ R +A M+ + H G + L+
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCF 594
Query: 632 FHVGRHNEVRRVIQNVLRSCNINGFE 657
H G E R ++R GFE
Sbjct: 595 AHAGMFEEAAR----MMREMKDKGFE 616
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 13/215 (6%)
Query: 50 VSEMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMV-----NSGFLPSVATYNVLLHA 104
+ EM+ KG P + L+ + L Y+ +E+ N G + S Y V++
Sbjct: 432 LEEMDEKGFPPCPAAYCSLI--NALGKAKRYEAANELFKELKENFGNVSS-RVYAVMIKH 488
Query: 105 YCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPD 161
+ + ++ EA+ + M + P+V ++N ++ G+ I EA LL++M G D
Sbjct: 489 FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD 548
Query: 162 SVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV-DKAYKVF 220
++N ++ ++ T + RAI +++ +K I TY +L+ + ++A ++
Sbjct: 549 INSHNIILNGFAR-TGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 221 TEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
EM GFE +TY+ ++ A D +D + F
Sbjct: 608 REMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 186/401 (46%), Gaps = 14/401 (3%)
Query: 36 KKVTSGGLLKTTTTV-SEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFL 92
++ S ++K V EM + GL+P LL C A KV +M F
Sbjct: 175 RRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFP 233
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
P++ + LL+ +CR+ ++ EA +L M +EP++V F ++ G ++ +A +L
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
+ +M +G P+ Y LI A+ + + A+ ++ +M++ TYT+LI C
Sbjct: 294 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 210 TYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
+ +DK Y V +M G PS VTY +++ A+ +++ ++ + + M RG PD +
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
I N +I CK GE+++A + EM G+ P DT+ +I+ Q L EA + F+EM
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 329 LGGGL-SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
+ G+ S +Y L+ + L + + + ++ + I
Sbjct: 474 VSRGIFSAPQYGTLK-----SLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWI 528
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
+ G V+EA M EM L P +Y ++ G KL
Sbjct: 529 HALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKL 569
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 17/321 (5%)
Query: 149 LLQEMNSKGLAPDSVTYNTLITAMSK--NTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
L++EM P+ + + M + + N+V +A+ + D+M + + + L+
Sbjct: 153 LIEEMRKTN--PELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLD 210
Query: 207 LLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
LC +V +A KVF +M F P+L + L++ +C ++ +A + M + GL P
Sbjct: 211 ALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEP 269
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC-PQRRLSEAFDL 324
D V+ L++ + G++ A+++ +M +RG PN + Y+ LI LC ++R+ EA +
Sbjct: 270 DIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRV 329
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
F EM G Y L+ +C G K + + D+M KG + PS VTY
Sbjct: 330 FVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVM--------PSQVTYM 381
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA 444
++ + + EE L ++ M PD + YN+VI CKLGE+ +A L EM+
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 445 GGIRGVDLAVFSSLMKGLSDE 465
G GVD F ++ G + +
Sbjct: 442 GLSPGVD--TFVIMINGFTSQ 460
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 173/422 (40%), Gaps = 70/422 (16%)
Query: 269 ICNTLITFFCK-------YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
+C +++ K +G +E+ + E++E + + L+ + +A
Sbjct: 133 VCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIE------PELFVVLMRRFASANMVKKA 186
Query: 322 FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
++ EM GL P EY + L+ A C G +A + ++M K F P+L
Sbjct: 187 VEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK---------FPPNLR 237
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
+ +L+YG C G++ EA +L M E L PD V + ++SG+ G++ A++LM +M
Sbjct: 238 YFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDM 297
Query: 442 DEAGGIRGVDLAVFSSLMKGL-----------------------SDEVNYNSVINAYCAE 478
+ G V+ ++ L++ L +D V Y ++I+ +C
Sbjct: 298 RKRGFEPNVN--CYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKW 355
Query: 479 GEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFT 538
G + K + D+M G + + V Y+ + +KK + E + +M C
Sbjct: 356 GMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP-DLLI 414
Query: 539 YDTLIE-NCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHC 597
Y+ +I C E K V L GL + V V+ N G ++E C
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGL---SPGVDTFVIMIN----GFTSQGFLIEAC 467
Query: 598 RRRNVDKAYNMYMEMVHYG-FASHMFSVL-ALIKALFHVGR---HNEVRRVIQNVLRSCN 652
N + EMV G F++ + L +L+ L + +V I N SC
Sbjct: 468 ---------NHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCE 518
Query: 653 IN 654
+N
Sbjct: 519 LN 520
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/533 (23%), Positives = 231/533 (43%), Gaps = 53/533 (9%)
Query: 109 KRVDEAMGILRGMAVEPNVV----SFNTVIDGLCAKRRIKEAEELLQEM-NSKGLAPDSV 163
K A+ R + P + ++ + LC RR +LL EM +S GL PD
Sbjct: 54 KSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDA 113
Query: 164 TYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFT-E 222
+ T+I + L+ R I++ D + + I + S++ +L ++D A + FT +
Sbjct: 114 IFVTIIRGFGR-ARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRK 172
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
M+ASG + TY L+ +R+ D + + M G+ P+AV+ NTL+ CK G+
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
+ +A + +EM E PN T++ LI C +++L ++ L + G P
Sbjct: 233 VGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
++ C G S+A + + + KG D +V N L+ G C LG++ A
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVD--------VVACNTLVKGYCALGKMRVAQRF 340
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
M P+ +YN++I+G+C +G L A + +M + IR + A F++L++GL
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM-KTDAIRW-NFATFNTLIRGL 398
Query: 463 SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVL--YIMLFDGFDKKARTRGAK 520
S G L + + M+ ++ + + Y + GF K+ R A
Sbjct: 399 S-------------IGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDAL 445
Query: 521 ESLLRMFYDLCTSLP-TFTYDTLIENCSNNEFKSVVELAKG----------------FGM 563
E LL+M ++ +F +L E ++ K+ + G +
Sbjct: 446 EFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQ 505
Query: 564 RGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
G E+ ++N ++ Y P + +N +I+ C++ V +M G
Sbjct: 506 HGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERG 558
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/569 (23%), Positives = 228/569 (40%), Gaps = 137/569 (24%)
Query: 26 AAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSE 85
+A+G+LE+ T G + + +T +L H LC + + D Y++L E
Sbjct: 55 SASGALETFRWASTFPGFIHSRSTY------------RALFHKLCVFR-RFDTVYQLLDE 101
Query: 86 MVNS-GFLPSVATYNVLLHAYCRD---KRVDEAMGILRGMAVEPNVVSFNTVID------ 135
M +S G P A + ++ + R KRV + ++ ++P++ FN+++D
Sbjct: 102 MPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED 161
Query: 136 -----------------------------GLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
GL RI + +LLQ M + G+AP++V YN
Sbjct: 162 IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYN 221
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT-YNVDKAYKVFTEMIA 225
TL+ A+ KN V RA +L +MK+ T+ LI C + ++ + + +
Sbjct: 222 TLLHALCKNGK-VGRARSLMSEMKEPND----VTFNILISAYCNEQKLIQSMVLLEKCFS 276
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
GF P +VT +++ C RV +A+ + + +G D V CNTL+ +C G++
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV- 344
A EM +G LPN +TY+ LI C L A D F +M + +A FN +
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIR-WNFATFNTLI 395
Query: 345 --------------------------GAY-----CLVGEFSKAFHLRD------------ 361
GA C++ F K D
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLF 455
Query: 362 -----------EMIHKGFLPDFVTEFS--------PSLVTYNALIYGNCLLGRVEEALGI 402
+ KG + D T + PS++ + LI+ G++EE+L +
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLEL 515
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
+ M P ++N VI GFCK ++ + + +M E G +
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCV--------------- 560
Query: 463 SDEVNYNSVINAYCAEGEVSKALILHDEM 491
D +YN ++ C +G++ KA +L M
Sbjct: 561 PDTESYNPLLEELCVKGDIQKAWLLFSRM 589
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 190/424 (44%), Gaps = 48/424 (11%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGL 137
+ +K+L M SG P+ YN LLHA C++ +V A ++ M EPN V+FN +I
Sbjct: 200 DGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK-EPNDVTFNILISAY 258
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
C ++++ ++ LL++ S G PD VT ++ + N V A+ + ++++ + V
Sbjct: 259 CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLC-NEGRVSEALEVLERVESKGGKVD 317
Query: 198 WTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
+L+ C + A + F EM G+ P++ TYN LI YC + A+ F
Sbjct: 318 VVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFN 377
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNA--DTYSKLIDCLCP 314
M + + NTLI G + ++ M + + A D Y+ +I
Sbjct: 378 DMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYK 437
Query: 315 QRRLSEAFDLFREMLG------------------GGLSPREYAYFNLVG---------AY 347
+ R +A + +M GG+ + AY ++G ++
Sbjct: 438 ENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSH 497
Query: 348 CLV------GEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALG 401
CL+ G+ ++ L ++M+ +G+LP T+NA+I G C +V +
Sbjct: 498 CLIHRYSQHGKIEESLELINDMVTRGYLP--------RSSTFNAVIIGFCKQDKVMNGIK 549
Query: 402 ILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG 461
+ MAE PD SYN ++ C G++ KA+ L M E + D +++SSLM
Sbjct: 550 FVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVP--DPSMWSSLMFC 607
Query: 462 LSDE 465
LS +
Sbjct: 608 LSQK 611
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 150/340 (44%), Gaps = 40/340 (11%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEP---NV 127
C++ + + +L + + GF+P V T ++ C + RV EA+ +L + + +V
Sbjct: 259 CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V+ NT++ G CA +++ A+ EM KG P+ TYN LI + ++ A+ ++
Sbjct: 319 VACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC-DVGMLDSALDTFN 377
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASG--FEPSLVTYNELIHAYCC 244
MK I + T+ +LI L D K+ M S + YN +I+ +
Sbjct: 378 DMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYK 437
Query: 245 RDRVQDAMGIFR-----------------------GMPD----------RGLTPDAVICN 271
+R +DA+ GM D G P ++ +
Sbjct: 438 ENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSH 497
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
LI + ++G++E++ E+ +MV RG LP + T++ +I C Q ++ +M
Sbjct: 498 CLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAER 557
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
G P +Y L+ C+ G+ KA+ L M+ K +PD
Sbjct: 558 GCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPD 597
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNV 127
C++ D+ +M+ G +PS+ + L+H Y + +++E++ ++ M P
Sbjct: 469 CEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRS 528
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
+FN VI G C + ++ + +++M +G PD+ +YN L+ + + + +A L+
Sbjct: 529 STFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGD-IQKAWLLFS 587
Query: 188 QMKQQRIPVPWTTYTSLIHLL 208
+M ++ I + ++SL+ L
Sbjct: 588 RMVEKSIVPDPSMWSSLMFCL 608
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 41 GGLLKTTTTVSEMNRKGLDPA---RESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
GG+ T +M +G P+ LIH + + + +++++MV G+LP +T
Sbjct: 472 GGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYS-QHGKIEESLELINDMVTRGYLPRSST 530
Query: 98 YNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
+N ++ +C+ +V + + MA P+ S+N +++ LC K I++A L M
Sbjct: 531 FNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMV 590
Query: 155 SKGLAPDSVTYNTLITAMSKNTNL 178
K + PD +++L+ +S+ T +
Sbjct: 591 EKSIVPDPSMWSSLMFCLSQKTAI 614
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 192/425 (45%), Gaps = 30/425 (7%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
+ ++V E+++SGF SV T N LL+ + +++ + M + PN +FN +
Sbjct: 183 EEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNIL 242
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ C +E ++ L++M +G PD VTYNTL+++ + L A LY M ++R
Sbjct: 243 TNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK-EAFYLYKIMYRRR 301
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ TYTSLI LC V +A++ F M+ G +P ++YN LI+AYC +Q +
Sbjct: 302 VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 361
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M + PD C ++ F + G L A E+ + + LI L
Sbjct: 362 KLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSL 421
Query: 313 CPQRRLSEAFDLFREMLGG-GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
C + + A L ++ G + Y NL+ + +A L+ ++ ++ + D
Sbjct: 422 CQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLD 481
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
TY ALI C +GR EA ++ M + + PD ++ G+CK +
Sbjct: 482 --------AKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDF 533
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEG-EVSKALILHDE 490
KA L+ + ++ +F D +YNS++ A C G KAL L +
Sbjct: 534 DKAERLL-------SLFAMEFRIF--------DPESYNSLVKAVCETGCGYKKALELQER 578
Query: 491 MEHHG 495
M+ G
Sbjct: 579 MQRLG 583
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 169/385 (43%), Gaps = 25/385 (6%)
Query: 51 SEMNRKGLDPARES---LIHLLCCDQLQNDNAYK----VLSEMVNSGFLPSVATYNVLLH 103
S M R G+ P + L ++ C ND+ ++ L +M GF P + TYN L+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFC-----NDSNFREVDDFLEKMEEEGFEPDLVTYNTLVS 279
Query: 104 AYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAP 160
+YCR R+ EA + + M V P++V++ ++I GLC R++EA + M +G+ P
Sbjct: 280 SYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP 339
Query: 161 DSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVF 220
D ++YNTLI A K + L++ + +P +T + + + A
Sbjct: 340 DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Query: 221 TEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF-RGMPDRGLTPDAVICNTLITFFCK 279
E+ + + LI + C + A + R + + G N LI +
Sbjct: 400 VELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSR 459
Query: 280 YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYA 339
+E+A ++ ++ + + +A TY LI CLC R EA L EM + P +
Sbjct: 460 CDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFI 519
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG-RVEE 398
LV YC +F KA E + F +F F P +YN+L+ C G ++
Sbjct: 520 CGALVYGYCKELDFDKA-----ERLLSLFAMEFRI-FDPE--SYNSLVKAVCETGCGYKK 571
Query: 399 ALGILRGMAEMSLSPDDVSYNIVIS 423
AL + M + P+ ++ +I
Sbjct: 572 ALELQERMQRLGFVPNRLTCKYLIQ 596
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 148/352 (42%), Gaps = 24/352 (6%)
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
++ ++V++ M G P+ T+N L + +C ++ M + G PD V NT
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
L++ +C+ G L++AF + M R ++P+ TY+ LI LC R+ EA F M+ G
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
+ P +Y L+ AYC G ++ L EM+ +PD T ++ G
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPD--------RFTCKVIVEGFVR 388
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
GR+ A+ + + + + + +I C+ G+ A L+ + E G
Sbjct: 389 EGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHE---- 444
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
+ YN++I + + +AL+L ++++ + + Y L +
Sbjct: 445 ----------AKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCR 494
Query: 513 KARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGM 563
R R A ESL+ +D +F L+ C +F L F M
Sbjct: 495 IGRNREA-ESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAM 545
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 108/294 (36%), Gaps = 74/294 (25%)
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
LV Y +G + F + E++ GF S S+VT N L+ G L +E+ +
Sbjct: 172 LVKGYLKLGLVEEGFRVFREVLDSGF--------SVSVVTCNHLLNGLLKLDLMEDCWQV 223
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
M + + P+ ++NI+ + FC + + + +M+E G F
Sbjct: 224 YSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEG---------FEP----- 269
Query: 463 SDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKES 522
D V YN+++++YC G + +A L+ M
Sbjct: 270 -DLVTYNTLVSSYCRRGRLKEAFYLYKIMYRR---------------------------- 300
Query: 523 LLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNY 582
R+ DL TY +LI KG G EA + ++
Sbjct: 301 --RVVPDL------VTYTSLI---------------KGLCKDGRVREAHQTFHRMVDRGI 337
Query: 583 KPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
KPD YN LI +C+ + ++ + EM+ F+ +++ GR
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 169/357 (47%), Gaps = 18/357 (5%)
Query: 90 GFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
F +V +Y L+ C + E I M N V + C R ++ E+
Sbjct: 55 NFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEI 114
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
++ K YN L++++++ LV LY +M + + T+ +L++ C
Sbjct: 115 KYKLTPK-------CYNNLLSSLAR-FGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYC 166
Query: 210 TYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
V +A + T +I +G +P TY I +C R V A +F+ M G + V
Sbjct: 167 KLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEV 226
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
LI + ++++A + +M + PN TY+ LID LC + SEA +LF++M
Sbjct: 227 SYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM 286
Query: 329 LGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIY 388
G+ P + Y L+ ++C +A L + M+ G +P+ ++TYNALI
Sbjct: 287 SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPN--------VITYNALIK 338
Query: 389 GNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
G C V +A+G+L M E +L PD ++YN +I+G C G L A+ L+ M+E+G
Sbjct: 339 GFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESG 394
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 6/230 (2%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVID 135
A + ++ ++ +G P TY + +CR K VD A + + M N VS+ +I
Sbjct: 174 AKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIY 233
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
GL ++I EA LL +M P+ TY LI A+ + A+ L+ QM + I
Sbjct: 234 GLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALC-GSGQKSEAMNLFKQMSESGIK 292
Query: 196 VPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
YT LI C+ + +D+A + M+ +G P+++TYN LI +C + V AMG+
Sbjct: 293 PDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGL 351
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
M ++ L PD + NTLI C G L+ A+ + + M E G++PN T
Sbjct: 352 LSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 6/261 (2%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGL 137
++ +EM+ P + T+N L++ YC+ V EA + + +P+ ++ + I G
Sbjct: 141 RLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGH 200
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
C ++ + A ++ +EM G + V+Y LI + + + A++L +MK
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK-IDEALSLLVKMKDDNCCPN 259
Query: 198 WTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
TYT LI LC + +A +F +M SG +P Y LI ++C D + +A G+
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
M + GL P+ + N LI FCK + KA + ++M+E+ ++P+ TY+ LI C
Sbjct: 320 HMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
Query: 317 RLSEAFDLFREMLGGGLSPRE 337
L A+ L M GL P +
Sbjct: 379 NLDSAYRLLSLMEESGLVPNQ 399
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 142/352 (40%), Gaps = 55/352 (15%)
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
FC+ +FE++ ++ + Y+ L+ L + E L+ EML +SP
Sbjct: 102 FCRTMRKGDSFEIKYKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPD 154
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
Y + LV YC +G +A +I G PD+ T Y + I G+C V
Sbjct: 155 IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFT--------YTSFITGHCRRKEV 206
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFS 456
+ A + + M + ++VSY +I G + ++ +A L+V+M + V
Sbjct: 207 DAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR----- 261
Query: 457 SLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGF---DKK 513
Y +I+A C G+ S+A+ L +M G +Y +L F D
Sbjct: 262 ----------TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTL 311
Query: 514 ARTRGAKESLLRMFYDLCTSLP-TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAAS 572
G E +L +P TY+ LI KGF + + ++A
Sbjct: 312 DEASGLLEHMLEN-----GLMPNVITYNALI---------------KGFCKKNV-HKAMG 350
Query: 573 VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSV 624
+L+ +L+ N PD YN LI C N+D AY + M G + +V
Sbjct: 351 LLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 129/337 (38%), Gaps = 49/337 (14%)
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
N +Y+ L+ LC Q E + M+ S R+ + V +C +F ++
Sbjct: 59 NVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALF---VVDFCRTMRKGDSFEIK 115
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
++ K YN L+ G VEE + M E +SPD ++N
Sbjct: 116 YKLTPK---------------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNT 160
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGE 480
+++G+CKLG + +A + + + +AG D Y S I +C E
Sbjct: 161 LVNGYCKLGYVVEAKQYVTWLIQAGCD---------------PDYFTYTSFITGHCRRKE 205
Query: 481 VSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYD 540
V A + EM +G R V Y L G + + A L++M D C
Sbjct: 206 VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNC--------- 256
Query: 541 TLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRR 600
C N ++ L G K+EA ++ + + KPD +Y LI C
Sbjct: 257 -----CPN--VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
Query: 601 NVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRH 637
+D+A + M+ G ++ + ALIK H
Sbjct: 310 TLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVH 346
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C Q A + +M SG P Y VL+ ++C +DEA G+L M + PNV
Sbjct: 271 CGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNV 330
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL 178
+++N +I G C K+ + +A LL +M + L PD +TYNTLI + NL
Sbjct: 331 ITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNL 380
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 466 VNYNSVINAYCAEG---EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKES 522
+Y S++ C++ EV K IL ++ S+R + L+++ F +K + K
Sbjct: 61 TSYASLVTLLCSQEIPYEVPKITILM--IKSCNSVRDA-LFVVDFCRTMRKGDSFEIKYK 117
Query: 523 LL-RMFYDLCTSLPTF--------TYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASV 573
L + + +L +SL F Y ++E+ + + + L G+ G EA
Sbjct: 118 LTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQY 177
Query: 574 LNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFH 633
+ ++Q PD Y I HCRR+ VD A+ ++ EM G + S LI LF
Sbjct: 178 VTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFE 237
Query: 634 VGRHNE 639
+ +E
Sbjct: 238 AKKIDE 243
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 161/660 (24%), Positives = 278/660 (42%), Gaps = 119/660 (18%)
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKE------ 145
V YN ++ Y R + +A ++ M P+++SFNT+I+ R+K
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINA-----RLKSGGLTPN 279
Query: 146 -AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSL 204
A ELL + + GL PD++TYNTL++A S+++NL A+ +++ M+ R TY ++
Sbjct: 280 LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNL-DGAVKVFEDMEAHRCQPDLWTYNAM 338
Query: 205 IHLL--CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG 262
I + C + A ++F E+ GF P VTYN L++A+ + +++ M G
Sbjct: 339 ISVYGRCGLAAE-AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 263 LTPDAVICNTLITFFCKYGELEKAFEMRAEMVE-RGILPNADTYSKLIDCLCPQRRLSEA 321
D + NT+I + K G+L+ A ++ +M G P+A TY+ LID L R EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 322 FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
L EML G+ P Y L+ Y G+ +A M+ G PD + +S V
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLA-YS---V 513
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
+ L+ GN +A G+ R M +P Y ++I G K + + +M
Sbjct: 514 MLDVLLRGN----ETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Query: 442 DEAGGIRGVDLAVFSSLMKGLSDEVNYN------------------SVINAYCAEGEVSK 483
+E G+ ++++ S L+KG ++ S++ +Y + G S+
Sbjct: 570 EELCGMNPLEIS--SVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSE 627
Query: 484 ALILHDEMEHH--GSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF---- 537
A L + ++ H GS R +++ + +L F D C F
Sbjct: 628 AFELLEFLKEHASGSKRLITEALIVL-----HCKVNNLSAALDEYFADPCVHGWCFGSST 682
Query: 538 TYDTLIENCSNNEF-----------------------KSVVEL----------------- 557
Y+TL+ C NE KS+V +
Sbjct: 683 MYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQA 742
Query: 558 -AKGF---------------GMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRN 601
KGF G + L +A SV+ + Q PD +N L+ + +
Sbjct: 743 ETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGC 802
Query: 602 VDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFELHKA 661
++A ++ M+ G + + S+ L+ AL GR E+ V++ + GF++ K+
Sbjct: 803 YERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEEL----QDMGFKISKS 858
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 166/399 (41%), Gaps = 46/399 (11%)
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE--AFDLFR 326
+ N ++ + + G+ KA E+ M +RG +P+ +++ LI+ L+ A +L
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 327 EMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNAL 386
+ GL P Y L+ A A + ++M PD L TYNA+
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPD--------LWTYNAM 338
Query: 387 I--YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA 444
I YG C G EA + + PD V+YN ++ F + K E+ +M +
Sbjct: 339 ISVYGRC--GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 445 GGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH-HGSLRASVLY 503
G + DE+ YN++I+ Y +G++ AL L+ +M+ G ++ Y
Sbjct: 397 GFGK---------------DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 504 IMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGM 563
+L D K RT A +L+ D+ TY LI C G+
Sbjct: 442 TVLIDSLGKANRTVEAA-ALMSEMLDVGIKPTLQTYSALI--C-------------GYAK 485
Query: 564 RGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFS 623
G + EA + +L+ KPD Y+ ++ R KA+ +Y +M+ G
Sbjct: 486 AGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTL 545
Query: 624 VLALIKALFHVGRHNEVRRVIQNVLRSCNINGFELHKAL 662
+I L R +++++ I+++ C +N E+ L
Sbjct: 546 YELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVL 584
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 154/406 (37%), Gaps = 81/406 (19%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVI 134
A V+ + SG P + T+N L+ AY + + A I M + P V S N ++
Sbjct: 770 KAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILL 829
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
LC R++E +++E+ G + ++ A ++ N+
Sbjct: 830 HALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF--------------- 874
Query: 195 PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA--- 251
+ K+++ M A+G+ P++ Y +I C RV+DA
Sbjct: 875 --------------------EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIM 914
Query: 252 --------------------------------MGIFRGMPDRGLTPDAVICNTLITFFCK 279
+ +++ + + GL PD NTLI +C+
Sbjct: 915 VSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCR 974
Query: 280 YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYA 339
E+ + + +M G+ P DTY LI Q+ L +A LF E+L GL
Sbjct: 975 DRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSF 1034
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEA 399
Y ++ G SKA L M + G P+L T + L+ G +EA
Sbjct: 1035 YHTMMKISRDSGSDSKAEKLLQMMKNAG--------IEPTLATMHLLMVSYSSSGNPQEA 1086
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+L + + + + Y+ VI + + + E ++EM + G
Sbjct: 1087 EKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEG 1132
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 132/659 (20%), Positives = 254/659 (38%), Gaps = 82/659 (12%)
Query: 57 GLDPARESLIHLLCCDQLQNDN----AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVD 112
G +P +++ + + D L N A ++SEM++ G P++ TY+ L+ Y + + +
Sbjct: 433 GRNP--DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 113 EAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLI 169
EA M +P+ ++++ ++D L ++A L ++M S G P Y +I
Sbjct: 491 EAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Query: 170 TAMSKN--TNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASG 227
+ K ++ + + I +++ P + L+ C D A + I +G
Sbjct: 551 LGLMKENRSDDIQKTIRDMEELCGMN---PLEISSVLVKGEC---FDLAARQLKVAITNG 604
Query: 228 FEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAF 287
+E T ++ +Y R +A + + + +I LI CK L A
Sbjct: 605 YELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAAL 664
Query: 288 -EMRAEMVERGILPNADT-YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
E A+ G + T Y L+ C +EA +F ++ G E ++V
Sbjct: 665 DEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVV 724
Query: 346 AYCLVGEFSKAFHLRDEMIHKGF-------LPDFVTEF---------------------S 377
YC +G A + ++ KGF D + + +
Sbjct: 725 VYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRT 784
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P L T+N+L+ G E A I M SP S NI++ C G L + + +
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
+ E+ + G ++ S L+ +++A+ G + + ++ M+ G L
Sbjct: 845 VEELQDMG----FKISKSSILL-----------MLDAFARAGNIFEVKKIYSSMKAAGYL 889
Query: 498 RASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVEL 557
LY M+ + K R R A+ + M F + I N + ++ +
Sbjct: 890 PTIRLYRMMIELLCKGKRVRDAEIMVSEM------EEANFKVELAIWNSMLKMYTAIEDY 943
Query: 558 AKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGF 617
K V + + +PD YN LI+ +CR R ++ Y + +M + G
Sbjct: 944 KK----------TVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 618 ASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFELHKALSETGVIVREDKVKD 676
+ + +LI A + ++ + +L G +L ++ T + + D D
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLS----KGLKLDRSFYHTMMKISRDSGSD 1048
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 9/274 (3%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPA---RESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVA 96
+G + + S M G P +I LLC + D A ++SEM + F +A
Sbjct: 870 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRD-AEIMVSEMEEANFKVELA 928
Query: 97 TYNVLLHAYC--RD-KRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
+N +L Y D K+ + ++ +EP+ ++NT+I C RR +E L+Q+M
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV 213
+ GL P TY +LI+A K L +A L++++ + + + + Y +++ +
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLE-QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGS 1047
Query: 214 D-KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
D KA K+ M +G EP+L T + L+ +Y Q+A + + D + + ++
Sbjct: 1048 DSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+I + + + E EM + G+ P+ ++
Sbjct: 1108 VIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWT 1141
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 138/345 (40%), Gaps = 48/345 (13%)
Query: 53 MNRKGLDPARES---LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
M R G P ES L+H LC D + + Y V+ E+ + GF S ++ ++L A+ R
Sbjct: 813 MMRDGPSPTVESINILLHALCVDG-RLEELYVVVEELQDMGFKISKSSILLMLDAFARAG 871
Query: 110 RVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
+ E I M P + + +I+ LC +R+++AE ++ EM + +N
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWN 931
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIA 225
+++ M + + +Y ++K+ + TTY +LI + C ++ Y + +M
Sbjct: 932 SMLK-MYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN 990
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
G +P L TY LI A+ + ++ A +F + +GL D +T++ G K
Sbjct: 991 LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSK 1050
Query: 286 AFEMRAEMVERGILPNADT-----------------------------------YSKLID 310
A ++ M GI P T YS +ID
Sbjct: 1051 AEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVID 1110
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSK 355
+ + + EM GL P + V A FSK
Sbjct: 1111 AYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA----ASFSK 1151
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 136/560 (24%), Positives = 234/560 (41%), Gaps = 53/560 (9%)
Query: 98 YNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRR-IKEAEELLQEMNSK 156
Y++L+HA R +++ EA + + + P +++N +I G CA+ I++A L+ +M
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQTLTP--LTYNALI-GACARNNDIEKALNLIAKMRQD 226
Query: 157 GLAPDSVTYNTLITAMSKNTNL-VIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVD 214
G D V Y+ +I +++++ + + + LY ++++ ++ + +I + +
Sbjct: 227 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 286
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
KA ++ A+G T +I A R +A +F + G+ P N L+
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+ K G L+ A M +EM +RG+ P+ TYS LID R A + +EM G +
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI--YG--N 390
P + + L+ + GE+ K F + EM G PD +F YN +I +G N
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD--RQF------YNVVIDTFGKFN 458
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGV 450
CL + A+ M + PD V++N +I CK G A E+ M+ G
Sbjct: 459 CL----DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG----- 509
Query: 451 DLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGF 510
L YN +IN+Y + L +M+ G L V + L D +
Sbjct: 510 ----------CLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVY 559
Query: 511 DKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEA 570
K R A E L M + + Y+ LI + RGL +A
Sbjct: 560 GKSGRFNDAIECLEEM-KSVGLKPSSTMYNALI---------------NAYAQRGLSEQA 603
Query: 571 ASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKA 630
+ + KP N LI R +A+ + M G + + L+KA
Sbjct: 604 VNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Query: 631 LFHVGRHNEVRRVIQNVLRS 650
L V + +V V + ++ S
Sbjct: 664 LIRVDKFQKVPVVYEEMIMS 683
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 182/433 (42%), Gaps = 20/433 (4%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTVI 134
A ++L +G AT ++ A R EA + LR ++P ++N ++
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
G +K+AE ++ EM +G++PD TY+ LI A I L +
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 195 PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
P + L K ++V EM + G +P YN +I + + + AM
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F M G+ PD V NTLI CK+G A EM M RG LP A TY+ +I+
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 526
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
Q R + L +M G+ P + LV Y G F+ A +EM G
Sbjct: 527 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG------- 579
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
PS YNALI G E+A+ R M L P ++ N +I+ F + +A
Sbjct: 580 -LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 638
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGL-------SDEVNYNSVINAYCAEGEVSKALIL 487
F ++ M E G++ D+ +++LMK L V Y +I + C +++++
Sbjct: 639 FAVLQYMKE-NGVKP-DVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLR 696
Query: 488 HDEMEHHGSLRAS 500
+LRAS
Sbjct: 697 SALRYMKQTLRAS 709
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 130/262 (49%), Gaps = 4/262 (1%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM--AVEPNVVSFNTVI 134
D A K+ M G +A++N +L C+ KRV++A + R + + V++N ++
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVIL 202
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+G C +R +A E+L+EM +G+ P+ TYNT++ + + A + +MK++
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR-AGQIRHAWEFFLEMKKRDC 261
Query: 195 PVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
+ TYT+++H + +A VF EMI G PS+ TYN +I C +D V++A+
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
+F M RG P+ N LI GE + E+ M G PN TY+ +I
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Query: 314 PQRRLSEAFDLFREMLGGGLSP 335
+ +A LF +M G P
Sbjct: 382 ECSEVEKALGLFEKMGSGDCLP 403
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 154/337 (45%), Gaps = 51/337 (15%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEEL 149
PS T+ ++ Y + D+A+ + M ++ SFNT++D LC +R+++A EL
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
+ + + + D+VTYN ++ N +I+ R P
Sbjct: 184 FRALRGR-FSVDTVTYNVIL-----NGWCLIK-----------RTP-------------- 212
Query: 210 TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
KA +V EM+ G P+L TYN ++ + +++ A F M R D V
Sbjct: 213 -----KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
T++ F GE+++A + EM+ G+LP+ TY+ +I LC + + A +F EM+
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI-- 387
G P Y L+ GEFS+ L M ++G P+F TYN +I
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF--------QTYNMMIRY 379
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
Y C VE+ALG+ M P+ +YNI+ISG
Sbjct: 380 YSEC--SEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 142/334 (42%), Gaps = 25/334 (7%)
Query: 184 ALYDQMKQQRI-PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAY 242
+L +M+ RI P P T DKA K+F M G L ++N ++
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 243 CCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNA 302
C RV+ A +FR + R + D V N ++ +C KA E+ EMVERGI PN
Sbjct: 172 CKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
TY+ ++ ++ A++ F EM Y +V + + GE +A ++ DE
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 363 MIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
MI +G LP S+ TYNA+I C VE A+ + M P+ +YN++I
Sbjct: 291 MIREGVLP--------SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 423 SGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVS 482
G GE + ELM M+ G YN +I Y EV
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQ---------------TYNMMIRYYSECSEVE 387
Query: 483 KALILHDEMEHHGSLRASVLYIMLFDGFDKKART 516
KAL L ++M L Y +L G + R+
Sbjct: 388 KALGLFEKMGSGDCLPNLDTYNILISGMFVRKRS 421
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 6/251 (2%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C + + AY++ + F TYNV+L+ +C KR +A+ +L+ M + PN+
Sbjct: 172 CKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
++NT++ G +I+ A E EM + D VTY T++ + RA ++D
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGV-AGEIKRARNVFD 289
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M ++ + TY ++I +LC NV+ A +F EM+ G+EP++ TYN LI
Sbjct: 290 EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ + M + G P+ N +I ++ + E+EKA + +M LPN DTY+
Sbjct: 350 EFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYN 409
Query: 307 KLIDCLCPQRR 317
LI + ++R
Sbjct: 410 ILISGMFVRKR 420
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 149/335 (44%), Gaps = 13/335 (3%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
SF+ ID L+ M S + P T+ ++ + +A+ L+
Sbjct: 93 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTF-AIVAERYASAGKPDKAVKLFLN 151
Query: 189 MKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
M + ++ +++ +LC + V+KAY++F + F VTYN +++ +C R
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKR 210
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
A+ + + M +RG+ P+ NT++ F + G++ A+E EM +R + TY+
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
++ + A ++F EM+ G+ P Y ++ C A + +EM+ +G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
+ P++ TYN LI G G +++ M P+ +YN++I + +
Sbjct: 331 Y--------EPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
E+ KA L +M + +D ++ L+ G+
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLD--TYNILISGM 415
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 142/340 (41%), Gaps = 83/340 (24%)
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
+ G+ +KA ++ M E G + +++ ++D LC +R+ +A++LFR + G
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRG------ 189
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
FS VTYN ++ G CL+ R
Sbjct: 190 --------------------------------------RFSVDTVTYNVILNGWCLIKRT 211
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFS 456
+AL +L+ M E ++P+ +YN ++ GF + G++ A+E +EM + R ++
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK----RDCEI---- 263
Query: 457 SLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKART 516
D V Y +V++ + GE+ +A + DEM G L + Y + KK
Sbjct: 264 -------DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 316
Query: 517 RGAK---ESLLRMFYDLCTSLPTFTYDTLIENCSN-NEFKSVVELAKGFGMRGLKNEAAS 572
A E ++R Y+ + TY+ LI + EF EL M+ ++NE
Sbjct: 317 ENAVVMFEEMVRRGYEPNVT----TYNVLIRGLFHAGEFSRGEEL-----MQRMENEGC- 366
Query: 573 VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
+P+ YN +I + V+KA ++ +M
Sbjct: 367 ----------EPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 113/271 (41%), Gaps = 34/271 (12%)
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
PS T+ + G+ ++A+ + M E D S+N ++ CK + KA+EL
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGS 496
F +L S D V YN ++N +C KAL + EM G
Sbjct: 184 -----------------FRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGI 226
Query: 497 LRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVE 556
Y + GF + + R A E L M C + TY T++
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC-EIDVVTYTTVVH------------ 273
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
GFG+ G A +V + +++ P A YN +I C++ NV+ A M+ EMV G
Sbjct: 274 ---GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 617 FASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
+ ++ + LI+ LFH G + ++Q +
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 38/175 (21%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A V EM+ G LPSVATYN ++ C+ V+ A+ + M EPNV ++N +I
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
GL EEL+Q M ++G P+ TYN +I S+
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE--------------------- 382
Query: 196 VPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
C+ V+KA +F +M + P+L TYN LI R R +D
Sbjct: 383 -------------CS-EVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 195/466 (41%), Gaps = 53/466 (11%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A VL EM + TYN L+ AY R EA G++ M V PN +++ TVID
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNT--NLVIRAIALYDQMKQQR 193
+ EA +L M G P++ TYN +++ + K + N +I+ + MK
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLC---DMKSNG 451
Query: 194 IPVPWTTYTSLIHLLCTYNVDK-AYKVFTEMIASGFEPSLVTYNELIHAYC-CRDRVQDA 251
T+ +++ L +DK +VF EM + GFEP T+N LI AY C V DA
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV-DA 510
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
++ M G N L+ + G+ + ++M +G P +YS ++ C
Sbjct: 511 SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570
Query: 312 LCP----------QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
+ R+ E ML L + L G+ F K + D
Sbjct: 571 YAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPD 630
Query: 362 EMIHKGFLPDFVTE-----------------FSPSLVTYNALIYGNCLLGRVEEALGILR 404
+I L F SP LVTYN+L+ G +A IL+
Sbjct: 631 MVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILK 690
Query: 405 GMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSD 464
+ + L PD VSYN VI GFC+ G + +A ++ EM E RG+ +F+
Sbjct: 691 TLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE----RGIRPCIFT-------- 738
Query: 465 EVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGF 510
YN+ ++ Y A G ++ + + M + + + M+ DG+
Sbjct: 739 ---YNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGY 781
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 142/599 (23%), Positives = 261/599 (43%), Gaps = 56/599 (9%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFN 131
Q A K+L ++ +L V Y +LHAY R + ++A+ + ++ M P +V++N
Sbjct: 190 QYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYN 249
Query: 132 TVIDGLCA-KRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
++D R ++ +L EM SKGL D T +T+++A ++ L+ A + ++K
Sbjct: 250 VILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACARE-GLLREAKEFFAELK 308
Query: 191 QQRIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
TY +L+ + V +A V EM + VTYNEL+ AY +
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+A G+ M +G+ P+A+ T+I + K G+ ++A ++ M E G +PN TY+ ++
Sbjct: 369 EAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
L + R +E + +M G SP A +N + A C D+ +++ F
Sbjct: 429 SLLGKKSRSNEMIKMLCDMKSNGCSPNR-ATWNTMLALC-------GNKGMDKFVNRVFR 480
Query: 370 PDFVTEFSPSLVTYNALI--YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
F P T+N LI YG C G +A + M + +YN +++ +
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRC--GSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSV--INAYCAEGEVSKAL 485
G+ ++ +M ++ G + + + +S +++ + NY + I EG++ +
Sbjct: 539 KGDWRSGENVISDM-KSKGFKPTETS-YSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 486 ILHDEM--------EHHGSLRASVLYIMLFDGFDKKARTRGAK------ESLLRMF---- 527
+L + GS RA L+ + G K S+L +F
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLF-----------KKHGYKPDMVIFNSMLSIFTRNN 645
Query: 528 -YDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDG 586
YD + +++ E+ + + + L + RG +A +L T+ + KPD
Sbjct: 646 MYDQAEGI----LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDL 701
Query: 587 AVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQ 645
YN +I CRR + +A M EM G +F+ + +G E+ VI+
Sbjct: 702 VSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIE 760
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 209/486 (43%), Gaps = 53/486 (10%)
Query: 45 KTTTTVSEMNRKGL--DPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLL 102
K + EM KGL D S + C + A + +E+ + G+ P TYN LL
Sbjct: 264 KILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALL 323
Query: 103 HAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLA 159
+ + EA+ +L+ M + + V++N ++ KEA +++ M KG+
Sbjct: 324 QVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM 383
Query: 160 PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYK 218
P+++TY T+I A K A+ L+ MK+ TY +++ LL + ++ K
Sbjct: 384 PNAITYTTVIDAYGK-AGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM--GIFRGMPDRGLTPDAVICNTLITF 276
+ +M ++G P+ T+N ++ C ++ D +FR M G PD NTLI+
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLA--LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
+ + G A +M EM G TY+ L++ L + ++ +M G P
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT---------------------- 374
E +Y ++ Y G + + + + P ++
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 620
Query: 375 -----EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+ P +V +N+++ ++A GIL + E LSPD V+YN ++ + + G
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 430 ELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHD 489
E KA E++ +++ S +K D V+YN+VI +C G + +A+ +
Sbjct: 681 ECWKAEEILKTLEK-------------SQLK--PDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 490 EMEHHG 495
EM G
Sbjct: 726 EMTERG 731
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 176/391 (45%), Gaps = 24/391 (6%)
Query: 36 KKVTSGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLP 93
KK S ++K + +M G P R + +L C ++ + +V EM + GF P
Sbjct: 433 KKSRSNEMIKM---LCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 94 SVATYNVLLHAYCR-DKRVDEA--MGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELL 150
T+N L+ AY R VD + G + V ++N +++ L K + E ++
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTN-LVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
+M SKG P +Y+ ++ +K N L I I +++K+ +I W +L LL
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIE--NRIKEGQIFPSWMLLRTL--LLA 605
Query: 210 TYN---VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPD 266
+ + + + FT G++P +V +N ++ + + A GI + + GL+PD
Sbjct: 606 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
V N+L+ + + GE KA E+ + + + P+ +Y+ +I C + + EA +
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 327 EMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNAL 386
EM G+ P + Y V Y +G F++ + + M + P+ +T+ +
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK--------NDCRPNELTFKMV 777
Query: 387 IYGNCLLGRVEEALGILRGMAEMSLSPDDVS 417
+ G C G+ EA+ + + DD S
Sbjct: 778 VDGYCRAGKYSEAMDFVSKIKTFDPCFDDQS 808
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 159/388 (40%), Gaps = 44/388 (11%)
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ-RRLSEAFDLFREML 329
T++ + + G+ EKA ++ M E G P TY+ ++D R + + EM
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYG 389
GL E+ ++ A G +A E+ G+ P VTYNAL+
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY--------EPGTVTYNALLQV 325
Query: 390 NCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
G EAL +L+ M E S D V+YN +++ + + G K ++EM G+
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG-FSKEAAGVIEMMTKKGV-- 382
Query: 450 VDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDG 509
+ + + Y +VI+AY G+ +AL L M+ G + + Y +
Sbjct: 383 ------------MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 510 FDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNE 569
KK+R+ + L M + C S T++T++ C N +G+
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNGC-SPNRATWNTMLALCGN---------------KGMDKF 474
Query: 570 AASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIK 629
V + ++PD +N LI + R + A MY EM GF + + + AL+
Sbjct: 475 VNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 534
Query: 630 ALFHVGRHNEVRRVIQNVLRSCNINGFE 657
AL G R +NV+ GF+
Sbjct: 535 ALARKGDW----RSGENVISDMKSKGFK 558
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 136/330 (41%), Gaps = 44/330 (13%)
Query: 352 EFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSL 411
++S A L D++ + +L D + Y +++ G+ E+A+ + M EM
Sbjct: 190 QYSVAAKLLDKIPLQEYLLD--------VRAYTTILHAYSRTGKYEKAIDLFERMKEMGP 241
Query: 412 SPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS-DEVNYNS 470
SP V+YN+++ F K+G + +++ +DE KGL DE ++
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWR--KILGVLDEMRS-------------KGLKFDEFTCST 286
Query: 471 VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDL 530
V++A EG + +A E++ G +V Y L F K A L M +
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 531 CTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYN 590
C + + TY+ EL + G EAA V+ + + P+ Y
Sbjct: 347 CPA-DSVTYN---------------ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 591 FLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
+I + + D+A ++ M G + + A++ L R NE+ +++ ++
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM--- 447
Query: 651 CNINGFELHKALSETGVIVREDKVKDVLLN 680
NG ++A T + + +K D +N
Sbjct: 448 -KSNGCSPNRATWNTMLALCGNKGMDKFVN 476
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 171/389 (43%), Gaps = 59/389 (15%)
Query: 127 VVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALY 186
V +F+ +I +EA + M GL P+ VTYN +I A K + + +A +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKG-GMEFKQVAKF 326
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
F EM +G +P +T+N L+ A C R
Sbjct: 327 ---------------------------------FDEMQRNGVQPDRITFNSLL-AVCSRG 352
Query: 247 RVQDAM-GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
+ +A +F M +R + D NTL+ CK G+++ AFE+ A+M + I+PN +Y
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
S +ID R EA +LF EM G++ +Y L+ Y VG +A + EM
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
G D +VTYNAL+ G G+ +E + M + P+ ++Y+ +I G+
Sbjct: 473 VGIKKD--------VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 426 CKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKAL 485
K G +A E+ E A G+R +D V Y+++I+A C G V A+
Sbjct: 525 SKGGLYKEAMEIFREFKSA-GLR--------------ADVVLYSALIDALCKNGLVGSAV 569
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKA 514
L DEM G V Y + D F + A
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 130/267 (48%), Gaps = 7/267 (2%)
Query: 52 EMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
EM R G+ P R + LL C + A + EM N V +YN LL A C+
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 110 RVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
++D A IL M V+ PNVVS++TVIDG R EA L EM G+A D V+YN
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIA 225
TL++ +K A+ + +M I TY +L+ D+ KVFTEM
Sbjct: 449 TLLSIYTK-VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
P+L+TY+ LI Y ++AM IFR GL D V+ + LI CK G +
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCL 312
A + EM + GI PN TY+ +ID
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 51/350 (14%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A ++ G+ +V ++ L+ AY R +EA+ + M + PN+V++N VID
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 136 GLCAK--RRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
C K K+ + EM G+ PD +T+N+L+ S+ L A L+D+M +R
Sbjct: 312 A-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG-GLWEAARNLFDEMTNRR 369
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
I +Y +L+ +C +D A+++ +M P++V+Y+ +I + R +A+
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI-------------- 298
+F M G+ D V NTL++ + K G E+A ++ EM GI
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 299 ---------------------LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
LPN TYS LID EA ++FRE GL
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
Y L+ A C G A L DEM +G SP++VTYN++I
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTKEG--------ISPNVVTYNSII 591
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 211/502 (42%), Gaps = 59/502 (11%)
Query: 149 LLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD--QMKQQRIPVPWTTYTSLIH 206
L+ SK D TY I N N +A+ Y+ +++R +++I
Sbjct: 185 LMLSFESKLCGSDDCTY---IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMIS 241
Query: 207 LLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
L Y V A ++F A G+ ++ ++ LI AY ++A+ +F M + GL P
Sbjct: 242 TLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRP 301
Query: 266 DAVICNTLITFFCKYG-ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF-D 323
+ V N +I K G E ++ + EM G+ P+ T++ L+ +C + L EA +
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARN 360
Query: 324 LFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTY 383
LF EM + ++Y L+ A C G+ AF + +M K +P+ +V+Y
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPN--------VVSY 412
Query: 384 NALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE 443
+ +I G GR +EAL + M + ++ D VSYN ++S + K+G +A +++ EM
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 444 AGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLY 503
G + D V YN+++ Y +G+ + + EM+ L + Y
Sbjct: 473 VGIKK---------------DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTY 517
Query: 504 IMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGM 563
L DG+ K + A E + R F Y LI+ N
Sbjct: 518 STLIDGYSKGGLYKEAME-IFREFKSAGLRADVVLYSALIDALCKN-------------- 562
Query: 564 RGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFS 623
GL A S+++ + + P+ YN +I R +D++ + Y F+S S
Sbjct: 563 -GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD-YSNGGSLPFSSSALS 620
Query: 624 VLALIKALFHVGRHNEVRRVIQ 645
L E RVIQ
Sbjct: 621 ALT----------ETEGNRVIQ 632
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 73 QLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR---GMAVEPNVVS 129
Q + D KV +EM LP++ TY+ L+ Y + EAM I R + +VV
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL 178
++ +ID LC + A L+ EM +G++P+ VTYN++I A ++ +
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 166/677 (24%), Positives = 299/677 (44%), Gaps = 81/677 (11%)
Query: 22 FTAAAAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARESLI-HLLCCDQL-----Q 75
FT +A++ S ++ KKV K TT+ + RK R + + H + D+L Q
Sbjct: 42 FTVSASSSSESTQNKKVWRKQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQ 101
Query: 76 NDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----PNVVSFN 131
N ++ S + S + + ++ R+ ++ +L + E P+V ++N
Sbjct: 102 TQNEKELFSLL--STYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYN 159
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
V+ + ++ A L EM + LAPD TY+TLIT+ K + A++ +M+Q
Sbjct: 160 VVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKE-GMFDSALSWLQKMEQ 218
Query: 192 QRIPVPWTTYTSLIHL---LCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRV 248
R+ Y++LI L LC Y+ KA +F+ + SG P LV YN +I+ Y
Sbjct: 219 DRVSGDLVLYSNLIELSRRLCDYS--KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLF 276
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
++A + + M + G+ P+ V +TL++ + + + +A + AEM E + T + +
Sbjct: 277 REARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIM 336
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
ID + EA LF + + P +Y ++ Y F +A HL M K
Sbjct: 337 IDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK-- 394
Query: 369 LPDFVTEFSPSLVTYNAL--IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
+ ++VTYN + IYG + E+A +++ M + P+ ++Y+ +IS +
Sbjct: 395 ------DIEQNVVTYNTMIKIYGKTM--EHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 427 KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALI 486
K G+L +A L ++ + GV++ D+V Y ++I AY G + A
Sbjct: 447 KAGKLDRAATLFQKLRSS----GVEI-----------DQVLYQTMIVAYERVGLMGHAKR 491
Query: 487 LHDEMEHHGSL-RASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN 545
L E++ ++ R + + I+ K RT A + R ++ + +I
Sbjct: 492 LLHELKLPDNIPRETAITILA-----KAGRTEEAT-WVFRQAFESGEVKDISVFGCMINL 545
Query: 546 CSNNE-FKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDK 604
S N+ + +V+E+ + G Y PD V ++ + ++R +K
Sbjct: 546 YSRNQRYVNVIEVFEKMRTAG----------------YFPDSNVIAMVLNAYGKQREFEK 589
Query: 605 AYNMYMEMVHYG--FASHM-FSVLALI--KALFHVGRHNEVRRVIQNVLRSCNINGFELH 659
A +Y EM G F + F +L+L K F + V + Q + N+N ELH
Sbjct: 590 ADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEM-----VESLFQRLESDPNVNSKELH 644
Query: 660 KALSETGVIVREDKVKD 676
L + R DK+ D
Sbjct: 645 --LVVAALYERADKLND 659
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 38/254 (14%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
NA + +EM G P+V TYN ++ ++C R +A +LR M + P++V+F+ +I
Sbjct: 28 NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALI 87
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+ +R++ EAEE+ +EM + P ++TYN++I KQ R
Sbjct: 88 NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC----------------KQDR- 130
Query: 195 PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
VD A ++ M + G P +VT++ LI+ YC RV + M I
Sbjct: 131 ------------------VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F M RG+ + V TLI FC+ G+L+ A ++ EM+ G+ P+ T+ ++ LC
Sbjct: 173 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 232
Query: 315 QRRLSEAFDLFREM 328
++ L +AF + ++
Sbjct: 233 KKELRKAFAILEDL 246
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 9/257 (3%)
Query: 189 MKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
M Q I T+++ LC N A +FTEM G P+++TYN +I ++C R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
DA + R M ++ + PD V + LI F K ++ +A E+ EM+ I P TY+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
+ID C Q R+ +A + M G SP + L+ YC + EM +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
+ + VTY LI+G C +G ++ A +L M ++PD ++++ +++G C
Sbjct: 181 IVAN--------TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 232
Query: 428 LGELGKAFELMVEMDEA 444
EL KAF ++ ++ ++
Sbjct: 233 KKELRKAFAILEDLQKS 249
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 123/242 (50%), Gaps = 2/242 (0%)
Query: 123 VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRA 182
++ +VV ++D LC A+ L EM+ KG+ P+ +TYN +I + + A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS-DA 64
Query: 183 IALYDQMKQQRIPVPWTTYTSLIHLLCT-YNVDKAYKVFTEMIASGFEPSLVTYNELIHA 241
L M +++I T+++LI+ V +A +++ EM+ P+ +TYN +I
Sbjct: 65 DQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG 124
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
+C +DRV DA + M +G +PD V +TLI +CK ++ E+ EM RGI+ N
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
TY+ LI C L A DL EM+ G++P + ++ C E KAF + +
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Query: 362 EM 363
++
Sbjct: 245 DL 246
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 118/225 (52%), Gaps = 9/225 (4%)
Query: 41 GGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
G + +EM+ KG+ P +I C +D A ++L M+ P + T
Sbjct: 24 GNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD-ADQLLRHMIEKQINPDIVT 82
Query: 98 YNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
++ L++A+ ++++V EA I + M ++ P +++N++IDG C + R+ +A+ +L M
Sbjct: 83 FSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMA 142
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NV 213
SKG +PD VT++TLI K V + ++ +M ++ I TYT+LIH C ++
Sbjct: 143 SKGCSPDVVTFSTLINGYCK-AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 201
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
D A + EMI+ G P +T++ ++ C + ++ A I +
Sbjct: 202 DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 23/262 (8%)
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
M + D VI ++ CK G A + EM E+GI PN TY+ +ID C R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 318 LSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
S+A L R M+ ++P + L+ A+ + S+A + EM+ P
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP------- 113
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
+ +TYN++I G C RV++A +L MA SPD V+++ +I+G+CK + E+
Sbjct: 114 -TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
EM RG+ +++ V Y ++I+ +C G++ A L +EM G
Sbjct: 173 FCEMHR----RGI-----------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Query: 498 RASVLYIMLFDGFDKKARTRGA 519
+ + + G K R A
Sbjct: 218 PDYITFHCMLAGLCSKKELRKA 239
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C Q + D+A ++L M + G P V T++ L++ YC+ KRVD M I M + N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V++ T+I G C + A++LL EM S G+APD +T++ ++ + L +A A+ +
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR-KAFAILE 244
Query: 188 QMKQ 191
+++
Sbjct: 245 DLQK 248
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 104/259 (40%), Gaps = 33/259 (12%)
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
+ +V A++ C G A + M E + P+ ++YN +I FC G
Sbjct: 4 SHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD 63
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
A +L+ M E + D V ++++INA+ E +VS+A ++ EM
Sbjct: 64 ADQLLRHMIEK---------------QINPDIVTFSALINAFVKERKVSEAEEIYKEMLR 108
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFK 552
++ Y + DGF K+ R AK L M C S T+ TLI C
Sbjct: 109 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC-SPDVVTFSTLINGYCKAKRVD 167
Query: 553 SVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
+ +E+ RG+ V NTV Y LI C+ ++D A ++ EM
Sbjct: 168 NGMEIFCEMHRRGI------VANTV----------TYTTLIHGFCQVGDLDAAQDLLNEM 211
Query: 613 VHYGFASHMFSVLALIKAL 631
+ G A + ++ L
Sbjct: 212 ISCGVAPDYITFHCMLAGL 230
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 34/249 (13%)
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE 465
M + + D V ++ CK G A L EM E G +F +++
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKG--------IFPNVL------ 46
Query: 466 VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLR 525
YN +I+++C G S A L M V + L + F K+ + A+E
Sbjct: 47 -TYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKE 105
Query: 526 MFYDLCTSLPT-FTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKP 584
M + PT TY+++I+ GF + ++A +L+++ P
Sbjct: 106 MLR--WSIFPTTITYNSMID---------------GFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 585 DGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVI 644
D ++ LI +C+ + VD ++ EM G ++ + LI VG + + ++
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 645 QNVLRSCNI 653
N + SC +
Sbjct: 209 -NEMISCGV 216
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 201/489 (41%), Gaps = 69/489 (14%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR---GMAVEPNV 127
C++++ A V+ EM GF V ++ YC++ + EA+G L G ++ N
Sbjct: 294 CNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V + ++ C EA E +E + D V YN A+SK V A L
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSK-LGRVEEAFELLQ 412
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+MK + I YT+LI C V A + EMI +G P L+TYN L+
Sbjct: 413 EMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNG 472
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFC---KYGELEKAF--------EMRAEMV- 294
++ + I+ M G P+AV + +I C K E E F E +A V
Sbjct: 473 HEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVK 532
Query: 295 ---ERGILPNA-------------DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
E G+ A Y KL LC + L +A D+ ++M + P
Sbjct: 533 GYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRS 592
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEE 398
++GA+C + +A L D M+ +G +PD L TY +I+ C L +++
Sbjct: 593 MCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD--------LFTYTIMIHTYCRLNELQK 644
Query: 399 ALGILRGMAEMSLSPDDVSYNIVISGFCKL-----------GELG--KAFELMVEMDEAG 445
A + M + + PD V+Y +++ + KL GE+G KA E++ E AG
Sbjct: 645 AESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAG 704
Query: 446 GIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIM 505
G+D+ V Y +I+ C + +A L D M G V Y
Sbjct: 705 --IGLDV-------------VCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 506 LFDGFDKKA 514
L + +K
Sbjct: 750 LISSYFRKG 758
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 157/346 (45%), Gaps = 33/346 (9%)
Query: 50 VSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
+ EM +G+ P + L+ C Q + +A ++ EM+ +G P + TYNVL+ R
Sbjct: 411 LQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 470
Query: 108 DKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPD--- 161
+ +E + I M E PN V+ + +I+GLC R++KEAE+ + K P+
Sbjct: 471 NGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--CPENKA 528
Query: 162 SVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVF 220
S +SK Y + P+ + Y L LC ++KA+ V
Sbjct: 529 SFVKGYCEAGLSKKA---------YKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVL 579
Query: 221 TEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKY 280
+M A EP ++I A+C + V++A +F M +RGL PD +I +C+
Sbjct: 580 KKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRL 639
Query: 281 GELEKAFEMRAEMVERGILPNADTYSKLID---CLCPQRRLS----------EAFDLFRE 327
EL+KA + +M +RGI P+ TY+ L+D L P+ + +A ++ RE
Sbjct: 640 NELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLRE 699
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
G+ Y L+ C + +A L D MI G PD V
Sbjct: 700 FSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 134/577 (23%), Positives = 241/577 (41%), Gaps = 44/577 (7%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKR 141
+ ++ G + TY +++ A CR ++EA +L +V + T I+GLC
Sbjct: 203 LFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL---IENESVFGYKTFINGLCVTG 259
Query: 142 RIKEAEELLQEM-NSKGLAPDSVTYNTLITAMSKNTNLVIRAI-ALYDQMKQQRIPVPWT 199
++A L+ E+ + K LA D + + + ++A ++ +M++ +
Sbjct: 260 ETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVY 319
Query: 200 TYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
++I C N+ +A +M+ G + + V + ++ YC D +A+ F+
Sbjct: 320 ACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEF 379
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRL 318
D + D V N K G +E+AFE+ EM +RGI+P+ Y+ LID C Q ++
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 319 SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSP 378
+A DL EM+G G+SP Y LV G + + + M +G P P
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEG--P------KP 491
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
+ VT + +I G C +V+EA + E + S+ + G+C+ G KA++
Sbjct: 492 NAVTNSVIIEGLCFARKVKEAEDFFSSL-EQKCPENKASF---VKGYCEAGLSKKAYKAF 547
Query: 439 VEMDEAGGIRGVDLAVFSSL-MKGLSDEVN-----------------YNSVINAYCAEGE 480
V + E + V + +F SL ++G ++ + +I A+C
Sbjct: 548 VRL-EYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNN 606
Query: 481 VSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYD 540
V +A +L D M G + Y ++ + + + A ESL TY
Sbjct: 607 VREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKA-ESLFEDMKQRGIKPDVVTYT 665
Query: 541 TLIENC--SNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCR 598
L++ + E + G K +A+ VL D Y LI C+
Sbjct: 666 VLLDRYLKLDPEHHETCSVQGEVG----KRKASEVLREFSAAGIGLDVVCYTVLIDRQCK 721
Query: 599 RRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVG 635
N+++A ++ M+ G M + LI + F G
Sbjct: 722 MNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKG 758
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 18/223 (8%)
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
+ Y L + C + +++A +L+ M+ VEP +I C ++EA+ L
Sbjct: 557 SVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDT 616
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI------- 205
M +GL PD TY +I + N + +A +L++ MKQ+ I TYT L+
Sbjct: 617 MVERGLIPDLFTYTIMIHTYCR-LNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD 675
Query: 206 ---HLLCTYNVD----KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
H C+ + KA +V E A+G +V Y LI C + ++ A +F M
Sbjct: 676 PEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRM 735
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
D GL PD V TLI+ + + G ++ A + E+ ++ +P+
Sbjct: 736 IDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPS 778
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 117/555 (21%), Positives = 201/555 (36%), Gaps = 138/555 (24%)
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVD-KAYKVFTEMIAS 226
L+ + + NL A++ Q+K+ + Y +L+ +L T+ +D K V E+I +
Sbjct: 62 LLNSTRDDPNL---ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKN 118
Query: 227 ---GF----------------EPSLV---TYNELIHAYCCRDRVQDAMGIFRGMPDRGLT 264
GF + S V L+ AY +A +
Sbjct: 119 EERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCV 178
Query: 265 PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
D CN L+ ++G++ + ++ + G+ N TY+ ++ LC + L EA L
Sbjct: 179 VDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML 238
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP-------------D 371
E + + Y + C+ GE KA L E+I + +L
Sbjct: 239 LIE------NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRG 292
Query: 372 FVTE-----------------FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
F E F + A+I C + EALG L M L +
Sbjct: 293 FCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVN 352
Query: 415 DVSYNIVISGFC-----------------------------------KLGELGKAFELMV 439
V ++++ +C KLG + +AFEL+
Sbjct: 353 CVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQ 412
Query: 440 EMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRA 499
EM + RG+ + D +NY ++I+ YC +G+V AL L DEM +G
Sbjct: 413 EMKD----RGI-----------VPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPD 457
Query: 500 SVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP---TFTYDTLIENC-------SNN 549
+ Y +L G + G +E +L ++ + P T +IE
Sbjct: 458 LITYNVLVSGLARN----GHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAE 513
Query: 550 EFKSVVE---------LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRR 600
+F S +E KG+ GL +A ++ Y +VY L C
Sbjct: 514 DFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAF---VRLEYPLRKSVYIKLFFSLCIEG 570
Query: 601 NVDKAYNMYMEMVHY 615
++KA+++ +M Y
Sbjct: 571 YLEKAHDVLKKMSAY 585
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 183/406 (45%), Gaps = 51/406 (12%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A+ + + ++ G PS+ TY L+ A R K + ++ + ++P+ + FN +I+
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
+ +A ++ ++M G P + T+NTLI K L + L D M + +
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLE-ESSRLLDMMLRDEML 456
Query: 196 VPWT-TYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNEL--------------- 238
P T L+ C +++A+ + +M + G +P +VT+N L
Sbjct: 457 QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAED 516
Query: 239 ---------------------IHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFF 277
++ YC ++++A+ F M + G+ P+ + N+LI F
Sbjct: 517 MIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGF 576
Query: 278 CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
+++ E+ M E G+ P+ T+S L++ + +++ +ML GG+ P
Sbjct: 577 LNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDI 636
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+A+ L Y GE KA + ++M G P++V Y +I G C G ++
Sbjct: 637 HAFSILAKGYARAGEPEKAEQILNQMRKFG--------VRPNVVIYTQIISGWCSAGEMK 688
Query: 398 EALGILRGMAEM-SLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
+A+ + + M + LSP+ +Y +I GF + + KA EL+ +M+
Sbjct: 689 KAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDME 734
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 192/421 (45%), Gaps = 27/421 (6%)
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
+V S +++GL + R +EA + + +G P +TY TL+TA+++ + ++L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFH-SLLSL 376
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
++++ + + ++I+ + N+D+A K+F +M SG +P+ T+N LI Y
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 245 RDRVQDAMGIFRGM-PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
+++++ + M D L P+ CN L+ +C ++E+A+ + +M G+ P+
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 304 TYSKLIDCLCPQRRLSEAFDL-FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
T++ L A D+ ML + P +V YC G+ +A
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR 556
Query: 363 MIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
M G P+L +N+LI G + ++ ++ M E + PD V+++ ++
Sbjct: 557 MKELG--------VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 423 SGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVS 482
+ + +G++ + E+ +M E GGI D+ FS L KG Y GE
Sbjct: 609 NAWSSVGDMKRCEEIYTDMLE-GGI-DPDIHAFSILAKG-------------YARAGEPE 653
Query: 483 KALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTL 542
KA + ++M G V+Y + G+ + A + +M + S TY+TL
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Query: 543 I 543
I
Sbjct: 714 I 714
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 135/271 (49%), Gaps = 7/271 (2%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR--DKRVDEAMGILRGM--AVEPN 126
C+Q + + A+ ++ +M + G P V T+N L AY R E M I R + V+PN
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPN 530
Query: 127 VVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALY 186
V + T+++G C + +++EA M G+ P+ +N+LI N N + +
Sbjct: 531 VRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL-NINDMDGVGEVV 589
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
D M++ + T+++L++ + ++ + +++T+M+ G +P + ++ L Y
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARA 649
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE-RGILPNADT 304
+ A I M G+ P+ VI +I+ +C GE++KA ++ +M G+ PN T
Sbjct: 650 GEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTT 709
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSP 335
Y LI ++ +A +L ++M G + P
Sbjct: 710 YETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 163/400 (40%), Gaps = 50/400 (12%)
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER 296
+L++ R R Q+A IF + + G P + TL+T + + +++ +
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN 383
Query: 297 GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
G+ P+ ++ +I+ L +A +F +M G P + L+ Y +G+ ++
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 357 FHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
L D M+ L P+ T N L+ C ++EEA I+ M + PD V
Sbjct: 444 SRLLDMMLRDEML-------QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYN-----SV 471
++N + + ++G A ++++ + L ++V N ++
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIP-------------------RMLHNKVKPNVRTCGTI 537
Query: 472 INAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESL-LRMFYDL 530
+N YC EG++ +AL M+ G ++ L GF G E + L + +
Sbjct: 538 VNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGV 597
Query: 531 CTSLPTFT------------------YDTLIENCSNNEFKSVVELAKGFGMRGLKNEAAS 572
+ TF+ Y ++E + + + LAKG+ G +A
Sbjct: 598 KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQ 657
Query: 573 VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
+LN + ++ +P+ +Y +I C + KA +Y +M
Sbjct: 658 ILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 114/234 (48%), Gaps = 6/234 (2%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTVIDGLC 138
++ M+++ P+V T +++ YC + +++EA+ ++ + V PN+ FN++I G
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW 198
+ E++ M G+ PD VT++TL+ A S ++ R +Y M + I
Sbjct: 578 NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK-RCEEIYTDMLEGGIDPDI 636
Query: 199 TTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRG 257
++ L +KA ++ +M G P++V Y ++I +C ++ AM +++
Sbjct: 637 HAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKK 696
Query: 258 MPD-RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
M GL+P+ TLI F + + KA E+ +M + ++P T + D
Sbjct: 697 MCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 5/264 (1%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGL 137
K+L EMV G P+ TYN L+H+Y R + EAM + M EP+ V++ T+ID
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
+ A ++ Q M GL+PD+ TY+ +I + K +L A L+ +M Q
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPA-AHRLFCEMVGQGCTPN 498
Query: 198 WTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
T+ +I L N + A K++ +M +GF+P VTY+ ++ +++A G+F
Sbjct: 499 LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFA 558
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
M + PD + L+ + K G ++KA++ M++ G+ PN T + L+
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVH 618
Query: 317 RLSEAFDLFREMLGGGLSPREYAY 340
R+SEA++L + ML GL P Y
Sbjct: 619 RMSEAYNLLQSMLALGLHPSLQTY 642
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 149/307 (48%), Gaps = 14/307 (4%)
Query: 141 RRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR-IPVPWT 199
RR K + +++ G D+ N ++ M N A+ + +K+Q
Sbjct: 305 RRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYAN----ALGFFYWLKRQPGFKHDGH 360
Query: 200 TYTSLI-HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
TYT+++ +L + K+ EM+ G +P+ VTYN LIH+Y + +++AM +F M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRL 318
+ G PD V TLI K G L+ A +M M E G+ P+ TYS +I+CL L
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 319 SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSP 378
A LF EM+G G +P + ++ + + A L +M + GF PD VT
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY--- 537
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
S+V + G+C G +EEA G+ M + PD+ Y +++ + K G + KA++
Sbjct: 538 SIVME---VLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 439 VEMDEAG 445
M +AG
Sbjct: 593 QAMLQAG 599
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 143/302 (47%), Gaps = 13/302 (4%)
Query: 90 GFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEA 146
GF TY ++ R K+ E +L M +PN V++N +I +KEA
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 147 EELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
+ +M G PD VTY TLI +K L I A+ +Y +M++ + TY+ +I+
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDI-AMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 207 LLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
L ++ A+++F EM+ G P+LVT+N +I + + A+ ++R M + G P
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
D V + ++ G LE+A + AEM + +P+ Y L+D + +A+ +
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 326 REMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNA 385
+ ML GL P +L+ + V S+A++L M+ G PSL TY
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALG--------LHPSLQTYTL 644
Query: 386 LI 387
L+
Sbjct: 645 LL 646
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 129/312 (41%), Gaps = 41/312 (13%)
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+ Y +VG +F + L DEM+ G P+ VTYN LI+ ++
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGC--------KPNTVTYNRLIHSYGRANYLK 411
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
EA+ + M E PD V+Y +I K G L A ++ M EAG
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG------------ 459
Query: 458 LMKGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKART 516
LS D Y+ +IN G + A L EM G V + ++ KAR
Sbjct: 460 ----LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI-ALHAKARN 514
Query: 517 RGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNT 576
E+ L+++ D+ + F D + + V+E+ G G EA V
Sbjct: 515 Y---ETALKLYRDMQNA--GFQPDKVT-------YSIVMEV---LGHCGFLEEAEGVFAE 559
Query: 577 VLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
+ + N+ PD VY L+ + NVDKA+ Y M+ G ++ + +L+ V R
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
Query: 637 HNEVRRVIQNVL 648
+E ++Q++L
Sbjct: 620 MSEAYNLLQSML 631
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 156/356 (43%), Gaps = 48/356 (13%)
Query: 88 NSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----PNVVSFNTVIDGLCAKRRI 143
N G P+ +N+L+ +C++ ++ A ++ M PN ++++T++D L A R
Sbjct: 189 NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRS 248
Query: 144 KEAEELLQEMNSK-GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYT 202
KEA EL ++M SK G++PD VT+N +I +
Sbjct: 249 KEAVELFEDMISKEGISPDPVTFNVMINGFCR---------------------------- 280
Query: 203 SLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG 262
V++A K+ M +G P++ Y+ L++ +C ++Q+A F + G
Sbjct: 281 -------AGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG 333
Query: 263 LTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
L D V TL+ FC+ GE ++A ++ EM + TY+ ++ L + R EA
Sbjct: 334 LKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEAL 393
Query: 323 DLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVT 382
+ + G+ + +Y ++ A C GE KA M +G P T
Sbjct: 394 QMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHH--------AT 445
Query: 383 YNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
+N L+ C G E + +L G + L P S+ V+ CK +L FEL+
Sbjct: 446 WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 138/288 (47%), Gaps = 9/288 (3%)
Query: 50 VSEMNRKGLD-PARESLIHLLCC--DQLQNDNAYKVLSEMVNS-GFLPSVATYNVLLHAY 105
V EM R G+ P + L+ C ++ A ++ +M++ G P T+NV+++ +
Sbjct: 219 VEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGF 278
Query: 106 CRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDS 162
CR V+ A IL M PNV +++ +++G C +I+EA++ E+ GL D+
Sbjct: 279 CRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDT 338
Query: 163 VTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFT 221
V Y TL+ +N A+ L +MK R TY ++ L + ++A ++
Sbjct: 339 VGYTTLMNCFCRNGE-TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYG 281
+ + G + +Y +++A CC ++ A+ M +RG+ P N L+ C+ G
Sbjct: 398 QWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESG 457
Query: 282 ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
E + + G++P ++ +++ +C +R+L F+L ++
Sbjct: 458 YTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 158/366 (43%), Gaps = 21/366 (5%)
Query: 90 GFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
GF + ATY+VLL R K+ IL M E + ++ + R +++
Sbjct: 84 GFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKV 143
Query: 150 LQEMN--------SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
++ N L S N LI + N + R + LY + P
Sbjct: 144 MEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLS---RKLLLYAKHNLGLQPNTCIFN 200
Query: 202 TSLIHLLCTYNVDKAYKVFTEMIASGFE-PSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
+ H +++ A+ V EM SG P+ +TY+ L+ R ++A+ +F M
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 261 R-GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
+ G++PD V N +I FC+ GE+E+A ++ M + G PN YS L++ C ++
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
EA F E+ GL Y L+ +C GE +A L EM +
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK--------ASRCRAD 372
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
+TYN ++ G GR EEAL +L + + SY I+++ C GEL KA + +
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 440 EMDEAG 445
M E G
Sbjct: 433 VMSERG 438
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 184/448 (41%), Gaps = 80/448 (17%)
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV- 213
KG ++ TY+ L+ + ++ + A+ QMK + + + +L+ ++
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKF-LAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLH 140
Query: 214 DKAYKVFTEM-IASGFEPSLVTYNELIHAYCCRDRVQDAMGIF-RGMPDRGLTPDAVICN 271
DK ++F + + + +PSL + ++ V + + + GL P+ I N
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFN 200
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGI-LPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
L+ CK G++ AF + EM GI PN+ TYS L+DCL R EA +LF +M+
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
SP VT+N +I G
Sbjct: 261 K------------------------------------------EGISPDPVTFNVMINGF 278
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGV 450
C G VE A IL M + +P+ +Y+ +++GFCK+G++ +A + E+ + G
Sbjct: 279 CRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTG----- 333
Query: 451 DLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGF 510
L + D V Y +++N +C GE +A+ L EM+ ++ Y ++ G
Sbjct: 334 -LKL---------DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGL 383
Query: 511 DKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLKNE 569
+ R+ A + +L + L +Y ++ C N E + V+ RG+
Sbjct: 384 SSEGRSEEALQ-MLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI--- 439
Query: 570 AASVLNTVLQWNYKPDGAVYNFLIVEHC 597
W P A +N L+V C
Sbjct: 440 ----------W---PHHATWNELVVRLC 454
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 170/430 (39%), Gaps = 59/430 (13%)
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
++G N TYS L+D L ++ + +M +E + NL+ FS
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR------HFS 135
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALG---ILRGMAEMSL 411
++ L D+++ L + PSL + + N L+ E L +L + L
Sbjct: 136 RS-DLHDKVMEMFNLIQVIARVKPSLNAISTCL--NLLIDSGEVNLSRKLLLYAKHNLGL 192
Query: 412 SPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLM------------ 459
P+ +NI++ CK G++ AF L+VE + GI + +S+LM
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAF-LVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 460 ----------KGLS-DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFD 508
+G+S D V +N +IN +C GEV +A + D M+ +G Y L +
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 509 GFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFG----- 562
GF K + + AK++ + L T Y TL+ C N E ++L
Sbjct: 312 GFCKVGKIQEAKQTFDEV-KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 563 ---------MRGLKNEAAS--VLNTVLQWNYKP---DGAVYNFLIVEHCRRRNVDKAYNM 608
+RGL +E S L + QW + + Y ++ C ++KA
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 609 YMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFELHKALSETGVI 668
M G H + L+ L G RV+ LR I G + A+ E+ I
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVES--I 488
Query: 669 VREDKVKDVL 678
+E K+ V
Sbjct: 489 CKERKLVHVF 498
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 180/432 (41%), Gaps = 39/432 (9%)
Query: 88 NSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM--AVEPNVVSFNTVID-----GLCAK 140
+ GF + TY+ +L R + D ++ + + P N ID GL
Sbjct: 76 HPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAG- 134
Query: 141 RRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT 200
R + + + + G+ + NTL+ + +N + + + I T
Sbjct: 135 -RYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193
Query: 201 YTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
L+ LC N ++ AYKV E+ + G P+LVTY ++ Y R ++ A + M
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
DRG PDA L+ +CK G +A + +M + I PN TY +I LC +++
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD-------- 371
EA ++F EML P ++ A C + +A L +M+ +PD
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
Query: 372 --------------FVTEFS----PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP 413
EF PSL+TYN LI G C G + EA + M E P
Sbjct: 374 HWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 414 DDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI--RGVDLAVFSSLMKGLSDEVNYNSV 471
+ +YN++I G K G + + ++ EM E G + L +F L K L E + +
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK-LGKEEDAMKI 492
Query: 472 INAYCAEGEVSK 483
++ G+V K
Sbjct: 493 VSMAVMNGKVDK 504
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 149/331 (45%), Gaps = 15/331 (4%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C + ++AYKVL E+ + G +P++ TY +L Y ++ A +L M P+
Sbjct: 202 CKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDA 261
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
++ ++DG C R EA ++ +M + P+ VTY +I A+ K A ++D
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK-SGEARNMFD 320
Query: 188 QMKQQRIPVPWTTYTSLIHLLCT-YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M ++ + +I LC + VD+A ++ +M+ + P + LIH C
Sbjct: 321 EMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
RV +A +F ++G P + NTLI C+ GEL +A + +M ER PNA TY+
Sbjct: 381 RVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYN 439
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
LI+ L + E + EML G P + + L +G+ A + +
Sbjct: 440 VLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMN 499
Query: 367 G---------FLPDFVTEFSPSLVTYNALIY 388
G FL F E ++ L++
Sbjct: 500 GKVDKESWELFLKKFAGELDKGVLPLKELLH 530
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 173/411 (42%), Gaps = 45/411 (10%)
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER 296
+L+ Y R + +M IF +PD G+ NTL+ + + M E
Sbjct: 125 DLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKES 184
Query: 297 -GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSK 355
GI PN T + L+ LC + + A+ + E+ GL P Y ++G Y G+
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 356 AFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDD 415
A + +EM+ +G+ PD TY L+ G C LGR EA ++ M + + P++
Sbjct: 245 AKRVLEEMLDRGWYPD--------ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296
Query: 416 VSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAY 475
V+Y ++I CK + G+A + EM E + L VI+A
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC---------------KVIDAL 341
Query: 476 CAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCT-SL 534
C + +V +A L +M + + + L L K+ R A+ ++F + S+
Sbjct: 342 CEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR----KLFDEFEKGSI 397
Query: 535 PTF-TYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLI 593
P+ TY+TLI G +G EA + + + + KP+ YN LI
Sbjct: 398 PSLLTYNTLI---------------AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLI 442
Query: 594 VEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVI 644
+ NV + + EM+ G + + L L + L +G+ + +++
Sbjct: 443 EGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 166/447 (37%), Gaps = 55/447 (12%)
Query: 212 NVDKAYKVFTEMIAS--GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
N+D A ++F S GF + TY+ ++ R R D + P
Sbjct: 61 NIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLS-RARAFDPVESLMADLRNSYPPIKCG 119
Query: 270 CNTLITFFCKYG---ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
N I YG E + + + + G+ + + + L++ L +R FDL
Sbjct: 120 ENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQR----FDLVH 175
Query: 327 EMLGG-----GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
M G++P + LV A C + A+ + DE+ G +P+ LV
Sbjct: 176 AMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPN--------LV 227
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
TY ++ G G +E A +L M + PD +Y +++ G+CKLG +A +M +M
Sbjct: 228 TYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDM 287
Query: 442 DEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASV 501
E I +EV Y +I A C E + +A + DEM + S
Sbjct: 288 -EKNEIE--------------PNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSS 332
Query: 502 LYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGF 561
L + D + + A +M + C + C +L F
Sbjct: 333 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 562 GMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHM 621
E S+ P YN LI C + + +A ++ +M +
Sbjct: 393 -------EKGSI----------PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNA 435
Query: 622 FSVLALIKALFHVGRHNEVRRVIQNVL 648
F+ LI+ L G E RV++ +L
Sbjct: 436 FTYNVLIEGLSKNGNVKEGVRVLEEML 462
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 150/597 (25%), Positives = 231/597 (38%), Gaps = 105/597 (17%)
Query: 96 ATYNVLLHAYCRDKR-VDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQ 151
A + +H+ C +R DEA+ IL G+ + P+ ++ ++VI LC R EA
Sbjct: 55 AYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFL 114
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY 211
+ G PD T N +I + LY R PV + +IH L +
Sbjct: 115 LFLASGFIPDERTCNVIIARL------------LY-----SRSPV---STLGVIHRLIGF 154
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
+ F PSL YN L++ C RV DA + M +RG PD V
Sbjct: 155 KKE-------------FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFT 201
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML-- 329
TLI +C+ ELE A ++ EM GI PN+ T S LI R + L +E+
Sbjct: 202 TLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEY 261
Query: 330 ---GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM---------IHKGFLPDFVTEF- 376
S + A+ NLV + C G F+ F + + M G + D + +
Sbjct: 262 MKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYR 321
Query: 377 -----------------SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
P +YNA+I+G C G A +L +E P + +Y
Sbjct: 322 RNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYK 381
Query: 420 IVISGFCKLGELGKA---FELMVEMDEAGGIRGVD---------------LAVFSSLMKG 461
+++ CK + GKA ELM+ + A R + L V S+++G
Sbjct: 382 LLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQG 441
Query: 462 --LSDEVNYNSVINAYCAEGEVSKAL-ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRG 518
DE N+VIN C G V A+ +L D M +V + G + R
Sbjct: 442 DCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEE 501
Query: 519 AKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVL 578
A + L R+ + Y+ +I + + +L KG +EA SV +
Sbjct: 502 ALDVLNRVMPENKIKPGVVAYNAVI--------RGLFKLHKG-------DEAMSVFGQLE 546
Query: 579 QWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVG 635
+ + D Y +I C VD A + +++ F A +K L G
Sbjct: 547 KASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSG 603
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/535 (22%), Positives = 210/535 (39%), Gaps = 69/535 (12%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTVI 134
+A+K++ +M N G LP V T+ L+ YC + ++ A + +R + PN ++ + +I
Sbjct: 180 DAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239
Query: 135 DGLCAKRRIKEAEELLQEM-----NSKGLAPDSVTYNTLITAMSKNTNL-----VIRAIA 184
G R ++ +L++E+ N + + + L+ +M + + ++
Sbjct: 240 GGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMS 299
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYNVDK-AYKVFTEMIASGFEPSLVTYNELIHAYC 243
L + + + Y +I LC Y + A ++ M + G +P +YN +IH C
Sbjct: 300 LCESVNVE------FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLC 353
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
A + + P L+ CK + KA + M+ +
Sbjct: 354 KDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTR 413
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
Y+ + LC +E ++ ML G P EY ++ C +G A + D+M
Sbjct: 414 IYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDM 473
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGIL-RGMAEMSLSPDDVSYNIVI 422
+ F +P VT N ++ G GR EEAL +L R M E + P V+YN VI
Sbjct: 474 MTGKFC-------APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVI 526
Query: 423 SGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG--LSDEVNYNSVINAYCAEGE 480
G KL + DEA ++VF L K +D Y +I+ C +
Sbjct: 527 RGLFKLH----------KGDEA-------MSVFGQLEKASVTADSTTYAIIIDGLCVTNK 569
Query: 481 VSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS--LPTFT 538
V A D++ + +Y G + G YDL S +P
Sbjct: 570 VDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQS----GYLSDACHFLYDLADSGAIPNVV 625
Query: 539 -YDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFL 592
Y+T+I CS + GLK EA +L + + PD + L
Sbjct: 626 CYNTVIAECSRS---------------GLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/510 (22%), Positives = 200/510 (39%), Gaps = 96/510 (18%)
Query: 91 FLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAE 147
F+PS+ YN L++ C RV +A + +R P+VV+F T+I G C R ++ A
Sbjct: 158 FVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAH 217
Query: 148 ELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI-RAI--ALYDQMKQQR-IPVPWTTYTS 203
++ EM G+ P+S+T + LI K ++ R + L++ MK + + + +
Sbjct: 218 KVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFAN 277
Query: 204 LIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG 262
L+ +C + +++ M Y +I + C R A I M +G
Sbjct: 278 LVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKG 337
Query: 263 LTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ------- 315
L P N +I CK G +A+++ E E P+ TY L++ LC +
Sbjct: 338 LKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKAR 397
Query: 316 ----------------------RRL------SEAFDLFREMLGGGLSPREYAYFNLVGAY 347
R L +E ++ ML G P EY ++
Sbjct: 398 NVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
Query: 348 CLVGEFSKAFHLRDEMIHKGFL-PDFVT----------------------------EFSP 378
C +G A + D+M+ F PD VT + P
Sbjct: 458 CKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKP 517
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
+V YNA+I G L + +EA+ + + + S++ D +Y I+I G C ++ A +
Sbjct: 518 GVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFW 577
Query: 439 VEMDEAGGIRGVDLAVFSSLMKGLSDE----------------------VNYNSVINAYC 476
++ G D V+++ +KGL V YN+VI
Sbjct: 578 DDVIWPSGRH--DAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECS 635
Query: 477 AEGEVSKALILHDEMEHHGSLRASVLYIML 506
G +A + +EM +G +V + +L
Sbjct: 636 RSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 140/302 (46%), Gaps = 19/302 (6%)
Query: 31 LESEPKKVTSGGLLKTTTTVSEMNRK-GLDPARESLIHLLCCDQLQNDNA-YKVLSEMVN 88
+ES K++ +G K + M RK G D R I+L + N VL M+
Sbjct: 384 MESLCKELDTG---KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQ 440
Query: 89 SGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV----EPNVVSFNTVIDGLCAKRRIK 144
P T N +++ C+ RVD+AM +L M P+ V+ NTV+ GL A+ R +
Sbjct: 441 GDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAE 500
Query: 145 EAEELLQE-MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTS 203
EA ++L M + P V YN +I + K + A++++ Q+++ + TTY
Sbjct: 501 EALDVLNRVMPENKIKPGVVAYNAVIRGLFK-LHKGDEAMSVFGQLEKASVTADSTTYAI 559
Query: 204 LIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG 262
+I LC N VD A K + ++I Y + C + DA + D G
Sbjct: 560 IIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSG 619
Query: 263 LTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
P+ V NT+I + G +A+++ EM + G P+A T+ +++D +L ++
Sbjct: 620 AIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW-RILD------KLHDSM 672
Query: 323 DL 324
DL
Sbjct: 673 DL 674
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 136/331 (41%), Gaps = 11/331 (3%)
Query: 53 MNRKGLDPARES---LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
M KGL P R S +IH LC D AY++L E F PS TY +L+ + C++
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDG-GCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKEL 391
Query: 110 RVDEAMGILRGMAVEPNVVS---FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
+A +L M + +N + GLC E +L M PD T N
Sbjct: 392 DTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN 451
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVP--WTTYTSLIHLLCTYNVDKAYKVFTE-M 223
T+I + K V A+ + D M + P T T + LL ++A V M
Sbjct: 452 TVINGLCK-MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Query: 224 IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGEL 283
+ +P +V YN +I + +AM +F + +T D+ +I C ++
Sbjct: 511 PENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNL 343
+ A + +++ +A Y+ + LC LS+A ++ G P Y +
Sbjct: 571 DMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTV 630
Query: 344 VGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
+ G +A+ + +EM G PD VT
Sbjct: 631 IAECSRSGLKREAYQILEEMRKNGQAPDAVT 661
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 149/389 (38%), Gaps = 53/389 (13%)
Query: 289 MRAEMVERGILPNADTYSKLIDCLCPQRR-LSEAFDLFREMLGGGLSPREYAYFNLVGAY 347
+ AE R + A + + I +C RR EA + + G P +++ +
Sbjct: 42 IEAEDRRRSVTDRA-YWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSL 100
Query: 348 CLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE-EALGILRGM 406
C G F +A H+ FL + F P T N +I L R LG++ +
Sbjct: 101 CDAGRFDEA--------HRRFLLFLASGFIPDERTCNVII-ARLLYSRSPVSTLGVIHRL 151
Query: 407 A--EMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSD 464
+ P +YN +++ C + + A +L+ +M G L D
Sbjct: 152 IGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGH---------------LPD 196
Query: 465 EVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGF----DKKARTRGAK 520
V + ++I YC E+ A + DEM G S+ +L GF D + + K
Sbjct: 197 VVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMK 256
Query: 521 ESLLRMFYDLCTSLPTFTYDTLIEN-CSNNEFKSVVELAKGFGM---------------- 563
E M + TS+ + L+++ C F + E+A+ +
Sbjct: 257 ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDS 316
Query: 564 --RGLKNEAASVLNTVLQWN-YKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASH 620
R +N A+ + +++ KP YN +I C+ +AY + E + F
Sbjct: 317 LCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPS 376
Query: 621 MFSVLALIKALFHVGRHNEVRRVIQNVLR 649
++ L+++L + R V++ +LR
Sbjct: 377 EYTYKLLMESLCKELDTGKARNVLELMLR 405
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 196/432 (45%), Gaps = 56/432 (12%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYC---RDKRVDEAMGIL---RGMAVEPNVVSF 130
++A + L +M G P+ +TYN L+ Y + +R E + ++ + V PN+ +F
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
N ++ C K++++EA E++++M G+ PD+VTYNT+ T + V + ++M
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKM- 250
Query: 191 QQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
++ +P+ T ++ YC RV+D
Sbjct: 251 --------------------------------VMKEKAKPNGRTCGIVVGGYCREGRVRD 278
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
+ R M + + + V+ N+LI F + + + E+ M E + + TYS +++
Sbjct: 279 GLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMN 338
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP 370
+ +A +F+EM+ G+ P +AY L Y E KA L L
Sbjct: 339 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL---------LE 389
Query: 371 DFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGE 430
+ E P++V + +I G C G +++A+ + M + +SP+ ++ ++ G+ ++ +
Sbjct: 390 TLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQ 449
Query: 431 LGKAFELMVEMDEAGGIRGVD----LAVFSSLMKGLSDEVNYNSVINAY-CAEGEVSKAL 485
KA E++ +M G++ + L + + GL+DE N INA C + E++K
Sbjct: 450 PWKAEEVL-QMMRGCGVKPENSTFLLLAEAWRVAGLTDE--SNKAINALKCKDIEIAKLE 506
Query: 486 ILHDEMEHHGSL 497
L+ + S
Sbjct: 507 KLYQKQSSGSSF 518
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 124/542 (22%), Positives = 234/542 (43%), Gaps = 85/542 (15%)
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
V S +++ L + R EA+ + + + G P ++Y TL+ AM+
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMT------------ 91
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
+++Q Y S+ ++ +E+ SG + + +N +I+A+
Sbjct: 92 ---VQKQ--------YGSISSIV------------SEVEQSGTKLDSIFFNAVINAFSES 128
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG---ILPNA 302
++DA+ M + GL P NTLI + G+ E++ E+ M+E G + PN
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
T++ L+ C ++++ EA+++ ++M G+ P Y + Y GE +A E
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA---ESE 245
Query: 363 MIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
++ K + + + P+ T ++ G C GRV + L +R M EM + + V +N +I
Sbjct: 246 VVEKMVMKE---KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 423 SGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL---SDEVNYNSVINAYCAEG 479
+GF ++ MD G+D + +LMK +D + Y++V+NA+ + G
Sbjct: 303 NGFVEV------------MDR----DGIDEVL--TLMKECNVKADVITYSTVMNAWSSAG 344
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTY 539
+ KA + EM G + Y +L G+ + + A+E L + + ++ FT
Sbjct: 345 YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFT- 403
Query: 540 DTLIEN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCR 598
T+I CSN G ++A V N + ++ P+ + L+ +
Sbjct: 404 -TVISGWCSN----------------GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 446
Query: 599 RRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFEL 658
+ KA + M G + L L +A G +E + I N L+ +I +L
Sbjct: 447 VKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAI-NALKCKDIEIAKL 505
Query: 659 HK 660
K
Sbjct: 506 EK 507
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 157/317 (49%), Gaps = 10/317 (3%)
Query: 36 KKVTSGGLLKTTTTV-SEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFL 92
++ S ++K V EM + G +P LL C +A K+ +M F
Sbjct: 191 QRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFP 249
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
++ + LL+ +CR ++ EA +L M EP++V + ++ G ++ +A +L
Sbjct: 250 VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL 309
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
L++M +G P++ Y LI A+ K + + A+ ++ +M++ TYT+L+ C
Sbjct: 310 LRDMRRRGFEPNANCYTVLIQALCK-VDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Query: 210 TY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
+ +DK Y V +MI G PS +TY ++ A+ ++ ++ + + M PD
Sbjct: 369 KWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIG 428
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
I N +I CK GE+++A + EM E G+ P DT+ +I+ L Q L EA D F+EM
Sbjct: 429 IYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM 488
Query: 329 LGGGL-SPREYAYFNLV 344
+ GL S +Y L+
Sbjct: 489 VTRGLFSVSQYGTLKLL 505
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 134/318 (42%), Gaps = 41/318 (12%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE--PNVVSFNTVID 135
A +VL EM GF P + LL A C+ V +A + M + N+ F +++
Sbjct: 201 KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLY 260
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
G C ++ EA+ +L +MN G PD V Y L++ + +
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA---------------- 304
Query: 196 VPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
AY + +M GFEP+ Y LI A C DR+++AM +F
Sbjct: 305 -------------------DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVF 345
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
M D V L++ FCK+G+++K + + +M+++G++P+ TY ++ +
Sbjct: 346 VEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKK 405
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE 375
E +L +M P Y ++ C +GE +A L +EM G P T
Sbjct: 406 ESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDT- 464
Query: 376 FSPSLVTYNALIYGNCLL 393
++ N L CLL
Sbjct: 465 ---FVIMINGLASQGCLL 479
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 146/365 (40%), Gaps = 77/365 (21%)
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
L+ F ++KA E+ EM + G P+ + L+D LC + +A LF +M
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR 247
Query: 332 GLSPREYAYF-NLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
P YF +L+ +C VG+ +A ++ +M GF PD +V Y L+ G
Sbjct: 248 --FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPD--------IVDYTNLLSGY 297
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGV 450
G++ +A +LR M P+ Y ++I CK+ + +A ++ VEM+
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER------- 350
Query: 451 DLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGF 510
+ +D V Y ++++ +C G++ K I+ D+M G + + + Y+ +
Sbjct: 351 --------YECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAH 402
Query: 511 DKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEA 570
+KK F+ +EL
Sbjct: 403 EKK-----------------------------------ESFEECLEL------------- 414
Query: 571 ASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKA 630
+ + Q Y PD +YN +I C+ V +A ++ EM G + + + + +I
Sbjct: 415 ---MEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471
Query: 631 LFHVG 635
L G
Sbjct: 472 LASQG 476
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 128/255 (50%), Gaps = 6/255 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR----GMAVEPNVVSFNT 132
++A+K+ EM +V ++N LL AY K++DEAM + + + P++V++NT
Sbjct: 139 EHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNT 198
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+I LC K + + + +E+ G PD +++NTL+ + L + ++D MK +
Sbjct: 199 MIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRR-ELFVEGDRIWDLMKSK 257
Query: 193 RIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+ +Y S + L A + M G P + TYN LI AY + +++
Sbjct: 258 NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEV 317
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
M + M ++GLTPD V LI CK G+L++A E+ E ++ +L + Y +++
Sbjct: 318 MKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVER 377
Query: 312 LCPQRRLSEAFDLFR 326
L ++ EA L +
Sbjct: 378 LMGAGKIDEATQLVK 392
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 120/239 (50%), Gaps = 11/239 (4%)
Query: 205 IHLLCTYN--VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR- 261
I LL Y+ + A+K+F EM E ++ ++N L+ AY ++ +AM F+ +P++
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
G+TPD V NT+I C+ G ++ + E+ + G P+ +++ L++ + E
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 322 FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
++ M LSP +Y + V +F+ A +L D M +G PD +
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD--------VH 299
Query: 382 TYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
TYNALI + +EE + M E L+PD V+Y ++I CK G+L +A E+ E
Sbjct: 300 TYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 112/238 (47%), Gaps = 3/238 (1%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK-GLAPDSVTYNTLITAMSKNTNLVIRA 182
E V SFN ++ +++ EA + +E+ K G+ PD VTYNT+I A+ + ++
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM-DDI 212
Query: 183 IALYDQMKQQRIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHA 241
+++++++++ ++ +L+ + + +++ M + P++ +YN +
Sbjct: 213 LSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRG 272
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
+ DA+ + M G++PD N LIT + LE+ + EM E+G+ P+
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
TY LI LC + L A ++ E + L R Y +V G+ +A L
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 26/258 (10%)
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER-GILPNADTYS 306
+ A +F MP+ N L++ + +L++A + E+ E+ GI P+ TY+
Sbjct: 138 AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYN 197
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
+I LC + + + +F E+ G P ++ L+ + F + + D M K
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 257
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
SP++ +YN+ + G + +AL ++ M +SPD +YN +I+ +
Sbjct: 258 NL--------SPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYR 309
Query: 427 KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVSKAL 485
L + + EM E KGL+ D V Y +I C +G++ +A+
Sbjct: 310 VDNNLEEVMKCYNEMKE----------------KGLTPDTVTYCMLIPLLCKKGDLDRAV 353
Query: 486 ILHDEMEHHGSLRASVLY 503
+ +E H L +Y
Sbjct: 354 EVSEEAIKHKLLSRPNMY 371
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 26/228 (11%)
Query: 281 GELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG-GLSPREYA 339
G E A ++ EM E +++ L+ ++L EA F+E+ G++P
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEA 399
Y ++ A C G + +E+ GF P L+++N L+ E
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGF--------EPDLISFNTLLEEFYRRELFVEG 247
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLM 459
I M +LSP+ SYN + G + + A L+ M
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMK----------------T 291
Query: 460 KGLSDEVN-YNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIML 506
+G+S +V+ YN++I AY + + + + ++EM+ G +V Y ML
Sbjct: 292 EGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCML 339
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 158/329 (48%), Gaps = 12/329 (3%)
Query: 52 EMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
+M+ KG+ +++ L+ CD+ + A + +EM G + YN L+ AY +
Sbjct: 334 KMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSN 393
Query: 110 RVDEAMGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
++E G+ +R ++P+ ++N ++D + + E LL+EM GL P+ +Y
Sbjct: 394 HIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV----DKAYKVFTE 222
LI+A + + A + +MK+ + +YT+LIH Y+V +KAY F E
Sbjct: 454 CLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH---AYSVSGWHEKAYASFEE 510
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
M G +PS+ TY ++ A+ M I++ M + + NTL+ F K G
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
+A ++ +E + G+ P+ TY+ L++ + ++ L +EM L P Y
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYST 630
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
++ A+ V +F +AF M+ G +PD
Sbjct: 631 MIYAFVRVRDFKRAFFYHKMMVKSGQVPD 659
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 183/425 (43%), Gaps = 70/425 (16%)
Query: 93 PSVATY---NVLLHAYCRDKRVDEAMGILRGMAVEP---NVVSFNTVIDGLCAKRRIKEA 146
PS+A+ +VL R++ D + +L + + +V +N I GL A +R +A
Sbjct: 233 PSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDA 292
Query: 147 EELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
E+ + M+ + PD+VT LIT + K ++++M ++ + + L+
Sbjct: 293 WEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVK 352
Query: 207 LLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
C + ++A + TEM G + + YN L+ AY + +++ G+F M D+GL P
Sbjct: 353 SFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKP 412
Query: 266 DAVICNTLITFFCK--------------------------------YGELEKAFEMRAE- 292
A N L+ + + YG +K +M A+
Sbjct: 413 SAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADA 472
Query: 293 ---MVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL 349
M + G+ P++ +Y+ LI +A+ F EM G+ P Y +++ A+
Sbjct: 473 FLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRR 532
Query: 350 VGEFSKAFHLRDEMIHK--------------GFLP--------DFVTEFS-----PSLVT 382
G+ K + M+ + GF D V+EFS PS++T
Sbjct: 533 SGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMT 592
Query: 383 YNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
YN L+ G+ + +L+ MA ++L PD ++Y+ +I F ++ + +AF M
Sbjct: 593 YNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMV 652
Query: 443 EAGGI 447
++G +
Sbjct: 653 KSGQV 657
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 141/344 (40%), Gaps = 14/344 (4%)
Query: 80 YKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDG 136
+++ +M G S + L+ ++C + +EA+ I M + N + +NT++D
Sbjct: 329 WEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
I+E E L EM KGL P + TYN L+ A ++ I L +M+ +
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDI-VETLLREMEDLGLEP 447
Query: 197 PWTTYTSLIHLLCTYN--VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
+YT LI D A F M G +PS +Y LIHAY + A
Sbjct: 448 NVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F M G+ P +++ F + G+ K E+ M+ I TY+ L+D
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAK 567
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
Q EA D+ E GL P Y L+ AY G+ +K L EM PD
Sbjct: 568 QGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPD--- 624
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
+TY+ +IY + + A + M + PD SY
Sbjct: 625 -----SITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 134/302 (44%), Gaps = 47/302 (15%)
Query: 51 SEMNRKGLDPARESLIHLLCCDQLQNDNAYK----VLSEMVNSGFLPSVATYNVLLHAYC 106
+EM +KG+ ++++ D N + + +EM + G PS ATYN+L+ AY
Sbjct: 368 TEMEKKGI--RSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
Query: 107 RDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKE-AEELLQEMNSKGLAPDS 162
R + D +LR M +EPNV S+ +I +++ + A + M GL P S
Sbjct: 426 RRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSS 485
Query: 163 VTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL-------------- 208
+Y LI A S + +A A +++M ++ I TYTS++
Sbjct: 486 HSYTALIHAYSV-SGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWK 544
Query: 209 -----------CTYNV-----------DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
TYN +A V +E G +PS++TYN L++AY
Sbjct: 545 LMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGG 604
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ + + M L PD++ +T+I F + + ++AF MV+ G +P+ +Y
Sbjct: 605 QDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYE 664
Query: 307 KL 308
KL
Sbjct: 665 KL 666
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 172/455 (37%), Gaps = 48/455 (10%)
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK-AFEMRAEM 293
YN I R DA ++ M + PD V C LIT K G K +E+ +M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 294 VERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEF 353
E+G+ + D + L+ C + EA + EM G+ Y L+ AY
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 354 SKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI--YGNCLLGRVEEALGILRGMAEMSL 411
+ L EM KG PS TYN L+ Y + + E L LR M ++ L
Sbjct: 396 EEVEGLFTEMRDKGL--------KPSAATYNILMDAYARRMQPDIVETL--LREMEDLGL 445
Query: 412 SPDDVSYNIVISGFCKLGELGK-AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNS 470
P+ SY +IS + + ++ A + + M + G +K S +Y +
Sbjct: 446 EPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVG-------------LKPSSH--SYTA 490
Query: 471 VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDL 530
+I+AY G KA +EM G + Y + D F + T G + ++
Sbjct: 491 LIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDT-GKLMEIWKLMLRE 549
Query: 531 CTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYN 590
TY+TL++ GF +GL EA V++ + +P YN
Sbjct: 550 KIKGTRITYNTLLD---------------GFAKQGLYIEARDVVSEFSKMGLQPSVMTYN 594
Query: 591 FLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
L+ + R K + EM + +I A V + +++S
Sbjct: 595 MLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKS 654
Query: 651 CNI---NGFELHKALSETGVIVREDKVKDVLLNVL 682
+ +E +A+ E + K K +L ++
Sbjct: 655 GQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGII 689
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/614 (21%), Positives = 231/614 (37%), Gaps = 120/614 (19%)
Query: 53 MNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVD 112
++R LD +++ + C Q D A++++ + + TY VL+H + ++ R+D
Sbjct: 241 LSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRID 300
Query: 113 EAMGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLI 169
+A + +R M + ++ ++ +I GLC + ++ A L E+ G+ PD L+
Sbjct: 301 KAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLL 360
Query: 170 TAMSKNTNLV-IRAIALYDQMKQQ-------------RIPVPWTTYTSLIHLLCTYNVD- 214
+ S+ + L I + + D K+ R + Y+ + +L+ Y D
Sbjct: 361 CSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDG 420
Query: 215 -----KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
K K + I + + N L+ A ++V A+ + + GL P ++
Sbjct: 421 VSEIVKLLKDHNKAILPDSDSLSIVINCLVKA----NKVDMAVTLLHDIVQNGLIPGPMM 476
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
N +I CK G E++ ++ EM + G+ P+ T + + CL + A DL ++M
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS------------ 377
G P LV C G A D++ +GFL V +
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVD 596
Query: 378 ---------------PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
P ++ Y+ LI C R EA + M L P +YN +I
Sbjct: 597 RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMI 656
Query: 423 SGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVS 482
G+CK GE+ + +V M E + D + Y S+I+ CA G S
Sbjct: 657 DGWCKEGEIDRGLSCIVRMYED---------------EKNPDVITYTSLIHGLCASGRPS 701
Query: 483 KALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTL 542
+A+ +EM+ + ++ L G LC
Sbjct: 702 EAIFRWNEMKGKDCYPNRITFMALIQG--------------------LCKC--------- 732
Query: 543 IENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNV 602
G EA + + +PD AVY L+ N+
Sbjct: 733 ----------------------GWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENI 770
Query: 603 DKAYNMYMEMVHYG 616
+ + ++ EMVH G
Sbjct: 771 NAGFGIFREMVHKG 784
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 165/389 (42%), Gaps = 14/389 (3%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQN--DNAYKVLSEMVNSGFLPSVAT 97
S G+ + + + N K + P +SL ++ C N D A +L ++V +G +P
Sbjct: 418 SDGVSEIVKLLKDHN-KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMM 476
Query: 98 YNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
YN ++ C++ R +E++ +L M VEP+ + N + L + A +LL++M
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVD 214
G P L+ + +N V L D + + + ++ L+ VD
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVD 596
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
+ ++F ++ A+G P ++ Y+ LI A C R +A +F M +GL P N++I
Sbjct: 597 RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMI 656
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+CK GE+++ M E P+ TY+ LI LC R SEA + EM G
Sbjct: 657 DGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCY 716
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
P + L+ C G +A EM K E P Y +L+
Sbjct: 717 PNRITFMALIQGLCKCGWSGEALVYFREMEEK--------EMEPDSAVYLSLVSSFLSSE 768
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVIS 423
+ GI R M P V N +++
Sbjct: 769 NINAGFGIFREMVHKGRFPVSVDRNYMLA 797
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 142/616 (23%), Positives = 242/616 (39%), Gaps = 85/616 (13%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR-----GMAVEPNVVS 129
QN + ++ +++NS S + + VDEA + G+ V PN +
Sbjct: 121 QNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCV-PNAYT 179
Query: 130 FNTVIDGLCAKRR--IKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
+N +++ + ++ E L+EM G D T ++ NT RA+++++
Sbjct: 180 YNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYC-NTGKSERALSVFN 238
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
++ R + T L+ C + VDKA+++ + + TY LIH +
Sbjct: 239 EI-LSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKES 297
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
R+ A +F M G+ D + + LI CK+ +LE A + E+ GI P+
Sbjct: 298 RIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILG 357
Query: 307 KLIDCLCPQRRLSEAFD-----------------LFREMLGGGLSPREYAYF-NLVGAYC 348
KL+ + LS + LF + L Y++ NL+G Y
Sbjct: 358 KLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYE 417
Query: 349 LVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL-VTYNALIYGNCLLGRVEEALGILRGMA 407
G L+D +K LPD S SL + N L+ N +V+ A+ +L +
Sbjct: 418 SDGVSEIVKLLKDH--NKAILPD-----SDSLSIVINCLVKAN----KVDMAVTLLHDIV 466
Query: 408 EMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG---------GIRGV-----DLA 453
+ L P + YN +I G CK G ++ +L+ EM +AG I G D
Sbjct: 467 QNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFV 526
Query: 454 VFSSLMK-----GLSDEVNYNS-VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
L+K G + + + ++ C G A D++ G L V
Sbjct: 527 GALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAI 586
Query: 508 DGFDK-KARTRGAKESLLRMFYDLCTS--LP-TFTYDTLIENCSNNEFKSVVELAKGFGM 563
DG K + RG L +F D+C + P Y LI K++ + +
Sbjct: 587 DGLIKNEGVDRG-----LELFRDICANGHCPDVIAYHVLI--------KALCKACRTM-- 631
Query: 564 RGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFS 623
EA + N ++ KP A YN +I C+ +D+ + + M + +
Sbjct: 632 -----EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVIT 686
Query: 624 VLALIKALFHVGRHNE 639
+LI L GR +E
Sbjct: 687 YTSLIHGLCASGRPSE 702
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 61 ARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL 118
A LI LC C ++ D + +EMV+ G P+VATYN ++ +C++ +D + +
Sbjct: 616 AYHVLIKALCKACRTMEADILF---NEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 119 RGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN 175
M + P+V+++ ++I GLCA R EA EM K P+ +T+ LI + K
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK- 731
Query: 176 TNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVT 234
A+ + +M+++ + Y SL+ + N++ + +F EM+ G P V
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVD 791
Query: 235 YNELIHAYCCRDRVQD 250
N ++ V+D
Sbjct: 792 RNYMLAVNVTSKFVED 807
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 205/503 (40%), Gaps = 51/503 (10%)
Query: 53 MNRKGLDPARESLIHL--LCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR 110
M+ +G P+ + L + D + Y V +M GF P V YN ++ A ++
Sbjct: 184 MDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGY 243
Query: 111 VDEAMGILRGMAVEPNV---VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNT 167
D A+ + + V +F ++ GLC RI+E E+LQ M PD Y
Sbjct: 244 FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTA 303
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIAS 226
+I + NL ++ ++D+M++ I Y +L+ LC V++ Y++F EM
Sbjct: 304 MIKTLVSEGNLDA-SLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK 362
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
Y LI + +V+ A ++ + D G D I N +I C +++KA
Sbjct: 363 QILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKA 422
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM--LGGGLSPREYAYFNLV 344
+++ +E + P+ +T S ++ RLS+ ++ + LG +S +F L+
Sbjct: 423 YKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLL 482
Query: 345 GAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILR 404
A E A L I K T+ S+ YN L+ +G ++++L +
Sbjct: 483 CA----DEEKNAMALDVFYILK-------TKGHGSVSVYNILMEALYKMGDIQKSLSLFY 531
Query: 405 GMAEMSLSPDDVSYNIVISGFCKLGELGKA---FELMVEMDEAGGIRGVDLAVFSSLMKG 461
M ++ PD SY+I I F + G++ A E ++EM I A + SL KG
Sbjct: 532 EMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSI-----AAYLSLTKG 586
Query: 462 LSD-----------------------EVNYNSVINAYCAEGEVSKALILHDEMEHHGSLR 498
L E Y + C K + + DEM G
Sbjct: 587 LCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFI 646
Query: 499 ASVLYIMLFDGFDKKARTRGAKE 521
V+Y + G K + A+E
Sbjct: 647 NEVIYCAIISGMSKHGTIKVARE 669
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 182/460 (39%), Gaps = 60/460 (13%)
Query: 88 NSGFLPSVATYNVLLHAYCRDKR-----VDEAMGILRGMAVEPNVVSFNTVIDGLCAKRR 142
G+ A YN AYC ++ D+ ++ P+ F +I RR
Sbjct: 151 QKGYKHDFAAYNAF--AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRR 208
Query: 143 IKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYT 202
+ ++M G P YN ++ A+ KN + A+A+Y+ K+ + TT+
Sbjct: 209 GLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDL-ALAVYEDFKEDGLVEESTTFM 267
Query: 203 SLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR 261
L+ LC +++ ++ M + +P + Y +I + ++ ++ M
Sbjct: 268 ILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRD 327
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
+ PD + TL+ CK G +E+ +E+ EM + IL + + Y LI+ ++ A
Sbjct: 328 EIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSA 387
Query: 322 FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
+L+ +++ G Y ++ C V + KA+ L I + PDF T SP +V
Sbjct: 388 CNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFET-LSPIMV 446
Query: 382 TY---NALIYGNCLLGRVEE----------------------------ALGILRGMAEMS 410
Y N L + +L R+ E IL+ S
Sbjct: 447 AYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGS 506
Query: 411 LSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNS 470
+S YNI++ K+G++ K+ L EM + G F D +Y+
Sbjct: 507 VS----VYNILMEALYKMGDIQKSLSLFYEMRKLG---------FE------PDSSSYSI 547
Query: 471 VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGF 510
I + +G+V A H+++ + + Y+ L G
Sbjct: 548 AICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGL 587
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 157/388 (40%), Gaps = 15/388 (3%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTV 133
D + +V EM P V Y L+ C+D RV+ + ++G + + + +
Sbjct: 315 DASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVL 374
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I+G A +++ A L +++ G D YN +I + + N V +A L+ ++
Sbjct: 375 IEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLC-SVNQVDKAYKLFQVAIEEE 433
Query: 194 IPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
+ + T + ++ N + E I P + Y C D ++AM
Sbjct: 434 LEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYP-VSDYLTQFFKLLCADEEKNAMA 492
Query: 254 --IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+F + +G +V N L+ K G+++K+ + EM + G P++ +YS I C
Sbjct: 493 LDVFYILKTKGHGSVSVY-NILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICC 551
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
+ + A +++ P AY +L C +GE L E +
Sbjct: 552 FVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGN----- 606
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
E P Y + C E+ + ++ M + + ++V Y +ISG K G +
Sbjct: 607 --VESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTI 664
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLM 459
A E+ E+ + + D+ V+ ++
Sbjct: 665 KVAREVFTELKKRKVMTEADMVVYEEML 692
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 139/284 (48%), Gaps = 8/284 (2%)
Query: 91 FLPSVATYNVLLHAYCR--DKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKE 145
F P +T+ +LL CR D + +L M +EP+ V+ + + LC R+ E
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP-WTTYTSL 204
A++L++E+ K PD+ TYN L+ + K +L + D+M+ P ++T L
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV-VYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 205 IHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL 263
I +C + N+ +A + +++ +GF+P YN ++ +C + +A+G+++ M + G+
Sbjct: 237 IDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFD 323
PD + NTLI K G +E+A MV+ G P+ TY+ L++ +C + A
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALS 356
Query: 324 LFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
L EM G +P + Y L+ C K L + M G
Sbjct: 357 LLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSG 400
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 139/299 (46%), Gaps = 6/299 (2%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVI 134
N ++VL+ MVN+G P T ++ + + C RVDEA +++ + + P+ ++N ++
Sbjct: 142 NVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 135 DGLCAKRRIKEAEELLQEMNSK-GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
LC + + E + EM + PD V++ LI + + NL A+ L ++
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR-EAMYLVSKLGNAG 260
Query: 194 IPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
Y +++ CT + +A V+ +M G EP +TYN LI RV++A
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M D G PD +L+ C+ GE A + EM RG PN TY+ L+ L
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
C R + + +L+ M G+ Y LV + G+ ++A+ + D + L D
Sbjct: 381 CKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSD 439
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 114/234 (48%), Gaps = 15/234 (6%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C+ A ++S++ N+GF P YN ++ +C + EA+G+ + M VEP+
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
+++NT+I GL R++EA L+ M G PD+ TY +L+ M + + A++L +
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE-SLGALSLLE 359
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M+ + TY +L+H LC + DK +++ M +SG + Y L+ +
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
+V +A +F D + + ++ Y LE + + E+G++P
Sbjct: 420 KVAEAYEVF----------DYAVDSKSLSDASAYSTLETTLKWLKKAKEQGLVP 463
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 143/374 (38%), Gaps = 51/374 (13%)
Query: 318 LSEAFDLFREMLGG--GLSPREYAYFNLVGAYCLVGE--FSKAFHLRDEMIHKGFLPDFV 373
+++ LF+ +L P + L+ C + S + + M++ G PD
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPD-- 158
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
VT + + C GRV+EA +++ + E PD +YN ++ CK +L
Sbjct: 159 ------QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVN----------------------YNSV 471
+E + EM + ++ DL F+ L+ + + N YN++
Sbjct: 213 VYEFVDEMRDDFDVKP-DLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 472 INAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLC 531
+ +C + S+A+ ++ +M+ G + Y L G K R A+ L+ D
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR-MYLKTMVDAG 330
Query: 532 TSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNF 591
T TY +L+ G +G A S+L + P+ YN
Sbjct: 331 YEPDTATYTSLMN---------------GMCRKGESLGALSLLEEMEARGCAPNDCTYNT 375
Query: 592 LIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSC 651
L+ C+ R +DK +Y M G L+++L G+ E V + S
Sbjct: 376 LLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSK 435
Query: 652 NINGFELHKALSET 665
+++ + L T
Sbjct: 436 SLSDASAYSTLETT 449
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 117/325 (36%), Gaps = 60/325 (18%)
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP 370
C P +S + M+ GL P + V + C G +A L E+ K P
Sbjct: 133 CRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPP 192
Query: 371 D----------------------FVTEF------SPSLVTYNALIYGNCLLGRVEEALGI 402
D FV E P LV++ LI C + EA+ +
Sbjct: 193 DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYL 252
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
+ + PD YN ++ GFC L + +A + +M E G D +++L+ GL
Sbjct: 253 VSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG--VEPDQITYNTLIFGL 310
Query: 463 S----------------------DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRAS 500
S D Y S++N C +GE AL L +EME G
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND 370
Query: 501 VLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKG 560
Y L G KAR L M L + Y TL+ + + V E +
Sbjct: 371 CTYNTLLHGL-CKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKS--GKVAEAYEV 427
Query: 561 FGM----RGLKNEAA-SVLNTVLQW 580
F + L + +A S L T L+W
Sbjct: 428 FDYAVDSKSLSDASAYSTLETTLKW 452
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 195/456 (42%), Gaps = 43/456 (9%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRG 120
++IH C A +L +M G P TYN+LL + ++ A+ +R
Sbjct: 345 TMIHT-CGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRK 403
Query: 121 MAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
+ + P+ V+ V+ LC ++ + E E ++ EM+ + D + +I M N LV+
Sbjct: 404 VGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSV-PVIMQMYVNEGLVV 462
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMI------ASGFEPSLVT 234
+A AL+++ + + + T+L ++ Y +K V E + SG ++
Sbjct: 463 QAKALFERFQLDCV----LSSTTLAAVIDVY-AEKGLWVEAETVFYGKRNMSGQRNDVLE 517
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
YN +I AY + A+ +F+GM ++G PD N+L +++A + AEM+
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
+ G P TY+ +I LS+A DL+ M G+ P E Y +L+ + G
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
+A M G + + +LI +G +EEA + M + PD
Sbjct: 638 EAIQYFRMMEEHGVQSNH--------IVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 415 DVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG------------- 461
+ N ++S LG + +A + + E G + A L KG
Sbjct: 690 VAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEE 749
Query: 462 ------LSDEVNYNSVINAYCAEGEVSKALILHDEM 491
LSD ++N V+ Y A+G++S+ L EM
Sbjct: 750 MRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 161/394 (40%), Gaps = 52/394 (13%)
Query: 76 NDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNT 132
++ A + M N G P TYN L VDEA IL M +P ++
Sbjct: 531 HEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAA 590
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+I + +A +L + M G+ P+ V Y +LI ++ + +V AI + M++
Sbjct: 591 MIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAE-SGMVEEAIQYFRMMEEH 649
Query: 193 RIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+ TSLI +++A +V+ +M S P + N ++ V +A
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
IF + ++G T D + T++ + G L++A E+ EM E G+L + ++++++ C
Sbjct: 710 ESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMAC 768
Query: 312 LCPQRRLSEAFDLFREML--------------------GGGLSPREYAYFNLVGAY---- 347
+LSE +LF EML GG+ P E A L AY
Sbjct: 769 YAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGV-PSE-AVSQLQTAYNEAK 826
Query: 348 ------------CLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGR 395
+G ++ A E+ G +P YNA+IY G
Sbjct: 827 PLATPAITATLFSAMGLYAYALESCQELT-SGEIPR-------EHFAYNAVIYTYSASGD 878
Query: 396 VEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
++ AL M E L PD V+ ++ + K G
Sbjct: 879 IDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAG 912
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 134/584 (22%), Positives = 216/584 (36%), Gaps = 72/584 (12%)
Query: 88 NSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIK 144
+ ++P+V YN++L A R + DE MA V P ++ ++D +K
Sbjct: 138 HQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVK 197
Query: 145 EAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSL 204
EA ++ M + PD VT T++ KN+ RA R W
Sbjct: 198 EALLWIKHMGQRMHFPDEVTMATVVRVF-KNSGEFDRA---------DRFFKGW------ 241
Query: 205 IHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIH----AYCCRDRVQDAMGIFRGMPD 260
C VD + +G S V + + R+ ++ ++ G
Sbjct: 242 ----CAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDS 297
Query: 261 RGLTPD-AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
P NTLI + K G L A + +EM++ G+ + T++ +I LS
Sbjct: 298 SPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLS 357
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
EA L ++M G+SP Y L+ + G+ A ++ G PD
Sbjct: 358 EAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPD-------- 409
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
VT+ A+++ C V E ++ M S+ D+ S +++ + G + +A L
Sbjct: 410 TVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFE 469
Query: 440 EMDEAGGIRGVDLAVFSSLM--KGL------------------SDEVNYNSVINAYCAEG 479
+ LA + KGL +D + YN +I AY
Sbjct: 470 RFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAK 529
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTY 539
KAL L M++ G+ Y LF A+ L M C TY
Sbjct: 530 LHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKP-GCKTY 588
Query: 540 DTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRR 599
+I S V L GL ++A + + + KP+ VY LI
Sbjct: 589 AAMI--------ASYVRL-------GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 600 RNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRV 643
V++A + M +G S+ + +LIKA VG E RRV
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRV 677
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 152/359 (42%), Gaps = 48/359 (13%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D A ++L+EM++SG P TY ++ +Y R + +A+ + M V+PN V + ++
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSL 626
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I+G ++EA + + M G+ + + +LI A SK + A +YD+MK
Sbjct: 627 INGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSK-VGCLEEARRVYDKMKDSE 685
Query: 194 IPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
S++ L V +A +F + G ++++ +++ Y + +A+
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAI 744
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM-VERGILPNADTYSKLIDC 311
+ M + GL D N ++ + G+L + E+ EM VER +L + T+ L
Sbjct: 745 EVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTL 804
Query: 312 L----CPQRRLSE---AFD-------------LFREM------------LGGGLSPRE-Y 338
L P +S+ A++ LF M L G PRE +
Sbjct: 805 LKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHF 864
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
AY ++ Y G+ A M KG PD VT+ Y IYG G VE
Sbjct: 865 AYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQ------AYLVGIYGKA--GMVE 915
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 116/289 (40%), Gaps = 38/289 (13%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRD-KRVDEAMGILRGMAVEP--NVVSFNTV 133
+ A +V +M +S P VA N +L + C D V EA I + + +V+SF T+
Sbjct: 672 EEARRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESIFNALREKGTCDVISFATM 730
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ + EA E+ +EM GL D ++N ++ + + L ++ + +++
Sbjct: 731 MYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERK 790
Query: 194 IPVPWTTYTSLIHLL--------------CTYNVDKAY-------KVFTEM--------- 223
+ + W T+ +L LL YN K +F+ M
Sbjct: 791 LLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALES 850
Query: 224 ---IASGFEP-SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCK 279
+ SG P YN +I+ Y + A+ + M ++GL PD V L+ + K
Sbjct: 851 CQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGK 910
Query: 280 YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
G +E + + + + P+ + + D R A + +EM
Sbjct: 911 AGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEM 959
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/504 (22%), Positives = 218/504 (43%), Gaps = 41/504 (8%)
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
++ A +L +M KG+ D + LI + K +V ++ ++ +MK + +Y
Sbjct: 165 KLNHARCILLDMPEKGVPWDEDMFVVLIESYGK-AGIVQESVKIFQKMKDLGVERTIKSY 223
Query: 202 TSLIHLLCT---YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
SL ++ Y + K Y F +M++ G EP+ TYN ++ + R++ A+ F M
Sbjct: 224 NSLFKVILRRGRYMMAKRY--FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM 281
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRL 318
RG++PD NT+I FC++ ++++A ++ EM I P+ +Y+ +I R+
Sbjct: 282 KTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRV 341
Query: 319 SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSP 378
+ +F EM G+ P Y L+ C G+ +A ++ M+ K P + F
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLK 401
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
LV+ + G + A +L+ MA +++ + Y ++I CK +A +L+
Sbjct: 402 LLVSQSK-------AGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLL 454
Query: 439 VEMDEAGGI-RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
+ E I R D + YN +I C G+ +KA +L ++ G
Sbjct: 455 DTLIEKEIILRHQDTLEM--------EPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 506
Query: 498 RASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVEL 557
L L G K+ + E +L++ + Y+ LI
Sbjct: 507 DQDALN-NLIRGHAKEGNPDSSYE-ILKIMSRRGVPRESNAYELLI-------------- 550
Query: 558 AKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMV--HY 615
K + +G +A + L+++++ + PD +++ +I V A + M M+ +
Sbjct: 551 -KSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNV 609
Query: 616 GFASHMFSVLALIKALFHVGRHNE 639
G +M + +++AL G E
Sbjct: 610 GIEDNMDLIAKILEALLMRGHVEE 633
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 200/454 (44%), Gaps = 28/454 (6%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLC 138
+L +M G + VL+ +Y + V E++ I + M VE + S+N++ +
Sbjct: 172 ILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVIL 231
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW 198
+ R A+ +M S+G+ P TYN ++ + L A+ ++ MK + I
Sbjct: 232 RRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLET-ALRFFEDMKTRGISPDD 290
Query: 199 TTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRG 257
T+ ++I+ C + +D+A K+F EM + PS+V+Y +I Y DRV D + IF
Sbjct: 291 ATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEE 350
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT-YSKLIDCLCPQR 316
M G+ P+A +TL+ C G++ +A + M+ + I P ++ + KL+
Sbjct: 351 MRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAG 410
Query: 317 RLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL--PDFVT 374
++ A ++ + M + Y L+ C +++A L D +I K +
Sbjct: 411 DMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTL 470
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
E PS YN +I C G+ +A + R + + + D + N +I G K G +
Sbjct: 471 EMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQD-ALNNLIRGHAKEGNPDSS 527
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVN-YNSVINAYCAEGEVSKALILHDEMEH 493
+E++ M +G+ E N Y +I +Y ++GE A D M
Sbjct: 528 YEILKIMSR----------------RGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVE 571
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMF 527
G + S L+ + + + R + A ++ M
Sbjct: 572 DGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMI 605
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 156/342 (45%), Gaps = 29/342 (8%)
Query: 51 SEMNRKGLDPARESLIHLLCCD--QLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRD 108
++M +G++P R + +L L+ + A + +M G P AT+N +++ +CR
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRF 303
Query: 109 KRVDEAMGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTY 165
K++DEA + ++G + P+VVS+ T+I G A R+ + + +EM S G+ P++ TY
Sbjct: 304 KKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTY 363
Query: 166 NTLITAM--------SKN--TNLVIRAIALYDQ------MKQQRIPVPWTTYTSLIHLLC 209
+TL+ + +KN N++ + IA D + Q T ++ +
Sbjct: 364 STLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMA 423
Query: 210 TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
T NV + +I + + S YN I D + + I R + P A
Sbjct: 424 TLNVPAEAGHYGVLIENQCKAS--AYNRAIKLL---DTLIEKEIILRHQDTLEMEPSAY- 477
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
N +I + C G+ KA + ++++RG+ + D + LI + ++++ + M
Sbjct: 478 -NPIIEYLCNNGQTAKAEVLFRQLMKRGV-QDQDALNNLIRGHAKEGNPDSSYEILKIMS 535
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
G+ AY L+ +Y GE A D M+ G +PD
Sbjct: 536 RRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPD 577
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 188/416 (45%), Gaps = 33/416 (7%)
Query: 9 RRHIVRNSGMTRGFTAAA------AAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPAR 62
R HI N + GF+ ++ +G+ + + SG +++ ++V R G A
Sbjct: 261 RPHIDSNRFVPSGFSNSSVEMMKGPSGTALTSRQYCNSGHIVENVSSVLRRFRWG-PAAE 319
Query: 63 ESLIHL-LCCDQLQNDNAYKVLSEMVNS-----------GFLPSVATYNVLLHAYCRDKR 110
E+L +L L D Q + K +++ N+ GF TY ++ R K+
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 111 VDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNT 167
+L M +PN V++N +I + EA + +M G PD VTY T
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIAS 226
LI +K L I A+ +Y +M+ + TY+ +I+ L ++ A+K+F EM+
Sbjct: 440 LIDIHAKAGFLDI-AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G P+LVTYN ++ + Q+A+ ++R M + G PD V + ++ G LE+A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ EM ++ +P+ Y L+D + +A+ ++ ML GL P +L+
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
+ V + ++A+ L M+ G PSL TY L+ C GR + +G
Sbjct: 619 FLRVNKIAEAYELLQNMLALG--------LRPSLQTY-TLLLSCCTDGRSKLDMGF 665
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 145/302 (48%), Gaps = 17/302 (5%)
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR-IPVPWTTYTSL 204
AEE LQ + GL D+ N ++ M+ N A+ + +K+Q TYT++
Sbjct: 318 AEEALQNL---GLRIDAYQANQVLKQMNDYGN----ALGFFYWLKRQPGFKHDGHTYTTM 370
Query: 205 I-HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL 263
+ +L K+ EM+ G +P+ VTYN LIH+Y + + +AM +F M + G
Sbjct: 371 VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC 430
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFD 323
PD V TLI K G L+ A +M M G+ P+ TYS +I+CL L A
Sbjct: 431 KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 490
Query: 324 LFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTY 383
LF EM+ G +P Y ++ + + A L +M + GF PD VT S+V
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY---SIVME 547
Query: 384 NALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE 443
+ G+C G +EEA + M + + PD+ Y +++ + K G + KA++ M
Sbjct: 548 ---VLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 444 AG 445
AG
Sbjct: 603 AG 604
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 129/311 (41%), Gaps = 39/311 (12%)
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+ Y +VG +F L DEM+ G P+ VTYN LI+ +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--------QPNTVTYNRLIHSYGRANYLN 416
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
EA+ + M E PD V+Y +I K G L A ++ M +AGG+
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLS--------- 466
Query: 458 LMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTR 517
D Y+ +IN G + A L EM G V Y ++ D KAR
Sbjct: 467 -----PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNY 520
Query: 518 GAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTV 577
++ L+++ D+ + F D + + V+E+ G G EA +V +
Sbjct: 521 ---QNALKLYRDMQNA--GFEPDKVT-------YSIVMEV---LGHCGYLEEAEAVFTEM 565
Query: 578 LQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRH 637
Q N+ PD VY L+ + NV+KA+ Y M+H G ++ + +L+ V +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 638 NEVRRVIQNVL 648
E ++QN+L
Sbjct: 626 AEAYELLQNML 636
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 188/416 (45%), Gaps = 33/416 (7%)
Query: 9 RRHIVRNSGMTRGFTAAA------AAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPAR 62
R HI N + GF+ ++ +G+ + + SG +++ ++V R G A
Sbjct: 261 RPHIDSNRFVPSGFSNSSVEMMKGPSGTALTSRQYCNSGHIVENVSSVLRRFRWG-PAAE 319
Query: 63 ESLIHL-LCCDQLQNDNAYKVLSEMVNS-----------GFLPSVATYNVLLHAYCRDKR 110
E+L +L L D Q + K +++ N+ GF TY ++ R K+
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 111 VDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNT 167
+L M +PN V++N +I + EA + +M G PD VTY T
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIAS 226
LI +K L I A+ +Y +M+ + TY+ +I+ L ++ A+K+F EM+
Sbjct: 440 LIDIHAKAGFLDI-AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G P+LVTYN ++ + Q+A+ ++R M + G PD V + ++ G LE+A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ EM ++ +P+ Y L+D + +A+ ++ ML GL P +L+
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
+ V + ++A+ L M+ G PSL TY L+ C GR + +G
Sbjct: 619 FLRVNKIAEAYELLQNMLALG--------LRPSLQTY-TLLLSCCTDGRSKLDMGF 665
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 145/302 (48%), Gaps = 17/302 (5%)
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR-IPVPWTTYTSL 204
AEE LQ + GL D+ N ++ M+ N A+ + +K+Q TYT++
Sbjct: 318 AEEALQNL---GLRIDAYQANQVLKQMNDYGN----ALGFFYWLKRQPGFKHDGHTYTTM 370
Query: 205 I-HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL 263
+ +L K+ EM+ G +P+ VTYN LIH+Y + + +AM +F M + G
Sbjct: 371 VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC 430
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFD 323
PD V TLI K G L+ A +M M G+ P+ TYS +I+CL L A
Sbjct: 431 KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 490
Query: 324 LFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTY 383
LF EM+ G +P Y ++ + + A L +M + GF PD VT S+V
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY---SIVME 547
Query: 384 NALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE 443
+ G+C G +EEA + M + + PD+ Y +++ + K G + KA++ M
Sbjct: 548 ---VLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 444 AG 445
AG
Sbjct: 603 AG 604
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 129/311 (41%), Gaps = 39/311 (12%)
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+ Y +VG +F L DEM+ G P+ VTYN LI+ +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--------QPNTVTYNRLIHSYGRANYLN 416
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
EA+ + M E PD V+Y +I K G L A ++ M +AGG+
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLS--------- 466
Query: 458 LMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTR 517
D Y+ +IN G + A L EM G V Y ++ D KAR
Sbjct: 467 -----PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNY 520
Query: 518 GAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTV 577
++ L+++ D+ + F D + + V+E+ G G EA +V +
Sbjct: 521 ---QNALKLYRDMQNA--GFEPDKVT-------YSIVMEV---LGHCGYLEEAEAVFTEM 565
Query: 578 LQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRH 637
Q N+ PD VY L+ + NV+KA+ Y M+H G ++ + +L+ V +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 638 NEVRRVIQNVL 648
E ++QN+L
Sbjct: 626 AEAYELLQNML 636
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 188/416 (45%), Gaps = 33/416 (7%)
Query: 9 RRHIVRNSGMTRGFTAAA------AAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPAR 62
R HI N + GF+ ++ +G+ + + SG +++ ++V R G A
Sbjct: 261 RPHIDSNRFVPSGFSNSSVEMMKGPSGTALTSRQYCNSGHIVENVSSVLRRFRWG-PAAE 319
Query: 63 ESLIHL-LCCDQLQNDNAYKVLSEMVNS-----------GFLPSVATYNVLLHAYCRDKR 110
E+L +L L D Q + K +++ N+ GF TY ++ R K+
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 111 VDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNT 167
+L M +PN V++N +I + EA + +M G PD VTY T
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIAS 226
LI +K L I A+ +Y +M+ + TY+ +I+ L ++ A+K+F EM+
Sbjct: 440 LIDIHAKAGFLDI-AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G P+LVTYN ++ + Q+A+ ++R M + G PD V + ++ G LE+A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ EM ++ +P+ Y L+D + +A+ ++ ML GL P +L+
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
+ V + ++A+ L M+ G PSL TY L+ C GR + +G
Sbjct: 619 FLRVNKIAEAYELLQNMLALG--------LRPSLQTY-TLLLSCCTDGRSKLDMGF 665
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 145/302 (48%), Gaps = 17/302 (5%)
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR-IPVPWTTYTSL 204
AEE LQ + GL D+ N ++ M+ N A+ + +K+Q TYT++
Sbjct: 318 AEEALQNL---GLRIDAYQANQVLKQMNDYGN----ALGFFYWLKRQPGFKHDGHTYTTM 370
Query: 205 I-HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL 263
+ +L K+ EM+ G +P+ VTYN LIH+Y + + +AM +F M + G
Sbjct: 371 VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC 430
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFD 323
PD V TLI K G L+ A +M M G+ P+ TYS +I+CL L A
Sbjct: 431 KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 490
Query: 324 LFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTY 383
LF EM+ G +P Y ++ + + A L +M + GF PD VT S+V
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY---SIVME 547
Query: 384 NALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE 443
+ G+C G +EEA + M + + PD+ Y +++ + K G + KA++ M
Sbjct: 548 ---VLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 444 AG 445
AG
Sbjct: 603 AG 604
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 129/311 (41%), Gaps = 39/311 (12%)
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+ Y +VG +F L DEM+ G P+ VTYN LI+ +
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--------QPNTVTYNRLIHSYGRANYLN 416
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
EA+ + M E PD V+Y +I K G L A ++ M +AGG+
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLS--------- 466
Query: 458 LMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTR 517
D Y+ +IN G + A L EM G V Y ++ D KAR
Sbjct: 467 -----PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNY 520
Query: 518 GAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTV 577
++ L+++ D+ + F D + + V+E+ G G EA +V +
Sbjct: 521 ---QNALKLYRDMQNA--GFEPDKVT-------YSIVMEV---LGHCGYLEEAEAVFTEM 565
Query: 578 LQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRH 637
Q N+ PD VY L+ + NV+KA+ Y M+H G ++ + +L+ V +
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 638 NEVRRVIQNVL 648
E ++QN+L
Sbjct: 626 AEAYELLQNML 636
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 8/262 (3%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK---RVDEAMGILRGMAVEPNVVSFNTVI 134
+A KV +M F P + +Y +LL + ++ RVDE ++ EP+VV++ +I
Sbjct: 215 DAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIII 274
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+ C ++ +EA EM + P + +LI + L A+ +++ K
Sbjct: 275 NAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN-DALEFFERSKSSGF 333
Query: 195 PVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
P+ TY +L+ C + ++ AYK EM G P+ TY+ ++H R ++A
Sbjct: 334 PLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYE 393
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
+++ M P ++ FC L+ A ++ EM +G+LP +S LI LC
Sbjct: 394 VYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALC 450
Query: 314 PQRRLSEAFDLFREMLGGGLSP 335
+ +L EA + F EML G+ P
Sbjct: 451 HENKLDEACEYFNEMLDVGIRP 472
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 182/419 (43%), Gaps = 21/419 (5%)
Query: 31 LESEPKKVTSGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMVN-- 88
+E KK+++ G+L + N+KG + L+ + L +K++ +V+
Sbjct: 97 IEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALI--ESLGKIKQFKLIWSLVDDM 154
Query: 89 -SGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIK 144
+ L S T+ ++ Y R ++V EA+G M + FN ++D L R +
Sbjct: 155 KAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVG 214
Query: 145 EAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSL 204
+A+++ +M K PD +Y L+ + NL +R + +MK + Y +
Sbjct: 215 DAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL-LRVDEVNREMKDEGFEPDVVAYGII 273
Query: 205 IHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL 263
I+ C ++A + F EM +PS + LI+ ++ DA+ F G
Sbjct: 274 INAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGF 333
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFD 323
+A N L+ +C +E A++ EM +G+ PNA TY ++ L +R EA++
Sbjct: 334 PLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYE 393
Query: 324 LFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTY 383
+++ M P Y +V +C A + DEM KG L P + +
Sbjct: 394 VYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL--------PGMHMF 442
Query: 384 NALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
++LI C +++EA M ++ + P ++ + G K +L+V+MD
Sbjct: 443 SSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 155/364 (42%), Gaps = 29/364 (7%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
++N +I+ L ++ K L+ +M +K L LI+ V AI + +
Sbjct: 130 NYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETF--ALISRRYARARKVKEAIGAFHK 187
Query: 189 MKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
M++ + + + ++ L + NV A KVF +M FEP + +Y L+ +
Sbjct: 188 MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 247
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
+ + R M D G PD V +I CK + E+A EM +R P+ +
Sbjct: 248 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 307
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
LI+ L +++L++A + F G Y LVGAYC A+ DEM KG
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
P+ TY+ +++ + R +EA + + MS P +Y I++ FC
Sbjct: 368 --------VGPNARTYDIILHHLIRMQRSKEAYEVYQT---MSCEPTVSTYEIMVRMFCN 416
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALIL 487
L A ++ EM G + G+ + ++S+I A C E ++ +A
Sbjct: 417 KERLDMAIKIWDEMKGKGVLPGMHM---------------FSSLITALCHENKLDEACEY 461
Query: 488 HDEM 491
+EM
Sbjct: 462 FNEM 465
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 167/376 (44%), Gaps = 15/376 (3%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFN 131
Q D A+ ++ M + S+ T+ +L+ Y R EA+ M P+ ++F+
Sbjct: 166 QFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFS 225
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
VI L KRR EA+ + + PD + Y L+ + + A ++ +MK
Sbjct: 226 IVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCR-AGEISEAEKVFKEMKL 283
Query: 192 QRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
I TY+ +I LC + +A+ VF +M+ SG P+ +T+N L+ + R +
Sbjct: 284 AGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEK 343
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
+ ++ M G PD + N LI C+ LE A ++ M+++ NA T++ +
Sbjct: 344 VLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFR 403
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP 370
+ +R ++ A ++ +M+ P Y L+ + ++ EM K
Sbjct: 404 YIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDK---- 459
Query: 371 DFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMS-LSPDDVSYNIVISGFCKLG 429
E P++ TY L+ C +G A + + M E L+P Y +V++ + G
Sbjct: 460 ----EVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAG 515
Query: 430 ELGKAFELMVEMDEAG 445
+L K EL+ +M + G
Sbjct: 516 QLKKHEELVEKMIQKG 531
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 91 FLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAE 147
F P V Y L+ +CR + EA + + M +EPNV +++ VID LC +I A
Sbjct: 251 FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAH 310
Query: 148 ELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHL 207
++ +M G AP+++T+N L+ K + + +Y+QMK+ TY LI
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVK-AGRTEKVLQVYNQMKKLGCEPDTITYNFLIEA 369
Query: 208 LC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPD 266
C N++ A KV MI E + T+N + + V A ++ M + P+
Sbjct: 370 HCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPN 429
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
V N L+ F + +M+ EM ++ + PN +TY L+ C + A+ LF+
Sbjct: 430 TVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFK 489
Query: 327 EMLGGG-LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
EM+ L+P Y ++ G+ K L ++MI KG +
Sbjct: 490 EMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 158/370 (42%), Gaps = 35/370 (9%)
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIH 240
A L D MK + + + T+T LI + +A F M G P + ++ +I
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
+ R +A F + DR PD ++ L+ +C+ GE+ +A ++ EM GI P
Sbjct: 230 NLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
N TYS +ID LC ++S A D+F +ML G +P + NL+ + G K +
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVY 348
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
++M G PD +TYN LI +C +E A+ +L M + + ++N
Sbjct: 349 NQMKKLGCEPD--------TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 421 VISGFCKLGELGKAFELMVEMDEAG----------------GIRGVDLAVFSSLMKGLSD 464
+ K ++ A + +M EA G + D+ + + K + D
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVL--KMKKEMDD 458
Query: 465 ---EVNYNS---VINAYCAEGEVSKALILHDEMEHHGSLRASV-LYIMLFDGFDKKARTR 517
E N N+ ++ +C G + A L EM L S+ LY M+ + + +
Sbjct: 459 KEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLK 518
Query: 518 GAKESLLRMF 527
+E + +M
Sbjct: 519 KHEELVEKMI 528
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 134/263 (50%), Gaps = 6/263 (2%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A KV EM +G P+V TY++++ A CR ++ A + M PN ++FN ++
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
R ++ ++ +M G PD++TYN LI A ++ NL A+ + + M +++
Sbjct: 334 VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLE-NAVKVLNTMIKKKCE 392
Query: 196 VPWTTYTSLI-HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
V +T+ ++ ++ +V+ A++++++M+ + EP+ VTYN L+ + + +
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL-PNADTYSKLIDCLC 313
+ M D+ + P+ L+T FC G A+++ EMVE L P+ Y ++ L
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLR 512
Query: 314 PQRRLSEAFDLFREMLGGGLSPR 336
+L + +L +M+ GL R
Sbjct: 513 RAGQLKKHEELVEKMIQKGLVAR 535
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 162/406 (39%), Gaps = 56/406 (13%)
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
N +I K + + A+ + M R + + +T++ LI SEA F M
Sbjct: 155 NEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMED 214
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
G P + A+ ++ S+A + F F P ++ Y L+ G
Sbjct: 215 YGCVPDKIAFSIVISNLSRKRRASEA---------QSFFDSLKDRFEPDVIVYTNLVRGW 265
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG----- 445
C G + EA + + M + P+ +Y+IVI C+ G++ +A ++ +M ++G
Sbjct: 266 CRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNA 325
Query: 446 -------------GIRGVDLAVFSSLMKGL---SDEVNYNSVINAYCAEGEVSKAL-ILH 488
G L V++ MK L D + YN +I A+C + + A+ +L+
Sbjct: 326 ITFNNLMRVHVKAGRTEKVLQVYNQ-MKKLGCEPDTITYNFLIEAHCRDENLENAVKVLN 384
Query: 489 DEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN-CS 547
++ + AS + +F +KK GA +M C T TY+ L+
Sbjct: 385 TMIKKKCEVNAST-FNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP-NTVTYNILMRMFVG 442
Query: 548 NNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYN 607
+ V+++ K + ++ P+ Y L+ C + + AY
Sbjct: 443 SKSTDMVLKMKKEMDDKEVE----------------PNVNTYRLLVTMFCGMGHWNNAYK 486
Query: 608 MYMEMVHYGFASHMFS----VLALIKALFHVGRHNE-VRRVIQNVL 648
++ EMV + S VLA ++ + +H E V ++IQ L
Sbjct: 487 LFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 134/312 (42%), Gaps = 46/312 (14%)
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
Y+++ID R+ A+ L M + + L+ Y G S+A H + M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 365 HKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
G +PD + ++ +I R EA + + PD + Y ++ G
Sbjct: 214 DYGCVPD--------KIAFSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRG 264
Query: 425 FCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKA 484
+C+ GE+ +A ++ EM AG ++ V++ Y+ VI+A C G++S+A
Sbjct: 265 WCRAGEISEAEKVFKEMKLAG----IEPNVYT-----------YSIVIDALCRCGQISRA 309
Query: 485 LILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYD---LCTSLPTFTYDT 541
+ +M G ++ + L K RT E +L+++ L T TY+
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRVHVKAGRT----EKVLQVYNQMKKLGCEPDTITYNF 365
Query: 542 LIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRN 601
LIE +E L+N A VLNT+++ + + + +N + ++R+
Sbjct: 366 LIEAHCRDE--------------NLEN-AVKVLNTMIKKKCEVNASTFNTIFRYIEKKRD 410
Query: 602 VDKAYNMYMEMV 613
V+ A+ MY +M+
Sbjct: 411 VNGAHRMYSKMM 422
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 107/276 (38%), Gaps = 40/276 (14%)
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+ Y ++ V +F A+HL D M + S+ T+ LI G
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNV--------EISIETFTILIRRYVRAGLAS 203
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
EA+ M + PD ++++IVIS L +A E D D+ V+++
Sbjct: 204 EAVHCFNRMEDYGCVPDKIAFSIVISN---LSRKRRASEAQSFFDSLKDRFEPDVIVYTN 260
Query: 458 LMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTR 517
L++G +C GE+S+A + EM+ G Y ++ D + +
Sbjct: 261 LVRG-------------WCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 518 GAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTV 577
A + M C T++ L+ V + G + L+ V N +
Sbjct: 308 RAHDVFADMLDSGCAP-NAITFNNLMR----------VHVKAGRTEKVLQ-----VYNQM 351
Query: 578 LQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMV 613
+ +PD YNFLI HCR N++ A + M+
Sbjct: 352 KKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMI 387
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 170/368 (46%), Gaps = 15/368 (4%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----PNVVSFNTVI 134
+ V + + GF SV T N L+H Y ++D+ + + A++ PN ++ +I
Sbjct: 183 GFDVFKRLCDCGFTLSVITLNTLIH-YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMI 241
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
LC + R+KE +LL + K P SV NT + + +++L ++ + +
Sbjct: 242 QVLCKEGRLKEVVDLLDRICGKRCLP-SVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNM 300
Query: 195 PVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
V Y+ +++ ++ A KVF EM+ GF + Y + C + V++A
Sbjct: 301 VVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAER 360
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
+ M + G++P N LI F ++G EK E MV RG++P+ +++++ +
Sbjct: 361 LLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVS 420
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
++ A ++ + + G P E+ Y +L+ + + +A L EM ++
Sbjct: 421 KIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYR------- 473
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
+ SP + +LI G C G+VE L+ M + + P+ Y+ +I F K+G+
Sbjct: 474 -KMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTN 532
Query: 434 AFELMVEM 441
A + EM
Sbjct: 533 ADRVYNEM 540
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 30/300 (10%)
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG-IFRGMPDRGLTPDAVICNTLI 274
+ VF + GF S++T N LIH Y + ++ D + I+ D+ + P+ + +I
Sbjct: 183 GFDVFKRLCDCGFTLSVITLNTLIH-YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMI 241
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
CK G L++ ++ + + LP+ + L+ + + R+ E+ L + +L +
Sbjct: 242 QVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMV 301
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
Y +V A G+ A + DEM+ +G FS + Y + C G
Sbjct: 302 VDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRG--------FSANSFVYTVFVRVCCEKG 353
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF---ELMVE----------- 440
V+EA +L M E +SP D ++N +I GF + G K E+MV
Sbjct: 354 DVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFN 413
Query: 441 --MDEAGGIRGVDLA---VFSSLMKG-LSDEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
+ I V+ A + S+ KG + DE Y+ +I + ++ +AL L EME+
Sbjct: 414 EMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYR 473
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 147/340 (43%), Gaps = 41/340 (12%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR---G 120
+LIH ++ +D +++ ++ P+ T +++ C++ R+ E + +L G
Sbjct: 204 TLIHYSSKSKI-DDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICG 262
Query: 121 MAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
P+V+ +++ + + RI+E+ LL+ + K + D++ Y+ ++ A +K +LV
Sbjct: 263 KRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLV- 321
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEM---------------- 223
A ++D+M Q+ YT + + C +V +A ++ +EM
Sbjct: 322 SARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLI 381
Query: 224 -------------------IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLT 264
+ G PS +NE++ + + V A I D+G
Sbjct: 382 GGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFV 441
Query: 265 PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
PD + LI F + ++++A ++ EM R + P + + LI LC ++
Sbjct: 442 PDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKY 501
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
+ M + P Y L+ A+ +G+ + A + +EMI
Sbjct: 502 LKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 104/256 (40%), Gaps = 38/256 (14%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
+A KV EM+ GF + Y V + C V EA +L M V P +FN +I
Sbjct: 322 SARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLI 381
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
G ++ E + M ++GL P +N ++ ++SK
Sbjct: 382 GGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSK-------------------- 421
Query: 195 PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
NV++A ++ T+ I GF P TY+ LI + + + A+ +
Sbjct: 422 ---------------IENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 466
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F M R ++P + +LI C G++E + M +R I PNAD Y LI
Sbjct: 467 FYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQK 526
Query: 315 QRRLSEAFDLFREMLG 330
+ A ++ EM+
Sbjct: 527 IGDKTNADRVYNEMIS 542
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 37 KVTSGGLLKTTTTVSEMNRKGLDPARESLIHLL----CCDQLQNDNAYKVLSEMVNSGFL 92
K G L+ EM ++G + S ++ + CC++ A ++LSEM SG
Sbjct: 314 KAKEGDLVSARKVFDEMLQRGF--SANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVS 371
Query: 93 PSVATYNVLLHAYCR---DKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
P T+N L+ + R +++ E ++ + P+ +FN ++ + + A E+
Sbjct: 372 PYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEI 431
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
L + KG PD TY+ LI + N + +A+ L+ +M+ +++ + + SLI LC
Sbjct: 432 LTKSIDKGFVPDEHTYSHLIRGFIEG-NDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLC 490
Query: 210 TY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAY 242
T V+ K M EP+ Y+ LI A+
Sbjct: 491 TCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAF 524
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 179/457 (39%), Gaps = 86/457 (18%)
Query: 233 VTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAE 292
+ ++ L+ Y ++ +F+ + D G T + NTLI + K + + +
Sbjct: 165 LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYEC 224
Query: 293 MVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE 352
+++ I PN T +I LC + RL E DL + G CL
Sbjct: 225 AIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLD---------------RICGKRCL--- 266
Query: 353 FSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLS 412
PS++ +L++ R+EE++ +L+ + ++
Sbjct: 267 -------------------------PSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMV 301
Query: 413 PDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS-DEVNYNSV 471
D + Y+IV+ K G+L A ++ EM L +G S + Y
Sbjct: 302 VDTIGYSIVVYAKAKEGDLVSARKVFDEM----------------LQRGFSANSFVYTVF 345
Query: 472 INAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLC 531
+ C +G+V +A L EME G + L GF AR ++ L + C
Sbjct: 346 VRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGF---ARFGWEEKGL-----EYC 397
Query: 532 TSLPTFTYDTLIENCS--NNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVY 589
+ T L+ +CS N KSV ++ N A +L + + PD Y
Sbjct: 398 EVMVT---RGLMPSCSAFNEMVKSVSKIENV-------NRANEILTKSIDKGFVPDEHTY 447
Query: 590 NFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVL-ALIKALFHVGR---HNEVRRVIQ 645
+ LI ++D+A ++ EM Y S F V +LI L G+ + ++++
Sbjct: 448 SHLIRGFIEGNDIDQALKLFYEM-EYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMK 506
Query: 646 NVLRSCNINGFE-LHKALSETGVIVREDKVKDVLLNV 681
L N + ++ L KA + G D+V + +++V
Sbjct: 507 KRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMISV 543
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 162/359 (45%), Gaps = 13/359 (3%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFN 131
Q + VL EM G L ++ T+ + + A+ K +A+GI ++ + V + N
Sbjct: 210 QFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETIN 268
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
++D L + KEA+ L ++ + P+ +TY L+ + NL+ A D + Q
Sbjct: 269 CLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ 327
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
P L LL + A K+F M + G P++ +Y +I +C + ++ A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ F M D GL PDA + LIT F +L+ +E+ EM E+G P+ TY+ LI
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
+ Q+ A ++ +M+ + P + + ++ +Y + + + +EMI KG PD
Sbjct: 448 MANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPD 507
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGE 430
+Y LI G G+ EA L M + + + YN + F + G+
Sbjct: 508 --------DNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 159/360 (44%), Gaps = 13/360 (3%)
Query: 89 SGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEP--NVVSFNTVIDGLCAKRRIKEA 146
GF TYN ++ + ++ + + +L M + + +F + A + K+A
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKA 248
Query: 147 EELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
+ + M T N L+ ++ + L A L+D++K++ P TYT L++
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERFTP-NMMTYTVLLN 306
Query: 207 LLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
C N+ +A +++ +MI G +P +V +N ++ + DA+ +F M +G P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
+ +I FCK +E A E +MV+ G+ P+A Y+ LI Q++L ++L
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 326 REMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNA 385
+EM G P Y L+ A + ++MI E PS+ T+N
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ--------NEIEPSIHTFNM 478
Query: 386 LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
++ + E + M + + PDD SY ++I G G+ +A + EM + G
Sbjct: 479 IMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG 538
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 11/287 (3%)
Query: 43 LLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYN 99
L++ ++M +GL P A ++ L + ++D A K+ M + G P+V +Y
Sbjct: 314 LIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD-AIKLFHVMKSKGPCPNVRSYT 372
Query: 100 VLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
+++ +C+ ++ A+ M ++P+ + +I G ++++ ELL+EM K
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDK 215
G PD TYN LI M+ N + A +Y++M Q I T+ ++ N +
Sbjct: 433 GHPPDGKTYNALIKLMA-NQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEM 491
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
V+ EMI G P +Y LI + ++A M D+G+ + N
Sbjct: 492 GRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAA 551
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
F + G+ E E+ G A+ +++ +RR + F
Sbjct: 552 DFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMT--RRRFKQRF 596
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 153/389 (39%), Gaps = 43/389 (11%)
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
+G D+ N++++ K + E + EM +G+L +T++ + + +
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKK 247
Query: 321 AFDLFREMLGGGLSPREYAY-FNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
A +F M ++Y + + CL+ +A ++ + F+P+
Sbjct: 248 AVGIFELM-------KKYKFKIGVETINCLLDSLGRAKLGKEAQV---LFDKLKERFTPN 297
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
++TY L+ G C + + EA I M + L PD V++N+++ G + + A +L
Sbjct: 298 MMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH 357
Query: 440 EMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRA 499
M G V +Y +I +C + + A+ D+M G
Sbjct: 358 VMKSKGPCPNVR---------------SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 500 SVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAK 559
+ +Y L GF + + E LL+ + TY+ LI+ +N +
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYE-LLKEMQEKGHPPDGKTYNALIKLMANQK--------- 452
Query: 560 GFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFAS 619
+ A + N ++Q +P +N ++ + RN + ++ EM+ G
Sbjct: 453 ------MPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 620 HMFSVLALIKALFHVGRHNEVRRVIQNVL 648
S LI+ L G+ E R ++ +L
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEML 535
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 162/380 (42%), Gaps = 50/380 (13%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLC 138
VL++ +SG+ + + L+ Y K ++ + M P N ++D L
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 139 AKR-RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
+ R +++A EL + G+ P++ +YN L+ A N +L I
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI----------------- 208
Query: 198 WTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRG 257
AY++F +M+ P + +Y LI +C + +V AM +
Sbjct: 209 ------------------AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
M ++G PD + TL+ C+ +L +A+++ M +G P+ Y+ +I C + R
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDR 310
Query: 318 LSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
+A + +ML G SP +Y L+G C G F + +EMI KGF P F
Sbjct: 311 AMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVS-- 368
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA--- 434
N L+ G C G+VEEA ++ + + + ++ +VI C E K
Sbjct: 369 ------NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLF 422
Query: 435 FELMVEMDEAGGIRGVDLAV 454
E V+ + G R VD+ +
Sbjct: 423 LEDAVKEEITGDTRIVDVGI 442
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 127/254 (50%), Gaps = 6/254 (2%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
A+++ G +P+ +YN+L+ A+C + + A + M V P+V S+ +I
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
G C K ++ A ELL +M +KG PD ++Y TL+ ++ + T L A L +MK +
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR-EAYKLLCRMKLKGC 291
Query: 195 PVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
Y ++I C + A KV +M+++G P+ V+Y LI C + +
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKK 351
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
M +G +P + N L+ FC +G++E+A ++ +++ G ++DT+ +I +C
Sbjct: 352 YLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Query: 314 PQRRLSEAFDLFRE 327
+ SE LF E
Sbjct: 412 NEDE-SEKIKLFLE 424
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 38/218 (17%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNV 127
C + Q + A ++L +M+N GF+P +Y LL++ CR ++ EA +L M ++ P++
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDL 295
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V +NT+I G C + R +A ++L +M S G +P+SV+Y TLI + ++D
Sbjct: 296 VHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQ--------GMFD 347
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
+ K K EMI+ GF P N L+ +C +
Sbjct: 348 EGK---------------------------KYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
V++A + + G T + +I C E EK
Sbjct: 381 VEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 418
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 128/309 (41%), Gaps = 43/309 (13%)
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA 453
G +++A + + + P+ SYN+++ FC +L A++L +M E + VD
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD-- 226
Query: 454 VFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
+Y +I +C +G+V+ A+ L D+M + G + + Y L + +K
Sbjct: 227 -------------SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRK 273
Query: 514 ARTRGAKESLLRMFYDLCTSLPTFT-YDTLIENCSNNEFKSVVELAKGFGMRGLKNEAAS 572
+ R A + L RM C P Y+T+I GF +A
Sbjct: 274 TQLREAYKLLCRMKLKGCN--PDLVHYNTMI---------------LGFCREDRAMDARK 316
Query: 573 VLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALF 632
VL+ +L P+ Y LI C + D+ EM+ GF+ H L+K
Sbjct: 317 VLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC 376
Query: 633 HVGRHNEVRRVIQNVLRSCNINGFELHKALSETGV--IVREDKVKDVLL----NVLAEIA 686
G+ E V++ V++ NG LH E + I ED+ + + L V EI
Sbjct: 377 SFGKVEEACDVVEVVMK----NGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEIT 432
Query: 687 MDGLLLNGG 695
D +++ G
Sbjct: 433 GDTRIVDVG 441
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 157/646 (24%), Positives = 249/646 (38%), Gaps = 72/646 (11%)
Query: 52 EMNRKGLDPARESLIHLLCCDQLQNDNAYKV-----LSEMVNSGFLPSVATYNVLLHAYC 106
EM RKG+ P + L+ + + KV L +M G P T ++L Y
Sbjct: 212 EMIRKGIKPINSTYGTLI---DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYK 268
Query: 107 RDKRVDEAMGILRGMAVEPNVV---------SFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
+ + +A + + + N ++NT+ID +IKEA E + M +G
Sbjct: 269 KAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEG 328
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKA 216
+ P +VT+NT+I N L +L MK P TY LI L N +++A
Sbjct: 329 IVPTTVTFNTMIHIYGNNGQLG-EVTSLMKTMKLHCAPDT-RTYNILISLHTKNNDIERA 386
Query: 217 YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
F EM G +P V+Y L++A+ R V++A G+ M D + D + L
Sbjct: 387 GAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRM 446
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
+ + LEK++ G + +++ YS ID + LSEA +F + ++ R
Sbjct: 447 YVEAEMLEKSWSWFKRFHVAGNM-SSEGYSANIDAYGERGYLSEAERVF--ICCQEVNKR 503
Query: 337 EYAYFN-LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGR 395
+N ++ AY + KA L + M+ G PD TYN L+
Sbjct: 504 TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPD--------KCTYNTLVQILASADM 555
Query: 396 VEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVF 455
+ L M E D + Y VIS F KLG+L A E+ EM E
Sbjct: 556 PHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE------------ 603
Query: 456 SSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKAR 515
D V Y +INA+ G V +A+ + M+ G SV+Y L + K
Sbjct: 604 ---YNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGY 660
Query: 516 TRGAKESLLRMFYDLC--TSLPTF---------------------TYDTLIENCSNNEFK 552
A E++ R C T P +D++ + NEF
Sbjct: 661 LDEA-EAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFT 719
Query: 553 SVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
+ L + G EA + + + D YN ++ +A + EM
Sbjct: 720 FAMMLCM-YKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEM 778
Query: 613 VHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFEL 658
V G + +L L +G + R I+ + + G EL
Sbjct: 779 VSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLEL 824
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 167/347 (48%), Gaps = 17/347 (4%)
Query: 127 VVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALY 186
V+ +N +I + ++A EL + M S G+ PD TYNTL+ ++ + ++ +
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILA-SADMPHKGRCYL 563
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
++M++ Y ++I ++ A +V+ EM+ EP +V Y LI+A+
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE---RGILPNA 302
VQ AM M + G+ ++VI N+LI + K G L++A + ++++ + P+
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDV 683
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
T + +I+ + + +A +F M G E+ + ++ Y G F +A + +
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 363 MIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
M L D P ++YN+++ L GR +EA+ + M + PDD ++ +
Sbjct: 743 MREMKILTD------P--LSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLG 794
Query: 423 SGFCKLGELGKAFELMVEMDEAGGIRGVDLAV--FSSLMKGLSDEVN 467
+ KLG KA + E+ + RG++L + SSL+ G+ D V+
Sbjct: 795 TILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLV-GIGDCVD 840
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 168/400 (42%), Gaps = 41/400 (10%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA----VEPNVVSFNT 132
D + S+M+ G +V TY++++ +YC++ VD A+ + + NV +
Sbjct: 324 DKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTN 383
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN----------------- 175
+I G K + +A +LL M G+ PD +TY L+ + K
Sbjct: 384 LIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Query: 176 -----------TNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEM 223
N+ ++ +L ++ ++ + + LC+ N A +M
Sbjct: 444 CGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKM 503
Query: 224 IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGEL 283
+ G P +YN +I + ++D + + + PD ++ CK +
Sbjct: 504 VNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR 563
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNL 343
+ AF + M E G+ P YS +I L Q R+ EA + F +ML G+ P E AY +
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 344 VGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGIL 403
+ Y G +A L +E++ K FL PS TY LI G +G +E+ L
Sbjct: 624 INTYARNGRIDEANELVEEVV-KHFL-------RPSSFTYTVLISGFVKMGMMEKGCQYL 675
Query: 404 RGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE 443
M E LSP+ V Y +I F K G+ +F L M E
Sbjct: 676 DKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGE 715
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 130/581 (22%), Positives = 229/581 (39%), Gaps = 67/581 (11%)
Query: 86 MVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRR 142
++ +G +P + + ++ + +R DEA L + P+ S + V+D LC + R
Sbjct: 122 VIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDR 181
Query: 143 IKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM-KQQRIPVPWTTY 201
EA +++ +G L + + +L AI + D + R+P+P Y
Sbjct: 182 FLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLN-EAIGMLDTLCGMTRMPLPVNLY 240
Query: 202 TSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
SL + C +A +F M G+ V Y L+ YC + + AM ++ M +
Sbjct: 241 KSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVE 300
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
R D I NTLI F K G L+K M ++M+++G+ N TY +I C + +
Sbjct: 301 RSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDY 360
Query: 321 AFDLFREMLGG-GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS-- 377
A LF G +S + Y NL+ + G KA L M+ G +PD +T F
Sbjct: 361 ALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLL 420
Query: 378 PSLVTYNALIYGNCLLGRV-EEALGILRGMAEMSLSP---DDVSYNIVISGFCKLGELGK 433
L + L Y +L + + GI +P DD+ NI + LGE+ +
Sbjct: 421 KMLPKCHELKYAMVILQSILDNGCGI---------NPPVIDDLG-NIEVKVESLLGEIAR 470
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEV-------------------NYNSVINA 474
+ + V LAV ++ + + + +YNSVI
Sbjct: 471 ---------KDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKC 521
Query: 475 YCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSL 534
E + L + ++ + Y+++ + KK R A +++ +L
Sbjct: 522 LFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKK-NDRDAAFAIIDAMEELGLRP 580
Query: 535 PTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIV 594
Y ++I + G +G EA +L+ +PD Y +I
Sbjct: 581 TVAIYSSIIGS---------------LGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 625
Query: 595 EHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVG 635
+ R +D+A + E+V + F+ LI +G
Sbjct: 626 TYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 182/455 (40%), Gaps = 74/455 (16%)
Query: 44 LKTTTTVSEMNRKGLDPARESL--IHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVL 101
+K + + E+ RK + A L + C Q A + +MVN G P +YN +
Sbjct: 459 VKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSV 518
Query: 102 LHAYCRDKRVDEA---MGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL 158
+ ++ +++ + I++ + P+V ++ V++ LC K A ++ M GL
Sbjct: 519 IKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGL 578
Query: 159 APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYK 218
P Y+++I ++ K +V +A +
Sbjct: 579 RPTVAIYSSIIGSLGKQGRVV-----------------------------------EAEE 603
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
F +M+ SG +P + Y +I+ Y R+ +A + + L P + LI+ F
Sbjct: 604 TFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV 663
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
K G +EK + +M+E G+ PN Y+ LI + +F LF M +
Sbjct: 664 KMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHI 723
Query: 339 AYFNLVGAYCLVGEFSKAFHL-----RDEMIH--------------------KGFLPDFV 373
AY L+ K + +++++ K F + +
Sbjct: 724 AYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVI 783
Query: 374 TEFS----PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+ P+L +N +I G C GR++EA L M + + P+ V+Y I++ + G
Sbjct: 784 GKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG 843
Query: 430 ELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSD 464
++ A +L G D ++S+L+KGL D
Sbjct: 844 DIESAIDLF-----EGTNCEPDQVMYSTLLKGLCD 873
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 150/372 (40%), Gaps = 49/372 (13%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQN----DNAYKVLSEMVNSGFLPSV 95
G +++ T ++M G+ P + + +++ + D A +++ E+V PS
Sbjct: 595 QGRVVEAEETFAKMLESGIQP--DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSS 652
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
TY VL+ + + +++ L M + PNVV + +I K K + L
Sbjct: 653 FTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGL 712
Query: 153 MNSKGLAPDSVTYNTLIT------AMSKNTNLVIR------------------------- 181
M + D + Y TL++ A K +++
Sbjct: 713 MGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGN 772
Query: 182 ------AIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTY 235
A+ + ++K+ IP + T + +D+AY M G P+LVTY
Sbjct: 773 YGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTY 832
Query: 236 NELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE 295
L+ ++ ++ A+ +F G PD V+ +TL+ C + A + EM +
Sbjct: 833 TILMKSHIEAGDIESAIDLFEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQK 889
Query: 296 RGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSK 355
GI PN D+Y KL+ CLC R EA + ++M + PR + L+ C + +
Sbjct: 890 SGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLRE 949
Query: 356 AFHLRDEMIHKG 367
A L M+ G
Sbjct: 950 ARALFAIMVQSG 961
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 202/509 (39%), Gaps = 61/509 (11%)
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ--MK 190
VIDG I EA + G+ DS Y LI +++ + A Y+Q +
Sbjct: 69 VIDG---SSSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGV-AETFYNQRVIG 124
Query: 191 QQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
+P + + L+ D+A +IASG+ PS + + ++ C +DR +
Sbjct: 125 NGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLE 184
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM--VERGILPNADTYSKL 308
A F + +RG C L C +G L +A M + + R LP + Y L
Sbjct: 185 AFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLP-VNLYKSL 243
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
C C + +EA LF M G + Y L+ YC + A L M+ + F
Sbjct: 244 FYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSF 303
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
E P + +N LI+G LG +++ + M + + + +Y+I+I +CK
Sbjct: 304 ------ELDPCI--FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKE 355
Query: 429 GELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVN-YNSVINAYCAEGEVSKALIL 487
G + A L V + G + +S V+ Y ++I + +G + KA+ L
Sbjct: 356 GNVDYALRLFV--NNTGS-------------EDISRNVHCYTNLIFGFYKKGGMDKAVDL 400
Query: 488 HDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCS 547
M +G + + Y +L K + A L + + C P +I++
Sbjct: 401 LMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINP-----PVIDDLG 455
Query: 548 NNEFKSVVELAKGFGMRGLKNEAA---SVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDK 604
N E K VE G R N AA +V+ T L C +RN
Sbjct: 456 NIEVK--VESLLGEIARKDANLAAVGLAVVTTAL------------------CSQRNYIA 495
Query: 605 AYNMYMEMVHYGFASHMFSVLALIKALFH 633
A + +MV+ G FS ++IK LF
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQ 524
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 168/372 (45%), Gaps = 38/372 (10%)
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
P VS N + L + +K A+ L ++ G P+ + +S+ LV AI
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFL---DTTGFKPEPTLLEQYVKCLSEE-GLVEEAIE 166
Query: 185 LYDQMKQQRIPVPWTTYTS-LIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
+Y+ +K I T S L+ L +D+ +++ EM+ S F+ + LI A C
Sbjct: 167 VYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRC--LIRALC 224
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
V + + + +GL P + LI+ FC+ G E+ M+ P+
Sbjct: 225 DGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMY 284
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
Y K+I LC ++ EA+ +F+ + G +P Y ++ +C G A L EM
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 364 IHKGFLPD----------------------FVTE-----FSPSLVTYNALIYGNCLLGRV 396
I KG P+ F E + ++++ N +I G C G+
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFS 456
+EA I + M+E ++P+ ++YN +I GFCK ++ K +L E+ +A G++ +A ++
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL-KALGLKPSGMA-YA 462
Query: 457 SLMKGL--SDEV 466
+L++ L SD V
Sbjct: 463 ALVRNLKMSDSV 474
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 151/338 (44%), Gaps = 15/338 (4%)
Query: 89 SGFLPSVATYNVLLHAYCRDKRVDEAM---GILRGMAVEPNVVSFNTVIDGLCAKRRIKE 145
+GF P + + V+EA+ +L+ M + +VV+ N+V+ G R++
Sbjct: 139 TGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDR 198
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI 205
EL +EM DS LI A+ + V L Q +Q + Y LI
Sbjct: 199 FWELHKEMVESEF--DSERIRCLIRALCDGGD-VSEGYELLKQGLKQGLDPGQYVYAKLI 255
Query: 206 HLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLT 264
C N +V MIA PS+ Y ++I C + +A IF+ + D+G
Sbjct: 256 SGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYA 315
Query: 265 PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
PD V+ T+I FC+ G L A ++ EM+++G+ PN Y+ +I + +S
Sbjct: 316 PDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAF 375
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
+ EML G + ++ +C G+ +AF + M G +P+ +TYN
Sbjct: 376 YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETG--------VTPNAITYN 427
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
ALI G C +VE+ L + + + + L P ++Y ++
Sbjct: 428 ALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 119/296 (40%), Gaps = 38/296 (12%)
Query: 52 EMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRV 111
EM D R + CD Y++L + + G P Y L+ +C
Sbjct: 205 EMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNY 264
Query: 112 DEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTL 168
+L M P++ + +I GLC ++ EA + + + KG APD V Y T+
Sbjct: 265 ACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTM 324
Query: 169 ITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGF 228
I + W + A K++ EMI G
Sbjct: 325 IRGFCEKG---------------------W--------------LGSARKLWFEMIKKGM 349
Query: 229 EPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFE 288
P+ YN +IH + R + + M G + CNT+I FC +G+ ++AFE
Sbjct: 350 RPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFE 409
Query: 289 MRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
+ M E G+ PNA TY+ LI C + ++ + L++E+ GL P AY LV
Sbjct: 410 IFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 153/417 (36%), Gaps = 78/417 (18%)
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
KA K F + +GF+P + + V++A+ ++ + D G++ V CN+++
Sbjct: 130 KAAKSFLD--TTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVL 187
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
K +L++ +E+ EMVE ++ S+ I CL
Sbjct: 188 LGCLKARKLDRFWELHKEMVE------SEFDSERIRCL---------------------- 219
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
+ A C G+ S+ + L + + +G P Y LI G C +G
Sbjct: 220 ---------IRALCDGGDVSEGYELLKQGLKQGL--------DPGQYVYAKLISGFCEIG 262
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAV 454
+L M + P Y +I G C + +A+ + + + G
Sbjct: 263 NYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYA------- 315
Query: 455 FSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKA 514
D V Y ++I +C +G + A L EM G Y ++ G K+
Sbjct: 316 --------PDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRG 367
Query: 515 RTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVL 574
SL+ FY+ ++ N S + KGF G +EA +
Sbjct: 368 EI-----SLVEAFYN-----------EMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIF 411
Query: 575 NTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKAL 631
+ + P+ YN LI C+ V+K +Y E+ G + AL++ L
Sbjct: 412 KNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 40/240 (16%)
Query: 55 RKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVD 112
++GLDP + L+ C+ +VL M+ PS+ Y ++ C +K+
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQL 300
Query: 113 EAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLI 169
EA I + + P+ V + T+I G C K + A +L EM KG+ P+ YN +I
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 170 --------------------------TAMSKNTNL--------VIRAIALYDQMKQQRIP 195
T +S NT + A ++ M + +
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 196 VPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
TY +LI C N V+K K++ E+ A G +PS + Y L+ D V ++ +
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 124/324 (38%), Gaps = 67/324 (20%)
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLL--GRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
GF P+ P+L+ Y CL G VEEA+ + + +M +S V+ N V+ G
Sbjct: 140 GFKPE------PTLLEQ----YVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLG 189
Query: 425 FCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKA 484
K +L + +EL EM E+ D +I A C G+VS+
Sbjct: 190 CLKARKLDRFWELHKEMVESE-----------------FDSERIRCLIRALCDGGDVSEG 232
Query: 485 LILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPT-FTYDTLI 543
L + G +Y L GF + E L M P+ + Y +I
Sbjct: 233 YELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMI--AWNHFPSMYIYQKII 290
Query: 544 EN-CSNNE-------FKSVVE------------LAKGFGMRGLKNEAASVLNTVLQWNYK 583
+ C N + FK++ + + +GF +G A + +++ +
Sbjct: 291 KGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMR 350
Query: 584 PDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRV 643
P+ YN +I H +R + Y EM+ G+ M S +IK G+ +E
Sbjct: 351 PNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDE---- 406
Query: 644 IQNVLRSCNINGFELHKALSETGV 667
FE+ K +SETGV
Sbjct: 407 -----------AFEIFKNMSETGV 419
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 161/360 (44%), Gaps = 14/360 (3%)
Query: 90 GFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEA 146
G V +Y+V+L A R K M +L+GM E P++ +D ++ A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 147 EELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
EL +E S G+ + ++N L+ + + ++ V A ++++ K+ IP +Y +I
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSH-VSAAKSVFNA-KKGNIPFDSCSYNIMIS 263
Query: 207 LLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
V++ KV EM+ SGF P ++Y+ LI R+ D++ IF + +G P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
DA + N +I F + +++ M++ PN +TYSKL+ L R++S+A ++F
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 326 REMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNA 385
EML G+ P + + C G A + + G ++E + L+
Sbjct: 384 EEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCR---ISESAYKLLLKRL 440
Query: 386 LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+G C + L + M E D Y ++ G C +G L A +M E G
Sbjct: 441 SRFGKCGM-----LLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKG 495
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 5/249 (2%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVS---FNTVIDGL 137
KVL EMV SGF P +Y+ L+ R R+++++ I + + NV +N +I
Sbjct: 276 KVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNF 335
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
+ R E+ + M + P+ TY+ L++ + K V A+ ++++M + +
Sbjct: 336 ISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRK-VSDALEIFEEMLSRGVLPT 394
Query: 198 WTTYTSLIHLLCTYNVDKAYKV-FTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
TS + LC+Y A V + + +G S Y L+ + + ++
Sbjct: 395 TGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWD 454
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
M + G D + ++ C G LE A + E + +G PN YS+L L
Sbjct: 455 EMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASN 514
Query: 317 RLSEAFDLF 325
+ A+ LF
Sbjct: 515 KTELAYKLF 523
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 157/405 (38%), Gaps = 58/405 (14%)
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G + +Y+ ++ A R M + +GM G+ PD + F + + +A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN-LVG 345
E+ E G+ + ++++ L+ CLC + +S A +F G P + +N ++
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGN--IPFDSCSYNIMIS 263
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
+ +GE + + EM+ GF P ++Y+ LI G GR+ +++ I
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGF--------GPDCLSYSHLIEGLGRTGRINDSVEIFDN 315
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM-DEAGGIRGVDLAVFSSLMKGLSD 464
+ PD YN +I F + ++ M DE +L +S L+ GL
Sbjct: 316 IKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECE---PNLETYSKLVSGL-- 370
Query: 465 EVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLL 524
+VS AL + +EM G L T G S L
Sbjct: 371 -----------IKGRKVSDALEIFEEMLSRGVLP-----------------TTGLVTSFL 402
Query: 525 RMFYDLCTSLPTFTYDTLIENC-------SNNEFKSVVELAKGFGMRGLKNEAASVLNTV 577
+ LC+ P + + S + +K +++ FG G+ +V + +
Sbjct: 403 K---PLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGM---LLNVWDEM 456
Query: 578 LQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMF 622
+ Y D VY +++ C +++ A + E + GF + F
Sbjct: 457 QESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF 501
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 165/358 (46%), Gaps = 17/358 (4%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMAVEP---NVVSFNTVIDGLCAKRRIKEAEELL 150
SV+TY+ + + K V +A+ I + + E NV N+++ L ++ +L
Sbjct: 131 SVSTYSSCI-KFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLF 189
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT 210
+M GL PD VTYNTL+ K N +AI L ++ I + Y +++ +C
Sbjct: 190 DQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVL-AICA 248
Query: 211 YN--VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
N ++A +M G P++ Y+ L+++Y + + A + M GL P+ V
Sbjct: 249 SNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKV 308
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
+ TL+ + K G +++ E+ +E+ G N Y L+D L +L EA +F +M
Sbjct: 309 MMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDM 368
Query: 329 LGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSP-SLVTYNALI 387
G G+ YA ++ A C F +A K D T + LV N ++
Sbjct: 369 KGKGVRSDGYANSIMISALCRSKRFKEA---------KELSRDSETTYEKCDLVMLNTML 419
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
C G +E + +++ M E ++SPD +++I+I F K A++ ++M G
Sbjct: 420 CAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 156/389 (40%), Gaps = 55/389 (14%)
Query: 183 IALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAY 242
I L++ M QQ + +TY+S I + NV KA +++ + + ++ N ++
Sbjct: 118 IQLFEWM-QQHGKISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCL 176
Query: 243 CCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE-LEKAFEMRAEMVERGILPN 301
++ + +F M GL PD V NTL+ K KA E+ E+ GI +
Sbjct: 177 VKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMD 236
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
+ Y ++ R EA + ++M G SP Y Y +L+ +Y G++ KA L
Sbjct: 237 SVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMT 296
Query: 362 EMIHKGFLP----------------------DFVTEFSPSLVTYNALIYGNCLL------ 393
EM G +P + ++E + N + Y C+L
Sbjct: 297 EMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPY--CMLMDGLSK 354
Query: 394 -GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
G++EEA I M + D + +I+IS C+ +A EL D DL
Sbjct: 355 AGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL--SRDSETTYEKCDL 412
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
+ N+++ AYC GE+ + + +M+ + +L F K
Sbjct: 413 VML-------------NTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK 459
Query: 513 KARTRGAKESLL-------RMFYDLCTSL 534
+ A ++ L R+ +LC+SL
Sbjct: 460 EKLHLLAYQTTLDMHSKGHRLEEELCSSL 488
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 7/290 (2%)
Query: 42 GLLKTTTTVSEMNRKG--LDPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYN 99
G K + E+ G +D + +C +++ A + +M G P++ Y+
Sbjct: 217 GYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYS 276
Query: 100 VLLHAYCRD---KRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
LL++Y K+ DE M ++ + + PN V T++ + ELL E+ S
Sbjct: 277 SLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESA 336
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKA 216
G A + + Y L+ +SK L A +++D MK + + + +I LC K
Sbjct: 337 GYAENEMPYCMLMDGLSKAGKLE-EARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKE 395
Query: 217 YKVFTEMIASGFEP-SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
K + + +E LV N ++ AYC ++ M + + M ++ ++PD + LI
Sbjct: 396 AKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIK 455
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
+F K A++ +M +G + S LI L R +EAF ++
Sbjct: 456 YFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVY 505
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 41/273 (15%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK--------------------------- 109
D+ K+ +M G P V TYN LL + K
Sbjct: 183 DSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGT 242
Query: 110 ---------RVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
R +EA ++ M VE PN+ ++++++ K K+A+EL+ EM S G
Sbjct: 243 VLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIG 302
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKA 216
L P+ V TL+ K L R+ L +++ Y L+ L +++A
Sbjct: 303 LVPNKVMMTTLLKVYIKG-GLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEA 361
Query: 217 YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
+F +M G + +I A C R ++A + R D V+ NT++
Sbjct: 362 RSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCA 421
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+C+ GE+E M +M E+ + P+ +T+ LI
Sbjct: 422 YCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 199/438 (45%), Gaps = 43/438 (9%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYC---RDKRVDEAMGIL---RGMAVEPNVVSF 130
++A + L +M G P+ +TYN L+ Y + +R E + ++ + V PN+ +F
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ-- 188
N ++ C K++++EA E++++M G+ PD+VTYNT+ T + V + ++
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 189 MKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRV 248
MK++ P T + V + M E +LV +N LI+ + V
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV---EV 308
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAE----MVERGILPNADT 304
D GI D V L+ F + EL +M+ + M E + + T
Sbjct: 309 MDRDGI-----------DEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVIT 357
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
YS +++ + +A +F+EM+ G+ P +AY L Y E KA L
Sbjct: 358 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL----- 412
Query: 365 HKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
L + E P++V + +I G C G +++A+ + M + +SP+ ++ ++ G
Sbjct: 413 ----LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 468
Query: 425 FCKLGELGKAFELMVEMDEAGGIRGVD----LAVFSSLMKGLSDEVNYNSVINAY-CAEG 479
+ ++ + KA E++ +M G++ + L + + GL+DE N INA C +
Sbjct: 469 YLEVKQPWKAEEVL-QMMRGCGVKPENSTFLLLAEAWRVAGLTDE--SNKAINALKCKDI 525
Query: 480 EVSKALILHDEMEHHGSL 497
E++K L+ + S
Sbjct: 526 EIAKLEKLYQKQSSGSSF 543
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/492 (20%), Positives = 205/492 (41%), Gaps = 81/492 (16%)
Query: 33 SEPKKVT----SGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMVN 88
SEP++ T +GG + + E + +R L+++L ++ + A V +
Sbjct: 15 SEPERSTPIKTTGGQYRFCKSCVEGSSCRTVRSRTKLMNVLI-ERGRPHEAQTVFKTLAE 73
Query: 89 SGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKE 145
+G PS+ +Y LL A K+ I+ + + + + FN VI+ +++
Sbjct: 74 TGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMED 133
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI 205
A + L +M GL P + TYNTLI R+ L D M ++
Sbjct: 134 AVQALLKMKELGLNPTTSTYNTLIKGYGI-AGKPERSSELLDLMLEEG------------ 180
Query: 206 HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
NVD P++ T+N L+ A+C + +V++A + + M + G+ P
Sbjct: 181 ------NVDVG-------------PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGIL-----PNADTYSKLIDCLCPQRRLSE 320
D V NT+ T + + GE +A +E+VE+ ++ PN T ++ C + R+ +
Sbjct: 222 DTVTYNTIATCYVQKGETVRA---ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRD 278
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYC---------------LVGEFSKAFHLRDEMIH 365
R M + + +L+ + L+ F++ L
Sbjct: 279 GLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKM 338
Query: 366 KGFLPDFVTE--FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS 423
K + + E ++TY+ ++ G +E+A + + M + + PD +Y+I+
Sbjct: 339 KVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAK 398
Query: 424 GFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSK 483
G+ + E KA EL+ + +++ + V + +VI+ +C+ G +
Sbjct: 399 GYVRAKEPKKAEELLETL----------------IVESRPNVVIFTTVISGWCSNGSMDD 442
Query: 484 ALILHDEMEHHG 495
A+ + ++M G
Sbjct: 443 AMRVFNKMCKFG 454
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 157/417 (37%), Gaps = 87/417 (20%)
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
+A VF + +G PSL++Y L+ A + + I + G D++ N +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
F + G +E A + +M E G+ P T
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTST------------------------------ 152
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
Y L+ Y + G+ ++ L D M+ +G + + P++ T+N L+ C
Sbjct: 153 -----YNTLIKGYGIAGKPERSSELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKK 202
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE---MDEAGGIRGVD 451
+VEEA +++ M E + PD V+YN + + + + GE +A +VE M E G
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
+ V+ YC EG V L M+ V++ L +GF
Sbjct: 263 CGI----------------VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 512 KKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAA 571
+ G E L + +++ +E N + K
Sbjct: 307 EVMDRDGIDEVTLTLLL--------MSFNEEVELVGNQKMK------------------V 340
Query: 572 SVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFA--SHMFSVLA 626
VL + + N K D Y+ ++ ++KA ++ EMV G +H +S+LA
Sbjct: 341 QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 397
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 165/360 (45%), Gaps = 17/360 (4%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVS-----FNTVIDG 136
+ ++ GF+ +V T+++L+ +C+ ++DEA LR A+ PN + ++D
Sbjct: 239 IFDQISVRGFVCAV-THSILVKKFCKQGKLDEAEDYLR--ALLPNDPAGCGSGLGILVDA 295
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
LC+KR+ +EA +LL E+ G YN I A+ K L A L + +
Sbjct: 296 LCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCEL 355
Query: 197 PWTTYTSLI-HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
Y S++ LL N+D Y + TEM+ G P+ T N + +C V +A+ ++
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
R + G P A+ N LI C +E+A+++ ++RG T+S L + LC +
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE 375
+ A +L L P+ A ++ A C VG+ A + +E+ +K +
Sbjct: 476 GKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMI-NELFNK-------SG 527
Query: 376 FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF 435
S + +LIYG+ L R + A ++ M E +P Y VI C++ K F
Sbjct: 528 VDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNF 587
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 169/436 (38%), Gaps = 66/436 (15%)
Query: 50 VSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
++EM +G+ P ++++ LC C D A ++ GF P+ +YN L+H C
Sbjct: 380 LTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCA 439
Query: 108 DKRVDEAMGILRGMAVEPNVV---SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
++ V++A +L+G + + +F+T+ + LC K + A EL+ + L P +
Sbjct: 440 NESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIA 499
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEM 223
+I+A+ + V A+ + + + + + +TSLI+ T D A K+ M
Sbjct: 500 GCKIISALC-DVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRM 558
Query: 224 IASGFEPSLVTYNELIHAYC--------------------CRDRVQ------DAMGIFRG 257
G+ P+ Y +I C +VQ + G F G
Sbjct: 559 QEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAG-FAG 617
Query: 258 MP----------DR-GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
P DR G+TP ++ + K ++ A ++ E+G Y
Sbjct: 618 KPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQ 676
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
+I LC +L +A EM G GL P Y + C ++ +A L
Sbjct: 677 VMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGL------- 729
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
V EF S A I GN LL ++ G+ M D I
Sbjct: 730 ------VNEFRKSGRRITAFI-GNVLLHNAMKSKGVYEAWTRMRNIEDK------IPEMK 776
Query: 427 KLGELGKAFELMVEMD 442
LGEL F ++M+
Sbjct: 777 SLGELIGLFSGRIDME 792
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 113/525 (21%), Positives = 194/525 (36%), Gaps = 95/525 (18%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG---MAVEPNVVSFNTV 133
D Y +L+EM+ G P+ T N L +C+ VDEA+ + R + P +S+N +
Sbjct: 374 DGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYL 433
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I LCA +++A ++L+ +G T++TL A+
Sbjct: 434 IHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALC-------------------- 473
Query: 194 IPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
W D A ++ P + ++I A C +V+DA+
Sbjct: 474 ----WKG-----------KPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALM 518
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGEL-----EKAFEMRAEMVERGILPNADTYSKL 308
I G+ + +LI YG + + A ++ M E+G P Y +
Sbjct: 519 INELFNKSGVDTSFKMFTSLI-----YGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNV 573
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREY---AYFNLVGAYCLVGEFSKAFHLRDEMIH 365
I C+C + F F +L LS E+ AY + G+ A + D M
Sbjct: 574 IQCVCEMESGEKNF--FTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDR 631
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLG-RVEEALGILRGMAEMSLSPDDVSYNIVISG 424
G P V N L+ + L ++ +AL + E + + Y ++I G
Sbjct: 632 DGITPT---------VASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVG 681
Query: 425 FCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNS---VINAYCAEGEV 481
CK +L A + EM G ++ + ++ L +E Y+ ++N + G
Sbjct: 682 LCKANKLDDAMHFLEEMKGEGLQPSIE--CYEVNIQKLCNEEKYDEAVGLVNEFRKSGRR 739
Query: 482 SKALI----LHDEMEHHGSLRASVL----------------YIMLFDG-FDKKARTRGAK 520
A I LH+ M+ G A I LF G D + +
Sbjct: 740 ITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGELIGLFSGRIDMEVELKRLD 799
Query: 521 ESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRG 565
E + + C L +TY+ L+ N+ + E+ + RG
Sbjct: 800 EVI-----EKCYPLDMYTYNMLLRMIVMNQAEDAYEMVERIARRG 839
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 6/266 (2%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEEL 149
P TYN+L+H + D+A+ + M V+P V+F T+I GLC R+KEA ++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 150 LQEM-NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI-HL 207
+M G+ P Y +LI A+ + L A L D+ + +I V Y++LI L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSF-AFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 208 LCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
+ ++ + EM G +P VTYN LI+ +C + + A + M ++GL PD
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
+ N ++ F + + E+A + +M RG P+ +Y + D LC + EA + E
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEF 353
ML G PR + C G+
Sbjct: 389 MLFKGYKPRRDRLEGFLQKLCESGKL 414
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 10/249 (4%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAM----GILRGMAVEPNVVSFNT 132
D+A K+ EMV P+ T+ L+H C+D RV EA+ +L+ V P V + +
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK--NTNLVIRAIALYDQMK 190
+I LC + A +L E + D+ Y+TLI+++ K +N V + ++M
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV---SMILEEMS 285
Query: 191 QQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
++ TY LI+ C N + A +V EM+ G +P +++YN ++ + + +
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWE 345
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+A +F MP RG +PD + + C+ + E+A + EM+ +G P D +
Sbjct: 346 EATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFL 405
Query: 310 DCLCPQRRL 318
LC +L
Sbjct: 406 QKLCESGKL 414
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
+P+ ++N +I G +A +L EM K + P VT+ TLI + K++ +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAY 242
+D +K + Y SLI LC + A+K+ E + Y+ LI +
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 243 CCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNA 302
R + I M ++G PD V N LI FC + E A + EMVE+G+ P+
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
+Y+ ++ ++ EA LF +M G SP +Y + C +F +A + DE
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 363 MIHKGFLP 370
M+ KG+ P
Sbjct: 389 MLFKGYKP 396
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 111/268 (41%), Gaps = 60/268 (22%)
Query: 279 KYGELEK----------------------------------AFEMRAEMVERGILPNADT 304
K GELEK A ++ EMV++ + P T
Sbjct: 130 KCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT 189
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGG-GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
+ LI LC R+ EA + +ML G+ P + Y +L+ A C +GE S AF L+DE
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS 423
+ + Y+ LI GR E IL M+E PD V+YN++I+
Sbjct: 250 --------YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLIN 301
Query: 424 GFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS-DEVNYNSVINAYCAEGEVS 482
GFC VE D R +D V KGL D ++YN ++ + +
Sbjct: 302 GFC------------VENDSESANRVLDEMV----EKGLKPDVISYNMILGVFFRIKKWE 345
Query: 483 KALILHDEMEHHGSLRASVLYIMLFDGF 510
+A L ++M G ++ Y ++FDG
Sbjct: 346 EATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 33/253 (13%)
Query: 373 VTEF-SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
+ EF P TYN LI+G G ++AL + M + + P V++ +I G CK +
Sbjct: 144 IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRV 203
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
+A ++ +M + G+R + +++SL+K L C GE+S A L DE
Sbjct: 204 KEALKMKHDMLKVYGVRPT-VHIYASLIKAL-------------CQIGELSFAFKLKDEA 249
Query: 492 EHHGSLRA-SVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNE 550
+ G ++ + +Y L K R+ L M C T TY+ LI
Sbjct: 250 -YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKP-DTVTYNVLI------- 300
Query: 551 FKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYM 610
GF + A VL+ +++ KPD YN ++ R + ++A ++
Sbjct: 301 --------NGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFE 352
Query: 611 EMVHYGFASHMFS 623
+M G + S
Sbjct: 353 DMPRRGCSPDTLS 365
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 125/536 (23%), Positives = 229/536 (42%), Gaps = 53/536 (9%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAM----GILRGMAVEPNVVSFNT 132
+ + ++L M N PS+ TYN +++A R E + +R ++P++V++NT
Sbjct: 193 ETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 252
Query: 133 VIDGLCAKRRI-KEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
++ CA R + EAE + + MN G+ PD TY+ L+ K L + L +M
Sbjct: 253 LLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE-KVCDLLGEMAS 310
Query: 192 QRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
T+Y L+ + ++ +A VF +M A+G P+ TY+ L++ + R D
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
+F M PDA N LI F + G ++ + +MVE I P+ +TY +I
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII- 429
Query: 311 CLCPQRRLSE-AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
C + L E A + + M + P AY ++ A+ + +A + M G
Sbjct: 430 FACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG-- 487
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+PS+ T+++L+Y G V+E+ IL + + + + ++N I + + G
Sbjct: 488 ------SNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGG 541
Query: 430 ELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHD 489
+ +A + V+M+++ + DE +V++ Y V + +
Sbjct: 542 KFEEAVKTYVDMEKS---------------RCDPDERTLEAVLSVYSFARLVDECREQFE 586
Query: 490 EMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNN 549
EM+ L + + Y M+ + K R E L M + +++ + + ++
Sbjct: 587 EMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDD 646
Query: 550 EFKSVVE--LAK------GFGMR------------GLKNEAASVLNTVLQWNYKPD 585
+VE L K G G+R G K AA VLN + P+
Sbjct: 647 SNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPE 702
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 176/424 (41%), Gaps = 32/424 (7%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
P+ Y +++ R+ +D+ + + M V +V S+ +I+ R + + EL
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
L M ++ ++P +TYNT+I A ++ + L+ +M+ + I TY +L+
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 210 TYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
+ D+A VF M G P L TY+ L+ + R++ + M G PD
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
N L+ + K G +++A + +M G PNA+TYS L++ R + LF EM
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 329 LGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIY 388
P Y L+ + G F + L +M+ + PD + TY +I+
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD--------METYEGIIF 430
Query: 389 GNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG---ELGKAFELMVEMDEAG 445
G E+A IL+ M + P +Y VI F + E AF M E+
Sbjct: 431 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 490
Query: 446 GIRGVDLAVFSSLMKGLSDEV-----------------NYNSVINAYCAEGEVSKALILH 488
I ++S GL E +N+ I AY G+ +A+ +
Sbjct: 491 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Query: 489 DEME 492
+ME
Sbjct: 551 VDME 554
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 205/489 (41%), Gaps = 47/489 (9%)
Query: 181 RAIALYDQMKQQRIPVP-WTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNEL 238
R++ L+ M++Q P YT +I LL + DK +VF EM + G S+ +Y L
Sbjct: 123 RSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTAL 182
Query: 239 IHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYG-ELEKAFEMRAEMVERG 297
I+AY R + ++ + M + ++P + NT+I + G + E + AEM G
Sbjct: 183 INAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEG 242
Query: 298 ILPNADTYSKLIDCLCPQRRL-SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
I P+ TY+ L+ C R L EA +FR M GG+ P Y +LV + + K
Sbjct: 243 IQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 357 FHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
L EM G LPD + +YN L+ G ++EA+G+ M +P+
Sbjct: 302 CDLLGEMASGGSLPD--------ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYC 476
+Y+++++ F + G +L +EM + D D YN +I +
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSN----TD-----------PDAATYNILIEVFG 398
Query: 477 AEGEVSKALIL-HDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP 535
G + + L HD +E + ++F A +G + D L
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETYEGIIF------ACGKGG------LHEDARKILQ 446
Query: 536 TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVE 595
T + ++ S+ + V+E FG L EA NT+ + P ++ L+
Sbjct: 447 YMTANDIVP--SSKAYTGVIE---AFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 501
Query: 596 HCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS-CNIN 654
R V ++ + +V G + + A I+A G+ E + ++ +S C+ +
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 561
Query: 655 GFELHKALS 663
L LS
Sbjct: 562 ERTLEAVLS 570
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 38/293 (12%)
Query: 394 GRVEEALGILRGMA-EMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
G + +L + + M ++ P++ Y I+IS + G L K E+ EM +GV
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPS----QGVSR 174
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
+VFS Y ++INAY G +L L D M++ + + Y + +
Sbjct: 175 SVFS-----------YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC-- 221
Query: 513 KARTRGAKESLLRMFYDL---CTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNE 569
AR E LL +F ++ TY+TL+ C+ +RGL +E
Sbjct: 222 -ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA---------------IRGLGDE 265
Query: 570 AASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIK 629
A V T+ PD Y+ L+ + R ++K ++ EM G + S L++
Sbjct: 266 AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLE 325
Query: 630 ALFHVGRHNEVRRVIQNVLRS-CNINGFELHKALSETGVIVREDKVKDVLLNV 681
A G E V + + C N L+ G R D V+ + L +
Sbjct: 326 AYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 162/369 (43%), Gaps = 14/369 (3%)
Query: 91 FLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAE 147
F S + ++ AY R EA M ++P V + ++ LC K+ + A+
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 148 ELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHL 207
E + G+ P + TY+ L+ ++ + A ++D+M ++ V Y +L+
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRD-ASGARKVFDEMLERNCVVDLLAYNALLDA 252
Query: 208 LC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPD 266
LC + +VD YK+F EM G +P ++ IHAYC V A + M L P+
Sbjct: 253 LCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN 312
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
N +I CK +++ A+ + EM+++G P+ TY+ ++ C ++ A L
Sbjct: 313 VYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLS 372
Query: 327 EMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNAL 386
M P + Y ++ +G F +A + + M + +F P++ TY +
Sbjct: 373 RMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSER--------KFYPTVATYTVM 424
Query: 387 IYGNCL-LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
I+G G++EEA M + + P + ++ + G++ L +M+ +
Sbjct: 425 IHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484
Query: 446 GIRGVDLAV 454
D+AV
Sbjct: 485 SCSVQDMAV 493
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 10/287 (3%)
Query: 57 GLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA 114
G+ P + L LL CD+ ++A + + G +PS TY++L+ + R + A
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 115 MGILRGMAVEPNVV----SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLIT 170
+ M +E N V ++N ++D LC + ++ QEM + GL PD+ ++ I
Sbjct: 228 RKVFDEM-LERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 171 AMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFE 229
A + V A + D+MK+ + T+ +I LC VD AY + EMI G
Sbjct: 287 AYCDAGD-VHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN 345
Query: 230 PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
P TYN ++ +C V A + M PD N ++ + G ++A E+
Sbjct: 346 PDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEI 405
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQR-RLSEAFDLFREMLGGGLSP 335
M ER P TY+ +I L ++ +L EA F M+ G+ P
Sbjct: 406 WEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 133/313 (42%), Gaps = 26/313 (8%)
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
+A + F M+ G +P + ++L+H+ C + V A F G+ P A + L+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+ + + A ++ EM+ER + + Y+ L+D LC + + +F+EM GL
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
P Y++ + AYC G+ A+ + D M +P+ + T+N +I C
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN--------VYTFNHIIKTLCKNE 327
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAV 454
+V++A +L M + +PD +YN +++ C E+ +A +L+ MD
Sbjct: 328 KVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRT---------- 377
Query: 455 FSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKA 514
K L D YN V+ G +A + + M Y ++ G
Sbjct: 378 -----KCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGL---V 429
Query: 515 RTRGAKESLLRMF 527
R +G E R F
Sbjct: 430 RKKGKLEEACRYF 442
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 6/219 (2%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNV 127
C D YK+ EM N G P ++ + +HAYC V A +L M + PNV
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
+FN +I LC ++ +A LL EM KG PD+ TYN+++ + V RA L
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE-VNRATKLLS 372
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M + + TY ++ LL D+A +++ M F P++ TY +IH +
Sbjct: 373 RMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKK 432
Query: 247 -RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
++++A F M D G+ P + L +G+++
Sbjct: 433 GKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 10/203 (4%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESL---IHLLCCDQLQNDNAYKVLSEMVNSGFLPSVA 96
SG + EM GL P S IH C D +AYKVL M +P+V
Sbjct: 256 SGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYC-DAGDVHSAYKVLDRMKRYDLVPNVY 314
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
T+N ++ C++++VD+A +L M P+ ++N+++ C + A +LL M
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-- 211
+ PD TYN ++ + + RA +++ M +++ TYT +IH L
Sbjct: 375 DRTKCLPDRHTYNMVLKLLIR-IGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 212 NVDKAYKVFTEMIASGFEPSLVT 234
+++A + F MI G P T
Sbjct: 434 KLEEACRYFEMMIDEGIPPYSTT 456
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 136/353 (38%), Gaps = 58/353 (16%)
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
++Y L++ L ++ + +D E REY YF + SK F +
Sbjct: 103 ESYHILVEILGSSKQFALLWDFLIE-------AREYNYFEIS---------SKVFWIVFR 146
Query: 363 MIHKGFLP-------DFVTEF--SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP 413
+ LP + + EF P + + L++ C V A + P
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 206
Query: 414 DDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVIN 473
+Y+I++ G+ ++ + A ++ EM E + VDL + YN++++
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCV--VDL-------------LAYNALLD 251
Query: 474 AYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM-FYDLCT 532
A C G+V + EM + G + + + + A + L RM YDL
Sbjct: 252 ALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVP 311
Query: 533 SLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFL 592
++ +T++ +I+ NE ++A +L+ ++Q PD YN +
Sbjct: 312 NV--YTFNHIIKTLCKNE---------------KVDDAYLLLDEMIQKGANPDTWTYNSI 354
Query: 593 IVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQ 645
+ HC V++A + M + ++K L +GR + + +
Sbjct: 355 MAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE 407
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 143 IKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ--RIPVPWTT 200
+KEA M PD YNT+I A+ + N +A L DQM+ R P T
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFK-KARFLLDQMQLPGFRYPPDTYT 239
Query: 201 YTSLIHLLCTYNVD------------KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRV 248
YT LI C Y + +A ++F EM+ GF P +VTYN LI C +R+
Sbjct: 240 YTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRI 299
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI-LPNADTYSK 307
A+ +F M +G P+ V N+ I ++ E+E A EM M + G +P + TY+
Sbjct: 300 GRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTP 359
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
LI L RR +EA DL EM+ GL PREY Y
Sbjct: 360 LIHALVETRRAAEARDLVVEMVEAGLVPREYTY 392
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 98/195 (50%), Gaps = 22/195 (11%)
Query: 61 ARESLIHLLCCDQLQN-DNAYKVLSEMVNSGFL--PSVATYNVLLHAYCR---------- 107
A ++I+ LC ++ N A +L +M GF P TY +L+ +YCR
Sbjct: 202 AYNTIINALC--RVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKA 259
Query: 108 -DKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSV 163
+R+ EA + R M P+VV++N +IDG C RI A EL ++M +KG P+ V
Sbjct: 260 IRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQV 319
Query: 164 TYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW-TTYTSLIHLLC-TYNVDKAYKVFT 221
TYN+ I S TN + AI + MK+ VP +TYT LIH L T +A +
Sbjct: 320 TYNSFIRYYSV-TNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVV 378
Query: 222 EMIASGFEPSLVTYN 236
EM+ +G P TY
Sbjct: 379 EMVEAGLVPREYTYK 393
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 109/280 (38%), Gaps = 36/280 (12%)
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK---LIDCLCPQRRL 318
G + + C + K + + ++ ++ R N T + L+ CL + +
Sbjct: 122 GFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFV 181
Query: 319 SEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSP 378
EA F M P YAY ++ A C VG F KA L D+M GF + P
Sbjct: 182 KEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGF------RYPP 235
Query: 379 SLVTYNALIYGNCLLG-----------RVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
TY LI C G R+ EA + R M PD V+YN +I G CK
Sbjct: 236 DTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCK 295
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALIL 487
+G+A EL +M G + ++V YNS I Y E+ A+ +
Sbjct: 296 TNRIGRALELFEDMKTKGCV---------------PNQVTYNSFIRYYSVTNEIEGAIEM 340
Query: 488 HDEMEHHG-SLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
M+ G + S Y L + R A++ ++ M
Sbjct: 341 MRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEM 380
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 102/280 (36%), Gaps = 70/280 (25%)
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL--PNADTY 305
V++A+ F M + PD NT+I C+ G +KA + +M G P+ TY
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 306 SKLIDCLCP-----------QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
+ LI C +RR+ EA +FR
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFR---------------------------- 272
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
EM+ +GF+PD +VTYN LI G C R+ AL + M P+
Sbjct: 273 -------EMLFRGFVPD--------VVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 415 DVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINA 474
V+YN I + E+ A E+M M + G G+ Y +I+A
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG--------------HGVPGSSTYTPLIHA 363
Query: 475 YCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKA 514
++A L EM G + Y ++ D +
Sbjct: 364 LVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 6/255 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR---VDEAMGILRG-MAVEPNVVSFNT 132
+NA KV EM N SV ++N LL AY K+ V+E L G ++++P++VS+NT
Sbjct: 126 ENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNT 185
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+I LC K + EA LL E+ +KGL PD VT+NTL+ + + ++ +M ++
Sbjct: 186 LIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL-GEEIWAKMVEK 244
Query: 193 RIPVPWTTYTS-LIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+ + TY + L+ L + +F E+ ASG +P + ++N +I ++ +A
Sbjct: 245 NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEA 304
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
++ + G PD L+ CK G+ E A E+ E + L T +L+D
Sbjct: 305 EAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDE 364
Query: 312 LCPQRRLSEAFDLFR 326
L + EA ++ +
Sbjct: 365 LVKGSKREEAEEIVK 379
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 130/290 (44%), Gaps = 29/290 (10%)
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQE------MNSKGLAPDSVTYNTLITAMSKNTNLV 179
N+ ++ + L A +R+ EE+L+E M+ +G A I ++ +
Sbjct: 73 NIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFA-------ARIISLYGKAGMF 125
Query: 180 IRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIAS-----GFEPSLVT 234
A ++++M + ++ +L L Y + K + V E+ +P +V+
Sbjct: 126 ENAQKVFEEMPNRDCKRSVLSFNAL---LSAYRLSKKFDVVEELFNELPGKLSIKPDIVS 182
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
YN LI A C +D + +A+ + + ++GL PD V NTL+ G+ E E+ A+MV
Sbjct: 183 YNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMV 242
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
E+ + + TY+ + L + + E +LF E+ GL P +++ ++ G+
Sbjct: 243 EKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMD 302
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILR 404
+A E++ G+ PD T+ L+ C G E A+ + +
Sbjct: 303 EAEAWYKEIVKHGYRPD--------KATFALLLPAMCKAGDFESAIELFK 344
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 140/371 (37%), Gaps = 79/371 (21%)
Query: 117 ILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN--SKGLAPDSVTYNTLITAMSK 174
+LRG +FNT C RR A ++ E + ++P + +L+ +
Sbjct: 7 VLRG--------TFNT-----CPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNG-ER 52
Query: 175 NTNLVIRA-------------IALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFT 221
N ++ IA+YD+ ++ + Y I + K +
Sbjct: 53 NPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEIL--------EEQKKYR 104
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYG 281
+M GF +++ Y ++A +F MP+R + N L++ +
Sbjct: 105 DMSKEGFAARIISL------YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY---- 154
Query: 282 ELEKAFEMRAEMVER-----GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
L K F++ E+ I P+ +Y+ LI LC + L EA L E+ GL P
Sbjct: 155 RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT---------------------- 374
+ L+ + L G+F + +M+ K D T
Sbjct: 215 IVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFG 274
Query: 375 -----EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
P + ++NA+I G+ G+++EA + + + PD ++ +++ CK G
Sbjct: 275 ELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
Query: 430 ELGKAFELMVE 440
+ A EL E
Sbjct: 335 DFESAIELFKE 345
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A +F EM ++ L+ AY L SK F + +E+ ++ LP ++ P +
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAYRL----SKKFDVVEELFNE--LPGKLS-IKPDI 180
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN-IVISGFCKLGELGKAFELMV 439
V+YN LI C + EA+ +L + L PD V++N +++S + K G+ E+
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK-GQFELGEEIWA 239
Query: 440 EMDEAGGIRGVDLAVFSSLMKGLSDEV----------------------NYNSVINAYCA 477
+M E +D+ +++ + GL++E ++N++I
Sbjct: 240 KMVEKNV--AIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 478 EGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGA----KESLLRMFYDLCTS 533
EG++ +A + E+ HG + +L K A KE+ + + T+
Sbjct: 298 EGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTT 357
Query: 534 LPTFTYDTLIENCSNNEFKSVVELAK 559
L D L++ E + +V++AK
Sbjct: 358 LQQLV-DELVKGSKREEAEEIVKIAK 382
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 150/335 (44%), Gaps = 50/335 (14%)
Query: 95 VATYNVLLHAYCRDKRVDEAMGIL--RGMAVEPNVVSFNTVIDGLC-AKRRIKEAEELLQ 151
+ + LL A CR K V +A ++ + SFN V++G C +EAE +
Sbjct: 232 IDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWM 291
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY 211
EM + G+ D V+Y+++I+ SK +L + + L+D+MK++ I
Sbjct: 292 EMGNVGVKHDVVSYSSMISCYSKGGSLN-KVLKLFDRMKKECI----------------- 333
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD-RGLTPDAVIC 270
EP YN ++HA V +A + + M + +G+ P+ V
Sbjct: 334 -----------------EPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTY 376
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
N+LI CK + E+A ++ EM+E+G+ P TY + L R E F+L +M
Sbjct: 377 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRK 433
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
G P Y L+ C +F L DEM K PD L +Y +I+G
Sbjct: 434 MGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPD--------LSSYIVMIHGL 485
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
L G++EEA G + M + + P++ +++ S F
Sbjct: 486 FLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWF 520
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 9/202 (4%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM----AVEPNVVSFNTVIDG 136
K+ M P YN ++HA + V EA +++ M +EPNVV++N++I
Sbjct: 323 KLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKP 382
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
LC R+ +EA+++ EM KGL P TY+ + + + L +M++
Sbjct: 383 LCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV----FELLAKMRKMGCEP 438
Query: 197 PWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
TY LI LC + + D ++ EM P L +Y +IH ++++A G +
Sbjct: 439 TVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYY 498
Query: 256 RGMPDRGLTPDAVICNTLITFF 277
+ M D+G+ P+ + + + ++F
Sbjct: 499 KEMKDKGMRPNENVEDMIQSWF 520
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 25 AAAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDP---ARESLIHLLCCDQLQNDNAYK 81
A A S SE + L+KT KG++P SLI LC + + A +
Sbjct: 346 ALAKASFVSEAR-----NLMKTME-----EEKGIEPNVVTYNSLIKPLC-KARKTEEAKQ 394
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKR 141
V EM+ G P++ TY+ + + V E + +R M EP V ++ +I LC R
Sbjct: 395 VFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWR 454
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
L EM K + PD +Y +I + N + A Y +MK +
Sbjct: 455 DFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGK-IEEAYGYYKEMKDK 504
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 165/459 (35%), Gaps = 89/459 (19%)
Query: 190 KQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNEL---IHAYCCR 245
KQQ Y S+I +L D A+ + EM F PSLV L I YC
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAV 210
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
V A+ F K F++ E GI D +
Sbjct: 211 HDVGKAINTFHAY--------------------------KRFKL-----EMGI----DDF 235
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV-GAYC-LVGEFSKAFHLRDEM 363
L+ LC + +S+A L P + FN+V +C ++G +A + EM
Sbjct: 236 QSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEM 293
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS 423
+ G D +V+Y+++I G + + L + M + + PD YN V+
Sbjct: 294 GNVGVKHD--------VVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVH 345
Query: 424 GFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSK 483
K + +A LM M+E GI + V YNS+I C + +
Sbjct: 346 ALAKASFVSEARNLMKTMEEEKGIE--------------PNVVTYNSLIKPLCKARKTEE 391
Query: 484 ALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLI 543
A + DEM G I + F + RT LL + TY LI
Sbjct: 392 AKQVFDEMLEKGLFPT----IRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLI 447
Query: 544 EN-CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNV 602
C +F +V+ L + + + PD + Y +I +
Sbjct: 448 RKLCRWRDFDNVLLL----------------WDEMKEKTVGPDLSSYIVMIHGLFLNGKI 491
Query: 603 DKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVR 641
++AY Y EM G + +V +I++ F ++ E R
Sbjct: 492 EEAYGYYKEMKDKGMRPNE-NVEDMIQSWFSGKQYAEQR 529
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 19/368 (5%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
+ A +VLS + G P+V +Y L+ +Y R + + A I R M EP+ +++ +
Sbjct: 156 NGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQII 215
Query: 134 IDGLCAKRRIKEAEE----LLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
+ + KEAEE LL E S L PD Y+ +I K N +A ++ M
Sbjct: 216 LKTFVEGDKFKEAEEVFETLLDEKKSP-LKPDQKMYHMMIYMYKKAGNYE-KARKVFSSM 273
Query: 190 KQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
+ +P TY SL+ +Y + K++ +M S +P +V+Y LI AY R +
Sbjct: 274 VGKGVPQSTVTYNSLMSFETSYK--EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 331
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+A+ +F M D G+ P N L+ F G +E+A + M I P+ +Y+ ++
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
+ A F+ + G P Y L+ Y + K + ++M G
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI- 450
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+ + +++T G C ALG + M + PD + N+++S
Sbjct: 451 -----KANQTILTTIMDASGRC--KNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 503
Query: 430 ELGKAFEL 437
EL +A EL
Sbjct: 504 ELEEAKEL 511
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 177/450 (39%), Gaps = 77/450 (17%)
Query: 177 NLVIRAIALYDQMKQQRIP---VPWTTYTS--------LIHLLCTY----NVDKAYKVFT 221
+LV+ + + Q+K+ + + W Y + + L+ Y N + A +V +
Sbjct: 104 DLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLS 163
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC--- 278
+ G P++++Y L+ +Y + +A IFR M G P A+ ++ F
Sbjct: 164 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 223
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
K+ E E+ FE + + + P+ Y +I +A +F M+G G+
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEE 398
Y +L+ E SK + D+M PD +V+Y LI R EE
Sbjct: 284 TYNSLMSFETSYKEVSKIY---DQMQRSDIQPD--------VVSYALLIKAYGRARREEE 332
Query: 399 ALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSL 458
AL + M + + P +YNI++ F G MVE + VF S+
Sbjct: 333 ALSVFEEMLDAGVRPTHKAYNILLDAFAISG--------MVEQAK---------TVFKSM 375
Query: 459 MKG--LSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK---- 512
+ D +Y ++++AY ++ A ++ G V Y L G+ K
Sbjct: 376 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 435
Query: 513 --------KARTRG--AKESLLRMFYDLCTSLPTF----TYDTLIENCS---NNEFKSVV 555
K R G A +++L D F + +E+C + + K+V+
Sbjct: 436 EKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVL 495
Query: 556 --------ELAKGFGMRGLKNEAASVLNTV 577
EL + + G++NE A+++ V
Sbjct: 496 LSLASTQDELEEAKELTGIRNETATIIARV 525
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFN 131
+ + A V EM+++G P+ YN+LL A+ V++A + + M + P++ S+
Sbjct: 329 REEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYT 388
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
T++ ++ AE+ + + G P+ VTY TLI +K N V + + +Y++M+
Sbjct: 389 TMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK-ANDVEKMMEVYEKMRL 447
Query: 192 QRIPVPWTTYTSLIHL--LCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
I T T+++ C N A + EM + G P N L+ +D ++
Sbjct: 448 SGIKANQTILTTIMDASGRCK-NFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELE 506
Query: 250 DA 251
+A
Sbjct: 507 EA 508
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 142/363 (39%), Gaps = 49/363 (13%)
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
LIT + K G A + + + + G PN +Y+ L++ + + A +FR M G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
P Y ++ + +F +A E + + L + + P Y+ +IY
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEA-----EEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
G E+A + M + V+YN ++S E+ K ++ M D
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ-------- 311
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD- 511
D V+Y +I AY +AL + +EM G Y +L D F
Sbjct: 312 ----------PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 512 ----KKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLK 567
++A+T R+F DL ++Y T++ N S +E A+ F R +K
Sbjct: 362 SGMVEQAKTVFKSMRRDRIFPDL------WSYTTMLSAYVN---ASDMEGAEKFFKR-IK 411
Query: 568 NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLAL 627
+ ++P+ Y LI + + +V+K +Y +M G ++ + +
Sbjct: 412 VDG-----------FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 460
Query: 628 IKA 630
+ A
Sbjct: 461 MDA 463
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 146/355 (41%), Gaps = 60/355 (16%)
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
E + L+ AY +G F+ A + + G +P++++Y AL+ G+
Sbjct: 139 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGS--------TPNVISYTALMESYGRGGKC 190
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFC---KLGELGKAFE----------------- 436
A I R M P ++Y I++ F K E + FE
Sbjct: 191 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 250
Query: 437 -LMVEMDEAGGIRGVDLAVFSSLM-KGLSDE-VNYNSVINAYCAEGEVSKALILHDEMEH 493
+M+ M + G VFSS++ KG+ V YNS+++ + EVSK ++D+M+
Sbjct: 251 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQR 307
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS--LPTF-TYDTLIENCSNNE 550
V Y +L + + R +E L +F ++ + PT Y+ L++
Sbjct: 308 SDIQPDVVSYALLIKAYGRARR----EEEALSVFEEMLDAGVRPTHKAYNILLD------ 357
Query: 551 FKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYM 610
F + G+ +A +V ++ + PD Y ++ + +++ A +
Sbjct: 358 ---------AFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 408
Query: 611 EMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFELHKALSET 665
+ GF ++ + LIK + N+V ++++ V ++G + ++ + T
Sbjct: 409 RIKVDGFEPNIVTYGTLIKGY---AKANDVEKMME-VYEKMRLSGIKANQTILTT 459
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 202/436 (46%), Gaps = 42/436 (9%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLC 138
A+ V E+ G + YN+LL A +D++ + ++ + ++ +I +
Sbjct: 222 AFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMG 281
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW 198
+ EA L EM ++GL + V YNTL+ ++K +V +AI ++ +M +
Sbjct: 282 RIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG-KMVDKAIQVFSRMVETGCRPNE 340
Query: 199 TTYTSLIHLLCT----YNVDKAYKVFTEMIASGFEPSLV-TYNELIHAYCCRDRVQDAMG 253
TY+ L++LL +D ++ + G LV T ++L H V +A
Sbjct: 341 YTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGH-------VSEAHR 393
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
+F M + + +++ C G+ +A EM +++ E+G++ + Y+ + L
Sbjct: 394 LFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALG 453
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
+++S DLF +M G SP + Y L+ ++ VGE +A ++ +E+
Sbjct: 454 KLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER-------- 505
Query: 374 TEFSPSLVTYNALIYGNCL--LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
++ P +++YN+LI NCL G V+EA + M E L+PD V+Y+ ++ F K +
Sbjct: 506 SDCKPDIISYNSLI--NCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE-VNYNSVINAYCAEGEVSKALILHDE 490
A+ L EM L+KG V YN +++ G ++A+ L+ +
Sbjct: 564 EMAYSLFEEM----------------LVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSK 607
Query: 491 MEHHGSLRASVLYIML 506
M+ G S+ Y +L
Sbjct: 608 MKQQGLTPDSITYTVL 623
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 37/300 (12%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR----------------- 119
D A +V S MV +G P+ TY++LL+ + ++ G++
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRT 381
Query: 120 ------------------GMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPD 161
V+ S+ ++++ LC + EA E+L +++ KG+ D
Sbjct: 382 LSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTD 441
Query: 162 SVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVF 220
++ YNT+ +A+ K + L+++MK+ TY LI VD+A +F
Sbjct: 442 TMMYNTVFSALGK-LKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 500
Query: 221 TEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKY 280
E+ S +P +++YN LI+ V +A F+ M ++GL PD V +TL+ F K
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 281 GELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
+E A+ + EM+ +G PN TY+ L+DCL R +EA DL+ +M GL+P Y
Sbjct: 561 ERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 163/354 (46%), Gaps = 26/354 (7%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D A + +EM+ G +V YN L+ + K VD+A+ + M PN +++ +
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLL 346
Query: 134 IDGLCAKR---RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
++ L A+ R+ E+ + ++G+ Y+ L+ +SK + V A L+ M
Sbjct: 347 LNLLVAEGQLVRLDGVVEISKRYMTQGI------YSYLVRTLSKLGH-VSEAHRLFCDMW 399
Query: 191 QQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
+ +Y S++ LC +A ++ +++ G + YN + A ++
Sbjct: 400 SFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQIS 459
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+F M G +PD N LI F + GE+++A + E+ P+ +Y+ LI
Sbjct: 460 HIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLI 519
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
+CL + EA F+EM GL+P Y L+ + A+ L +EM+ KG
Sbjct: 520 NCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG-- 577
Query: 370 PDFVTEFSPSLVTYNALIYGNCLL--GRVEEALGILRGMAEMSLSPDDVSYNIV 421
P++VTYN L+ +CL GR EA+ + M + L+PD ++Y ++
Sbjct: 578 ------CQPNIVTYNILL--DCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/548 (20%), Positives = 208/548 (37%), Gaps = 109/548 (19%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDG 136
D +L MV S +++T N+L+ + + + + +++ ++ N ++ ++
Sbjct: 153 DRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQA 212
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
R +A ++ E+ G D YN L+ A++K+ +A +++ MK++
Sbjct: 213 YLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDE----KACQVFEDMKKRHCRR 268
Query: 197 PWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
TYT +I + + +A+G+F
Sbjct: 269 DEYTYTIMIRTMGRIG----------------------------------KCDEAVGLFN 294
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
M GLT + V NTL+ K ++KA ++ + MVE G PN TYS L++ L +
Sbjct: 295 EMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
Query: 317 RL--------------------------------SEAFDLFREMLGGGLSPREYAYFNLV 344
+L SEA LF +M + +Y +++
Sbjct: 355 QLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSML 414
Query: 345 GAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILR 404
+ C G+ +A + ++ KG + D + YN + L ++ +
Sbjct: 415 ESLCGAGKTIEAIEMLSKIHEKGVVTD--------TMMYNTVFSALGKLKQISHIHDLFE 466
Query: 405 GMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSD 464
M + SPD +YNI+I+ F ++GE+ +A + E++ + D
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD---------------CKPD 511
Query: 465 EVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLL 524
++YNS+IN G+V +A + EM+ G V Y L + F K R A
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFE 571
Query: 525 RMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKP 584
M C TY+ L++ N G EA + + + Q P
Sbjct: 572 EMLVKGCQP-NIVTYNILLDCLEKN---------------GRTAEAVDLYSKMKQQGLTP 615
Query: 585 DGAVYNFL 592
D Y L
Sbjct: 616 DSITYTVL 623
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 38/202 (18%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFN 131
Q + + + +M G P + TYN+L+ ++ R VDEA+ I + +P+++S+N
Sbjct: 457 QISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYN 516
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
++I+ L + EA +EM KGL PD VTY+TL+ K
Sbjct: 517 SLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGK----------------- 559
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
T V+ AY +F EM+ G +P++VTYN L+ R +A
Sbjct: 560 ------------------TERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601
Query: 252 MGIFRGMPDRGLTPDAVICNTL 273
+ ++ M +GLTPD++ L
Sbjct: 602 VDLYSKMKQQGLTPDSITYTVL 623
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D A + E+ S P + +YN L++ ++ VDEA + M + P+VV+++T+
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
++ R++ A L +EM KG P+ VTYN L+ + KN A+ LY +MKQQ
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGR-TAEAVDLYSKMKQQG 612
Query: 194 IPVPWTTYTSLIHL 207
+ TYT L L
Sbjct: 613 LTPDSITYTVLERL 626
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/514 (19%), Positives = 206/514 (40%), Gaps = 74/514 (14%)
Query: 145 EAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSL 204
EA E+L+ +NS LA + + S+N + I L + + +P +
Sbjct: 101 EASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILI--LSRSNLPDRF------ 152
Query: 205 IHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLT 264
D+ + M+ S ++ T N LI + +D R + L
Sbjct: 153 ---------DRVRSILDSMVKSNVHGNISTVNILIGFF---GNTEDLQMCLRLVKKWDLK 200
Query: 265 PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
++ L+ + + + KAF++ E+ G + Y+ L+D L + A +
Sbjct: 201 MNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQV 257
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
F +M EY Y ++ +G+ +A L +EMI +G + ++V YN
Sbjct: 258 FEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGL--------TLNVVGYN 309
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA 444
L+ V++A+ + M E P++ +Y+++++ G+L + + +VE+ +
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVR-LDGVVEISK- 367
Query: 445 GGIRGVDLAVFSSLMKGLS----------------------DEVNYNSVINAYCAEGEVS 482
R + ++S L++ LS + +Y S++ + C G+
Sbjct: 368 ---RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 483 KALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTL 542
+A+ + ++ G + +++Y +F K + + +M D S FTY+ L
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD-GPSPDIFTYNIL 483
Query: 543 IENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNV 602
I + FG G +EA ++ + + + KPD YN LI + +V
Sbjct: 484 IAS---------------FGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 603 DKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
D+A+ + EM G + + L++ R
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 160/368 (43%), Gaps = 19/368 (5%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
+ A +VLS + G P+V +Y L+ +Y R + + A I R M EP+ +++ +
Sbjct: 163 NGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQII 222
Query: 134 IDGLCAKRRIKEAEE----LLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
+ + KEAEE LL E S L PD Y+ +I K N +A ++ M
Sbjct: 223 LKTFVEGDKFKEAEEVFETLLDEKKSP-LKPDQKMYHMMIYMYKKAGNYE-KARKVFSSM 280
Query: 190 KQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
+ +P TY SL+ +Y + K++ +M S +P +V+Y LI AY R +
Sbjct: 281 VGKGVPQSTVTYNSLMSFETSYK--EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREE 338
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+A+ +F M D G+ P N L+ F G +E+A + M I P+ +Y+ ++
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
+ A F+ + G P Y L+ Y + K + ++M G
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI- 457
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+ + +++T G C ALG + M + PD + N+++S
Sbjct: 458 -----KANQTILTTIMDASGRC--KNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 510
Query: 430 ELGKAFEL 437
EL +A EL
Sbjct: 511 ELEEAKEL 518
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 177/450 (39%), Gaps = 77/450 (17%)
Query: 177 NLVIRAIALYDQMKQQRIP---VPWTTYTS--------LIHLLCTY----NVDKAYKVFT 221
+LV+ + + Q+K+ + + W Y + + L+ Y N + A +V +
Sbjct: 111 DLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLS 170
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC--- 278
+ G P++++Y L+ +Y + +A IFR M G P A+ ++ F
Sbjct: 171 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 230
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
K+ E E+ FE + + + P+ Y +I +A +F M+G G+
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEE 398
Y +L+ E SK + D+M PD +V+Y LI R EE
Sbjct: 291 TYNSLMSFETSYKEVSKIY---DQMQRSDIQPD--------VVSYALLIKAYGRARREEE 339
Query: 399 ALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSL 458
AL + M + + P +YNI++ F G MVE + VF S+
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISG--------MVEQAK---------TVFKSM 382
Query: 459 MKG--LSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK---- 512
+ D +Y ++++AY ++ A ++ G V Y L G+ K
Sbjct: 383 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 442
Query: 513 --------KARTRG--AKESLLRMFYDLCTSLPTF----TYDTLIENCS---NNEFKSVV 555
K R G A +++L D F + +E+C + + K+V+
Sbjct: 443 EKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVL 502
Query: 556 --------ELAKGFGMRGLKNEAASVLNTV 577
EL + + G++NE A+++ V
Sbjct: 503 LSLASTQDELEEAKELTGIRNETATIIARV 532
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFN 131
+ + A V EM+++G P+ YN+LL A+ V++A + + M + P++ S+
Sbjct: 336 REEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYT 395
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
T++ ++ AE+ + + G P+ VTY TLI +K N V + + +Y++M+
Sbjct: 396 TMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK-ANDVEKMMEVYEKMRL 454
Query: 192 QRIPVPWTTYTSLIHL--LCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
I T T+++ C N A + EM + G P N L+ +D ++
Sbjct: 455 SGIKANQTILTTIMDASGRCK-NFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELE 513
Query: 250 DA 251
+A
Sbjct: 514 EA 515
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 142/363 (39%), Gaps = 49/363 (13%)
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
LIT + K G A + + + + G PN +Y+ L++ + + A +FR M G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
P Y ++ + +F +A E + + L + + P Y+ +IY
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEA-----EEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
G E+A + M + V+YN ++S E+ K ++ M D
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ-------- 318
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD- 511
D V+Y +I AY +AL + +EM G Y +L D F
Sbjct: 319 ----------PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 368
Query: 512 ----KKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLK 567
++A+T R+F DL ++Y T++ N S +E A+ F R +K
Sbjct: 369 SGMVEQAKTVFKSMRRDRIFPDL------WSYTTMLSAYVN---ASDMEGAEKFFKR-IK 418
Query: 568 NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLAL 627
+ ++P+ Y LI + + +V+K +Y +M G ++ + +
Sbjct: 419 VDG-----------FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 467
Query: 628 IKA 630
+ A
Sbjct: 468 MDA 470
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 146/355 (41%), Gaps = 60/355 (16%)
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
E + L+ AY +G F+ A + + G +P++++Y AL+ G+
Sbjct: 146 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGS--------TPNVISYTALMESYGRGGKC 197
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFC---KLGELGKAFE----------------- 436
A I R M P ++Y I++ F K E + FE
Sbjct: 198 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 257
Query: 437 -LMVEMDEAGGIRGVDLAVFSSLM-KGLSDE-VNYNSVINAYCAEGEVSKALILHDEMEH 493
+M+ M + G VFSS++ KG+ V YNS+++ + EVSK ++D+M+
Sbjct: 258 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQR 314
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS--LPTF-TYDTLIENCSNNE 550
V Y +L + + R +E L +F ++ + PT Y+ L++
Sbjct: 315 SDIQPDVVSYALLIKAYGRARR----EEEALSVFEEMLDAGVRPTHKAYNILLD------ 364
Query: 551 FKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYM 610
F + G+ +A +V ++ + PD Y ++ + +++ A +
Sbjct: 365 ---------AFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 415
Query: 611 EMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFELHKALSET 665
+ GF ++ + LIK + N+V ++++ V ++G + ++ + T
Sbjct: 416 RIKVDGFEPNIVTYGTLIKGY---AKANDVEKMME-VYEKMRLSGIKANQTILTT 466
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 186/417 (44%), Gaps = 34/417 (8%)
Query: 88 NSGFLPSVATYNVLLHAYCRDKRVDEA----MGILRGMAVEPNVVSFNTVIDGLCAKRRI 143
S F P V +N+L+ AY + + EA + +L V P ++ +I C I
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDTYALLIKAYCMAGLI 228
Query: 144 KEAEELLQEMNSKGLAPDSV---TYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT 200
+ AE +L EM + ++P ++ YN I + K AI ++ +MK+ R T
Sbjct: 229 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 288
Query: 201 YTSLIHLLCTYNVD-KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
Y +I+L + ++K++ EM + +P++ TY L++A+ + A IF +
Sbjct: 289 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 348
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
+ GL PD + N L+ + + G A E+ + M G P+ +Y+ ++D S
Sbjct: 349 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
+A +F EM G++P ++ L+ AY + +K + EM G PD +
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD-------T 461
Query: 380 LVTYNAL-IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
V + L +YG LG+ + IL M + D +YNI+I+ + K G L + EL
Sbjct: 462 FVLNSMLNLYGR--LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 519
Query: 439 VEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
VE+ E R D V + S I AY + K L + +EM G
Sbjct: 520 VELKEK-NFR--------------PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 171/385 (44%), Gaps = 23/385 (5%)
Query: 72 DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVV 128
+ Q A + +++ S ++P+ TY +L+ AYC ++ A +L M V P +
Sbjct: 189 QKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTI 248
Query: 129 S---FNTVIDGLCAKR-RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
+N I+GL ++ +EA ++ Q M P + TYN +I K + + +
Sbjct: 249 GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYM-SWK 307
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
LY +M+ + TYT+L++ + +KA ++F ++ G EP + YN L+ +Y
Sbjct: 308 LYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 367
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
A IF M G PD N ++ + + G A + EM GI P
Sbjct: 368 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 427
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
++ L+ R +++ + +EM G+ P + +++ Y +G+F+K + EM
Sbjct: 428 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487
Query: 364 IHKGFLPDFVTEFSPSLVTYNAL--IYGNC-LLGRVEEALGILRGMAEMSLSPDDVSYNI 420
+ D + TYN L IYG L R+EE L+ E + PD V++
Sbjct: 488 ENGPCTAD--------ISTYNILINIYGKAGFLERIEELFVELK---EKNFRPDVVTWTS 536
Query: 421 VISGFCKLGELGKAFELMVEMDEAG 445
I + + K E+ EM ++G
Sbjct: 537 RIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 5/300 (1%)
Query: 76 NDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNT 132
+ A V M P+ TYN++++ Y + + + + +R +PN+ ++
Sbjct: 267 TEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTA 326
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+++ + ++AEE+ +++ GL PD YN L+ + S+ A ++ M+
Sbjct: 327 LVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR-AGYPYGAAEIFSLMQHM 385
Query: 193 RIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+Y ++ + A VF EM G P++ ++ L+ AY V
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 445
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
I + M + G+ PD + N+++ + + G+ K ++ AEM + TY+ LI+
Sbjct: 446 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
L +LF E+ P + + +GAY + K + +EMI G PD
Sbjct: 506 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 565
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 111/259 (42%), Gaps = 5/259 (1%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR---VDEAMGILRGMAVEPNVVSFNTV 133
+ A ++ ++ G P V YN L+ +Y R E +++ M EP+ S+N +
Sbjct: 338 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 397
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+D +AE + +EM G+AP ++ L++A SK + V + A+ +M +
Sbjct: 398 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD-VTKCEAIVKEMSENG 456
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ S+++L K K+ EM + TYN LI+ Y ++
Sbjct: 457 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 516
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+F + ++ PD V + I + + K E+ EM++ G P+ T L+
Sbjct: 517 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 576
Query: 313 CPQRRLSEAFDLFREMLGG 331
+ ++ + + R M G
Sbjct: 577 SSEEQVEQVTSVLRTMHKG 595
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 175/450 (38%), Gaps = 43/450 (9%)
Query: 211 YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV-- 268
+ +A ++ +++ S + P+ TY LI AYC ++ A + M + ++P +
Sbjct: 191 FQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGV 250
Query: 269 -ICNTLITFFCKY-GELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
+ N I K G E+A ++ M P +TY+ +I+ + ++ L+
Sbjct: 251 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 310
Query: 327 EMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNAL 386
EM P Y LV A+ G KA + +++ G PD + YNAL
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD--------VYVYNAL 362
Query: 387 IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGG 446
+ G A I M M PD SYNI++ + + G A + EM G
Sbjct: 363 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG- 421
Query: 447 IRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIML 506
+ MK ++ +++AY +V+K + EM +G + + +
Sbjct: 422 --------IAPTMK------SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 507 FDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGL 566
+ + + + ++ L M CT+ TY+ LI +G G
Sbjct: 468 LNLYGRLGQFTKMEKILAEMENGPCTA-DISTYNILINI---------------YGKAGF 511
Query: 567 KNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLA 626
+ + + N++PD + I + R++ K ++ EM+ G A +
Sbjct: 512 LERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKV 571
Query: 627 LIKALFHVGRHNEVRRVIQNVLRSCNINGF 656
L+ A + +V V++ + + ++
Sbjct: 572 LLSACSSEEQVEQVTSVLRTMHKGVTVSSL 601
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 124/334 (37%), Gaps = 76/334 (22%)
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P+ ++ LID + + EA L+ ++L P E Y L+ AYC+ G +A +
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL---GRVEEALGILRGMAEMSLSPDDV 416
EM + P + + YNA I G L+ G EEA+ + + M P
Sbjct: 235 LVEMQNHHVSPKTI-----GVTVYNAYIEG--LMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYC 476
+YN++I+ + K + +++L EM + Y +++NA+
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI---------------CTYTALVNAFA 332
Query: 477 AEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPT 536
EG KA + ++++ DG +
Sbjct: 333 REGLCEKAEEIFEQLQE--------------DGLEPD----------------------V 356
Query: 537 FTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEH 596
+ Y+ L+E+ + G AA + + + +PD A YN ++ +
Sbjct: 357 YVYNALMES---------------YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 401
Query: 597 CRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKA 630
R A ++ EM G A M S + L+ A
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 435
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 186/417 (44%), Gaps = 34/417 (8%)
Query: 88 NSGFLPSVATYNVLLHAYCRDKRVDEA----MGILRGMAVEPNVVSFNTVIDGLCAKRRI 143
S F P V +N+L+ AY + + EA + +L V P ++ +I C I
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDTYALLIKAYCMAGLI 206
Query: 144 KEAEELLQEMNSKGLAPDSV---TYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT 200
+ AE +L EM + ++P ++ YN I + K AI ++ +MK+ R T
Sbjct: 207 ERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTET 266
Query: 201 YTSLIHLLCTYNVD-KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
Y +I+L + ++K++ EM + +P++ TY L++A+ + A IF +
Sbjct: 267 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 326
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
+ GL PD + N L+ + + G A E+ + M G P+ +Y+ ++D S
Sbjct: 327 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
+A +F EM G++P ++ L+ AY + +K + EM G PD +
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD-------T 439
Query: 380 LVTYNAL-IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
V + L +YG LG+ + IL M + D +YNI+I+ + K G L + EL
Sbjct: 440 FVLNSMLNLYGR--LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 497
Query: 439 VEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
VE+ E R D V + S I AY + K L + +EM G
Sbjct: 498 VELKEK-NFR--------------PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 171/385 (44%), Gaps = 23/385 (5%)
Query: 72 DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVV 128
+ Q A + +++ S ++P+ TY +L+ AYC ++ A +L M V P +
Sbjct: 167 QKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTI 226
Query: 129 S---FNTVIDGLCAKR-RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
+N I+GL ++ +EA ++ Q M P + TYN +I K + + +
Sbjct: 227 GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYM-SWK 285
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
LY +M+ + TYT+L++ + +KA ++F ++ G EP + YN L+ +Y
Sbjct: 286 LYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 345
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
A IF M G PD N ++ + + G A + EM GI P
Sbjct: 346 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 405
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
++ L+ R +++ + +EM G+ P + +++ Y +G+F+K + EM
Sbjct: 406 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
Query: 364 IHKGFLPDFVTEFSPSLVTYNAL--IYGNC-LLGRVEEALGILRGMAEMSLSPDDVSYNI 420
+ D + TYN L IYG L R+EE L+ E + PD V++
Sbjct: 466 ENGPCTAD--------ISTYNILINIYGKAGFLERIEELFVELK---EKNFRPDVVTWTS 514
Query: 421 VISGFCKLGELGKAFELMVEMDEAG 445
I + + K E+ EM ++G
Sbjct: 515 RIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 5/300 (1%)
Query: 76 NDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNT 132
+ A V M P+ TYN++++ Y + + + + +R +PN+ ++
Sbjct: 245 TEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTA 304
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+++ + ++AEE+ +++ GL PD YN L+ + S+ A ++ M+
Sbjct: 305 LVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR-AGYPYGAAEIFSLMQHM 363
Query: 193 RIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+Y ++ + A VF EM G P++ ++ L+ AY V
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 423
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
I + M + G+ PD + N+++ + + G+ K ++ AEM + TY+ LI+
Sbjct: 424 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
L +LF E+ P + + +GAY + K + +EMI G PD
Sbjct: 484 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 543
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 111/259 (42%), Gaps = 5/259 (1%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR---VDEAMGILRGMAVEPNVVSFNTV 133
+ A ++ ++ G P V YN L+ +Y R E +++ M EP+ S+N +
Sbjct: 316 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+D +AE + +EM G+AP ++ L++A SK + V + A+ +M +
Sbjct: 376 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD-VTKCEAIVKEMSENG 434
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ S+++L K K+ EM + TYN LI+ Y ++
Sbjct: 435 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 494
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+F + ++ PD V + I + + K E+ EM++ G P+ T L+
Sbjct: 495 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 554
Query: 313 CPQRRLSEAFDLFREMLGG 331
+ ++ + + R M G
Sbjct: 555 SSEEQVEQVTSVLRTMHKG 573
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 175/450 (38%), Gaps = 43/450 (9%)
Query: 211 YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV-- 268
+ +A ++ +++ S + P+ TY LI AYC ++ A + M + ++P +
Sbjct: 169 FQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGV 228
Query: 269 -ICNTLITFFCK-YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
+ N I K G E+A ++ M P +TY+ +I+ + ++ L+
Sbjct: 229 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 288
Query: 327 EMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNAL 386
EM P Y LV A+ G KA + +++ G PD + YNAL
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD--------VYVYNAL 340
Query: 387 IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGG 446
+ G A I M M PD SYNI++ + + G A + EM G
Sbjct: 341 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG- 399
Query: 447 IRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIML 506
+ MK ++ +++AY +V+K + EM +G + + +
Sbjct: 400 --------IAPTMK------SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 507 FDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGL 566
+ + + + ++ L M CT+ TY+ LI +G G
Sbjct: 446 LNLYGRLGQFTKMEKILAEMENGPCTA-DISTYNILINI---------------YGKAGF 489
Query: 567 KNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLA 626
+ + + N++PD + I + R++ K ++ EM+ G A +
Sbjct: 490 LERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKV 549
Query: 627 LIKALFHVGRHNEVRRVIQNVLRSCNINGF 656
L+ A + +V V++ + + ++
Sbjct: 550 LLSACSSEEQVEQVTSVLRTMHKGVTVSSL 579
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 124/334 (37%), Gaps = 76/334 (22%)
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P+ ++ LID + + EA L+ ++L P E Y L+ AYC+ G +A +
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL---GRVEEALGILRGMAEMSLSPDDV 416
EM + P + + YNA I G L+ G EEA+ + + M P
Sbjct: 213 LVEMQNHHVSPKTI-----GVTVYNAYIEG--LMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYC 476
+YN++I+ + K + +++L EM + Y +++NA+
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI---------------CTYTALVNAFA 310
Query: 477 AEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPT 536
EG KA + ++++ DG +
Sbjct: 311 REGLCEKAEEIFEQLQE--------------DGLEPD----------------------V 334
Query: 537 FTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEH 596
+ Y+ L+E+ + G AA + + + +PD A YN ++ +
Sbjct: 335 YVYNALMES---------------YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Query: 597 CRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKA 630
R A ++ EM G A M S + L+ A
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSA 413
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 146/321 (45%), Gaps = 15/321 (4%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVID 135
A+ + +++ P+V YN +++ Y + +D+A+ + M E P+V +FN +I+
Sbjct: 179 AFDTMKRLIDGK--PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILIN 236
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
G C + A +L +EM KG P+ V++NTLI ++ + + + +M +
Sbjct: 237 GYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFL-SSGKIEEGVKMAYEMIELGCR 295
Query: 196 VPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
T L+ LC VD A + +++ PS Y L+ C ++ AM +
Sbjct: 296 FSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEM 355
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
+ +G TP + C TL+ K G EKA +M+ GILP++ T++ L+ LC
Sbjct: 356 MEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCS 415
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
++A L G P E Y LV + G + L +EM+ K LPD
Sbjct: 416 SDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPD--- 472
Query: 375 EFSPSLVTYNALIYGNCLLGR 395
+ TYN L+ G G+
Sbjct: 473 -----IFTYNRLMDGLSCTGK 488
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 133/299 (44%), Gaps = 23/299 (7%)
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++DKA + + M +P + T+N LI+ YC + A+ +FR M ++G P+ V N
Sbjct: 208 DMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFN 267
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
TLI F G++E+ +M EM+E G + T L+D LC + R+ +A L ++L
Sbjct: 268 TLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
+ P E+ Y +LV C + +A + +E+ KG P F + L+ G
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF--------IACTTLVEGLR 379
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
GR E+A G + M + PD V++N+++ C A L + G
Sbjct: 380 KSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG------ 433
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGF 510
DE Y+ +++ + EG + +L +EM L Y L DG
Sbjct: 434 ---------YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 158/366 (43%), Gaps = 49/366 (13%)
Query: 102 LHAYCRDKRVDEAM----GILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
+ AYCR +++D A+ + R + +PNV +NTV++G + +A Q M +
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAY 217
PD T+N LI +++ D A
Sbjct: 224 AKPDVCTFNILINGYCRSSKF-----------------------------------DLAL 248
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFF 277
+F EM G EP++V++N LI + ++++ + + M + G C L+
Sbjct: 249 DLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGL 308
Query: 278 CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
C+ G ++ A + +++ + +LP+ Y L++ LC + + A ++ E+ G +P
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF 368
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
A LV G KA ++M++ G LPD VT+N L+ C
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDS--------VTFNLLLRDLCSSDHST 420
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
+A + + PD+ +Y++++SGF K G + L+ EM + + D+ ++
Sbjct: 421 DANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDML--PDIFTYNR 478
Query: 458 LMKGLS 463
LM GLS
Sbjct: 479 LMDGLS 484
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 122/283 (43%), Gaps = 5/283 (1%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D A + M P V T+N+L++ YCR + D A+ + R M EPNVVSFNT+
Sbjct: 210 DKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTL 269
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I G + +I+E ++ EM G T L+ + + + + D + ++
Sbjct: 270 IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV 329
Query: 194 IPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+P + Y SL+ LC N +A ++ E+ G P + L+ R + A
Sbjct: 330 LPSEFD-YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKAS 388
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
G M + G+ PD+V N L+ C A +R +G P+ TY L+
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSK 355
+ R E L EML + P + Y L+ G+FS+
Sbjct: 449 TKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 131/331 (39%), Gaps = 52/331 (15%)
Query: 305 YSKLIDCLCPQRRLSEA---FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
+ ID C R++ A FD + ++ G P Y +V Y G+ KA
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 362 EMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIV 421
M + PD + T+N LI G C + + AL + R M E P+ VS+N +
Sbjct: 218 RMGKERAKPD--------VCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTL 269
Query: 422 ISGFCKLGELGKAFELMVEMDEAGG----------IRG------VDLA---VFSSLMKG- 461
I GF G++ + ++ EM E G + G VD A V L K
Sbjct: 270 IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV 329
Query: 462 LSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKE 521
L E +Y S++ C E + +A+ + +E+ G + L +G K RT A
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 522 SLLRM---------------FYDLCTSLPTFTYDTLIENCSNNEFK----SVVELAKGFG 562
+ +M DLC+S + + L S+ ++ + L GF
Sbjct: 390 FMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 563 MRGLKNEAASVLNTVLQWNYKPDGAVYNFLI 593
G + E ++N +L + PD YN L+
Sbjct: 450 KEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 132/282 (46%), Gaps = 8/282 (2%)
Query: 100 VLLHAYCRDKRVDEAMGILRGMAVE------PNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
VLL A C++ V EA L + P+V FN +++G R++K+AE+L +EM
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-N 212
+ + P VTY TLI + + I A+ + ++MK + + + + +I L
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQI-AMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+ +A + P++VTYN L+ +C + A I + M RG+ P N
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNH 395
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
+F K+ + E+ + +++E G P+ TY ++ LC +LS A + +EM G
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRG 455
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
+ P L+ C + +AF D + +G +P ++T
Sbjct: 456 IDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYIT 497
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVI 134
A K+ EM P+V TY L+ YCR +RV AM +L M + E N + FN +I
Sbjct: 268 QAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPII 327
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
DGL R+ EA +++ P VTYN+L+ K +L + L M +
Sbjct: 328 DGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVD 387
Query: 195 PVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
P TTY +N ++ ++ ++I +G P +TY+ ++ C ++ AM
Sbjct: 388 PTT-TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQ 446
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
+ + M +RG+ PD + LI C+ LE+AFE V RGI+P T+ K+ID
Sbjct: 447 VNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF-KMID 502
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 147/349 (42%), Gaps = 20/349 (5%)
Query: 92 LPSVATYNVLLHAYCRDKRVDEAMGILR-GMAVEPNVVS------FNTVIDGLCAKRRIK 144
L S T+ VL+ Y R V +A+ + EP S ++D LC + ++
Sbjct: 170 LVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVR 229
Query: 145 EAEELLQEMN---SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
EA L+ + P +N L+ ++ L +A L+++MK + TY
Sbjct: 230 EASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLK-QAEKLWEEMKAMNVKPTVVTY 288
Query: 202 TSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
+LI C V A +V EM + E + + +N +I R+ +A+G+
Sbjct: 289 GTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFV 348
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
P V N+L+ FCK G+L A ++ M+ RG+ P TY+ + E
Sbjct: 349 CESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEE 408
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
+L+ +++ G SP Y ++ C G+ S A + EM ++G PD L
Sbjct: 409 GMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPD--------L 460
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+T LI+ C L +EEA + P +++ ++ +G G
Sbjct: 461 LTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 158/386 (40%), Gaps = 38/386 (9%)
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
+EP+V + + D L + + + EM G +++++ ++ K I
Sbjct: 96 GIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKP-GFTLSPSLFDSVVNSLCKAREFEIA 154
Query: 182 AIALYDQMKQQRIP--VPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNEL 238
++D+++ V T+ LI V +A + F A +EP + EL
Sbjct: 155 WSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE--FARSYEPVCKSATEL 212
Query: 239 ------IHAYCCRDRVQDA-MGIFR--GMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
+ A C V++A M + R G D P I N L+ + + +L++A ++
Sbjct: 213 RLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKL 272
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL 349
EM + P TY LI+ C RR+ A ++ EM + + ++
Sbjct: 273 WEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGE 332
Query: 350 VGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEM 409
G S+A + + FV E P++VTYN+L+ C G + A IL+ M
Sbjct: 333 AGRLSEALGMMERF--------FVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTR 384
Query: 410 SLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYN 469
+ P +YN F K + + L ++ EAG D + Y+
Sbjct: 385 GVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHS---------------PDRLTYH 429
Query: 470 SVINAYCAEGEVSKALILHDEMEHHG 495
++ C +G++S A+ ++ EM++ G
Sbjct: 430 LILKMLCEDGKLSLAMQVNKEMKNRG 455
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 206/469 (43%), Gaps = 47/469 (10%)
Query: 1 MSPLLRAFRRHIVRNSGMTRGFTAAAAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDP 60
+ PL++ + V +S T + L + + + ++ ++ S ++ G++P
Sbjct: 40 VEPLIQRIQSPAVPDSTCTPPQQNTVSKTDLSTISNLLENTDVVPGSSLESALDETGIEP 99
Query: 61 ARESLIHLLCCDQLQND-----NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAM 115
+ E L+H L D+L + + +K +EM GF S + ++ ++++ C+ + + A
Sbjct: 100 SVE-LVHALF-DRLSSSPMLLHSVFK-WAEM-KPGFTLSPSLFDSVVNSLCKAREFEIAW 155
Query: 116 GIL--RGMAVE-PNVVSFNTVIDGLCAKRRIKEAEELLQEMNS----KGLAP--DSVT-- 164
++ R + E N+VS +T I RR A + Q + + + P S T
Sbjct: 156 SLVFDRVRSDEGSNLVSADTFI---VLIRRYARAGMVQQAIRAFEFARSYEPVCKSATEL 212
Query: 165 --YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-----TYNVDKAY 217
L+ A+ K + +R ++Y + + W + ++L + + +A
Sbjct: 213 RLLEVLLDALCKEGH--VREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAE 270
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFF 277
K++ EM A +P++VTY LI YC RVQ AM + M + + ++ N +I
Sbjct: 271 KLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGL 330
Query: 278 CKYGELEKAFEM--RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSP 335
+ G L +A M R + E G P TY+ L+ C L A + + M+ G+ P
Sbjct: 331 GEAGRLSEALGMMERFFVCESG--PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDP 388
Query: 336 REYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGR 395
Y + + + + +L ++I G SP +TY+ ++ C G+
Sbjct: 389 TTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH--------SPDRLTYHLILKMLCEDGK 440
Query: 396 VEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA 444
+ A+ + + M + PD ++ ++I C+L L +AFE E D A
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE---EFDNA 486
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 175/457 (38%), Gaps = 89/457 (19%)
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
Q+ V T +++ +LL +V + + + +G EPS+ EL+HA DR+ +
Sbjct: 61 QQNTVSKTDLSTISNLLENTDVVPGSSLESALDETGIEPSV----ELVHALF--DRLSSS 114
Query: 252 ----MGIFRGMPDR-GLTPDAVICNTLITFFCKYGELEKAFEM---RAEMVERGILPNAD 303
+F+ + G T + ++++ CK E E A+ + R E L +AD
Sbjct: 115 PMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSAD 174
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
T+ LI R YA +V EF++++
Sbjct: 175 TFIVLI--------------------------RRYARAGMVQQAIRAFEFARSY------ 202
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEA---LGILRGMAEMSLSPDDVSYNI 420
+ V + + L L+ C G V EA L + G + + P +NI
Sbjct: 203 -------EPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNI 255
Query: 421 VISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGE 480
+++G+ + +L +A +L EM M V Y ++I YC
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEM---------------KAMNVKPTVVTYGTLIEGYCRMRR 300
Query: 481 VSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTF-TY 539
V A+ + +EM+ +++ + DG + R A + R F +C S PT TY
Sbjct: 301 VQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFF--VCESGPTIVTY 358
Query: 540 DTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRR 599
++L++N K + G A+ +L ++ P YN +
Sbjct: 359 NSLVKN-----------FCKAGDLPG----ASKILKMMMTRGVDPTTTTYNHFFKYFSKH 403
Query: 600 RNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGR 636
++ N+Y +++ G + + ++K L G+
Sbjct: 404 NKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 182/379 (48%), Gaps = 43/379 (11%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVIDGLCAKRRIKEAEELL 150
+++++N +L +Y + VD+A+G+L M + +P++V++N+++ G +K K+A +L
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVI-RAIALYDQMKQQRIPVPWTTYTSLIHL-L 208
+ M GL P + + ++L+ A+++ +L + +AI Y Q V T+LI + +
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDV--YVETTLIDMYI 271
Query: 209 CTYNVDKAYKVFTEMIASGFEPSLVTYNELIH--AYCCRDRVQDAMGIFRGMPDRGLTPD 266
T + A VF M A ++V +N L+ +Y C ++DA + M G+ PD
Sbjct: 272 KTGYLPYARMVFDMMDA----KNIVAWNSLVSGLSYACL--LKDAEALMIRMEKEGIKPD 325
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
A+ N+L + + G+ EKA ++ +M E+G+ PN +++ + A +F
Sbjct: 326 AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 327 EMLGGGLSPRE---YAYFNLVGAYCLV--GEFSKAFHLRDEMIHKGFLPDFVTEF----- 376
+M G+ P ++G L+ G+ F LR +I ++ + +
Sbjct: 386 KMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG 445
Query: 377 -------------SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS 423
+ SL ++N ++ G + GR EE + M E + PD +++ V+S
Sbjct: 446 DLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Query: 424 GFCK----LGELGKAFELM 438
CK + E K F+LM
Sbjct: 506 -VCKNSGLVQEGWKYFDLM 523
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 138/314 (43%), Gaps = 38/314 (12%)
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW----TTYTSLIHLLCTYN 212
GL + N+LI S+N L + + +++ MK + + W ++YT L +
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLEL-SRKVFNSMKDRNLS-SWNSILSSYTKLGY------ 170
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
VD A + EM G +P +VT+N L+ Y + +DA+ + + M GL P ++
Sbjct: 171 VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISS 230
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
L+ + G L+ + ++ + + + LID L A +F M
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK- 289
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRD------EMIHKGFLPDFVTEFSPSLVTYNAL 386
N+V LV S A L+D M +G PD +T+N+L
Sbjct: 290 ---------NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPD--------AITWNSL 332
Query: 387 IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGG 446
G LG+ E+AL ++ M E ++P+ VS+ + SG K G A ++ ++M E G
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG- 391
Query: 447 IRGVDLAVFSSLMK 460
G + A S+L+K
Sbjct: 392 -VGPNAATMSTLLK 404
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 149/374 (39%), Gaps = 51/374 (13%)
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
+F MP R D + N ++ + G EKA E+ EM G T KL+
Sbjct: 45 LFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCS 100
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
+ +E + +L GL +L+ Y G+ + + + M +
Sbjct: 101 NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR------- 153
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
+L ++N+++ LG V++A+G+L M L PD V++N ++SG+ G
Sbjct: 154 -----NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKD 208
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
A ++ M AG + SSL++ +++ + G+ IL +++ +
Sbjct: 209 AIAVLKRMQIAG--LKPSTSSISSLLQAVAEP--------GHLKLGKAIHGYILRNQLWY 258
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKS 553
+ +++ + + G+ A RM +D+ + +++L+
Sbjct: 259 DVYVETTLIDMYIKTGYLPYA----------RMVFDMMDAKNIVAWNSLVS--------- 299
Query: 554 VVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMV 613
G L +A +++ + + KPD +N L + +KA ++ +M
Sbjct: 300 ------GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 353
Query: 614 HYGFASHMFSVLAL 627
G A ++ S A+
Sbjct: 354 EKGVAPNVVSWTAI 367
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 149/330 (45%), Gaps = 13/330 (3%)
Query: 101 LLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
L+ Y + VD+A+ + + + S NT+I+ L +++A+
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKA 216
L P+SV++N LI + A ++D+M + + TY SLI LC ++ KA
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEA-ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 217 YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
+ +MI P+ VT+ L+ CC+ +A + M RG P V L++
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
K G +++A + EM +R I P+ Y+ L++ LC + R+ EA+ + EM G P
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
Y ++ +C + +F ++ + M+ + P+ T+ ++ G G +
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAML--------ASRHCPTPATFVCMVAGLIKGGNL 412
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFC 426
+ A +L M + +LS ++ ++S C
Sbjct: 413 DHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 5/284 (1%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG---MAVEPNVVSFNTV 133
D A V ++ + + ++ + N L++ + +++A G M + PN VSFN +
Sbjct: 133 DKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNIL 192
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I G K + A ++ EM + P VTYN+LI + +N ++ +A +L + M ++R
Sbjct: 193 IKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG-KAKSLLEDMIKKR 251
Query: 194 IPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
I T+ L+ L C ++A K+ +M G +P LV Y L+ R R+ +A
Sbjct: 252 IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK 311
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M R + PD VI N L+ C + +A+ + EM +G PNA TY +ID
Sbjct: 312 LLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA 356
C ++ ML P + +V G A
Sbjct: 372 CRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 415
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 122/255 (47%), Gaps = 23/255 (9%)
Query: 72 DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVV 128
D+ + A KV EM+ PSV TYN L+ CR+ + +A +L M + PN V
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAV 257
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
+F ++ GLC K EA++L+ +M +G P V Y L++ + K + A L +
Sbjct: 258 TFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGR-IDEAKLLLGE 316
Query: 189 MKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
MK++RI Y L++ LCT V +AY+V TEM G +P+ TY +I +C R
Sbjct: 317 MKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFC---R 373
Query: 248 VQD---------AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
++D AM R P TP +C ++ K G L+ A + M ++ +
Sbjct: 374 IEDFDSGLNVLNAMLASRHCP----TPATFVC--MVAGLIKGGNLDHACFVLEVMGKKNL 427
Query: 299 LPNADTYSKLIDCLC 313
+ + L+ LC
Sbjct: 428 SFGSGAWQNLLSDLC 442
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 150/362 (41%), Gaps = 13/362 (3%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR---VDEAMGILRGMAVEPNVVSFNTV 133
+ A + + GF +Y+ L++ + + VD+ + ++R V F +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I + +A ++ ++ S + NTLI + N L +A + +D K R
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELE-KAKSFFDGAKDMR 181
Query: 194 IPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ ++ LI L + + A KVF EM+ +PS+VTYN LI C D + A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M + + P+AV L+ C GE +A ++ +M RG P Y L+ L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
+ R+ EA L EM + P Y LV C +A+ + EM KG
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC---- 357
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
P+ TY +I G C + + L +L M P ++ +++G K G L
Sbjct: 358 ----KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLD 413
Query: 433 KA 434
A
Sbjct: 414 HA 415
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 140/328 (42%), Gaps = 33/328 (10%)
Query: 144 KEAEELLQEMNSKGLAPDSVTYNTLI--TAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
+EA L + G D +Y++LI A S+N + V + + L ++ + + + +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRL---VRYRNVRCRESLF 119
Query: 202 TSLI-HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
LI H +VDKA VF ++ + ++ + N LI+ ++ A F G D
Sbjct: 120 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
L P++V N LI F + E A ++ EM+E + P+ TY+ LI LC + +
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK 239
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT------ 374
A L +M+ + P + L+ C GE+++A L +M ++G P V
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 375 ---------------------EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP 413
P +V YN L+ C RV EA +L M P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 414 DDVSYNIVISGFCKLGELGKAFELMVEM 441
+ +Y ++I GFC++ + ++ M
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAM 387
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 140/337 (41%), Gaps = 34/337 (10%)
Query: 197 PWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG-IF 255
PW L L + ++A +F + GF +Y+ LI+ + R DA+ I
Sbjct: 46 PWEEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLA-KSRNFDAVDQIL 104
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
R + R + + LI + K G ++KA ++ ++ + + + LI+ L
Sbjct: 105 RLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDN 164
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE 375
L +A F L P ++ L+ + ++ A + DEM+ E
Sbjct: 165 GELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE--------ME 216
Query: 376 FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF 435
PS+VTYN+LI C + +A +L M + + P+ V++ +++ G C GE +A
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 436 ELMVEMDEAGGIRGVDLAVFSSLMKGLS----------------------DEVNYNSVIN 473
+LM +M+ G G L + LM L D V YN ++N
Sbjct: 277 KLMFDMEYRGCKPG--LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Query: 474 AYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGF 510
C E V +A + EM+ G + Y M+ DGF
Sbjct: 335 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 134/340 (39%), Gaps = 53/340 (15%)
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNL 343
E+A + + E G + +YS LI L R + R + + RE + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 344 VGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS--PSLVTYNALIYGNCLL--GRVEEA 399
+ Y G KA ++ HK +T F ++ + N LI N L+ G +E+A
Sbjct: 123 IQHYGKAGSVDKAI----DVFHK------ITSFDCVRTIQSLNTLI--NVLVDNGELEKA 170
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGF---CKLGELGKAFELMVEMDEAGGIRGVDLAVFS 456
G +M L P+ VS+NI+I GF C K F+ M+EM+ +
Sbjct: 171 KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV--------- 221
Query: 457 SLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKART 516
V YNS+I C ++ KA L ++M +V + +L G K
Sbjct: 222 ---------VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 517 RGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNT 576
AK+ + M Y C Y L+ + G RG +EA +L
Sbjct: 273 NEAKKLMFDMEYRGCKP-GLVNYGILMSD---------------LGKRGRIDEAKLLLGE 316
Query: 577 VLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYG 616
+ + KPD +YN L+ C V +AY + EM G
Sbjct: 317 MKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 31 LESEPKKVTSGGLL----------KTTTTVSEMNRKGLDPARES---LIHLLCCDQLQND 77
+E +P VT L+ K + + +M +K + P + L+ LCC N+
Sbjct: 215 MEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNE 274
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA---MGILRGMAVEPNVVSFNTVI 134
A K++ +M G P + Y +L+ + R+DEA +G ++ ++P+VV +N ++
Sbjct: 275 -AKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILV 333
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
+ LC + R+ EA +L EM KG P++ TY +I + + L + +
Sbjct: 334 NHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHC 393
Query: 195 PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
P P T + L+ N+D A V M + L+ C +D
Sbjct: 394 PTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKD 445
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 161/374 (43%), Gaps = 54/374 (14%)
Query: 80 YKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL---RGMAVEPNVVSFNTVIDG 136
++V EM + TY VLL+ Y +VDEA+G+ + ++ ++V+F+ ++
Sbjct: 163 HQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMW 222
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
LC + ++ AE TL + + I+A+ +
Sbjct: 223 LCRYKHVEFAE-------------------TLFCSRRREFGCDIKAMNM----------- 252
Query: 197 PWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
+++ C NV +A + + ++IAS P +V+Y +I+A + ++ AM ++
Sbjct: 253 -------ILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
R M D PD ICN +I C + +A E+ E+ E+G PN TY+ L+ LC
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 316 RRLSEAFDLFREM--LGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
RR + ++L EM GG SP + + L+ + SK + E + K
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLK----YSQRSKDVDIVLERMAKN-----K 416
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
E + L YN + + E+ I M L PD +Y I I G G++G+
Sbjct: 417 CEMTSDL--YNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGE 474
Query: 434 AFELMVEMDEAGGI 447
A EM G +
Sbjct: 475 ALSYFQEMMSKGMV 488
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 105/196 (53%), Gaps = 14/196 (7%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVID 135
A ++ M ++ P V N ++ A C KR+ EA+ + R ++ +PNVV++N+++
Sbjct: 301 AMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLK 360
Query: 136 GLCAKRRIKEAEELLQEMNSKG--LAPDSVTYNTLI--TAMSKNTNLVIRAIALYDQMKQ 191
LC RR ++ EL++EM KG +P+ VT++ L+ + SK+ ++V+ ++M +
Sbjct: 361 HLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVL------ERMAK 414
Query: 192 QRIPVPWTTYTSLIHLLCTYNVD-KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
+ + Y + L ++ + K ++++EM SG P TY IH + ++ +
Sbjct: 415 NKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGE 474
Query: 251 AMGIFRGMPDRGLTPD 266
A+ F+ M +G+ P+
Sbjct: 475 ALSYFQEMMSKGMVPE 490
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 9/244 (3%)
Query: 217 YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
++VF EM + TY L++ Y +V +A+G+F + G+ D V + L+ +
Sbjct: 163 HQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMW 222
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
C+Y +E A + R + + +++ C + EA +++++ P
Sbjct: 223 LCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPD 281
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
+Y ++ A G+ KA L M + T +P + N +I C R+
Sbjct: 282 VVSYGTMINALTKKGKLGKAMELYRAM--------WDTRRNPDVKICNNVIDALCFKKRI 333
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFS 456
EAL + R ++E P+ V+YN ++ CK+ K +EL+ EM+ GG + FS
Sbjct: 334 PEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFS 393
Query: 457 SLMK 460
L+K
Sbjct: 394 YLLK 397
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 31/278 (11%)
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR 326
+++ N ++ K E+ ++ EM +R N TY L++ ++ EA +F
Sbjct: 143 SMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFE 202
Query: 327 EMLGGGLSPREYAYFNLVGAYCLVG--EFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
G+ A+ L+ C EF++ EF + N
Sbjct: 203 RRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRR-----------REFGCDIKAMN 251
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA 444
++ G C+LG V EA + + PD VSY +I+ K G+LGKA EL M +
Sbjct: 252 MILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDT 311
Query: 445 GGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYI 504
R D+ + N+VI+A C + + +AL + E+ G V Y
Sbjct: 312 R--RNPDVKIC-------------NNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYN 356
Query: 505 MLFDGFDKKARTRGAKESLLRMFYDLCTSLP---TFTY 539
L K RT E + M + P TF+Y
Sbjct: 357 SLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSY 394
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 132/294 (44%), Gaps = 48/294 (16%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM----AVEPNVVSFNT 132
D A +VL+EM G + TYNVLL YC+ ++D A +LR M +EP+VVS+N
Sbjct: 469 DRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNI 528
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLIT--AMSKNTNLVIRAIALYDQ-M 189
+IDG A EM ++G+AP ++Y TL+ AMS L R ++D+ M
Sbjct: 529 IIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANR---VFDEMM 585
Query: 190 KQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRV 248
R+ V + L+ C ++ A +V + M +GF P++ TY L + +
Sbjct: 586 NDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKP 645
Query: 249 QDAMGIFRGMPDRG-------------------LTPDAVICNTLITFFCKYGELEKAFEM 289
DA+ +++ + +R L PD + +TL + +KA E+
Sbjct: 646 GDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEI 705
Query: 290 RAEMVERGILPNADTYSKL------------------IDCLCPQRRLSEAFDLF 325
A M E GI PN Y K+ ID ++R +EAF +
Sbjct: 706 IACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFW 759
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 15/241 (6%)
Query: 228 FEPSLVTYNELIHAYCCRDRVQDAMGIFRGM---PDRGLTPDAVICNTLITFFCKYGELE 284
F P Y L+ Y RV D + M DR PD V T+++ F G ++
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML-GGGLSPREYAYFNL 343
+A ++ AEM G+ N TY+ L+ C Q ++ A DL REM G+ P +Y +
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 344 VGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGIL 403
+ L+ + + A +EM +G +P+ ++Y L+ + G+ + A +
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRG--------IAPTKISYTTLMKAFAMSGQPKLANRVF 581
Query: 404 -RGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
M + + D +++N+++ G+C+LG + A ++ M E G V A + SL G+
Sbjct: 582 DEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV--ATYGSLANGV 639
Query: 463 S 463
S
Sbjct: 640 S 640
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 10/247 (4%)
Query: 91 FLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE------PNVVSFNTVIDGLCAKRRIK 144
F P Y L+ Y ++ RV + +L M + P+ V++ TV+ +
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 145 EAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSL 204
A ++L EM G+ + +TYN L+ K + RA L +M + P ++
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQ-IDRAEDLLREMTEDAGIEPDVVSYNI 528
Query: 205 IHLLCTYNVDKA--YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF-RGMPDR 261
I C D A F EM G P+ ++Y L+ A+ + + A +F M D
Sbjct: 529 IIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDP 588
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
+ D + N L+ +C+ G +E A + + M E G PN TY L + + R+ +A
Sbjct: 589 RVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDA 648
Query: 322 FDLFREM 328
L++E+
Sbjct: 649 LLLWKEI 655
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 127/307 (41%), Gaps = 18/307 (5%)
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ--RIPVP-WTTYTSLIHLLCTYN 212
K APDS Y TL+ KN + A L + M++Q R P TYT+++
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARML-EAMRRQDDRNSHPDEVTYTTVVSAFVNAG 466
Query: 213 V-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP-DRGLTPDAVIC 270
+ D+A +V EM G + +TYN L+ YC + ++ A + R M D G+ PD V
Sbjct: 467 LMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSY 526
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
N +I + A EM RGI P +Y+ L+ + A +F EM+
Sbjct: 527 NIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN 586
Query: 331 GGLSPREYAYFN-LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYG 389
+ +N LV YC +G A + M GF P+ T S + A G
Sbjct: 587 DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPG 646
Query: 390 NCLL--GRVEEALGILRGMAEMS---------LSPDDVSYNIVISGFCKLGELGKAFELM 438
+ LL ++E + + A L PD+ + + + KA E++
Sbjct: 647 DALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEII 706
Query: 439 VEMDEAG 445
M+E G
Sbjct: 707 ACMEENG 713
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/444 (20%), Positives = 166/444 (37%), Gaps = 82/444 (18%)
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR-DRVQDAMGIFRGMPDRGLTPDAVIC 270
+ DK +K+F EM EP ++TYN +I C R R + + + + D+G+
Sbjct: 251 DTDKYWKLFEEMSEWDCEPDVLTYNVMIK-LCARVGRKELIVFVLERIIDKGIKVCMTTM 309
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC------------------- 311
++L+ + +G+L A + M E+ D L +C
Sbjct: 310 HSLVAAYVGFGDLRTAERIVQAMREK----RRDLCKVLRECNAEDLKEKEEEEAEDDEDA 365
Query: 312 --------LCPQRRLSE--AFDLFREMLGGGL-------------SPREYAYFNLVGAYC 348
+ +SE D+F+++L + +P Y L+ Y
Sbjct: 366 FEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYM 425
Query: 349 LVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAE 408
G + + + M + P VTY ++ G ++ A +L MA
Sbjct: 426 KNGRVADTARMLEAMRRQD-----DRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMAR 480
Query: 409 MSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNY 468
M + + ++YN+++ G+CK ++ +A +L+ EM E GI D V+Y
Sbjct: 481 MGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIE--------------PDVVSY 526
Query: 469 NSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFY 528
N +I+ + + AL +EM G + Y L F + + A M
Sbjct: 527 NIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN 586
Query: 529 DLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAV 588
D + ++ L+E G+ GL +A V++ + + + P+ A
Sbjct: 587 DPRVKVDLIAWNMLVE---------------GYCRLGLIEDAQRVVSRMKENGFYPNVAT 631
Query: 589 YNFLIVEHCRRRNVDKAYNMYMEM 612
Y L + R A ++ E+
Sbjct: 632 YGSLANGVSQARKPGDALLLWKEI 655
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 136/308 (44%), Gaps = 9/308 (2%)
Query: 80 YKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL---RGMAVEPNVVSFNTVIDG 136
++++ EMV GF + T+N+L+ + +A+ + P S+N +++
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNS 228
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
L ++ K E + ++M G +PD +TYN L+ + + R L+D+M +
Sbjct: 229 LLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWT-NYRLGKMDRFDRLFDEMARDGFSP 287
Query: 197 PWTTYTSLIHLLCTYNVD-KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
TY L+H+L N A M G +PS++ Y LI ++
Sbjct: 288 DSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFL 347
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
M G PD V +IT + GEL+KA EM EM +G LPN TY+ +I LC
Sbjct: 348 DEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMA 407
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE 375
EA L +EM G +P Y LV G+ S+A + EM+ KG V
Sbjct: 408 GEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLV-- 465
Query: 376 FSPSLVTY 383
P ++ Y
Sbjct: 466 --PKMMKY 471
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 16/306 (5%)
Query: 144 KEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTS 203
K L+ EM G + T+N LI + + L +A+ + + K +Y +
Sbjct: 166 KAMWRLVDEMVQDGFPTTARTFNLLICSCGE-AGLAKQAVVQFMKSKTFNYRPFKHSYNA 224
Query: 204 LIHLLCTYNVDKAYK----VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
+++ L K YK V+ +M+ GF P ++TYN L+ ++ +F M
Sbjct: 225 ILNSLLGV---KQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMA 281
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
G +PD+ N L+ K + A M E GI P+ Y+ LID L L
Sbjct: 282 RDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
EM+ G P Y ++ Y + GE KA + EM KG LP+
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPN-------- 393
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
+ TYN++I G C+ G EA +L+ M +P+ V Y+ ++S K G+L +A +++
Sbjct: 394 VFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIR 453
Query: 440 EMDEAG 445
EM + G
Sbjct: 454 EMVKKG 459
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 38/224 (16%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D ++ EM GF P TYN+LLH + + A+ L M ++P+V+ + T+
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
IDGL ++ + L EM G PD V Y +IT
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITG---------------------- 368
Query: 194 IPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
+ + +DKA ++F EM G P++ TYN +I C ++A
Sbjct: 369 -------------YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACW 415
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG 297
+ + M RG P+ V+ +TL+++ K G+L +A ++ EMV++G
Sbjct: 416 LLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 147/354 (41%), Gaps = 49/354 (13%)
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS-EAFDLFREMLGG 331
L+ F + GE + + + EMV+ G A T++ LI C C + L+ +A F +
Sbjct: 155 LMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI-CSCGEAGLAKQAVVQFMKSKTF 213
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
P +++Y ++ + V ++ E ++K L D FSP ++TYN L++ N
Sbjct: 214 NYRPFKHSYNAILNSLLGVKQYKLI-----EWVYKQMLED---GFSPDVLTYNILLWTNY 265
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
LG+++ + MA SPD +YNI++ K + A + M E G +D
Sbjct: 266 RLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVG----ID 321
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
+V ++Y ++I+ G + DEM G V Y ++ G+
Sbjct: 322 PSV-----------LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYV 370
Query: 512 KKARTRGAKESLLRMFYDLCT--SLP-TFTYDTLIEN-CSNNEFKSVVELAKGFGMRGLK 567
AKE MF ++ LP FTY+++I C EF+ L K RG
Sbjct: 371 VSGELDKAKE----MFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCN 426
Query: 568 NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHM 621
P+ VY+ L+ + + +A + EMV G H+
Sbjct: 427 ----------------PNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHL 464
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 125/313 (39%), Gaps = 29/313 (9%)
Query: 217 YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
+++ EM+ GF + T+N LI + + A+ F P N ++
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNS 228
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS--EAFD-LFREMLGGGL 333
+ + + +M+E G P+ TY+ L L RL + FD LF EM G
Sbjct: 229 LLGVKQYKLIEWVYKQMLEDGFSPDVLTYNIL---LWTNYRLGKMDRFDRLFDEMARDGF 285
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
SP Y Y L+ ++G+ +K + H + PS++ Y LI G
Sbjct: 286 SPDSYTYNILLH---ILGKGNKPLAALTTLNHMKEVG-----IDPSVLHYTTLIDGLSRA 337
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLA 453
G +E L M + PD V Y ++I+G+ GEL KA E+ EM G + V
Sbjct: 338 GNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV--- 394
Query: 454 VFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
YNS+I C GE +A L EME G V+Y L K
Sbjct: 395 ------------FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKA 442
Query: 514 ARTRGAKESLLRM 526
+ A++ + M
Sbjct: 443 GKLSEARKVIREM 455
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 179/407 (43%), Gaps = 55/407 (13%)
Query: 51 SEMNRKGLDPARESLIHLL------------CCD-------QLQNDNAYKVLSEMVNSGF 91
S++ RK D SLI L CD +L +A L+ M N
Sbjct: 98 SQLRRKSYDSRYSSLIKLAESLDACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPET 157
Query: 92 LP--------------SVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
P V YNV + + + K ++++ + M ++P+ +F T+I
Sbjct: 158 APLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTII 217
Query: 135 DGLCAKRR--IKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
CA++ K A E ++M+S G PD+VT +I A + N V A++LYD+ + +
Sbjct: 218 S--CARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN-VDMALSLYDRARTE 274
Query: 193 RIPVPWTTYTSLIHLL-CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+ + T+++LI + + N D ++ EM A G +P+LV YN LI + R A
Sbjct: 275 KWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQA 334
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFF--CKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
I++ + G TP+ L+ + +YG + A + EM E+G+ Y+ L+
Sbjct: 335 KIIYKDLITNGFTPNWSTYAALVRAYGRARYG--DDALAIYREMKEKGLSLTVILYNTLL 392
Query: 310 DCLCPQRRLSEAFDLFREMLG-GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
R + EAF++F++M P + + +L+ Y G S+A +M G
Sbjct: 393 SMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAG- 451
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDD 415
F P+L ++I +V++ + + E+ ++PDD
Sbjct: 452 -------FEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 27/341 (7%)
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAP--------------DSVTYNT 167
A +PN VI G K ++A L M + AP + + YN
Sbjct: 121 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 180
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDK-AYKVFTEMIAS 226
+ K+ +L ++ L+D+M ++ I T+T++I V K A + F +M +
Sbjct: 181 TMKVFRKSKDLE-KSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSF 239
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G EP VT +I AY V A+ ++ DAV +TLI + G +
Sbjct: 240 GCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGC 299
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ EM G+ PN Y++LID + +R +A ++++++ G +P Y LV A
Sbjct: 300 LNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA 359
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGR-VEEALGILRG 405
Y A + EM KG S +++ YN L+ C R V+EA I +
Sbjct: 360 YGRARYGDDALAIYREMKEKGL--------SLTVILYNTLL-SMCADNRYVDEAFEIFQD 410
Query: 406 MAEM-SLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
M + PD +++ +I+ + G + +A +++M EAG
Sbjct: 411 MKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAG 451
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTV 133
D + EM G P++ YN L+ + R KR +A I + + PN ++ +
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ R +A + +EM KGL+ + YNTL++ M + V A ++ MK
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEIFQDMKNCE 415
Query: 194 I--PVPWTTYTSLIHLL-CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
P WT ++SLI + C+ V +A +M +GFEP+L +I Y +V D
Sbjct: 416 TCDPDSWT-FSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 251 AMGIFRGMPDRGLTPDAVICNTLI 274
+ F + + G+TPD C L+
Sbjct: 475 VVRTFDQVLELGITPDDRFCGCLL 498
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 33/346 (9%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR--AIALY 186
++N+++ L R+ + +L+EM +KGL +T T AM R A+ ++
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGL----LTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+ MK+ + + T L+ L + K +V + + F P+++TY L++ +C
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 312
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ +A I+ M D GL PD V N ++ + + A ++ M +G PN +Y+
Sbjct: 313 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
+I C Q + A + F +M+ GL P Y L+ + + + L EM K
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 367 GFLPDFVT---------------------------EFSPSLVTYNALIYGNCLLGRVEEA 399
G PD T E PS+ T+N ++ + E
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 492
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+ M + + PDD SY ++I G G+ +A + EM + G
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 538
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGL 137
+VL + + F P++ TY VLL+ +CR + + EA I M ++P++V+ N +++GL
Sbjct: 284 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 343
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
+ +A +L M SKG P+ +Y +I K +++ AI +D M +
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET-AIEYFDDMVDSGLQPD 402
Query: 198 WTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
YT LI T +D Y++ EM G P TYN LI + + I+
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 462
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
M + P N ++ + E + EM+++GI P+ ++Y+ LI L +
Sbjct: 463 KMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 522
Query: 317 RLSEAFDLFREMLGGGL 333
+ EA EML G+
Sbjct: 523 KSREACRYLEEMLDKGM 539
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 5/234 (2%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVID 135
A ++ ++M++ G P + +NV+L R + +A+ + M + PNV S+ +I
Sbjct: 317 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 376
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
C + ++ A E +M GL PD+ Y LIT L L +M+++ P
Sbjct: 377 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT-VYELLKEMQEKGHP 435
Query: 196 VPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
TY +LI L+ + + +++ +MI + EPS+ T+N ++ +Y + +
Sbjct: 436 PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 495
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
+ M +G+ PD LI G+ +A EM+++G+ Y+K
Sbjct: 496 WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 107/250 (42%), Gaps = 8/250 (3%)
Query: 74 LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSF 130
++ +A K+ M + G P+V +Y +++ +C+ ++ A+ M ++P+ +
Sbjct: 347 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
+I G ++++ ELL+EM KG PD TYN LI M+ N + +Y++M
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA-NQKMPEHGTRIYNKMI 465
Query: 191 QQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
Q I T+ ++ N + V+ EMI G P +Y LI + +
Sbjct: 466 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 525
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+A M D+G+ + N F + G+ E E+ G A+ +++
Sbjct: 526 EACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWA 585
Query: 310 DCL---CPQR 316
C QR
Sbjct: 586 QMTRRRCKQR 595
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/379 (19%), Positives = 148/379 (39%), Gaps = 43/379 (11%)
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
N++++ K + E + EM +G+L +T++ + + +A +F M
Sbjct: 199 NSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELM-- 255
Query: 331 GGLSPREYAY-FNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYG 389
++Y + + CL+ +A ++ + F+P+++TY L+ G
Sbjct: 256 -----KKYKFKIGVETINCLLDSLGRAKLGKEAQV---LFDKLKERFTPNMMTYTVLLNG 307
Query: 390 NCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
C + + EA I M + L PD V++N+++ G + + A +L M G
Sbjct: 308 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 367
Query: 450 VDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDG 509
V +Y +I +C + + A+ D+M G + +Y L G
Sbjct: 368 VR---------------SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 510 FDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNE 569
F + + E LL+ + TY+ LI+ +N + +
Sbjct: 413 FGTQKKLDTVYE-LLKEMQEKGHPPDGKTYNALIKLMANQK---------------MPEH 456
Query: 570 AASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIK 629
+ N ++Q +P +N ++ + RN + ++ EM+ G S LI+
Sbjct: 457 GTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIR 516
Query: 630 ALFHVGRHNEVRRVIQNVL 648
L G+ E R ++ +L
Sbjct: 517 GLISEGKSREACRYLEEML 535
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 33/346 (9%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR--AIALY 186
++N+++ L R+ + +L+EM +KGL +T T AM R A+ ++
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGL----LTMETFTIAMKAFAAAKERKKAVGIF 251
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+ MK+ + + T L+ L + K +V + + F P+++TY L++ +C
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 311
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ +A I+ M D GL PD V N ++ + + A ++ M +G PN +Y+
Sbjct: 312 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 371
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
+I C Q + A + F +M+ GL P Y L+ + + + L EM K
Sbjct: 372 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 431
Query: 367 GFLPDFVT---------------------------EFSPSLVTYNALIYGNCLLGRVEEA 399
G PD T E PS+ T+N ++ + E
Sbjct: 432 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 491
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+ M + + PDD SY ++I G G+ +A + EM + G
Sbjct: 492 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 537
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGL 137
+VL + + F P++ TY VLL+ +CR + + EA I M ++P++V+ N +++GL
Sbjct: 283 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 342
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
+ +A +L M SKG P+ +Y +I K +++ AI +D M +
Sbjct: 343 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET-AIEYFDDMVDSGLQPD 401
Query: 198 WTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
YT LI T +D Y++ EM G P TYN LI + + I+
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 461
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
M + P N ++ + E + EM+++GI P+ ++Y+ LI L +
Sbjct: 462 KMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 521
Query: 317 RLSEAFDLFREMLGGGL 333
+ EA EML G+
Sbjct: 522 KSREACRYLEEMLDKGM 538
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 5/234 (2%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVID 135
A ++ ++M++ G P + +NV+L R + +A+ + M + PNV S+ +I
Sbjct: 316 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 375
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
C + ++ A E +M GL PD+ Y LIT L L +M+++ P
Sbjct: 376 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT-VYELLKEMQEKGHP 434
Query: 196 VPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
TY +LI L+ + + +++ +MI + EPS+ T+N ++ +Y + +
Sbjct: 435 PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 494
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
+ M +G+ PD LI G+ +A EM+++G+ Y+K
Sbjct: 495 WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 548
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 107/250 (42%), Gaps = 8/250 (3%)
Query: 74 LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSF 130
++ +A K+ M + G P+V +Y +++ +C+ ++ A+ M ++P+ +
Sbjct: 346 MKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 405
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
+I G ++++ ELL+EM KG PD TYN LI M+ N + +Y++M
Sbjct: 406 TCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA-NQKMPEHGTRIYNKMI 464
Query: 191 QQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
Q I T+ ++ N + V+ EMI G P +Y LI + +
Sbjct: 465 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 524
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+A M D+G+ + N F + G+ E E+ G A+ +++
Sbjct: 525 EACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWA 584
Query: 310 DCL---CPQR 316
C QR
Sbjct: 585 QMTRRRCKQR 594
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 152/389 (39%), Gaps = 43/389 (11%)
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
+G D+ N++++ K + E + EM +G+L +T++ + + +
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKK 246
Query: 321 AFDLFREMLGGGLSPREYAY-FNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
A +F M ++Y + + CL+ +A ++ + F+P+
Sbjct: 247 AVGIFELM-------KKYKFKIGVETINCLLDSLGRAKLGKEAQV---LFDKLKERFTPN 296
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
++TY L+ G C + + EA I M + L PD V++N+++ G + + A +L
Sbjct: 297 MMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH 356
Query: 440 EMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRA 499
M G V +Y +I +C + + A+ D+M G
Sbjct: 357 VMKSKGPCPNVR---------------SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401
Query: 500 SVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAK 559
+ +Y L GF + + E LL+ + TY+ LI+ +N +
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYE-LLKEMQEKGHPPDGKTYNALIKLMANQK--------- 451
Query: 560 GFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFAS 619
+ + N ++Q +P +N ++ + RN + ++ EM+ G
Sbjct: 452 ------MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 620 HMFSVLALIKALFHVGRHNEVRRVIQNVL 648
S LI+ L G+ E R ++ +L
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEML 534
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 121/230 (52%), Gaps = 8/230 (3%)
Query: 91 FLPSVATYNVLLHAYCR--DKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKE 145
F P +T+ +LL CR D + +L M +EP+ V+ + + LC R+ E
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP-WTTYTSL 204
A++L++E+ K PD+ TYN L+ + K +L + D+M+ P ++T L
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV-VYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 205 IHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL 263
I +C + N+ +A + +++ +GF+P YN ++ +C + +A+G+++ M + G+
Sbjct: 237 IDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
PD + NTLI K G +E+A MV+ G P+ TY+ L++ +C
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 9/219 (4%)
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++ ++V M+ +G EP VT + + + C RV +A + + + ++ PD N
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 272 TLITFFCKYGELEKAFEMRAEMVER-GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
L+ CK +L +E EM + + P+ +++ LID +C + L EA L ++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
G P + Y ++ +C + + S+A + +M +G PD +TYN LI+G
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD--------QITYNTLIFGL 310
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
GRVEEA L+ M + PD +Y +++G C+ G
Sbjct: 311 SKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 130/277 (46%), Gaps = 18/277 (6%)
Query: 193 RIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIAS--GFEPSLVTYNELIHAYCCR---D 246
RIP+ + S++ + V + K+F ++ S F P T+ L+ ++ CR
Sbjct: 80 RIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILL-SHACRAPDS 138
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ + + M + GL PD V + + C+ G +++A ++ E+ E+ P+ TY+
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGG-GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
L+ LC + L ++ EM + P ++ L+ C +A +L ++ +
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
GF PD YN ++ G C L + EA+G+ + M E + PD ++YN +I G
Sbjct: 259 AGFKPD--------CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 426 CKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL 462
K G + +A + M +AG D A ++SLM G+
Sbjct: 311 SKAGRVEEARMYLKTMVDAG--YEPDTATYTSLMNGM 345
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 6/209 (2%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVI 134
N ++VL+ MVN+G P T ++ + + C RVDEA +++ + + P+ ++N ++
Sbjct: 142 NVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 135 DGLCAKRRIKEAEELLQEMNSK-GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
LC + + E + EM + PD V++ LI + + NL A+ L ++
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR-EAMYLVSKLGNAG 260
Query: 194 IPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
Y +++ CT + +A V+ +M G EP +TYN LI RV++A
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYG 281
+ M D G PD +L+ C+ G
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C+ A ++S++ N+GF P YN ++ +C + EA+G+ + M VEP+
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK 174
+++NT+I GL R++EA L+ M G PD+ TY +L+ M +
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 318 LSEAFDLFREMLGG--GLSPREYAYFNLVGAYCLVGE--FSKAFHLRDEMIHKGFLPDFV 373
+++ LF+ +L P + L+ C + S + + M++ G PD
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPD-- 158
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
VT + + C GRV+EA +++ + E PD +YN ++ CK +L
Sbjct: 159 ------QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
+E + EM + ++ D V++ +I+ C + +A+ L ++ +
Sbjct: 213 VYEFVDEMRDDFDVK--------------PDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKS 553
G LY + GF ++ A + + + TY+TLI
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEA-VGVYKKMKEEGVEPDQITYNTLIF--------- 308
Query: 554 VVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRR 599
G G EA L T++ Y+PD A Y L+ CR+
Sbjct: 309 ------GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 131/653 (20%), Positives = 265/653 (40%), Gaps = 76/653 (11%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLL-CCDQLQNDNAYKVLSEMVNSGFLPSVATY 98
+G LL+ + + ++G R + + LL C + + ++L P V
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVE 118
Query: 99 NVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL 158
LL Y + + +A + M E N+ +++ +I + R +E +L + M G+
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMR-ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV 177
Query: 159 APDSVTYNTLITAMSKNTNL----VIRAIALYDQMKQ-QRIPVPWTTYTSLIHLLCTYNV 213
PD + ++ + ++ VI ++ + M R+ + ++ C +
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRV----SNSILAVYAKCG-EL 232
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
D A K F M E ++ +N ++ AYC + ++A+ + + M G++P V N L
Sbjct: 233 DFATKFFRRM----RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 288
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
I + + G+ + A ++ +M GI + T++ +I L +A D+FR+M G+
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD---------------------- 371
P + V A + ++ + + GF+ D
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARK 408
Query: 372 -FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGE 430
F + + + T+N++I G C G +A + M + +L P+ +++N +ISG+ K G+
Sbjct: 409 VFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGD 468
Query: 431 LGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDE 490
G+A +L M++ G ++ + +N +I Y G+ +AL L +
Sbjct: 469 EGEAMDLFQRMEKDGKVQ--------------RNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 491 MEHHGSLRASVLYIMLFDGFDKKARTRGAKE---SLLRMFYDLCTSLPTFTYDTLIENCS 547
M+ + SV + L + +E +LR D ++ DT ++
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 548 ---------NNEFKSVV---ELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVE 595
E K ++ L G+ + G A ++ N + P+ + +I+
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Query: 596 HCRRRNVDKAYNMYMEMVHYGFAS--HMFSVLALIKALFHV-GRHNEVRRVIQ 645
H NVD+ + V Y A+ H+ L A+ ++ GR N + +Q
Sbjct: 635 HGLMGNVDEG-----KKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQ 682
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 176/441 (39%), Gaps = 102/441 (23%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C +++ A +++ EM G P + T+N+L+ Y + + D AM +++ M + +V
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV 317
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMS----KNTNLVIRAI 183
++ +I GL +A ++ ++M G+ P++VT + ++A S N + +I
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 184 AL------------------------------YDQMKQQRIPVPWTTYTSLIHLLCTYN- 212
A+ +D +K + + T+ S+I C
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQAGY 433
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG-LTPDAVICN 271
KAY++FT M + P+++T+N +I Y +AM +F+ M G + + N
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL--------------CPQRR 317
+I + + G+ ++A E+ +M +PN+ T L+ C RR
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR 553
Query: 318 LSEAFDLFREMLGG----------------GLSPREYAYFN-LVGAYCLVGEFSKAFHLR 360
+A + L G+ ++ +N L+G Y L G + A L
Sbjct: 554 NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALF 613
Query: 361 DEMIHKGFLPDFVTEFS----------------------------PSLVTYNALIYGNCL 392
++M +G P+ T S P+L +A++Y
Sbjct: 614 NQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGR 673
Query: 393 LGRVEEALGILRGMAEMSLSP 413
R+EEAL ++ M S +P
Sbjct: 674 ANRLEEALQFIQEMNIQSETP 694
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 115/552 (20%), Positives = 226/552 (40%), Gaps = 69/552 (12%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
EPN++ + D LC + EAE+ L + +G TY L+ + + ++ + I
Sbjct: 44 EPNIIP-DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRI 102
Query: 184 --ALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHA 241
A + + + V + C + A KVF M E +L T++ +I A
Sbjct: 103 LHARFGLFTEPDVFVETKLLSMYAKCGC---IADARKVFDSM----RERNLFTWSAMIGA 155
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
Y +R ++ +FR M G+ PD + ++ G++E + + +++ G+
Sbjct: 156 YSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC 215
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE---YAYFNLVGAYCLVGEFSKAFH 358
+ ++ L A FR M RE A+ +++ AYC G+ +A
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRM-------RERDVIAWNSVLLAYCQNGKHEEAVE 268
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
L EM +G SP LVT+N LI G LG+ + A+ +++ M ++ D ++
Sbjct: 269 LVKEMEKEG--------ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAGGI--------------------RGVDLAVFSSL 458
+ISG G +A ++ +M AG + +G ++ +
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 459 MKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRG 518
M + D + NS+++ Y G++ A + D +++ + + + G+ +
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGK 436
Query: 519 AKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVL 578
A E RM D T++T+I G+ G + EA + +
Sbjct: 437 AYELFTRM-QDANLRPNIITWNTMIS---------------GYIKNGDEGEAMDLFQRME 480
Query: 579 Q-WNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRH 637
+ + + A +N +I + + D+A ++ +M F + ++L+L+ A ++
Sbjct: 481 KDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGA 540
Query: 638 NEVRRVIQNVLR 649
VR + VLR
Sbjct: 541 KMVREIHGCVLR 552
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 124/250 (49%), Gaps = 6/250 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR----GMAVEPNVVSFNT 132
+NA KV EM + ++N LL+A K+ D GI + +++EP+V S+NT
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+I GLC K EA L+ E+ +KGL PD +T+N L+ S ++ +M ++
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHE-SYTKGKFEEGEQIWARMVEK 241
Query: 193 RIPVPWTTYTS-LIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+ +Y + L+ L ++ +F ++ + +P + T+ +I + ++ +A
Sbjct: 242 NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEA 301
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ ++ + G P + N+L+ CK G+LE A+E+ E+ + +L + +++D
Sbjct: 302 ITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDA 361
Query: 312 LCPQRRLSEA 321
L + EA
Sbjct: 362 LVKGSKQDEA 371
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 135/316 (42%), Gaps = 13/316 (4%)
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
N+ + + L A ++ + EE+L+E N K + I + + A +
Sbjct: 70 NIAVYERTVRRLAAAKKFEWVEEILEEQN-KYPNMSKEGFVARIINLYGRVGMFENAQKV 128
Query: 186 YDQMKQQRIPVPWTTYTSLIHL-LCTYNVDKAYKVFTEMIAS-GFEPSLVTYNELIHAYC 243
+D+M ++ ++ +L++ + + D +F E+ EP + +YN LI C
Sbjct: 129 FDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLC 188
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
+ +A+ + + ++GL PD + N L+ G+ E+ ++ A MVE+ + +
Sbjct: 189 GKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIR 248
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
+Y+ + L + + E LF ++ G L P + + ++ + G+ +A E+
Sbjct: 249 SYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEI 308
Query: 364 IHKGFLP-DFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
G P FV +N+L+ C G +E A + + + L D+ V+
Sbjct: 309 EKNGCRPLKFV---------FNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
Query: 423 SGFCKLGELGKAFELM 438
K + +A E++
Sbjct: 360 DALVKGSKQDEAEEIV 375
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P + +YN LI G C G EA+ ++ + L PD +++NI++ G+ + ++
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 438 ---MVEMDEAGGIRGVDLAVFSSLMKGLSDEV-----------------NYNSVINAYCA 477
MVE + IR + + M+ S+E+ + ++I + +
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 478 EGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYD---LCTSL 534
EG++ +A+ + E+E +G ++ L K A E +F + ++
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Query: 535 PTFTYDTLIENCSNNEFKSVVELAK 559
D L++ +E + +VELAK
Sbjct: 355 LQEVVDALVKGSKQDEAEEIVELAK 379
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 129/292 (44%), Gaps = 7/292 (2%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRD----KRVDEAMGILRGMAVEPNVVSFNTVIDG 136
+++ EM+ G+ + T+N+L+ C + + V E + P S+N ++
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLI-CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHS 231
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
L ++ K + + ++M G PD +TYN ++ A + R L D+M +
Sbjct: 232 LLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFR-LGKTDRLYRLLDEMVKDGFSP 290
Query: 197 PWTTYTSLIHLLCTYNVD-KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
TY L+H L T N A + M G EP ++ + LI +++
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
G TPD V +IT + GELEKA EM EM E+G LPN TY+ +I C
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 316 RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
+ EA L +EM G +P Y LV G+ +A + +M+ KG
Sbjct: 411 GKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 44/246 (17%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL---RGMAVEPNVVSFN 131
+ D Y++L EMV GF P + TYN+LLH + A+ +L R + VEP V+ F
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
T+IDGL +++ + + E G PD V Y +IT L
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGEL------------- 378
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+KA ++F EM G P++ TYN +I +C + ++A
Sbjct: 379 ----------------------EKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ + M RG P+ V+ +TL+ G++ +A E+ +MVE+G Y LI
Sbjct: 417 CALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG------HYVHLISK 470
Query: 312 LCPQRR 317
L RR
Sbjct: 471 LKKYRR 476
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 130/301 (43%), Gaps = 16/301 (5%)
Query: 149 LLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL 208
L+ EM G + T+N LI + L + + + K +Y +++H L
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTCGE-AGLARDVVEQFIKSKTFNYRPYKHSYNAILHSL 232
Query: 209 CTYNVDKAYK----VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLT 264
K YK V+ +M+ GF P ++TYN ++ A + + M G +
Sbjct: 233 LGV---KQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFS 289
Query: 265 PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
PD N L+ + A + M E G+ P ++ LID L +L
Sbjct: 290 PDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYF 349
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
E + G +P Y ++ Y GE KA + EM KG LP+ + TYN
Sbjct: 350 MDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN--------VFTYN 401
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEA 444
++I G C+ G+ +EA +L+ M +P+ V Y+ +++ G++ +A E++ +M E
Sbjct: 402 SMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Query: 445 G 445
G
Sbjct: 462 G 462
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 150/357 (42%), Gaps = 47/357 (13%)
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS-EAFDLFREMLGG 331
L+ F + GE + + EM++ G A T++ LI C C + L+ + + F +
Sbjct: 158 LMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI-CTCGEAGLARDVVEQFIKSKTF 216
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
P +++Y ++ + V ++ + ++M+ GF PD ++TYN +++ N
Sbjct: 217 NYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPD--------VLTYNIVMFANF 268
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
LG+ + +L M + SPD +YNI++ + A L+ M E G GV
Sbjct: 269 RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV- 327
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
F++L+ GLS G++ DE G V Y ++ G+
Sbjct: 328 -IHFTTLIDGLS-------------RAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYI 373
Query: 512 KKARTRGAKESLLRMFYDLCT--SLP-TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKN 568
A+E MF ++ LP FTY+++I +GF M G
Sbjct: 374 SGGELEKAEE----MFKEMTEKGQLPNVFTYNSMI---------------RGFCMAGKFK 414
Query: 569 EAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVL 625
EA ++L + P+ VY+ L+ V +A+ + +MV G H+ S L
Sbjct: 415 EACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKL 471
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 120/310 (38%), Gaps = 54/310 (17%)
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL---PNAD 303
R+ D M I G P T + +IC GE A ++ + ++ P
Sbjct: 173 RLIDEM-IKDGYPTTACTFNLLICTC--------GEAGLARDVVEQFIKSKTFNYRPYKH 223
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
+Y+ ++ L ++ ++ +ML G +P Y ++ A +G+ + + L DEM
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM 283
Query: 364 IHKGFLPDFVTE---------------------------FSPSLVTYNALIYGNCLLGRV 396
+ GF PD T P ++ + LI G G++
Sbjct: 284 VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFS 456
E + ++ +PD V Y ++I+G+ GEL KA E+ EM E G + V
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV------ 397
Query: 457 SLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKART 516
YNS+I +C G+ +A L EME G V+Y L + +
Sbjct: 398 ---------FTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKV 448
Query: 517 RGAKESLLRM 526
A E + M
Sbjct: 449 LEAHEVVKDM 458
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 11/298 (3%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVS----FNTVI 134
A+ V S+ GF P+ TY + L A C+ +D A + M ++ V+S +I
Sbjct: 250 AFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM-LKSGVLSEGEQMGNII 308
Query: 135 DGLCAKRRIKEAEEL--LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
C + + +EA + L + K L P V TLITA+ KN + A + + +
Sbjct: 309 TWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGE 366
Query: 193 RIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
++ +IH LC NV A + +MI+ G P +N ++HA + +A
Sbjct: 367 ARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEA 426
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ + M RGL PD +I+ + K G +++A E+ AE ++ + TY LI
Sbjct: 427 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRG 486
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVG-EFSKAFHLRDEMIHKGF 368
C EA L EM G+ P Y L+ ++CL ++ KA L +EM KG
Sbjct: 487 YCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 116/303 (38%), Gaps = 75/303 (24%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA---------------- 114
C + D A V +M+ SG L ++ +C++ + +EA
Sbjct: 277 CKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPP 336
Query: 115 -----------------------MGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQ 151
+G L G A + F+ VI LC R +K+A+ LL
Sbjct: 337 RFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLL 396
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY 211
+M SKG AP + +N ++ A SK T
Sbjct: 397 DMISKGPAPGNAVFNLVVHACSK-----------------------------------TG 421
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++D+A +V M + G +P + TY +I Y + +A I + V +
Sbjct: 422 DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYH 481
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR-RLSEAFDLFREMLG 330
LI +CK E ++A ++ EM G+ PNAD Y+KLI C + +A LF EM
Sbjct: 482 ALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQ 541
Query: 331 GGL 333
GL
Sbjct: 542 KGL 544
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 6/210 (2%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV 123
+LI LC + A ++L ++ + ++ ++H+ CR + V +A +L M
Sbjct: 341 TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMIS 400
Query: 124 E---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
+ P FN V+ + EA+E+L+ M S+GL PD TY +I+ +K ++
Sbjct: 401 KGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKG-GMMD 459
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELI 239
A + + K++ + TY +LI C D+A K+ EM G +P+ YN+LI
Sbjct: 460 EAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Query: 240 HAYCCRD-RVQDAMGIFRGMPDRGLTPDAV 268
++C + + A +F M +GL +A+
Sbjct: 520 QSFCLKALDWEKAEVLFEEMKQKGLHLNAI 549
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 129/309 (41%), Gaps = 47/309 (15%)
Query: 236 NELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE 295
NELI + + + A +F + G TP+A + CK ++ A + +M++
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 296 RGILPNADTYSKLIDCLCPQRRLSEAFDLFR--EMLGGGLSPREYAYFNLVGAYC----- 348
G+L + +I C + + EA+ ++ + L PR A L+ A C
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGT 352
Query: 349 ----------LVGE--------FSKAFH----LRDEMIHKGFLPDFVTEF-SPSLVTYNA 385
L GE FS H +R+ K L D +++ +P +N
Sbjct: 353 ITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 386 LIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+++ G ++EA +L+ M L PD +Y ++ISG+ K G + +A E++ E +
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKK- 471
Query: 446 GIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIM 505
K LS V Y+++I YC E +AL L +EM+ G + Y
Sbjct: 472 -------------HKKLSP-VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNK 517
Query: 506 LFDGFDKKA 514
L F KA
Sbjct: 518 LIQSFCLKA 526
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 152/387 (39%), Gaps = 84/387 (21%)
Query: 238 LIHAYCCRDRVQDAMGIFRGMPDRGLTP-----DAVICNTLITFFCKYGELEKAFEMRAE 292
L+ A R DA G++ + + G + I N LI F K G+ + AF++ ++
Sbjct: 197 LLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSK 256
Query: 293 MVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE 352
E G PNA TY ++ LC + + A + +ML G+ N++ +C G+
Sbjct: 257 TEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGK 316
Query: 353 FSKAFHLRD--EMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEM- 409
+A+ + + + K P FV +L+T AL + + +E LG L G A
Sbjct: 317 AEEAYSVYELAKTKEKSLPPRFVA----TLIT--ALCKNDGTITFAQEMLGDLSGEARRR 370
Query: 410 SLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYN 469
+ P ++ VI C++ + A L+++M G G AVF N
Sbjct: 371 GIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGN--AVF-------------N 411
Query: 470 SVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYD 529
V++A G++ +A VL +M +RG K +
Sbjct: 412 LVVHACSKTGDLDEA--------------KEVLKLM---------ESRGLKPDV------ 442
Query: 530 LCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVY 589
+TY +I G+ G+ +EA +L + + K Y
Sbjct: 443 -------YTYTVII---------------SGYAKGGMMDEAQEILAEAKKKHKKLSPVTY 480
Query: 590 NFLIVEHCRRRNVDKAYNMYMEMVHYG 616
+ LI +C+ D+A + EM +G
Sbjct: 481 HALIRGYCKIEEYDEALKLLNEMDRFG 507
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 52 EMNRKGLDPARE--SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
+M KG P +L+ C D A +VL M + G P V TY V++ Y +
Sbjct: 397 DMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGG 456
Query: 110 RVDEAMGIL-----RGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
+DEA IL + + P V+++ +I G C EA +LL EM+ G+ P++
Sbjct: 457 MMDEAQEILAEAKKKHKKLSP--VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADE 514
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQ 192
YN LI + +A L+++MKQ+
Sbjct: 515 YNKLIQSFCLKALDWEKAEVLFEEMKQK 542
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 218/477 (45%), Gaps = 66/477 (13%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
+V T+ ++ Y R K++ A + + M E NVVS+NT+IDG RI +A EL EM
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMP-ERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV 213
+ + V++N+++ A+ + + A+ L+++M ++ + V WT L V
Sbjct: 167 PERNI----VSWNSMVKALVQRGR-IDEAMNLFERMPRRDV-VSWTAMVD--GLAKNGKV 218
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
D+A ++F M E +++++N +I Y +R+ +A +F+ MP+R D NT+
Sbjct: 219 DEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTM 270
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML-GGG 332
IT F + E+ KA + M E+ ++ +++ +I + EA ++F +ML G
Sbjct: 271 ITGFIRNREMNKACGLFDRMPEKNVI----SWTTMITGYVENKENEEALNVFSKMLRDGS 326
Query: 333 LSPREYAYFNLVGAYC-----LVGE-----FSKAFHLRDEMIHKGFLPDFVTE------- 375
+ P Y +++ A + G+ SK+ H ++E++ L +
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 376 --FSPSLVTYNALIYGNCLL------GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
F LV LI N ++ G +EA+ + M + P V+Y ++
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSH 446
Query: 428 LGELGKAFELMVEM--DEAGGIRG------VDLAVFSSLMKGLSDEVN----------YN 469
G + K E ++ DE+ +R VDL + +K +++ +N Y
Sbjct: 447 AGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYG 506
Query: 470 SVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
++++A EVS A + ++ GS A Y+++ + + + A E ++M
Sbjct: 507 AILSACNVHNEVSIAKEVVKKVLETGSDDAGT-YVLMSNIYAANGKREEAAEMRMKM 562
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 108/265 (40%), Gaps = 45/265 (16%)
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P + LI C +G++ EA + G+ E D V++ VI+G+ KLG++ +A EL
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREAREL 99
Query: 438 MVEMDE-----------AGGIRGVDLAVFSSLMKGLSDE--VNYNSVINAYCAEGEVSKA 484
+D +G +R L++ L + + + V++N++I+ Y G + KA
Sbjct: 100 FDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKA 159
Query: 485 LILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE 544
L L DEM I+ ++ K RG + + +F E
Sbjct: 160 LELFDEMPERN--------IVSWNSMVKALVQRGRIDEAMNLF----------------E 195
Query: 545 NCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDK 604
+ S + G G +EA + + + + N +N +I + + +D+
Sbjct: 196 RMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDE 251
Query: 605 AYNMYMEMVHYGFASHMFSVLALIK 629
A ++ M FAS + I+
Sbjct: 252 ADQLFQVMPERDFASWNTMITGFIR 276
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 72 DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----PNV 127
D + D A K++ ++ P+ T+N ++ ++ R+ + I R M E PNV
Sbjct: 227 DDVSVDEAKKMIGKIK-----PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNV 281
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
S+N +++ CA+ + EAE++ +EM +G+ D V YNT+I + N V++A L+
Sbjct: 282 YSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFE-VVKAKELFR 340
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYC-CR 245
M + I TY L++ C +VD V+ EM GFE +T L+ C R
Sbjct: 341 DMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDR 400
Query: 246 D--RVQDAMGIFR-GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNA 302
D RV +A I + + + P L+ C+ G++++A ++AEMV +G P+
Sbjct: 401 DGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQ 460
Query: 303 DTYSKLID 310
+TY ID
Sbjct: 461 ETYRAFID 468
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 144/338 (42%), Gaps = 26/338 (7%)
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK-----NTNLVIRAI- 183
F+ +I + I A +++++ S+G+ T N LIT +S+ N + R +
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 184 ----ALYDQMKQQ--RIPVPWTTYTSLIHLLC----TYNVDKAYKVFTEMIASGFEPSLV 233
D+ K+ +I TT+ S++ T V++ ++ E + G P++
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEV--GCSPNVY 282
Query: 234 TYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM 293
+YN L+ AYC R + +A ++ M RG+ D V NT+I C E+ KA E+ +M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 294 VERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEF 353
+GI TY L++ C + ++REM G LV C +
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 354 SKAFHLRDEMIHKGFLPDFVTE--FSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSL 411
+ D + D V E F PS Y L+ C G+++ AL I M
Sbjct: 403 QRVVEAAD------IVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGF 456
Query: 412 SPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
P +Y I G+ +G+ + L +EM E+ +R
Sbjct: 457 KPSQETYRAFIDGYGIVGDEETSALLAIEMAESLKLRA 494
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 10/286 (3%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGMA--VEPNVVSFNTVIDGLCAKRRIKEAEELL 150
P + +N+LL A C+ V E +LR M V+P+ +FN + G C R K+A +LL
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLL 291
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM--KQQRIPVPWTTYTSLIHLL 208
+EM G P++ TY I + +V A L+D M K + P T T + ++
Sbjct: 292 EEMIEAGHKPENFTYCAAIDTFCQ-AGMVDEAADLFDFMITKGSAVSAP-TAKTFALMIV 349
Query: 209 CTYNVDKAYKVFT---EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
DKA + F MI++G P + TY ++I C ++V +A M ++G P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
D V N + C+ + ++A ++ MVE P+ TY+ LI AF+ +
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 326 REMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF-LP 370
EM Y ++ +A L +E+++KG LP
Sbjct: 470 TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLP 515
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 129/294 (43%), Gaps = 9/294 (3%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
P T+NVL +CR + +AM +L M +P ++ ID C + EA +L
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 325
Query: 150 LQEMNSKGLA---PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
M +KG A P + T+ +I A++KN + L +M +TY +I
Sbjct: 326 FDFMITKGSAVSAPTAKTFALMIVALAKN-DKAEECFELIGRMISTGCLPDVSTYKDVIE 384
Query: 207 LLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
+C VD+AYK EM G+ P +VTYN + C + +A+ ++ M + P
Sbjct: 385 GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAP 444
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
N LI+ F + + + AF EM +R + + +TY +I+ L R EA L
Sbjct: 445 SVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLL 504
Query: 326 REMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
E++ GL + + + VG KA H E + K + F+ S
Sbjct: 505 EEVVNKGLKLPYRVFDSFLMRLSEVGNL-KAIHKVSEHMKKFYNHSMARRFALS 557
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 23/285 (8%)
Query: 190 KQQRIPVPW----TTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
K++RI V + L+ LC + K + + +P T+N L +C
Sbjct: 222 KRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWC-- 279
Query: 246 DRVQD---AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL--- 299
RV+D AM + M + G P+ I FC+ G +++A ++ M+ +G
Sbjct: 280 -RVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSA 338
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P A T++ +I L + E F+L M+ G P Y +++ C+ + +A+
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
DEM +KG+ PD +VTYN + C + +EAL + M E +P +YN
Sbjct: 399 LDEMSNKGYPPD--------IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYN 450
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSD 464
++IS F ++ + AF EMD+ ++ D+ + +++ GL D
Sbjct: 451 MLISMFFEMDDPDGAFNTWTEMDKRDCVQ--DVETYCAMINGLFD 493
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 119/299 (39%), Gaps = 46/299 (15%)
Query: 377 SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
P + +N L+ C G V+E +LR M + PD ++N++ G+C++ + KA +
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGS 496
L+ EM EAG + Y + I+ +C G V +A L D M GS
Sbjct: 290 LLEEMIEAGH---------------KPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGS 334
Query: 497 LRASVL---YIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKS 553
++ + ++ K + E + RM C LP + +K
Sbjct: 335 AVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC--LPDVS-----------TYKD 381
Query: 554 VVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMV 613
V+E G M +EA L+ + Y PD YN + C R D+A +Y MV
Sbjct: 382 VIE---GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMV 438
Query: 614 H---------YGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCN-ING-FELHKA 661
Y MF + F+ + R +Q+V C ING F+ H+A
Sbjct: 439 ESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA 497
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Query: 75 QNDNA---YKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVV 128
+ND A ++++ M+++G LP V+TY ++ C ++VDEA L M+ + P++V
Sbjct: 353 KNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIV 412
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLIT 170
++N + LC R+ EA +L M AP TYN LI+
Sbjct: 413 TYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----PNVVSFNT 132
D AYK L EM N G+ P + TYN L C +++ DEA+ L G VE P+V ++N
Sbjct: 393 DEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALK-LYGRMVESRCAPSVQTYNM 451
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
+I A EM+ + D TY +I + + + A L +++ +
Sbjct: 452 LISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLF-DCHRAKEACFLLEEVVNK 510
Query: 193 RIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSL 232
+ +P+ + S + L KA +E + + S+
Sbjct: 511 GLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSM 550
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 142/614 (23%), Positives = 257/614 (41%), Gaps = 101/614 (16%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGL 137
+A +L ++ G + V + LL Y + +DEA + M E N+V+ N ++ G
Sbjct: 60 HARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP-ERNIVTCNAMLTGY 118
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
RR+ EA L +EM + V++ ++TA+ + A+ L+D+M ++ + V
Sbjct: 119 VKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGR-SEDAVELFDEMPERNV-VS 171
Query: 198 WTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPS--LVTYNELIHAYCCRDRVQDAMGIF 255
W T + L+ +++KA +VF M PS +V++N +I Y D +++A +F
Sbjct: 172 WNTLVT--GLIRNGDMEKAKQVFDAM------PSRDVVSWNAMIKGYIENDGMEEAKLLF 223
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQ 315
M ++ + V +++ +C+YG++ +A+ + EM ER I+ +++ +I
Sbjct: 224 GDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV----SWTAMISGFAWN 275
Query: 316 RRLSEAFDLFREMLGG--GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
EA LF EM +SP +L A G F E +H + +
Sbjct: 276 ELYREALMLFLEMKKDVDAVSPNGETLISLAYA---CGGLGVEFRRLGEQLHAQVISNGW 332
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
+L++ G + A +L + S D S NI+I+ + K G+L +
Sbjct: 333 ETVDHDGRLAKSLVHMYASSGLIASAQSLL------NESFDLQSCNIIINRYLKNGDLER 386
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
A E + E +K L D+V++ S+I+ Y G+VS+A L ++
Sbjct: 387 A-ETLFER-----------------VKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD 428
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP-TFTYDTLIENCSNNEFK 552
+ V + ++ G + A L M C P TY L+ +
Sbjct: 429 ----KDGVTWTVMISGLVQNELFAEAASLLSDMVR--CGLKPLNSTYSVLLSSAG----- 477
Query: 553 SVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
+ L +G + + + + Y PD + N L+ + + ++ AY ++ +M
Sbjct: 478 ATSNLDQGKHIHCVIAKTTAC--------YDPDLILQNSLVSMYAKCGAIEDAYEIFAKM 529
Query: 613 V---------------HYGFASHMFSVLALIKALFHVGRH-NEVRRVIQNVLRSCN---- 652
V H+G A L L K + G+ N V VL +C+
Sbjct: 530 VQKDTVSWNSMIMGLSHHGLAD---KALNLFKEMLDSGKKPNSV--TFLGVLSACSHSGL 584
Query: 653 -INGFELHKALSET 665
G EL KA+ ET
Sbjct: 585 ITRGLELFKAMKET 598
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 147/356 (41%), Gaps = 56/356 (15%)
Query: 86 MVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKE 145
++N F + + N++++ Y ++ ++ A + + + VS+ ++IDG +
Sbjct: 361 LLNESF--DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSR 418
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI 205
A L Q+++ K D VT+ +I+ + +N A L D ++ P+ +TY+ L+
Sbjct: 419 AFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLN-STYSVLL 473
Query: 206 HLL-CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLT 264
T N+D+ + + + C D
Sbjct: 474 SSAGATSNLDQGKHI---------------HCVIAKTTACYD------------------ 500
Query: 265 PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
PD ++ N+L++ + K G +E A+E+ A+MV++ + +++ +I L +A +L
Sbjct: 501 PDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV----SWNSMIMGLSHHGLADKALNL 556
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
F+EML G P + ++ A G ++ L M P + Y
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE-------TYSIQPGIDHYI 609
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
++I LLGR + ++ + +PD Y ++ G C L K E + E
Sbjct: 610 SMID---LLGRAGKLKEAEEFISALPFTPDHTVYGALL-GLCGLNWRDKDAEGIAE 661
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 143/321 (44%), Gaps = 21/321 (6%)
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
FN V+ L K+ + LL ++ + A D T++ + + K AI ++ +
Sbjct: 106 FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVK-VGKEEDAIGIFKIL 164
Query: 190 KQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEM--IASGFEPSLVTYNELIHAYCCRD 246
+ P T T++I LC+ +V +A V + SG E L Y L+ + +
Sbjct: 165 DKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNE--LSVYRSLLFGWSVQR 222
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKY-------GELEKAFEMRAEMVERGIL 299
V++A + + M G+TPD N+L+T C+ G + +A + EM I
Sbjct: 223 NVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQ 282
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P + +Y+ L+ CL RR+ E+ + +M G P +Y+ +V L G F K +
Sbjct: 283 PTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQI 342
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
DEMI +GF P+ +F Y LI C + RV AL + M S+ Y+
Sbjct: 343 VDEMIERGFRPE--RKF------YYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYD 394
Query: 420 IVISGFCKLGELGKAFELMVE 440
++I CK G K EL E
Sbjct: 395 LLIPKLCKGGNFEKGRELWEE 415
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 39/275 (14%)
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVS------FNTVIDGLCAKRRIKEAEELL 150
T ++ A C V A+G+ M +V+S + +++ G +R +KEA ++
Sbjct: 175 TVTAIISALCSRGHVKRALGV---MHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVI 231
Query: 151 QEMNSKGLAPDSVTYNTLITAM-SKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
Q+M S G+ PD +N+L+T + +N N R P
Sbjct: 232 QDMKSAGITPDLFCFNSLLTCLCERNVN---------------RNPSGL----------- 265
Query: 210 TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
V +A + EM + +P+ ++YN L+ RV+++ I M G PD
Sbjct: 266 ---VPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGS 322
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
++ G K ++ EM+ERG P Y LI LC R++ A LF +M
Sbjct: 323 YYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMK 382
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
+ Y L+ C G F K L +E +
Sbjct: 383 RSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEAL 417
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 19/206 (9%)
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
+DA+GIF+ + D +I+ C G +++A + + Y L
Sbjct: 155 EDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSL 214
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYC-------LVGEFSKAFHLRD 361
+ QR + EA + ++M G++P + + +L+ C G +A ++
Sbjct: 215 LFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIML 274
Query: 362 EMIHKGFLPDFVTEFSPSLVTYNALIYGNCL--LGRVEEALGILRGMAEMSLSPDDVSYN 419
EM + + + P+ ++YN L+ +CL RV E+ IL M PD SY
Sbjct: 275 EM--RSY------KIQPTSMSYNILL--SCLGRTRRVRESCQILEQMKRSGCDPDTGSYY 324
Query: 420 IVISGFCKLGELGKAFELMVEMDEAG 445
V+ G GK +++ EM E G
Sbjct: 325 FVVRVLYLTGRFGKGNQIVDEMIERG 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 50 VSEMNRKGLDPARESLIHLLCCDQLQNDN---------AYKVLSEMVNSGFLPSVATYNV 100
+ +M G+ P LL C +N N A ++ EM + P+ +YN+
Sbjct: 231 IQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNI 290
Query: 101 LLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
LL R +RV E+ IL M +P+ S+ V+ L R + +++ EM +G
Sbjct: 291 LLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERG 350
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT-YNVDKA 216
P+ Y LI + V A+ L+++MK+ + Y LI LC N +K
Sbjct: 351 FRPERKFYYDLIGVLC-GVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKG 409
Query: 217 YKVFTEMIA 225
+++ E ++
Sbjct: 410 RELWEEALS 418
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 173/395 (43%), Gaps = 38/395 (9%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK--NTNLVIRAIALY 186
++N ++D L R EL+ EMN K VT +T+ M + + +A+ +
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMN-KNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF 226
Query: 187 DQM-KQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
+M K + SL+ L N ++ A++VF ++ + +P T+N LIH +C
Sbjct: 227 LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCK 285
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
+ DA + M TPD V + + +CK G+ + EM EM E G PN T
Sbjct: 286 ARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVT 345
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
Y+ ++ L ++++EA ++ +M G P Y +L+ G F A + ++M
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMT 405
Query: 365 HKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAE---MSLSPDDVSYNIV 421
++G D ++ YN +I R E AL +L+ M + S SP+ +Y +
Sbjct: 406 NQGVRRD--------VLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPL 457
Query: 422 ISGFCKLGE---LGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAE 478
+ C + LG MV+ D + +D++ + L++GL C
Sbjct: 458 LKMCCHKKKMKLLGILLHHMVKNDVS-----IDVSTYILLIRGL-------------CMS 499
Query: 479 GEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
G+V +A + +E G + ML D +KK
Sbjct: 500 GKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKK 534
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 7/278 (2%)
Query: 99 NVLLHAYCRDKRVDEAMGILRGM--AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
N L+ A ++ ++ A + + ++P+ +FN +I G C R+ +A ++ M
Sbjct: 243 NSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVT 302
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDK 215
PD VTY + + A K + R + ++M++ TYT ++H L + V +
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFR-RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAE 361
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
A V+ +M G P Y+ LIH R +DA IF M ++G+ D ++ NT+I+
Sbjct: 362 ALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMIS 421
Query: 276 FFCKYGELEKAFEMRAEMVE---RGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
+ E A + M + PN +TY+ L+ C ++++ L M+
Sbjct: 422 AALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKND 481
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP 370
+S Y L+ C+ G+ +A +E + KG +P
Sbjct: 482 VSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 10/264 (3%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRD---KRVDEAMGILRGM 121
LIH C + + D+A ++ M + F P V TY + AYC++ +RV+E + +R
Sbjct: 279 LIHGFCKAR-KFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMREN 337
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
PNVV++ V+ L +++ EA + ++M G PD+ Y++LI +SK T
Sbjct: 338 GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK-TGRFKD 396
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDK-AYKVFTEMIASGFE---PSLVTYNE 237
A +++ M Q + Y ++I ++ D+ A ++ M E P++ TY
Sbjct: 397 AAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAP 456
Query: 238 LIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG 297
L+ C + +++ + M ++ D LI C G++E+A E V +G
Sbjct: 457 LLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKG 516
Query: 298 ILPNADTYSKLIDCLCPQRRLSEA 321
++P T L+D L ++ ++EA
Sbjct: 517 MVPRDSTCKMLVDEL-EKKNMAEA 539
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 136/325 (41%), Gaps = 17/325 (5%)
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN--TNLVIRAI 183
N ++N I + K+ L EM +G T+ +I + TN+ IR
Sbjct: 677 NSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRT- 735
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTY---NVDKAYKVFTEMIASGFEPSLVTYNELIH 240
+ +MK + +T+ LI +LC NV++A + F EMI SGF P + +
Sbjct: 736 --FKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLG 793
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
C +DA + G P V + I C+ G+LE+A A L
Sbjct: 794 CLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLL 852
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
+ TY ++ L + L +A D M G P + Y +L+ + + K
Sbjct: 853 DQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETC 912
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
+M + PS+VTY A+I G LG+VEEA R M E SPD +Y+
Sbjct: 913 QKMEGESC--------EPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSK 964
Query: 421 VISGFCKLGELGKAFELMVEMDEAG 445
I+ C+ + A +L+ EM + G
Sbjct: 965 FINCLCQACKSEDALKLLSEMLDKG 989
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 192/510 (37%), Gaps = 75/510 (14%)
Query: 51 SEMNRKGLDPARESLIHLLCCDQLQND--NAYKVLSEMVNSGFLPSVATYNVLLHAYCRD 108
+EM G++P ++ ++ QN A+KV S M G P+ +Y++ + CR
Sbjct: 457 NEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRS 516
Query: 109 KRVDEAMGILRGMAVEPNVVS---FNTVIDGL---CAKRRI-------KEAEELLQEMNS 155
R DE + I M V+ F+ VI + K +I K + E+N
Sbjct: 517 SRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNG 576
Query: 156 KGLA--------------PDSVTYNTLITAMSKNTNLVIRAI--ALYDQMKQQRIPVPWT 199
G A P V + L A+S + ++ I L +R
Sbjct: 577 SGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALE 636
Query: 200 TYTSLIHLLCTYNVDKAYKV-------FTEMIA--SGFEPSLVTYNELIHAYCCRDRVQD 250
T V + K+ F + +G++ + YN I C +
Sbjct: 637 KSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQ 696
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
+F M +G +I + + G A EM + G++P++ T+ LI
Sbjct: 697 MRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLIT 756
Query: 311 CLCPQ--RRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
LC + R + EA FREM+ G P + +G C VG A D + GF
Sbjct: 757 VLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF 816
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
P V Y+ I C +G++EEAL L D +Y ++ G +
Sbjct: 817 ---------PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQR 867
Query: 429 GELGKAFELMVEMDEAGGIRGVDLAVFSSL-------------------MKGLSDE---V 466
G+L KA + + M E G GV V++SL M+G S E V
Sbjct: 868 GDLQKALDKVNSMKEIGTKPGVH--VYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVV 925
Query: 467 NYNSVINAYCAEGEVSKALILHDEMEHHGS 496
Y ++I Y + G+V +A ME G+
Sbjct: 926 TYTAMICGYMSLGKVEEAWNAFRNMEERGT 955
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 14/264 (5%)
Query: 49 TVSEMNRKGLDPARES---LIHLLCCDQLQN-DNAYKVLSEMVNSGFLPSVATYNVLLHA 104
T EM GL P+ + LI +LC + +N + A + EM+ SGF+P L
Sbjct: 735 TFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGC 794
Query: 105 YCRDKRVDEAMGILR--GMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS---KGLA 159
C +A L G P V+++ I LC RI + EE L E+ S +
Sbjct: 795 LCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALC---RIGKLEEALSELASFEGERSL 851
Query: 160 PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI-HLLCTYNVDKAYK 218
D TY +++ + + +L +A+ + MK+ YTSLI + ++K +
Sbjct: 852 LDQYTYGSIVHGLLQRGDLQ-KALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
+M EPS+VTY +I Y +V++A FR M +RG +PD + I C
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLC 970
Query: 279 KYGELEKAFEMRAEMVERGILPNA 302
+ + E A ++ +EM+++GI P+
Sbjct: 971 QACKSEDALKLLSEMLDKGIAPST 994
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 141/680 (20%), Positives = 254/680 (37%), Gaps = 136/680 (20%)
Query: 53 MNRKGLDPARESLIHLLCCDQLQNDNAYKVLSE---MVNSGFLPSVATYNVLLHAYCRDK 109
M R+ LD + ++ ++ L+ ++ K L + + SG P V+TY ++ + K
Sbjct: 390 MKRRKLDDS--NVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLK 447
Query: 110 RVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
+ ++ + M +EP+ V+ V+ G + R+ EA ++ M KG+ P +Y+
Sbjct: 448 QFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYS 507
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPV-----PWTTYT-------SLIHLLCTYNVD 214
+ + +++ I +++QM +I + W + IHL+ +
Sbjct: 508 IFVKELCRSSRY-DEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLI--KEIQ 564
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ--------------DAMGIFRGMPD 260
K + + + + EL+ Y C VQ D I R +
Sbjct: 565 KRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSS 624
Query: 261 R---------------GLTPDAVI---------CNTLITFFCKYGELE------------ 284
TP+ V+ N ++ FF G+
Sbjct: 625 SRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMS 684
Query: 285 -------KAF-EMRA---EMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
K F +MR+ EM +G L DT++ +I + A F+EM GL
Sbjct: 685 IKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGL 744
Query: 334 SPREYAYFNLVGAYCL-----VGEFSKAFHLRDEMIHKGFLPD--FVTEFSPSLVTYNAL 386
P + L+ C V E ++ F EMI GF+PD V ++ L
Sbjct: 745 IPSSSTFKCLITVLCEKKGRNVEEATRTFR---EMIRSGFVPDRELVQDYLGCL------ 795
Query: 387 IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGG 446
C +G ++A L + ++ P V+Y+I I C++G+L +A
Sbjct: 796 ----CEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALS---------- 840
Query: 447 IRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIML 506
+LA F + L D+ Y S+++ G++ KAL + M+ G+ +Y L
Sbjct: 841 ----ELASFEG-ERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSL 895
Query: 507 FDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGL 566
F K+ + E+ +M + C TY +I C G+ G
Sbjct: 896 IVYFFKEKQLEKVLETCQKMEGESCEP-SVVTYTAMI--C-------------GYMSLGK 939
Query: 567 KNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLA 626
EA + + + PD Y+ I C+ + A + EM+ G A +
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 627 LIKALFHVGRHNEVRRVIQN 646
+ L G+H+ R +Q
Sbjct: 1000 VFYGLNREGKHDLARIALQK 1019
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 151/339 (44%), Gaps = 12/339 (3%)
Query: 30 SLESEPKKVTSGGLLKTTTTVSEMNRKG--LDPARESLIHLLCCDQLQNDNAYKVLSEMV 87
S+ + KK+ G L+ +M + G LD +++ C + D A + EM+
Sbjct: 232 SVYGKAKKIGKGLLV-----FEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMM 286
Query: 88 NSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVV---SFNTVIDGLCAKRRIK 144
G + TY +LL + ++VD I M + +F ++ C +IK
Sbjct: 287 EKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIK 346
Query: 145 EAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSL 204
EA EL++E+ +K + D+ + L+ + + N ++ A+ + D MK++++ +
Sbjct: 347 EALELIRELKNKEMCLDAKYFEILVKGLCR-ANRMVDALEIVDIMKRRKLDDSNVYGIII 405
Query: 205 IHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLT 264
L +V KA + F + SG P + TY E++ + + +F M + G+
Sbjct: 406 SGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIE 465
Query: 265 PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
PD+V ++ + +A+++ + M E+GI P +YS + LC R E +
Sbjct: 466 PDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKI 525
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
F +M + R+ + ++ + GE K HL E+
Sbjct: 526 FNQMHASKIVIRDDIFSWVISSMEKNGEKEK-IHLIKEI 563
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 160/394 (40%), Gaps = 57/394 (14%)
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
+NT++ R + +EL+ EM G D T+ LI+ K + + + ++++M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKK-IGKGLLVFEKM 250
Query: 190 KQQRIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYN------------ 236
++ + T Y +I LC D A + + EM+ G L TY
Sbjct: 251 RKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKV 310
Query: 237 -----------------------ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
L+ ++C ++++A+ + R + ++ + DA L
Sbjct: 311 DVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEIL 370
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
+ C+ + A E+ ++++R L +++ Y +I Q +S+A + F + G
Sbjct: 371 VKGLCRANRMVDALEI-VDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGR 429
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
PR Y ++ + +F K +L +EMI G PD V A++ G+
Sbjct: 430 PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDS--------VAITAVVAGHLGQ 481
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL- 452
RV EA + M E + P SY+I + C+ + ++ +M + + D+
Sbjct: 482 NRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIF 541
Query: 453 -AVFSSLMKG-------LSDEVNYNSVINAYCAE 478
V SS+ K L E+ S N+YC E
Sbjct: 542 SWVISSMEKNGEKEKIHLIKEIQKRS--NSYCDE 573
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 164/365 (44%), Gaps = 22/365 (6%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTV 133
D +++SEM +G + T+ +L+ Y + K++ + + + +R E + ++N +
Sbjct: 206 DMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIM 265
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL-VIRAIALYDQMKQQ 192
I LC R A E +EM KG+ TY L+ ++K+ + V+++IA D M
Sbjct: 266 IRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIA--DDM--V 321
Query: 193 RIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSL---VTYNELIHAYCCR-DRV 248
RI + + + +LL ++ V K E+I + Y E++ CR +R+
Sbjct: 322 RI-CEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 380
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
DA+ I M R L D+ + +I+ + + ++ KA E + + G P TY+++
Sbjct: 381 VDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEI 439
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
+ L ++ + +LF EM+ G+ P A +V + ++A+ + M KG
Sbjct: 440 MQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKG- 498
Query: 369 LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
P+ +Y+ + C R +E + I M + D ++ VIS K
Sbjct: 499 -------IKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKN 551
Query: 429 GELGK 433
GE K
Sbjct: 552 GEKEK 556
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 129/306 (42%), Gaps = 33/306 (10%)
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
N+D ++ +EM +G + + T+ LI Y ++ + +F M G DA N
Sbjct: 204 NLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYN 263
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
+I C G + A E EM+E+GI TY L+DC+ ++ + +M+
Sbjct: 264 IMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRI 323
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
A+ L+ ++C+ G+ +A L E+ +K E + L+ G C
Sbjct: 324 CEISEHDAFGYLLKSFCVSGKIKEALELIRELKNK--------EMCLDAKYFEILVKGLC 375
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
R+ +AL I+ M L +V Y I+ISG+ + ++ KA E + ++G R
Sbjct: 376 RANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSG--RPPR 432
Query: 452 LAVFSSLMKGL----------------------SDEVNYNSVINAYCAEGEVSKALILHD 489
++ ++ +M+ L D V +V+ + + V++A +
Sbjct: 433 VSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFS 492
Query: 490 EMEHHG 495
ME G
Sbjct: 493 SMEEKG 498
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 158/419 (37%), Gaps = 64/419 (15%)
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR-GLTPDAVICNTLITFFCKY 280
E ++ FEP +V N L C AM F + + G + I NT+++ +
Sbjct: 147 EKLSFRFEPEIVE-NVLKR---CFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEA 202
Query: 281 GELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
L+ E+ +EM + G + T++ LI +++ + +F +M G AY
Sbjct: 203 RNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAY 262
Query: 341 FNLVGAYCLVGEFSKAFHLRDEMIHKGFL------------------PDFVTEFSPSLV- 381
++ + C+ G A EM+ KG D V + +V
Sbjct: 263 NIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR 322
Query: 382 --------TYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
+ L+ C+ G+++EAL ++R + + D + I++ G C+ +
Sbjct: 323 ICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVD 382
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
A E++ M + L D Y +I+ Y + +VSKAL + ++
Sbjct: 383 ALEIVDIMKR----------------RKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKK 426
Query: 494 HGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKS 553
G Y + K L+ F C ++ +IEN + +
Sbjct: 427 SGRPPRVSTYTEIMQHLFK-----------LKQFEKGCN-----LFNEMIENGIEPDSVA 470
Query: 554 VVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
+ + G + EA V +++ + KP Y+ + E CR D+ ++ +M
Sbjct: 471 ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 41 GGLLKTTTTVSEMNRKGLDPARESLIHLLC--CDQLQNDNAYKVLSEMVNSGFLPSVATY 98
G L K V+ M G P L+ + Q + + +M PSV TY
Sbjct: 868 GDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTY 927
Query: 99 NVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
++ Y +V+EA R M P+ +++ I+ LC + ++A +LL EM
Sbjct: 928 TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLD 987
Query: 156 KGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
KG+AP ++ + T+ +++ + IAL
Sbjct: 988 KGIAPSTINFRTVFYGLNREGKHDLARIAL 1017
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 175/435 (40%), Gaps = 77/435 (17%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL---RGMAVEPNVVSFNTVI- 134
A K+L +M G +P++ TYN L+ Y + +A+GIL + EPN ++++T +
Sbjct: 203 AEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALL 262
Query: 135 ------DGLCA------------KRRIK-------EAE---------------------- 147
DG+ A KR I E E
Sbjct: 263 VYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVK 322
Query: 148 ---------ELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW 198
+LL M+S G+ P + LI A ++ + ++ LY +++++ +
Sbjct: 323 DDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIV-GKELYKRIRERFSEISL 381
Query: 199 TTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRG 257
+ LI L+ A +++ +++ G EP+ ++Y ++ + GI+R
Sbjct: 382 SVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRW 441
Query: 258 -------MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
M D+GL P N ++ K E A ++ MV+ G P +Y L+
Sbjct: 442 GVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLS 501
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP 370
L + EAF ++ M+ G+ P YAY + +F+ L EM KG
Sbjct: 502 ALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKG--- 558
Query: 371 DFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGE 430
PS+VT+NA+I G G A M ++ P++++Y ++I +
Sbjct: 559 -----IEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAK 613
Query: 431 LGKAFELMVEMDEAG 445
A+EL V+ G
Sbjct: 614 PRLAYELHVKAQNEG 628
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 126/294 (42%), Gaps = 14/294 (4%)
Query: 53 MNRKGLDPARESLIHLL-CCDQLQNDNAYKVLSEMVNSGFLP-SVATYNVLLHAYCRDKR 110
M+ G+ P+RE L+ C + ++ K L + + F S++ N L+ + K+
Sbjct: 337 MDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKK 396
Query: 111 VDEAMGILRGM---AVEPNVVSFNTVIDGL------CAKRRI-KEAEELLQEMNSKGLAP 160
A+ I + EPN +S+ V+ +KR I + LL +M KGL P
Sbjct: 397 WWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKP 456
Query: 161 DSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV-DKAYKV 219
+N ++ A SK + AI ++ M +Y +L+ L + D+A++V
Sbjct: 457 QRRHWNAVLVACSKASE-TTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRV 515
Query: 220 FTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCK 279
+ MI G EP+L Y + + + + + M +G+ P V N +I+ +
Sbjct: 516 WNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCAR 575
Query: 280 YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
G A+E M + PN TY LI+ L + A++L + GL
Sbjct: 576 NGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGL 629
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/495 (20%), Positives = 188/495 (37%), Gaps = 76/495 (15%)
Query: 88 NSGFLPSVATYNVLLHAYCRDKRVDEAMGIL---------RGMAVEPNVVSFNTVIDGLC 138
+ G LP + + ++ + +DKR+ A+ ++ G + PN+ +N++ L
Sbjct: 140 DKGELP-LQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSL---LG 195
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI-PVP 197
A R EAE++L++M +G+ P+ VTYNTL+ + ++A+ + D K++ P P
Sbjct: 196 AMRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEF-LKALGILDLTKEKGFEPNP 254
Query: 198 WTTYTSLIHLLCTYNVDKAYKVFTEM------------IASGFEPSLVTYNELIHAYCC- 244
T T+L+ + A + F E+ + +E V I C
Sbjct: 255 ITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQ 314
Query: 245 ---RDRVQD------AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE 295
R V+D + + M G+ P LI + E+ + E
Sbjct: 315 VMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRE 374
Query: 296 RGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY------FN-LVGAYC 348
R + + LI + ++ A +++ ++L G P +Y FN L+ A
Sbjct: 375 RFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAAS 434
Query: 349 LVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAE 408
G + L ++M KG P +NA++ A+ I + M +
Sbjct: 435 KRGIWRWGVRLLNKMEDKG--------LKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486
Query: 409 MSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG----------------GIRGVDL 452
P +SY ++S K +AF + M + G G + +L
Sbjct: 487 NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNL 546
Query: 453 AVFSSLMKGLSDE------VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIML 506
+L+K ++ + V +N+VI+ G A M+ + Y ML
Sbjct: 547 --LDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEML 604
Query: 507 FDGFDKKARTRGAKE 521
+ A+ R A E
Sbjct: 605 IEALANDAKPRLAYE 619
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 117 ILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNT 176
++R ++ + +N +I GLC + EA + + GL PD TYN +I S
Sbjct: 4 VMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS--- 60
Query: 177 NLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTY 235
+ RA LY +M ++ + TY S+IH LC N + +A KV S T+
Sbjct: 61 --LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTF 109
Query: 236 NELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE 295
N LI+ YC RV+D M +F M RG+ + + TLI F + G+ A ++ EMV
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Query: 296 RGILPNADTYSKLIDCLCPQRRLSEA 321
G+ ++ T+ ++ LC ++ L +A
Sbjct: 170 NGVYSSSITFRDILPQLCSRKELRKA 195
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 24/226 (10%)
Query: 80 YKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTVIDG 136
+KV+ E S A YN+++H C+ + DEA I + + +P+V ++N +I
Sbjct: 2 FKVMRE---SNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF 58
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV 196
R AE+L EM +GL PD++TYN++I + K L + +++
Sbjct: 59 SSLGR----AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLA----------QARKVSK 104
Query: 197 PWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
+T+ +LI+ C V +F EM G +++TY LIH + A+ IF
Sbjct: 105 SCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIF 164
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM---RAEMVERGI 298
+ M G+ ++ ++ C EL KA M ++ MV +
Sbjct: 165 QEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQKSSMVSNNV 210
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 23/223 (10%)
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
+F M S + YN +IH C + +A IF + GL PD N +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
++ L +A ++ AEM+ RG++P+ TY+ +I LC Q +L++A + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV----------SKSC 106
Query: 339 AYFN-LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+ FN L+ YC +L EM +G + + ++TY LI+G +G
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVAN--------VITYTTLIHGFRQVGDFN 158
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
AL I + M + +++ ++ C EL KA ++++
Sbjct: 159 TALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
++ M++ + + Y +IH LC D+A +FT ++ SG +P + TYN +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
+ A ++ M RGL PD + N++I CK +L +A R + +
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
T++ LI+ C R+ + +LF EM G+ Y L+ + VG+F+ A + EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 364 IHKGFLPDFVT 374
+ G +T
Sbjct: 168 VSNGVYSSSIT 178
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 58 LDPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLH--AYCRDKRVDEAM 115
+D A ++I C + D A + + ++ SG P V TYN+++ + R +++ M
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEM 71
Query: 116 GILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN 175
I RG+ P+ +++N++I GLC + ++ +A + ++ T+NTLI K
Sbjct: 72 -IRRGLV--PDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTLINGYCKA 119
Query: 176 TNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVT 234
T V + L+ +M ++ I TYT+LIH + + A +F EM+++G S +T
Sbjct: 120 TR-VKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 235 YNELIHAYCCRDRVQDAMGIF 255
+ +++ C R ++ A+ +
Sbjct: 179 FRDILPQLCSRKELRKAVAML 199
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 36/234 (15%)
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
+F+ M + + D N +I CK G+ ++A + ++ G+ P+ TY+ +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
L A L+ EM+ GL P Y +++ C + ++A
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA----------------- 99
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
+ S S T+N LI G C RV++ + + M + + ++Y +I GF ++G+
Sbjct: 100 RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNT 159
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALIL 487
A ++ EM G V+SS + + ++ C+ E+ KA+ +
Sbjct: 160 ALDIFQEMVSNG--------VYSS-------SITFRDILPQLCSRKELRKAVAM 198
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 29/193 (15%)
Query: 383 YNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
YN +I+G C G+ +EA I + L PD +YN++I + LG+A +L EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 443 EAGGIRGVDLAVFSSLMKGLSDE-------------VNYNSVINAYCAEGEVSKALILHD 489
G + D ++S++ GL + +N++IN YC V + L
Sbjct: 73 RRGLVP--DTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFC 130
Query: 490 EMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLC-----TSLPTFTYDTLIE 544
EM G + + Y L GF R G + L +F ++ +S TF D L +
Sbjct: 131 EMYRRGIVANVITYTTLIHGF----RQVGDFNTALDIFQEMVSNGVYSSSITFR-DILPQ 185
Query: 545 NCSNNEFKSVVEL 557
CS E + V +
Sbjct: 186 LCSRKELRKAVAM 198
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 143/327 (43%), Gaps = 19/327 (5%)
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
P + + + L + ++ + ++L++M L T +I KN + V +A+
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGH-VDQAVE 167
Query: 185 LYDQMK-----QQRIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNEL 238
L++ + QQ + V Y SL+H LC + AY + MI G +P TY L
Sbjct: 168 LFNGVPKTLGCQQTVDV----YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAIL 223
Query: 239 IHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
++ +C ++++A M RG P A + LI G LE A EM ++M + G
Sbjct: 224 VNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGF 283
Query: 299 LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
+P+ T++ LI+ + + +++ GL Y L+ A +G+ +AF
Sbjct: 284 VPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFR 343
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
L + + G P PSL Y +I G C G ++A M + P+ Y
Sbjct: 344 LLNNCVEDGHKP------FPSL--YAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVY 395
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAG 445
++I+ + G+ A +VEM E G
Sbjct: 396 TMLITMCGRGGKFVDAANYLVEMTEMG 422
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 6/253 (2%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA- 122
SL+H LC D AY ++ M+ G P TY +L++ +C ++ EA L M+
Sbjct: 187 SLLHALC-DVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR 245
Query: 123 --VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
P + +I+GL ++ A+E++ +M G PD T+N LI A+SK+ +
Sbjct: 246 RGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEF 305
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELI 239
I +Y + + V TY +LI + +D+A+++ + G +P Y +I
Sbjct: 306 -CIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPII 364
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL 299
C DA F M + P+ + LIT + G+ A EM E G++
Sbjct: 365 KGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLV 424
Query: 300 PNADTYSKLIDCL 312
P + + + D L
Sbjct: 425 PISRCFDMVTDGL 437
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 11/309 (3%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAM----GILRGMAVEPNVVSFNT 132
++ +K+L +M + S T ++ Y ++ VD+A+ G+ + + + V +N+
Sbjct: 128 ESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNS 187
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ 192
++ LC + A L++ M KGL PD TY L+ + A D+M ++
Sbjct: 188 LLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMK-EAQEFLDEMSRR 246
Query: 193 RIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
P LI LL ++ A ++ ++M GF P + T+N LI A V+
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFC 306
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ ++ GL D TLI K G++++AF + VE G P Y+ +I
Sbjct: 307 IEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKG 366
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP- 370
+C +AF F +M P Y L+ G+F A + EM G +P
Sbjct: 367 MCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPI 426
Query: 371 ----DFVTE 375
D VT+
Sbjct: 427 SRCFDMVTD 435
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 43/236 (18%)
Query: 383 YNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
YN+L++ C + A ++R M L PD +Y I+++G+C G++ +A E + EM
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 443 EAG---GIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRA 499
G RG DL L++GL +NA G + A + +M G +
Sbjct: 245 RRGFNPPARGRDL-----LIEGL---------LNA----GYLESAKEMVSKMTKGGFVPD 286
Query: 500 SVLYIMLFDGFDKKARTRGAKESLLRMFYDLCT---SLPTFTYDTLIENCSNNEFKSVVE 556
+ +L + K G E + M+Y C + TY TLI S
Sbjct: 287 IQTFNILIEAISKS----GEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKI------- 335
Query: 557 LAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
G +EA +LN ++ +KP ++Y +I CR D A++ + +M
Sbjct: 336 --------GKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDM 383
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 205/485 (42%), Gaps = 81/485 (16%)
Query: 51 SEMNRKGLDPARESLIHLLCC-------DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLH 103
S+M ++G++P R ++ L ++ + +A +++ M L + LL+
Sbjct: 263 SDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTS-----LLN 317
Query: 104 AYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSV 163
YC+ ++ A + M E +VV++N +I G + +++A + Q M + L D V
Sbjct: 318 FYCKVGLIEYAEMVFDRM-FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCV 376
Query: 164 TYNTLITAMSKNTNLVI-RAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTE 222
T TL++A ++ NL + + + Y + + ++ C VD A KVF
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVD-AKKVFD- 434
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
S E L+ +N L+ AY +A+ +F GM G+ P+ + N +I + G+
Sbjct: 435 ---STVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY-- 340
+++A +M +M GI+PN +++ +++ + EA R+M GL P ++
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
Query: 341 ----------------------------------FNLVGAYCLVGEFSKAFHLRDEMIHK 366
+LV Y G+ +KA K
Sbjct: 552 ALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA--------EK 603
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
F +E S NA+I L G ++EA+ + R + + L PD+++ V+S
Sbjct: 604 VFGSKLYSELPLS----NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACN 659
Query: 427 KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALI 486
G++ +A E+ D+ S+ L +Y +++ + GE KAL
Sbjct: 660 HAGDINQAIEIF-----------TDIVSKRSMKPCLE---HYGLMVDLLASAGETEKALR 705
Query: 487 LHDEM 491
L +EM
Sbjct: 706 LIEEM 710
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 133/324 (41%), Gaps = 40/324 (12%)
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
++ SG E + + L Y + DA +F +PDR +AV N L+ + + G+
Sbjct: 199 VVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGK 254
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
E+A + ++M ++G+ P T S + + E + G+ +
Sbjct: 255 NEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTS 314
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
L+ YC VG A + D M F +VT+N +I G G VE+A+ +
Sbjct: 315 LLNFYCKVGLIEYAEMVFDRM------------FEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLG--ELGK---------AFE--------LMVEMDE 443
+ M L D V+ ++S + +LGK +FE +M +
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAK 422
Query: 444 AGGIRGVDL-AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVL 502
G I VD VF S ++ D + +N+++ AY G +AL L M+ G +
Sbjct: 423 CGSI--VDAKKVFDSTVE--KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT 478
Query: 503 YIMLFDGFDKKARTRGAKESLLRM 526
+ ++ + + AK+ L+M
Sbjct: 479 WNLIILSLLRNGQVDEAKDMFLQM 502
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 161/349 (46%), Gaps = 22/349 (6%)
Query: 101 LLHAYCRDKRVDEAMGILRGMAV----EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
LLH + D R A+GIL+ + + +++ +D L ++ +E ++ M
Sbjct: 93 LLHRFRDDWR--SALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGD 150
Query: 157 GLAPDSVTYNTLITAMSK--NTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVD 214
L VT NT+ M + A+ ++D++ + + + L+ LC
Sbjct: 151 KL----VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRV 206
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
+ +V + S P+ T+N IH +C +RV++A+ + M G P + T+I
Sbjct: 207 EQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTII 266
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+C+ E K +EM +EM G PN+ TY+ ++ L Q+ EA + M G
Sbjct: 267 RCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRD-EMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
P + ++N CL+ ++A L + E + + +P+ + S TYN++I C
Sbjct: 327 P-DSLFYN-----CLIHTLARAGRLEEAERVFRVEMPELGVSINTS--TYNSMIAMYCHH 378
Query: 394 GRVEEALGILRGMAEMSL-SPDDVSYNIVISGFCKLGELGKAFELMVEM 441
++A+ +L+ M +L +PD +Y ++ K G++ + +L+ EM
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 167/432 (38%), Gaps = 86/432 (19%)
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
DR+++ + RG D+ +T + V ++ F GE E+A + + E G+ N ++
Sbjct: 138 DRMKEFVERMRG--DKLVTLNTVA--KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESM 193
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+ L+D LC ++R+ +A
Sbjct: 194 NLLLDTLCKEKRVEQA-------------------------------------------- 209
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
+ L + +P+ T+N I+G C RVEEAL ++ M P +SY +I +
Sbjct: 210 RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCY 269
Query: 426 CKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKAL 485
C+ E K +E++ EM+ G + + Y +++++ A+ E +AL
Sbjct: 270 CQQFEFIKVYEMLSEMEANGSP---------------PNSITYTTIMSSLNAQKEFEEAL 314
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE- 544
+ M+ G S+ Y L + R A+ +L S+ T TY+++I
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 545 NCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKP-------------------- 584
C ++E +EL K L N +L+ +K
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
Query: 585 -DGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRV 643
D + Y FLI CR + AY ++ EM+ + L L++ + H R
Sbjct: 435 LDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAER- 493
Query: 644 IQNVLRSCNING 655
I++++++ +
Sbjct: 494 IEHIMKTVKLTA 505
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 123/296 (41%), Gaps = 79/296 (26%)
Query: 57 GLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA 114
GL+ ES+ LL C + + + A VL ++ S P+ T+N+ +H +C+ RV+EA
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 115 MGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITA 171
+ ++G P V+S+ T+I C + + E+L EM + G P+S+TY T++++
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 172 MSKNT------------------------NLVIRAIALYDQMKQQ----RIPVP------ 197
++ N +I +A ++++ R+ +P
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 198 -WTTYTSLIHLLCTYNV-DKAYKVFTEMIASG--------FEPSL--------------- 232
+TY S+I + C ++ DKA ++ EM +S ++P L
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 233 --------------VTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
TY LI C + + A +F M + +TP C L+
Sbjct: 424 LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 161/349 (46%), Gaps = 22/349 (6%)
Query: 101 LLHAYCRDKRVDEAMGILRGMAV----EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
LLH + D R A+GIL+ + + +++ +D L ++ +E ++ M
Sbjct: 93 LLHRFRDDWR--SALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGD 150
Query: 157 GLAPDSVTYNTLITAMSK--NTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVD 214
L VT NT+ M + A+ ++D++ + + + L+ LC
Sbjct: 151 KL----VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRV 206
Query: 215 KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
+ +V + S P+ T+N IH +C +RV++A+ + M G P + T+I
Sbjct: 207 EQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTII 266
Query: 275 TFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+C+ E K +EM +EM G PN+ TY+ ++ L Q+ EA + M G
Sbjct: 267 RCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRD-EMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
P + ++N CL+ ++A L + E + + +P+ + S TYN++I C
Sbjct: 327 P-DSLFYN-----CLIHTLARAGRLEEAERVFRVEMPELGVSINTS--TYNSMIAMYCHH 378
Query: 394 GRVEEALGILRGMAEMSL-SPDDVSYNIVISGFCKLGELGKAFELMVEM 441
++A+ +L+ M +L +PD +Y ++ K G++ + +L+ EM
Sbjct: 379 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 167/432 (38%), Gaps = 86/432 (19%)
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
DR+++ + RG D+ +T + V ++ F GE E+A + + E G+ N ++
Sbjct: 138 DRMKEFVERMRG--DKLVTLNTVA--KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESM 193
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+ L+D LC ++R+ +A
Sbjct: 194 NLLLDTLCKEKRVEQA-------------------------------------------- 209
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
+ L + +P+ T+N I+G C RVEEAL ++ M P +SY +I +
Sbjct: 210 RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCY 269
Query: 426 CKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKAL 485
C+ E K +E++ EM+ G + + Y +++++ A+ E +AL
Sbjct: 270 CQQFEFIKVYEMLSEMEANGSP---------------PNSITYTTIMSSLNAQKEFEEAL 314
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIE- 544
+ M+ G S+ Y L + R A+ +L S+ T TY+++I
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 545 NCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKP-------------------- 584
C ++E +EL K L N +L+ +K
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
Query: 585 -DGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRV 643
D + Y FLI CR + AY ++ EM+ + L L++ + H R
Sbjct: 435 LDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAER- 493
Query: 644 IQNVLRSCNING 655
I++++++ +
Sbjct: 494 IEHIMKTVKLTA 505
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 123/296 (41%), Gaps = 79/296 (26%)
Query: 57 GLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA 114
GL+ ES+ LL C + + + A VL ++ S P+ T+N+ +H +C+ RV+EA
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 115 MGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITA 171
+ ++G P V+S+ T+I C + + E+L EM + G P+S+TY T++++
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 172 MSKNT------------------------NLVIRAIALYDQMKQQ----RIPVP------ 197
++ N +I +A ++++ R+ +P
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 198 -WTTYTSLIHLLCTYNV-DKAYKVFTEMIASG--------FEPSL--------------- 232
+TY S+I + C ++ DKA ++ EM +S ++P L
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 233 --------------VTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
TY LI C + + A +F M + +TP C L+
Sbjct: 424 LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 161/375 (42%), Gaps = 47/375 (12%)
Query: 97 TYNVLLHAYCRDKRVDEAMGILR----GMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
+++ LL ++ ++ A I R G V + + N ++ LC R A ++ QE
Sbjct: 118 SFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQE 177
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN 212
MN +G PD +Y L ++ L ++++ HLL
Sbjct: 178 MNYQGCYPDRDSYRIL-----------MKGFCLEGKLEEA------------THLL---- 210
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL-TPDAVICN 271
Y +F + G +V Y L+ A C V DA+ I + +GL P +
Sbjct: 211 ----YSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 272 TLITFFCKYGE-LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
+ E +E+ + E + RG +P D+YS + L + +L E ++ M
Sbjct: 267 IEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRS 326
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
G P + Y V A C G+ +A + ++ + +G P++ YN LI G
Sbjct: 327 KGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL-------PTVGVYNVLIKGL 379
Query: 391 CLLGRVEEALGILRGMA-EMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
C G+ EA+G L+ M+ ++S ++ +Y ++ G C+ G+ +A ++M EM G
Sbjct: 380 CDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPG 439
Query: 450 VDLAVFSSLMKGLSD 464
V+ + ++KGL D
Sbjct: 440 VE--TYHMMIKGLCD 452
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 139/319 (43%), Gaps = 11/319 (3%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM-- 121
+L+ + C ++D A +V EM G P +Y +L+ +C + +++EA +L M
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 122 -----AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNT 176
++V + ++D LC + +A E+L ++ KGL Y+ + +++
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 177 NLVIRAIA--LYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVT 234
+ I + L + + + IP + L + + +V M + GFEP+
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFI 335
Query: 235 YNELIHAYCCRDRVQDAMGIF-RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM 293
Y + A C ++++A+ + + M P + N LI C G+ +A +M
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 294 VER-GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE 352
++ + N +TY L+D LC + EA + EML P Y ++ C +
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 353 FSKAFHLRDEMIHKGFLPD 371
+A +EM+ + +P+
Sbjct: 456 RYEAVMWLEEMVSQDMVPE 474
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 193/492 (39%), Gaps = 69/492 (14%)
Query: 160 PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV---PWTTYTSLIHLLCTYN-VDK 215
P +T + L + K N V A+ L+++ K+ R P + Y ++I +L N V +
Sbjct: 7 PRVLTPSLLSQILKKQKNPVT-ALKLFEEAKE-RFPSYGHNGSVYATMIDILGKSNRVLE 64
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
V M E + +I + R++DA+ +F+ + + ++ +TL+
Sbjct: 65 MKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQ 124
Query: 276 FFCKYGELEKAFEM-RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
K ELE A + R + + L+ LC R A +F+EM G
Sbjct: 125 EMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCY 184
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMI----HKGFLPDFVTEFSPSLVTYNALIYGN 390
P +Y L+ +CL G+ +A HL M KG D +V Y L+
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGED--------IVVYRILLDAL 236
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG--KAFELMVEMDEAGGIR 448
C G V++A+ IL + L Y+ + +G + G + L+ E G I
Sbjct: 237 CDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIP 296
Query: 449 GVDLAVFSSLMKGLSDEVN----------------------YNSVINAYCAEGEVSKAL- 485
+D +S++ L +E Y + + A C G++ +A+
Sbjct: 297 CLD--SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVS 354
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN 545
+++ EM L +Y +L G ++ A L +M + TY TL++
Sbjct: 355 VINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDG 414
Query: 546 -CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDK 604
C + +F EA+ V+ +L ++ P Y+ +I C ++D+
Sbjct: 415 LCRDGQFL----------------EASQVMEEMLIKSHFPGVETYHMMIKGLC---DMDR 455
Query: 605 AYNMYM---EMV 613
Y M EMV
Sbjct: 456 RYEAVMWLEEMV 467
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 161/375 (42%), Gaps = 47/375 (12%)
Query: 97 TYNVLLHAYCRDKRVDEAMGILR----GMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
+++ LL ++ ++ A I R G V + + N ++ LC R A ++ QE
Sbjct: 118 SFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQE 177
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN 212
MN +G PD +Y L ++ L ++++ HLL
Sbjct: 178 MNYQGCYPDRDSYRIL-----------MKGFCLEGKLEEA------------THLL---- 210
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL-TPDAVICN 271
Y +F + G +V Y L+ A C V DA+ I + +GL P +
Sbjct: 211 ----YSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHH 266
Query: 272 TLITFFCKYGE-LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
+ E +E+ + E + RG +P D+YS + L + +L E ++ M
Sbjct: 267 IEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRS 326
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
G P + Y V A C G+ +A + ++ + +G P++ YN LI G
Sbjct: 327 KGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL-------PTVGVYNVLIKGL 379
Query: 391 CLLGRVEEALGILRGMA-EMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRG 449
C G+ EA+G L+ M+ ++S ++ +Y ++ G C+ G+ +A ++M EM G
Sbjct: 380 CDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPG 439
Query: 450 VDLAVFSSLMKGLSD 464
V+ + ++KGL D
Sbjct: 440 VE--TYHMMIKGLCD 452
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 139/319 (43%), Gaps = 11/319 (3%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM-- 121
+L+ + C ++D A +V EM G P +Y +L+ +C + +++EA +L M
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 122 -----AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNT 176
++V + ++D LC + +A E+L ++ KGL Y+ + +++
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 177 NLVIRAIA--LYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVT 234
+ I + L + + + IP + L + + +V M + GFEP+
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFI 335
Query: 235 YNELIHAYCCRDRVQDAMGIF-RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM 293
Y + A C ++++A+ + + M P + N LI C G+ +A +M
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 294 VER-GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE 352
++ + N +TY L+D LC + EA + EML P Y ++ C +
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 353 FSKAFHLRDEMIHKGFLPD 371
+A +EM+ + +P+
Sbjct: 456 RYEAVMWLEEMVSQDMVPE 474
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 193/492 (39%), Gaps = 69/492 (14%)
Query: 160 PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPV---PWTTYTSLIHLLCTYN-VDK 215
P +T + L + K N V A+ L+++ K+ R P + Y ++I +L N V +
Sbjct: 7 PRVLTPSLLSQILKKQKNPVT-ALKLFEEAKE-RFPSYGHNGSVYATMIDILGKSNRVLE 64
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
V M E + +I + R++DA+ +F+ + + ++ +TL+
Sbjct: 65 MKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQ 124
Query: 276 FFCKYGELEKAFEM-RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
K ELE A + R + + L+ LC R A +F+EM G
Sbjct: 125 EMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCY 184
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMI----HKGFLPDFVTEFSPSLVTYNALIYGN 390
P +Y L+ +CL G+ +A HL M KG D +V Y L+
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGED--------IVVYRILLDAL 236
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG--KAFELMVEMDEAGGIR 448
C G V++A+ IL + L Y+ + +G + G + L+ E G I
Sbjct: 237 CDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIP 296
Query: 449 GVDLAVFSSLMKGLSDEVN----------------------YNSVINAYCAEGEVSKAL- 485
+D +S++ L +E Y + + A C G++ +A+
Sbjct: 297 CLD--SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVS 354
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN 545
+++ EM L +Y +L G ++ A L +M + TY TL++
Sbjct: 355 VINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDG 414
Query: 546 -CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDK 604
C + +F EA+ V+ +L ++ P Y+ +I C ++D+
Sbjct: 415 LCRDGQFL----------------EASQVMEEMLIKSHFPGVETYHMMIKGLC---DMDR 455
Query: 605 AYNMYM---EMV 613
Y M EMV
Sbjct: 456 RYEAVMWLEEMV 467
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 120/278 (43%), Gaps = 6/278 (2%)
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGM--AVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
V +N+LL A+C ++ + EA I + P+V + N ++ G + E E
Sbjct: 176 VDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHE 235
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTY 211
M +G P+SVTY I K N A+ L++ M + + T+LIH
Sbjct: 236 MVKRGFKPNSVTYGIRIDGFCKKRNFG-EALRLFEDMDRLDFDITVQILTTLIHGSGVAR 294
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
N KA ++F E+ G P YN L+ + V A+ + + M ++G+ PD+V +
Sbjct: 295 NKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFH 354
Query: 272 TLITFFCKYGE--LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
++ K E E +M ER ++P T L+ C ++ DL++ ML
Sbjct: 355 SMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYML 414
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
G P +A L A C + AF + + +G
Sbjct: 415 EKGYCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 142/368 (38%), Gaps = 68/368 (18%)
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS------EAF-----DLFREMLGG 331
++A+ + AE+ R PN ++ + LC + EAF ++FR+ G
Sbjct: 119 FDQAWALMAEV--RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFG- 175
Query: 332 GLSPREYAYFN-LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
FN L+ A+C E +A + + F+P + T N L+ G
Sbjct: 176 ------VDEFNILLRAFCTEREMKEA---------RSIFEKLHSRFNPDVKTMNILLLGF 220
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGV 450
G V M + P+ V+Y I I GFCK G+A L +MD +
Sbjct: 221 KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDF--DI 278
Query: 451 DLAVFSSLMKG------------LSDEVN----------YNSVINAYCAEGEVSKALILH 488
+ + ++L+ G L DE++ YN+++++ G+VS A+ +
Sbjct: 279 TVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVM 338
Query: 489 DEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSN 548
EME G SV + +F G K++ G F +C Y + E
Sbjct: 339 KEMEEKGIEPDSVTFHSMFIGM-MKSKEFG--------FNGVCE-----YYQKMKERSLV 384
Query: 549 NEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNM 608
+ ++V L K F G N + +L+ Y P G L C RR + A+
Sbjct: 385 PKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFEC 444
Query: 609 YMEMVHYG 616
+ V G
Sbjct: 445 SWQTVERG 452
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 9/307 (2%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM--AVEPNVV 128
C Q ++ +V F A +N LL C++K + +A + + +P++
Sbjct: 158 CSVRQTVESFWKFKRLVPDFF--DTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQ 215
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
+FN ++ G + +EAE +EM KGL PD VTYN+LI K+ + +A L D+
Sbjct: 216 TFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDRE-IEKAYKLIDK 271
Query: 189 MKQQRIPVPWTTYTSLIHLL-CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
M+++ TYT++I L DKA +V EM G P + YN I +C R
Sbjct: 272 MREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARR 331
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
+ DA + M +GL+P+A N +L +++E+ M+ LPN +
Sbjct: 332 LGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMF 391
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
LI ++ A L+ +M+ G L+ C + + +A EM+ KG
Sbjct: 392 LIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKG 451
Query: 368 FLPDFVT 374
P V+
Sbjct: 452 HRPSNVS 458
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 19/292 (6%)
Query: 90 GFLPSVATYNVLLHAYCRDKRVDEAMGIL-RGMAVEPNVVSFNTV------IDGLCAKRR 142
GF S + + +L+ R+++ D+ +L + +++S T+ + LC+ R+
Sbjct: 103 GFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQ 162
Query: 143 IKEAEELLQEMNSKGLAPD---SVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWT 199
E+ K L PD + +N L+ + + ++ A +Y +K Q P
Sbjct: 163 TVESF-----WKFKRLVPDFFDTACFNALLRTLCQEKSMT-DARNVYHSLKHQFQP---D 213
Query: 200 TYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
T I L + ++A F EM G +P +VTYN LI YC ++ A + M
Sbjct: 214 LQTFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMR 273
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
+ TPD + T+I G+ +KA E+ EM E G P+ Y+ I C RRL
Sbjct: 274 EEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLG 333
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
+A L EM+ GLSP Y L + +++ L M+ LP+
Sbjct: 334 DADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPN 385
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 117/230 (50%), Gaps = 11/230 (4%)
Query: 86 MVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFNTVIDGLCAKRR 142
M G P V TYN L+ YC+D+ +++A ++ M E P+V+++ TVI GL +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 143 IKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR---AIALYDQMKQQRIPVPWT 199
+A E+L+EM G PD YN I +N + R A L D+M ++ + T
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAI----RNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 200 TYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
TY +L N + ++++++ M+ + P+ + LI + ++V AM ++ M
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
+G +++ + L+ C ++E+A + EMVE+G P+ ++ ++
Sbjct: 413 VVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 211/512 (41%), Gaps = 59/512 (11%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV 123
SLIH+LC D A V E+ SG P +TY +L+ C+ R+D+AM I M
Sbjct: 294 SLIHVLCLFGKAKD-ALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQY 352
Query: 124 E---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
P+ + +N ++DG R++ EA +L ++M +G+ TYN LI + +N
Sbjct: 353 NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR-AE 411
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELI 239
L+ +K++ V T++ + LC ++ A K+ EM GF LVT + L+
Sbjct: 412 AGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN-----TLITFFCKYGELEKAFEMRAEMV 294
+ + R + + + + L P+ + N +L K + F + +
Sbjct: 472 IGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFL 531
Query: 295 E--------------RGILPNAD---TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
+ + P D + S +D L QR ++ LF G + +
Sbjct: 532 DIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQR--NQPKPLFGLARGQRVEAKP 589
Query: 338 YAY-----FNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
++ + Y G+ S A L + I G +T + TYN+++
Sbjct: 590 DSFDVDMMNTFLSIYLSKGDLSLACKLFE--IFNGMGVTDLTSY-----TYNSMMSSFVK 642
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
G + A G+L M E + D +YN++I G K+G A ++ + + GG
Sbjct: 643 KGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYL---- 698
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDK 512
D V YN++INA + +A L D M+ +G V Y + + K
Sbjct: 699 -----------DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 513 KARTRGAKESLLRMFYDLCTSLPTFTYDTLIE 544
+ + A + L M C LP DT+++
Sbjct: 748 AGKLKEAYKYLKAMLDAGC--LPNHVTDTILD 777
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 177/418 (42%), Gaps = 42/418 (10%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR-----GMAVEPNVVSFNTVIDG 136
+L M G +LL + R + + A+G+L G + P+V +++V+
Sbjct: 114 LLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSV--YDSVLIA 171
Query: 137 LCAKRRIKEAEELLQEM---------NSKGLA------PDSVTYNTLITAMSKNTNLVIR 181
L K ++ A +L ++ + G P +V N L+ + + ++
Sbjct: 172 LVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGL-RRADMRSE 230
Query: 182 AIALYDQMK-QQRIPVPWTTYTSLIHLL-CTYNVDKAYKVFTEM------IASGFEPSLV 233
+++++K +R +Y IH C ++D A +F EM S F P +
Sbjct: 231 FKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDIC 290
Query: 234 TYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM 293
TYN LIH C + +DA+ ++ + G PD LI CK ++ A + EM
Sbjct: 291 TYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM 350
Query: 294 VERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEF 353
G +P+ Y+ L+D R+++EA LF +M+ G+ + Y L+ G
Sbjct: 351 QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRA 410
Query: 354 SKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP 413
F L ++ KG FV + S+V C G++E A+ ++ M S
Sbjct: 411 EAGFTLFCDLKKKG---QFVDAITFSIVGLQL-----CREGKLEGAVKLVEEMETRGFSV 462
Query: 414 DDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGV---DLAVFSSLMKGLSDEVNY 468
D V+ + ++ GF K G +LM + E + V + V +SL + S + +Y
Sbjct: 463 DLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDY 520
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 172/448 (38%), Gaps = 58/448 (12%)
Query: 90 GFLPSVATYNVLLHAYCRDK---RVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEA 146
G+ S Y+ + CR V + +G ++ V + ++D L + + A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 147 EELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
+L M G + Y++++ A+ K L + L+ L+
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILF----------------KLLE 190
Query: 207 LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF---RGMPDRGL 263
++ D +V I + P V NEL+ D + +F +GM +
Sbjct: 191 ASDNHSDDDTGRV----IIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGM--KRF 244
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL------PNADTYSKLIDCLCPQRR 317
D N I F +G+L+ A + EM ER + P+ TY+ LI LC +
Sbjct: 245 KFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGK 304
Query: 318 LSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
+A ++ E+ G P Y L+ C A + EM + GF+PD
Sbjct: 305 AKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPD------ 358
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
+ YN L+ G +V EA + M + + +YNI+I G + G F L
Sbjct: 359 --TIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTL 416
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
++ + G VD FS + GL C EG++ A+ L +EME G
Sbjct: 417 FCDLKKKGQF--VDAITFS--IVGLQ-----------LCREGKLEGAVKLVEEMETRGFS 461
Query: 498 RASVLYIMLFDGFDKKARTRGAKESLLR 525
V L GF K+ R KE L++
Sbjct: 462 VDLVTISSLLIGFHKQGRW-DWKEKLMK 488
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 164/449 (36%), Gaps = 73/449 (16%)
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G++ S Y+++ C + + + M + G+ D + L+ + G+ E A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ M E G N Y ++ L + L A + ++L +
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDN------------ 194
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYG---NCLLGRVEEALGIL 403
H D+ + + P V N L+ G + + L
Sbjct: 195 -----------HSDDDTGRV-----IIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKL 238
Query: 404 RGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS 463
+GM D SYNI I GF G+L A L EM E + G
Sbjct: 239 KGMKRFKF--DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFG---------P 287
Query: 464 DEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESL 523
D YNS+I+ C G+ ALI+ DE++ G + Y +L G K R A
Sbjct: 288 DICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIY 347
Query: 524 LRMFYDLCTSLPTFTYDTLIENC---SNNEFKSVVELAKGF------GMR---------- 564
M Y+ F DT++ NC + + V E + F G+R
Sbjct: 348 GEMQYN------GFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILI 401
Query: 565 -GL----KNEAASVLNTVLQWNYK-PDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFA 618
GL + EA L L+ + D ++ + ++ CR ++ A + EM GF+
Sbjct: 402 DGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFS 461
Query: 619 SHMFSVLALIKALFHVGRHNEVRRVIQNV 647
+ ++ +L+ GR + ++++++
Sbjct: 462 VDLVTISSLLIGFHKQGRWDWKEKLMKHI 490
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 43/213 (20%)
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
TYN ++ ++ + A G+L M ++ ++N +I GL R A +L +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV 213
+G D V YNTLI A+ K T L
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRL----------------------------------- 716
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
D+A ++F M ++G P +V+YN +I ++++A + M D G P+ V +T+
Sbjct: 717 DEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTI 775
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+ + K E+EKA +A V PN + S
Sbjct: 776 LDYLGK--EMEKARFKKASFVRNK--PNNNNIS 804
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D A VL + G + YN L++A + R+DEA + M + P+VVS+NT+
Sbjct: 682 DLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTM 741
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK 174
I+ ++KEA + L+ M G P+ VT +T++ + K
Sbjct: 742 IEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 135/320 (42%), Gaps = 44/320 (13%)
Query: 127 VVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALY 186
+ +N + L R+ + EE+ EM G+ D++TY+T+IT +K NL
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC-AKRCNL-------- 236
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
YN KA + F M +G P VTY+ ++ Y
Sbjct: 237 ------------------------YN--KAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
+V++ + ++ G PDA+ + L F + G+ + + EM + PN Y+
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
L++ + + A LF EML GL+P E LV Y A L +EM K
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAE-MSLSPDDVSYNIVISGF 425
+ DF + YN L+ +G EEA + M E + PD+ SY +++ +
Sbjct: 391 KWPMDF--------ILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIY 442
Query: 426 CKLGELGKAFELMVEMDEAG 445
G+ KA EL EM +AG
Sbjct: 443 GSGGKAEKAMELFEEMLKAG 462
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 134/291 (46%), Gaps = 8/291 (2%)
Query: 52 EMNRKGLDPARESLIHLLCCDQLQN--DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
EM + G++ + ++ C + N + A + M +G +P TY+ +L Y +
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 110 RVDEAMGIL-RGMAV--EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
+V+E + + R +A +P+ ++F+ + +LQEM S + P+ V YN
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDK-AYKVFTEMIA 225
TL+ AM + + A +L+++M + + T T+L+ + + A +++ EM A
Sbjct: 331 TLLEAMGRAGKPGL-ARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR-GLTPDAVICNTLITFFCKYGELE 284
+ + YN L++ ++A +F M + PD ++ + G+ E
Sbjct: 390 KKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAE 449
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSP 335
KA E+ EM++ G+ N + L+ CL +R+ + +F + G+ P
Sbjct: 450 KAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKP 500
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 114/283 (40%), Gaps = 40/283 (14%)
Query: 222 EMIASGFEPSLVTYNELIHAYCCRDRVQ---DAMGIFRGMPDRGLTPDAVICNTLITFFC 278
EM+ G E +TY+ +I C R A+ F M GL PD V + ++ +
Sbjct: 211 EMVKDGVELDNITYSTII---TCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYS 267
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFD------LFREMLGGG 332
K G++E+ + V G P+A +S L + EA D + +EM
Sbjct: 268 KSGKVEEVLSLYERAVATGWKPDAIAFSVL------GKMFGEAGDYDGIRYVLQEMKSMD 321
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
+ P Y L+ A G+ A L +EM+ G P+ T +T IYG
Sbjct: 322 VKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKT------LTALVKIYGKAR 375
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
R +AL + M D + YN +++ +G +A L +M E+ R
Sbjct: 376 WAR--DALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCR---- 429
Query: 453 AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
D +Y +++N Y + G+ KA+ L +EM G
Sbjct: 430 ----------PDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
D VL EM + P+V YN LL A R + A + M + PN + +
Sbjct: 308 DGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTAL 367
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ R ++A +L +EM +K D + YNTL+ M + L A L++ MK+
Sbjct: 368 VKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADIGLEEEAERLFNDMKESV 426
Query: 194 IPVPWT-TYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
P +YT+++++ + +KA ++F EM+ +G + +++ L+ R+ D
Sbjct: 427 QCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDV 486
Query: 252 MGIFRGMPDRGLTPDAVICNTLIT 275
+ +F RG+ PD +C L++
Sbjct: 487 VYVFDLSIKRGVKPDDRLCGCLLS 510
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 150/350 (42%), Gaps = 35/350 (10%)
Query: 79 AYKVLSEMV-NSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNV---VSFNTVI 134
++ +++ M+ N+ +P+ T+ ++ Y V EA+ + + N+ SF ++
Sbjct: 100 SWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLD-DFNLRDETSFYNLV 158
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA---------- 184
D LC + + EAEEL N G N + +K NL++R +
Sbjct: 159 DALCEHKHVVEAEELCFGKNVIG--------NGFSVSNTKIHNLILRGWSKLGWWGKCKE 210
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYNVD-KAYKVFTEMIASGFEPSLVTYNELIHAYC 243
+ +M + + +Y+ + ++C KA K++ EM + + +V YN +I A
Sbjct: 211 YWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIG 270
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
V+ + +FR M +RG P+ NT+I C+ G + A+ M EM +RG P++
Sbjct: 271 ASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSI 330
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
TY L L + SE LF M+ G+ P+ Y L+ + G ++ M
Sbjct: 331 TYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTM 387
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP 413
G PD YNA+I G ++ A M E LSP
Sbjct: 388 KESGDTPD--------SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 53/284 (18%)
Query: 98 YNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSF-NTVIDGLCAKRRIK-----EAEELLQ 151
YN L+ A C K V EA + G V N S NT I L + K + +E +
Sbjct: 155 YN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWK 213
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL-CT 210
+M+++G+ D +Y+ + M K+ +A+ LY +MK +R+ + Y ++I + +
Sbjct: 214 KMDTEGVTKDLFSYSIYMDIMCKSGK-PWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGAS 272
Query: 211 YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVIC 270
V+ +VF EM G EP++ T+N +I C R++DA + MP RG PD+
Sbjct: 273 QGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS--- 329
Query: 271 NTLITFFCKYGELEKAFEMRA---EMVERGILPNADTY---------------------- 305
IT+ C + LEK E+ + M+ G+ P DTY
Sbjct: 330 ---ITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKT 386
Query: 306 -------------SKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
+ +ID L + L A + EM+ GLSPR
Sbjct: 387 MKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPR 430
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 124/323 (38%), Gaps = 45/323 (13%)
Query: 299 LPNADTYSKLIDCLCPQRRLSEAFDLF--REMLGGGLSPREYAYFNLV-GAYCLVGEFSK 355
L + ++ L+D LC + + EA +L + ++G G S NL+ + +G + K
Sbjct: 148 LRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGK 207
Query: 356 AFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDD 415
+M +G D L +Y+ + C G+ +A+ + + M + D
Sbjct: 208 CKEYWKKMDTEGVTKD--------LFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDV 259
Query: 416 VSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAY 475
V+YN VI + + EM E RG + V +N++I
Sbjct: 260 VAYNTVIRAIGASQGVEFGIRVFREMRE----RGCEPNV-----------ATHNTIIKLL 304
Query: 476 CAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLP 535
C +G + A + DEM G S+ Y+ LF +K + +L +F
Sbjct: 305 CEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS-------EILSLF-------- 349
Query: 536 TFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVE 595
+I + + + V L + F G V T+ + PD A YN +I
Sbjct: 350 ----GRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDA 405
Query: 596 HCRRRNVDKAYNMYMEMVHYGFA 618
++ +D A EM+ G +
Sbjct: 406 LIQKGMLDMAREYEEEMIERGLS 428
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 25/244 (10%)
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
I N ++ + K G K E +M G+ + +YS +D +C + +A L++EM
Sbjct: 191 IHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEM 250
Query: 329 LGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIY 388
+ AY ++ A + EM +G P++ T+N +I
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGC--------EPNVATHNTIIK 302
Query: 389 GNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV------EMD 442
C GR+ +A +L M + PD ++Y + S K E+ F M+ +MD
Sbjct: 303 LLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMD 362
Query: 443 ---------EAGGIRGVDLAVFSSLMKG--LSDEVNYNSVINAYCAEGEVSKALILHDEM 491
E G L V+ ++ + D YN+VI+A +G + A +EM
Sbjct: 363 TYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM 422
Query: 492 EHHG 495
G
Sbjct: 423 IERG 426
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 175/385 (45%), Gaps = 25/385 (6%)
Query: 70 CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR-----GMAVE 124
C Q A++ ++N P+++T+N+L+ + ++ A G+LR GM +
Sbjct: 446 CKKQRAVKEAFRFTKLILN----PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTAD 501
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
+ + T+I ++ E+ +M++ G+ + T+ LI ++ V +A
Sbjct: 502 CKL--YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCAR-AGQVAKAFG 558
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYN--VDKAYKVFTEMIASG--FEPSLVTYNELIH 240
Y ++ + + + +LI C + VD+A+ V EM A +P ++ L+
Sbjct: 559 AYGILRSKNVKPDRVVFNALISA-CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMK 617
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
A C +V+ A +++ + G+ + + K G+ + A + +M E+ + P
Sbjct: 618 ACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTP 677
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
+ +S LID + L EAF + ++ G+ +Y +L+GA C ++ KA L
Sbjct: 678 DEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELY 737
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
+++ + P++ T NALI C ++ +A+ L + + L P+ ++Y++
Sbjct: 738 EKIKS--------IKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSM 789
Query: 421 VISGFCKLGELGKAFELMVEMDEAG 445
++ + + +F+L+ + G
Sbjct: 790 LMLASERKDDFEVSFKLLSQAKGDG 814
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 9/313 (2%)
Query: 69 LCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEP 125
+C + A VL + SG Y L+ + + +VD + M+ VE
Sbjct: 476 VCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEA 535
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
N+ +F +IDG ++ +A + SK + PD V +N LI+A + + V RA +
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ-SGAVDRAFDV 594
Query: 186 YDQMKQQRIPVP--WTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAY 242
+MK + P+ + +L+ C V++A +V+ + G + Y +++
Sbjct: 595 LAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNS- 653
Query: 243 CCRDRVQD-AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
C + D A I++ M ++ +TPD V + LI L++AF + + +GI
Sbjct: 654 CSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLG 713
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
+YS L+ C + +A +L+ ++ L P L+ A C + KA D
Sbjct: 714 TISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLD 773
Query: 362 EMIHKGFLPDFVT 374
E+ G P+ +T
Sbjct: 774 EIKTLGLKPNTIT 786
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 173/419 (41%), Gaps = 62/419 (14%)
Query: 98 YNVLLHAYCRDKR-VDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
Y+ C+ +R V EA + + + P + +FN ++ + + I+ A +L+ +
Sbjct: 438 YHASFFKACKKQRAVKEAFRFTK-LILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQES 496
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKA 216
G+ D Y TLI++ +K+ VD
Sbjct: 497 GMTADCKLYTTLISSCAKSGK-----------------------------------VDAM 521
Query: 217 YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
++VF +M SG E +L T+ LI +V A G + + + + PD V+ N LI+
Sbjct: 522 FEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA 581
Query: 277 FCKYGELEKAFEMRAEMVERG--ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLS 334
+ G +++AF++ AEM I P+ + L+ C ++ A ++++ + G+
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR 641
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
Y V + G++ A + +M K PD V ++ALI
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPD--------EVFFSALIDVAGHAK 693
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAV 454
++EA GIL+ + +SY+ ++ C + KA EL + I+ + L
Sbjct: 694 MLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK------IKSIKLRP 747
Query: 455 FSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKK 513
S M N++I A C ++ KA+ DE++ G ++ Y ML ++K
Sbjct: 748 TISTM---------NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERK 797
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 134/310 (43%), Gaps = 7/310 (2%)
Query: 70 CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMG---ILRGMAVEPN 126
C + D ++V +M NSG ++ T+ L+ R +V +A G ILR V+P+
Sbjct: 512 CAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPD 571
Query: 127 VVSFNTVIDGLCAKRRIKEAEELLQEMNSKG--LAPDSVTYNTLITAMSKNTNLVIRAIA 184
V FN +I + A ++L EM ++ + PD ++ L+ A N V RA
Sbjct: 572 RVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC-NAGQVERAKE 630
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
+Y + + I YT ++ + + D A ++ +M P V ++ LI
Sbjct: 631 VYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAG 690
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
+ +A GI + +G+ + ++L+ C + +KA E+ ++ + P
Sbjct: 691 HAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTIS 750
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
T + LI LC +L +A + E+ GL P Y L+ A +F +F L +
Sbjct: 751 TMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQA 810
Query: 364 IHKGFLPDFV 373
G P+ +
Sbjct: 811 KGDGVSPNLI 820
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 166/366 (45%), Gaps = 42/366 (11%)
Query: 40 SGGLLKTTTTVSEMNRKG--LDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSV 95
SG + + ++EM + +DP S+ L+ CC+ Q + A +V + G +
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
Y + +++ + D A I + M V P+ V F+ +ID + + EA +LQ+
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN 212
S+G+ +++Y++L+ A N +A+ LY+++K ++ +T +LI LC N
Sbjct: 705 AKSQGIRLGTISYSSLMGACC-NAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGN 763
Query: 213 -VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
+ KA + E+ G +P+ +TY+ L+ A +D + + + G++P+ ++C
Sbjct: 764 QLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCR 823
Query: 272 TLITFFCK-------------------YGELEKAFEMRAEMVER-----GILPNADTYSK 307
IT CK ++E + A MV R G +P + S+
Sbjct: 824 -CITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPTTEVVSQ 882
Query: 308 LIDCLCPQRRLSEAF-DLFREMLGGGLSP-REYAYFNLVGAYCLVGEFS-KAFHLRDEMI 364
++ CL Q A D LG +S +++ F LV + GE+ +AF L +E
Sbjct: 883 VLGCL--QLPHDAALRDRLISTLGINISSQKQHNIFPLVDGF---GEYDPRAFSLLEEAT 937
Query: 365 HKGFLP 370
G LP
Sbjct: 938 SLGVLP 943
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 156/363 (42%), Gaps = 40/363 (11%)
Query: 154 NSKGLAPD-SVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN 212
NS G +P+ S YN L+ + I+L + + Q+ + Y + C
Sbjct: 395 NSNGRSPETSDAYNRLL-----RDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQ 449
Query: 213 --VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVIC 270
V +A++ FT++I P++ T+N L+ ++ A G+ R + + G+T D +
Sbjct: 450 RAVKEAFR-FTKLI---LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLY 505
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
TLI+ K G+++ FE+ +M G+ N T+ LID ++++AF + +
Sbjct: 506 TTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRS 565
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
+ P + L+ A G +AF + EM + D P ++ AL+
Sbjct: 566 KNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPID------PDHISIGALMKAC 619
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE------- 443
C G+VE A + + + + + Y I ++ K G+ A + +M E
Sbjct: 620 CNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDE 679
Query: 444 ---------AGGIRGVDLAVFSSLMKGLSD-----EVNYNSVINAYCAEGEVSKALILHD 489
AG + +D A F L S ++Y+S++ A C + KAL L++
Sbjct: 680 VFFSALIDVAGHAKMLDEA-FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYE 738
Query: 490 EME 492
+++
Sbjct: 739 KIK 741
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 163/373 (43%), Gaps = 35/373 (9%)
Query: 89 SGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM----AVEPNVVSFNTVIDGLCAKRRIK 144
S +P+V +YN +++A+C + VDEA+ + R + P+ V++ + GL RI
Sbjct: 210 SNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIG 269
Query: 145 EAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSL 204
+A LL+EM SKG A DS YN LI + +A+ +D++K + T Y +
Sbjct: 270 DAASLLREMLSKGQAADSTVYNNLIRGY-LDLGDFDKAVEFFDELKSKC-----TVYDGI 323
Query: 205 I------HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
+ + N +A + + ++ F T N L+ + + +A +F M
Sbjct: 324 VNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEM 383
Query: 259 PDRGLTPDAVICNT-----LITFFCKYGELEKAF----EMRAEMVERGILPNADTYSKLI 309
D P+ + N+ ++ K GE +A ++ +++ + + + Y ++
Sbjct: 384 LDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIV 443
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
C Q L+EA F E + L ++ ++ AY A + D M+
Sbjct: 444 TRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLR 503
Query: 370 PDFVTEFSPSLVTYNALIYGNCLL-GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKL 428
V +F A ++G + G++ E+ +L M E PD Y++V+ G C
Sbjct: 504 --VVADFG-------ARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDG 554
Query: 429 GELGKAFELMVEM 441
L +A +++ EM
Sbjct: 555 DALDQAKDIVGEM 567
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 194/480 (40%), Gaps = 67/480 (13%)
Query: 207 LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM-PDRGLTP 265
L+ ++D A K+ + + S P++ T N +I A R +++ +F+ + P
Sbjct: 155 LIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVP 214
Query: 266 DAVICNTLITFFCKYGELEKAFEM-RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
+ V N +I C G +++A E+ R + P++ TY L L R+ +A L
Sbjct: 215 NVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASL 274
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM-----IHKGFLPDFVTEF--- 376
REML G + Y NL+ Y +G+F KA DE+ ++ G + E+
Sbjct: 275 LREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFE 334
Query: 377 ----SPSLVTYNALI---------YGNCLL------GRVEEALGILRGMAEMSLSPDDVS 417
++ +Y +L+ GN LL G+ +EA + M + P+ +S
Sbjct: 335 KGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILS 394
Query: 418 YN-----IVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVI 472
N I+++ K+GE +A + V V S + D + Y +++
Sbjct: 395 VNSDTVGIMVNECFKMGEFSEAINT---------FKKVGSKVTSKPF--VMDYLGYCNIV 443
Query: 473 NAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMF---YD 529
+C +G +++A E + + + D + K R A + L RM
Sbjct: 444 TRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLR 503
Query: 530 LCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVY 589
+ + LI+N G E+A VL + + KPD ++Y
Sbjct: 504 VVADFGARVFGELIKN-------------------GKLTESAEVLTKMGEREPKPDPSIY 544
Query: 590 NFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLR 649
+ ++ C +D+A ++ EM+ + +I+ GR E+ +++ +V R
Sbjct: 545 DVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNSVAR 604
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 151/349 (43%), Gaps = 17/349 (4%)
Query: 100 VLLHAYCRDKRVDEAMGIL---RGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
++LH+ C+ R +A IL R + +P+ +++ + + + E + +L++
Sbjct: 228 LILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL 287
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKA 216
G+AP S Y I + L A + + + + P+ +LI + + D A
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLT-EAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSA 346
Query: 217 YKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
+ M+++G P++ T ++L C D+ + + + +G + + +I+F
Sbjct: 347 VEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISF 406
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
CK G + +++ EM + G+ P+ Y+ LI+ C + A L+ EM G
Sbjct: 407 LCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMN 466
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
Y L+ GE ++ L D+M+ +G PD Y +LI G C ++
Sbjct: 467 LTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPD--------ETIYMSLIEGLCKETKI 518
Query: 397 EEALGILRGMAEMSLSPDDVSYNIV---ISGFCKLGELGKAFELMVEMD 442
E A+ + R M V+ ++ + C G G+A +L+ E +
Sbjct: 519 EAAMEVFRKC--MERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRERE 565
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 9/247 (3%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVD---EAMGILRGMAVEPNVVSFNTV 133
D+A + L MV++G LP++ T + L CR + D +A +L + S++ +
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I LC R++E+ LQEM +GLAPD YN LI A K ++ A L+D+M +
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK-AEMIRPAKKLWDEMFVEG 462
Query: 194 IPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ TTY LI L +++ ++F +M+ G EP Y LI C +++ AM
Sbjct: 463 CKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM 522
Query: 253 GIFRGMPDRG-LTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+FR +R T + + + C G +A ++ + ER L + + L+ C
Sbjct: 523 EVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQL---LREREHLEHTGAHVVLLKC 579
Query: 312 LCPQRRL 318
+ + +
Sbjct: 580 VADAKEV 586
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 182/450 (40%), Gaps = 40/450 (8%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR-----GMAVEPNVVSFNTVIDG 136
+ ++ ++ L + Y L+ ++ A +L G + P+V N ++ G
Sbjct: 104 LFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVC--NRLLAG 161
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM--SKNTNLVIRAIALYDQMKQQRI 194
L + A++L +M KG++ +++ + I S TN ++R L D++K+ +
Sbjct: 162 LTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLR---LVDEVKKANL 218
Query: 195 PVPWTTYTSLI-HLLCTYNVD-KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ + LI H LC + + A+ + E+ +P + Y + A+ + +
Sbjct: 219 NINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQ 278
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP-NADTYSKLIDC 311
+ + G+ P + I L +A E+ AE++ G P + D LI
Sbjct: 279 VVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEV-AEVIVSGKFPMDNDILDALIGS 337
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
+ S A + M+ G P L C + + + KG+ +
Sbjct: 338 VSAVDPDS-AVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSE 396
Query: 372 FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL 431
L +Y+ +I C GRV E+ L+ M + L+PD YN +I CK +
Sbjct: 397 --------LQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMI 448
Query: 432 GKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
A +L EM G ++L ++ L++ LS+E GE ++L L D+M
Sbjct: 449 RPAKKLWDEMFVEGC--KMNLTTYNVLIRKLSEE-------------GEAEESLRLFDKM 493
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKE 521
G +Y+ L +G K+ + A E
Sbjct: 494 LERGIEPDETIYMSLIEGLCKETKIEAAME 523
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 108/501 (21%), Positives = 184/501 (36%), Gaps = 61/501 (12%)
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDK 215
G + DS++Y+++ ++S + AL+ Q+K +I + + Y SLI L+
Sbjct: 77 GYSHDSISYHSIFKSLSLSRQFSAMD-ALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQS 135
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
A+ V E ++G E N L+ A +F M +G++ + + I
Sbjct: 136 AFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIG 195
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLI-DCLCPQRRLSEAFDLFREMLGGGLS 334
+FC+ E + + E+ + + N + LI LC R +AF + E+
Sbjct: 196 WFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCK 255
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
P AY + A+ + G + R ++ K +P Y A I
Sbjct: 256 PDFMAYRVIAEAFVVTGNLYE----RQVVLKK----KRKLGVAPRSSDYRAFILDLISAK 307
Query: 395 RVEEALGILRGMAEMSLS---PDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
R+ EA + +AE+ +S P D + G + A E +V M G + +
Sbjct: 308 RLTEA----KEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAI- 362
Query: 452 LAVFSSLMKGLSDEVNYNSVINAY----------------------CAEGEVSKALILHD 489
S L K L + +I AY C G V ++
Sbjct: 363 -RTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQ 421
Query: 490 EMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNN 549
EM+ G LY L + K R AK+ MF + C + TY+ LI S
Sbjct: 422 EMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC-KMNLTTYNVLIRKLSEE 480
Query: 550 EFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMY 609
G E+ + + +L+ +PD +Y LI C+ ++ A ++
Sbjct: 481 ---------------GEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
Query: 610 ---MEMVHYGFASHMFSVLAL 627
ME H + S L
Sbjct: 526 RKCMERDHKTVTRRVLSEFVL 546
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV 123
SL+ C + +Y L EM G P V+ YN L+ A C+ + + A + M V
Sbjct: 401 SLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFV 460
Query: 124 EP---NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL 178
E N+ ++N +I L + +E+ L +M +G+ PD Y +LI + K T +
Sbjct: 461 EGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 195 PVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTYNELIHAYCC-RDRVQDAM 252
P+ +T LI + + +K F +M+ F P N ++ R +Q A
Sbjct: 116 PLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAF 175
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+F+ G+ P+ N L+ FC +L A+++ +M+ER ++P+ D+Y LI
Sbjct: 176 ELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDF 372
C + +++ A +L +ML G P L+G C G F + +EMI KGF P F
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 291
Query: 373 VTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELG 432
N L+ G C G+VEEA ++ + + + ++ +VI C E
Sbjct: 292 SVS--------NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESE 343
Query: 433 KA---FELMVEMDEAGGIRGVDLAV 454
K E V+ + G R VD+ +
Sbjct: 344 KIKLFLEDAVKEEITGDTRIVDVGI 368
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 13/217 (5%)
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
V + +SG+ + + LI Y + + F M + TP N ++
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 279 KY-GELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE 337
+ G L+KAFE+ G++PN +Y+ L+ C LS A+ LF +ML + P
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 338 YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVE 397
+Y L+ +C G+ + A L D+M++KGF+PD LI G C G +
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD------------RTLIGGLCDQGMFD 273
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
E L M SP N ++ GFC G++ +A
Sbjct: 274 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 11/251 (4%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLC 138
VL++ +SG+ + + L+ Y K ++ + M P N ++D L
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 139 AKR-RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
+ R +++A EL + G+ P++ +YN L+ A N +L I A L+ +M ++ +
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI-AYQLFGKMLERDVVPD 224
Query: 198 WTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR 256
+Y LI C V+ A ++ +M+ GF P LI C + +
Sbjct: 225 VDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLE 280
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
M +G +P + N L+ FC +G++E+A ++ +++ G ++DT+ +I +C +
Sbjct: 281 EMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNED 340
Query: 317 RLSEAFDLFRE 327
SE LF E
Sbjct: 341 E-SEKIKLFLE 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLC 138
AY++ +M+ +P V +Y +L+ +CR +V+ AM +L M + V T+I GLC
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM-LNKGFVPDRTLIGGLC 267
Query: 139 AKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW 198
+ E ++ L+EM SKG +P N L+ + V A + + + + +
Sbjct: 268 DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC-SFGKVEEACDVVEVVMKNGETLHS 326
Query: 199 TTYTSLIHLLCTYNVDKAYKVFTE 222
T+ +I L+C + + K+F E
Sbjct: 327 DTWEMVIPLICNEDESEKIKLFLE 350
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 179/440 (40%), Gaps = 53/440 (12%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDG 136
D A +V + M + GF+P+ N+++ + V+ A+ I G+ N SF+ +
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR-NFFSFDIALSH 183
Query: 137 LCAKR---RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
C++ + + +L+ M +G P+ + ++ + T V A + M
Sbjct: 184 FCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCR-TGCVSEAFQVVGLMICSG 242
Query: 194 IPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
I V ++ L+ + KA +F +MI G P+LVTY LI + V +A
Sbjct: 243 ISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAF 302
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ + GL PD V+CN +I + + G E+A ++ + +R ++P+ T++ ++ L
Sbjct: 303 TVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSL 362
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG-AYCLVGEFSKAFHLRDEMIHKGFLPD 371
C LS FDL + G + + NL+ + +G S A + M +K F D
Sbjct: 363 C----LSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALD 418
Query: 372 FVTEF----------SPSLVT-----------------YNALIYGNCLLGRVEEALGILR 404
T +P ++A+I LG+ A+ + +
Sbjct: 419 CYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFK 478
Query: 405 GMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSD 464
D VSY + I G + + +A+ L +M E GGI +
Sbjct: 479 RCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKE-GGI--------------YPN 523
Query: 465 EVNYNSVINAYCAEGEVSKA 484
Y ++I+ C E E K
Sbjct: 524 RRTYRTIISGLCKEKETEKV 543
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 187/467 (40%), Gaps = 56/467 (11%)
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
DKA +V+T M + GF P+ N ++ + V A+ IF G+ R +
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFS----FDIA 180
Query: 274 ITFFCKYG---ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
++ FC G +L + M+ G PN + + +++ C +SEAF + M+
Sbjct: 181 LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMIC 240
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
G+S + LV + GE KA L ++MI G SP+LVTY +LI G
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGC--------SPNLVTYTSLIKGF 292
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGV 450
LG V+EA +L + L+PD V N++I + +LG +A ++ +++ +
Sbjct: 293 VDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVP-- 350
Query: 451 DLAVFSSLMKGLS-------------------DEVNYNSVINAYCAEGEVSKALILHDEM 491
D F+S++ L D V N + N + G S AL + M
Sbjct: 351 DQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIM 410
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEF 551
+ Y + + R A + + ++ L + +I+
Sbjct: 411 SYKDFALDCYTYTVYLSALCRGGAPRAAIK-MYKIIIKEKKHLDAHFHSAIID------- 462
Query: 552 KSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYME 611
S++EL K N A + + Y D Y I R + +++AY++ +
Sbjct: 463 -SLIELGK-------YNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCD 514
Query: 612 MVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFEL 658
M G + + +I L +VR+ +LR C G EL
Sbjct: 515 MKEGGIYPNRRTYRTIISGLCKEKETEKVRK----ILRECIQEGVEL 557
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 168/423 (39%), Gaps = 50/423 (11%)
Query: 97 TYNVLLHAYCRDKRVDEAMGI------LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELL 150
++++ L +C + +G+ + G PN F ++ C + EA +++
Sbjct: 176 SFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVV 235
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT 210
M G++ ++ L++ ++ +A+ L+++M Q TYTSLI
Sbjct: 236 GLMICSGISVSVNVWSMLVSGFFRSGEPQ-KAVDLFNKMIQIGCSPNLVTYTSLIKGFVD 294
Query: 211 YN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA-- 267
VD+A+ V +++ + G P +V N +IH Y R ++A +F + R L PD
Sbjct: 295 LGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYT 354
Query: 268 ------------------------------VICNTLITFFCKYGELEKAFEMRAEMVERG 297
V N L F K G A ++ + M +
Sbjct: 355 FASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKD 414
Query: 298 ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAF 357
+ TY+ + LC A +++ ++ + + ++ + +G+++ A
Sbjct: 415 FALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAV 474
Query: 358 HLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVS 417
HL I + + D +V+Y I G R+EEA + M E + P+ +
Sbjct: 475 HLFKRCILEKYPLD--------VVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRT 526
Query: 418 YNIVISGFCKLGELGKAFELMVEMDEAGG--IRGVDLAVFSSLMKGLSDEVNYNSVINAY 475
Y +ISG CK E K +++ E + G V+S L + D + SV +
Sbjct: 527 YRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSVFEKW 586
Query: 476 CAE 478
+E
Sbjct: 587 KSE 589
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 166/375 (44%), Gaps = 24/375 (6%)
Query: 88 NSGFLPSVATYNVLLHAYCRDKRVDEAMG----ILRGMAVEPNVVSFNTVIDGLCAKRRI 143
+G P++ TYN++ AY ++ + A+ + + P++ +F ++ GL + +
Sbjct: 158 QAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNL 217
Query: 144 KEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ--RIPVPWTTY 201
++A E+ ++M KG D V Y+ L+ KN++ + LY ++K++ Y
Sbjct: 218 EKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSD-ADGVLKLYQELKEKLGGFVDDGVVY 276
Query: 202 TSLIHLLCTYNVDK-AYKVFTEMIA--SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
L+ ++K A + + E + S S + YN ++ A + +A+ +F +
Sbjct: 277 GQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAV 336
Query: 259 -----PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLC 313
P R L + N ++ +C G+ E+A E+ +M + P+ +++ L++ LC
Sbjct: 337 KKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLC 396
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
L+EA L+ EM + P EY Y L+ G+ + M+
Sbjct: 397 DNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVE-------- 448
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
+ P+L YN L G++++A M L DD +Y ++ + G L +
Sbjct: 449 SNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVS-KLKMDDEAYKFIMRALSEAGRLDE 507
Query: 434 AFELMVEMDEAGGIR 448
+++ EM + +R
Sbjct: 508 MLKIVDEMLDDDTVR 522
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 176/417 (42%), Gaps = 69/417 (16%)
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQE---MNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
P + + NTV L A+ R + LLQ +N G+AP+ +TYN + A
Sbjct: 128 PTIFTVNTV---LAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQA---------- 174
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHA 241
Y +++ I +L H YK+F + + PS+ T+ L+
Sbjct: 175 ----YLDVRKPEI--------ALEH----------YKLFID--NAPLNPSIATFRILVKG 210
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER--GIL 299
D ++ AM I M +G D V+ + L+ K + + ++ E+ E+ G +
Sbjct: 211 LVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFV 270
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR--EYAYFNLVGAYCLVGEFSKAF 357
+ Y +L+ + EA + + E +G R AY ++ A G+F +A
Sbjct: 271 DDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEAL 330
Query: 358 HLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVS 417
L D + + P + +L T+N ++ G C G+ EEA+ + R M + SPD +S
Sbjct: 331 KLFDAVKKEHNPP---RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLS 387
Query: 418 YNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCA 477
+N +++ C L +A +L EM+E + V DE Y +++
Sbjct: 388 FNNLMNQLCDNELLAEAEKLYGEMEE----KNVK-----------PDEYTYGLLMDTCFK 432
Query: 478 EGEVSKALILHDEMEHHGSLRASV-LYIMLFDGFDKKARTRGAKESLLRMFYDLCTS 533
EG++ + + M +LR ++ +Y L D K + AK F+D+ S
Sbjct: 433 EGKIDEGAAYYKTM-VESNLRPNLAVYNRLQDQLIKAGKLDDAKS-----FFDMMVS 483
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 183/428 (42%), Gaps = 58/428 (13%)
Query: 51 SEMNRKGLDPARESLIHLLCCDQ-LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
SEM + G+ P + + LL L + + S ++ G +V L+ Y +
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273
Query: 110 RVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLI 169
++++A+ +L E +V + +V+ G R KEA EM S GL P++ TY+ ++
Sbjct: 274 KMEDAVRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 170 TAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSL------IHLLCTYNVDKAYKVFTEM 223
+ S +R++ Q+ Q I V + T + +++ C+ + +A +VF M
Sbjct: 333 SLCS-----AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 224 IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGEL 283
++ P++V++ LI VQD G+ M R + P+ V + ++ K +
Sbjct: 388 VS----PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHV 443
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE-YAYFN 342
+ E+ A ++ R + + L+D R++ A+++ R M R+ Y +
Sbjct: 444 RRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM-----KRRDNITYTS 498
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGF------LPDFVTE--------------------- 375
LV + +G+ A + + M G LP F++
Sbjct: 499 LVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSG 558
Query: 376 FSPSLVTYNALI--YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
FS + N+L+ Y C G +E+A + +A +PD VS+N ++SG G +
Sbjct: 559 FSGAASVLNSLVDMYSKC--GSLEDAKKVFEEIA----TPDVVSWNGLVSGLASNGFISS 612
Query: 434 AFELMVEM 441
A EM
Sbjct: 613 ALSAFEEM 620
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 148/344 (43%), Gaps = 35/344 (10%)
Query: 176 TNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTY 235
T+ + A L+D+M R WT S + A +F EM+ASG P+ T+
Sbjct: 71 TDGIWNARKLFDEM-SHRTVFAWTVMISA--FTKSQEFASALSLFEEMMASGTHPNEFTF 127
Query: 236 NELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE 295
+ ++ + + + + G ++V+ ++L + K G+ ++A E+ +
Sbjct: 128 SSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSS--- 184
Query: 296 RGILPNADT--YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVG-E 352
L NADT ++ +I L R+ EA + EM+ G+ P E+ + L+GA +G E
Sbjct: 185 ---LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLE 241
Query: 353 FSKAFH-------LRDEMIHKGFLPDFVTEFSP--------------SLVTYNALIYGNC 391
F K H + ++ K L DF ++FS + + +++ G
Sbjct: 242 FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
R +EA+G M + L P++ +Y+ ++S + L ++ + + G D
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 452 L--AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEH 493
+ A+ MK + EV + V A + VS ++ ++H
Sbjct: 362 VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDH 405
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 142/385 (36%), Gaps = 54/385 (14%)
Query: 49 TVSEMNRKGLDPAR--ESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYC 106
T EM GL P S I LC D ++ S+ + GF S N L+ Y
Sbjct: 312 TFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYM 371
Query: 107 RDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
+ + + G V PNVVS+ T+I GL +++ LL EM + + P+ VT +
Sbjct: 372 KCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLS 431
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIAS 226
++ A SK L H V + ++ ++
Sbjct: 432 GVLRACSK-----------------------------LRH------VRRVLEIHAYLLRR 456
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
+ +V N L+ AY +V A + R M R D + +L+T F + G+ E A
Sbjct: 457 HVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMA 512
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ M GI + + I L L + G S +LV
Sbjct: 513 LSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDM 572
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGM 406
Y G A + +E+ +P +V++N L+ G G + AL M
Sbjct: 573 YSKCGSLEDAKKVFEEIA------------TPDVVSWNGLVSGLASNGFISSALSAFEEM 620
Query: 407 AEMSLSPDDVSYNIVISGFCKLGEL 431
PD V++ I++S C G L
Sbjct: 621 RMKETEPDSVTFLILLSA-CSNGRL 644
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%)
Query: 230 PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
P+ +TYN +I +C +DRV DA + M +G +PD V +TLI +CK ++ E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL 349
EM RGI+ N TY+ LI C L A DL EM+ G++P + ++ C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 350 VGEFSKAFHLRDEM 363
E KAF + +++
Sbjct: 128 KKELRKAFAILEDL 141
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
++ P +++N++IDG C + R+ +A+ +L M SKG +PD VT++TLI K V
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK-AKRVDN 63
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIH 240
+ ++ +M ++ I TYT+LIH C ++D A + EMI+ G P +T++ ++
Sbjct: 64 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 123
Query: 241 AYCCRDRVQDAMGIFRGM 258
C + ++ A I +
Sbjct: 124 GLCSKKELRKAFAILEDL 141
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 200 TYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM 258
TY S+I C + VD A ++ M + G P +VT++ LI+ YC RV + M IF M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 259 PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRL 318
RG+ + V TLI FC+ G+L+ A ++ EM+ G+ P+ T+ ++ LC ++ L
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 319 SEAFDLFREM 328
+AF + ++
Sbjct: 132 RKAFAILEDL 141
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 293 MVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE 352
M+ I P TY+ +ID C Q R+ +A + M G SP + L+ YC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 353 FSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLS 412
+ EM +G + + VTY LI+G C +G ++ A +L M ++
Sbjct: 61 VDNGMEIFCEMHRRGIVAN--------TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Query: 413 PDDVSYNIVISGFCKLGELGKAFELMVEMDEA 444
PD ++++ +++G C EL KAF ++ ++ ++
Sbjct: 113 PDYITFHCMLAGLCSKKELRKAFAILEDLQKS 144
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNV 127
C Q + D+A ++L M + G P V T++ L++ YC+ KRVD M I M + N
Sbjct: 21 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 80
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
V++ T+I G C + A++LL EM S G+APD +T++ ++ + L +A A+ +
Sbjct: 81 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR-KAFAILE 139
Query: 188 QMKQ 191
+++
Sbjct: 140 DLQK 143
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 265 PDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
P + N++I FCK ++ A M M +G P+ T+S LI+ C +R+ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
F EM G+ Y L+ +C VG+ A L +EMI G PD+ +T++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY--------ITFH 119
Query: 385 ALIYGNCLLGRVEEALGILRGMAE 408
++ G C + +A IL + +
Sbjct: 120 CMLAGLCSKKELRKAFAILEDLQK 143
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P+ +TYN++I G C RV++A +L MA SPD V+++ +I+G+CK + E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
EM RG+ +++ V Y ++I+ +C G++ A L +EM G
Sbjct: 68 FCEMHR----RGI-----------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Query: 498 RASVLYIMLFDGFDKKARTRGA 519
+ + + G K R A
Sbjct: 113 PDYITFHCMLAGLCSKKELRKA 134
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 27/171 (15%)
Query: 328 MLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
ML + P Y +++ +C A + D M KG SP +VT++ LI
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC--------SPDVVTFSTLI 52
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
G C RV+ + I M + + V+Y +I GFC++G+L A +L+ EM G
Sbjct: 53 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG-- 110
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME----HH 494
D F ++ GL C++ E+ KA + ++++ HH
Sbjct: 111 VAPDYITFHCMLAGL-------------CSKKELRKAFAILEDLQKSEDHH 148
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 155/346 (44%), Gaps = 16/346 (4%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELL 150
+V T ++L + DEA+ +LR V + V++N VI K + A+ L+
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC- 209
+EM+ GL PD +TY ++I N + A L +M + + TY+ ++ +C
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYC-NAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 210 TYNVDKAYKVFTEMIASG----FEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
+ ++++A ++ EM P+ VTY +I A+C + RV++A+ + M +RG P
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 266 DAVICNTLITFFCKYGELEKAF-EMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL 324
+ V LI + E KA ++ ++V+ G + ++ +S L +R EA +
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKI 367
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
FR ML G+ P A ++ CL+ + F L E+ K ++ +
Sbjct: 368 FRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDI------HA 421
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGE 430
L+ G C G EA + + M + + +I K G+
Sbjct: 422 VLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGD 467
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 131/308 (42%), Gaps = 18/308 (5%)
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIAS 226
++ + NL A+ + + + + Y +I L +++ A + EM
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G P ++TY +I+ YC ++ DA + + M ++V + ++ CK G++E+A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 287 FEMRAEMVERG----ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
E+ AEM + I PNA TY+ +I C +RR+ EA + M G P
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 343 LVGAYCLVGEFSKAF-HLRDEMIHKG--FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEA 399
L+ E KA L D+++ G L + + + SL+ + R EEA
Sbjct: 315 LIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIR----------MKRWEEA 364
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLM 459
I R M + PD ++ + V C L F L E+++ +D + + L+
Sbjct: 365 EKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLL 424
Query: 460 KGLSDEVN 467
GL + N
Sbjct: 425 LGLCQQGN 432
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 127/275 (46%), Gaps = 12/275 (4%)
Query: 50 VSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
+ EM+ GL P + ++ C+ + D+A+++ EM + + TY+ +L C+
Sbjct: 188 IKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 108 DKRVDEAMGILRGMAVE-------PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAP 160
++ A+ +L M E PN V++ VI C KRR++EA +L M ++G P
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 161 DSVTYNTLITAMSKNTNLVIRAIALYDQM-KQQRIPVPWTTYTSLIHLLCTYNVDKAYKV 219
+ VT LI + +N V L D++ K + + ++ + L+ ++A K+
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKI 367
Query: 220 FTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGL--TPDAVICNTLITFF 277
F M+ G P + + + C +R D +++ + + + T D+ I L+
Sbjct: 368 FRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGL 427
Query: 278 CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
C+ G +A ++ M+++ + K+I+ L
Sbjct: 428 CQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEAL 462
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 16/261 (6%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEP---NVVSFNTVIDGLC 138
++ EM G P V TY +++ YC ++D+A + + M+ N V+++ +++G+C
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 139 AKRRIKEAEELLQEMNSKG----LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
++ A ELL EM + ++P++VTY +I A + V A+ + D+M R
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRR-VEEALLVLDRMG-NRG 304
Query: 195 PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR----DRVQD 250
+P T+ + + D+ K +++I + V+ +E + R ++
Sbjct: 305 CMP-NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEE 363
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP--NADTYSKL 308
A IFR M RG+ PD + C+ + C F + E+ ++ + ++D ++ L
Sbjct: 364 AEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVL 423
Query: 309 IDCLCPQRRLSEAFDLFREML 329
+ LC Q EA L + ML
Sbjct: 424 LLGLCQQGNSWEAAKLAKSML 444
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 307 KLIDCLCPQRRLS-EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+++ LC Q L+ EA + R+ + AY ++ + G+ + A L EM
Sbjct: 134 RIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDC 193
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
G PD ++TY ++I G C G++++A + + M++ + V+Y+ ++ G
Sbjct: 194 VGLYPD--------VITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGV 245
Query: 426 CKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGL--SDEVNYNSVINAYCAEGEVSK 483
CK G++ +A EL+ EM++ G GL + V Y VI A+C + V +
Sbjct: 246 CKSGDMERALELLAEMEKEDG-------------GGLISPNAVTYTLVIQAFCEKRRVEE 292
Query: 484 ALILHDEMEHHGSLRASVLYIMLFDG 509
AL++ D M + G + V +L G
Sbjct: 293 ALLVLDRMGNRGCMPNRVTACVLIQG 318
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 152/347 (43%), Gaps = 24/347 (6%)
Query: 108 DKRVDEAMGILRGMAVEPNV----VSFNTVIDGLCAKRRIKEAEELLQEM--NSKGLAPD 161
+K D + I R ++ P+ ++F+ ++ L K+ LL N L +
Sbjct: 57 EKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSE 116
Query: 162 SVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYK--- 218
+ ++ + N++ ++ ++ +++ I T SL LL V K YK
Sbjct: 117 RFAAHAIV--LYAQANMLDHSLRVFRDLEKFEIS---RTVKSLNALLFACLVAKDYKEAK 171
Query: 219 -VFTEMIAS-GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITF 276
V+ EM G EP L TYN +I +C + I M +G+ P++ +I+
Sbjct: 172 RVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISG 231
Query: 277 FCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
F + ++ ++ A M +RG+ TY+ I LC +++ EA L ML G+ P
Sbjct: 232 FYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPN 291
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV 396
Y +L+ +C +F +A L M+++G PD F+ LIY C G
Sbjct: 292 TVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT--------LIYYLCKGGDF 343
Query: 397 EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDE 443
E AL + + E + P +++G K ++ +A EL+ ++ E
Sbjct: 344 ETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Query: 50 VSEMNRKGLDPARESLIHLLCC--DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCR 107
V+EM RKG+ P S ++ + ++D KVL+ M + G V+TYN+ + + C+
Sbjct: 210 VAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCK 269
Query: 108 DKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
K+ EA +L GM ++PN V+++ +I G C + +EA++L + M ++G PDS
Sbjct: 270 RKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSEC 329
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMI 224
Y TLI + K + + M++ +P ++ SL++ L + + K +
Sbjct: 330 YFTLIYYLCKGGDFETALSLCKESMEKNWVP-SFSIMKSLVNGLAKDSKVEEAKELIGQV 388
Query: 225 ASGFEPSLVTYNEL 238
F ++ +NE+
Sbjct: 389 KEKFTRNVELWNEV 402
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 109/246 (44%), Gaps = 42/246 (17%)
Query: 57 GLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA 114
G++P E+ ++ C+ ++Y +++EM G P+ +++ +++ + + + DE
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 115 ---MGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITA 171
+ +++ V V ++N I LC +++ KEA+ LL M S G+ P++VT
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT------- 294
Query: 172 MSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEP 230
Y+ LIH C + ++A K+F M+ G +P
Sbjct: 295 -----------------------------YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKP 325
Query: 231 SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMR 290
Y LI+ C + A+ + + ++ P I +L+ K ++E+A E+
Sbjct: 326 DSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Query: 291 AEMVER 296
++ E+
Sbjct: 386 GQVKEK 391
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 118/313 (37%), Gaps = 65/313 (20%)
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR-GLTPDAVICN 271
+D + +VF ++ ++ + N L+ A ++A ++ MP G+ PD N
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 191
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
+I FC+ G ++ + AEM +GI PN+ ++ +I + + E + M
Sbjct: 192 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 251
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
G++ +G + TYN I C
Sbjct: 252 GVN---------------IG----------------------------VSTYNIRIQSLC 268
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK---LGELGKAFELMVEMDEAGGIR 448
+ +EA +L GM + P+ V+Y+ +I GFC E K F++MV R
Sbjct: 269 KRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVN-------R 321
Query: 449 GVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFD 508
G D Y ++I C G+ AL L E + + + L +
Sbjct: 322 GCK-----------PDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
Query: 509 GFDKKARTRGAKE 521
G K ++ AKE
Sbjct: 371 GLAKDSKVEEAKE 383
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 21/313 (6%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA----VEPNVVSF 130
Q + A+++ EM+N G + + Y L+ AY R R D A +L M +P+V ++
Sbjct: 165 QPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTY 224
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
+ +I + ++LL +M +G+ P+++TYNTLI A K V L +
Sbjct: 225 SILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLG 284
Query: 191 QQRI-PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQ 249
+ P WT ++L ++ + + +SG EP++ T+N L+ +Y +
Sbjct: 285 EDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYK 344
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+ M + V N +I F + G+L++ + M I P+ T L+
Sbjct: 345 KMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLV 404
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYA-------YFN-LVGAYCLVGEFSKAFHLRD 361
R S+A + +GG L E + +FN LV AY + +F++ + +
Sbjct: 405 RAYG---RASKA-----DKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLE 456
Query: 362 EMIHKGFLPDFVT 374
M KGF PD +T
Sbjct: 457 LMEKKGFKPDKIT 469
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 156/384 (40%), Gaps = 33/384 (8%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
+PNV + +I L ++ ++A EL QEM ++G + Y L++A S++ A
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDA-AF 205
Query: 184 ALYDQMKQQRIPVPWT-TYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHA 241
L ++MK P TY+ LI L + DK + ++M G P+ +TYN LI A
Sbjct: 206 TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Query: 242 YC-CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
Y + V+ + + + + PD+ N+ + F G++E + GI P
Sbjct: 266 YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEP 325
Query: 301 NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLR 360
N T++ L+D + + M S Y ++ A+ G+ + +L
Sbjct: 326 NIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF 385
Query: 361 DEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNI 420
M + PS VT +L+ + ++ G+LR + + D V +N
Sbjct: 386 RLMQSERIF--------PSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNC 437
Query: 421 VISGFC---KLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCA 477
++ + K E+ ELM E G + D++ Y +++ AY
Sbjct: 438 LVDAYGRMEKFAEMKGVLELM----EKKGFK--------------PDKITYRTMVKAYRI 479
Query: 478 EGEVSKALILHDEMEHHGSLRASV 501
G + LH +E G + V
Sbjct: 480 SGMTTHVKELHGVVESVGEAQVVV 503
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 149/398 (37%), Gaps = 44/398 (11%)
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDR-GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE 295
E +H R + A+ +F + ++ P+ I LI K + EKA E+ EM+
Sbjct: 119 ESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMIN 178
Query: 296 RGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG-GLSPREYAYFNLVGAYCLVGEFS 354
G + N + Y+ L+ R AF L M P + Y L+ ++ V F
Sbjct: 179 EGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFD 238
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI--YGNCLLGRVEEALGILRGMAEMSLS 412
K L +M +G P+ +TYN LI YG + VE +++ + E
Sbjct: 239 KVQDLLSDMRRQG--------IRPNTITYNTLIDAYGKAKMF-VEMESTLIQMLGEDDCK 289
Query: 413 PDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVI 472
PD + N + F G++ E+M E G++ + + +N ++
Sbjct: 290 PDSWTMNSTLRAFGGNGQI----EMMENCYEKFQSSGIEPNIRT-----------FNILL 334
Query: 473 NAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCT 532
++Y G K + + M+ + V Y ++ D F G L +M Y
Sbjct: 335 DSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF-------GRAGDLKQMEYLFRL 387
Query: 533 SLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFL 592
+ + + CS L + +G ++ VL + + + D +N L
Sbjct: 388 MQSERIFPSCVTLCS---------LVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCL 438
Query: 593 IVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKA 630
+ + R + + M GF + ++KA
Sbjct: 439 VDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 126/300 (42%), Gaps = 20/300 (6%)
Query: 51 SEMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFL----------PSVATYNV 100
SEM G P S+ + L L + K L ++ G+L P+V TYN+
Sbjct: 157 SEMKNSGCRPD-ASVYNALITAHLHTRDKAKALEKV--RGYLDKMKGIERCQPNVVTYNI 213
Query: 101 LLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
LL A+ + +VD+ + + + V P+V +FN V+D IKE E +L M S
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAY 217
PD +T+N LI + K M+ + P T + +I+ +DKA
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR--GMPDRGLTPDAVICNTLIT 275
VF +M + PS +TY +I Y V A IF G DR L A N ++
Sbjct: 334 WVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLK--ASTLNAMLE 391
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSP 335
+C+ G +A ++ + P+A TY L + L ++M G+ P
Sbjct: 392 VYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVP 451
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 16/309 (5%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLL--HAYCRDKR---------VDEAMGILRGMAV 123
Q A + SEM NSG P + YN L+ H + RDK +D+ GI R
Sbjct: 148 QTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIER---C 204
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
+PNVV++N ++ ++ + L ++++ ++PD T+N ++ A KN ++
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKN-GMIKEME 263
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAY 242
A+ +M+ T+ LI +K + F ++ S +P+L T+N +I Y
Sbjct: 264 AVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323
Query: 243 CCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNA 302
+ A +F+ M D P + +I + G + +A E+ E+ E + A
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKA 383
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
T + +++ C EA LF + P Y L AY + L +
Sbjct: 384 STLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
Query: 363 MIHKGFLPD 371
M G +P+
Sbjct: 444 MEKDGIVPN 452
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 145/351 (41%), Gaps = 18/351 (5%)
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITA--MSKNTNLVIRA 182
P+ ++ +I + K + + A L EM + G PD+ YN LITA +++ +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 183 IALY-DQMKQ-QRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELI 239
+ Y D+MK +R TY L+ + VD+ +F ++ S P + T+N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL 299
AY +++ + M PD + N LI + K E EK + ++
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P T++ +I R + +A +F++M P Y ++ Y G S+A +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+E+ D V + S T NA++ C G EA + + + PD +Y
Sbjct: 371 FEEVGES----DRVLKAS----TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK 422
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIRGVD-----LAVFSSLMKGLSDE 465
+ + K + LM +M++ G + L VF S + G E
Sbjct: 423 FLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGSRLPGSGSE 473
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 160/387 (41%), Gaps = 42/387 (10%)
Query: 159 APDSVTYNTLITAMSKNTN--LVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKA 216
+P S+ ++ I+++ K T+ + ++ L D + R + +S L + ++
Sbjct: 7 SPSSLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERE 66
Query: 217 YKVFTEMIASGF---EPSLVTYNELIHAYCC------------RDRVQDAMGIFRGM-PD 260
+V + S EP + T ++ + C D+ + +FR M
Sbjct: 67 NRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQ 126
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
R PD + + LI+ K G+ A + +EM G P+A Y+ LI R ++
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A + R L + E N+V L+ F+++ + + ++ F ++ SP +
Sbjct: 187 ALEKVRGYL-DKMKGIERCQPNVVTYNILLRAFAQSGKV--DQVNALFKDLDMSPVSPDV 243
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK---AFEL 437
T+N ++ G ++E +L M PD +++N++I + K E K F+
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 438 MVEMDEA-------------GGIRGVDLA--VFSSL--MKGLSDEVNYNSVINAYCAEGE 480
++ E G R +D A VF + M + + Y +I Y G
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 481 VSKALILHDEM-EHHGSLRASVLYIML 506
VS+A + +E+ E L+AS L ML
Sbjct: 364 VSRAREIFEEVGESDRVLKASTLNAML 390
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 42/348 (12%)
Query: 160 PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI--HLLCTYNVDKAY 217
PD+ Y+ LI+ M K + A+ L+ +MK + Y +LI HL + DKA
Sbjct: 131 PDNGVYSKLISVMGKKGQTRM-AMWLFSEMKNSGCRPDASVYNALITAHL---HTRDKA- 185
Query: 218 KVFTEMIA-----SGFE---PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
K ++ G E P++VTYN L+ A+ +V +F+ + ++PD
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
N ++ + K G +++ + M P+ T++ LID ++ + F+ ++
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI-- 387
P + +++ Y KA + +M ++P F +TY +I
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSF--------ITYECMIMM 357
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
YG C G V A I + E + N ++ +C+ G L +E D+
Sbjct: 358 YGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG-------LYIEADK---- 404
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
L +S + D Y + AY + IL +ME G
Sbjct: 405 ----LFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 127/303 (41%), Gaps = 26/303 (8%)
Query: 51 SEMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFL----------PSVATYNV 100
SEM G P S+ + L L + K L ++ G+L P+V TYN+
Sbjct: 157 SEMKNSGCRPD-ASVYNALITAHLHTRDKAKALEKV--RGYLDKMKGIERCQPNVVTYNI 213
Query: 101 LLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
LL A+ + +VD+ + + + V P+V +FN V+D IKE E +L M S
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAY 217
PD +T+N LI + K M+ + P T + +I+ +DKA
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFR--GMPDRGLTPDAVICNTLIT 275
VF +M + PS +TY +I Y V A IF G DR L A N ++
Sbjct: 334 WVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLK--ASTLNAMLE 391
Query: 276 FFCKYG---ELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
+C+ G E +K F + + P+A TY L + L ++M G
Sbjct: 392 VYCRNGLYIEADKLFHNASAF---RVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Query: 333 LSP 335
+ P
Sbjct: 449 IVP 451
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 16/309 (5%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLL--HAYCRDKR---------VDEAMGILRGMAV 123
Q A + SEM NSG P + YN L+ H + RDK +D+ GI R
Sbjct: 148 QTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIER---C 204
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
+PNVV++N ++ ++ + L ++++ ++PD T+N ++ A KN ++
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKN-GMIKEME 263
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAY 242
A+ +M+ T+ LI +K + F ++ S +P+L T+N +I Y
Sbjct: 264 AVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323
Query: 243 CCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNA 302
+ A +F+ M D P + +I + G + +A E+ E+ E + A
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKA 383
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
T + +++ C EA LF + P Y L AY + L +
Sbjct: 384 STLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
Query: 363 MIHKGFLPD 371
M G +P+
Sbjct: 444 MEKDGIVPN 452
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 145/351 (41%), Gaps = 18/351 (5%)
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITA--MSKNTNLVIRA 182
P+ ++ +I + K + + A L EM + G PD+ YN LITA +++ +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 183 IALY-DQMKQ-QRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELI 239
+ Y D+MK +R TY L+ + VD+ +F ++ S P + T+N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL 299
AY +++ + M PD + N LI + K E EK + ++
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P T++ +I R + +A +F++M P Y ++ Y G S+A +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+E+ D V + S T NA++ C G EA + + + PD +Y
Sbjct: 371 FEEVGE----SDRVLKAS----TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK 422
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIRGVD-----LAVFSSLMKGLSDE 465
+ + K + LM +M++ G + L VF S + G E
Sbjct: 423 FLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGSRLPGSGSE 473
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 160/387 (41%), Gaps = 42/387 (10%)
Query: 159 APDSVTYNTLITAMSKNTN--LVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKA 216
+P S+ ++ I+++ K T+ + ++ L D + R + +S L + ++
Sbjct: 7 SPSSLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERE 66
Query: 217 YKVFTEMIASGF---EPSLVTYNELIHAYCC------------RDRVQDAMGIFRGM-PD 260
+V + S EP + T ++ + C D+ + +FR M
Sbjct: 67 NRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQ 126
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
R PD + + LI+ K G+ A + +EM G P+A Y+ LI R ++
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
A + R L + E N+V L+ F+++ + + ++ F ++ SP +
Sbjct: 187 ALEKVRGYL-DKMKGIERCQPNVVTYNILLRAFAQSGKV--DQVNALFKDLDMSPVSPDV 243
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK---AFEL 437
T+N ++ G ++E +L M PD +++N++I + K E K F+
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 438 MVEMDEA-------------GGIRGVDLA--VFSSL--MKGLSDEVNYNSVINAYCAEGE 480
++ E G R +D A VF + M + + Y +I Y G
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 481 VSKALILHDEM-EHHGSLRASVLYIML 506
VS+A + +E+ E L+AS L ML
Sbjct: 364 VSRAREIFEEVGESDRVLKASTLNAML 390
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 42/348 (12%)
Query: 160 PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI--HLLCTYNVDKAY 217
PD+ Y+ LI+ M K + A+ L+ +MK + Y +LI HL + DKA
Sbjct: 131 PDNGVYSKLISVMGKKGQTRM-AMWLFSEMKNSGCRPDASVYNALITAHL---HTRDKA- 185
Query: 218 KVFTEMIA-----SGFE---PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
K ++ G E P++VTYN L+ A+ +V +F+ + ++PD
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
N ++ + K G +++ + M P+ T++ LID ++ + F+ ++
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI-- 387
P + +++ Y KA + +M ++P F +TY +I
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSF--------ITYECMIMM 357
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
YG C G V A I + E + N ++ +C+ G L +E D+
Sbjct: 358 YGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG-------LYIEADK---- 404
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
L +S + D Y + AY + IL +ME G
Sbjct: 405 ----LFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 70 CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK---RVDEAMGILRGMAVEPN 126
C L D EM+ GF P+ T+NVLL Y + K +V+E + + V +
Sbjct: 674 CARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VD 732
Query: 127 VVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALY 186
V+S+NT+I + ++ M G + YNTL+ A K+ + + ++
Sbjct: 733 VISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQME-KFRSIL 791
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
+MK+ TY +I++ +D+ V E+ SG P L +YN LI AY
Sbjct: 792 KRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG 851
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
V++A+G+ + M R + PD V L+T + E +A + M + GI
Sbjct: 852 GMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 123/576 (21%), Positives = 218/576 (37%), Gaps = 86/576 (14%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR---GMAVEPNVVSFNTVID 135
A +L M +GF P++ YN L+ Y + +++ A G+ + +EP+ S+ ++I+
Sbjct: 333 AESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIE 392
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK--NTNLVIRAIALYDQMKQQR 193
G +EA+ QE+ G P+S TLI +K + + I+ I + Q
Sbjct: 393 GWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQ- 451
Query: 194 IPVPWTTYTSLIHL-LCTYNVDKAYKVFTEMIASGFEPSL----VTYNELIHAYCCRDRV 248
Y+S++ + L Y V ++ F + +++ L+ AY V
Sbjct: 452 -------YSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMV 504
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
D +G+ R R ++ + + LI + G+L A ++ +E N S +
Sbjct: 505 DDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTM 564
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKA---FHLRDEMIH 365
ID SEA L+ + G+ + +V Y G +A + DE
Sbjct: 565 IDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE--Q 622
Query: 366 KGFLPD----------------------FVTEFSPSLVTYNALIYGNCLLGRVEEAL--- 400
K +PD S + +N +Y NC++ AL
Sbjct: 623 KDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMY-NCVINCCARALPLD 681
Query: 401 ---GILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSS 457
G M +P+ V++N+++ + K K EL + G +
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV---------- 731
Query: 458 LMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTR 517
D ++YN++I AY + + M+ G + Y L D + K +
Sbjct: 732 ------DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQME 785
Query: 518 GAKESLLRMFYDLCTSLPT-FTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNT 576
+ L RM TS P +TY+ +I +G +G +E A VL
Sbjct: 786 KFRSILKRM--KKSTSGPDHYTYNIMINI---------------YGEQGWIDEVADVLKE 828
Query: 577 VLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEM 612
+ + PD YN LI + V++A + EM
Sbjct: 829 LKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 168/400 (42%), Gaps = 19/400 (4%)
Query: 55 RKGLDPARES-LIHLLCC---DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR 110
+K D A ES L HLL C + Q +A K+ + + S ++ + ++ Y
Sbjct: 514 KKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGE 573
Query: 111 VDEAMGI---LRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN-SKGLAPDSVTYN 166
EA + L+ V + + F+ V+ ++EA +L+ M+ K + PD +
Sbjct: 574 FSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFR 633
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIA 225
++ K +L + LY ++++ I Y +I+ +D+ F EMI
Sbjct: 634 DMLRIYQK-CDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIR 692
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
GF P+ VT+N L+ Y + +F G+ D + NT+I + K +
Sbjct: 693 YGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTN 751
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
M G + + Y+ L+D +++ + + + M P Y Y ++
Sbjct: 752 MSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
Y G + + E+ G PD L +YN LI + G VEEA+G+++
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPD--------LCSYNTLIKAYGIGGMVEEAVGLVKE 863
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
M ++ PD V+Y +++ + E +A + + M + G
Sbjct: 864 MRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 200/489 (40%), Gaps = 50/489 (10%)
Query: 51 SEMNRKGLDPARESLIHL--LCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRD 108
E+ R G P +L L L D A K + +M G S + ++L AY +
Sbjct: 408 QELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAYEKV 466
Query: 109 KRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTY 165
++D +L+G + N SF++++ + + LL+E + A +S Y
Sbjct: 467 GKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLY 526
Query: 166 NTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMI 224
+ LI + K + + A+ +Y+ + + +++I + +A K++ +
Sbjct: 527 HLLICS-CKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLK 585
Query: 225 ASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD-RGLTPDAVICNTLITFFCKYGEL 283
+SG + ++ ++ Y +++A + M + + + PD + ++ + K
Sbjct: 586 SSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQ 645
Query: 284 EKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNL 343
+K + + + GI N + Y+ +I+C L E F EM+ G +P + L
Sbjct: 646 DKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVL 705
Query: 344 VGAYCLVGEFSKAFHL-----RDEMIH----------KGFLPDFVT-----------EFS 377
+ Y F K L R ++ G D+ FS
Sbjct: 706 LDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFS 765
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
SL YN L+ ++E+ IL+ M + + PD +YNI+I+ + + G + + ++
Sbjct: 766 VSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADV 825
Query: 438 MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSL 497
+ E+ E+G G DL +YN++I AY G V +A+ L EM +
Sbjct: 826 LKELKESG--LGPDLC-------------SYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Query: 498 RASVLYIML 506
V Y L
Sbjct: 871 PDKVTYTNL 879
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 112/529 (21%), Positives = 210/529 (39%), Gaps = 74/529 (13%)
Query: 6 RAFRRHIVRNSGMTRGFTAAAAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARESL 65
R ++++ R RG + LE E V +G + ++N + P +SL
Sbjct: 95 RGTKKYVARKFSFRRG------SNDLELENLFVNNGEI--------DVNYSAIKPG-QSL 139
Query: 66 IH----LLCCDQLQNDNAYKVLSEM-VNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG 120
H L + + NA K M N + + Y+++L R + D A +++
Sbjct: 140 EHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKE 199
Query: 121 MA----VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNT 176
+ + + FNTVI K +K A + M G+ P+ T L+ KN
Sbjct: 200 LCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNW 259
Query: 177 NLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV-DKAYKVFTEMIASGFEPSLVTY 235
N V A + M++ I V + Y+S+I + + DKA +V M L +
Sbjct: 260 N-VEEAEFAFSHMRKFGI-VCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENW 317
Query: 236 NELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE 295
+++AY + +++ A I M G +P+ + NTLIT + K ++E A + +
Sbjct: 318 LVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCN 377
Query: 296 RGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSK 355
G+ P+ +Y +I+ EA ++E+ G P + F L+ G+
Sbjct: 378 IGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDG 437
Query: 356 AFHLRDEMIHKG---------------------FLP-----DFVTEFSPSLVTYNALIYG 389
A ++M G +P F + ++++L+
Sbjct: 438 AIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMA 497
Query: 390 NCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM---VEMDEAGG 446
G V++ LG+LR + + Y+++I + G+L A ++ +E DE
Sbjct: 498 YVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEE-- 555
Query: 447 IRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
++L + S++ I+ Y GE S+A L+ ++ G
Sbjct: 556 ---INLHITSTM-------------IDIYTVMGEFSEAEKLYLNLKSSG 588
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 147/361 (40%), Gaps = 46/361 (12%)
Query: 109 KRVDEAMGILRGMAVEPNVVS----FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
K VD A+ + R +P + + + DGL R + L +EM + ++
Sbjct: 183 KEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLS 242
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMI 224
+N N VI+ +A K +++ V A+ F +
Sbjct: 243 FNAY--------NQVIQYLA-----KAEKLEV-------------------AFCCFKKAQ 270
Query: 225 ASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
SG + TYN L+ + + A I+ M D +I K G L+
Sbjct: 271 ESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLD 330
Query: 285 KAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLV 344
AF++ +M ER + P+ +S L+D + RL + ++ EM G G P + +L+
Sbjct: 331 AAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLI 390
Query: 345 GAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILR 404
+Y G+ A L DEM GF P+F Y +I + G++E A+ + +
Sbjct: 391 DSYAKAGKLDTALRLWDEMKKSGFRPNF--------GLYTMIIESHAKSGKLEVAMTVFK 442
Query: 405 GMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSD 464
M + P +Y+ ++ G++ A ++ M AG G L+ + SL+ L++
Sbjct: 443 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPG--LSSYISLLTLLAN 500
Query: 465 E 465
+
Sbjct: 501 K 501
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 6/229 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI---LRGMAVEPNVVSFNTV 133
D A+K+ +M PS + ++ L+ + + R+D +M + ++G P+ F ++
Sbjct: 330 DAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSL 389
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
ID ++ A L EM G P+ Y +I + +K+ L + D K
Sbjct: 390 IDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF 449
Query: 194 IPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+P P +TY+ L+ + + VD A K++ M +G P L +Y L+ + V A
Sbjct: 450 LPTP-STYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAG 508
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
I M G + D V + ++ + K ++ A + M GI N
Sbjct: 509 KILLEMKAMGYSVD-VCASDVLMIYIKDASVDLALKWLRFMGSSGIKTN 556
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 106/260 (40%), Gaps = 38/260 (14%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
A+++ M + L +TY +++ + + R+D A + + M + P+ F++++
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
D + R+ + ++ EM G P + + +LI + +K L
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKL---------------- 399
Query: 195 PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
D A +++ EM SGF P+ Y +I ++ +++ AM +
Sbjct: 400 -------------------DTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTV 440
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F+ M G P + L+ G+++ A ++ M G+ P +Y L+ L
Sbjct: 441 FKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLAN 500
Query: 315 QRRLSEAFDLFREMLGGGLS 334
+R + A + EM G S
Sbjct: 501 KRLVDVAGKILLEMKAMGYS 520
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 121/605 (20%), Positives = 239/605 (39%), Gaps = 81/605 (13%)
Query: 121 MAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVI 180
++ P+VV + V+ +IK AEE EM G PD+V T++ ++
Sbjct: 182 LSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSA 241
Query: 181 RAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVD-KAYKVFTEMIASGFEPSLVTYNELI 239
+ Y ++++RI + + Y ++ L + K ++ EM+ G P+ TY ++
Sbjct: 242 -MLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVV 300
Query: 240 HAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGIL 299
+Y + ++A+ F M G P+ V +++I+ K G+ EKA + +M +GI+
Sbjct: 301 SSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV 360
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P+ T + ++ +A LF +M + E ++ Y +G F A +
Sbjct: 361 PSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSM 420
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+E L D T + S V N+ G V +AL ++ M + +Y
Sbjct: 421 FEETERLNLLADEKTYLAMSQVHLNS--------GNVVKALDVIEMMKTRDIPLSRFAYI 472
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIRGVD----LAVFSSLMKG----------LSDE 465
+++ + K+ + A E + + G L +++ L G + D+
Sbjct: 473 VMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQ 532
Query: 466 VN-----YNSVINAYCAEGEVSKAL--------------------------ILHDEMEHH 494
V+ Y + + YC EG V++A I++ +H
Sbjct: 533 VHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHE 592
Query: 495 GSLRASVLYIM---LFDGFDKKARTRGAKESLLRMFY--DLCTSLPTFTYDTLIENCSNN 549
L S L +M L K +++L + + DL +S + + +
Sbjct: 593 AVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVS 652
Query: 550 EFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYK----------------PDGAVYNFLI 593
+ + + ++ G+R ++ E + L V +K P +V +I
Sbjct: 653 KAEMIADIIIRLGLR-MEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMI 711
Query: 594 VEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNI 653
+ R ++ AY ++ME G ++ L+ AL + G+H E +++ R+C
Sbjct: 712 DAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREA----EHISRTCLE 767
Query: 654 NGFEL 658
EL
Sbjct: 768 KNIEL 772
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 139/346 (40%), Gaps = 46/346 (13%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEEL 149
P + ++ AY R +++A G+ A +P V+ + +++ L + + +EAE +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
+ K + D+V YNTLI AM + L C
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKL-----------------------------QC 792
Query: 210 TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
A +++ M SG S+ TYN +I Y ++ A+ IF GL D I
Sbjct: 793 ------ASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKI 846
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
+I + K G++ +A + +EM ++GI P +Y+ ++ R E +L + M
Sbjct: 847 YTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAME 906
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYG 389
G Y L+ Y +F++A + KG +P + +AL+
Sbjct: 907 RNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKG-IPLSHSH---FSSLLSALVKA 962
Query: 390 NCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAF 435
G +EEA M+E +SPD ++ G+ G+ K
Sbjct: 963 ----GMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGI 1004
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 8/304 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG---MAVEPNVVSFNTV 133
++AY + E G P T ++L++A + EA I R +E + V +NT+
Sbjct: 721 EDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTL 780
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I + +++ A E+ + M++ G+ TYNT+I+ + L +AI ++ ++
Sbjct: 781 IKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQL-DKAIEIFSNARRSG 839
Query: 194 IPVPWTTYTSLI-HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
+ + YT++I H + +A +F+EM G +P +YN ++ C R+ +
Sbjct: 840 LYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI-CATSRLHHEV 898
Query: 253 G-IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
+ + M G D TLI + + + +A + + E+GI + +S L+
Sbjct: 899 DELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSA 958
Query: 312 LCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD 371
L + EA + +M G+SP ++ Y G+ K ++MI D
Sbjct: 959 LVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018
Query: 372 -FVT 374
FV+
Sbjct: 1019 RFVS 1022
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 154/355 (43%), Gaps = 16/355 (4%)
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGM-AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
V ++L+ ++ ++E IL M + + N VI + + +AE + +
Sbjct: 602 VMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADII 661
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI--HLLCTY 211
GL + T TLI + L A LY + + P + S+I ++ C +
Sbjct: 662 IRLGLRMEEETIATLIAVYGRQHKLK-EAKRLYLAAGESKTPGK-SVIRSMIDAYVRCGW 719
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++ AY +F E G +P VT + L++A R + ++A I R ++ + D V N
Sbjct: 720 -LEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYN 778
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
TLI + G+L+ A E+ M G+ + TY+ +I +L +A ++F
Sbjct: 779 TLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRS 838
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
GL E Y N++ Y G+ S+A L EM KG P +PS YN ++ C
Sbjct: 839 GLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG-----TPS---YNMMV-KIC 889
Query: 392 LLGRV-EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
R+ E +L+ M D +Y +I + + + +A + + + E G
Sbjct: 890 ATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKG 944
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 190/443 (42%), Gaps = 47/443 (10%)
Query: 38 VTSGGLLKTTTTVSEMNRKGLDPARESLIHLLCC-DQLQN-DNAYKVLSEMVNSGFLPSV 95
+ SG ++K + M + + +R + I +L C ++QN D A + + +G LP
Sbjct: 444 LNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTG-LPDA 502
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMAVEP---NVVSFNTVIDGLCAKRRIKEAEELLQE 152
++ N +L+ Y R ++A G ++ + V+ ++ + T + C + + EA++L+ +
Sbjct: 503 SSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVK 562
Query: 153 MNSKGLAPDSVTYNTLITAMS------------KNTNLVIRAIALYDQMKQQRIPVPWTT 200
M + D+ TL +M + L + A+ L ++ + + T
Sbjct: 563 MGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETK 622
Query: 201 ------------YTSLIHLLCTY----NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
+++ ++ ++ +V KA + +I G T LI Y
Sbjct: 623 AILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGR 682
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
+ ++++A ++ + TP + ++I + + G LE A+ + E E+G P A T
Sbjct: 683 QHKLKEAKRLYLAAGESK-TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVT 741
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
S L++ L + + EA + R L + Y L+ A G+ A + + M
Sbjct: 742 ISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERM- 800
Query: 365 HKGFLPDFVTEFSPSLVTYNALI--YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
H +P S+ TYN +I YG L ++++A+ I L D+ Y +I
Sbjct: 801 HTSGVP-------CSIQTYNTMISVYGRGL--QLDKAIEIFSNARRSGLYLDEKIYTNMI 851
Query: 423 SGFCKLGELGKAFELMVEMDEAG 445
+ K G++ +A L EM + G
Sbjct: 852 MHYGKGGKMSEALSLFSEMQKKG 874
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 138/650 (21%), Positives = 254/650 (39%), Gaps = 108/650 (16%)
Query: 85 EMVNSGFLPSVATYNVLLHAYCRDKRVDEAM---GILRGMAVEPNVVSFNTVIDGLCAKR 141
EMV G P+ TY +++ +Y + +EA+ G ++ + P V++++VI
Sbjct: 283 EMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAG 342
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWT-- 199
++A L ++M S+G+ P + T T+++ K N +A++L+ M++ +IP
Sbjct: 343 DWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP-KALSLFADMERNKIPADEVIR 401
Query: 200 ---------------------------------TYTSLIHL-LCTYNVDKAYKVFTEMIA 225
TY ++ + L + NV KA V M
Sbjct: 402 GLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKT 461
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
S Y ++ Y V A FR + GL PDA CN ++ + + EK
Sbjct: 462 RDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEK 520
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
A +++ + + + Y + C + ++EA DL +M G R V
Sbjct: 521 AKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKM---GREAR-------VK 570
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL-GRVEEALGILR 404
V +++ H+ ++K + V S V L+ L G + E IL
Sbjct: 571 DNRFVQTLAESMHI----VNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILN 626
Query: 405 GMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIR------GVDLAVFSSL 458
M + L V N VIS F + G++ KA E++ ++ G+R +AV+
Sbjct: 627 LMFKTDLGSSAV--NRVISSFVREGDVSKA-EMIADIIIRLGLRMEEETIATLIAVYGRQ 683
Query: 459 MKGLSDEVNY--------------NSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYI 504
K + Y S+I+AY G + A L E G +V
Sbjct: 684 HKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTIS 743
Query: 505 MLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN------------------- 545
+L + + + R A E + R + L T Y+TLI+
Sbjct: 744 ILVNALTNRGKHREA-EHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHT 802
Query: 546 ----CSNNEFKSVVELAKGFGMRGLK-NEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRR 600
CS + +++ + +G RGL+ ++A + + + D +Y +I+ + +
Sbjct: 803 SGVPCSIQTYNTMISV---YG-RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGG 858
Query: 601 NVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVLRS 650
+ +A +++ EM G S ++K H+EV ++Q + R+
Sbjct: 859 KMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERN 908
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 119/519 (22%), Positives = 218/519 (42%), Gaps = 115/519 (22%)
Query: 96 ATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS 155
A++N+++ Y R +R+ +A+ + M E + VS+ T+I G + EA EL +EM +
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMP-ERSCVSYTTLIKGYAQNNQWSEAMELFREMRN 166
Query: 156 KGLAPDSVTYNTLITAMSKNTNL----VIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-T 210
G+ + VT T+I+A S + +++++A+ ++ + R+ V T+L+H+ C
Sbjct: 167 LGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKL-EGRVFVS----TNLLHMYCLC 221
Query: 211 YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVIC 270
+ A K+F EM E +LVT+N +++ Y
Sbjct: 222 LCLKDARKLFDEMP----ERNLVTWNVMLNGY---------------------------- 249
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
K G +E+A E+ ++ E+ I+ ++ +ID + +L EA + EML
Sbjct: 250 -------SKAGLIEQAEELFDQITEKDIV----SWGTMIDGCLRKNQLDEALVYYTEMLR 298
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF---------------------- 368
G+ P E +L+ A SK L ++ +GF
Sbjct: 299 CGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKL 358
Query: 369 -LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
L F + + NALI G G VE+A R + + + D S+N +ISG+ +
Sbjct: 359 ALQQFEASVKDHIASRNALIAGFVKNGMVEQA----REVFDQTHDKDIFSWNAMISGYAQ 414
Query: 428 LGELGKAFELMVEMDEAGGIRG---VDLAVFSSLM--------KGLSDEVNYNS------ 470
A L EM + ++ ++VFS++ K D +N+++
Sbjct: 415 SLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDN 474
Query: 471 ----VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
+I+ Y G + AL + H + S I ++ + T G + L +
Sbjct: 475 LTAAIIDMYAKCGSIETALNI-----FHQTKNISSSTISPWNAIICGSATHGHAKLALDL 529
Query: 527 FYDLCTSLP----TFTYDTLIENCSNNEFKSVVELAKGF 561
+ DL SLP + T+ ++ C + +VEL K +
Sbjct: 530 YSDL-QSLPIKPNSITFVGVLSACCH---AGLVELGKTY 564
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 115/267 (43%), Gaps = 39/267 (14%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGL 137
KVL EM G LP T+N L+H Y ++ L M ++PN S V L
Sbjct: 930 KVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSL 989
Query: 138 CAKRRIKEAEELLQEMNSKGL-----------------------APDSVT---------- 164
C +K+A +L Q M SKG A D +T
Sbjct: 990 CDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP 1049
Query: 165 -YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTE 222
Y+ +I +S NL I L +K Q IP ++Y S+I+ L YN +DKA TE
Sbjct: 1050 NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGS-SSYDSVINGLLRYNQLDKAMDFHTE 1108
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
M+ G PS+ T++ L+H +C +V ++ + + M G +P + T+I F
Sbjct: 1109 MVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKN 1168
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLI 309
KA EM M + G + +T+ LI
Sbjct: 1169 TVKASEMMEMMQKCGYEVDFETHWSLI 1195
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 133/292 (45%), Gaps = 16/292 (5%)
Query: 95 VATYNVLLHAYCRDK---RVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQ 151
V YN+L+ R K V++ + ++G V P+ +FN ++ G + + L
Sbjct: 909 VIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLS 968
Query: 152 EMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH----- 206
M SKG+ P++ + + +++ N + V +A+ L+ M+ + W +S++
Sbjct: 969 AMISKGMKPNNRSLRAVTSSLCDNGD-VKKALDLWQVMESK----GWNLGSSVVQTKIVE 1023
Query: 207 -LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
L+ + KA T + +G Y+ +I R + A+ + M P
Sbjct: 1024 TLISKGEIPKAEDFLTRVTRNGMMAP--NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIP 1081
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
+ +++I +Y +L+KA + EMVE G+ P+ T+S L+ C ++ E+ L
Sbjct: 1082 GSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLI 1141
Query: 326 REMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFS 377
+ M+G G SP + + ++ + + KA + + M G+ DF T +S
Sbjct: 1142 KSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWS 1193
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 126/599 (21%), Positives = 215/599 (35%), Gaps = 106/599 (17%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV 123
SLI C + ND V N +LP + L + R V+E + + + +
Sbjct: 639 SLIRCFCKKETLND-LLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFI 697
Query: 124 EPNV---------VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK 174
+ V TV+ C A +++ + +G + YN LI +
Sbjct: 698 SYPLSQSEACRIFVEKLTVLGFSCI------AHSVVKRLEGEGCIVEQEVYNHLIKGLCT 751
Query: 175 NTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVT 234
A A+ D+M ++ + LI LC N KA F +A + S V
Sbjct: 752 EKKDSA-AFAILDEMLDKKHIPSLGSCLMLIPRLCRAN--KAGTAFN--LAEQIDSSYVH 806
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
Y LI ++ DA R M GL+ I N + +CK K E+ MV
Sbjct: 807 Y-ALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMV 865
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
+ I+ + +Y + + +C + + A L +L G +P +N++ Y F
Sbjct: 866 RKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYM----FR 921
Query: 355 KAFHLRD-----EMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEM 409
HL EM +G LPD T+N L++G +L L M
Sbjct: 922 AKNHLEVNKVLLEMQGRGVLPD--------ETTFNFLVHGYSSSADYSSSLRYLSAMISK 973
Query: 410 SLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYN 469
+ P++ S V S C G++ KA +L M+ G L V
Sbjct: 974 GMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGW--------------NLGSSVVQT 1019
Query: 470 SVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYD 529
++ ++GE+ KA + +G + +
Sbjct: 1020 KIVETLISKGEIPKAEDFLTRVTRNGMMAPN----------------------------- 1050
Query: 530 LCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVY 589
YD +I+ S+ RG + A +LNT+L+ P + Y
Sbjct: 1051 ---------YDNIIKKLSD---------------RGNLDIAVHLLNTMLKNQSIPGSSSY 1086
Query: 590 NFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNVL 648
+ +I R +DKA + + EMV G + + + L+ + E R+I++++
Sbjct: 1087 DSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMV 1145
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 141/665 (21%), Positives = 253/665 (38%), Gaps = 105/665 (15%)
Query: 72 DQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI------LRGMAVEP 125
D + A + M G +P + Y +L+ R R + A I R
Sbjct: 195 DDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHM 254
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
N+ S VI+ LC ++++EA L +++ + G +S Y+ + ++ + ++
Sbjct: 255 NIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFE-DLLSF 313
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLCT-YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
++K + P + ++H LC + ++AY E+ GF+ VT+ LI C
Sbjct: 314 IGEVKYE--PDVFVG-NRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCY 370
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
++ A+ + +G PD N +++ + G + + EM E G++ + T
Sbjct: 371 EGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLST 430
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVG------------- 351
+ ++ C R+ EA + +M G GL L A+ LVG
Sbjct: 431 FKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDND 490
Query: 352 -EFSKAFHLRDEMIHKGFLPDFVTEFSPS---------LVTYNALIYGNCLLGRVEEALG 401
FSKA D++ + +L + + L +N+LI G ++ AL
Sbjct: 491 STFSKA-EFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALR 549
Query: 402 ILRGMAEMSLSPDDVSYNIVISGFC--------------KLGEL-----GKAFELMVEMD 442
+L MA S+ +++ C K +L G+ +V+
Sbjct: 550 LLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEY 609
Query: 443 EAGGIRGVDLAVFSSL--MKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRAS 500
G +F + M D V Y S+I +C K L+D + G+ +
Sbjct: 610 CKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFC------KKETLNDLLNVWGAAQND 663
Query: 501 VLYIMLFDGFD--KKARTRGAKESLLRMFYDLCTSLPTFTYDT---LIENCSNNEFK--- 552
L D D +G E ++++F + S P + +E + F
Sbjct: 664 NWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIA 723
Query: 553 -SVVELAKGFG-----------MRGLKNE-----AASVLNTVLQWNYKPDGAVYNFLIVE 595
SVV+ +G G ++GL E A ++L+ +L + P LI
Sbjct: 724 HSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPR 783
Query: 596 HCRRRNVDKAYNMYMEM----VHYGFASHMFSVLALIKALFHVGR----HNEVRRVIQNV 647
CR A+N+ ++ VHY ALIK L G+ N++R ++ N
Sbjct: 784 LCRANKAGTAFNLAEQIDSSYVHY----------ALIKGLSLAGKMLDAENQLRIMLSNG 833
Query: 648 LRSCN 652
L S N
Sbjct: 834 LSSYN 838
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 130/332 (39%), Gaps = 24/332 (7%)
Query: 130 FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQM 189
FN++I ++ A LL EM G ++ L+ ++ + + +I+L ++
Sbjct: 531 FNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKW 590
Query: 190 KQQRIPVPWTTYTSLIHLLCTYNVDKAYK-VFTEMIASGFEPSLVTYNELIHAYCCRDRV 248
+ + T L+ C + K +F +M+ VTY LI +C ++ +
Sbjct: 591 PKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETL 650
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
D + ++ + PD C L + G +E+ ++ + L ++
Sbjct: 651 NDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIF 710
Query: 309 IDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF 368
++ L A + + + G G + Y +L+ C + S AF + DEM+ K
Sbjct: 711 VEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKH 770
Query: 369 LP----------------------DFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGM 406
+P + + S V Y ALI G L G++ +A LR M
Sbjct: 771 IPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSSYVHY-ALIKGLSLAGKMLDAENQLRIM 829
Query: 407 AEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
LS + YN++ G+CK K E++
Sbjct: 830 LSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVL 861
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR---GMAVEPNVVSFN 131
Q D A +EMV G PS++T++ L+H +C +V E+ +++ G+ P+ F
Sbjct: 1098 QLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFK 1157
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN 175
TVID ++ +A E+++ M G D T+ +LI+ MS +
Sbjct: 1158 TVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNMSSS 1201
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 120/295 (40%), Gaps = 31/295 (10%)
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE- 295
+LI Y + A+ +F M +GL P LI + E A+ + + VE
Sbjct: 188 DLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVET 247
Query: 296 RGILP--NADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEF 353
R L N D+ K+I+ LC +++ EA L R+++ G Y + Y +F
Sbjct: 248 RAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDF 307
Query: 354 SKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP 413
E+ ++ P + N +++ C E A + + +
Sbjct: 308 EDLLSFIGEV-----------KYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQ 356
Query: 414 DDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEV-NYNSVI 472
D+V++ I+I C G++ +A + E+ + KG +V +YN+++
Sbjct: 357 DEVTFGILIGWCCYEGDIKRAVLYLSEI----------------MSKGYKPDVYSYNAIL 400
Query: 473 NAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMF 527
+ +G + DEM+ +G + + + ++ G+ K + AK + +MF
Sbjct: 401 SGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMF 455
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 137/298 (45%), Gaps = 31/298 (10%)
Query: 91 FLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEP----------NVVSFNTVIDGLCAK 140
+ P+ + Y ++++ + + K DE ++R + +E N++ + G
Sbjct: 91 YQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAG---- 146
Query: 141 RRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP--- 197
RI A E+L M G P S ++N ++ NL++ A L+D++ + + P
Sbjct: 147 -RINRAIEILFGMPDFGCWPSSKSFNFIL-------NLLVSA-KLFDEIHKIFVSAPKLG 197
Query: 198 ----WTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
LI LC + N++ A ++ E P+++T++ LI +C + + ++A
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M + PD + N LI+ K G +E+ ++ M +G PN TY +++ L
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 313 CPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP 370
++R EA ++ +M+ G+ P +Y +V C + + +M++ GF+P
Sbjct: 318 LDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 17/252 (6%)
Query: 110 RVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYN 166
R++ A+ IL GM P+ SFN +++ L + + E ++ G+ D+ N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 167 TLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIA 225
LI + ++ NL A+ L D+ QQ+ T++ LI C ++A+K+ M
Sbjct: 207 ILIKGLCESGNLEA-ALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
EP +T+N LI + RV++ + + M +G P+ ++ YG L+K
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL-----YGLLDK 320
Query: 286 -----AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
A EM ++M+ G+ P+ +Y K++ LC + + E + R+M+ G P+ +
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Query: 341 FNLVGAYCLVGE 352
+ +V C+V +
Sbjct: 381 WKVV--QCVVSK 390
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 5/240 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRG---MAVEPNVVSFNTV 133
+ A ++L M + G PS ++N +L+ K DE I + VE + N +
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I GLC ++ A +LL E + P+ +T++ LI N A L ++M+++R
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFC-NKGKFEEAFKLLERMEKER 267
Query: 194 IPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
I T+ LI L V++ + M G EP+ TY E+++ + R +A
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
+ M G+ P + ++ C+ + + + +MV G +P + K++ C+
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCV 387
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 40/203 (19%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNV 127
C+ + A ++L E P+V T++ L+ +C + +EA +L M +EP+
Sbjct: 213 CESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDT 272
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITA-MSKNTNLVIRAIALY 186
++FN +I GL K R++E +LL+ M KG P+ TY ++ + K NL
Sbjct: 273 ITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL-------- 324
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+A ++ ++MI+ G PS ++Y +++ C
Sbjct: 325 ----------------------------EAKEMMSQMISWGMRPSFLSYKKMVLGLCETK 356
Query: 247 RVQDAMGIFRGMPDRGLTPDAVI 269
V + + R M + G P ++
Sbjct: 357 SVVEMDWVLRQMVNHGFVPKTLM 379
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 15/230 (6%)
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
+++A ++ M G PS ++N +++ + IF P G+ DA N
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
LI C+ G LE A ++ E ++ PN T+S LI C + + EAF L M
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
+ P + L+ G + L + M KG P+ P TY ++YG
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPN------PG--TYQEVLYGLLD 319
Query: 393 LGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
R EA ++ M + P +SY ++ G C+ + VEMD
Sbjct: 320 KKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV-------VEMD 362
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 19/246 (7%)
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCK---YGELEKAFEMRAEMVERGILPNAD 303
R+ A+ I GMPD G P + N ++ + E+ K F ++ G+ +A
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL---GVEIDAC 203
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
+ LI LC L A L E P + L+ +C G+F +AF L + M
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS 423
+ PD +T+N LI G GRVEE + +L M P+ +Y V+
Sbjct: 264 EKERIEPD--------TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLY 315
Query: 424 GFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE---VNYNSVINAYCAEGE 480
G +A E+M +M + G+R L+ + ++ GL + V + V+ G
Sbjct: 316 GLLDKKRNLEAKEMMSQMI-SWGMRPSFLS-YKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Query: 481 VSKALI 486
V K L+
Sbjct: 374 VPKTLM 379
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 8/165 (4%)
Query: 281 GELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
G + +A E+ M + G P++ +++ +++ L + E +F G+
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 341 FNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEAL 400
L+ C G A L DE + + P+++T++ LI G C G+ EEA
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQ--------KSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 401 GILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+L M + + PD +++NI+ISG K G + + +L+ M G
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG 302
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 115/282 (40%), Gaps = 48/282 (17%)
Query: 383 YNAL-IYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
YN + IYGN L GR+ A+ IL GM + P S+N +++ + ++ V
Sbjct: 135 YNLMRIYGN-LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSA 193
Query: 442 DEAGGIRGVDLAVFSSLMKGLSDEVN----------------------YNSVINAYCAEG 479
+ G +D + L+KGL + N ++ +I +C +G
Sbjct: 194 PKLGV--EIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKG 251
Query: 480 EVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTY 539
+ +A L + ME ++ + +L G KK R + L RM C P TY
Sbjct: 252 KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPG-TY 310
Query: 540 DTLIENCSNNEFKSVVELAKGFGMRGLKN--EAASVLNTVLQWNYKPDGAVYNFLIVEHC 597
++ +G+ K EA +++ ++ W +P Y +++ C
Sbjct: 311 QEVL-----------------YGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Query: 598 RRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNE 639
++V + + +MV++GF +++ + V ++N+
Sbjct: 354 ETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCV--VSKNND 393
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 160/386 (41%), Gaps = 36/386 (9%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
EPNV S+N ++ +I A +L E+ PD+V+YNTLI+ + + A+
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ----PDTVSYNTLISGYA-DARETFAAM 125
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
L+ +M++ V T + LI C VD ++ ++ GF+ N + Y
Sbjct: 126 VLFKRMRKLGFEVDGFTLSGLIAACCD-RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYS 184
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
+++A+ +F GM + D V N++I + ++ E KA + EM+ +G +
Sbjct: 185 KGGLLREAVSVFYGMDE---LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMF 241
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
T + +++ L L +++ G + L+ Y G + E
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD--SEK 299
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV-EEALGILRGMAEMSLSPDDVSYNIVI 422
+ + L SP LV +N +I G + + EEA+ R M + PDD S+ V
Sbjct: 300 VFQEIL-------SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352
Query: 423 SGFCKLGELGKAFE---LMVEMDEAGGIRGVDLAVFSSLMKG--LSD------------E 465
S L + + L ++ V+ A+ S K L D
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNA 412
Query: 466 VNYNSVINAYCAEGEVSKALILHDEM 491
V++N +I Y G ++AL+L+ M
Sbjct: 413 VSFNCMIKGYAQHGHGTEALLLYQRM 438
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 18/231 (7%)
Query: 123 VEPNVVSFNTVIDGLCAKRRI-KEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTN---- 177
+ P++V +NT+I G + +EA + ++M G PD ++ + +A S ++
Sbjct: 305 LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQC 364
Query: 178 LVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYN 236
I +A+ + RI V +LI L + N+ A VF M E + V++N
Sbjct: 365 KQIHGLAIKSHIPSNRISVN----NALISLYYKSGNLQDARWVFDRMP----ELNAVSFN 416
Query: 237 ELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER 296
+I Y +A+ +++ M D G+ P+ + +++ G++++ E M E
Sbjct: 417 CMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET 476
Query: 297 -GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
I P A+ YS +ID L +L EA M P A+ L+GA
Sbjct: 477 FKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM---PYKPGSVAWAALLGA 524
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 185/444 (41%), Gaps = 56/444 (12%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
P YN ++HAY K A + + +PN+ S+N ++ I E E ++
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIP-QPNLFSWNNLLLAYSKAGLISEMESTFEK 97
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ-RIPVPWTTYTSLIHLLCTY 211
+ + D VT+N LI S + LV A+ Y+ M + + T +++ L +
Sbjct: 98 LPDR----DGVTWNVLIEGYSL-SGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSN 152
Query: 212 -NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVIC 270
+V ++ ++I GFE L+ + L++ Y + DA +F G+ DR + V+
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR----NTVMY 208
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
N+L+ G +E A ++ RG+ ++ +++ +I L EA + FREM
Sbjct: 209 NSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF---------LPD---------- 371
GL +Y + +++ A +G ++ + +I F L D
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 372 ----FVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCK 427
F ++V++ A++ G GR EEA+ I M + PD + IS
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 428 LGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKG----------------LSDEVNYNSV 471
+ L + + + +G I V ++ + G + D V++ ++
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAM 443
Query: 472 INAYCAEGEVSKALILHDEMEHHG 495
++AY G + + L D+M HG
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHG 467
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 164/386 (42%), Gaps = 64/386 (16%)
Query: 98 YNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
YN L+ +++A+ + RGM E + VS+ +I GL KEA E +EM +G
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGM--EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 158 LAPDSVTYNTLIT------AMSKNTNL---VIR-------------------------AI 183
L D + +++ A+++ + +IR A
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
++D+MKQ+ + V WT ++ T ++A K+F +M SG +P T + I A
Sbjct: 326 TVFDRMKQKNV-VSWTAM--VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
+++ GL + N+L+T + K G+++ + + EM R +A
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAV 438
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
+++ ++ R E LF +M+ GL P ++ A G +
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG-----------L 487
Query: 364 IHKG--FLPDFVTEFS--PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+ KG + +E+ PS+ Y+ +I GR+EEA+ + GM PD + +
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWT 544
Query: 420 IVISGFCKLG--ELGK-AFELMVEMD 442
++S G E+GK A E ++E+D
Sbjct: 545 TLLSACRNKGNLEIGKWAAESLIELD 570
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 154/363 (42%), Gaps = 27/363 (7%)
Query: 81 KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAK 140
++ +++ GF + + LL+ Y + +A + G+ + N V +N+++ GL A
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD-DRNTVMYNSLMGGLLAC 218
Query: 141 RRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT 200
I++A +L +G+ DSV++ +I +++N L AI + +MK Q + +
Sbjct: 219 GMIEDALQLF-----RGMEKDSVSWAAMIKGLAQN-GLAKEAIECFREMKVQGLKMDQYP 272
Query: 201 YTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
+ S++ +++ ++ +I + F+ + + LI YC + A +F
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF---- 328
Query: 260 DRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLS 319
DR + V ++ + + G E+A ++ +M GI P+ T + I L
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
E + + GL +LV Y G+ + L +EM +
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR------------D 436
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA---FE 436
V++ A++ GR E + + M + L PD V+ VIS + G + K F+
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK 496
Query: 437 LMV 439
LM
Sbjct: 497 LMT 499
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 16/249 (6%)
Query: 86 MVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKE 145
++ + F + + L+ YC+ K + A + M + NVVS+ ++ G R +E
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEE 354
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI 205
A ++ +M G+ PD T I+A + + ++ Q + I Y ++
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACAN-----VSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 206 HLLCTY-----NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD 260
+ L T ++D + ++F EM V++ ++ AY R + + +F M
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV-ERGILPNADTYSKLIDCLCPQRRLS 319
GL PD V +I+ + G +EK M E GI+P+ YS +ID RL
Sbjct: 466 HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLE 525
Query: 320 EAFDLFREM 328
EA M
Sbjct: 526 EAMRFINGM 534
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVID- 135
+ A K+ +M SG P T + A C + E G A+ ++ + TV +
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISA-CANVSSLEEGSQFHGKAITSGLIHYVTVSNS 411
Query: 136 -----GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
G C I ++ L EMN + D+V++ +++A ++ + I L+D+M
Sbjct: 412 LVTLYGKCGD--IDDSTRLFNEMNVR----DAVSWTAMVSAYAQ-FGRAVETIQLFDKMV 464
Query: 191 QQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIAS-GFEPSLVTYNELIHAYCCRDRV 248
Q + T T +I V+K + F M + G PS+ Y+ +I + R+
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
++AM GMP PDA+ TL++ G LE
Sbjct: 525 EEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLE 557
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 161/394 (40%), Gaps = 72/394 (18%)
Query: 91 FLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELL 150
F SVA+ NVLL Y R + +EA+ + +GMAV+ VVS ++++ G C RI +A L
Sbjct: 174 FRDSVAS-NVLLSGYLRAGKWNEAVRVFQGMAVK-EVVSCSSMVHGYCKMGRIVDARSLF 231
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ------------------ 192
M + + +T+ +I K L+ +M+Q+
Sbjct: 232 DRMTERNV----ITWTAMIDGYFK-AGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 193 ----------------RIPVPWTTY--TSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLV 233
R+P+ + + SL+ + + +A VF M V
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK----NKDSV 342
Query: 234 TYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM 293
++N LI R ++ +A +F MP + D V +I F GE+ K E+
Sbjct: 343 SWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELF--- 395
Query: 294 VERGILPNAD--TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVG 351
G++P D T++ +I EA F +ML + P Y + +++ A +
Sbjct: 396 ---GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 352 EFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSL 411
+ + + ++ + D L N+L+ C G +A I ++E
Sbjct: 453 DLIEGLQIHGRVVKMNIVND--------LSVQNSLVSMYCKCGNTNDAYKIFSCISE--- 501
Query: 412 SPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
P+ VSYN +ISG+ G KA +L ++ +G
Sbjct: 502 -PNIVSYNTMISGYSYNGFGKKALKLFSMLESSG 534
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 165/426 (38%), Gaps = 83/426 (19%)
Query: 99 NVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL 158
N + + R+ + EA I R M+ ++VS+ +I ++ +A ++ EM
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMS-NRSIVSWIAMISAYAENGKMSKAWQVFDEM----- 107
Query: 159 APDSVT--YNTLITAMSKNTNLVIRAIALYDQMKQQ------------------------ 192
P VT YN +ITAM KN + +A L+ + ++
Sbjct: 108 -PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFL 166
Query: 193 --RIPVPWTTYTSLIHLLCTY----NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
PV + + LL Y ++A +VF M +V+ + ++H YC
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMG 222
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG-ILPNADTY 305
R+ DA +F M +R + + +I + K G E F + M + G + N++T
Sbjct: 223 RIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTL 278
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+ + R E + GL R F+L L+ +SK ++ +
Sbjct: 279 AVMFKACRDFVRYREGSQIH------GLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAV 332
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
G + + V++N+LI G ++ EA + M D VS+ +I GF
Sbjct: 333 FGVMKN------KDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGF 382
Query: 426 CKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKAL 485
GE+ K EL M E D + + ++I+A+ + G +AL
Sbjct: 383 SGKGEISKCVELFGMMPE-------------------KDNITWTAMISAFVSNGYYEEAL 423
Query: 486 ILHDEM 491
+M
Sbjct: 424 CWFHKM 429
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 112/253 (44%), Gaps = 13/253 (5%)
Query: 99 NVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL 158
N L+ Y + + EA + G+ + VS+N++I GL +++I EA EL ++M K
Sbjct: 314 NSLMSMYSKLGYMGEAKAVF-GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK-- 370
Query: 159 APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYK 218
D V++ +I S + + + L+ M ++ + WT S + ++A
Sbjct: 371 --DMVSWTDMIKGFSGKGE-ISKCVELFGMMPEKD-NITWTAMISA--FVSNGYYEEALC 424
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
F +M+ P+ T++ ++ A + + + I + + D + N+L++ +C
Sbjct: 425 WFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYC 484
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
K G A+++ + + E PN +Y+ +I +A LF + G P
Sbjct: 485 KCGNTNDAYKIFSCISE----PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGV 540
Query: 339 AYFNLVGAYCLVG 351
+ L+ A VG
Sbjct: 541 TFLALLSACVHVG 553
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 145/347 (41%), Gaps = 15/347 (4%)
Query: 112 DEAMGILRGMAVEPNV----VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNT 167
D + I R ++ P+ + F+ + L ++ +LL P S ++
Sbjct: 56 DRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAV 115
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIAS 226
+ N++ R+I + ++Q IP + +L+ L + +A +V+ EM
Sbjct: 116 RAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKM 175
Query: 227 -GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
G EP L TYN +I C + I M + + P A +I F K + ++
Sbjct: 176 YGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDE 235
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
++ M E G+ TY+ +I CLC +++ +EA L ++ + P Y L+
Sbjct: 236 VRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIH 295
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
+C +A +L + M+ G+ PD F+ LI+ C G E AL + R
Sbjct: 296 GFCSEENLDEAMNLFEVMVCNGYKPDSECYFT--------LIHCLCKGGDFETALILCRE 347
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDL 452
E + P +++G ++ +A EL+ + E R VDL
Sbjct: 348 SMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKE-KFTRNVDL 393
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 118/259 (45%), Gaps = 45/259 (17%)
Query: 57 GLDPARES---LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDE 113
G++P E+ +I +LC + ++Y +++EM P+ A++ +++ + ++++ DE
Sbjct: 177 GIEPDLETYNRMIRVLC-ESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDE 235
Query: 114 AMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLIT 170
++R M V V ++N +I LC +++ EA+ L+ + S + P+SVTY+
Sbjct: 236 VRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSL--- 292
Query: 171 AMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCT-YNVDKAYKVFTEMIASGFE 229
LIH C+ N+D+A +F M+ +G++
Sbjct: 293 ---------------------------------LIHGFCSEENLDEAMNLFEVMVCNGYK 319
Query: 230 PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
P Y LIH C + A+ + R ++ P + L+ ++++A E+
Sbjct: 320 PDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
Query: 290 RAEMVERGILPNADTYSKL 308
A +V+ N D ++++
Sbjct: 380 IA-VVKEKFTRNVDLWNEV 397
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 152/386 (39%), Gaps = 74/386 (19%)
Query: 147 EELLQEMNSKGLAPD----SVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYT 202
+ +L+ S L+PD + ++ + +++ + V + L ++ Q P +
Sbjct: 56 DRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAV 115
Query: 203 SLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR 261
I L N +D++ + F + ++ + N L+ A ++A ++ MP
Sbjct: 116 RAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKM 175
Query: 262 -GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
G+ PD N +I C+ G ++ + AEM + I P A ++ +ID + E
Sbjct: 176 YGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKE----E 231
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM-IHKGFLPDFVTEFSPS 379
FD E K + DE +H G
Sbjct: 232 KFD----------------------------EVRKVMRMMDEFGVHVG------------ 251
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA---FE 436
+ TYN +I C + EA ++ G+ + P+ V+Y+++I GFC L +A FE
Sbjct: 252 VATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFE 311
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALIL-HDEMEHHG 495
+MV G + D Y ++I+ C G+ ALIL + ME +
Sbjct: 312 VMV----CNGYK--------------PDSECYFTLIHCLCKGGDFETALILCRESMEKNW 353
Query: 496 SLRASVLYIMLFDGFDKKARTRGAKE 521
SV+ L +G +++ AKE
Sbjct: 354 VPSFSVMK-WLVNGLASRSKVDEAKE 378
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 177/405 (43%), Gaps = 78/405 (19%)
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
+ +NV + +Y R R +EA+ + + M + VS+N +I G + A +L EM
Sbjct: 64 IKEWNVAISSYMRTGRCNEALRVFKRMP-RWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-- 212
+ D V++N +I +N NL +A L++ M ++ + W T +L Y
Sbjct: 123 ER----DLVSWNVMIKGYVRNRNLG-KARELFEIMPERDV-CSWNT------MLSGYAQN 170
Query: 213 --VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP----- 265
VD A VF M E + V++N L+ AY ++++A +F+ + L
Sbjct: 171 GCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 266 ----------------------DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
D V NT+IT + + G++++A ++ + + +
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVF 282
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
T++ ++ R + EA +LF +M R +N + A + GE R EM
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKM-----PERNEVSWNAMLAGYVQGE-------RMEM 330
Query: 364 IHKGF--LPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIV 421
+ F +P ++ T+N +I G G++ EA + M + D VS+ +
Sbjct: 331 AKELFDVMP------CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAM 380
Query: 422 ISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEV 466
I+G+ + G +A L V+M+ GG ++ + FSS + +D V
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGG--RLNRSSFSSALSTCADVV 423
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 143/354 (40%), Gaps = 29/354 (8%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
++ ++N LL + + K++ EA M V +VVS+NT+I G +I EA +L E
Sbjct: 218 ALVSWNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDE- 275
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNV 213
D T+ +++ +N +V A L+D+M + R V W +L Y
Sbjct: 276 ---SPVQDVFTWTAMVSGYIQN-RMVEEARELFDKMPE-RNEVSWNA------MLAGYVQ 324
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
+ ++ E+ ++ T+N +I Y ++ +A +F MP R D V +
Sbjct: 325 GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAM 380
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
I + + G +A + +M G N ++S + L L ++ GG
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 440
Query: 334 SPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLL 393
+ L+ YC G +A L EM K +V++N +I G
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK------------DIVSWNTMIAGYSRH 488
Query: 394 GRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
G E AL M L PDD + V+S G + K + M + G+
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 122/287 (42%), Gaps = 50/287 (17%)
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSK 156
++N +L Y + +R++ A + M NV ++NT+I G +I EA+ L +M +
Sbjct: 314 SWNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 157 GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH---------- 206
D V++ +I S++ + A+ L+ QM+++ + ++++S +
Sbjct: 373 ----DPVSWAAMIAGYSQSGH-SFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 207 ----------------------LLCTY----NVDKAYKVFTEMIASGFEPSLVTYNELIH 240
LL Y ++++A +F EM +V++N +I
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIA 483
Query: 241 AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER-GIL 299
Y + A+ F M GL PD +++ G ++K + M + G++
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
PN+ Y+ ++D L L +A +L + M P + L+GA
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNM---PFEPDAAIWGTLLGA 587
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 22/269 (8%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
SG + +M R+G R S L C D + + ++ +V G+
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 446
Query: 98 YNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
N LL YC+ ++EA + + MA + ++VS+NT+I G + A + M +G
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT-YTSLIHLLCTYN-VDK 215
L PD T +++A S +T LV + + M Q +P + Y ++ LL ++
Sbjct: 506 LKPDDATMVAVLSACS-HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR--GLTPDA----VI 269
A+ + M FEP + L+ A RV + D+ + P+ V+
Sbjct: 565 AHNLMKNM---PFEPDAAIWGTLLGA----SRVHGNTELAETAADKIFAMEPENSGMYVL 617
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGI 298
+ L ++G++ K +R M ++G+
Sbjct: 618 LSNLYASSGRWGDVGK---LRVRMRDKGV 643
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 57/240 (23%)
Query: 379 SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
S V+YN +I G G E A + M E L VS+N++I G+ + LGKA EL
Sbjct: 94 SSVSYNGMISGYLRNGEFELARKLFDEMPERDL----VSWNVMIKGYVRNRNLGKARELF 149
Query: 439 VEMDEAGGIRGVDLAVFSSLMKGLS------------------DEVNYNSVINAYCAEGE 480
M E D+ +++++ G + ++V++N++++AY +
Sbjct: 150 EIMPER------DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSK 203
Query: 481 VSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYD 540
+ +A +L E+ A V + L GF KK + A R F+D +++
Sbjct: 204 MEEACMLFKSRENW----ALVSWNCLLGGFVKKKKIVEA-----RQFFDSMNVRDVVSWN 254
Query: 541 TLIENCSNNEFKSVVELAKGFGMRGLKNEA-----ASVLNTVLQWNYKPDGAVYNFLIVE 595
T+I G+ G +EA S + V W G + N ++ E
Sbjct: 255 TII---------------TGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEE 299
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 162/405 (40%), Gaps = 64/405 (15%)
Query: 57 GLDPARESLIHLLCCDQLQNDNAYKVLS--EMVNSGFLPSVATYNVLLHAYCRDKRVDEA 114
GL P + L C L+N + K + E + + TY+++L A K + A
Sbjct: 137 GLQPNAHACNSFLSC-LLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKAVAEVKGCESA 195
Query: 115 MGILRGMAVEP------NVVSFNTVIDGLCAK-RRIKEAEELLQEMNSKGLAPDSVTYNT 167
+ + R + EP +VV +NT I LC + + E E + + M G +TY+
Sbjct: 196 LRMFRELEREPKRRSCFDVVLYNTAI-SLCGRINNVYETERIWRVMKGDGHIGTEITYSL 254
Query: 168 LITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY--NVDKAYKVFTEMIA 225
L++ + + A+ +YD+M +I + ++I CT D A K+F M+
Sbjct: 255 LVSIFVRCGRSEL-ALDVYDEMVNNKISLREDAMYAMIS-ACTKEEKWDLALKIFQSMLK 312
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT---------- 275
G +P+LV N LI++ +V ++ + G PD N L+T
Sbjct: 313 KGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYED 372
Query: 276 ------------FFC--------------KYGELEKAFEMRAEMVERGILPNADTYSKLI 309
C K G EKA ++ EM G+ + +Y+ +I
Sbjct: 373 VLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVI 432
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
R+ A ++ M P + Y +LV + C+ G L DE +
Sbjct: 433 SACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGS------LWDE------V 479
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
D + + P + YNA I+G CL + A + M EM L PD
Sbjct: 480 EDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPD 524
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 197/483 (40%), Gaps = 90/483 (18%)
Query: 142 RIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTY 201
+++ A EL M GL P++ N+ ++ + +N + + +A +++ M+++ V TY
Sbjct: 122 KVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGD-IQKAFTVFEFMRKKE-NVTGHTY 179
Query: 202 TSLIHLLCTYN-VDKAYKVFTEMIASGFEPS---LVTYNELIHAYCCR-DRVQDAMGIFR 256
+ ++ + + A ++F E+ S +V YN I + C R + V + I+R
Sbjct: 180 SLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAI-SLCGRINNVYETERIWR 238
Query: 257 GMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQR 316
M G + + L++ F + G E A ++ EMV I D +I +
Sbjct: 239 VMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEE 298
Query: 317 RLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEF 376
+ A +F+ ML G+ P A L+ + G+ F + + G PD E+
Sbjct: 299 KWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPD---EY 355
Query: 377 SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSP-DDVSYNIVISGFCKLGELGKAF 435
T+NAL+ R E+ L + + +L ++ YN + KLG KA
Sbjct: 356 -----TWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAV 410
Query: 436 ELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSK-ALILHDEMEHH 494
+L+ EM+ +G L V +S +YN VI+A C + SK AL++++ M
Sbjct: 411 KLLYEMEGSG------LTVSTS---------SYNLVISA-CEKSRKSKVALLVYEHMAQ- 453
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSV 554
R K + TFTY +L+ +C
Sbjct: 454 ----------------------RDCKPN-------------TFTYLSLVRSCI------- 471
Query: 555 VELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVH 614
+G L +E +L V +PD ++YN I C RR A +Y++M
Sbjct: 472 ------WG--SLWDEVEDILKKV-----EPDVSLYNAAIHGMCLRREFKFAKELYVKMRE 518
Query: 615 YGF 617
G
Sbjct: 519 MGL 521
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Query: 45 KTTTTVSEMNRKGLDPARES--LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLL 102
K + EM GL + S L+ C ++ A V M P+ TY L+
Sbjct: 408 KAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
Query: 103 HAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDS 162
+ DE IL+ VEP+V +N I G+C +R K A+EL +M GL PD
Sbjct: 468 RSCIWGSLWDEVEDILK--KVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDG 525
Query: 163 VTYNTLITAMSKN 175
T ++ + K+
Sbjct: 526 KTRAMMLQNLKKH 538
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 172/416 (41%), Gaps = 34/416 (8%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
++ T++D RI+ + M KG+ D+VTY +LI +S + + V A+ L+++
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGD-VDGAMRLWEE 182
Query: 189 MKQQRIPVPWTTYTSLIHLL-CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
M+ +YT+ + +L V++A +V+ EM+ S P+ TY L+ +
Sbjct: 183 MRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
++A+ IF M + G+ PD CN LI K+GE + M E G++ Y
Sbjct: 243 CEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLR---YPI 299
Query: 308 LIDCLCPQRRLSEAFDLFRE---------MLGGGLSPREYAYFNLVGAYCLVGEFSKAFH 358
++ L + E+ DL RE + + A N S
Sbjct: 300 FVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLL 359
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTY--NALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
++ ++ L + + + + L ++ +A+I NC R E A EM +
Sbjct: 360 MKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKS 419
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEA----GGIRGVDLA--------------VFSSL 458
+Y +I F + EL K E++ EM +A G +G L VF L
Sbjct: 420 AYLALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLL 479
Query: 459 MKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKA 514
Y ++++ Y + G KA+ + EM + + Y +L G +K +
Sbjct: 480 PDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGLEKTS 535
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 47/261 (18%)
Query: 191 QQRIP---VPWTTYTSLIHLLCTYNVDKAYKVFTEMIA-SGFEPSLVTYNELIHAYCCRD 246
Q+++P V W ++ L + KA+ F GF+ TY ++ +
Sbjct: 77 QEQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAG 136
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
R+Q +F M ++G+ D V +LI + G+++ A + EM + G P +Y+
Sbjct: 137 RIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYT 196
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHK 366
+ L R+ EA ++++EML
Sbjct: 197 AYMKMLFADGRVEEATEVYKEMLR------------------------------------ 220
Query: 367 GFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFC 426
+ SP+ TY L+ G+ EEAL I M E+ + PD + NI+I+
Sbjct: 221 -------SRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKAL 273
Query: 427 KLGELGKAFELMVEMDEAGGI 447
K GE ++V M E G +
Sbjct: 274 KFGETSFMTRVLVYMKENGVV 294
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 162/406 (39%), Gaps = 60/406 (14%)
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKA---FEMRAEMVERGILPNADTYSKLIDCLCP 314
+P G+ D+ I N ++ + ++KA F A++ +G + TY+ ++D
Sbjct: 80 LPHLGVRWDSHIINRVLK---AHPPMQKAWLFFNWAAQI--KGFKHDHFTYTTMLDIFGE 134
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT 374
R+ + +F M G+ Y +L+ G+ A L +EM G P V
Sbjct: 135 AGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVV- 193
Query: 375 EFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKA 434
S Y +++ + GRVEEA + + M +SP+ +Y +++ G+ +A
Sbjct: 194 ----SYTAYMKMLFAD---GRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEA 246
Query: 435 FELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHH 494
++ +M E G D+ N +I GE S + M+ +
Sbjct: 247 LDIFFKMQEIGV---------------QPDKAACNILIAKALKFGETSFMTRVLVYMKEN 291
Query: 495 GSLRASVLYIMLFDGFDKKARTRGAKESLLR------MFYDLCTSLPTFTYDTLIENCSN 548
G + +++ + + G + LLR LC+S T + + N
Sbjct: 292 GVVLRYPIFVEALETL----KAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKN 347
Query: 549 NEFKSVVELAKGFGMRGLKNEAASV---LNTVLQWNYKPDGAVYNFLI---VEHCRRRNV 602
++ V+ + +K +V LN + N K D V + +I + CR
Sbjct: 348 SDDSRVIS-----SVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGA 402
Query: 603 DKAYNMYMEM-VHYGFASHMFSVLALIKALFHVGRHNEVRRVIQNV 647
A++ +EM +H +++ LALI R NE+ +VI+ V
Sbjct: 403 SLAFDYSLEMGIHLKKSAY----LALIGNFL---RSNELPKVIEVV 441
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 183/437 (41%), Gaps = 60/437 (13%)
Query: 90 GFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEEL 149
GF N L+ Y + A I M+ + + V++NT+I+GL ++A EL
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
+ M+ GL PDS T +L+ A S + L R L+ + +L++L
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTL-FRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 210 T-YNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAV 268
+++ A F E ++V +N ++ AY D ++++ IFR M + P+
Sbjct: 436 KCADIETALDYFLETEVE----NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 269 ICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL---- 324
+++ + G+LE ++ +++++ NA S LID +L A+D+
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 325 ---------------------------FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAF 357
FR+ML G+ E N V A + +
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611
Query: 358 HLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVS 417
+ + GF D F +LVT +Y C G++EE+ E + + D+++
Sbjct: 612 QIHAQACVSGFSSDL--PFQNALVT----LYSRC--GKIEESYLAF----EQTEAGDNIA 659
Query: 418 YNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVN------YNSV 471
+N ++SGF + G +A + V M+ GI + F S +K S+ N ++V
Sbjct: 660 WNALVSGFQQSGNNEEALRVFVRMNRE-GIDNNNF-TFGSAVKAASETANMKQGKQVHAV 717
Query: 472 I--NAYCAEGEVSKALI 486
I Y +E EV ALI
Sbjct: 718 ITKTGYDSETEVCNALI 734
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 146/347 (42%), Gaps = 46/347 (13%)
Query: 107 RDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRR--IKEAEELLQEMNSKGLAPDSVT 164
++KR+D + + PN + +++G C K + E +L ++ GL +
Sbjct: 68 QEKRIDS----VENRGIRPNHQTLKWLLEG-CLKTNGSLDEGRKLHSQILKLGLDSNGCL 122
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEM 223
L +L A ++D+M ++ I T+ +I L + N + + + +F M
Sbjct: 123 SEKLFDFYLFKGDLY-GAFKVFDEMPERTI----FTWNKMIKELASRNLIGEVFGLFVRM 177
Query: 224 IASGFEPSLVTYNELIHAYCCR------DRVQDAMGIFRGMPDRGLTPDAVICNTLITFF 277
++ P+ T++ ++ A CR D V+ I + +GL V+CN LI +
Sbjct: 178 VSENVTPNEGTFSGVLEA--CRGGSVAFDVVEQ---IHARILYQGLRDSTVVCNPLIDLY 232
Query: 278 CKYGELEKAFEMRAEMVERGI-LPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
+ G F A V G+ L + ++ +I L +EA LF +M G+ P
Sbjct: 233 SRNG-----FVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 337 EYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTY--NALIYGNCLLG 394
YA+ +++ A + L ++ GF D TY NAL+ LG
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD----------TYVCNALVSLYFHLG 337
Query: 395 RVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
+ A I M++ D V+YN +I+G + G KA EL M
Sbjct: 338 NLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRM 380
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 172/393 (43%), Gaps = 36/393 (9%)
Query: 84 SEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRI 143
++++ G ++ N LL Y + R+ +A + M V N +S+N +I G +
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVR-NRMSWNVMIKGFSQEYDC 240
Query: 144 KEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL--VIRAIALYDQMKQQRIPVPWTTY 201
+ A ++ + M + PD VT+ ++++ S+ V++ L +
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVF 300
Query: 202 TSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR 261
S+ L ++ A KV +I GFE L + N LIH Y + +V+DA +FR + ++
Sbjct: 301 FSVCAELEALSI--AEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNK 358
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVER----GILPNADTYSKLIDCLCPQRR 317
G+ N+LIT F G+L++A + +E+ E + N T++ +I Q R
Sbjct: 359 GIES----WNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGR 414
Query: 318 LSEAFDLFREM-----LGGGLSP-------REYAYFNL---VGAYCLVGEFSKAFHLRDE 362
++ + FR+M L ++ E NL + + + S+ +++
Sbjct: 415 GDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNA 474
Query: 363 MIHK----GFLPDFVTEFSP----SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
+++ G L + F L+++N++I G + G E+AL + M PD
Sbjct: 475 LVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPD 534
Query: 415 DVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
++ V+S G + K E+ M + G+
Sbjct: 535 GIALVAVLSACSHAGLVEKGREIFYSMSKRFGL 567
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 115/530 (21%), Positives = 202/530 (38%), Gaps = 76/530 (14%)
Query: 117 ILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNT 176
I R ++ N++S + L R + E L+ L D +N+++ A + +
Sbjct: 85 IFRSGSLAANLISVYARLGLLLDARNVFETVSLV-------LLSDLRLWNSILKA-NVSH 136
Query: 177 NLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY----NVDKAYKVFTEMIASGFEPSL 232
L A+ LY M+Q+ + LI C Y + +A+ T++I G + +L
Sbjct: 137 GLYENALELYRGMRQRGLTGD-GYILPLILRACRYLGRFGLCRAFH--TQVIQIGLKENL 193
Query: 233 VTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAE 292
NEL+ Y R+ DA +F MP R + + N +I F + + E A ++
Sbjct: 194 HVVNELLTLYPKAGRMGDAYNLFVEMPVR----NRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 293 MVERGILPNADTYSKLIDCLCPQRRLSEAFDLFR--EMLGGGLSPREYAYFNLVGAYCLV 350
M P+ T++ ++ C + + F M G +S A F V A +
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAE--L 307
Query: 351 GEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMS 410
S A + +I GF E+ PS NALI+ G+V++A + R +
Sbjct: 308 EALSIAEKVHGYVIKGGF-----EEYLPS---RNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 411 LSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNS 470
+ S+N +I+ F G+L +A L E++E + V V V + S
Sbjct: 360 IE----SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANV-----------VTWTS 404
Query: 471 VINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDL 530
VI +G +L +M+ L SV + +
Sbjct: 405 VIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILS---------------------I 443
Query: 531 CTSLPTFT-----YDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPD 585
C LP + +I + L + GL +E + V + D
Sbjct: 444 CAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI----RDKD 499
Query: 586 GAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVG 635
+N +I + +KA +M+ M+ GF +++A++ A H G
Sbjct: 500 LISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAG 549
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 125/281 (44%), Gaps = 25/281 (8%)
Query: 60 PARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILR 119
P+R +LIH+ Q + +A + ++ N G + ++N L+ ++ ++DEA+ +
Sbjct: 330 PSRNALIHVYG-KQGKVKDAEHLFRQIRNKG----IESWNSLITSFVDAGKLDEALSLFS 384
Query: 120 GMA-------VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAM 172
+ V+ NVV++ +VI G + R ++ E ++M + +SVT +++
Sbjct: 385 ELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSIC 444
Query: 173 SK----NTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGF 228
++ N I + M + + +L+++ + + E I
Sbjct: 445 AELPALNLGREIHGHVIRTSMSENIL-----VQNALVNMYAKCGLLSEGSLVFEAIR--- 496
Query: 229 EPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFE 288
+ L+++N +I Y + A+ +F M G PD + +++ G +EK E
Sbjct: 497 DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGRE 556
Query: 289 MRAEMVER-GILPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
+ M +R G+ P + Y+ ++D L L EA ++ + M
Sbjct: 557 IFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 127/296 (42%), Gaps = 22/296 (7%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLC 138
A KV ++ GF + + N L+H Y + +V +A + R + + S+N++I
Sbjct: 313 AEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR-NKGIESWNSLITSFV 371
Query: 139 AKRRIKEAEEL---LQEMNSK-GLAPDSVTYNTLITAMSKNTNLVIR---AIALYDQMKQ 191
++ EA L L+EMN + + VT+ ++I K N+ R ++ + QM+
Sbjct: 372 DAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVI----KGCNVQGRGDDSLEYFRQMQF 427
Query: 192 QRIPVPWTTYTSLIHL---LCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRV 248
++ T ++ + L N+ + ++ +I + +++ N L++ Y +
Sbjct: 428 SKVLANSVTICCILSICAELPALNLGR--EIHGHVIRTSMSENILVQNALVNMYAKCGLL 485
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKL 308
+ +F + D+ D + N++I + +G EKA M M+ G P+ +
Sbjct: 486 SEGSLVFEAIRDK----DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAV 541
Query: 309 IDCLCPQRRLSEAFDLFREMLGG-GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
+ + + ++F M GL P++ Y +V VG +A + M
Sbjct: 542 LSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 34/296 (11%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
S++ I L A + +E ++++ ++ S + YN++I +K L IRA+ ++
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKL-IRAVNIFRH 232
Query: 189 MKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRV 248
M + +L C + + +F ++ G + + H Y +
Sbjct: 233 MVTSK------------NLECRPTIRTYHILFKALLGRG------NNSYINHVY-----M 269
Query: 249 QDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEM-VERGILPNADTYSK 307
+ +FR M D G+ PD N L+ + + A + +M V PN+ TY
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKG 367
LI LC Q R A +L EM G G P +Y +LV A+ L GE A EMI G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 368 FLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS 423
+ DF ++Y L+ +C G+ +EA +L + E L D SY+ +++
Sbjct: 390 RVVDF--------ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRD-SYDKLVN 436
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 82 VLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV----EPNVVSFNTVIDGL 137
+ +MV+SG P V N L+ Y V++A+ I M+V EPN +++ +I GL
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVP 197
CA+ R A ELL EM KG P+ +YN+L+ A + + + L++ ++ R+ V
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV-VD 393
Query: 198 WTTYTSLIHLLC 209
+ +Y +L+ C
Sbjct: 394 FISYRTLVDESC 405
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 33/228 (14%)
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGIL---PNADTYSKLIDCLCPQRR--------LS 319
N++I +F K G+L +A + MV L P TY L L + +
Sbjct: 211 NSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYME 270
Query: 320 EAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPS 379
LFR+M+ G+ P +A LV Y L + A + +M V + P+
Sbjct: 271 TVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQM-------SVVYDCEPN 323
Query: 380 LVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMV 439
TY+ LI+G C GR A +L M P+ SYN +++ F GE+ A + +
Sbjct: 324 SFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLW 383
Query: 440 EMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALIL 487
EM E G R VD ++Y ++++ C +G+ +A L
Sbjct: 384 EMIENG--RVVDF-------------ISYRTLVDESCRKGKYDEATRL 416
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 65 LIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE 124
LIH LC Q + NA ++LSEM GF+P+ +YN L++A+ +D+A+ L M
Sbjct: 330 LIHGLCA-QGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIEN 388
Query: 125 PNVV---SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN 175
VV S+ T++D C K + EA LL+ + K L D +Y+ L+ + K+
Sbjct: 389 GRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVNVLHKD 441
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 160/378 (42%), Gaps = 44/378 (11%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLC 138
A V ++ GF P N L+ YC+ ++ A + ++ EP+ ++ T++ G C
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEIS-EPDKIARTTMVSGYC 91
Query: 139 AKRRIKEAEELLQEMNSKGLAP----DSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
A I A + ++ AP D+V YN +IT S N N AI L+ +MK +
Sbjct: 92 ASGDITLARGVFEK------APVCMRDTVMYNAMITGFSHN-NDGYSAINLFCKMKHEGF 144
Query: 195 PVPWTTYTSLIHLLCTYNVD--KAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
T+ S++ L D + + + SG N L+ Y +
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 253 GIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD--TYSKLID 310
R + D L D T++T + K G F++ E++E G+ N Y+ +I
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNG----YFDLGEELLE-GMDDNMKLVAYNAMIS 259
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVG--EFSKAFH---LRDEMIH 365
+ EA ++ R M+ G+ E+ Y +++ A G + K H LR E
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE--- 316
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
DF F SLV+ +Y C G+ +EA I M + D VS+N ++SG+
Sbjct: 317 -----DFSFHFDNSLVS----LYYKC--GKFDEARAIFEKMP----AKDLVSWNALLSGY 361
Query: 426 CKLGELGKAFELMVEMDE 443
G +G+A + EM E
Sbjct: 362 VSSGHIGEAKLIFKEMKE 379
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 142/320 (44%), Gaps = 29/320 (9%)
Query: 99 NVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGL 158
N L+ Y + + DEA I M + ++VS+N ++ G + I EA+ + +EM K +
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 159 APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIH---LLCTYNVDK 215
+++ +I+ +++N + L+ MK++ ++ I +L Y +
Sbjct: 383 ----LSWMIMISGLAEN-GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 216 AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT 275
Y +++ GF+ SL N LI Y V++A +FR MP D+V N LI
Sbjct: 438 QYH--AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP----CLDSVSWNALIA 491
Query: 276 FFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREM-LGGGLS 334
++G +A ++ EM+++GI P+ T ++ + + F M +
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 335 PREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLG 394
P Y L+ C G+FS A + +I LP F P+ + AL+ G + G
Sbjct: 552 PGADHYARLIDLLCRSGKFSDA----ESVIES--LP-----FKPTAEIWEALLSGCRVHG 600
Query: 395 RVEEALGILRGMAEMSLSPD 414
+E LGI+ L P+
Sbjct: 601 NME--LGIIAADKLFGLIPE 618
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 10/250 (4%)
Query: 53 MNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR 110
M R+G +P + + C N + ++++ GF S++ N L+ Y +
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 111 VDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLIT 170
V+EA + R M + VS+N +I L EA ++ +EM KG+ PD +T T++T
Sbjct: 468 VEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Query: 171 AMSKNTNLVIRAIALYDQMKQ-QRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFE 229
A S + LV + +D M+ RIP Y LI LLC + E + F+
Sbjct: 527 ACS-HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLP--FK 583
Query: 230 PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLIT-FFCKYGELEKAFE 288
P+ + L+ CR +GI GL P+ L++ G+ E+
Sbjct: 584 PTAEIWEALLSG--CRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVAR 641
Query: 289 MRAEMVERGI 298
+R M +RG+
Sbjct: 642 VRKLMRDRGV 651
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGI------------LRGMAVE 124
D A ++ EMV+ G P + TYN+LL C++ ++++A+ L V+
Sbjct: 33 DMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVK 92
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
PNVV++ T+I G C K +EA L ++M G PDS TYNTLI A ++ + A
Sbjct: 93 PNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA-E 151
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIA 225
L +M+ R +TY + +L +DK F EM++
Sbjct: 152 LIKEMRSCRFAGDASTYGLVTDMLHDGRLDKG---FLEMLS 189
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 22/197 (11%)
Query: 183 IALYDQMKQQRIPVPWTTYTSLIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHA 241
+ L+ +M Q+ + TYT+LI L + D A ++F EM++ G P ++TYN L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 242 YC---------CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAE 292
C +V+D +F + +G+ P+ V T+I+ FCK G E+A+ + +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 293 MVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE 352
M E G LP++ TY+ LI + + +L +EM R + Y LV +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-------RSCRFAGDASTYGLVTD 173
Query: 353 FSKAFHLRDEMIHKGFL 369
L D + KGFL
Sbjct: 174 M-----LHDGRLDKGFL 185
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 27/197 (13%)
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
N V++ T+I GL A+E+ +EM S G+ PD +TYN L+ + KN L +A
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVA- 73
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCR 245
V+ + +F + G +P++VTY +I +C +
Sbjct: 74 -------------------------GKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKK 108
Query: 246 DRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
++A +FR M + G PD+ NTLI + G+ + E+ EM +A TY
Sbjct: 109 GFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Query: 306 SKLIDCLCPQRRLSEAF 322
+ D L RL + F
Sbjct: 169 GLVTDML-HDGRLDKGF 184
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
M +FR M RGL + V TLI + G+ + A E+ EMV G+ P+ TY+ L+D
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 312 LCPQRRLSEA---------FDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
LC +L +A +DLF + G+ P Y ++ +C G +A+ L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 363 MIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI 422
M G LPD TYN LI + G + +++ M + D +Y +V
Sbjct: 121 MKEDGPLPDS--------GTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV- 171
Query: 423 SGFCKLGELGKAF 435
+ G L K F
Sbjct: 172 TDMLHDGRLDKGF 184
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 288 EMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAY 347
E+ EM +RG++ N TY+ LI L A ++F+EM+ G+ P Y L+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 348 CLVGEFSKAFHLRDEMIHKGFLPDFVTEFS-----PSLVTYNALIYGNCLLGRVEEALGI 402
C G+ KA L + G+ D S P++VTY +I G C G EEA +
Sbjct: 62 CKNGKLEKA--LVAGKVEDGW--DLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTL 117
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
R M E PD +YN +I + G+ + EL+ EM
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 32/178 (17%)
Query: 323 DLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVT 382
+LFREM GL Y L+ G+ A + EM+ G PD ++T
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPD--------IMT 53
Query: 383 YNALIYGNC---------LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
YN L+ G C + G+VE+ + ++ + P+ V+Y +ISGFCK G +
Sbjct: 54 YNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE 113
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
A+ L +M E G L D YN++I A+ +G+ + + L EM
Sbjct: 114 AYTLFRKMKEDG---------------PLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
VTY LI G G + A I + M + PD ++YNI++ G CK G+L KA
Sbjct: 17 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALV---- 72
Query: 441 MDEAGGIR-GVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRA 499
AG + G DL SL + V Y ++I+ +C +G +A L +M+ G L
Sbjct: 73 ---AGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPD 129
Query: 500 SVLY 503
S Y
Sbjct: 130 SGTY 133
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGIL-----RGMAVEPNVVSFN 131
++A + +M G S ++N LL+A K D+ + R + P+ +S+
Sbjct: 119 NHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYG 178
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
+I C ++A E++++M KG+ ++ + T+++++ K L + A L+++M +
Sbjct: 179 ILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEV-ADNLWNEMVK 237
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+ + Y I + ++ ++ EM + G +P ++YN L+ AYC R + +A
Sbjct: 238 KGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEA 297
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
++ G+ P+A TLI C E+ + + + V +P+ +T L+
Sbjct: 298 KKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVG 357
Query: 312 LCPQRRLSEAFDLFR 326
L ++ +A L R
Sbjct: 358 LVENKKRDDAKGLIR 372
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 15/278 (5%)
Query: 141 RRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT 200
RR + E L++ + + Y+TLI + + ++ A+ ++QM Q P +
Sbjct: 81 RRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQ-ASMFNHAMRTFEQMDQYGTPRSAVS 139
Query: 201 YTSLIHL-LCTYNVDKAYKVFTEMIA--SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRG 257
+ +L++ L + N DK ++F E+ + P ++Y LI +YC + A+ I R
Sbjct: 140 FNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQ 199
Query: 258 MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRR 317
M +G+ + T+++ K GELE A + EMV++G + Y+ + + Q+
Sbjct: 200 MQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYN--VRIMSAQKE 257
Query: 318 LSEAF-DLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEF 376
E +L EM GL P +Y L+ AYC G +A + +++G +
Sbjct: 258 SPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEA-----KKVYEGLEGN---NC 309
Query: 377 SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPD 414
+P+ T+ LI+ C E+ I + M PD
Sbjct: 310 APNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPD 347
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 235 YNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMV 294
Y+ LI +Y AM F M G AV N L+ +K ++ E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 295 ER--GILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE 352
+R I+P+ +Y LI C +A ++ R+M G G+ A+ ++ + GE
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 353 FSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLS 412
A +L +EM+ KG D YN I + E ++ M+ M L
Sbjct: 225 LEVADNLWNEMVKKGCELDN--------AAYNVRIM-SAQKESPERVKELIEEMSSMGLK 275
Query: 413 PDDVSYNIVISGFCKLGELGKA 434
PD +SYN +++ +C+ G L +A
Sbjct: 276 PDTISYNYLMTAYCERGMLDEA 297
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 8/236 (3%)
Query: 98 YNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
Y+ L+ +Y + + AM M + VSFN +++ + + +L E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 155 SK--GLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY- 211
+ + PD ++Y LI + ++ +AI + QM+ + + V +T+++ L
Sbjct: 165 QRYNKIIPDKISYGILIKSYC-DSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++ A ++ EM+ G E YN I + ++ + + M GL PD + N
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYN 282
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
L+T +C+ G L++A ++ + PNA T+ LI LC R + + +F++
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKK 338
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 27/208 (12%)
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGE-FSKAFHLRDEM 363
YS LI + A F +M G +PR FN + CL + F K L DE
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYG-TPRSAVSFNALLNACLHSKNFDKVPQLFDE- 162
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVIS 423
+P + P ++Y LI C G E+A+ I+R M + +++ ++S
Sbjct: 163 -----IPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILS 217
Query: 424 GFCKLGELGKAFELMVEMDEAG-------------------GIRGVDLAVFSSLMKGLSD 464
K GEL A L EM + G R +L S M D
Sbjct: 218 SLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPD 277
Query: 465 EVNYNSVINAYCAEGEVSKALILHDEME 492
++YN ++ AYC G + +A +++ +E
Sbjct: 278 TISYNYLMTAYCERGMLDEAKKVYEGLE 305
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 15/254 (5%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGL 137
+A ++ EM + +V T+ ++H YC K +D A + M E N+VS+NT+I G
Sbjct: 194 SARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWNTMIGGY 248
Query: 138 CAKRRIKEAEELLQEMN-SKGLAPDSVTYNTLITAMSKNTNLVI-RAIALYDQMKQQRIP 195
C ++ +E L QEM + L PD VT +++ A+S L + + Q K+
Sbjct: 249 CQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 196 VPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
V T ++ C ++KA ++F EM E + ++N +IH Y + A+ +F
Sbjct: 309 VKVCTAILDMYSKCG-EIEKAKRIFDEMP----EKQVASWNAMIHGYALNGNARAALDLF 363
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGEL-EKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
M PD + +IT C +G L E+ + M E G+ + Y ++D L
Sbjct: 364 VTMMIEE-KPDEITMLAVIT-ACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGR 421
Query: 315 QRRLSEAFDLFREM 328
L EA DL M
Sbjct: 422 AGSLKEAEDLITNM 435
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 128/320 (40%), Gaps = 67/320 (20%)
Query: 128 VSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYD 187
VS+ +I G + A +L +M D V YN ++ K+ ++ A L+D
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMT-SARRLFD 200
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
+M + + T+T++IH C ++D A K+F M E +LV++N +I YC
Sbjct: 201 EMTHKTV----ITWTTMIHGYCNIKDIDAARKLFDAMP----ERNLVSWNTMIGGYCQNK 252
Query: 247 RVQDAMGIFRGM-PDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
+ Q+ + +F+ M L PD V +++ G L +
Sbjct: 253 QPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGAL--------------------SL 292
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+ C +++L + + +L Y GE KA + DEM
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILD---------------MYSKCGEIEKAKRIFDEMPE 337
Query: 366 KGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGF 425
K + ++NA+I+G L G AL + M + PD+++ VI+
Sbjct: 338 K------------QVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITA- 383
Query: 426 CKLGEL----GKAFELMVEM 441
C G L K F +M EM
Sbjct: 384 CNHGGLVEEGRKWFHVMREM 403
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 143/368 (38%), Gaps = 82/368 (22%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
S ++ L+ Y R +D A + M +VV +N ++DG + A L EM
Sbjct: 143 SEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEM 202
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-N 212
T+ T+IT WTT +IH C +
Sbjct: 203 ----------THKTVIT---------------------------WTT---MIHGYCNIKD 222
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGM-PDRGLTPDAVICN 271
+D A K+F M E +LV++N +I YC + Q+ + +F+ M L PD V
Sbjct: 223 IDAARKLFDAMP----ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 272 TLI-----TFFCKYGELEKAFEMRAEMVERGILPNA--DTYSKLIDCLCPQRRLSEAFDL 324
+++ T GE F R ++ ++ + A D YSK C + + +A +
Sbjct: 279 SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSK-----CGE--IEKAKRI 331
Query: 325 FREMLGGGLSPREYAYFN-LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVT---EFSPSL 380
F EM ++ A +N ++ Y L G A L FVT E P
Sbjct: 332 FDEM-----PEKQVASWNAMIHGYALNGNARAALDL------------FVTMMIEEKPDE 374
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
+T A+I G VEE M EM L+ Y ++ + G L +A +L+
Sbjct: 375 ITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITN 434
Query: 441 MD-EAGGI 447
M E GI
Sbjct: 435 MPFEPNGI 442
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 110/286 (38%), Gaps = 46/286 (16%)
Query: 228 FEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAF 287
F P T+ L + V + + + G D + ++ + K+G++ A
Sbjct: 74 FAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCAR 133
Query: 288 EMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN-LVGA 346
EM R + S I C L A LF +M ++ +N ++
Sbjct: 134 NAFDEMPHRSEVSWTALISGYIRC----GELDLASKLFDQMP----HVKDVVIYNAMMDG 185
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGM 406
+ G+ + A L DEM HK +++T+ +I+G C + ++ A + M
Sbjct: 186 FVKSGDMTSARRLFDEMTHK------------TVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 407 AEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSL-------- 458
E +L VS+N +I G+C+ + + L EM + D+ + S L
Sbjct: 234 PERNL----VSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGA 289
Query: 459 ------------MKGLSDEVNY-NSVINAYCAEGEVSKALILHDEM 491
K L +V ++++ Y GE+ KA + DEM
Sbjct: 290 LSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEM 335
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 125/292 (42%), Gaps = 6/292 (2%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR----VDEAMGILRGMAVEPNVVSFNT 132
+ A +V ++ N +PS T N LL R ++ V E + M V +F
Sbjct: 125 EEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGI 184
Query: 133 VIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL-VIRAIALYDQMKQ 191
+ID LC + A EL++ M+ + D Y+ L++++ K+ + I + +++
Sbjct: 185 LIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRK 244
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDK-AYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD 250
R YT ++ L K V +M EP LV Y ++ +
Sbjct: 245 TRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPK 304
Query: 251 AMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID 310
A +F + GL PD N I CK ++E A +M + M + G PN TY+ LI
Sbjct: 305 ADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIK 364
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
L LS A L++EM G++ + + ++ AY V E A L +E
Sbjct: 365 ALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 128/310 (41%), Gaps = 31/310 (10%)
Query: 224 IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC-KYGE 282
++ F+ + ++I AY R+++A+ +F +P+ P A N L+ K
Sbjct: 100 VSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQS 159
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
LE E+ + G+ T+ LID LC + A +L R M + Y
Sbjct: 160 LELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSR 219
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDF-VTEFSPSLVTYNALIYGNCLLGRVEEALG 401
L+ + C + S F + G+L D T FSP L Y ++ GR +E +
Sbjct: 220 LLSSVCKHKD-SSCFDV------IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVS 272
Query: 402 ILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE-------------------MD 442
+L M + PD V Y IV+ G + KA +L E +
Sbjct: 273 VLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLC 332
Query: 443 EAGGIRGVDLAVFSSLMKGLSDE--VNYNSVINAYCAEGEVSKALILHDEMEHHGSLRAS 500
+ I G L + SS+ K S+ V YN +I A G++S+A L EME +G R S
Sbjct: 333 KQNDIEGA-LKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNS 391
Query: 501 VLYIMLFDGF 510
+ ++ +
Sbjct: 392 HTFDIMISAY 401
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 52/257 (20%)
Query: 83 LSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA---VEPNVVSFNTVIDGLCA 139
L ++ + F P + Y V++ R E + +L M VEP++V + V+ G+ A
Sbjct: 239 LEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIA 298
Query: 140 KRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWT 199
+A++L E+ GLAPD TYN I + K +
Sbjct: 299 DEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQND---------------------- 336
Query: 200 TYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMP 259
++ A K+ + M G EP++VTYN LI A + A +++ M
Sbjct: 337 -------------IEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEME 383
Query: 260 DRGLTPDAVICNTLITFF-------CKYGELEKAFEMRAEMVERGILPNADTYSKLIDCL 312
G+ ++ + +I+ + C +G LE+AF M + + ++I L
Sbjct: 384 TNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM-------NVFVKSSRIEEVISRL 436
Query: 313 CPQRRLSEAFDLFREML 329
C + + +A +L ++
Sbjct: 437 CEKGLMDQAVELLAHLV 453
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 127/329 (38%), Gaps = 33/329 (10%)
Query: 149 LLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL 208
LL P Y +I ++K++ L + LY ++ P + + +I
Sbjct: 59 LLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAY 118
Query: 209 -CTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC-CRDRVQDAMGIFRGMPDRGLTPD 266
+ +++A +VF ++ PS T N L+ R ++ I G+ +
Sbjct: 119 GFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLE 178
Query: 267 AVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDL-- 324
LI C+ GE++ A E+ M + ++ + YS+L+ +C + S FD+
Sbjct: 179 ESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKD-SSCFDVIG 237
Query: 325 -FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV---------- 373
++ SP Y ++ G + + ++M PD V
Sbjct: 238 YLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVI 297
Query: 374 -----------------TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDV 416
+P + TYN I G C +E AL ++ M ++ P+ V
Sbjct: 298 ADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVV 357
Query: 417 SYNIVISGFCKLGELGKAFELMVEMDEAG 445
+YNI+I K G+L +A L EM+ G
Sbjct: 358 TYNILIKALVKAGDLSRAKTLWKEMETNG 386
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 145/372 (38%), Gaps = 48/372 (12%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMA----VEPNVVSF 130
Q D A + M++ G P++ Y L+ Y + + +D+A L M +P+V +F
Sbjct: 159 QPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTF 218
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK 190
+I C R + ++ EM+ G+ +VTYNT+I K ++++M+
Sbjct: 219 TVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGK--------AGMFEEME 270
Query: 191 QQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFE-PSLVTYNELIHAYCCRDRVQ 249
V +MI G P + T N +I +Y ++
Sbjct: 271 S---------------------------VLADMIEDGDSLPDVCTLNSIIGSYGNGRNMR 303
Query: 250 DAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLI 309
+ G+ PD N LI F K G +K + M +R TY+ +I
Sbjct: 304 KMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVI 363
Query: 310 DCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
+ R+ + D+FR+M G+ P Y +LV AY G K + ++++ +
Sbjct: 364 ETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVV 423
Query: 370 PDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
D T F +N +I G + + M E PD +++ +I + G
Sbjct: 424 LD--TPF------FNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHG 475
Query: 430 ELGKAFELMVEM 441
EL +M
Sbjct: 476 IFDAVQELEKQM 487
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 116/272 (42%), Gaps = 6/272 (2%)
Query: 70 CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE----P 125
CC + D ++ EM G S TYN ++ Y + +E +L M + P
Sbjct: 225 CCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLP 284
Query: 126 NVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
+V + N++I R +++ E G+ PD T+N LI + K + + ++
Sbjct: 285 DVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGK-AGMYKKMCSV 343
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
D M+++ + TY +I ++K VF +M G +P+ +TY L++AY
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
V + R + + + D N +I + + G+L E+ +M ER P+ T
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKIT 463
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPR 336
++ +I +L ++M+ + +
Sbjct: 464 FATMIKTYTAHGIFDAVQELEKQMISSDIGKK 495
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 146/335 (43%), Gaps = 17/335 (5%)
Query: 53 MNRKGLDPARE---SLIHLLCCDQLQNDNAYKVLSEMVN-SGFLPSVATYNVLLHAYCRD 108
M +GL P + SLI + +L D A+ L M + S P V T+ VL+ C+
Sbjct: 170 MLSEGLKPTIDVYTSLISVYGKSELL-DKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKL 228
Query: 109 KRVDEAMGILRGMA---VEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLA-PDSVT 164
R D I+ M+ V + V++NT+IDG +E E +L +M G + PD T
Sbjct: 229 GRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCT 288
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYK----VF 220
N++I + N+ + + Y + + + TT+ LI ++ YK V
Sbjct: 289 LNSIIGSYGNGRNMR-KMESWYSRFQLMGVQPDITTFNILI---LSFGKAGMYKKMCSVM 344
Query: 221 TEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKY 280
M F + VTYN +I + R++ +FR M +G+ P+++ +L+ + K
Sbjct: 345 DFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKA 404
Query: 281 GELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
G + K + ++V ++ + ++ +I+ L+ +L+ +M P + +
Sbjct: 405 GLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITF 464
Query: 341 FNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTE 375
++ Y G F L +MI +TE
Sbjct: 465 ATMIKTYTAHGIFDAVQELEKQMISSDIGKKRLTE 499
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 187/485 (38%), Gaps = 82/485 (16%)
Query: 19 TRGFTAAAAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARE-SLIHLLCCDQLQND 77
T T + + +E + + GL+ T R +DP +E S I L+ D
Sbjct: 44 TISITPTMCSTKVPNERTEKMNSGLIST--------RHQVDPKKELSRI-------LRTD 88
Query: 78 NAYKVLSEMVNSGFLPSVATYNVL--LHAYCRDKRVDEAMGIL----RGMAVEPNVVSFN 131
A K + NS ++ VL L ++ R A+ I + EP ++
Sbjct: 89 AAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYT 148
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
+ L ++ +A L + M S+GL P Y +LI+ K + L+ +A + + MK
Sbjct: 149 KLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGK-SELLDKAFSTLEYMKS 207
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
S +P + T+ LI C R
Sbjct: 208 ---------------------------------VSDCKPDVFTFTVLISCCCKLGRFDLV 234
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG-ILPNADTYSKLID 310
I M G+ V NT+I + K G E+ + A+M+E G LP+ T + +I
Sbjct: 235 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIG 294
Query: 311 CLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLP 370
R + + + G+ P + L+ ++ G + K + D M K F
Sbjct: 295 SYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFM-EKRF-- 351
Query: 371 DFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGE 430
FS + VTYN +I GR+E+ + R M + P+ ++Y +++ + K G
Sbjct: 352 -----FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAG- 405
Query: 431 LGKAFELMVEMDEA-GGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHD 489
L+V++D I D+ + D +N +INAY G+++ L+
Sbjct: 406 ------LVVKIDSVLRQIVNSDVVL---------DTPFFNCIINAYGQAGDLATMKELYI 450
Query: 490 EMEHH 494
+ME
Sbjct: 451 QMEER 455
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 140/372 (37%), Gaps = 44/372 (11%)
Query: 300 PNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHL 359
P TY+KL L ++ +A LF ML GL P Y +L+ Y KAF
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+ M V++ P + T+ LI C LGR + I+ M+ + + V+YN
Sbjct: 202 LEYMKS-------VSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYN 254
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGI---------------RGVDLAVFSS------L 458
+I G+ K G + ++ +M E G G ++ S L
Sbjct: 255 TIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQL 314
Query: 459 MKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRG 518
M D +N +I ++ G K + D ME +V Y ++ + F K R
Sbjct: 315 MGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEK 374
Query: 519 AKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVL 578
+ +M Y + TY CS L + GL + SVL ++
Sbjct: 375 MDDVFRKMKYQ-GVKPNSITY------CS---------LVNAYSKAGLVVKIDSVLRQIV 418
Query: 579 QWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHN 638
+ D +N +I + + ++ +Y++M + +IK G +
Sbjct: 419 NSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFD 478
Query: 639 EVRRVIQNVLRS 650
V+ + + ++ S
Sbjct: 479 AVQELEKQMISS 490
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 136/317 (42%), Gaps = 50/317 (15%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMG-ILRGMAVEP-NVVSFNTVIDGLC-AKRRIKEAEEL 149
P + LL A CR +++A +L + P +V FN +++G C + EA+ +
Sbjct: 222 PYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRI 281
Query: 150 LQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLC 209
+EM + + P+ +Y+ +I+ SK NL ++ LYD+MK++
Sbjct: 282 WREMGNYCITPNKDSYSHMISCFSKVGNL-FDSLRLYDEMKKR----------------- 323
Query: 210 TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVI 269
G P + YN L++ D +AM + + + + GL PD+V
Sbjct: 324 -----------------GLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVT 366
Query: 270 CNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREML 329
N++I C+ G+L+ A + A M+ + P DT+ ++ + ++ L ++ +M
Sbjct: 367 YNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTL----EVLGQMK 422
Query: 330 GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYG 389
L P E + ++G + A + EM F +P+L Y A I G
Sbjct: 423 ISDLGPTEETFLLILGKLFKGKQPENALKIWAEM------DRFEIVANPAL--YLATIQG 474
Query: 390 NCLLGRVEEALGILRGM 406
G +E+A I M
Sbjct: 475 LLSCGWLEKAREIYSEM 491
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 37/304 (12%)
Query: 171 AMSKNTNLVIRAIALYDQMKQQRIPVPW-TTYTSLIHLLCTY-NVDKAYKVFTEMIASG- 227
A + +T+ IR + D+ K P+ + L+ LC + +++KA + M+AS
Sbjct: 200 AAANDTSQAIRTFDIMDKFKH----TPYDEAFQGLLCALCRHGHIEKAEEF---MLASKK 252
Query: 228 -FEPSLVTYNELIHAYC-CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
F + +N +++ +C V +A I+R M + +TP+ + +I+ F K G L
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
+ + EM +RG+ P + Y+ L+ L + EA L +++ GL P Y +++
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDF-----------------------VTEFSPSLVT 382
C G+ A ++ MI + P +++ P+ T
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEET 432
Query: 383 YNALIYGNCLLGRV-EEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
+ LI G G+ E AL I M + + Y I G G L KA E+ EM
Sbjct: 433 F-LLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Query: 442 DEAG 445
G
Sbjct: 492 KSKG 495
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 238 LIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG 297
++ Y + A+ F M TP L+ C++G +EKA E + +
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 298 ILP-NADTYSKLIDCLCP-QRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSK 355
+ P + + ++ +++ C ++EA ++REM ++P + +Y +++ + VG
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 356 AFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDD 415
+ L DEM +G +P + YN+L+Y +EA+ +++ + E L PD
Sbjct: 313 SLRLYDEMKKRG--------LAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDS 364
Query: 416 VSYNIVISGFCKLGELGKAFELMVEM 441
V+YN +I C+ G+L A ++ M
Sbjct: 365 VTYNSMIRPLCEAGKLDVARNVLATM 390
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 103/252 (40%), Gaps = 38/252 (15%)
Query: 52 EMNRKGLDPARESLIHLLCCDQLQND--NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDK 109
EM + P ++S H++ C + ++ ++ EM G P + YN L++ R+
Sbjct: 284 EMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTRED 343
Query: 110 RVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLI 169
DEAM +L++++N +GL PDSVTYN++I
Sbjct: 344 CFDEAM--------------------------------KLMKKLNEEGLKPDSVTYNSMI 371
Query: 170 TAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFE 229
+ + L + L + + P T + L N +K +V +M S
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSP----TVDTFHAFLEAVNFEKTLEVLGQMKISDLG 427
Query: 230 PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
P+ T+ ++ + ++A+ I+ M + + + I G LEKA E+
Sbjct: 428 PTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREI 487
Query: 290 RAEMVERGILPN 301
+EM +G + N
Sbjct: 488 YSEMKSKGFVGN 499
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 202/500 (40%), Gaps = 83/500 (16%)
Query: 69 LCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVV 128
+C +L D ++ +V SG + N LL Y + R D+A + R M+ + V
Sbjct: 248 VCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTV 306
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNL-VIRAIALYD 187
++N +I G ++E+ EM S G+ PD++T+++L+ ++SK NL + I Y
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Query: 188 QMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
+ + T+ + C V A +F++ + +V + +I Y
Sbjct: 367 MRHSISLDIFLTSALIDAYFKCR-GVSMAQNIFSQCNSV----DVVVFTAMISGYLHNGL 421
Query: 248 VQDAMGIFRGMPDRGLTPDAVI--------------------------------CN---T 272
D++ +FR + ++P+ + CN
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
+I + K G + A+E+ + +R I+ +++ +I S A D+FR+M G
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIV----SWNSMITRCAQSDNPSAAIDIFRQM---G 534
Query: 333 LSPREYAYFNLVGAYCLVG-----EFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALI 387
+S Y ++ A F KA H MI D +E +L+ +
Sbjct: 535 VSGICYDCVSISAALSACANLPSESFGKAIH--GFMIKHSLASDVYSE--STLID----M 586
Query: 388 YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGI 447
Y C G ++ A+ + + M E ++ VS+N +I+ G+L + L EM E GI
Sbjct: 587 YAKC--GNLKAAMNVFKTMKEKNI----VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM-EHHGSLRASVLYIML 506
R D++ + +I++ C G+V + + M E +G Y +
Sbjct: 641 R--------------PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 507 FDGFDKKARTRGAKESLLRM 526
D F + R A E++ M
Sbjct: 687 VDLFGRAGRLTEAYETVKSM 706
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 143/320 (44%), Gaps = 46/320 (14%)
Query: 149 LLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQ-RIPVPWTTYTSLIHL 207
L ++M + DSV+YN++I K L++ A L+D M + + + W + S +
Sbjct: 174 LSRQMFDRMPKRDSVSYNSMIDGYVK-CGLIVSARELFDLMPMEMKNLISWNSMISG-YA 231
Query: 208 LCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDA 267
+ VD A K+F +M E L+++N +I Y R++DA G+F MP R D
Sbjct: 232 QTSDGVDIASKLFADMP----EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DV 283
Query: 268 VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFRE 327
V T+I + K G + A + +M R ++ Y+ ++ + EA ++F +
Sbjct: 284 VTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV----AYNSMMAGYVQNKYHMEALEIFSD 339
Query: 328 MLG-GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGF---------LPDFVTEF- 376
M L P + ++ A +G SKA + ++ K F L D ++
Sbjct: 340 MEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCG 399
Query: 377 -------------SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVI- 422
+ S+ +NA+I G + G E A +L + +SL PDD+++ V+
Sbjct: 400 SIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLN 459
Query: 423 ----SGFCKLGELGKAFELM 438
SG K G L FELM
Sbjct: 460 ACSHSGLVKEGLL--CFELM 477
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 194/466 (41%), Gaps = 51/466 (10%)
Query: 45 KTTTTVSEMNRKGLDPARESLIHLL-CCDQLQN-DNAYKVLSEMVNSGFLPSVATYNVLL 102
+T +M+ G+ P+ ++ +L C +++N + + ++ + +G V L+
Sbjct: 87 ETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLV 146
Query: 103 HAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDS 162
Y R ++ A +A E N VS+N+++ G + EA + ++ K D+
Sbjct: 147 GLYSRLGYIELAKKAFDDIA-EKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DA 201
Query: 163 VTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTE 222
V++N +I++ +K ++ A +L+ M + P W L+ Y + K+
Sbjct: 202 VSWNLIISSYAKKGDMG-NACSLFSAMPLKS-PASWNI------LIGGYVNCREMKLART 253
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
+ + + V++ +I Y VQ A +FR M + D ++ + +I + + G+
Sbjct: 254 YFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKK----DKLVYDAMIACYTQNGK 309
Query: 283 LEKAFEMRAEMVERG--ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAY 340
+ A ++ A+M+ER I P+ T S ++ S + + G+ +
Sbjct: 310 PKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLS 369
Query: 341 FNLVGAYCLVGEFSKAFHLRDEMIHKG-----------------------FLPDFVTEFS 377
+L+ Y G+F+KAF + + K F +
Sbjct: 370 TSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIP 429
Query: 378 PSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFEL 437
P++VT+ L+ G V+E M + +L P Y I++ + G L +A+EL
Sbjct: 430 PNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYEL 489
Query: 438 M--VEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEV 481
+ + M G+ G L L GL + V + + ++C + E
Sbjct: 490 IKSMPMQPNAGVWGALL-----LASGLHNNVEFGEIACSHCVKLET 530
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/451 (18%), Positives = 185/451 (41%), Gaps = 71/451 (15%)
Query: 129 SFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQ 188
S+ ++ L R+ KE ++ +M++ G+ P S +++ A K N+V ++ Q
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMV-DGKPIHAQ 129
Query: 189 MKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDR 247
+ + T L+ L ++ A K F ++ E + V++N L+H Y
Sbjct: 130 ALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIA----EKNTVSWNSLLHGYLESGE 185
Query: 248 VQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSK 307
+ +A +F +P++ DAV N +I+ + K G++ A + + M L + +++
Sbjct: 186 LDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMP----LKSPASWNI 237
Query: 308 LIDCLCPQRRLSEAFDLFREMLGGGLSPRE--YAYFNLVGAYCLVGEFSKAFHL------ 359
LI R + A F M P++ ++ ++ Y +G+ A L
Sbjct: 238 LIGGYVNCREMKLARTYFDAM------PQKNGVSWITMISGYTKLGDVQSAEELFRLMSK 291
Query: 360 RDEMIHKGFLPDFV-------------------TEFSPSLVTYNALIYGNCLLGRVEEAL 400
+D++++ + + + P +T ++++ N LG
Sbjct: 292 KDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGT 351
Query: 401 GILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG-----------GIRG 449
+ + E + DD+ +I + K G+ KAF++ +++ GI G
Sbjct: 352 WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGING 411
Query: 450 VDL---AVFSSLM--KGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYI 504
+ ++F++++ K + V + +++AY G V + + M+ H ++ Y
Sbjct: 412 MATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYG 471
Query: 505 MLFDGFDKKARTRGAKESLLRMFYDLCTSLP 535
++ D + R A Y+L S+P
Sbjct: 472 IMVDMLGRAGRLEEA--------YELIKSMP 494
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 122 AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIR 181
++ + VSFN I C + A ++EM GL PD VTY TLI+A+ K+ VI
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVI- 230
Query: 182 AIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYK---VFTEMIASGFEPSLVTYNEL 238
L++ M + TT+ I L N +A+ + M EP +TYN +
Sbjct: 231 GNGLWNLMVLKGCKPNLTTFNVRIQFLV--NRRRAWDANDLLLLMPKLQVEPDSITYNMV 288
Query: 239 IHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGI 298
I + A ++ M +G P+ I T+I + CK G + A+ M + + +
Sbjct: 289 IKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKW 348
Query: 299 LPNADTYSKLIDCLCPQRRLSEA 321
PN DT L+ L + +L +A
Sbjct: 349 YPNLDTVEMLLKGLVKKGQLDQA 371
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 39/227 (17%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV---EPNVVSFNTV 133
D AY + EM SG P V TY L+ A + +R G+ M + +PN+ +FN
Sbjct: 194 DGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVR 253
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
I L +RR +A +LL M + PDS+TY N+VI+ L R
Sbjct: 254 IQFLVNRRRAWDANDLLLLMPKLQVEPDSITY-----------NMVIKGFFL------AR 296
Query: 194 IPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
P D A +V+T M G++P+L Y +IH C A
Sbjct: 297 FP------------------DMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYT 338
Query: 254 IFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILP 300
+ + + P+ L+ K G+L++A + E+V R + P
Sbjct: 339 MCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSI-MELVHRRVPP 384
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 8/212 (3%)
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
G + V++N I ++C + A R M GLTPD V TLI+ K+
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ MV +G PN T++ I L +RR +A DL M + P Y ++
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGM 406
+ L A + M KG + P+L Y +I+ C G + A + +
Sbjct: 292 FFLARFPDMAERVYTAMHGKG--------YKPNLKIYQTMIHYLCKAGNFDLAYTMCKDC 343
Query: 407 AEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
P+ + +++ G K G+L +A +M
Sbjct: 344 MRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM 375
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 151/364 (41%), Gaps = 76/364 (20%)
Query: 99 NVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAK-RRIKEAEELLQEMNSKG 157
N ++ R +D A+ + GM + N +++N+++ G+ R+ EA +L E+
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAK-NTITWNSLLIGISKDPSRMMEAHQLFDEIPE-- 121
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY----NV 213
PD+ +YN +++ +N N +A + +D+M P+ S ++ Y +
Sbjct: 122 --PDTFSYNIMLSCYVRNVNFE-KAQSFFDRM-------PFKDAASWNTMITGYARRGEM 171
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
+KA ++F M+ E + V++N +I Y ++ A F+ P RG+ V +
Sbjct: 172 EKARELFYSMM----EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAM 223
Query: 274 ITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGL 333
IT + K ++E A M +M + N T++ +I R + LFR ML G+
Sbjct: 224 ITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 334 SPRE-----------------------------------YAYFNLVGAYCLVGEFSKAFH 358
P A +L+ YC GE A+
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 359 LRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
L + M K +V +NA+I G G ++AL + R M + + PD +++
Sbjct: 341 LFEVMKKK------------DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 419 NIVI 422
V+
Sbjct: 389 VAVL 392
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 147/349 (42%), Gaps = 58/349 (16%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
P +YN++L Y R+ ++A M + + S+NT+I G + +++A EL
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-DAASWNTMITGYARRGEMEKARELFYS 180
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN 212
M K + V++N +I+ + +L + + ++ R V WT + +
Sbjct: 181 MMEK----NEVSWNAMISGYIECGDL--EKASHFFKVAPVRGVVAWTAM--ITGYMKAKK 232
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPD------ 266
V+ A +F +M + +LVT+N +I Y R +D + +FR M + G+ P+
Sbjct: 233 VELAEAMFKDMTVN---KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 267 -----------------------AVICN------TLITFFCKYGELEKAFEMRAEMVERG 297
+ +CN +LI+ +CK GEL A+++ M ++
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349
Query: 298 ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAF 357
++ ++ +I +A LFREM+ + P + ++ A G +
Sbjct: 350 VV----AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGM 405
Query: 358 HLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGM 406
+ M+ D+ E P T + G G++EEAL ++R M
Sbjct: 406 AYFESMVR-----DYKVEPQPDHYTCMVDLLGRA--GKLEEALKLIRSM 447
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 10/254 (3%)
Query: 95 VATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMN 154
V + ++ Y + K+V+ A + + M V N+V++N +I G R ++ +L + M
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML 276
Query: 155 SKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NV 213
+G+ P+S ++ + S+ + L + ++ + + + T TSLI + C +
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQL-GRQIHQIVSKSTLCNDVTALTSLISMYCKCGEL 335
Query: 214 DKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTL 273
A+K+F M + +V +N +I Y A+ +FR M D + PD + +
Sbjct: 336 GDAWKLFEVMK----KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 391
Query: 274 ITFFCKYGELEKAFEMRAEMV-ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
+ G + MV + + P D Y+ ++D L +L EA L R M
Sbjct: 392 LLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM---P 448
Query: 333 LSPREYAYFNLVGA 346
P + L+GA
Sbjct: 449 FRPHAAVFGTLLGA 462
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 138/351 (39%), Gaps = 81/351 (23%)
Query: 159 APDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYK 218
A +++T+N+L+ +SK+ + ++ A L+D+ IP
Sbjct: 89 AKNTITWNSLLIGISKDPSRMMEAHQLFDE-----IP----------------------- 120
Query: 219 VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFC 278
EP +YN ++ Y + A F MP + DA NT+IT +
Sbjct: 121 ----------EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYA 166
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
+ GE+EKA E+ M+E+ + S I+C L +A F+ G+
Sbjct: 167 RRGEMEKARELFYSMMEKNEVSWNAMISGYIEC----GDLEKASHFFKVAPVRGV----V 218
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEE 398
A+ ++ Y + A + +M + +LVT+NA+I G R E+
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMT-----------VNKNLVTWNAMISGYVENSRPED 267
Query: 399 ALGILRGMAEMSLSPDDVSYNIVISGFCKLG--ELGK----------------AFELMVE 440
L + R M E + P+ + + G +L +LG+ A ++
Sbjct: 268 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS 327
Query: 441 MDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEM 491
M G G +F + K D V +N++I+ Y G KAL L EM
Sbjct: 328 MYCKCGELGDAWKLFEVMKK--KDVVAWNAMISGYAQHGNADKALCLFREM 376
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 143/637 (22%), Positives = 238/637 (37%), Gaps = 100/637 (15%)
Query: 79 AYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVID 135
A +V S + N PSV ++ V+L Y + A+ I + M VE N + +VI
Sbjct: 304 AMEVFSRIPN----PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVIS 359
Query: 136 GLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
+ EA ++ + G DS LI+ SK+ ++ + D QR
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 196 VPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIF 255
+ TS + KA ++FT M+ G + L+ C + + G
Sbjct: 420 IVNVMITSFSQ---SKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGY- 475
Query: 256 RGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT--YSKLIDCLC 313
GL D + ++L T + K G LE+++++ +GI P D ++ +I
Sbjct: 476 --TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLF-----QGI-PFKDNACWASMISGFN 527
Query: 314 PQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
L EA LF EML G SP E ++ + + + G D
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGI--DKG 585
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
+ +LV +Y C G ++ A + + E+ D VS + +ISG+ + G +
Sbjct: 586 MDLGSALVN----MYSKC--GSLKLARQVYDRLPEL----DPVSCSSLISGYSQHGLIQD 635
Query: 434 AFELMVEMDEAGGIRGVDLAVFSSLMKG--LSDEVNYNSVINAY------CAEGEVSKAL 485
F L +M +G +D SS++K LSDE + + ++AY C E V +L
Sbjct: 636 GFLLFRDMVMSGFT--MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSL 693
Query: 486 ILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIEN 545
+ +Y F D D C + LI
Sbjct: 694 L--------------TMYSK-FGSID-----------------DCCKAFSQINGPDLI-- 719
Query: 546 CSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKA 605
+ L + G NEA V N + + +KPD + ++ V+++
Sbjct: 720 -------AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEES 772
Query: 606 YNMYMEMVH-YGFASHMFSVLALIKALFHVGRHNEVRRVIQN------------VLRSCN 652
Y MV YG + ++ AL GR E I N +L +C
Sbjct: 773 YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACK 832
Query: 653 ING-FELHKALSETGVIVREDKVKDV--LLNVLAEIA 686
I+G EL K ++ + + L N+LAE+
Sbjct: 833 IHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVG 869
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 155/372 (41%), Gaps = 22/372 (5%)
Query: 64 SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAV 123
SL+ +L C L +V + SG + + + L Y + ++E+ + +G+
Sbjct: 458 SLLSVLDCLNLGK----QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
+ N + ++I G ++EA L EM G +PD T ++T S + +L R
Sbjct: 514 KDNAC-WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLP-RGK 571
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
++ + I ++L+++ Y+ + K+ ++ E V+ + LI Y
Sbjct: 572 EIHGYTLRAGIDKGMDLGSALVNM---YSKCGSLKLARQVYDRLPELDPVSCSSLISGYS 628
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
+QD +FR M G T D+ ++++ E ++ A + + G+
Sbjct: 629 QHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPS 688
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
S L+ + + F ++ G P A+ L+ +Y G+ ++A + + M
Sbjct: 689 VGSSLLTMYSKFGSIDDCCKAFSQING----PDLIAWTALIASYAQHGKANEALQVYNLM 744
Query: 364 IHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMA-EMSLSPDDVSYNIVI 422
KGF PD VT +A +G G VEE+ L M + + P++ Y ++
Sbjct: 745 KEKGFKPDKVTFVG----VLSACSHG----GLVEESYFHLNSMVKDYGIEPENRHYVCMV 796
Query: 423 SGFCKLGELGKA 434
+ G L +A
Sbjct: 797 DALGRSGRLREA 808
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 142/358 (39%), Gaps = 59/358 (16%)
Query: 86 MVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKE 145
+V GFL L+ AY + + +A+ + + + NVVS+ +I G +E
Sbjct: 321 VVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI 205
A +L EM KG+ P+ TY+ ++TA+
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALP-------------------------------- 408
Query: 206 HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
V +V +++ + +E S L+ AY +V++A +F G+ D+
Sbjct: 409 -------VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK---- 457
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLID-CLCPQRRLSEAFDL 324
D V + ++ + + GE E A +M E+ + GI PN T+S +++ C + +
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF 517
Query: 325 FREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
+ L L+ Y G A + F + LV++N
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV------------FKRQREKDLVSWN 565
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG---ELGKAFELMV 439
++I G G+ +AL + + M + + D V++ V + G E K F++MV
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 195/494 (39%), Gaps = 84/494 (17%)
Query: 71 CDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSF 130
CD+L + + + GFL V+ L+ Y + + + M E NVV++
Sbjct: 107 CDELFGRQLH---CQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK-ERNVVTW 162
Query: 131 NTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKN----TNLVIRAIALY 186
T+I G E L M ++G P+S T+ + +++ L + + +
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 187 DQMKQQRIPVPWTTYTSLIHL-LCTYNVDKAYKVF--TEMIASGFEPSLVTYNELIHAYC 243
+ + + IPV SLI+L L NV KA +F TE+ S+VT+N +I Y
Sbjct: 223 NGL-DKTIPVS----NSLINLYLKCGNVRKARILFDKTEV------KSVVTWNSMISGYA 271
Query: 244 CRDRVQDAMGIFRGM-------PDRGLTPDAVICNTLITF---------FCKYGELEKAF 287
+A+G+F M + +C L KYG L
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 288 EMRAEMV----------------ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
A MV E G + N +++ +I EA DLF EM
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
G+ P E+ Y ++ A ++ +H + T + S AL+
Sbjct: 392 GVRPNEFTYSVILTALPVISP---------SEVHAQVVK---TNYERSSTVGTALLDAYV 439
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
LG+VEEA + G+ + D V+++ +++G+ + GE A ++ E+ + GGI+ +
Sbjct: 440 KLGKVEEAAKVFSGIDD----KDIVAWSAMLAGYAQTGETEAAIKMFGELTK-GGIKPNE 494
Query: 452 LAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFD 511
FSS++ N + NA +G+ + ++ + +++L + +
Sbjct: 495 F-TFSSIL-------NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM-----YA 541
Query: 512 KKARTRGAKESLLR 525
KK A+E R
Sbjct: 542 KKGNIESAEEVFKR 555
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 158/398 (39%), Gaps = 71/398 (17%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVI 134
+A KV M + V T + LL AY R ++E + IL M +E N+VS+N ++
Sbjct: 169 DARKVFDRMSDK----DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGIL 224
Query: 135 DGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRI 194
G KEA + Q+++ G PD VT ++++ ++ + L
Sbjct: 225 SGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML---------------- 268
Query: 195 PVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
LIH Y +I G + +I Y V + +
Sbjct: 269 -----NMGRLIH---------GY-----VIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
F +A +CN IT + G ++KA EM E+ + N +++ +I
Sbjct: 310 FNQFE----MMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 315 QRRLSEAFDLFREMLGGGLSPREYAYFNLV---GAYCLVGE------FSKAFHLRDEMIH 365
+ EA +LFREM G+ P +++ G +G F+ HL D +H
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN-VH 424
Query: 366 KGF-------------LPDFVTEFSPS--LVTYNALIYGNCLLGRVEEALGILRGMAEMS 410
G L V P+ LV +N+L+ G + G+ +E + I +
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 411 LSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIR 448
L PD +S+ ++S ++G + ++ M E GI+
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 33/270 (12%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMG---ILRGMAVEPNVVSFN 131
++ + Y ++S + N + N + R+ VD+A+ + + +E NVVS+
Sbjct: 299 KSGHVYGIIS-LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
++I G + EA EL +EM G+ P+ VT +++ A IA +
Sbjct: 358 SIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN--------IAALGHGRS 409
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDKAY--------KVFTEMIASGFEPS--LVTYNELIHA 241
+ +HLL +V A ++ I P+ LV +N L++
Sbjct: 410 TH------GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNG 463
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYG---ELEKAFEMRAEMVERGI 298
+ + ++ M IF + L PD + +L++ + G E K F+M +E E GI
Sbjct: 464 FSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE--EYGI 521
Query: 299 LPNADTYSKLIDCLCPQRRLSEAFDLFREM 328
P + YS +++ L +L EA+DL +EM
Sbjct: 522 KPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 107/553 (19%), Positives = 204/553 (36%), Gaps = 108/553 (19%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
+P + SF+++I L + ++ + M S GL PDS L ++
Sbjct: 78 DPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE--------- 128
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
L + V K ++ SG + + H Y
Sbjct: 129 ------------------------LSAFKVGK--QIHCVSCVSGLDMDAFVQGSMFHMYM 162
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
R+ DA +F M D+ D V C+ L+ + + G LE+ + +EM GI N
Sbjct: 163 RCGRMGDARKVFDRMSDK----DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIV 218
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
+++ ++ EA +F+++ G P + +++ + + + +
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278
Query: 364 IHKGFLPD------FVTEFSPSLVTY-----------------NALIYGNCLLGRVEEAL 400
I +G L D + + S Y NA I G G V++AL
Sbjct: 279 IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338
Query: 401 GILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMK 460
+ E ++ + VS+ +I+G + G+ +A EL EM AG
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG--------------- 383
Query: 461 GLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIM-----LFDGFDKKAR 515
+ N+ ++ + A G + A + H H ++R +L + L D + K R
Sbjct: 384 ---VKPNHVTIPSMLPACGNI--AALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 516 TRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLN 575
+L ++ +++ +PT L+ C N+ L GF M G E S+
Sbjct: 439 I-----NLSQIVFNM---MPT---KNLV--CWNS-------LMNGFSMHGKAKEVMSIFE 478
Query: 576 TVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMV-HYGFASHMFSVLALIKALFHV 634
++++ KPD + L+ + D+ + + M YG + ++ L
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRA 538
Query: 635 GRHNEVRRVIQNV 647
G+ E +I+ +
Sbjct: 539 GKLQEAYDLIKEM 551
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 159/400 (39%), Gaps = 69/400 (17%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEM 153
+V ++N L+ Y +++ + EA + M E NVVS+ ++ G + + EAE L M
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMP-ERNVVSWTAMVKGYMQEGMVGEAESLFWRM 136
Query: 154 NSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN- 212
+ +V + LI + + +A LYD M + + T++I LC
Sbjct: 137 PERNEVSWTVMFGGLI-----DDGRIDKARKLYDMMPVKDV----VASTNMIGGLCREGR 187
Query: 213 VDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDR----------- 261
VD+A +F EM E ++VT+ +I Y +RV A +F MP++
Sbjct: 188 VDEARLIFDEM----RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLG 243
Query: 262 ----GLTPDA------------VICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTY 305
G DA + CN +I F + GE+ KA + M +R NA T+
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDR---DNA-TW 299
Query: 306 SKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIH 365
+I + EA DLF +M G+ P + +++ + + ++
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Query: 366 KGFLPD-----------------------FVTEFSPSLVTYNALIYGNCLLGRVEEALGI 402
F D F S ++ +N++I G G EEAL I
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKI 419
Query: 403 LRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMD 442
M P+ V+ +++ G+L + E+ M+
Sbjct: 420 FHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESME 459
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 150/344 (43%), Gaps = 33/344 (9%)
Query: 128 VSFNTVIDGLCAKR-RIKEAEELLQEMNSKGLAPDSVTYNTLITA----MSKNTNLVIRA 182
+S V+ G CA+ +E+ + +EM GL D+ +L+ A + + +I
Sbjct: 82 ISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHC 141
Query: 183 IALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHA 241
+ L + V +SLI + + V A KVF+++ E LV +N +I
Sbjct: 142 LVLKFSYESDAFIV-----SSLIDMYSKFGEVGNARKVFSDL----GEQDLVVFNAMISG 192
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
Y + +A+ + + M G+ PD + N LI+ F EK E+ M G P+
Sbjct: 193 YANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPD 252
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRD 361
+++ +I L + +AFD F++ML GL P L+ A + A+
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL-----AYMKHG 307
Query: 362 EMIHKGFLPDFVTEFSPSLVTYNALI--YGNCLLGRVEEALGILRGMAEMSLSPDDVSYN 419
+ IH G+ VT +AL+ YG C G + EA+ + R + + V++N
Sbjct: 308 KEIH-GY--SVVTGLEDHGFVRSALLDMYGKC--GFISEAMILFRKTPKKT----TVTFN 358
Query: 420 IVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLS 463
+I + G KA EL +M+ G +D F++++ S
Sbjct: 359 SMIFCYANHGLADKAVELFDQMEATG--EKLDHLTFTAILTACS 400
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 21/240 (8%)
Query: 101 LLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAP 160
L+ Y + V A + + E ++V FN +I G + EA L+++M G+ P
Sbjct: 158 LIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKP 216
Query: 161 DSVTYNTLITAMS--KNTNLVIRAIALYDQMKQQRIPVPWTTYTS-LIHLLCTYNVDKAY 217
D +T+N LI+ S +N V + L + V WT+ S L+H + +KA+
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVH---NFQNEKAF 273
Query: 218 KVFTEMIASGFEPSLVTYNELIH-----AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNT 272
F +M+ G P+ T L+ AY + + G+ D G A
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSA----- 328
Query: 273 LITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
L+ + K G + +A + + ++ + T++ +I C +A +LF +M G
Sbjct: 329 LLDMYGKCGFISEAMILFRKTPKKTTV----TFNSMIFCYANHGLADKAVELFDQMEATG 384
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 134/332 (40%), Gaps = 61/332 (18%)
Query: 75 QNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVE---PNVVSFN 131
Q D A ++ +M G P V T+N L+ + + ++ IL M ++ P+VVS+
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWT 257
Query: 132 TVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQ 191
++I GL + ++A + ++M + GL P+S T TL+ A +
Sbjct: 258 SIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT------------------ 299
Query: 192 QRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDA 251
+ + + IH Y V T + GF S L+ Y + +A
Sbjct: 300 ---TLAYMKHGKEIH---------GYSVVTGLEDHGFVRS-----ALLDMYGKCGFISEA 342
Query: 252 MGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDC 311
M +FR P + V N++I + +G +KA E+ +M G + T++ ++
Sbjct: 343 MILFRKTPKK----TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTA 398
Query: 312 LCPQRRLSE-AFDLFREMLGG-GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFL 369
C L++ +LF M + PR Y +V G+ +A+ + M
Sbjct: 399 -CSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM------ 451
Query: 370 PDFVTEFSPSLVTYNALI-----YGNCLLGRV 396
P L + AL+ +GN L R+
Sbjct: 452 -----RMEPDLFVWGALLAACRNHGNMELARI 478
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 187/455 (41%), Gaps = 71/455 (15%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLA-PDSVTYNTLITAMSKNTNLVIRA 182
EP+ FNT++ G + + EM KG PDS ++ +I A+ +N +
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAV-ENFRSLRTG 125
Query: 183 IALYDQMKQQRIPVPWTTYTSLIHLLCTYN-VDKAYKVFTEMIASGFEPSLVTYNELIHA 241
++ Q + + T+LI + V+ A KVF EM +P+LV +N +I A
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM----HQPNLVAWNAVITA 181
Query: 242 YCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN 301
+ V A IF D+ L + N ++ + K GELE A + +EM R +
Sbjct: 182 CFRGNDVAGAREIF----DKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV-- 235
Query: 302 ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVG--EFSKAFHL 359
++S +I + +E+F FRE+ G+SP E + ++ A G EF K H
Sbjct: 236 --SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILH- 292
Query: 360 RDEMIHKGFLPDFVTEFSPSLVTYNALI--YGNCLLGRVEEALGILRGMAEMSLSPDDVS 417
GF+ +S + NALI Y C G V A + GM E VS
Sbjct: 293 -------GFVEK--AGYSWIVSVNNALIDMYSRC--GNVPMARLVFEGMQEKRCI---VS 338
Query: 418 YNIVISGFCKLGELGKAFELMVEMDEAG----GIRGVDLAVFSSLMKGLSDEVNYNSVIN 473
+ +I+G G+ +A L EM G GI + L S + + +Y S
Sbjct: 339 WTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFS--- 395
Query: 474 AYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTS 533
E+ + + E+EH+G + D + + + + A YD
Sbjct: 396 ------EMKRVYHIEPEIEHYGC---------MVDLYGRSGKLQKA--------YDFICQ 432
Query: 534 LP----TFTYDTLIENCSNNEFKSVVELAKGFGMR 564
+P + TL+ CS++ +ELA+ R
Sbjct: 433 MPIPPTAIVWRTLLGACSSH---GNIELAEQVKQR 464
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 164/396 (41%), Gaps = 54/396 (13%)
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG-ILPNA 302
C + DA+ R + PDA + NTL+ + + E + + EM+ +G + P++
Sbjct: 47 CAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDS 106
Query: 303 DTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE 362
+++ +I + R L F + + L GL + L+G Y G A + DE
Sbjct: 107 FSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDE 166
Query: 363 MIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGR-VEEALGILRGMAEMSLSPDDVSYNIV 421
M P+LV +NA+I C G V A I M L + S+N++
Sbjct: 167 M------------HQPNLVAWNAVITA-CFRGNDVAGAREIFDKM----LVRNHTSWNVM 209
Query: 422 ISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEV 481
++G+ K GEL A + EM D +S+++ G++ ++N ++ E+
Sbjct: 210 LAGYIKAGELESAKRIFSEMPHR------DDVSWSTMIVGIAHNGSFN---ESFLYFREL 260
Query: 482 SKALILHDEMEHHGSLRA-----SVLYIMLFDGFDKKA---RTRGAKESLLRMFYDLCTS 533
+A + +E+ G L A S + + GF +KA +L+ M Y C +
Sbjct: 261 QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDM-YSRCGN 319
Query: 534 LPT--FTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNF 591
+P ++ + E + S++ G M G EA + N + + PDG +
Sbjct: 320 VPMARLVFEGMQEKRCIVSWTSMI---AGLAMHGQGEEAVRLFNEMTAYGVTPDGISFIS 376
Query: 592 LIVEHCRR-----------RNVDKAYNMYMEMVHYG 616
L+ C + + Y++ E+ HYG
Sbjct: 377 LL-HACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYG 411
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 104/246 (42%), Gaps = 39/246 (15%)
Query: 52 EMNRKGLDPARESLIHLL-CCDQLQNDNAYKVLSEMV-NSGFLPSVATYNVLLHAYCRDK 109
E+ R G+ P SL +L C Q + K+L V +G+ V+ N L+ Y R
Sbjct: 259 ELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCG 318
Query: 110 RVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLI 169
V A + GM + +VS+ ++I GL + +EA L EM + G+ PD +++ +L+
Sbjct: 319 NVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLL 378
Query: 170 TAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFE 229
A S + L+ + +MK+ Y++ E
Sbjct: 379 HACS-HAGLIEEGEDYFSEMKR------------------VYHI---------------E 404
Query: 230 PSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
P + Y ++ Y ++Q A MP + P A++ TL+ +G +E A ++
Sbjct: 405 PEIEHYGCMVDLYGRSGKLQKAYDFICQMP---IPPTAIVWRTLLGACSSHGNIELAEQV 461
Query: 290 RAEMVE 295
+ + E
Sbjct: 462 KQRLNE 467
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 149/374 (39%), Gaps = 46/374 (12%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAE-ELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRA 182
EPN SFN +I GL EA L + M GL PD TYN + A +K +
Sbjct: 93 EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAK-----LEE 147
Query: 183 IALYDQMKQQRIPVPWTTYTSLIH-LLCTY----NVDKAYKVFTEMIASGFEPSLVTYNE 237
I + + V + H L+ Y V A K+F E+ E V++N
Sbjct: 148 IGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEIT----ERDTVSWNS 203
Query: 238 LIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERG 297
+I Y +DAM +FR M + G PD +++ G+L + + +
Sbjct: 204 MISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK 263
Query: 298 ILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAF 357
I + SKLI L A +F +M + A+ ++ Y G+ S+AF
Sbjct: 264 IGLSTFLGSKLISMYGKCGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAF 319
Query: 358 HLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVS 417
L EM G SP T + ++ +G +E I +E+SL +
Sbjct: 320 KLFFEMEKTG--------VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYV 371
Query: 418 YNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCA 477
++ + K G + +A L VF ++ + +E +N++I AY
Sbjct: 372 ATGLVDMYGKCGRVEEA-----------------LRVFEAM--PVKNEATWNAMITAYAH 412
Query: 478 EGEVSKALILHDEM 491
+G +AL+L D M
Sbjct: 413 QGHAKEALLLFDRM 426
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 159/392 (40%), Gaps = 29/392 (7%)
Query: 53 MNRKGLDPAR--ESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR 110
M GL P + + + + C + V S + G V + L+ Y + +
Sbjct: 123 MKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQ 182
Query: 111 VDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLIT 170
V A + + E + VS+N++I G K+A +L ++M +G PD T +++
Sbjct: 183 VGYARKLFDEI-TERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLG 241
Query: 171 AMSKNTNLVIRAIALYDQMK-QQRIPVPWTTYTSLIHLL--CTYNVDKAYKVFTEMIASG 227
A S +L R L ++M ++I + + LI + C ++D A +VF +MI
Sbjct: 242 ACSHLGDL--RTGRLLEEMAITKKIGLSTFLGSKLISMYGKCG-DLDSARRVFNQMI--- 295
Query: 228 FEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAF 287
+ V + +I Y + +A +F M G++PDA +T+++ G LE
Sbjct: 296 -KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 354
Query: 288 EMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAY 347
++ E + N + L+D R+ EA +F M E + ++ AY
Sbjct: 355 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM----PVKNEATWNAMITAY 410
Query: 348 CLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMA 407
G +A L D M PS +T+ ++ G V + M+
Sbjct: 411 AHQGHAKEALLLFDRM-----------SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMS 459
Query: 408 EM-SLSPDDVSYNIVISGFCKLGELGKAFELM 438
M L P Y +I + G L +A+E M
Sbjct: 460 SMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFM 491
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 162/413 (39%), Gaps = 81/413 (19%)
Query: 86 MVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKE 145
+V +G V NVL+ Y + ++D+AM + E + VS+N++I G R+
Sbjct: 174 VVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF-DRCDERDQVSWNSLISGYV---RVGA 229
Query: 146 AEE---LLQEMNSKGLAPDSVTYNTLITAMSKNTN--LVIRAIALYDQMKQQRIPVPWTT 200
AEE LL +M+ GL + +++ A N N + + +A++ + +
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV 289
Query: 201 YTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQD-----AMGI 254
T+L+ + ++ +A K+F+ M + ++VTYN +I + D + D A +
Sbjct: 290 RTALLDMYAKNGSLKEAIKLFSLMPS----KNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 255 FRGMPDRGLTPD------------------------AVIC-----------NTLITFFCK 279
F M RGL P A+IC + LI +
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 280 YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYA 339
G E + A ++ I +++ +IDC +L AFDLFR++ + P EY
Sbjct: 406 MGSTEDGMQCFASTSKQDIA----SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEMIHKGF-------------------LP----DFVTEF 376
++ A S ++ I G +P F+
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521
Query: 377 SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG 429
+P + TY+A+I G EAL I M + P+ ++ V+ C G
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 117/579 (20%), Positives = 219/579 (37%), Gaps = 96/579 (16%)
Query: 105 YCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
YC+ + + A + M E N++SFN++I G ++A EL E L D T
Sbjct: 92 YCKCRELGFARQLFDRMP-ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMI 224
Y + + +L + L+H L N
Sbjct: 151 YAGALGFCGERCDLDL---------------------GELLHGLVVVN------------ 177
Query: 225 ASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELE 284
G + N LI Y ++ AM +F DR D V N+LI+ + + G E
Sbjct: 178 --GLSQQVFLINVLIDMYSKCGKLDQAMSLF----DRCDERDQVSWNSLISGYVRVGAAE 231
Query: 285 KAFEMRAEMVERGILPNADTYS--KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
+ + A+M G+ N TY+ ++ C L+E F + + M + + F+
Sbjct: 232 EPLNLLAKMHRDGL--NLTTYALGSVLKACCIN--LNEGF-IEKGMAIHCYTAKLGMEFD 286
Query: 343 LVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRV-----E 397
+V L+ ++K L++ + +P S ++VTYNA+I G + +
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLMP------SKNVVTYNAMISGFLQMDEITDEASS 340
Query: 398 EALGILRGMAEMSLSPDDVSYNIVISG--FCKLGELGKAFELMV-----EMDEAGGIRGV 450
EA + M L P ++++V+ K E G+ ++ + DE G +
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 400
Query: 451 DL-AVFSSLMKGL--------SDEVNYNSVINAYCAEGEVSKALILHDEM-EHHGSLRAS 500
+L A+ S G+ D ++ S+I+ + ++ A L ++ H
Sbjct: 401 ELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEY 460
Query: 501 VLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKG 560
+ +M+ D A + G + + + + I+ ++ + S+ AK
Sbjct: 461 TVSLMMSACADFAALSSGEQ-------------IQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 561 FGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASH 620
M + N V PD A Y+ +I + + ++A N++ M +G +
Sbjct: 508 GNM--------PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPN 559
Query: 621 MFSVLALIKALFHVGRHNEVRRVIQNVLRSCNINGFELH 659
+ L ++ A H G + + Q + IN E H
Sbjct: 560 QQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKH 598
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 165/410 (40%), Gaps = 75/410 (18%)
Query: 45 KTTTTVSEMNRKGLDPARESLIHLL-CCDQLQ-NDNAYKVLSEMVNSGFLPSVATYN--V 100
KT + +EM ++G+ P R + +L C +L+ N + ++V GF+ + N +
Sbjct: 95 KTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALI 154
Query: 101 LLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
L HA C D +GI + + + + V+++++ G + +I EA L EM K
Sbjct: 155 LFHANCGD------LGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK- 207
Query: 158 LAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAY 217
D V +N +IT L C +D A
Sbjct: 208 ---DQVAWNVMITGC----------------------------------LKCK-EMDSAR 229
Query: 218 KVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFF 277
++F E +VT+N +I Y ++A+GIF+ M D G PD V +L++
Sbjct: 230 ELFDRFT----EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
Query: 278 CKYGELEKA-----FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGG 332
G+LE + + V I ++ LID + A ++FR G
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFR-----G 340
Query: 333 LSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCL 392
+ R+ + +N + + + + +EM + P+ VT+ +I
Sbjct: 341 VKDRDLSTWNTLIVGLALHHAEGSIEMFEEMQR--------LKVWPNEVTFIGVILACSH 392
Query: 393 LGRVEEALGILRGMAEM-SLSPDDVSYNIVISGFCKLGELGKAFELMVEM 441
GRV+E M +M ++ P+ Y ++ + G+L +AF + M
Sbjct: 393 SGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM 442
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 135/320 (42%), Gaps = 24/320 (7%)
Query: 124 EPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAI 183
+P+V N V+ G + ++ L EM +G++PD T+ ++ A SK L R+
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK---LEWRSN 130
Query: 184 ALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYC 243
K R Y +L N + +E+ + V ++ + Y
Sbjct: 131 GFAFHGKVVRHGFVLNEYVKNALILFHANCGD-LGIASELFDDSAKAHKVAWSSMTSGYA 189
Query: 244 CRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNAD 303
R ++ +AM +F MP + D V N +IT K E++ A E+ E+ ++
Sbjct: 190 KRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNA 245
Query: 304 TYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEM 363
S ++C P+ EA +F+EM G P +L+ A ++G+ L +
Sbjct: 246 MISGYVNCGYPK----EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 364 IHKGFLPDFVTEFSPSLVTYNALI--YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIV 421
+ + + +P +NALI Y C G ++ A+ + RG+ + LS ++N +
Sbjct: 302 LETASVSSSIYVGTP---IWNALIDMYAKC--GSIDRAIEVFRGVKDRDLS----TWNTL 352
Query: 422 ISGFCKLGELGKAFELMVEM 441
I G L + E+ EM
Sbjct: 353 IVGLA-LHHAEGSIEMFEEM 371
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 119/311 (38%), Gaps = 50/311 (16%)
Query: 187 DQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRD 246
D+ +R P W C N+ ++ M+ +G +L ELI Y
Sbjct: 8 DRTTNRRRPKLWQN--------CK-NIRTLKQIHASMVVNGLMSNLSVVGELI--YSASL 56
Query: 247 RVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYS 306
V A+ + D PD ICN ++ + + EK + EM +RG+ P+ T++
Sbjct: 57 SVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFT 116
Query: 307 KLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDE--MI 364
++ S F +++ G EY L+ + G+ A L D+
Sbjct: 117 FVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKA 176
Query: 365 HKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
HK V ++++ G G+++EA+ + M D V++N++I+G
Sbjct: 177 HK--------------VAWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITG 218
Query: 425 FCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKA 484
K E+ A EL E D V +N++I+ Y G +A
Sbjct: 219 CLKCKEMDSARELFDRFTE-------------------KDVVTWNAMISGYVNCGYPKEA 259
Query: 485 LILHDEMEHHG 495
L + EM G
Sbjct: 260 LGIFKEMRDAG 270
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 156/382 (40%), Gaps = 32/382 (8%)
Query: 59 DPARESLIHLLC-------CDQLQ-NDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR 110
D AR I + C CD A +V ++ GF V N ++ Y +
Sbjct: 123 DAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDN 182
Query: 111 VDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS-KGLAPDSVTYNTLI 169
++ A + M+ E +VVS+N++I G ++ +++ + M + P+ VT ++
Sbjct: 183 IESARKVFDEMS-ERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 170 TAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGF 228
A ++++L+ + ++ +M + I + + ++I ++D A +F EM
Sbjct: 242 QACGQSSDLIF-GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS---- 296
Query: 229 EPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFE 288
E VTY +I Y V++AM +F M GL+ N +I+ + E+
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLST----WNAMISGLMQNNHHEEVIN 352
Query: 289 MRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYC 348
EM+ G PN T S L+ L L ++ + G Y +++ Y
Sbjct: 353 SFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYA 412
Query: 349 LVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAE 408
+G A + D + SL+ + A+I + G + A + M
Sbjct: 413 KLGFLLGAQRVFDNCKDR------------SLIAWTAIITAYAVHGDSDSACSLFDQMQC 460
Query: 409 MSLSPDDVSYNIVISGFCKLGE 430
+ PDDV+ V+S F G+
Sbjct: 461 LGTKPDDVTLTAVLSAFAHSGD 482
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/445 (20%), Positives = 170/445 (38%), Gaps = 72/445 (16%)
Query: 262 GLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEA 321
G D + N +IT++ K +E A ++ EM ER ++ +++ +I +
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVV----SWNSMISGYSQSGSFEDC 217
Query: 322 FDLFREMLG-GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
+++ ML P ++ A + + +MI D L
Sbjct: 218 KKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMD--------L 269
Query: 381 VTYNALI--YGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
NA+I Y C G ++ A + M+E D V+Y +ISG+ G + +A L
Sbjct: 270 SLCNAVIGFYAKC--GSLDYARALFDEMSE----KDSVTYGAIISGYMAHGLVKEAMALF 323
Query: 439 VEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLR 498
EM+ G L+ +++++ GL ++ VIN++ EM GS
Sbjct: 324 SEMESIG------LSTWNAMISGLMQNNHHEEVINSF-------------REMIRCGSRP 364
Query: 499 ASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELA 558
+V L + +G KE + F I N ++N +
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKE------------IHAFA----IRNGADNNIYVTTSII 408
Query: 559 KGFGMRGLKNEAASVLNTVLQWNYKPDGAV-YNFLIVEHCRRRNVDKAYNMYMEMVHYGF 617
+ G A V + N K + + +I + + D A +++ +M G
Sbjct: 409 DNYAKLGFLLGAQRVFD-----NCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGT 463
Query: 618 ASHMFSVLALIKALFHVGRHNEVRRVIQNVLRSCNIN-GFELHKALSETGVIVREDKVKD 676
++ A++ A H G + + + ++L +I G E + + V+ R K+ D
Sbjct: 464 KPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM--VSVLSRAGKLSD 521
Query: 677 VLLNVLAEIAMD------GLLLNGG 695
+ ++++ +D G LLNG
Sbjct: 522 A-MEFISKMPIDPIAKVWGALLNGA 545
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 165/401 (41%), Gaps = 69/401 (17%)
Query: 87 VNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEA 146
+ SG + + N L++ Y + + EA + M +E NV S+N VI +KEA
Sbjct: 15 IKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEM-LERNVYSWNAVIAAYVKFNNVKEA 73
Query: 147 EELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWT---TYTS 203
EL + N + D +TYNTL++ +K AI ++ +M ++ W T T+
Sbjct: 74 RELFESDNCE---RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 204 LIHLLCTY-NVDKAYKVFTEMIASG---------------------------FEPSLVTY 235
++ L NV ++ ++ +G F S V +
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 236 ------NELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEM 289
N +I AYC + A+ +F P+ D + NTLI + + G E+A +M
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPE---LNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL 349
M E G+ + ++ +++ L + L ++ +L G ++ +V YC
Sbjct: 248 AVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCK 307
Query: 350 VG--EFSKAFHL-------------------RDEMIHKGFLPDFVTEFSPSLVTYNALIY 388
G +++++ HL + +M+ L D ++E +LV + A+
Sbjct: 308 CGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSE--KNLVVWTAMFL 365
Query: 389 GNCLLGRVEEALGILRG-MAEMSLSPDDVSYNIVISGFCKL 428
G L + + L + R +A + +PD + + + G C L
Sbjct: 366 GYLNLRQPDSVLELARAFIANETNTPDSLVM-VSVLGACSL 405
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 152/390 (38%), Gaps = 58/390 (14%)
Query: 91 FLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELL 150
F+ SVA N ++ AYCR+ +D+A+ + + +S+NT+I G +EA ++
Sbjct: 190 FVDSVAR-NAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMA 248
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTT---------- 200
M GL D ++ ++ +S +L I +K + +
Sbjct: 249 VSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKC 308
Query: 201 ----YTSLIHLLCTY-NVDKAYKVFTEMIASG------------FEPSLVTYNELIHAYC 243
Y HLL + N+ A + + G E +LV + + Y
Sbjct: 309 GNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL 368
Query: 244 CRDRVQDAMGIFRG-MPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPN- 301
+ + + R + + TPD+++ +++ +E E+ + GIL +
Sbjct: 369 NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDK 428
Query: 302 ------ADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCL-VGEFS 354
D YSK + +R +F+ R+ +N + A C G +
Sbjct: 429 KLVTAFVDMYSKCGNVEYAERIFDSSFE------------RDTVMYNAMIAGCAHHGHEA 476
Query: 355 KAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEM-SLSP 413
K+F ++M GF PD +T+ AL+ G V E + M E ++SP
Sbjct: 477 KSFQHFEDMTEGGFKPD--------EITFMALLSACRHRGLVLEGEKYFKSMIEAYNISP 528
Query: 414 DDVSYNIVISGFCKLGELGKAFELMVEMDE 443
+ Y +I + K L KA ELM +D+
Sbjct: 529 ETGHYTCMIDLYGKAYRLDKAIELMEGIDQ 558
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 124/319 (38%), Gaps = 57/319 (17%)
Query: 125 PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIA 184
PNV+ FN +I E+ M S+G+ D TY L+ + S ++L
Sbjct: 65 PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDL------ 118
Query: 185 LYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCC 244
+ +H E+I +GF ++ Y
Sbjct: 119 ---------------RFGKCVH--------------GELIRTGFHRLGKIRIGVVELYTS 149
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
R+ DA +F M +R + V+ N +I FC G++E+ + +M ER I+ +
Sbjct: 150 GGRMGDAQKVFDEMSER----NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIV----S 201
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMI 364
++ +I L R EA +LF EM+ G P E ++ +G +
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 365 HKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISG 424
G DF+T NAL+ C G +E A I R M ++ VS+N +ISG
Sbjct: 262 SSGLFKDFIT-------VGNALVDFYCKSGDLEAATAIFRKMQRRNV----VSWNTLISG 310
Query: 425 FC--KLGELG-KAFELMVE 440
GE G F+ M+E
Sbjct: 311 SAVNGKGEFGIDLFDAMIE 329
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 24/260 (9%)
Query: 78 NAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGL 137
+A KV EM +V +N+++ +C V+ + + + M+ E ++VS+N++I L
Sbjct: 155 DAQKVFDEMSER----NVVVWNLMIRGFCDSGDVERGLHLFKQMS-ERSIVSWNSMISSL 209
Query: 138 CAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSK----NTNLVIRAIALYDQMKQQR 193
R +EA EL EM +G PD T T++ + +T I + A + +
Sbjct: 210 SKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDF 269
Query: 194 IPVPWTTYTSLIHLLC-TYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAM 252
I V +L+ C + +++ A +F +M ++V++N LI + + +
Sbjct: 270 ITVG----NALVDFYCKSGDLEAATAIFRKMQ----RRNVVSWNTLISGSAVNGKGEFGI 321
Query: 253 GIFRGMPDRG-LTP-DAVICNTLITFFCKY-GELEKAFEMRAEMVERGIL-PNADTYSKL 308
+F M + G + P +A L C Y G++E+ E+ M+ER L + Y +
Sbjct: 322 DLFDAMIEEGKVAPNEATFLGVLAC--CSYTGQVERGEELFGLMMERFKLEARTEHYGAM 379
Query: 309 IDCLCPQRRLSEAFDLFREM 328
+D + R++EAF + M
Sbjct: 380 VDLMSRSGRITEAFKFLKNM 399
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 110/282 (39%), Gaps = 36/282 (12%)
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
N D A +VF+ + P+++ +N +I Y +++ F M RG+ D
Sbjct: 51 NSDYANRVFSHIQ----NPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYA 106
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
L+ +L + E++ G +++ R+ +A +F EM
Sbjct: 107 PLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM--- 163
Query: 332 GLSPREYAYFNL-VGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
S R +NL + +C G+ + HL +M + S+V++N++I
Sbjct: 164 --SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER------------SIVSWNSMISSL 209
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGV 450
GR EAL + M + PD+ + V+ LG L + + +G
Sbjct: 210 SKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSG----- 264
Query: 451 DLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME 492
+F + N++++ YC G++ A + +M+
Sbjct: 265 ---LFKDFI------TVGNALVDFYCKSGDLEAATAIFRKMQ 297
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 175/419 (41%), Gaps = 54/419 (12%)
Query: 86 MVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKE 145
+V SG++ V + L+ Y + + ++ + M E +V S+NTVI ++
Sbjct: 133 VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVISCFYQSGEAEK 191
Query: 146 AEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLI 205
A EL M S G P+SV+ I+A S+ L R ++ + ++ + ++L+
Sbjct: 192 ALELFGRMESSGFEPNSVSLTVAISACSRLLWLE-RGKEIHRKCVKKGFELDEYVNSALV 250
Query: 206 HLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
+ Y +V E+ SLV +N +I Y + + + I M G P
Sbjct: 251 DM---YGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 266 DAVICNTLITFFCK-----YGELEKAFEMRAEMVERGILPNADTY--SKLIDCL--CPQR 316
+++ + +G+ + +R+ + NAD Y LID C +
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRS-------VVNADIYVNCSLIDLYFKCGEA 360
Query: 317 RLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEF 376
L+E + ++ ++ +Y VG + KA + D+M+ G PD
Sbjct: 361 NLAET------VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPD----- 409
Query: 377 SPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFE 436
+VT+ +++ L +E+ I ++E L D++ + ++ + K G +AF
Sbjct: 410 ---VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFR 466
Query: 437 LMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHG 495
+F+S+ K D V++ +I+AY + G+ +AL DEM+ G
Sbjct: 467 -----------------IFNSIPK--KDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 111/534 (20%), Positives = 199/534 (37%), Gaps = 79/534 (14%)
Query: 161 DSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYK-- 218
D +N+L++ SKN+ + + ++ ++ I VP ++T NV KAY
Sbjct: 70 DVYIWNSLMSGYSKNS-MFHDTLEVFKRLLNCSICVP-DSFT-------FPNVIKAYGAL 120
Query: 219 --------VFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVIC 270
+ T ++ SG+ +V + L+ Y + ++++ +F MP+R D
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER----DVASW 176
Query: 271 NTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLG 330
NT+I+ F + GE EKA E+ M G PN+ + + I L ++ R+ +
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 331 GGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGN 390
G EY LV Y A + +M K SLV +N++I G
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK------------SLVAWNSMIKGY 284
Query: 391 CLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGEL-------GKAFELMVEMDE 443
G + + IL M P + ++ + L G +V D
Sbjct: 285 VAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADI 344
Query: 444 AGGIRGVDL-----------AVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEME 492
+DL VFS K +++ ++N +I++Y + G KA+ ++D+M
Sbjct: 345 YVNCSLIDLYFKCGEANLAETVFSKTQKDVAE--SWNVMISSYISVGNWFKAVEVYDQMV 402
Query: 493 HHGSLRASVLYIMLFDGFDKKARTRGAKE------------------SLLRMFYDLCTSL 534
G V + + + A K+ +LL M+
Sbjct: 403 SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEK 462
Query: 535 PTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIV 594
F + + + S + +G G EA + + ++ KPDG V ++
Sbjct: 463 EAF---RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDG-VTLLAVL 518
Query: 595 EHCRRRN-VDKAYNMYMEM-VHYGFASHMFSVLALIKALFHVGRHNEVRRVIQN 646
C +D+ + +M YG + +I L GR E +IQ
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 170/425 (40%), Gaps = 52/425 (12%)
Query: 40 SGGLLKTTTTVSEMNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVAT 97
SG K M G +P SL + C L + ++ + V GF
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 98 YNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKG 157
+ L+ Y + ++ A + + M ++V++N++I G AK K E+L M +G
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 158 LAPDSVTYNTLITAMSKNTNL---------VIRAIALYDQMKQQRIPVPWTTYTSLIHLL 208
P T +++ A S++ NL VIR++ D I++
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD-----------------IYVN 347
Query: 209 CTYNVDKAYKV----FTEMIASGFEPSLV-TYNELIHAYCCRDRVQDAMGIFRGMPDRGL 263
C+ +D +K E + S + + ++N +I +Y A+ ++ M G+
Sbjct: 348 CSL-IDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV 406
Query: 264 TPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFD 323
PD V +++ + LEK ++ + E + + S L+D EAF
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFR 466
Query: 324 LFREMLGGGLSPRE--YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLV 381
+F + P++ ++ ++ AY G+ +A + DEM G PD VT
Sbjct: 467 IFNSI------PKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLL----- 515
Query: 382 TYNALIYGNCLLGRVEEALGILRGM-AEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
A++ G ++E L M ++ + P Y+ +I + G L +A+E++ +
Sbjct: 516 ---AVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Query: 441 MDEAG 445
E
Sbjct: 573 TPETS 577
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 196/493 (39%), Gaps = 148/493 (30%)
Query: 81 KVLSEMVNSGFLP------------SVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVV 128
K L++M+ SG++ + T+N ++ Y + + +++A + M + +VV
Sbjct: 45 KELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP-KRDVV 103
Query: 129 SFNTVIDGLCA---KRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIAL 185
++NT+I G + R ++EA +L EM S+ DS ++NT+I+ +KN + A+ L
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRR-IGEALLL 158
Query: 186 YDQMKQQRIPVPWTTYTSLIHLLCTY-NVDKAYKVFTEM--------------------- 223
+++M + R V W+ ++I C VD A +F +M
Sbjct: 159 FEKMPE-RNAVSWS---AMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERL 214
Query: 224 ------------IASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPD----------- 260
+ SG E + YN LI Y R +V+ A +F +PD
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 261 RGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE 320
+ V N++I + K G++ A + +M +R + +++ +ID R+ +
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI----SWNTMIDGYVHVSRMED 330
Query: 321 AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSL 380
AF LF EM P A+
Sbjct: 331 AFALFSEM------PNRDAH---------------------------------------- 344
Query: 381 VTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVE 440
++N ++ G +G VE A R E + VS+N +I+ + K + +A +L +
Sbjct: 345 -SWNMMVSGYASVGNVELA----RHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIR 399
Query: 441 MDEAGGIRGVDLAVFSSLMKGLSDEVN---------------------YNSVINAYCAEG 479
M+ G D +SL+ + VN +N++I Y G
Sbjct: 400 MNIEG--EKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCG 457
Query: 480 EVSKALILHDEME 492
E+ ++ + DEM+
Sbjct: 458 EIMESRRIFDEMK 470
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/433 (20%), Positives = 174/433 (40%), Gaps = 67/433 (15%)
Query: 97 TYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNS- 155
+++ ++ +C++ VD A+ + R M V+ + ++ GL R+ EA +L + S
Sbjct: 169 SWSAMITGFCQNGEVDSAVVLFRKMPVK-DSSPLCALVAGLIKNERLSEAAWVLGQYGSL 227
Query: 156 -KGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMK-----------QQRIPVPWTTYTS 203
G YNTLI + V A L+DQ+ ++R ++ S
Sbjct: 228 VSGREDLVYAYNTLIVGYGQRGQ-VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 204 LIH-LLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRG 262
+I L +V A +F +M + +++N +I Y R++DA +F MP+R
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR- 341
Query: 263 LTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAF 322
DA N +++ + G +E A + E+ + +++ +I + EA
Sbjct: 342 ---DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV----SWNSIIAAYEKNKDYKEAV 394
Query: 323 DLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPD------FVTEF 376
DLF M G P + +L+ A + + +++ K +PD +T +
Sbjct: 395 DLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMH-QIVVKTVIPDVPVHNALITMY 453
Query: 377 SP------------------SLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSY 418
S ++T+NA+I G G EAL + M + P +++
Sbjct: 454 SRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF 513
Query: 419 NIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAE 478
V++ G + +A V M S+ K +Y+S++N +
Sbjct: 514 VSVLNACAHAGLVDEAKAQFVSM--------------MSVYKIEPQMEHYSSLVNVTSGQ 559
Query: 479 GEVSKALILHDEM 491
G+ +A+ + M
Sbjct: 560 GQFEEAMYIITSM 572
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 53/300 (17%)
Query: 233 VTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE---LEKAFEM 289
VT+N +I Y R + A +F MP R D V NT+I+ + G LE+A ++
Sbjct: 72 VTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNTMISGYVSCGGIRFLEEARKL 127
Query: 290 RAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYA--YFNLVGAY 347
EM R ++ +++ +I RR+ EA LF +M P A + ++ +
Sbjct: 128 FDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKM------PERNAVSWSAMITGF 177
Query: 348 CLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMA 407
C GE A L +M P V + SP AL+ G R+ EA +L
Sbjct: 178 CQNGEVDSAVVLFRKM------P--VKDSSPLC----ALVAGLIKNERLSEAAWVLGQYG 225
Query: 408 EMSLSPDDV--SYNIVISGFCKLGELGKA---FELMVEM---DEAGGIRGVDLAVFSSLM 459
+ +D+ +YN +I G+ + G++ A F+ + ++ D G R
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE---------- 275
Query: 460 KGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGA 519
+ + V++NS+I AY G+V A +L D+M+ R ++ + + DG+ +R A
Sbjct: 276 RFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD----RDTISWNTMIDGYVHVSRMEDA 331
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 14/255 (5%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDG 136
++A+ + SEM N ++N+++ Y V+ A E + VS+N++I
Sbjct: 329 EDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTP-EKHTVSWNSIIAA 383
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP- 195
+ KEA +L MN +G PD T +L++A + NL + + ++ + + IP
Sbjct: 384 YEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRL-GMQMHQIVVKTVIPD 442
Query: 196 VPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
VP + +LI + + ++ ++F EM + ++T+N +I Y +A+ +
Sbjct: 443 VP--VHNALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMIGGYAFHGNASEALNL 497
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVE-RGILPNADTYSKLIDCLC 313
F M G+ P + +++ G +++A M+ I P + YS L++
Sbjct: 498 FGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTS 557
Query: 314 PQRRLSEAFDLFREM 328
Q + EA + M
Sbjct: 558 GQGQFEEAMYIITSM 572
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 38/223 (17%)
Query: 53 MNRKGLDPARESLIHLLCCDQ-LQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRV 111
MN +G P +L LL L N + ++V +P V +N L+ Y R +
Sbjct: 400 MNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEI 459
Query: 112 DEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITA 171
E+ I M ++ V+++N +I G EA L M S G+ P +T+ +++ A
Sbjct: 460 MESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNA 519
Query: 172 MSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPS 231
+ L D+ K Q + ++ Y + EP
Sbjct: 520 CAH--------AGLVDEAKAQ-----------FVSMMSVYKI---------------EPQ 545
Query: 232 LVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLI 274
+ Y+ L++ + + ++AM I MP PD + L+
Sbjct: 546 MEHYSSLVNVTSGQGQFEEAMYIITSMP---FEPDKTVWGALL 585
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 140/345 (40%), Gaps = 62/345 (17%)
Query: 137 LCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNT-----NLVIR---------- 181
LC +R + A + + + S GL DS TY+ LI N NL+ R
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 182 -------------------AIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTE 222
A L+DQM Q+ + + WTT S + C + KA ++
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV-ISWTTMIS-AYSKCKIH-QKALELLVL 152
Query: 223 MIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGE 282
M+ P++ TY+ ++ + C + + D + G+ GL D + + LI F K GE
Sbjct: 153 MLRDNVRPNVYTYSSVLRS-C--NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 283 LEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFN 342
E A + EMV +A ++ +I R A +LF+ M G + +
Sbjct: 210 PEDALSVFDEMVT----GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
Query: 343 LVGAYCLVG--EFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEAL 400
++ A + E H+ + ++ L+ NAL+ C G +E+AL
Sbjct: 266 VLRACTGLALLELGMQAHVH------------IVKYDQDLILNNALVDMYCKCGSLEDAL 313
Query: 401 GILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
+ M E D ++++ +ISG + G +A +L M +G
Sbjct: 314 RVFNQMKE----RDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 139/352 (39%), Gaps = 49/352 (13%)
Query: 212 NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICN 271
++ +A K + + G TY+ELI V + I R + G P + N
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 272 TLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGG 331
LI + K+ L A ++ +M +R ++ S C Q+ A +L ML
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQK----ALELLVLMLRD 156
Query: 332 GLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNC 391
+ P Y Y +++ + + + M+H G + + + +ALI
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDV--------RMLHCGIIKE---GLESDVFVRSALIDVFA 205
Query: 392 LLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVD 451
LG E+AL + M ++ D + +N +I GF + A EL M AG I +
Sbjct: 206 KLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI--AE 259
Query: 452 LAVFSSLMKGLS--------------------DEVNYNSVINAYCAEGEVSKALILHDEM 491
A +S+++ + D + N++++ YC G + AL + ++M
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 492 EHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLI 543
+ R + + + G + G + L++F + +S Y T++
Sbjct: 320 KE----RDVITWSTMISGLAQN----GYSQEALKLFERMKSSGTKPNYITIV 363
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 151/383 (39%), Gaps = 76/383 (19%)
Query: 89 SGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEE 148
+G P + NVL++ Y + +++A + M + NV+S+ T+I + ++A E
Sbjct: 90 NGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALE 148
Query: 149 LLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLL 208
LL M + P+ TY++++ + + +++ + + + + + V ++LI +
Sbjct: 149 LLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVR----SALIDVF 204
Query: 209 CTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP-- 265
+ A VF EM+ + +N +I + R A+ +F+ M G
Sbjct: 205 AKLGEPEDALSVFDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 266 -------------------------------DAVICNTLITFFCKYGELEKAFEMRAEMV 294
D ++ N L+ +CK G LE A + +M
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK 320
Query: 295 ERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFS 354
ER ++ T+S +I L EA LF M G P Y +VG F+
Sbjct: 321 ERDVI----TWSTMISGLAQNGYSQEALKLFERMKSSGTKPN---YITIVGVL-----FA 368
Query: 355 KAFHLRDEMIHKGFLPDFVTEF---------SPSLVTYNALIYGNCLLGRVEEALGILRG 405
+ H G L D F P Y +I G++++A+ +L
Sbjct: 369 CS--------HAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN- 419
Query: 406 MAEMSLSPDDVSYNIVISGFCKL 428
EM PD V++ ++ G C++
Sbjct: 420 --EMECEPDAVTWRTLL-GACRV 439
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 182/436 (41%), Gaps = 62/436 (14%)
Query: 93 PSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQE 152
P V T + ++A C R++ A + M+ +VV++NT+I+ C + EA +L +E
Sbjct: 146 PFVETGFMDMYASC--GRINYARNVFDEMS-HRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 153 MNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYN 212
M + PD + +++A + N+ A+Y+ + + + + T+L+ +
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNR-AIYEFLIENDVRMDTHLLTALVTMYAGAG 261
Query: 213 -VDKAYKVFTEM----------IASGF-----------------EPSLVTYNELIHAYCC 244
+D A + F +M + SG+ + LV + +I AY
Sbjct: 262 CMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVE 321
Query: 245 RDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADT 304
D Q+A+ +F M G+ PD V ++I+ G L+KA + + + G+
Sbjct: 322 SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI 381
Query: 305 YSKLIDCLCPQRRLSEAFDLFREMLGGGLSPRE--YAYFNLVGAYCLVGEFSKAFHLRDE 362
+ LI+ L D+F +M PR ++ +++ A + GE S A L
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKM------PRRNVVSWSSMINALSMHGEASDALSLFAR 435
Query: 363 MIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGMA-EMSLSPDDVSYNIV 421
M + P+ VT+ ++YG G VEE I M E +++P Y +
Sbjct: 436 MKQEN--------VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCM 487
Query: 422 ISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEV 481
+ F + L +A E++ M A + ++ SLM I+ G+
Sbjct: 488 VDLFGRANLLREALEVIESMPVASNV-----VIWGSLMSACR--------IHGELELGKF 534
Query: 482 SKALILHDEMEHHGSL 497
+ IL E +H G+L
Sbjct: 535 AAKRILELEPDHDGAL 550
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 160/422 (37%), Gaps = 56/422 (13%)
Query: 114 AMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMS 173
A+ + + P + FN + L + Q + G D ++ ++ A+S
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 174 KNTNLVIRAIALYDQMKQQRIPVPWTTY------TSLIHLLCTY-NVDKAYKVFTEMIAS 226
K + AL++ M+ + T T + + + ++ A VF EM
Sbjct: 123 KVS-------ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS-- 173
Query: 227 GFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKA 286
+VT+N +I YC V +A +F M D + PD +I +++ + G +
Sbjct: 174 --HRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ ++E + DT+ L+ L + D+ RE R+ + NL +
Sbjct: 232 RAIYEFLIENDV--RMDTH--LLTALVTMYAGAGCMDMAREFF------RKMSVRNLFVS 281
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGM 406
+V +SK L D + F LV + +I +EAL + M
Sbjct: 282 TAMVSGYSKCGRLDDAQV------IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 407 AEMSLSPDDVSYNIVISGFCKLGELGKA-----------FELMVEMDEA--------GGI 447
+ PD VS VIS LG L KA E + ++ A GG+
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 448 RGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
VF + + + V+++S+INA GE S AL L M+ V ++ +
Sbjct: 396 DATR-DVFEKMPR--RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVL 452
Query: 508 DG 509
G
Sbjct: 453 YG 454
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 183/452 (40%), Gaps = 50/452 (11%)
Query: 81 KVLSEMVNSGFL--PSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLC 138
++ ++M+ +G + P ++ + A + +D ++ IL+G+ PN+ S+N I G
Sbjct: 71 QIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIE-NPNIFSWNVTIRGFS 129
Query: 139 AKRRIKEAEELLQEMNSKGLA---PDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIP 195
KE+ L ++M G PD TY L + + L + + + R+
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA-DLRLSSLGHMILGHVLKLRLE 188
Query: 196 VPWTTYTSLIHLLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGI 254
+ + + IH+ + +++ A KVF E LV++N LI+ Y + A+ +
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVR----DLVSWNCLINGYKKIGEAEKAIYV 244
Query: 255 FRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCP 314
++ M G+ PD V L++ G+L + E + E G+ + L+D
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSK 304
Query: 315 QRRLSEAFDLFREMLGGGLSPRE-YAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFV 373
+ EA +F L R ++ ++ Y G + L D+M K
Sbjct: 305 CGDIHEARRIF-----DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK------- 352
Query: 374 TEFSPSLVTYNALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGK 433
+V +NA+I G+ R ++AL + + M + PD+++ +S +LG L
Sbjct: 353 -----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 434 AFEL------------------MVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAY 475
+ +V+M G L+VF + + + Y ++I
Sbjct: 408 GIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT--RNSLTYTAIIGGL 465
Query: 476 CAEGEVSKALILHDEMEHHGSLRASVLYIMLF 507
G+ S A+ +EM G + +I L
Sbjct: 466 ALHGDASTAISYFNEMIDAGIAPDEITFIGLL 497
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 171/417 (41%), Gaps = 83/417 (19%)
Query: 77 DNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGM---AVEPNVVSFNTV 133
+NA KV E + + ++N L++ Y + ++A+ + + M V+P+ V+ +
Sbjct: 208 ENARKVFDE----SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGL 263
Query: 134 IDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNTNLVIRAIALYDQMKQQR 193
+ + +E + + GL N L+ SK + + A ++D ++++
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGD-IHEARRIFDNLEKRT 322
Query: 194 IPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
I V WTT S + C +D + K+F +M E +V +N +I R QDA+
Sbjct: 323 I-VSWTTMIS-GYARCGL-LDVSRKLFDDM----EEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 254 IFRGMPDRGLTPDAV-----------------------------------ICNTLITFFC 278
+F+ M PD + + +L+ +
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYA 435
Query: 279 KYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREY 338
K G + +A + + R N+ TY+ +I L S A F EM+ G++P E
Sbjct: 436 KCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEI 491
Query: 339 AYFNLVGAYCLVGEFSKAFHLRDEMIHKG--FLPDFVTEF--SPSLVTYNALIYGNCLLG 394
+ L+ A C G MI G + + F +P L Y+ ++ LLG
Sbjct: 492 TFIGLLSACCHGG-----------MIQTGRDYFSQMKSRFNLNPQLKHYSIMVD---LLG 537
Query: 395 R---VEEALGILRGMAEMSLSPDDVSYNIVISGFCKLG---ELG-KAFELMVEMDEA 444
R +EEA R M M + D + ++ G C++ ELG KA + ++E+D +
Sbjct: 538 RAGLLEEA---DRLMESMPMEADAAVWGALLFG-CRMHGNVELGEKAAKKLLELDPS 590
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 139/354 (39%), Gaps = 24/354 (6%)
Query: 94 SVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVID---GLCAKRRIKEAEELL 150
S TYN L R V E ++ M + +T I R + E +L
Sbjct: 262 STVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLY 321
Query: 151 QEMNSKGLAPDSVTYNTLITAMSKNTN----LVIRAIALYDQMKQQRIPVPWTTYTSLIH 206
+ M P + L+ +S + N LV R Y+ + + Y +
Sbjct: 322 EYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKS---LSKAVYDGIHR 378
Query: 207 LLCTY-NVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP 265
L + D+A ++ M +G+EP +TY++L+ C R+++A G+ M +G P
Sbjct: 379 SLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFP 438
Query: 266 DAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLF 325
D LI CK EL+KA A M+E+G +++ LID + A
Sbjct: 439 DIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFL 498
Query: 326 REML-GGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYN 384
EM+ + P + Y L+ + + +A L +M+ K P + F L +
Sbjct: 499 MEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLL-QMMKKQNYPAYAEAFDGYLAKF- 556
Query: 385 ALIYGNCLLGRVEEALGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELM 438
G +E+A L ++ SP +Y VI F + G L A L+
Sbjct: 557 ---------GTLEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 152/406 (37%), Gaps = 70/406 (17%)
Query: 57 GLDPARE--SLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEA 114
GL P+ S++ + Q + L EM GF TY + ++K +A
Sbjct: 118 GLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADA 177
Query: 115 MGILR---------GMAVEPNVVS-FNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVT 164
+ + M+V VS T D C E E LQEM K + D
Sbjct: 178 VAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSC------EVERELQEM--KLVLSD--- 226
Query: 165 YNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPW----TTYTSLIHLLCTYN-VDKAYKV 219
N +I + + ++A+A + + + TY + + +L N V + + V
Sbjct: 227 -NFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSV 285
Query: 220 FTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCK 279
EM +G++ L TY ++ + + + + ++ M D P C+ L+ +
Sbjct: 286 VDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSG 345
Query: 280 YGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYA 339
PN D L F + R+ G S +
Sbjct: 346 S-------------------PNPD--------------LDLVFRVSRKYESTGKSLSKAV 372
Query: 340 YFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEA 399
Y + + VG F +A + M + G+ PD +T Y+ L++G C R+EEA
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNIT--------YSQLVFGLCKAKRLEEA 424
Query: 400 LGILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAG 445
G+L M PD ++ I+I G CK EL KA M E G
Sbjct: 425 RGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKG 470
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 93/241 (38%), Gaps = 41/241 (17%)
Query: 52 EMNRKGLDPARESLIHLLCCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKRV 111
E K L A IH + D A ++ M N+G+ P TY+ L+ C+ KR+
Sbjct: 362 ESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRL 421
Query: 112 DEAMGILRGMAVE---PNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTL 168
+EA G+L M + P++ ++ +I G C + +A M KG DS + L
Sbjct: 422 EEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVL 481
Query: 169 ITA----------------MSKNTN---------LVI----------RAIALYDQMKQQR 193
I M KN N L+I A+ L MK+Q
Sbjct: 482 IDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQN 541
Query: 194 IPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIHAYCCRDRVQDAMG 253
P + L + + K F ++++S PS Y +I A+ R+ DA
Sbjct: 542 YPAYAEAFDG---YLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKN 598
Query: 254 I 254
+
Sbjct: 599 L 599
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 111/563 (19%), Positives = 220/563 (39%), Gaps = 75/563 (13%)
Query: 117 ILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLITAMSKNT 176
+LR + P+ ++ ++ L +R +K L+EM G D TY T+ +SK
Sbjct: 113 VLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEK 172
Query: 177 NLV--IRAIALYDQM-KQQRIPVPWTTYTSLI---HLLCTYNVDKAYKVFTEMIASGFEP 230
+ + Y++M K+ + V ++++ C V++ + +++ F
Sbjct: 173 SKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSC--EVERELQEMKLVLSDNF-- 228
Query: 231 SLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTP----DAVICNTLITFFCKYGELEKA 286
+ EL R+ A+ F + G + V N + + + +
Sbjct: 229 VIRVLKEL------REHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEF 282
Query: 287 FEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVGA 346
+ + EM G + DTY K+ R ++E L+ M+ G P ++
Sbjct: 283 WSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKP------SIQDC 336
Query: 347 YCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRGM 406
L+ S + + +++ + T S S Y+ + +GR +EA I + M
Sbjct: 337 SLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAM 396
Query: 407 AEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEV 466
PD+++Y+ ++ G CK L +A ++ +M+ G D+ ++ L++G
Sbjct: 397 RNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF--PDIKTWTILIQG----- 449
Query: 467 NYNSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRM 526
+C E+ KAL M G S L +L DGF + GA L+ M
Sbjct: 450 --------HCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEM 501
Query: 527 FYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKGFGMRGLKNEAASVLNTVLQWNYKP-- 584
+ TY LI+ ++++ K EA +L + + NY
Sbjct: 502 VKNANVKPWQSTYKLLIDK--------LLKIKKS-------EEALDLLQMMKKQNYPAYA 546
Query: 585 ---DGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEVR 641
DG + F +E ++ +++++ + + +I+A + GR + +
Sbjct: 547 EAFDGYLAKFGTLEDAKK---------FLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAK 597
Query: 642 RVIQNVLRSCNINGFELHKALSE 664
N+L C + F+ H +SE
Sbjct: 598 ----NLLFICP-HHFKTHPKISE 615
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 210/509 (41%), Gaps = 94/509 (18%)
Query: 53 MNRKGLDPARESLIHLL--CCDQLQNDNAYKVLSEMVNSGFLPSVATYNVLLHAYCRDKR 110
M ++P + +LL C D+ + ++ +V SGF + L + Y + ++
Sbjct: 126 MRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQ 185
Query: 111 VDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAPDSVTYNTLIT 170
V+EA + M E ++VS+NT++ G + A E+++ M + L P +T +++
Sbjct: 186 VNEARKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLP 244
Query: 171 AMSKNTNLVIRAIALYDQMKQQRIPVPWTTY----TSLIHLLCTY-NVDKAYKVFTEMIA 225
A+S +R I++ ++ + + + T+L+ + +++ A ++F M+
Sbjct: 245 AVS-----ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML- 298
Query: 226 SGFEPSLVTYNELIHAYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEK 285
E ++V++N +I AY + ++AM IF+ M D G+ P V + G+LE+
Sbjct: 299 ---ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 286 AFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSEAFDLFREMLGGGLSPREYAYFNLVG 345
+ VE G+ N + LI C + + A +F G L R
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF-----GKLQSR--------- 401
Query: 346 AYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEALGILRG 405
+LV++NA+I G GR +AL
Sbjct: 402 ---------------------------------TLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 406 MAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDE 465
M ++ PD +Y VI+ +L A I GV +M+ D+
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELS----------ITHHAKWIHGV-------VMRSCLDK 471
Query: 466 VNY--NSVINAYCAEGEVSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESL 523
+ ++++ Y G + A ++ D M S R + + DG+ T G ++
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMM----SERHVTTWNAMIDGYG----THGFGKAA 523
Query: 524 LRMFYDL--CTSLPT-FTYDTLIENCSNN 549
L +F ++ T P T+ ++I CS++
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHS 552